Query psy16273
Match_columns 227
No_of_seqs 217 out of 1369
Neff 5.1
Searched_HMMs 29240
Date Fri Aug 16 17:13:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16273.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16273hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2klr_A Alpha-crystallin B chai 100.0 4.2E-29 1.4E-33 210.3 12.0 147 70-227 8-163 (175)
2 3l1e_A Alpha-crystallin A chai 99.9 1.2E-24 4E-29 168.8 13.7 89 138-226 11-105 (106)
3 2wj5_A Heat shock protein beta 99.9 3E-23 1E-27 159.4 13.1 88 138-226 10-99 (101)
4 4eld_A MJ16.5-P1, small heat s 99.9 5.4E-24 1.9E-28 175.3 8.6 131 86-226 12-161 (161)
5 3q9p_A Heat shock protein beta 99.9 1.5E-22 5E-27 151.1 11.7 77 138-214 6-84 (85)
6 2y1y_A Alpha-crystallin B chai 99.9 4.2E-22 1.4E-26 149.8 12.1 83 138-221 5-89 (90)
7 1gme_A Heat shock protein 16.9 99.8 4.1E-21 1.4E-25 157.2 10.5 87 139-226 53-150 (151)
8 3gla_A Low molecular weight he 99.8 8.4E-20 2.9E-24 138.5 10.8 88 120-216 3-99 (100)
9 4fei_A Heat shock protein-rela 99.8 1E-19 3.6E-24 139.4 11.5 89 120-217 5-97 (102)
10 3aab_A Putative uncharacterize 99.8 9E-20 3.1E-24 143.8 9.1 93 121-226 24-123 (123)
11 2bol_A TSP36, small heat shock 99.8 5.8E-19 2E-23 160.5 10.5 84 140-225 113-197 (314)
12 2bol_A TSP36, small heat shock 99.7 4.4E-17 1.5E-21 148.1 9.0 76 138-214 232-313 (314)
13 1rl1_A Suppressor of G2 allele 98.2 5.4E-06 1.9E-10 63.5 8.4 70 139-216 19-89 (114)
14 2xcm_C SGT1-like protein, cyto 98.1 5.1E-06 1.7E-10 60.9 6.8 70 139-216 12-82 (92)
15 3igf_A ALL4481 protein; two-do 96.9 0.0024 8.2E-08 58.7 8.0 60 140-212 306-367 (374)
16 2k8q_A Protein SHQ1; beta-sand 95.0 0.035 1.2E-06 44.7 5.5 66 139-216 13-83 (134)
17 1x5m_A Calcyclin-binding prote 94.2 0.3 1E-05 37.8 9.1 70 139-216 30-104 (127)
18 3eud_A Protein SHQ1; CS domain 94.1 0.48 1.7E-05 37.2 10.0 67 139-217 27-98 (115)
19 1wgv_A KIAA1068 protein; CS do 93.1 0.81 2.8E-05 35.2 9.8 70 139-216 29-102 (124)
20 1ejf_A Progesterone receptor P 92.6 0.4 1.4E-05 37.0 7.3 69 139-216 13-82 (125)
21 1wh0_A Ubiquitin carboxyl-term 92.2 0.37 1.3E-05 38.2 6.8 77 139-216 30-112 (134)
22 3qor_A Nuclear migration prote 91.9 0.49 1.7E-05 36.4 7.0 67 139-216 26-97 (121)
23 2cg9_X CO-chaperone protein SB 90.6 0.3 1E-05 38.4 4.7 74 139-216 23-98 (134)
24 1wfi_A Nuclear distribution ge 90.3 0.43 1.5E-05 37.0 5.3 67 139-216 17-88 (131)
25 2rh0_A NUDC domain-containing 90.1 1.5 5.1E-05 35.4 8.6 66 139-216 23-91 (157)
26 2o30_A Nuclear movement protei 89.8 0.94 3.2E-05 35.2 6.9 65 139-215 14-80 (131)
27 2kmw_A Uncharacterized protein 69.8 7.4 0.00025 31.0 5.4 67 139-216 14-82 (150)
28 3q9p_A Heat shock protein beta 67.7 7.6 0.00026 27.6 4.6 35 180-216 7-41 (85)
29 3gla_A Low molecular weight he 61.4 12 0.00041 26.9 4.7 35 180-216 14-48 (100)
30 4fei_A Heat shock protein-rela 61.4 12 0.0004 27.4 4.7 34 180-215 16-49 (102)
31 2y1y_A Alpha-crystallin B chai 59.8 10 0.00035 27.1 4.0 33 181-215 7-39 (90)
32 2wj5_A Heat shock protein beta 58.0 11 0.00038 27.6 4.0 34 180-215 11-44 (101)
33 3aab_A Putative uncharacterize 52.3 23 0.00079 26.6 5.1 34 181-216 35-69 (123)
34 3l1e_A Alpha-crystallin A chai 51.8 18 0.00063 26.7 4.4 33 180-214 12-44 (106)
35 2ks0_A Uncharacterized protein 49.3 8.8 0.0003 27.4 2.1 24 146-169 14-38 (71)
36 4eld_A MJ16.5-P1, small heat s 42.8 34 0.0012 26.9 4.9 32 182-215 68-99 (161)
37 1gme_A Heat shock protein 16.9 40.5 45 0.0015 26.1 5.3 35 181-216 54-88 (151)
38 2klr_A Alpha-crystallin B chai 38.9 29 0.001 28.2 4.0 34 180-215 73-106 (175)
39 1rl6_A Protein (ribosomal prot 38.5 28 0.00097 28.6 3.9 45 152-214 11-56 (177)
40 1nkw_E 50S ribosomal protein L 36.5 33 0.0011 29.2 4.0 45 152-214 39-84 (212)
41 1q5l_A Chaperone protein DNAK; 35.4 30 0.001 26.7 3.4 36 190-226 95-130 (135)
42 3v2d_H 50S ribosomal protein L 34.9 37 0.0013 27.9 4.0 43 152-212 12-55 (180)
43 2cql_A OK/SW-CL.103, 60S ribos 33.2 23 0.00078 26.5 2.3 19 152-170 20-39 (100)
44 3h0x_A 78 kDa glucose-regulate 29.1 45 0.0015 26.2 3.5 36 189-225 77-112 (152)
45 3dqg_A Heat shock 70 kDa prote 28.4 48 0.0016 26.1 3.6 36 189-225 77-112 (151)
46 3dob_A Heat shock 70 kDa prote 28.3 46 0.0016 26.2 3.4 37 189-226 77-113 (152)
47 3bbo_I Ribosomal protein L6; l 28.2 26 0.00089 30.1 2.0 46 152-214 54-100 (223)
48 2op6_A Heat shock 70 kDa prote 27.8 48 0.0016 25.7 3.4 37 189-226 77-113 (152)
49 1vq8_E 50S ribosomal protein L 27.2 59 0.002 26.8 4.0 46 152-214 9-55 (178)
50 3n8e_A Stress-70 protein, mito 26.2 51 0.0017 26.9 3.4 37 189-226 97-133 (182)
51 3e5a_B Targeting protein for X 22.3 19 0.00067 23.4 0.1 11 1-11 2-12 (44)
52 4e81_A Chaperone protein DNAK; 22.2 64 0.0022 26.9 3.3 37 189-226 78-114 (219)
No 1
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.96 E-value=4.2e-29 Score=210.28 Aligned_cols=147 Identities=25% Similarity=0.362 Sum_probs=72.9
Q ss_pred HHHhhhhhhhcccCCCCcccccccCCCCChhhhhhhhhhhcccCCCCCccccCCCC----c-cccccC--CCCCCcceeE
Q psy16273 70 EEFQKLSYLICSVGNSNNLLITHYGSTFYYFFRLQSFRAQLDIGTHSTFTYSTETG----L-SLVDAN--CSTSLWAKSK 142 (227)
Q Consensus 70 p~l~r~~~~~~~~~~psrL~dp~Fgs~l~~D~L~~~~~~~~r~~~~~~~~~~pP~~----i-~~~~~e--~~~s~~~~y~ 142 (227)
|+++|.||+... |+||||++||.++..++++..+... .++|+++. . ...... .-.++.+.|.
T Consensus 8 ~~~~~~~~~~~~---~~rl~d~~fg~~~~~~~l~~~~~~~--------~~~~~~~~~~~r~~~~~~~~~~dv~e~~d~~~ 76 (175)
T 2klr_A 8 PWIRRPFFPFHS---PSRLFDQFFGEHLLESDLFPTSTSL--------SPFYLRPPSFLRAPSWFDTGLSEMRLEKDRFS 76 (175)
T ss_dssp ------------------------------------------------------------------------CCCCSEEE
T ss_pred CcccCccccccC---CcchhhhhcCCCCChhhhccccccc--------CccccCchhhccccccccCCceEEEEcCCeEE
Confidence 889998777543 8999999999999988886544211 12333321 0 000000 0122358999
Q ss_pred EEEecCCCCCCceEEEe-CCeEEEEEEEeeecCC-CeeeeEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCCCCCCCC
Q psy16273 143 SHYPFRLWSAAEYSFKS-HTPVTVHAKHEEKSDS-KSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPALGAPE 220 (227)
Q Consensus 143 I~ldvpGF~pedI~V~v-~n~L~V~Gk~e~~~d~-~~~~R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~~~e~~~ 220 (227)
|.+|||||+||||+|++ +|.|+|+|+++++.++ +|..|+|.|+|.||++||.++|+|+|++||||+|++||...+.++
T Consensus 77 v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~~LP~~Vd~~~i~A~~s~dGvL~I~lPK~~~~~~~ 156 (175)
T 2klr_A 77 VNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVNGPRKQVSGPE 156 (175)
T ss_dssp EEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEEECTTTCCTTTCEEEECTTSCEEEEEECC------
T ss_pred EEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEEECCCCcChhHeEEEEcCCCEEEEEEECCCCCCCC
Confidence 99999999999999999 9999999999876544 488999999999999999999999997799999999998754457
Q ss_pred eeeccCC
Q psy16273 221 KLIPIAH 227 (227)
Q Consensus 221 R~I~I~~ 227 (227)
|+|+|++
T Consensus 157 r~I~I~~ 163 (175)
T 2klr_A 157 RTIPITR 163 (175)
T ss_dssp -------
T ss_pred eEEEEec
Confidence 9999963
No 2
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.92 E-value=1.2e-24 Score=168.76 Aligned_cols=89 Identities=29% Similarity=0.505 Sum_probs=81.7
Q ss_pred cceeEEEEecCCCCCCceEEEe-CCeEEEEEEEeeecCC-CeeeeEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCCC
Q psy16273 138 WAKSKSHYPFRLWSAAEYSFKS-HTPVTVHAKHEEKSDS-KSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPA 215 (227)
Q Consensus 138 ~~~y~I~ldvpGF~pedI~V~v-~n~L~V~Gk~e~~~d~-~~~~R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~~ 215 (227)
.+.|.|.+|||||+|+||+|++ +|.|+|+|+++++.++ +|..|+|.|+|.||++||+++|+|+|++||+|+|++||..
