Query psy1628
Match_columns 114
No_of_seqs 131 out of 1275
Neff 5.7
Searched_HMMs 29240
Date Fri Aug 16 17:21:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1628.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1628hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e3q_A Pyruvate transaminase; 100.0 2.3E-30 7.7E-35 214.5 9.2 84 23-114 223-306 (473)
2 4atq_A 4-aminobutyrate transam 100.0 2E-29 6.7E-34 207.8 10.7 72 40-114 225-296 (456)
3 4ao9_A Beta-phenylalanine amin 99.9 3.2E-25 1.1E-29 183.3 9.3 81 23-114 208-288 (454)
4 4a0g_A Adenosylmethionine-8-am 99.9 5.3E-24 1.8E-28 186.3 8.8 90 19-114 573-665 (831)
5 3hmu_A Aminotransferase, class 99.9 1.1E-22 3.9E-27 165.8 9.2 85 22-114 209-293 (472)
6 3i5t_A Aminotransferase; pyrid 99.9 1E-21 3.5E-26 160.0 10.0 85 22-114 207-292 (476)
7 3tfu_A Adenosylmethionine-8-am 99.8 2.6E-21 8.8E-26 157.0 8.7 84 22-114 220-304 (457)
8 3gju_A Putative aminotransfera 99.8 2.6E-20 8.8E-25 149.8 9.8 85 22-114 207-291 (460)
9 4a6r_A Omega transaminase; tra 99.8 2.7E-20 9.1E-25 149.7 9.8 85 22-114 205-289 (459)
10 3dod_A Adenosylmethionine-8-am 99.8 2.7E-20 9.2E-25 149.0 9.0 83 23-114 198-281 (448)
11 3oks_A 4-aminobutyrate transam 99.8 8.5E-20 2.9E-24 146.9 9.8 72 40-114 226-297 (451)
12 3n5m_A Adenosylmethionine-8-am 99.8 1.7E-19 5.8E-24 143.9 10.3 84 22-114 201-285 (452)
13 4ffc_A 4-aminobutyrate aminotr 99.8 1.2E-19 4.1E-24 146.4 9.3 72 40-114 224-295 (453)
14 1ohv_A 4-aminobutyrate aminotr 99.8 2E-19 6.7E-24 146.4 9.5 87 22-114 242-330 (472)
15 2cjg_A L-lysine-epsilon aminot 99.8 1.1E-18 3.9E-23 140.3 9.7 84 22-114 218-301 (449)
16 3l44_A Glutamate-1-semialdehyd 99.8 1.4E-18 4.8E-23 137.4 9.0 82 23-114 190-271 (434)
17 4e77_A Glutamate-1-semialdehyd 99.8 2.3E-18 7.7E-23 136.3 10.0 82 23-114 188-269 (429)
18 1z7d_A Ornithine aminotransfer 99.8 2.5E-18 8.6E-23 137.7 9.6 72 40-114 211-282 (433)
19 2oat_A Ornithine aminotransfer 99.7 3E-18 1E-22 137.7 9.1 72 40-114 222-293 (439)
20 3k28_A Glutamate-1-semialdehyd 99.7 4E-18 1.4E-22 135.2 9.4 82 23-114 188-269 (429)
21 3i4j_A Aminotransferase, class 99.7 3.7E-18 1.3E-22 134.9 8.0 84 23-114 177-262 (430)
22 2epj_A Glutamate-1-semialdehyd 99.7 9.7E-18 3.3E-22 132.9 9.8 82 23-114 191-272 (434)
23 3fq8_A Glutamate-1-semialdehyd 99.7 1.6E-17 5.3E-22 131.2 10.0 82 23-114 187-268 (427)
24 3a8u_X Omega-amino acid--pyruv 99.7 3.1E-17 1.1E-21 130.5 10.1 85 22-114 205-289 (449)
25 3dxv_A Alpha-amino-epsilon-cap 99.7 3.8E-17 1.3E-21 129.4 9.7 85 22-114 187-271 (439)
26 1zod_A DGD, 2,2-dialkylglycine 99.7 4.7E-17 1.6E-21 128.4 8.8 84 23-114 190-273 (433)
27 2cy8_A D-phgat, D-phenylglycin 99.7 4.3E-17 1.5E-21 130.1 7.0 82 23-114 189-270 (453)
28 2e7u_A Glutamate-1-semialdehyd 99.7 8.9E-17 3E-21 127.0 8.7 81 23-114 187-267 (424)
29 3nx3_A Acoat, acetylornithine 99.7 1.2E-16 4E-21 124.5 8.8 72 40-114 178-249 (395)
30 2pb2_A Acetylornithine/succiny 99.7 1.8E-16 6.1E-21 126.1 8.3 72 40-114 200-271 (420)
31 1s0a_A Adenosylmethionine-8-am 99.7 4.6E-16 1.6E-20 122.8 9.9 83 23-114 192-275 (429)
32 2eo5_A 419AA long hypothetical 99.6 5.2E-16 1.8E-20 122.9 9.5 85 23-114 197-282 (419)
33 2yky_A Beta-transaminase; tran 99.5 1.2E-17 4.1E-22 137.8 0.0 99 5-114 187-301 (465)
34 1sff_A 4-aminobutyrate aminotr 99.6 1.4E-14 4.7E-19 113.3 10.5 85 23-114 185-269 (426)
35 3ruy_A Ornithine aminotransfer 99.5 2.9E-14 9.9E-19 110.6 8.7 72 40-114 181-252 (392)
36 4adb_A Succinylornithine trans 99.5 3.6E-14 1.2E-18 110.1 8.3 72 40-114 182-253 (406)
37 2ord_A Acoat, acetylornithine 99.4 9.8E-13 3.4E-17 102.3 8.4 72 40-114 182-253 (397)
38 1vef_A Acetylornithine/acetyl- 99.4 1.2E-12 4.1E-17 101.6 8.4 72 40-114 184-255 (395)
39 2eh6_A Acoat, acetylornithine 99.3 4.1E-12 1.4E-16 97.5 8.9 72 40-114 171-242 (375)
40 3l8a_A METC, putative aminotra 99.2 6.7E-11 2.3E-15 93.2 8.0 81 23-114 184-269 (421)
41 3kki_A CAI-1 autoinducer synth 99.0 1.2E-09 4.2E-14 85.2 7.8 76 23-114 176-257 (409)
42 2w8t_A SPT, serine palmitoyltr 98.9 2.6E-09 8.7E-14 84.6 8.5 79 23-114 181-265 (427)