T Consensus 11 ~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~~GvL~I~~PK~~ 90 (106)
T 3l1e_A 11 RDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRYRLPSNVDQSALSCSLSADGMLTFSGPKIP 90 (106)
T ss_dssp SSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEEECCTTBCTTSCEEEECTTSEEEEEEEBCC
T ss_pred CCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEEccC
Confidence 3889999999999999999999 9999999998776555 4888999999999999999999999988999999999998
Q ss_pred CC----CCCeeeccC
Q psy16273 216 LG----APEKLIPIA 226 (227)
Q Consensus 216 ~e----~~~R~I~I~ 226 (227)
++ .++|+|+|+
T Consensus 91 ~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 91 SGVDAGHSERAIPVS 105 (106)
T ss_dssp CCTTTTSSSCCCCCC
T ss_pred cccccCCCCeEeeec
Confidence 74 389999997
No 3
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.90 E-value=3e-23 Score=159.38 Aligned_cols=88 Identities=32% Similarity=0.467 Sum_probs=77.0
Q ss_pred cceeEEEEecCCCCCCceEEEe-CCeEEEEEEEeeecCC-CeeeeEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCCC
Q psy16273 138 WAKSKSHYPFRLWSAAEYSFKS-HTPVTVHAKHEEKSDS-KSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPA 215 (227)
Q Consensus 138 ~~~y~I~ldvpGF~pedI~V~v-~n~L~V~Gk~e~~~d~-~~~~R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~~ 215 (227)
.+.|.|.+|||||+++||+|++ +|.|+|+|+++.+.++ +|..|+|.|+|.||++||+++|+|+|++||+|+|++||..
T Consensus 10 ~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~~LP~~vd~~~i~A~~s~nGvL~I~lPK~~ 89 (101)
T 2wj5_A 10 PGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRYRLPPGVDPAAVTSALSPEGVLSIQATPAS 89 (101)
T ss_dssp SSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEEECCTTBCTTCCEEEECTTSEEEEEECBCC
T ss_pred CCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHCEEEECCCCEEEEEEECCC
Confidence 3789999999999999999999 9999999999876544 4888999999999999999999999977999999999987
Q ss_pred CCCCCeeeccC
Q psy16273 216 LGAPEKLIPIA 226 (227)
Q Consensus 216 ~e~~~R~I~I~ 226 (227)
+ .+||.++|.
T Consensus 90 ~-~~~~~~~i~ 99 (101)
T 2wj5_A 90 A-QASLPSPPA 99 (101)
T ss_dssp C-CCSSCC---
T ss_pred c-CCCCCCccc
Confidence 5 567777763
No 4
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.90 E-value=5.4e-24 Score=175.29 Aligned_cols=131 Identities=15% Similarity=0.076 Sum_probs=81.5
Q ss_pred CcccccccCCCCChhhhhhhhh----hhcc--cCCC---CCccccCCCCccccccCCCCCCcceeEEEEecCCCCCCceE
Q psy16273 86 NNLLITHYGSTFYYFFRLQSFR----AQLD--IGTH---STFTYSTETGLSLVDANCSTSLWAKSKSHYPFRLWSAAEYS 156 (227)
Q Consensus 86 srL~dp~Fgs~l~~D~L~~~~~----~~~r--~~~~---~~~~~~pP~~i~~~~~e~~~s~~~~y~I~ldvpGF~pedI~ 156 (227)
+|+|+++|+..++......... ++.. .... .....|+|.++.+. .+.|.|.+|||||++|||+
T Consensus 12 ~r~~~~~f~~~~~~~~~~~~~~~~p~~~~~~p~~a~~~~~~~~~~~pvdi~e~--------~~~~~v~~dlPG~~~edi~ 83 (161)
T 4eld_A 12 ERMFKEFFATPMTGTTMIQSSTPLPPAAIESPAVAAGIQISGKGFMPISIIEG--------DQHIKVIAWLPGVNKEDII 83 (161)
T ss_dssp ---------------------------------CCCCCEEEEESCCCEEEEEC--------SSEEEEEEECTTCCGGGEE
T ss_pred HHHHHHHhCCCCccccccCCcccCCcccccCccccccccccCCcccceeEEEe--------CCEEEEEEECCCCChHhEE
Confidence 5788999988876654332211 0000 0000 01134666544331 2789999999999999999
Q ss_pred EEe-CCeEEEEEEEeeec---CCCe------eeeEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCCCCCCCCeeeccC
Q psy16273 157 FKS-HTPVTVHAKHEEKS---DSKS------VYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPIA 226 (227)
Q Consensus 157 V~v-~n~L~V~Gk~e~~~---d~~~------~~R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~~~e~~~R~I~I~ 226 (227)
|++ +|.|+|+|+++... +++| .++.|.|+|.||++||.++|+|+| +||||+|++||.+. .++|+|+|+
T Consensus 84 V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~i~A~~-~nGvL~I~lpK~~~-~~~r~I~Ie 161 (161)
T 4eld_A 84 LNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEENASAKF-ENGVLSVILPKAES-SIKKGINIE 161 (161)
T ss_dssp EEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGGCEEEE-ETTEEEEEEEBCGG-GSCCCCCCC
T ss_pred EEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCcccccEEEEE-ECCEEEEEEEcCCC-CCCcEeecC
Confidence 999 99999999987632 2223 234899999999999999999999 89999999999874 579999995
No 5
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.88 E-value=1.5e-22 Score=151.14 Aligned_cols=77 Identities=31% Similarity=0.562 Sum_probs=67.4
Q ss_pred cceeEEEEecCCCCCCceEEEe-CCeEEEEEEEeeecCC-CeeeeEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCC
Q psy16273 138 WAKSKSHYPFRLWSAAEYSFKS-HTPVTVHAKHEEKSDS-KSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLP 214 (227)
Q Consensus 138 ~~~y~I~ldvpGF~pedI~V~v-~n~L~V~Gk~e~~~d~-~~~~R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~ 214 (227)
.+.|.|.+|||||+|+||+|++ +|.|+|+|+++.+.++ ++.+++|.|+|.||++||+++|+|+|.+||+|+|++||.
T Consensus 6 ~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~~LP~~vd~~~i~A~~~~~GvL~I~lPK~ 84 (85)
T 3q9p_A 6 ADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKYTLPPGVDPTQVSSSLSPEGTLTVEAPMP 84 (85)
T ss_dssp CCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEEECCTTCCGGGCEEEECTTSEEEEEEECC
T ss_pred CCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEEECCCCcChHHcEEEECCCCEEEEEEEcC
Confidence 4889999999999999999999 9999999998765544 478899999999999999999999994499999999995
No 6
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.88 E-value=4.2e-22 Score=149.79 Aligned_cols=83 Identities=31% Similarity=0.515 Sum_probs=71.1
Q ss_pred cceeEEEEecCCCCCCceEEEe-CCeEEEEEEEeeecCC-CeeeeEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCCC
Q psy16273 138 WAKSKSHYPFRLWSAAEYSFKS-HTPVTVHAKHEEKSDS-KSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPA 215 (227)
Q Consensus 138 ~~~y~I~ldvpGF~pedI~V~v-~n~L~V~Gk~e~~~d~-~~~~R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~~ 215 (227)
.+.|.|.+|||||+++||+|++ ++.|+|+|+++...++ +|..++|.|+|.||++||+++|+|+|++||+|+|++||..
T Consensus 5 ~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~~LP~~vd~~~i~A~~~~~GvL~I~~pK~~ 84 (90)
T 2y1y_A 5 KDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSMSSDGVLTVNGPRKQ 84 (90)
T ss_dssp -CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEEECCTTBCGGGCEEEECTTSEEEEEECBC-
T ss_pred CCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEEECCCCcChhHcEEEECCCCEEEEEEEcCC
Confidence 4789999999999999999999 9999999998776544 4888999999999999999999999977999999999987
Q ss_pred CCCCCe
Q psy16273 216 LGAPEK 221 (227)
Q Consensus 216 ~e~~~R 221 (227)
+ .+||
T Consensus 85 ~-~~p~ 89 (90)
T 2y1y_A 85 V-SGPE 89 (90)
T ss_dssp ------
T ss_pred C-CCCC
Confidence 5 4454
No 7
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.85 E-value=4.1e-21 Score=157.24 Aligned_cols=87 Identities=21% Similarity=0.259 Sum_probs=75.0
Q ss_pred ceeEEEEecCCCCCCceEEEe-C-CeEEEEEEEeeecCC---Cee-----eeEEEEEEeCCCCCCcCCcEEEecCCCEEE
Q psy16273 139 AKSKSHYPFRLWSAAEYSFKS-H-TPVTVHAKHEEKSDS---KSV-----YREYNREFLLPKGTNPESIKSSLSKDGVLT 208 (227)
Q Consensus 139 ~~y~I~ldvpGF~pedI~V~v-~-n~L~V~Gk~e~~~d~---~~~-----~R~F~R~f~LP~~VD~~~I~AsLs~nGvLt 208 (227)
+.|.|.++||||+++||+|++ + +.|+|+|++..+.++ +|. ++.|.|+|.||++||.++|+|+| +||+|+
T Consensus 53 d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~-~nGvL~ 131 (151)
T 1gme_A 53 EAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVEEVKAGL-ENGVLT 131 (151)
T ss_dssp SEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGGGCEEEE-ETTEEE
T ss_pred CEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCccccceEEEE-ECCEEE
Confidence 789999999999999999999 5 799999998764322 243 46799999999999999999999 999999
Q ss_pred EEEeCCCCC-CCCeeeccC
Q psy16273 209 VEAPLPALG-APEKLIPIA 226 (227)
Q Consensus 209 I~lPk~~~e-~~~R~I~I~ 226 (227)
|++||..++ .+.|+|+|+
T Consensus 132 I~lPK~~~~~~~~~~I~I~ 150 (151)
T 1gme_A 132 VTVPKAEVKKPEVKAIQIS 150 (151)
T ss_dssp EEEECCCCCTTCCCCCCCC
T ss_pred EEEEccCcCCCCCeEeeeC
Confidence 999998764 356889886
No 8
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.82 E-value=8.4e-20 Score=138.52 Aligned_cols=88 Identities=13% Similarity=0.259 Sum_probs=72.6
Q ss_pred ccCCCCccccccCCCCCCcceeEEEEecCCCCCCceEEEe-CCeEEEEEEEeeecCC---Cee-----eeEEEEEEeCCC
Q psy16273 120 YSTETGLSLVDANCSTSLWAKSKSHYPFRLWSAAEYSFKS-HTPVTVHAKHEEKSDS---KSV-----YREYNREFLLPK 190 (227)
Q Consensus 120 ~~pP~~i~~~~~e~~~s~~~~y~I~ldvpGF~pedI~V~v-~n~L~V~Gk~e~~~d~---~~~-----~R~F~R~f~LP~ 190 (227)
+.|++++.+. .+.|.|.++||||+++||+|++ +|.|+|+|++...... +|. ++.|.|+|.||.
T Consensus 3 ~~P~~di~e~--------~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~ 74 (100)
T 3gla_A 3 WVPRVDIKEE--------VNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRFALPD 74 (100)
T ss_dssp SCCCEEEEEC--------SSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCT
T ss_pred ccCcEEEEEC--------CCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCC
Confidence 4566666532 2789999999999999999999 9999999998764322 242 457999999999
Q ss_pred CCCcCCcEEEecCCCEEEEEEeCCCC
Q psy16273 191 GTNPESIKSSLSKDGVLTVEAPLPAL 216 (227)
Q Consensus 191 ~VD~~~I~AsLs~nGvLtI~lPk~~~ 216 (227)
+||+++|+|+| +||+|+|++||.++
T Consensus 75 ~vd~~~i~A~~-~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 75 SADADGITAAG-RNGVLEIRIPKRPA 99 (100)
T ss_dssp TBCTTSCEEEE-ETTEEEEEEEBC--
T ss_pred CcChHHeEEEE-eCCEEEEEEecCCC
Confidence 99999999999 89999999999864
No 9
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.82 E-value=1e-19 Score=139.35 Aligned_cols=89 Identities=17% Similarity=0.129 Sum_probs=73.7
Q ss_pred ccCCCCccccccCCCCCCcceeEEEEecCCCCCCceEEEe-CCeEEEEEEEeeecCCC---eeeeEEEEEEeCCCCCCcC
Q psy16273 120 YSTETGLSLVDANCSTSLWAKSKSHYPFRLWSAAEYSFKS-HTPVTVHAKHEEKSDSK---SVYREYNREFLLPKGTNPE 195 (227)
Q Consensus 120 ~~pP~~i~~~~~e~~~s~~~~y~I~ldvpGF~pedI~V~v-~n~L~V~Gk~e~~~d~~---~~~R~F~R~f~LP~~VD~~ 195 (227)
+.||+++.+.+ +.|.|.++||||+++||+|++ +|.|+|+|+++.+..-. ..++.|.|+|.||.+||.+
T Consensus 5 ~~P~~di~e~~--------~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~~LP~~vd~~ 76 (102)
T 4fei_A 5 WTPAADWRDAG--------THLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVRELAFPEPVRPA 76 (102)
T ss_dssp CCCCEEEEEET--------TEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEEECSSCBCTT
T ss_pred ccCcEEEEEcC--------CEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEEECCCCcchh
Confidence 34666664322 779999999999999999999 99999999986432111 2456899999999999999
Q ss_pred CcEEEecCCCEEEEEEeCCCCC
Q psy16273 196 SIKSSLSKDGVLTVEAPLPALG 217 (227)
Q Consensus 196 ~I~AsLs~nGvLtI~lPk~~~e 217 (227)
+|+|+| +||+|+|++||..+.
T Consensus 77 ~i~A~~-~~GvL~I~lpK~~~~ 97 (102)
T 4fei_A 77 SGVASL-AGGVLTVRFEKLRPT 97 (102)
T ss_dssp CCEEEE-ETTEEEEEEEBSSCC
T ss_pred HcEEEE-ECCEEEEEEEccCcc
Confidence 999999 899999999998763
No 10
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.80 E-value=9e-20 Score=143.82 Aligned_cols=93 Identities=10% Similarity=0.093 Sum_probs=77.0
Q ss_pred cCCCCccccccCCCCCCcceeEEEEecCCCCCCceEEEe-C-CeEEEEEEEeeecCCCeeee----EEEEEEeCCCCCCc
Q psy16273 121 STETGLSLVDANCSTSLWAKSKSHYPFRLWSAAEYSFKS-H-TPVTVHAKHEEKSDSKSVYR----EYNREFLLPKGTNP 194 (227)
Q Consensus 121 ~pP~~i~~~~~e~~~s~~~~y~I~ldvpGF~pedI~V~v-~-n~L~V~Gk~e~~~d~~~~~R----~F~R~f~LP~~VD~ 194 (227)
+|++++... .+.|.|.++||||+++||+|++ + +.|+|+|++..+.+.+|..+ .|.|+|.||++||.
T Consensus 24 ~P~~di~e~--------~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~~LP~~vd~ 95 (123)
T 3aab_A 24 YPPVDMYEE--------GGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVIRLPYNVAK 95 (123)
T ss_dssp CSCEEEEEE--------TTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCSEEEEEEECSSEECT
T ss_pred CCcEEEEEc--------CCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeEEEEEEEECCCCcCc
Confidence 456666532 2789999999999999999999 8 99999999876553344332 89999999999999
Q ss_pred CCc-EEEecCCCEEEEEEeCCCCCCCCeeeccC
Q psy16273 195 ESI-KSSLSKDGVLTVEAPLPALGAPEKLIPIA 226 (227)
Q Consensus 195 ~~I-~AsLs~nGvLtI~lPk~~~e~~~R~I~I~ 226 (227)
++| +|+| +||+|+|++||... . + |+|+
T Consensus 96 ~~i~~A~~-~~GvL~I~lPK~~~-~--~-I~Ie 123 (123)
T 3aab_A 96 DAEISGKY-ENGVLTIRIPIAGT-S--V-FKFE 123 (123)
T ss_dssp TCCCEEEE-ETTEEEEEEEGGGE-E--C-SCCC
T ss_pred chhCeeEE-cCCEEEEEEEcCCC-C--c-cccC
Confidence 999 9999 89999999999774 2 2 8774
No 11
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.78 E-value=5.8e-19 Score=160.46 Aligned_cols=84 Identities=21% Similarity=0.359 Sum_probs=73.9
Q ss_pred eeEEEEecCCCCCCceEEEe-CCeEEEEEEEeeecCCCeeeeEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCCCCCC
Q psy16273 140 KSKSHYPFRLWSAAEYSFKS-HTPVTVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPALGA 218 (227)
Q Consensus 140 ~y~I~ldvpGF~pedI~V~v-~n~L~V~Gk~e~~~d~~~~~R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~~~e~ 218 (227)
.|.|.+|||||+||||+|++ +|.|+|+|+++.+.++++.+++|.|+|.||++||+++|+|+|..||||+|++||..++
T Consensus 113 ~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~~r~~g~F~R~~~LP~~Vd~e~i~A~~~~nGVL~I~lPK~~~~- 191 (314)
T 2bol_A 113 HFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGDAAMSESVGRSIPLPPSVDRNHIQATITTDDVLVIEAPVNEPN- 191 (314)
T ss_dssp EEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTCCCBCCCEEEEEECCTTBCGGGCEEEECSSSEEEEEEEBSSCC-
T ss_pred EEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCCCEEEEEEEEEEECCCCccccccEEEEeCCCEEEEEEeccCcc-
Confidence 79999999999999999999 9999999998865555578899999999999999999999993399999999998764
Q ss_pred CCeeecc
Q psy16273 219 PEKLIPI 225 (227)
Q Consensus 219 ~~R~I~I 225 (227)
.+.|+|
T Consensus 192 -~~~I~i 197 (314)
T 2bol_A 192 -YKAIKL 197 (314)
T ss_dssp -TTTEEE
T ss_pred -cceeec
Confidence 233544
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.69 E-value=4.4e-17 Score=148.14 Aligned_cols=76 Identities=21% Similarity=0.329 Sum_probs=65.0
Q ss_pred cceeEEEEec-CCCCCCceEEEe-CCeEEEEEEEeeecCC----CeeeeEEEEEEeCCCCCCcCCcEEEecCCCEEEEEE
Q psy16273 138 WAKSKSHYPF-RLWSAAEYSFKS-HTPVTVHAKHEEKSDS----KSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEA 211 (227)
Q Consensus 138 ~~~y~I~ldv-pGF~pedI~V~v-~n~L~V~Gk~e~~~d~----~~~~R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~l 211 (227)
.+.|.+.++| |||+||||+|++ +|.|+|+|+++.+.++ .+.+++|.|+|.||++||+++|+|+| +||||+|++
T Consensus 232 ~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~~i~A~~-~dGvL~i~~ 310 (314)
T 2bol_A 232 SKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAFVTPEVVDASKTQAEI-VDGLMVVEA 310 (314)
T ss_dssp CEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEEECSSEECGGGCEEEE-ETTEEEEEE
T ss_pred CcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEEECCCCcChHHeEEEE-eCCEEEEEE
Confidence 4789999999 999999999999 9999999998775543 14678999999999999999999999 899999999
Q ss_pred eCC
Q psy16273 212 PLP 214 (227)
Q Consensus 212 Pk~ 214 (227)
||.