43 3tqx_A 2-amino-3-ketobutyrate 98.8 1.8E-08 6.2E-13 77.3 7.2 80 24-114 161-246 (399)
44 3op7_A Aminotransferase class 98.7 4E-08 1.4E-12 75.3 6.8 71 40-114 153-223 (375)
45 1bs0_A Protein (8-amino-7-oxon 98.7 1.1E-07 3.8E-12 73.1 9.0 78 23-114 156-237 (384)
46 3dzz_A Putative pyridoxal 5'-p 98.7 6E-08 2E-12 74.2 7.4 72 40-113 159-234 (391)
47 3piu_A 1-aminocyclopropane-1-c 98.6 6.6E-08 2.3E-12 76.1 7.6 52 40-92 190-241 (435)
48 2bwn_A 5-aminolevulinate synth 98.6 2.4E-07 8.1E-12 71.7 9.4 79 23-114 165-249 (401)
49 1fc4_A 2-amino-3-ketobutyrate 98.6 8.9E-08 3.1E-12 74.0 6.8 81 23-114 162-248 (401)
50 3dyd_A Tyrosine aminotransfera 98.6 2E-07 6.7E-12 73.7 8.6 71 41-114 191-264 (427)
51 2zc0_A Alanine glyoxylate tran 98.6 4E-07 1.4E-11 70.4 10.0 74 40-114 173-248 (407)
52 1yiz_A Kynurenine aminotransfe 98.6 1E-07 3.5E-12 74.6 6.7 71 40-113 181-255 (429)
53 3fdb_A Beta C-S lyase, putativ 98.6 7.7E-08 2.6E-12 73.4 5.7 80 23-114 141-224 (377)
54 3a2b_A Serine palmitoyltransfe 98.5 4.4E-07 1.5E-11 70.2 9.0 79 23-114 160-244 (398)
55 1ajs_A Aspartate aminotransfer 98.5 3.5E-07 1.2E-11 71.0 8.2 81 24-114 172-259 (412)
56 2ez2_A Beta-tyrosinase, tyrosi 98.5 4.3E-07 1.5E-11 71.7 8.5 81 23-112 161-254 (456)
57 1ax4_A Tryptophanase; tryptoph 98.5 6.7E-07 2.3E-11 70.7 9.6 58 23-85 170-227 (467)
58 1iay_A ACC synthase 2, 1-amino 98.5 4.4E-07 1.5E-11 71.1 7.8 52 40-92 187-238 (428)
59 3aow_A Putative uncharacterize 98.4 8.7E-07 3E-11 71.0 9.3 72 40-114 215-290 (448)
60 1v2d_A Glutamine aminotransfer 98.4 4.1E-07 1.4E-11 69.9 6.9 70 40-113 151-222 (381)
61 3e2y_A Kynurenine-oxoglutarate 98.4 5.8E-07 2E-11 69.4 7.6 52 40-92 166-217 (410)
62 1c7n_A Cystalysin; transferase 98.4 5.5E-07 1.9E-11 69.5 7.2 52 40-92 163-214 (399)
63 3fvs_A Kynurenine--oxoglutarat 98.4 6.7E-07 2.3E-11 69.5 7.6 52 40-92 173-224 (422)
64 1vp4_A Aminotransferase, putat 98.4 1E-06 3.5E-11 69.2 8.7 74 40-114 186-261 (425)
65 1d2f_A MALY protein; aminotran 98.4 5.8E-07 2E-11 69.3 7.1 51 41-92 162-212 (390)
66 1svv_A Threonine aldolase; str 98.4 6.4E-07 2.2E-11 67.4 7.1 82 23-112 129-213 (359)
67 3kax_A Aminotransferase, class 98.4 5.9E-07 2E-11 68.5 7.0 52 40-92 155-206 (383)
68 2ctz_A O-acetyl-L-homoserine s 98.4 6.8E-07 2.3E-11 71.1 7.6 62 40-113 143-206 (421)
69 2gb3_A Aspartate aminotransfer 98.4 9.7E-07 3.3E-11 68.9 8.3 70 40-114 173-245 (409)
70 3nra_A Aspartate aminotransfer 98.4 5.3E-07 1.8E-11 69.4 6.6 70 43-114 182-254 (407)
71 2zyj_A Alpha-aminodipate amino 98.4 5.3E-07 1.8E-11 69.9 6.0 61 23-92 152-213 (397)
72 3euc_A Histidinol-phosphate am 98.4 5.8E-07 2E-11 68.6 6.2 80 23-114 147-228 (367)
73 2oqx_A Tryptophanase; lyase, p 98.4 4.1E-07 1.4E-11 71.9 5.5 58 23-85 170-227 (467)
74 2ay1_A Aroat, aromatic amino a 98.4 8.1E-07 2.8E-11 68.4 7.0 62 23-91 157-218 (394)
75 3b46_A Aminotransferase BNA3; 98.4 8.6E-07 2.9E-11 70.5 7.1 72 40-114 200-275 (447)
76 2o0r_A RV0858C (N-succinyldiam 98.3 8.4E-07 2.9E-11 69.2 6.8 52 40-92 159-210 (411)
77 2q7w_A Aspartate aminotransfer 98.3 7.1E-07 2.4E-11 68.6 5.9 81 24-114 161-247 (396)
78 3b1d_A Betac-S lyase; HET: PLP 97.7 6.6E-08 2.3E-12 75.0 0.0 71 41-114 164-239 (392)
79 1j32_A Aspartate aminotransfer 98.3 1.2E-06 3.9E-11 67.4 7.0 72 40-114 162-238 (388)
80 3jtx_A Aminotransferase; NP_28 98.3 1.1E-06 3.8E-11 67.5 6.5 71 41-114 168-246 (396)
81 1u08_A Hypothetical aminotrans 98.3 1.1E-06 3.7E-11 67.7 6.2 71 40-113 162-236 (386)
82 3ezs_A Aminotransferase ASPB; 98.3 1.3E-06 4.3E-11 66.8 6.2 69 42-114 155-232 (376)
83 3qgu_A LL-diaminopimelate amin 98.3 2E-06 6.9E-11 67.7 7.3 73 41-114 209-283 (449)
84 2r2n_A Kynurenine/alpha-aminoa 98.3 2.9E-06 9.9E-11 66.8 8.0 72 40-114 189-264 (425)
85 1lc5_A COBD, L-threonine-O-3-p 98.3 2.5E-06 8.7E-11 65.2 7.5 70 41-114 146-217 (364)
86 3h14_A Aminotransferase, class 98.3 1.7E-06 5.8E-11 66.7 6.5 51 41-92 161-211 (391)
87 3f0h_A Aminotransferase; RER07 98.2 1.5E-06 5E-11 66.3 5.9 65 40-114 143-207 (376)
88 1gd9_A Aspartate aminotransfer 98.2 2.8E-06 9.6E-11 65.3 7.4 52 40-92 159-210 (389)
89 4dq6_A Putative pyridoxal phos 98.2 1.3E-06 4.3E-11 66.8 5.1 50 42-92 165-214 (391)
90 1xi9_A Putative transaminase; 98.2 3.9E-06 1.3E-10 65.2 8.0 59 40-100 173-231 (406)
91 1cs1_A CGS, protein (cystathio 98.2 3.7E-06 1.3E-10 65.2 7.7 47 40-90 136-182 (386)
92 1o4s_A Aspartate aminotransfer 98.2 3.9E-06 1.3E-10 65.0 7.6 52 40-92 173-224 (389)
93 3kgw_A Alanine-glyoxylate amin 98.2 1.5E-06 5.1E-11 66.1 5.1 71 23-113 138-210 (393)
94 3ke3_A Putative serine-pyruvat 98.2 2.2E-06 7.5E-11 66.6 5.9 75 23-113 125-199 (379)
95 3asa_A LL-diaminopimelate amin 98.2 4E-06 1.4E-10 65.2 7.3 52 40-92 162-213 (400)
96 3qhx_A Cystathionine gamma-syn 98.2 3.8E-06 1.3E-10 66.2 6.9 61 40-113 150-212 (392)
97 3lvm_A Cysteine desulfurase; s 98.2 5.4E-06 1.8E-10 64.2 7.6 61 40-112 162-222 (423)
98 2x5d_A Probable aminotransfera 98.2 3.9E-06 1.3E-10 65.3 6.7 70 41-114 172-246 (412)
99 3f9t_A TDC, L-tyrosine decarbo 98.1 5E-06 1.7E-10 63.0 7.0 54 23-88 161-214 (397)
100 1bw0_A TAT, protein (tyrosine 98.1 7.1E-06 2.4E-10 63.7 7.7 49 42-92 179-227 (416)
101 2dou_A Probable N-succinyldiam 98.1 4E-06 1.4E-10 64.2 6.3 51 41-92 158-208 (376)
102 3nmy_A Xometc, cystathionine g 98.1 3.9E-06 1.3E-10 66.9 6.0 42 40-85 151-192 (400)
103 2z61_A Probable aspartate amin 98.1 5.3E-06 1.8E-10 63.4 6.4 48 40-92 153-200 (370)
104 3ez1_A Aminotransferase MOCR f 98.1 3.6E-06 1.2E-10 65.6 5.4 57 23-86 161-218 (423)
105 2o1b_A Aminotransferase, class 98.1 3.8E-06 1.3E-10 65.7 4.9 71 41-114 181-254 (404)
106 3ftb_A Histidinol-phosphate am 98.0 1.2E-05 4.1E-10 60.8 7.1 48 42-90 145-192 (361)
107 3gbx_A Serine hydroxymethyltra 98.0 8.3E-06 2.8E-10 62.8 5.9 71 23-114 159-233 (420)
108 3ele_A Amino transferase; RER0 98.0 1.2E-05 3.9E-10 62.0 6.6 72 40-114 171-249 (398)
109 3zrp_A Serine-pyruvate aminotr 98.0 1.7E-05 5.7E-10 60.1 7.4 70 23-112 117-186 (384)
110 2cb1_A O-acetyl homoserine sul 98.0 1.4E-05 4.8E-10 62.9 7.1 62 40-113 139-202 (412)
111 1vjo_A Alanine--glyoxylate ami 98.0 7.4E-06 2.5E-10 62.8 5.3 61 41-113 159-221 (393)
112 1qz9_A Kynureninase; kynurenin 98.0 2.4E-05 8.1E-10 60.4 8.1 61 40-112 164-224 (416)
113 4eu1_A Mitochondrial aspartate 98.0 2.4E-05 8.3E-10 60.8 8.2 82 23-114 171-259 (409)
114 2dr1_A PH1308 protein, 386AA l 98.0 2.1E-05 7.3E-10 59.7 7.7 73 23-114 135-209 (386)
115 2x5f_A Aspartate_tyrosine_phen 98.0 2.8E-05 9.6E-10 60.8 8.2 62 23-92 177-244 (430)
116 1kmj_A Selenocysteine lyase; p 98.0 2.2E-05 7.6E-10 59.8 7.5 62 40-113 163-226 (406)
117 3ecd_A Serine hydroxymethyltra 98.0 8.8E-06 3E-10 62.8 5.2 71 23-114 162-236 (425)
118 3ffh_A Histidinol-phosphate am 97.9 9.6E-06 3.3E-10 61.7 5.0 69 40-114 154-226 (363)
119 3g0t_A Putative aminotransfera 97.9 2.3E-05 7.9E-10 61.0 7.0 49 41-91 182-231 (437)
120 3d6k_A Putative aminotransfera 97.9 1.2E-05 4.2E-10 63.1 5.5 73 40-114 177-259 (422)
121 1t3i_A Probable cysteine desul 97.9 4E-05 1.4E-09 58.8 8.1 61 40-112 168-228 (420)
122 1yaa_A Aspartate aminotransfer 97.9 2.2E-05 7.5E-10 60.9 6.7 60 24-91 165-225 (412)
123 3ppl_A Aspartate aminotransfer 97.9 1.1E-05 3.9E-10 63.1 5.1 73 40-114 179-261 (427)
124 2yrr_A Aminotransferase, class 97.9 3.9E-05 1.3E-09 57.2 7.5 60 41-112 124-183 (353)
125 2dkj_A Serine hydroxymethyltra 97.9 1.8E-05 6E-10 60.9 5.7 70 23-113 153-226 (407)
126 3pj0_A LMO0305 protein; struct 97.9 1.1E-05 3.9E-10 61.0 4.5 46 40-85 136-181 (359)
127 1elu_A L-cysteine/L-cystine C- 97.9 3.7E-05 1.3E-09 58.4 7.2 62 40-113 153-220 (390)
128 3mad_A Sphingosine-1-phosphate 97.9 2.2E-05 7.4E-10 63.6 6.0 44 40-87 238-281 (514)
129 1eg5_A Aminotransferase; PLP-d 97.9 6.4E-05 2.2E-09 56.8 8.3 62 40-113 138-203 (384)
130 3t18_A Aminotransferase class 97.8 4.1E-05 1.4E-09 59.4 7.4 51 41-92 178-235 (413)
131 3n0l_A Serine hydroxymethyltra 97.8 2.8E-05 9.7E-10 59.9 6.4 72 23-114 154-228 (417)
132 3ei9_A LL-diaminopimelate amin 97.8 3.8E-05 1.3E-09 60.1 7.0 51 41-92 198-248 (432)
133 3ndn_A O-succinylhomoserine su 97.8 1.5E-05 5.2E-10 63.8 4.8 42 40-85 165-206 (414)
134 3acz_A Methionine gamma-lyase; 97.8 3.9E-05 1.3E-09 60.0 7.1 61 40-113 143-205 (389)