T Consensus 311 Pk~ 313 (314)
T 2bol_A 311 PLF 313 (314)
T ss_dssp EEE
T ss_pred ecC
Confidence 985
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=98.21 E-value=5.4e-06 Score=63.47 Aligned_cols=70 Identities=10% Similarity=0.083 Sum_probs=62.0
Q ss_pred ceeEEEEecCCCCCCceEEEe-CCeEEEEEEEeeecCCCeeeeEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCCCC
Q psy16273 139 AKSKSHYPFRLWSAAEYSFKS-HTPVTVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPAL 216 (227)
Q Consensus 139 ~~y~I~ldvpGF~pedI~V~v-~n~L~V~Gk~e~~~d~~~~~R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~~~ 216 (227)
+...|++.+||..++++.|++ ++.|.|+++.. + .+.|...+.|+..||++..++++ .+|.|.|.|+|..+
T Consensus 19 ~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~---~----~~~y~~~~~L~~~I~~e~s~~~~-~~~~l~i~L~K~~~ 89 (114)
T 1rl1_A 19 SQVVITLMIKNVQKNDVNVEFSEKELSALVKLP---S----GEDYNLKLELLHPIIPEQSTFKV-LSTKIEIKLKKPEA 89 (114)
T ss_dssp SEEEEEECCCSCCGGGEEEECSSSCEEEEEECT---T----SSEEEEEECBSSCCCGGGEEEEE-CSSSEEEEEECSSC
T ss_pred CEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeC---C----CcEEEEEeeCCCcCCccccEEEE-ECCEEEEEEEcCCC
Confidence 678999999999999999999 99999998642 1 14688899999999999999999 88999999999875
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=98.14 E-value=5.1e-06 Score=60.90 Aligned_cols=70 Identities=7% Similarity=-0.052 Sum_probs=61.5
Q ss_pred ceeEEEEecCCCCCCceEEEe-CCeEEEEEEEeeecCCCeeeeEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCCCC
Q psy16273 139 AKSKSHYPFRLWSAAEYSFKS-HTPVTVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPAL 216 (227)
Q Consensus 139 ~~y~I~ldvpGF~pedI~V~v-~n~L~V~Gk~e~~~d~~~~~R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~~~ 216 (227)
+...|++.+||..++++.|++ ++.|.|+++.. + .+.|...+.|+..||++..++++ .+|.|.|.|+|..+
T Consensus 12 ~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~---~----~~~y~~~~~L~~~I~~~~s~~~~-~~~~l~i~L~K~~~ 82 (92)
T 2xcm_C 12 EEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVP---G----EDAYYLQPRLFGKIIPDKCKYEV-LSTKIEICLAKADI 82 (92)
T ss_dssp TEEEEEEECCSCCGGGEEEEECSSBEEEEECCT---T----SCCEEECCBBSSCBCGGGCEEEE-CSSCEEEEEEBSSS
T ss_pred CEEEEEEEECCCChHHeEEEEECCEEEEEEEcC---C----CcEEEEeeEcCCccCchhEEEEE-ECCEEEEEEEcCCC
Confidence 668999999999999999999 99999998542 1 14688889999999999999999 79999999999875
No 15
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=96.89 E-value=0.0024 Score=58.72 Aligned_cols=60 Identities=13% Similarity=0.207 Sum_probs=52.9
Q ss_pred eeEEEEecCCCCCCceEEEe-CCeEEEEEEEeeecCCCeeeeEEEEEEeCCCCCCcCC-cEEEecCCCEEEEEEe
Q psy16273 140 KSKSHYPFRLWSAAEYSFKS-HTPVTVHAKHEEKSDSKSVYREYNREFLLPKGTNPES-IKSSLSKDGVLTVEAP 212 (227)
Q Consensus 140 ~y~I~ldvpGF~pedI~V~v-~n~L~V~Gk~e~~~d~~~~~R~F~R~f~LP~~VD~~~-I~AsLs~nGvLtI~lP 212 (227)
.|.+++.+|||++++|++.- |..|+|+. ..|+|.+.||....--. ..|.| +||.|+|..-
T Consensus 306 ~~~~~l~lP~~~~~~~~l~~~gdeL~v~~------------g~~rR~i~LP~~L~~~~v~~A~~-~~~~L~i~~~ 367 (374)
T 3igf_A 306 NRQVRLFLPGFDKKQVKLTQYGPEVTVEA------------GDQRRNIFLPPALSGRPITGAKF-QNNYLIISFL 367 (374)
T ss_dssp TTEEEEECTTCCGGGCEEEEETTEEEEEE------------TTEEEEEECCTTTTTCCEEEEEE-ETTEEEEEEC
T ss_pred cEEEEEECCCCCHHHeEEEEECCeEEEEE------------CCEeecccCCHHHcCCCccccEE-ECCEEEEEEe
Confidence 59999999999999999999 99999998 56999999998765443 57999 9999999874
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=95.02 E-value=0.035 Score=44.69 Aligned_cols=66 Identities=12% Similarity=0.061 Sum_probs=54.6
Q ss_pred ceeEEEEecCCCC--CCceEEEe-CCeEEEEEEEeeecCCCeeeeEEEEEEeCCCCC-CcCCcEEEec-CCCEEEEEEeC
Q psy16273 139 AKSKSHYPFRLWS--AAEYSFKS-HTPVTVHAKHEEKSDSKSVYREYNREFLLPKGT-NPESIKSSLS-KDGVLTVEAPL 213 (227)
Q Consensus 139 ~~y~I~ldvpGF~--pedI~V~v-~n~L~V~Gk~e~~~d~~~~~R~F~R~f~LP~~V-D~~~I~AsLs-~nGvLtI~lPk 213 (227)
+...|.+-+|..+ ..++++.+ ++.+.... .-|.-+++||..| |.++-+|+|. +.|.|+|++||
T Consensus 13 e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~------------~PYyLRL~LP~~V~e~~~~kA~YD~d~~~~~VtLpK 80 (134)
T 2k8q_A 13 EFIFLKIFISNIRFSAVGLEIIIQENMIIFHL------------SPYYLRLRFPHELIDDERSTAQYDSKDECINVKVAK 80 (134)
T ss_dssp SEEEEEEECCSSCCCSSSCCCEECSSSEEECS------------SSSCEEECCSSCEECCSSCEEEEETTTTEEEEEEEE
T ss_pred CEEEEEEEcCccccCccccEEEEeCCEEEEec------------CCeEEEecCCCeeecCCCcceeEeccCCEEEEEEeC
Confidence 5678888999988 89999998 77776655 2345669999999 9898999995 59999999999
Q ss_pred CCC
Q psy16273 214 PAL 216 (227)
Q Consensus 214 ~~~ 216 (227)
..+
T Consensus 81 ~~~ 83 (134)
T 2k8q_A 81 LNK 83 (134)
T ss_dssp SST
T ss_pred CCC
Confidence 875
No 17
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=94.24 E-value=0.3 Score=37.84 Aligned_cols=70 Identities=10% Similarity=-0.019 Sum_probs=57.6
Q ss_pred ceeEEEEecCCC---CCCceEEEe-CCeEEEEEEEeeecCCCeeeeEEEEEEe-CCCCCCcCCcEEEecCCCEEEEEEeC
Q psy16273 139 AKSKSHYPFRLW---SAAEYSFKS-HTPVTVHAKHEEKSDSKSVYREYNREFL-LPKGTNPESIKSSLSKDGVLTVEAPL 213 (227)
Q Consensus 139 ~~y~I~ldvpGF---~pedI~V~v-~n~L~V~Gk~e~~~d~~~~~R~F~R~f~-LP~~VD~~~I~AsLs~nGvLtI~lPk 213 (227)
+...|.+.++|. .++++.|++ .+.|.|..+... ...|.-.+. |-..||++.-...+ ..+.+.|.|.|
T Consensus 30 ~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~-------~~~y~~~~~~L~~~I~~e~S~~~v-~~~kVei~L~K 101 (127)
T 1x5m_A 30 KFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLN-------GKSYSMIVNNLLKPISVEGSSKKV-KTDTVLILCRK 101 (127)
T ss_dssp TEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCS-------SSCEEEEEECBSSCCCTTTCEEEE-ETTEEEEEEEC
T ss_pred CEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCC-------CCcEEEEhHHhcCccCcccCEEEE-eCCEEEEEEEE
Confidence 678999999998 899999999 999999884221 134666774 99999999878888 67999999999
Q ss_pred CCC
Q psy16273 214 PAL 216 (227)
Q Consensus 214 ~~~ 216 (227)
..+
T Consensus 102 ~~~ 104 (127)
T 1x5m_A 102 KVE 104 (127)
T ss_dssp SSS
T ss_pred CCC
Confidence 764
No 18
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=94.12 E-value=0.48 Score=37.18 Aligned_cols=67 Identities=12% Similarity=0.062 Sum_probs=53.3
Q ss_pred ceeEEEEecCCCC--CCceEEEe-CCeEEEEEEEeeecCCCeeeeEEEEEEeCCCCC-CcCCcEEEec-CCCEEEEEEeC
Q psy16273 139 AKSKSHYPFRLWS--AAEYSFKS-HTPVTVHAKHEEKSDSKSVYREYNREFLLPKGT-NPESIKSSLS-KDGVLTVEAPL 213 (227)
Q Consensus 139 ~~y~I~ldvpGF~--pedI~V~v-~n~L~V~Gk~e~~~d~~~~~R~F~R~f~LP~~V-D~~~I~AsLs-~nGvLtI~lPk 213 (227)
+...|.+-+|..+ ..++++.+ ++.+.... .-|--+..||..| |.+.-+|+|. ++|.++|.+||
T Consensus 27 efv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~------------~PYyLRL~lP~~vved~~~~A~YD~d~g~~~v~lpK 94 (115)
T 3eud_A 27 EFIFLKIFISNIRFSAVGLEIIIQENMIIFHL------------SPYYLRLRFPHELIDDERSTAQYDSKDECINVKVAK 94 (115)
T ss_dssp SEEEEEEECCSCCCCSSSCEEEEETTEEEEEE------------TTEEEEEECSSCEECSTTCEEEEETTTTEEEEEEEE
T ss_pred CEEEEEEEcCceecccCccEEEEeCCEEEEec------------CCeEEEEecCcceecCCCcceEEeCCCcEEEEEEcC
Confidence 5577888888754 88999999 88877766 2356679999997 7677789984 69999999999
Q ss_pred CCCC
Q psy16273 214 PALG 217 (227)
Q Consensus 214 ~~~e 217 (227)
..+.