135 1fg7_A Histidinol phosphate am 97.8 4E-05 1.4E-09 58.9 6.9 69 41-114 146-215 (356)
136 3rq1_A Aminotransferase class 97.8 3.9E-05 1.3E-09 59.7 6.8 71 41-114 179-263 (418)
137 3ly1_A Putative histidinol-pho 97.8 2.6E-05 8.9E-10 58.9 5.6 61 23-92 130-190 (354)
138 4f4e_A Aromatic-amino-acid ami 97.8 9.1E-05 3.1E-09 57.9 8.8 62 23-91 183-244 (420)
139 2vi8_A Serine hydroxymethyltra 97.8 2.9E-05 9.8E-10 59.6 5.8 72 23-114 153-227 (405)
140 2jis_A Cysteine sulfinic acid 97.8 7.7E-05 2.6E-09 60.6 8.6 65 40-111 258-323 (515)
141 3nnk_A Ureidoglycine-glyoxylat 97.8 1.1E-05 3.8E-10 61.9 3.3 70 23-112 128-197 (411)
142 2z9v_A Aspartate aminotransfer 97.8 7.1E-05 2.4E-09 57.1 7.6 71 23-112 123-193 (392)
143 2rfv_A Methionine gamma-lyase; 97.8 5.9E-05 2E-09 58.7 7.1 44 40-87 148-191 (398)
144 3fsl_A Aromatic-amino-acid ami 97.7 9.3E-05 3.2E-09 56.7 7.7 61 23-90 161-221 (397)
145 1gc0_A Methionine gamma-lyase; 97.7 3.9E-05 1.3E-09 60.0 5.5 44 40-87 149-192 (398)
146 2e7j_A SEP-tRNA:Cys-tRNA synth 97.7 0.00017 5.7E-09 54.6 8.8 75 23-113 133-209 (371)
147 2qma_A Diaminobutyrate-pyruvat 97.7 0.00013 4.3E-09 58.9 8.6 65 41-113 258-325 (497)
148 1v72_A Aldolase; PLP-dependent 97.7 4.5E-05 1.5E-09 57.2 5.3 45 41-87 141-185 (356)
149 1m32_A 2-aminoethylphosphonate 97.7 0.00016 5.5E-09 54.1 8.0 72 23-113 120-193 (366)
150 1o69_A Aminotransferase; struc 97.7 5.7E-05 2E-09 58.7 5.6 72 23-113 110-182 (394)
151 3g7q_A Valine-pyruvate aminotr 97.6 9.9E-05 3.4E-09 56.9 6.5 47 40-87 179-225 (417)
152 3if2_A Aminotransferase; YP_26 97.6 0.00012 4E-09 57.3 6.7 46 40-86 205-250 (444)
153 3isl_A Purine catabolism prote 97.6 8.9E-05 3.1E-09 56.9 5.8 51 23-85 126-176 (416)
154 3lws_A Aromatic amino acid bet 97.6 3.8E-05 1.3E-09 58.2 3.7 44 42-85 136-179 (357)
155 2ch1_A 3-hydroxykynurenine tra 97.6 6.7E-05 2.3E-09 57.4 5.0 60 41-112 143-202 (396)
156 3vax_A Putative uncharacterize 97.6 0.00017 5.8E-09 55.2 7.3 60 40-112 158-217 (400)
157 3cq5_A Histidinol-phosphate am 97.6 0.00019 6.4E-09 55.0 7.2 68 41-114 164-232 (369)
158 3meb_A Aspartate aminotransfer 97.6 0.00023 8E-09 56.6 8.0 61 24-91 191-251 (448)
159 1qgn_A Protein (cystathionine 97.6 0.00026 8.8E-09 57.6 8.3 67 24-111 191-257 (445)
160 2huf_A Alanine glyoxylate amin 97.6 8.3E-05 2.9E-09 56.8 5.1 60 41-112 144-203 (393)
161 3cai_A Possible aminotransfera 97.6 0.00019 6.4E-09 55.2 7.0 61 40-112 164-224 (406)
162 1pff_A Methionine gamma-lyase; 97.6 8.6E-05 2.9E-09 55.8 5.0 43 40-86 82-125 (331)
163 2bkw_A Alanine-glyoxylate amin 97.6 0.00025 8.5E-09 53.7 7.5 60 41-112 137-198 (385)
164 3ht4_A Aluminum resistance pro 97.6 0.00024 8.2E-09 57.4 7.9 53 40-92 164-218 (431)
165 3nyt_A Aminotransferase WBPE; 97.5 7.4E-05 2.5E-09 57.3 4.5 58 40-112 122-180 (367)
166 3h7f_A Serine hydroxymethyltra 97.5 0.00014 4.8E-09 57.9 5.8 30 63-92 201-231 (447)
167 3frk_A QDTB; aminotransferase, 97.5 0.0002 6.9E-09 54.8 6.4 59 40-112 123-181 (373)
168 2x3l_A ORN/Lys/Arg decarboxyla 97.5 0.00016 5.3E-09 58.1 6.0 63 40-112 145-208 (446)
169 3hdo_A Histidinol-phosphate am 97.5 0.00015 5E-09 55.3 5.4 64 44-114 152-215 (360)
170 3uwc_A Nucleotide-sugar aminot 97.5 0.00019 6.7E-09 54.5 6.1 59 40-112 124-182 (374)
171 2okj_A Glutamate decarboxylase 97.4 0.00065 2.2E-08 54.8 8.9 66 40-112 244-310 (504)
172 1wyu_B Glycine dehydrogenase s 97.4 0.00018 6.3E-09 57.8 5.7 63 40-113 202-266 (474)
173 3b8x_A WBDK, pyridoxamine 5-ph 97.4 0.00022 7.5E-09 55.0 5.5 59 40-113 127-186 (390)
174 3e9k_A Kynureninase; kynurenin 97.4 0.00046 1.6E-08 54.7 7.3 53 23-85 202-254 (465)
175 3mc6_A Sphingosine-1-phosphate 97.4 8E-05 2.7E-09 59.6 2.9 47 40-90 205-251 (497)
176 1n8p_A Cystathionine gamma-lya 97.3 0.00042 1.4E-08 54.5 6.5 46 40-89 137-186 (393)
177 1jg8_A L-ALLO-threonine aldola 97.3 0.00056 1.9E-08 51.4 6.7 45 41-85 132-176 (347)
178 3a9z_A Selenocysteine lyase; P 97.3 0.00038 1.3E-08 54.1 5.9 62 40-113 174-247 (432)
179 3ri6_A O-acetylhomoserine sulf 97.2 0.00071 2.4E-08 54.6 6.9 42 40-85 166-207 (430)
180 1iug_A Putative aspartate amin 97.2 0.00076 2.6E-08 50.4 6.6 60 41-112 121-182 (352)