T Consensus 95 ~~~G 98 (115)
T 3eud_A 95 LNKN 98 (115)
T ss_dssp SSTT
T ss_pred CcCC
Confidence 8763
No 19
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=93.14 E-value=0.81 Score=35.19 Aligned_cols=70 Identities=19% Similarity=0.078 Sum_probs=54.4
Q ss_pred ceeEEEEecC-CC-CCCceEEEe-CCeEEEEEEEeeecCCCeeeeEEEEEEeCCCCCCcCCcEEEecCCCE-EEEEEeCC
Q psy16273 139 AKSKSHYPFR-LW-SAAEYSFKS-HTPVTVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDGV-LTVEAPLP 214 (227)
Q Consensus 139 ~~y~I~ldvp-GF-~pedI~V~v-~n~L~V~Gk~e~~~d~~~~~R~F~R~f~LP~~VD~~~I~AsLs~nGv-LtI~lPk~ 214 (227)
+...|++.|| |. +++|+.|++ .+.|.|..+.. .+ ..+.-...|...|+++.-.-.+ .+|- |.|.|.|.
T Consensus 29 ~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~----~~---~~~~~~~~L~~~I~~e~S~w~i-~~~k~v~i~L~K~ 100 (124)
T 1wgv_A 29 TDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEE----NG---ERVLMEGKLTHKINTESSLWSL-EPGKCVLVNLSKV 100 (124)
T ss_dssp TEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECS----SS---EEEEEEEEBSSCBCTTTCEEEE-CTTSEEEEEECBS
T ss_pred cEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEcc----CC---CceEEcccccCcCCCcCCEEEE-eCCCEEEEEEEEC
Confidence 6688999998 77 899999999 99999987531 01 1122345799999999888888 6775 99999997
Q ss_pred CC
Q psy16273 215 AL 216 (227)
Q Consensus 215 ~~ 216 (227)
.+
T Consensus 101 ~~ 102 (124)
T 1wgv_A 101 GE 102 (124)
T ss_dssp SS
T ss_pred CC
Confidence 64
No 20
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=92.59 E-value=0.4 Score=37.05 Aligned_cols=69 Identities=9% Similarity=-0.053 Sum_probs=55.5
Q ss_pred ceeEEEEecCCCCCCceEEEe-CCeEEEEEEEeeecCCCeeeeEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCCCC
Q psy16273 139 AKSKSHYPFRLWSAAEYSFKS-HTPVTVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPAL 216 (227)
Q Consensus 139 ~~y~I~ldvpGF~pedI~V~v-~n~L~V~Gk~e~~~d~~~~~R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~~~ 216 (227)
+...|++.+++ .+++.|++ .+.|.+++.-..+ ...|.-.+.|-..|+++.-+.++ .++-+.|.|.|+.+
T Consensus 13 ~~V~ltI~~~~--~~~~~V~~~~~~l~~~~~~~~~------~~~y~~~l~L~~~I~~e~S~~~v-~~~kiei~L~K~~~ 82 (125)
T 1ejf_A 13 DYVFIEFCVED--SKDVNVNFEKSKLTFSCLGGSD------NFKHLNEIDLFHCIDPNDSKHKR-TDRSILCCLRKGES 82 (125)
T ss_dssp SEEEEEECCTT--EEEEEEEEETTEEEEEEEETTT------TEEEEEEEEBSSCEEEEEEEEEE-CSSCEEEEEEESST
T ss_pred CEEEEEEEecC--CCceEEEEECCEEEEEEEeCCC------CceEEEEEEccceeccccCEEEE-CCCEEEEEEEECCC
Confidence 56889999998 48999999 9999999853111 14577788999999999888888 67889999999764
No 21
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=92.20 E-value=0.37 Score=38.17 Aligned_cols=77 Identities=6% Similarity=-0.046 Sum_probs=58.6
Q ss_pred ceeEEEEecCCCCCCceEEEe-CCeEEEEEEEeeecC--CC---eeeeEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEe
Q psy16273 139 AKSKSHYPFRLWSAAEYSFKS-HTPVTVHAKHEEKSD--SK---SVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAP 212 (227)
Q Consensus 139 ~~y~I~ldvpGF~pedI~V~v-~n~L~V~Gk~e~~~d--~~---~~~R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lP 212 (227)
+...|++.+++..++++.|++ .+.|.|..+-....- -+ .....|.-.+.|-..|+++.-..++ ..+-+.|.|.
T Consensus 30 ~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~~L~~~I~pe~S~~~v-~~~kIeI~L~ 108 (134)
T 1wh0_A 30 DSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQVKLRNLIEPEQCTFCF-TASRIDICLR 108 (134)
T ss_dssp TEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEEEBSSCEEEEEEEEEE-CSSEEEEEEE
T ss_pred CEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEeccccccCCchhCEEEE-eCCEEEEEEE
Confidence 568899999999999999999 999999875322110 00 0012577778899999999877777 6799999999
Q ss_pred CCCC
Q psy16273 213 LPAL 216 (227)
Q Consensus 213 k~~~ 216 (227)
|+..
T Consensus 109 K~e~ 112 (134)
T 1wh0_A 109 KRQS 112 (134)
T ss_dssp ESSS
T ss_pred ECCC
Confidence 9764
No 22
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=91.85 E-value=0.49 Score=36.45 Aligned_cols=67 Identities=16% Similarity=0.089 Sum_probs=52.8
Q ss_pred ceeEEEEecCC---CCCCceEEEe-CCeEEEEEEEeeecCCCeeeeEEEEEEeCCCCCCcCCcEEEecCCC-EEEEEEeC
Q psy16273 139 AKSKSHYPFRL---WSAAEYSFKS-HTPVTVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDG-VLTVEAPL 213 (227)
Q Consensus 139 ~~y~I~ldvpG---F~pedI~V~v-~n~L~V~Gk~e~~~d~~~~~R~F~R~f~LP~~VD~~~I~AsLs~nG-vLtI~lPk 213 (227)
+...|++.||. .+++|+.|++ .+.|.|..+- ..+ .-.-.|...|+++.-.-++ ++| .|.|.|.|
T Consensus 26 ~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~kg-----~~~-----~~~g~L~~~I~~deS~w~i-~~~~~i~i~L~K 94 (121)
T 3qor_A 26 SELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKG-----QPA-----IIDGELYNEVKVEESSWLI-ADGAVVTVHLEK 94 (121)
T ss_dssp SEEEEEEECCCSSCCCGGGEEEEEETTEEEEEETT-----SCC-----SEEEEBSSCBCGGGCEEEE-ETTTEEEEEEEB
T ss_pred ceEEEEEECCCCCcccccceEEEEEcCEEEEEEcC-----cce-----EEeccccccccccccEEEE-cCCCEEEEEEEE
Confidence 56889999984 7999999999 9999987631 111 1244788999999888889 777 99999998
Q ss_pred CCC
Q psy16273 214 PAL 216 (227)
Q Consensus 214 ~~~ 216 (227)
...
T Consensus 95 ~~~ 97 (121)
T 3qor_A 95 INK 97 (121)
T ss_dssp SSS
T ss_pred CCC
Confidence 754
No 23
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=90.55 E-value=0.3 Score=38.41 Aligned_cols=74 Identities=11% Similarity=0.040 Sum_probs=54.3
Q ss_pred ceeEEEEecCCCCCCceEEEe-CCeEEEEEEEeeecCCCeeeeEEEEEEeCCCCCCcCCcEEEecCCCE-EEEEEeCCCC
Q psy16273 139 AKSKSHYPFRLWSAAEYSFKS-HTPVTVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDGV-LTVEAPLPAL 216 (227)
Q Consensus 139 ~~y~I~ldvpGF~pedI~V~v-~n~L~V~Gk~e~~~d~~~~~R~F~R~f~LP~~VD~~~I~AsLs~nGv-LtI~lPk~~~ 216 (227)
+...|++.+|+. +++.|.+ .+.|.+++......+ ....+.|.-.+.|...||++.-+..+ .++- +.|.|.|+.+
T Consensus 23 ~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~g-~~~~~~y~~~l~L~~~Idpe~S~~~v-~~~~~vei~L~K~~~ 98 (134)
T 2cg9_X 23 NYVLITVSIADC--DAPELTIKPSYIELKAQSKPHVG-DENVHHYQLHIDLYKEIIPEKTMHKV-ANGQHYFLKLYKKDL 98 (134)
T ss_dssp SEEEEECCCSSE--ESCCCCBCSSEEEECCEEC--------CEEBCEEEECSSCCCSSSEEEEE-CCC--CEEEEEECSS
T ss_pred CEEEEEEEecCC--CceEEEEECCEEEEEEecccccC-CccCceEEEEEEChhhccccccEEEE-CCCEEEEEEEEECCC
Confidence 557888888885 5999999 999999875421000 00124567778999999999989999 6777 9999999873
No 24
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=90.34 E-value=0.43 Score=37.03 Aligned_cols=67 Identities=21% Similarity=0.150 Sum_probs=52.7
Q ss_pred ceeEEEEecC-C--CCCCceEEEe-CCeEEEEEEEeeecCCCeeeeEEEEEEeCCCCCCcCCcEEEecCCC-EEEEEEeC
Q psy16273 139 AKSKSHYPFR-L--WSAAEYSFKS-HTPVTVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDG-VLTVEAPL 213 (227)
Q Consensus 139 ~~y~I~ldvp-G--F~pedI~V~v-~n~L~V~Gk~e~~~d~~~~~R~F~R~f~LP~~VD~~~I~AsLs~nG-vLtI~lPk 213 (227)
+...|++.|| | .+++++.|++ .+.|.|..+ +..+. -...|...|+++.-.-++ .+| .|.|.|.|
T Consensus 17 ~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k-----g~~~~-----~~~~L~~~I~~e~s~w~i-~~~k~v~i~L~K 85 (131)
T 1wfi_A 17 AELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK-----GQPPV-----VDGELYNEVKVEESSWLI-EDGKVVTVHLEK 85 (131)
T ss_dssp SEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET-----TSCCS-----BCSCBSSCBCSTTCEEEE-ETTTEEEEEEEB
T ss_pred CEEEEEEECCCCCcccccceEEEEeCCEEEEEEC-----CceEE-----EecccccccccccCEEEE-cCCCEEEEEEEE
Confidence 5688999999 6 7899999999 999999874 11111 133688899999888888 777 89999999
Q ss_pred CCC
Q psy16273 214 PAL 216 (227)
Q Consensus 214 ~~~ 216 (227)
..+
T Consensus 86 ~~~ 88 (131)
T 1wfi_A 86 INK 88 (131)
T ss_dssp SSS
T ss_pred CCC
Confidence 764
No 25
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=90.12 E-value=1.5 Score=35.36 Aligned_cols=66 Identities=11% Similarity=-0.050 Sum_probs=53.3
Q ss_pred ceeEEEEecC-CCCCCceEEEe-CCeEEEEEEEeeecCCCeeeeEEEEEEeCCCCCCcCCcEEEecCCC-EEEEEEeCCC
Q psy16273 139 AKSKSHYPFR-LWSAAEYSFKS-HTPVTVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDG-VLTVEAPLPA 215 (227)
Q Consensus 139 ~~y~I~ldvp-GF~pedI~V~v-~n~L~V~Gk~e~~~d~~~~~R~F~R~f~LP~~VD~~~I~AsLs~nG-vLtI~lPk~~ 215 (227)
+...|++.|| |.+++||.|++ .+.|.|..+- . .+ -...|...|+++.-.-++ .+| +|.|.|.|..