181 3dr4_A Putative perosamine syn 97.2 0.0004 1.4E-08 53.4 5.1 59 40-112 143-201 (391)
182 3f6t_A Aspartate aminotransfer 97.2 0.0007 2.4E-08 55.6 6.3 70 40-113 243-313 (533)
183 1e5e_A MGL, methionine gamma-l 97.1 0.0011 3.7E-08 52.2 7.1 45 40-88 146-191 (404)
184 1mdo_A ARNB aminotransferase; 97.1 0.0005 1.7E-08 52.6 5.0 57 40-112 126-183 (393)
185 1b5p_A Protein (aspartate amin 97.1 0.0015 5.3E-08 50.2 7.7 50 40-91 163-213 (385)
186 7aat_A Aspartate aminotransfer 97.1 0.0017 5.7E-08 49.9 7.8 51 40-91 174-224 (401)
187 1ibj_A CBL, cystathionine beta 97.1 0.0012 4.1E-08 53.6 7.0 43 40-86 216-258 (464)
188 2po3_A 4-dehydrase; external a 97.1 0.00098 3.3E-08 52.1 6.1 58 40-112 137-195 (424)
189 2fnu_A Aminotransferase; prote 97.1 0.0015 5.1E-08 49.3 7.0 40 40-86 120-159 (375)
190 3cog_A Cystathionine gamma-lya 97.0 0.001 3.5E-08 52.5 6.0 44 40-87 150-194 (403)
191 4hvk_A Probable cysteine desul 97.0 0.0011 3.6E-08 49.8 5.7 41 40-85 137-177 (382)
192 4eb5_A Probable cysteine desul 96.9 0.0018 6.2E-08 48.8 6.2 60 40-112 137-196 (382)
193 2oga_A Transaminase; PLP-depen 96.8 0.0017 5.9E-08 50.3 5.7 58 40-112 150-208 (399)
194 3get_A Histidinol-phosphate am 96.8 0.00099 3.4E-08 50.5 4.2 47 40-88 152-198 (365)
195 3bb8_A CDP-4-keto-6-deoxy-D-gl 96.6 0.0039 1.4E-07 49.0 6.4 58 40-112 157-215 (437)
196 2aeu_A Hypothetical protein MJ 96.5 0.0047 1.6E-07 48.0 5.7 43 40-85 139-182 (374)
197 1b9h_A AHBA synthase, protein 96.5 0.0023 7.7E-08 49.0 3.9 46 40-92 125-171 (388)
198 2c81_A Glutamine-2-deoxy-scyll 96.4 0.0045 1.5E-07 48.1 5.3 42 40-88 129-170 (418)
199 2fq6_A Cystathionine beta-lyas 96.3 0.012 4.2E-07 46.9 7.4 42 40-85 166-209 (415)
200 3tcm_A Alanine aminotransferas 96.2 0.013 4.3E-07 47.5 7.4 48 41-89 237-284 (500)
201 2zy4_A L-aspartate beta-decarb 96.2 0.0074 2.5E-07 50.0 5.9 50 40-90 244-295 (546)
202 3ihj_A Alanine aminotransferas 96.1 0.022 7.4E-07 46.2 8.0 61 23-89 221-282 (498)
203 3fkd_A L-threonine-O-3-phospha 95.9 0.0057 1.9E-07 46.1 3.7 50 40-92 128-177 (350)
204 1uu1_A Histidinol-phosphate am 95.9 0.0097 3.3E-07 44.7 4.7 64 41-114 138-203 (335)
205 3vp6_A Glutamate decarboxylase 95.7 0.05 1.7E-06 44.3 8.6 43 41-87 248-290 (511)
206 3k7y_A Aspartate aminotransfer 95.7 0.035 1.2E-06 44.1 7.5 58 24-89 163-221 (405)
207 3ffr_A Phosphoserine aminotran 95.6 0.0051 1.7E-07 45.9 2.1 43 40-86 129-172 (362)
208 3hvy_A Cystathionine beta-lyas 95.0 0.13 4.6E-06 41.4 8.9 58 23-87 165-224 (427)
209 4e1o_A HDC, histidine decarbox 94.8 0.16 5.4E-06 40.8 8.9 43 42-88 242-284 (481)
210 3i16_A Aluminum resistance pro 94.8 0.16 5.3E-06 41.1 8.9 58 23-87 165-224 (427)
211 1rv3_A Serine hydroxymethyltra 94.5 0.064 2.2E-06 43.2 5.8 49 23-85 183-231 (483)
212 3jzl_A Putative cystathionine 94.4 0.14 4.8E-06 40.9 7.6 47 40-86 158-206 (409)
213 3k40_A Aromatic-L-amino-acid d 94.1 0.27 9.1E-06 39.5 8.8 42 42-87 235-276 (475)
214 2z67_A O-phosphoseryl-tRNA(SEC 93.6 0.27 9.3E-06 39.0 7.9 44 40-87 230-273 (456)
215 1js3_A DDC;, DOPA decarboxylas 93.2 0.35 1.2E-05 38.4 7.8 27 62-88 252-278 (486)
216 4h51_A Aspartate aminotransfer 93.1 0.33 1.1E-05 39.0 7.6 45 45-89 193-237 (420)
217 3hl2_A O-phosphoseryl-tRNA(SEC 93.0 0.19 6.6E-06 42.3 6.3 56 22-86 202-257 (501)
218 3p1t_A Putative histidinol-pho 92.8 0.11 3.7E-06 38.4 4.1 46 42-92 136-181 (337)
219 3bc8_A O-phosphoseryl-tRNA(SEC 92.7 0.23 7.9E-06 40.9 6.2 57 22-87 184-240 (450)
220 3hbx_A GAD 1, glutamate decarb 90.0 0.6 2.1E-05 37.7 6.1 43 41-87 202-250 (502)
221 2dgk_A GAD-beta, GADB, glutama 89.8 0.61 2.1E-05 36.6 5.8 43 41-87 187-235 (452)
222 2vyc_A Biodegradative arginine 89.8 0.46 1.6E-05 41.0 5.5 38 43-86 315-352 (755)
223 3ju7_A Putative PLP-dependent 87.8 0.38 1.3E-05 37.3 3.3 21 64-85 145-165 (377)
224 1wyu_A Glycine dehydrogenase ( 86.6 1.3 4.5E-05 34.5 5.8 39 40-83 195-235 (438)
225 2a7v_A Serine hydroxymethyltra 84.9 0.63 2.1E-05 38.2 3.3 22 64-85 220-241 (490)
226 1c4k_A Protein (ornithine deca 84.8 2.1 7.3E-05 36.9 6.7 38 43-86 284-321 (730)
227 1w23_A Phosphoserine aminotran 84.8 0.24 8.3E-06 36.9 0.7 40 40-88 140-179 (360)