T Consensus 23 ~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~kg------~----~~-l~g~L~~~I~~eeS~w~i-~~~k~v~I~L~K~~ 90 (157)
T 2rh0_A 23 EEVFIEVQVPPGTRAQDIQCGLQSRHVALAVGG------R----EI-LKGKLFDSTIADEGTWTL-EDRKMVRIVLTKTK 90 (157)
T ss_dssp SEEEEEEECCTTCCGGGEEEEECSSEEEEEETT------E----EE-EEEEBSSCBCGGGCEEEE-ECCCEEEEEEEBSS
T ss_pred CEEEEEEECCCCCcccceEEEEecCEEEEEECC------E----EE-EeeccccccCccccEEEE-cCCcEEEEEEEEcC
Confidence 6688999997 89999999999 9999998741 1 11 345789999999888888 666 5999999986
Q ss_pred C
Q psy16273 216 L 216 (227)
Q Consensus 216 ~ 216 (227)
+
T Consensus 91 ~ 91 (157)
T 2rh0_A 91 R 91 (157)
T ss_dssp C
T ss_pred C
Confidence 4
No 26
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=89.83 E-value=0.94 Score=35.19 Aligned_cols=65 Identities=11% Similarity=0.073 Sum_probs=50.4
Q ss_pred ceeEEEEecC-CCCCCceEEEe-CCeEEEEEEEeeecCCCeeeeEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCCC
Q psy16273 139 AKSKSHYPFR-LWSAAEYSFKS-HTPVTVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPA 215 (227)
Q Consensus 139 ~~y~I~ldvp-GF~pedI~V~v-~n~L~V~Gk~e~~~d~~~~~R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~~ 215 (227)
+...|++.|| |.+++++.|++ .+.|.|..+-. . .-...|...|+++.-.-.+ .+|-|.|.|.|..
T Consensus 14 ~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~g~----------~-~~~~~L~~~I~~e~S~w~i-~~~kv~i~L~K~~ 80 (131)
T 2o30_A 14 NEINIQFPVTGDADSSAIKIRMVGKKICVKNQGE----------I-VIDGELLHEVDVSSLWWVI-NGDVVDVNVTKKR 80 (131)
T ss_dssp TEEEEEEECC---CCSCEEEEEETTEEEEEETTE----------E-EEEEEBSSCEEEEEEEEEE-ETTEEEEEEEESS
T ss_pred CEEEEEEECCCCCCccceEEEEECCEEEEEECCE----------e-eEccccccccccccCEEEE-eCCEEEEEEEECC
Confidence 5688999995 88999999999 99999987310 1 2345788999999877788 6788999999874
No 27
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=69.82 E-value=7.4 Score=31.05 Aligned_cols=67 Identities=9% Similarity=-0.048 Sum_probs=51.3
Q ss_pred ceeEEEEecCCCCCCceEEEe-C-CeEEEEEEEeeecCCCeeeeEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCCCC
Q psy16273 139 AKSKSHYPFRLWSAAEYSFKS-H-TPVTVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPAL 216 (227)
Q Consensus 139 ~~y~I~ldvpGF~pedI~V~v-~-n~L~V~Gk~e~~~d~~~~~R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~~~ 216 (227)
+...|+|.+++. ++++|++ . +.|.+++. . . .+ ..|.-.+.|=..|+++ -+.+. ...-+.|.|.|+.+
T Consensus 14 ~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~-~--~-~~---~~y~~~l~L~~~Idpe-S~~~v-~~~kIei~L~K~e~ 82 (150)
T 2kmw_A 14 DKVYLTVALPDA--KDISVKCEPQGLFSFSAL-G--A-QG---ERFEFSLELYGKIMTE-YRKNV-GLRNIIFSIQKEER 82 (150)
T ss_dssp SEEEEEECCSSE--EEEEECCCTTEEEEEEEE-T--T-TT---EEEEEEEEBSSCEEEE-EEEEE-ESSSEEEEEEECCS
T ss_pred CEEEEEEEeCCC--CceEEEEecCCEEEEEEE-c--C-CC---ceEEEEeEhhhccccc-ceEEe-cCCEEEEEEEECCC
Confidence 568899999995 5788888 3 68999986 1 1 11 4577788899999999 77777 56778999999764
No 28
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=67.66 E-value=7.6 Score=27.65 Aligned_cols=35 Identities=17% Similarity=0.287 Sum_probs=29.2
Q ss_pred eEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCCCC
Q psy16273 180 REYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPAL 216 (227)
Q Consensus 180 R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~~~ 216 (227)
..|.=.+.|| +++++.|.-++ .+|.|+|.+-+...
T Consensus 7 ~~~~v~~dlP-G~~~edi~V~v-~~~~L~I~g~~~~~ 41 (85)
T 3q9p_A 7 DRWRVSLDVN-HFAPDELTVKT-KDGVVEITGKHAAR 41 (85)
T ss_dssp CEEEEEEECT-TTCCSEEEEEE-ETTEEEEEEEEC--
T ss_pred CEEEEEEECC-CCChHHEEEEE-ECCEEEEEEEEccc
Confidence 3588889996 79999999999 89999999987653
No 29
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=61.41 E-value=12 Score=26.94 Aligned_cols=35 Identities=20% Similarity=0.407 Sum_probs=29.8
Q ss_pred eEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCCCC
Q psy16273 180 REYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPAL 216 (227)
Q Consensus 180 R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~~~ 216 (227)
..|.=.+.|| +++.+.|.-++ .+|.|+|.+-+...
T Consensus 14 ~~~~v~~~lP-G~~~edi~v~~-~~~~L~I~g~~~~~ 48 (100)
T 3gla_A 14 NHFVLYADLP-GIDPSQIEVQM-DKGILSIRGERKSE 48 (100)
T ss_dssp SEEEEEEECT-TSCGGGCEEEE-ETTEEEEEEEECCG
T ss_pred CEEEEEEECC-CCCHHHEEEEE-ECCEEEEEEEEcCc
Confidence 3577889997 79999999999 89999999987653
No 30
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=61.38 E-value=12 Score=27.39 Aligned_cols=34 Identities=21% Similarity=0.344 Sum_probs=29.5
Q ss_pred eEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCCC
Q psy16273 180 REYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPA 215 (227)
Q Consensus 180 R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~~ 215 (227)
..|.=++.|| +++.+.|.-++ .+|.|+|.+-+..
T Consensus 16 ~~~~v~~~lP-G~~~edi~v~~-~~~~L~I~g~~~~ 49 (102)
T 4fei_A 16 THLDLLLDVP-GVDAGTLALAE-DGGQLTVSGERPG 49 (102)
T ss_dssp TEEEEEEECT-TCCGGGCEEEE-ETTEEEEEEEECC
T ss_pred CEEEEEEECC-CCchHhEEEEE-ECCEEEEEEEEec
Confidence 3588889998 89999999999 8999999988754
No 31
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=59.83 E-value=10 Score=27.12 Aligned_cols=33 Identities=15% Similarity=0.260 Sum_probs=28.7
Q ss_pred EEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCCC
Q psy16273 181 EYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPA 215 (227)
Q Consensus 181 ~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~~ 215 (227)
.|.=.+.|| +++.+.|.-.+ .+|.|+|.+-+..
T Consensus 7 ~~~v~~dlP-G~~~edi~V~v-~~~~L~I~g~~~~ 39 (90)
T 2y1y_A 7 RFSVNLDVK-HFSPEELKVKV-LGDVIEVHGKHEE 39 (90)
T ss_dssp CEEEEEECT-TSCGGGEEEEE-ETTEEEEEEEEEE
T ss_pred EEEEEEECC-CCcHHHeEEEE-ECCEEEEEEEEec
Confidence 577789998 89999999999 7999999998653
No 32
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=57.96 E-value=11 Score=27.62 Aligned_cols=34 Identities=15% Similarity=0.115 Sum_probs=29.6
Q ss_pred eEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCCC
Q psy16273 180 REYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPA 215 (227)
Q Consensus 180 R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~~ 215 (227)
..|.=.+.|| +++.+.|.-++ .+|.|+|.+-+..
T Consensus 11 ~~~~v~~dlP-G~~~edI~V~v-~~~~L~I~g~~~~ 44 (101)
T 2wj5_A 11 GYFSVLLDVK-HFSPEEISVKV-VGDHVEVHARHEE 44 (101)
T ss_dssp SCEEEEEECT-TSCGGGEEEEE-ETTEEEEEEEEEE
T ss_pred CEEEEEEECC-CCcHHHeEEEE-ECCEEEEEEEEec
Confidence 3577889998 89999999999 7999999998754
No 33
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=52.32 E-value=23 Score=26.59 Aligned_cols=34 Identities=26% Similarity=0.162 Sum_probs=28.8
Q ss_pred EEEEEEeCCCCCCcCCcEEEecCC-CEEEEEEeCCCC
Q psy16273 181 EYNREFLLPKGTNPESIKSSLSKD-GVLTVEAPLPAL 216 (227)
Q Consensus 181 ~F~R~f~LP~~VD~~~I~AsLs~n-GvLtI~lPk~~~ 216 (227)
+|.=.+.|| +++.+.|.-++ .+ |.|+|.+-+...
T Consensus 35 ~~~v~~~lP-G~~~edi~V~v-~~~~~L~I~g~~~~~ 69 (123)
T 3aab_A 35 YLVVVADLA-GFNKEKIKARV-SGQNELIIEAEREIT 69 (123)
T ss_dssp EEEEEEECC-SCCGGGCEEEE-ETTTEEEEEEECCCC
T ss_pred EEEEEEECC-CCCHHHEEEEE-eCCCEEEEEEEEecc
Confidence 467778897 79999999999 67 999999998664
No 34
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=51.77 E-value=18 Score=26.70 Aligned_cols=33 Identities=6% Similarity=0.166 Sum_probs=28.9
Q ss_pred eEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCC
Q psy16273 180 REYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLP 214 (227)
Q Consensus 180 R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~ 214 (227)
..|.=.+.|| +++.+.|.-++ .+|.|+|.+.+.
T Consensus 12 ~~~~v~~dlP-G~~~edi~V~v-~~~~L~I~g~~~ 44 (106)
T 3l1e_A 12 DKFVIFLDVK-HFSPEDLTVKV-QEDFVEIHGKHN 44 (106)
T ss_dssp SEEEEEEECT-TSCGGGEEEEE-ETTEEEEEEEEE
T ss_pred CEEEEEEECC-CCChHHEEEEE-ECCEEEEEEEEc
Confidence 4588889997 89999999999 899999999764
No 35
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=49.33 E-value=8.8 Score=27.40 Aligned_cols=24 Identities=4% Similarity=0.224 Sum_probs=21.9
Q ss_pred ecCCCCCCceEEEe-CCeEEEEEEE
Q psy16273 146 PFRLWSAAEYSFKS-HTPVTVHAKH 169 (227)
Q Consensus 146 dvpGF~pedI~V~v-~n~L~V~Gk~ 169 (227)
+|-.|++++|.+.+ .+.|.|+|+.
T Consensus 14 ~V~sFd~e~i~L~T~~G~L~IkG~~ 38 (71)
T 2ks0_A 14 KVQSFDPKEILLETIQGVLSIKGEK 38 (71)
T ss_dssp EEEEECSSEEEEEETTEEEEEEEEC
T ss_pred CEEEECCCEEEEEeCceEEEEEcCC
Confidence 57789999999999 9999999974
No 36
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=42.84 E-value=34 Score=26.89 Aligned_cols=32 Identities=25% Similarity=0.248 Sum_probs=26.4
Q ss_pred EEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCCC
Q psy16273 182 YNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPA 215 (227)
Q Consensus 182 F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~~ 215 (227)
|.=++.|| +++.+.|.-++ .+|.|+|++.+..
T Consensus 68 ~~v~~dlP-G~~~edi~V~~-~~~~L~I~g~~~~ 99 (161)
T 4eld_A 68 IKVIAWLP-GVNKEDIILNA-VGDTLEIRAKRSP 99 (161)
T ss_dssp EEEEEECT-TCCGGGEEEEE-ETTEEEEEEECCC
T ss_pred EEEEEECC-CCChHhEEEEE-ECCEEEEEEEEcc
Confidence 44456775 78999999999 8999999998876
No 37
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=40.48 E-value=45 Score=26.08 Aligned_cols=35 Identities=23% Similarity=0.227 Sum_probs=27.4
Q ss_pred EEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCCCC
Q psy16273 181 EYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPAL 216 (227)
Q Consensus 181 ~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~~~ 216 (227)
+|.=++.|| +++.+.|.-.+.+++.|+|.+-+...
T Consensus 54 ~~~v~~dlP-Gv~kedI~V~v~~~~~L~I~g~~~~~ 88 (151)
T 1gme_A 54 AHVFKADLP-GVKKEEVKVEVEDGNVLVVSGERTKE 88 (151)
T ss_dssp EEEEEEECT-TCCGGGEEEEEETTTEEEEEECCCCC
T ss_pred EEEEEEECC-CCChHHEEEEEecCCEEEEEEEEccc
Confidence 355567887 78999999999446799999987754
No 38
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=38.91 E-value=29 Score=28.20 Aligned_cols=34 Identities=15% Similarity=0.250 Sum_probs=29.1
Q ss_pred eEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCCC
Q psy16273 180 REYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLPA 215 (227)
Q Consensus 180 R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~~ 215 (227)
..|.=.+.|| +++++.|+-++ .+|.|+|++.+..
T Consensus 73 d~~~v~~dlP-G~~~edI~V~v-~~~~L~I~g~~~~ 106 (175)
T 2klr_A 73 DRFSVNLDVK-HFSPEELKVKV-LGDVIEVHGKHEE 106 (175)
T ss_dssp SEEEEEECCS-SCCGGGEEEEE-ETTEEEEEEEEEE
T ss_pred CeEEEEEECC-CCChHHEEEEE-ECCEEEEEEEEcc
Confidence 4577788997 89999999999 7999999997754
No 39
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=38.53 E-value=28 Score=28.62 Aligned_cols=45 Identities=24% Similarity=0.319 Sum_probs=31.6
Q ss_pred CCceEEEe-CCeEEEEEEEeeecCCCeeeeEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCC
Q psy16273 152 AAEYSFKS-HTPVTVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLP 214 (227)
Q Consensus 152 pedI~V~v-~n~L~V~Gk~e~~~d~~~~~R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~ 214 (227)
|+.++|++ ++.++|+|.+.+ .+|.| +..|+. .+ +||.|+|+.+..
T Consensus 11 P~gV~V~i~~~~VtVkGpkG~----------L~~~~--~~~v~i-----~~-~~~~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVNGNTVTVKGPKGE----------LTRTF--HPDMTI-----TV-EGNVITVTRPSD 56 (177)
T ss_dssp CTTCEEEEETTEEEEEETTEE----------EEEEC--CTTCEE-----EE-ETTEEEEECSCC
T ss_pred CCCCEEEEeCCEEEEECCCeE----------EEEEc--CCCEEE-----EE-eCCEEEEEcCCC
Confidence 48999999 999999996432 33433 555443 45 789998886643
No 40
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=36.47 E-value=33 Score=29.23 Aligned_cols=45 Identities=13% Similarity=0.143 Sum_probs=31.2
Q ss_pred CCceEEEe-CCeEEEEEEEeeecCCCeeeeEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCC
Q psy16273 152 AAEYSFKS-HTPVTVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLP 214 (227)
Q Consensus 152 pedI~V~v-~n~L~V~Gk~e~~~d~~~~~R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~ 214 (227)
|+.++|++ ++.++|+|.+.+ .++.| +..|+ ... +||.|+|+.+..
T Consensus 39 P~gV~V~i~~~~VtVKGPkG~----------L~~~~--~~~v~-----i~~-e~~~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQDGVFKVKGPKGE----------LTVPY--NTELT-----VRQ-DGDQLLVERPSD 84 (212)
T ss_pred CCCcEEEEeCCEEEEECCCEE----------EEEEC--CCCeE-----EEE-ECCEEEEEcCCC
Confidence 48999999 999999996543 33333 44444 345 789988886643
No 41
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=35.36 E-value=30 Score=26.69 Aligned_cols=36 Identities=25% Similarity=0.335 Sum_probs=23.8
Q ss_pred CCCCcCCcEEEecCCCEEEEEEeCCCCCCCCeeeccC
Q psy16273 190 KGTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPIA 226 (227)
Q Consensus 190 ~~VD~~~I~AsLs~nGvLtI~lPk~~~e~~~R~I~I~ 226 (227)
.+...-.|+..++.||+|.|++--..- .+...|.|+
T Consensus 95 ~G~~~IeVtf~iD~nGiL~V~a~d~~t-g~~~~i~i~ 130 (135)
T 1q5l_A 95 RGMPQIEVTFDIDADGILHVSAKDKNS-GKEQKITIK 130 (135)
T ss_dssp SSSCCEEEEEEECTTSEEEEEEEETTT-CCEEEEEEE
T ss_pred CceeEEEEEEEECCCCEEEEEEEECCC-CCEEEEEEe
Confidence 444434577888999999999964432 345566553
No 42
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=34.88 E-value=37 Score=27.94 Aligned_cols=43 Identities=21% Similarity=0.278 Sum_probs=29.9
Q ss_pred CCceEEEe-CCeEEEEEEEeeecCCCeeeeEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEe
Q psy16273 152 AAEYSFKS-HTPVTVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAP 212 (227)
Q Consensus 152 pedI~V~v-~n~L~V~Gk~e~~~d~~~~~R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lP 212 (227)
|+.++|++ ++.++|+|.+.+ -+|. |+..|+. .+ +++.|+|+.+
T Consensus 12 P~gV~v~i~~~~v~VkGpkG~----------L~~~--~~~~v~i-----~~-~~~~l~v~~~ 55 (180)
T 3v2d_H 12 PKGVSVEVAPGRVKVKGPKGE----------LEVP--VSPEMRV-----VV-EEGVVRVERP 55 (180)
T ss_dssp CTTCEEEEETTEEEEECSSCE----------EEEE--CCTTSEE-----EE-ETTEEEEECS
T ss_pred CCCcEEEEeCCEEEEEeCCcE----------EEEE--eCCCEEE-----EE-ECCEEEEEEC
Confidence 59999999 999999995432 2333 3444444 45 6889988754
No 43
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=33.20 E-value=23 Score=26.48 Aligned_cols=19 Identities=11% Similarity=0.083 Sum_probs=16.6
Q ss_pred CCceEEEe-CCeEEEEEEEe
Q psy16273 152 AAEYSFKS-HTPVTVHAKHE 170 (227)
Q Consensus 152 pedI~V~v-~n~L~V~Gk~e 170 (227)
|+.++|++ ++.++|+|.+.