228 2fyf_A PSAT, phosphoserine ami 62.8 2.2 7.4E-05 32.5 0.8 42 40-88 164-205 (398)
229 1k7c_A Rhamnogalacturonan acet 59.1 29 0.001 24.5 6.4 37 43-79 127-167 (233)
230 3n75_A LDC, lysine decarboxyla 56.9 18 0.0006 31.3 5.6 54 22-87 282-336 (715)
231 3o63_A Probable thiamine-phosp 53.8 10 0.00036 28.3 3.3 20 64-83 85-105 (243)
232 1jzt_A Hypothetical 27.5 kDa p 51.3 39 0.0013 25.1 6.1 61 43-110 133-196 (246)
233 3p8k_A Hydrolase, carbon-nitro 50.9 66 0.0023 23.6 7.3 55 21-81 38-101 (281)
234 2o8n_A APOA-I binding protein; 47.5 35 0.0012 25.9 5.4 59 43-110 151-210 (265)
235 2qen_A Walker-type ATPase; unk 47.5 15 0.00051 26.8 3.2 25 61-85 114-139 (350)
236 3vup_A Beta-1,4-mannanase; TIM 45.8 17 0.00057 25.9 3.2 22 64-85 92-113 (351)
237 3bww_A Protein of unknown func 45.7 23 0.00078 27.9 4.1 40 45-84 57-97 (307)
238 3gi1_A LBP, laminin-binding pr 42.9 1E+02 0.0035 23.0 7.8 30 57-86 210-239 (286)
239 4a1f_A DNAB helicase, replicat 40.8 73 0.0025 24.7 6.4 40 41-80 156-201 (338)
240 3ivz_A Nitrilase; alpha-beta s 38.6 71 0.0024 23.0 5.8 39 43-81 35-86 (262)
241 2q6t_A DNAB replication FORK h 37.2 1E+02 0.0035 24.2 6.8 40 41-80 310-358 (444)
242 7a3h_A Endoglucanase; hydrolas 37.1 27 0.00094 26.0 3.3 25 61-85 79-103 (303)
243 1qnr_A Endo-1,4-B-D-mannanase; 36.8 28 0.00096 25.7 3.3 23 61-83 89-111 (344)
244 3bh0_A DNAB-like replicative h 36.3 1.2E+02 0.0042 22.6 6.9 44 41-84 179-231 (315)
245 3pzt_A Endoglucanase; alpha/be 36.0 29 0.00098 26.4 3.3 53 22-82 71-125 (327)
246 1q57_A DNA primase/helicase; d 35.5 1.3E+02 0.0044 23.9 7.2 45 40-84 353-404 (503)
247 1bqc_A Protein (beta-mannanase 35.2 33 0.0011 25.2 3.5 22 60-81 63-84 (302)
248 1pq4_A Periplasmic binding pro 34.7 1E+02 0.0035 23.0 6.2 30 57-86 219-248 (291)
249 3v7e_A Ribosome-associated pro 34.5 41 0.0014 20.7 3.3 27 59-85 37-63 (82)
250 3zs7_A Pyridoxal kinase; trans 34.3 14 0.00047 28.0 1.2 34 43-76 112-145 (300)
251 4gqr_A Pancreatic alpha-amylas 34.0 34 0.0012 26.4 3.5 25 61-85 76-100 (496)
252 1tvn_A Cellulase, endoglucanas 34.0 32 0.0011 25.2 3.2 22 62-83 79-100 (293)
253 3nl6_A Thiamine biosynthetic b 33.2 28 0.00097 29.0 3.0 22 61-82 55-76 (540)
254 1egz_A Endoglucanase Z, EGZ, C 31.9 36 0.0012 24.8 3.2 21 62-82 77-97 (291)
255 2w0m_A SSO2452; RECA, SSPF, un 31.2 59 0.002 22.0 4.0 28 61-88 107-137 (235)
256 3bgw_A DNAB-like replicative h 31.2 1.4E+02 0.0049 23.7 6.8 40 41-80 308-355 (444)
257 1lwj_A 4-alpha-glucanotransfer 30.9 59 0.002 25.4 4.4 31 61-91 69-99 (441)
258 4hty_A Cellulase; (alpha/beta) 30.7 37 0.0013 25.9 3.2 23 61-83 120-142 (359)
259 2c0h_A Mannan endo-1,4-beta-ma 30.6 39 0.0013 25.0 3.2 20 62-81 91-110 (353)
260 2whl_A Beta-mannanase, baman5; 30.2 40 0.0014 24.7 3.2 24 59-82 61-84 (294)
261 2r2a_A Uncharacterized protein 29.6 24 0.00082 25.2 1.8 17 71-87 84-100 (199)
262 1f89_A 32.5 kDa protein YLR351 29.5 1.5E+02 0.0053 21.4 6.3 38 43-80 46-96 (291)
263 3rss_A Putative uncharacterize 29.3 1.3E+02 0.0043 24.8 6.3 61 43-110 121-182 (502)
264 1vhx_A Putative holliday junct 28.9 1.1E+02 0.0038 20.8 5.2 57 22-86 44-102 (150)
265 2cks_A Endoglucanase E-5; carb 28.7 39 0.0013 25.0 2.9 23 62-84 80-102 (306)
266 1uf5_A N-carbamyl-D-amino acid 28.4 63 0.0021 23.6 4.0 37 44-80 40-93 (303)
267 2vhj_A Ntpase P4, P4; non- hyd 28.2 43 0.0015 26.4 3.2 24 61-85 170-193 (331)
268 1o51_A Hypothetical protein TM 28.1 58 0.002 21.6 3.4 45 60-107 28-73 (114)
269 1h1n_A Endo type cellulase ENG 27.9 46 0.0016 24.6 3.2 22 62-83 72-93 (305)
270 3dc7_A Putative uncharacterize 27.8 1.4E+02 0.0049 20.2 6.9 19 61-79 160-178 (232)
271 1ece_A Endocellulase E1; glyco 27.6 47 0.0016 24.8 3.2 25 60-84 93-117 (358)
272 1to3_A Putative aldolase YIHT; 27.6 41 0.0014 25.8 2.9 23 62-84 142-164 (304)
273 3cg6_A Growth arrest and DNA-d 27.5 50 0.0017 23.3 3.1 38 42-83 45-85 (146)
274 3bzy_B ESCU; auto cleavage pro 27.5 42 0.0014 21.2 2.5 25 61-85 26-50 (83)
275 1g01_A Endoglucanase; alpha/be 27.2 47 0.0016 25.3 3.2 23 62-84 90-112 (364)
276 2i5b_A Phosphomethylpyrimidine 27.1 1.7E+02 0.0058 20.8 6.5 26 59-84 84-110 (271)