T Consensus 20 P~gV~V~i~~~~VtVKGPkG 39 (100)
T 2cql_A 20 PENVDITLKGRTVIVKGPRG 39 (100)
T ss_dssp CSSCEEEEETTEEEEEETTE
T ss_pred CCCCEEEEeCCEEEEECCCc
Confidence 48999999 99999999654
No 44
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=29.08 E-value=45 Score=26.24 Aligned_cols=36 Identities=25% Similarity=0.398 Sum_probs=24.3
Q ss_pred CCCCCcCCcEEEecCCCEEEEEEeCCCCCCCCeeecc
Q psy16273 189 PKGTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPI 225 (227)
Q Consensus 189 P~~VD~~~I~AsLs~nGvLtI~lPk~~~e~~~R~I~I 225 (227)
|.++-.-.|+-.++.||+|+|++--... .+...|.|
T Consensus 77 p~G~~~I~Vtf~iD~nGiL~V~a~d~~t-g~~~~i~I 112 (152)
T 3h0x_A 77 PRGVPQIEVTFALDANGILKVSATDKGT-GKSESITI 112 (152)
T ss_dssp CTTCSCEEEEEEECTTSEEEEEEEETTT-CCEEEEEE
T ss_pred CCCCceEEEEEEEcCCCEEEEEEEEcCC-CcEeEEEE
Confidence 4454334578888999999999975442 34556665
No 45
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=28.35 E-value=48 Score=26.11 Aligned_cols=36 Identities=22% Similarity=0.382 Sum_probs=24.4
Q ss_pred CCCCCcCCcEEEecCCCEEEEEEeCCCCCCCCeeecc
Q psy16273 189 PKGTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPI 225 (227)
Q Consensus 189 P~~VD~~~I~AsLs~nGvLtI~lPk~~~e~~~R~I~I 225 (227)
|.++-.-.|+-.++.||+|+|++--..- .+...|.|
T Consensus 77 p~G~~~IeVtf~iD~nGiL~Vsa~d~~t-g~~~~i~I 112 (151)
T 3dqg_A 77 PRGVPQVEVTFDIDANGIVNVSARDRGT-GKEQQIVI 112 (151)
T ss_dssp CTTCSCEEEEEEECTTSEEEEEEEETTT-CCEEEEEE
T ss_pred CCCCcEEEEEEEeccCcEEEEEEEEccC-CCEeEEEE
Confidence 4455334578888999999999975442 34556665
No 46
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=28.27 E-value=46 Score=26.24 Aligned_cols=37 Identities=22% Similarity=0.372 Sum_probs=25.1
Q ss_pred CCCCCcCCcEEEecCCCEEEEEEeCCCCCCCCeeeccC
Q psy16273 189 PKGTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPIA 226 (227)
Q Consensus 189 P~~VD~~~I~AsLs~nGvLtI~lPk~~~e~~~R~I~I~ 226 (227)
|.++-.-.|+-.++.||+|+|++--+.- .+...|.|.
T Consensus 77 p~G~~~IeVtf~iD~nGiL~Vsa~d~~t-g~~~~i~I~ 113 (152)
T 3dob_A 77 PRGVPQIEVTFNIDANGILNVSAEDKST-GKSNRITIQ 113 (152)
T ss_dssp CTTCCCEEEEEEECTTCCEEEEEEETTT-CCEEEEEEC
T ss_pred CCCCceEEEEEEeCCCCeEEEEEEEcCC-CCEEEEEEE
Confidence 4555434578888999999999975442 345666663
No 47
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=28.18 E-value=26 Score=30.05 Aligned_cols=46 Identities=13% Similarity=0.184 Sum_probs=31.9
Q ss_pred CCceEEEe-CCeEEEEEEEeeecCCCeeeeEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCC
Q psy16273 152 AAEYSFKS-HTPVTVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLP 214 (227)
Q Consensus 152 pedI~V~v-~n~L~V~Gk~e~~~d~~~~~R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~ 214 (227)
|+.++|++ ++.++|+|.+.+ .+| .|++.|+.. .. +||.|+|+.+..
T Consensus 54 P~gV~V~i~~~~VtVKGPkG~----------L~~--~~~~~v~i~----~~-e~~~i~v~~~~~ 100 (223)
T 3bbo_I 54 PSNVTIALEGQDLKVKGPLGE----------LAL--TYPREVELT----KE-ESGFLRVKKTVE 100 (223)
T ss_dssp STTSCEEESSSEEEECCSSCC----------EEE--ECCSSCEEE----EC-SSSCEEEECSSC
T ss_pred CCCCEEEEeCCEEEEECCCeE----------EEE--EcCCCEEEE----Ee-cCCEEEEEcCCC
Confidence 48999999 999999996432 233 335555441 45 789999887654
No 48
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=27.79 E-value=48 Score=25.67 Aligned_cols=37 Identities=19% Similarity=0.346 Sum_probs=23.9
Q ss_pred CCCCCcCCcEEEecCCCEEEEEEeCCCCCCCCeeeccC
Q psy16273 189 PKGTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPIA 226 (227)
Q Consensus 189 P~~VD~~~I~AsLs~nGvLtI~lPk~~~e~~~R~I~I~ 226 (227)
|.+...-.|+-.++.||+|+|++--... .+...|.|.
T Consensus 77 p~G~~~I~V~f~id~nGiL~V~a~d~~t-g~~~~i~i~ 113 (152)
T 2op6_A 77 PRGVPQIEVTFEIDVNGILHVSAEDKGT-GNKNKLTIT 113 (152)
T ss_dssp CTTCSCEEEEEEECTTSCEEEEEEETTT-CCEEEEEEC
T ss_pred CCCCceEEEEEEECCCcEEEEEEEEecC-CcEEEEEee
Confidence 3455434577888999999999963332 344566653
No 49
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=27.20 E-value=59 Score=26.77 Aligned_cols=46 Identities=13% Similarity=0.215 Sum_probs=31.3
Q ss_pred CCceEEEe-CCeEEEEEEEeeecCCCeeeeEEEEEEeCCCCCCcCCcEEEecCCCEEEEEEeCC
Q psy16273 152 AAEYSFKS-HTPVTVHAKHEEKSDSKSVYREYNREFLLPKGTNPESIKSSLSKDGVLTVEAPLP 214 (227)
Q Consensus 152 pedI~V~v-~n~L~V~Gk~e~~~d~~~~~R~F~R~f~LP~~VD~~~I~AsLs~nGvLtI~lPk~ 214 (227)
|+.++|++ ++.++|+|.+.+ .+|.|. +..|+ ..+ ++|.|+|+.+..
T Consensus 9 P~gV~v~i~~~~vtVkGpkG~----------L~~~~~-~~~v~-----i~~-~~~~i~v~~~~~ 55 (178)
T 1vq8_E 9 PEDVDAEQDHLDITVEGDNGS----------VTRRLW-YPDID-----VSV-DGDTVVIESDED 55 (178)
T ss_dssp CTTCEEEEETTEEEEEETTEE----------EEEECC-CTTCE-----EEE-ETTEEEEECSCC
T ss_pred CCCCEEEEeCCEEEEECCCeE----------EEEEEE-CCeEE-----EEE-ECCEEEEEcCCC
Confidence 48999999 999999996433 333331 44444 345 789988886643
No 50
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=26.22 E-value=51 Score=26.91 Aligned_cols=37 Identities=22% Similarity=0.358 Sum_probs=25.1
Q ss_pred CCCCCcCCcEEEecCCCEEEEEEeCCCCCCCCeeeccC
Q psy16273 189 PKGTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPIA 226 (227)
Q Consensus 189 P~~VD~~~I~AsLs~nGvLtI~lPk~~~e~~~R~I~I~ 226 (227)
|.++-.-.|+-.++.||+|+|++--+.. .+...|.|.
T Consensus 97 p~G~~~IeVtf~iD~nGiL~VsA~d~~t-g~~~~i~I~ 133 (182)
T 3n8e_A 97 PRGVPQIEVTFDIDANGIVHVSAKDKGT-GREQQIVIQ 133 (182)
T ss_dssp CTTCSCEEEEEEECTTCCEEEEEEETTT-CCEEEEEES
T ss_pred CCCCeeEEEEEEEecCCEEEEEEEEcCC-CCEeeEEEe
Confidence 4455334578888999999999975442 355666664
No 51
>3e5a_B Targeting protein for XKLP2; aurora A, serine/threonine-protein kinase, cofactor, TPX2, V inhibitor, phosphorylation, ATP-binding, cell cycle; HET: TPO VX6; 2.30A {Homo sapiens} PDB: 3ha6_B* 1ol5_B*
Probab=22.32 E-value=19 Score=23.36 Aligned_cols=11 Identities=64% Similarity=0.643 Sum_probs=4.6
Q ss_pred CCCcccceeee
Q psy16273 1 MSQSQSSYSLV 11 (227)
Q Consensus 1 ~~~~~~~~~~~ 11 (227)
|||.|.+||.-
T Consensus 2 Msqv~~sYSfD 12 (44)
T 3e5a_B 2 MSQVKSSYSYD 12 (44)
T ss_dssp -----CCCCCS
T ss_pred ccccccceecc
Confidence 88888999864
No 52
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=22.22 E-value=64 Score=26.93 Aligned_cols=37 Identities=27% Similarity=0.394 Sum_probs=25.3
Q ss_pred CCCCCcCCcEEEecCCCEEEEEEeCCCCCCCCeeeccC
Q psy16273 189 PKGTNPESIKSSLSKDGVLTVEAPLPALGAPEKLIPIA 226 (227)
Q Consensus 189 P~~VD~~~I~AsLs~nGvLtI~lPk~~~e~~~R~I~I~ 226 (227)
|.++-.-.|+-.++.||+|+|++--... .+...|.|.
T Consensus 78 p~G~~~IeVtf~iD~nGiL~V~a~d~~t-g~~~~i~I~ 114 (219)
T 4e81_A 78 PRGMPQIEVTFDIDADGILHVSAKDKNS-GKEQKITIK 114 (219)
T ss_dssp STTCSCEEEEEEECTTCCEEEEEEETTT-CCEEEEEEC
T ss_pred CCCCceEEEEEEeCCCCCEeeeeecccc-CccceEeee
Confidence 4455434578888999999999975442 345666663
Done!