277 1ceo_A Cellulase CELC; glycosy 26.9 49 0.0017 24.6 3.2 25 61-85 68-92 (343)
278 2dcl_A Hypothetical UPF0166 pr 26.9 59 0.002 22.0 3.3 47 59-108 23-70 (127)
279 2prs_A High-affinity zinc upta 26.8 1.9E+02 0.0065 21.3 7.5 29 57-85 205-233 (284)
280 1h4p_A Glucan 1,3-beta-glucosi 26.4 48 0.0016 26.1 3.2 24 60-83 112-135 (408)
281 1rh9_A Endo-beta-mannanase; en 26.4 50 0.0017 24.8 3.2 21 61-81 84-104 (373)
282 3dgp_A RNA polymerase II trans 26.1 86 0.003 19.8 3.8 35 43-85 22-56 (80)
283 3n9k_A Glucan 1,3-beta-glucosi 25.6 51 0.0017 26.2 3.2 23 60-82 111-133 (399)
284 2c0r_A PSAT, phosphoserine ami 25.4 32 0.0011 25.3 1.9 37 40-85 141-177 (362)
285 3nco_A Endoglucanase fncel5A; 25.2 55 0.0019 24.2 3.2 22 61-82 81-102 (320)
286 2o1e_A YCDH; alpha-beta protei 25.1 1.3E+02 0.0044 22.8 5.3 30 57-86 221-250 (312)
287 1uuq_A Mannosyl-oligosaccharid 25.0 53 0.0018 25.7 3.2 21 62-82 111-131 (440)
288 2e11_A Hydrolase; dimethylarse 25.0 1.2E+02 0.0041 21.7 4.9 37 44-80 37-81 (266)
289 1w41_A 50S ribosomal protein L 24.9 72 0.0025 20.1 3.3 22 59-80 42-63 (101)
290 2lbw_A H/ACA ribonucleoprotein 24.8 57 0.0019 21.5 2.9 27 59-85 47-73 (121)
291 2w1v_A Nitrilase-2, nitrilase 24.8 1.2E+02 0.004 21.9 4.9 37 44-80 37-82 (276)
292 2k4m_A TR8_protein, UPF0146 pr 24.7 57 0.0019 23.2 3.0 24 57-80 96-119 (153)
293 1vjz_A Endoglucanase; TM1752, 24.2 61 0.0021 24.1 3.3 25 60-84 75-99 (341)
294 1bm4_A Protein (moloney murine 24.0 38 0.0013 18.1 1.5 18 57-74 12-29 (32)
295 3sr7_A Isopentenyl-diphosphate 24.0 51 0.0017 26.1 2.9 24 61-84 192-215 (365)
296 2guy_A Alpha-amylase A; (beta- 23.7 87 0.003 24.6 4.2 28 61-88 97-124 (478)
297 3aof_A Endoglucanase; glycosyl 23.7 62 0.0021 23.6 3.2 22 61-82 73-94 (317)
298 1wpc_A Glucan 1,4-alpha-maltoh 23.6 65 0.0022 25.5 3.5 25 61-85 82-106 (485)
299 3t7y_A YOP proteins translocat 23.6 56 0.0019 21.3 2.6 25 61-85 41-65 (97)
300 3ou5_A Serine hydroxymethyltra 23.5 53 0.0018 27.4 3.0 22 64-85 220-241 (490)
301 3qr3_A Endoglucanase EG-II; TI 23.3 61 0.0021 25.0 3.2 24 61-84 83-106 (340)
302 2je8_A Beta-mannosidase; glyco 23.0 62 0.0021 28.2 3.4 24 55-82 374-397 (848)
303 2vt1_B Surface presentation of 22.9 57 0.0019 21.1 2.5 25 61-85 26-50 (93)
304 2z43_A DNA repair and recombin 22.8 1.9E+02 0.0064 21.5 5.8 47 40-86 202-260 (324)
305 2dyu_A Formamidase; AMIF, CEK, 22.7 2.5E+02 0.0084 21.1 6.8 38 43-80 53-101 (334)
306 1jae_A Alpha-amylase; glycosid 22.7 55 0.0019 25.9 2.9 47 40-86 35-99 (471)
307 2wc7_A Alpha amylase, catalyti 22.7 61 0.0021 25.7 3.2 29 61-89 102-130 (488)
308 4aie_A Glucan 1,6-alpha-glucos 22.6 56 0.0019 25.8 2.9 25 61-85 79-103 (549)
309 1ub0_A THID, phosphomethylpyri 22.5 80 0.0027 22.3 3.5 26 59-84 80-106 (258)
310 1g94_A Alpha-amylase; beta-alp 22.5 70 0.0024 25.1 3.4 25 61-85 64-88 (448)
311 2ej9_A Putative biotin ligase; 22.2 27 0.00091 25.7 0.9 23 75-98 26-48 (237)
312 3c01_E Surface presentation of 22.2 62 0.0021 21.1 2.6 25 61-85 26-50 (98)
313 3jug_A Beta-mannanase; TIM-bar 22.1 84 0.0029 24.3 3.8 25 59-83 84-108 (345)
314 2nzl_A Hydroxyacid oxidase 1; 22.1 1.2E+02 0.0042 23.9 4.8 37 45-84 97-133 (392)
315 1ud2_A Amylase, alpha-amylase; 21.8 74 0.0025 25.1 3.5 26 60-85 79-104 (480)
316 3ayr_A Endoglucanase; TIM barr 21.7 61 0.0021 24.8 2.9 24 61-84 102-125 (376)
317 1d3c_A Cyclodextrin glycosyltr 21.5 94 0.0032 26.0 4.2 25 61-85 115-139 (686)
318 3hpd_A Hydroxyethylthiazole ki 21.4 71 0.0024 24.2 3.2 49 59-110 67-118 (265)
319 3rjt_A Lipolytic protein G-D-S 21.4 1.8E+02 0.0061 19.0 5.7 57 18-79 112-172 (216)
320 3bmv_A Cyclomaltodextrin gluca 21.0 98 0.0033 25.9 4.2 25 61-85 116-140 (683)
321 4aee_A Alpha amylase, catalyti 21.0 90 0.0031 26.2 4.0 25 61-85 311-335 (696)
322 1ht6_A AMY1, alpha-amylase iso 20.9 81 0.0028 24.4 3.5 47 41-87 34-94 (405)
323 2xzm_U Ribosomal protein L7AE 20.8 70 0.0024 21.5 2.7 22 60-81 52-73 (126)
324 1ua7_A Alpha-amylase; beta-alp 20.8 57 0.002 25.4 2.6 29 61-89 74-102 (422)
325 3l55_A B-1,4-endoglucanase/cel 20.8 77 0.0026 24.5 3.3 24 61-84 90-113 (353)
326 2r6a_A DNAB helicase, replicat 20.7 2.4E+02 0.0083 22.0 6.3 41 40-80 312-359 (454)
327 1mxg_A Alpha amylase; hyperthe 20.6 82 0.0028 24.7 3.5 29 60-88 85-113 (435)
328 3dhu_A Alpha-amylase; structur 20.6 82 0.0028 24.5 3.5 27 61-87 83-109 (449)
329 3ceu_A Thiamine phosphate pyro 20.6 22 0.00075 25.3 0.1 24 59-82 38-61 (210)
330 3j21_Z 50S ribosomal protein L 20.6 94 0.0032 19.5 3.2 22 59-80 41-63 (99)
331 3bh4_A Alpha-amylase; calcium, 20.6 82 0.0028 24.9 3.5 25 61-85 78-102 (483)
332 2yci_X 5-methyltetrahydrofolat 20.5 1.3E+02 0.0044 22.6 4.4 24 61-84 146-172 (271)
333 3cpq_A 50S ribosomal protein L 20.3 83 0.0028 20.2 2.9 20 60-79 48-67 (110)
334 1hvx_A Alpha-amylase; hydrolas 20.1 83 0.0028 25.3 3.5 27 61-87 81-107 (515)
335 2ioj_A Hypothetical protein AF 20.1 1.4E+02 0.0048 19.5 4.2 33 40-82 73-105 (139)
336 3lda_A DNA repair protein RAD5 20.1 3.2E+02 0.011 21.4 6.9 46 40-85 272-329 (400)
No 1
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.96 E-value=2.3e-30 Score=214.47 Aligned_cols=84 Identities=27% Similarity=0.415 Sum_probs=77.5
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
..+++.+.+. ++ +++||||+||+||++|+++|+++|++++|++|++||+|||+|||||||||||+ ||+++++|
T Consensus 223 ~~l~~~i~~~--~~---~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~-~fa~e~~g- 295 (473)
T 4e3q_A 223 RELEETIQRE--GA---DTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGN-TWGCVTYD- 295 (473)
T ss_dssp HHHHHHHHHH--CG---GGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSS-SCHHHHTT-
T ss_pred HHHHHHHHhh--CC---CceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccc-hhHHHhcC-
Confidence 4566666654 34 79999999999999999999999999999999999999999999999999998 99999999
Q ss_pred CCCcCEEEeecC
Q psy1628 103 DIIPDIVTVVWN 114 (114)
Q Consensus 103 ~v~PDivt~gK~ 114 (114)
++|||+|+||+
T Consensus 296 -v~PDi~t~~K~ 306 (473)
T 4e3q_A 296 -FTPDAIISSKN 306 (473)
T ss_dssp -CCCSEEEECGG
T ss_pred -CCCChHHhccc
Confidence 99999999995
No 2
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.96 E-value=2e-29 Score=207.85 Aligned_cols=72 Identities=36% Similarity=0.654 Sum_probs=70.7
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~gK~ 114 (114)
++|||+|+||+||++|+++|+++|++++|++|++||++||+|||||||||||+ ||+++++| ++|||+|+||+
T Consensus 225 ~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~-~~a~e~~g--v~PDivt~gK~ 296 (456)
T 4atq_A 225 DQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGE-WFAVDHEG--VVPDIITMAKG 296 (456)
T ss_dssp GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGTT--CCCSEEEECGG
T ss_pred CceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccc-cccccccC--CCCchhhhhhc
Confidence 79999999999999999999999999999999999999999999999999998 99999999 99999999995
No 3
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.92 E-value=3.2e-25 Score=183.26 Aligned_cols=81 Identities=19% Similarity=0.170 Sum_probs=75.7
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
+.+++.++++. +++||||+||+||++|+++|+++|+++||++|++||++||+|||||| |||. +|+++++|
T Consensus 208 ~~l~~~l~~~~------~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~-~~a~e~~g- 277 (454)
T 4ao9_A 208 QTARAQIERHG------PEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAP-HGLANKLG- 277 (454)
T ss_dssp HHHHHHHHHTG------GGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGST-TCHHHHHT-
T ss_pred HHHHHHHhhcC------CceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCcc-ccchhccC-
Confidence 46778888763 79999999999999999999999999999999999999999999995 9998 99999999
Q ss_pred CCCcCEEEeecC
Q psy1628 103 DIIPDIVTVVWN 114 (114)
Q Consensus 103 ~v~PDivt~gK~ 114 (114)
++||++|+||+
T Consensus 278 -v~PDi~t~gK~ 288 (454)
T 4ao9_A 278 -IRSDLTTLGKY 288 (454)
T ss_dssp -CCCSEEEEEGG
T ss_pred -CCCcEEEeccc
Confidence 99999999995
No 4
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.90 E-value=5.3e-24 Score=186.27 Aligned_cols=90 Identities=21% Similarity=0.238 Sum_probs=77.6
Q ss_pred HHHHHHHHHHHHhcC--CCCCCCCceEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccch
Q psy1628 19 AVVHLFFERIFLSAS--LYPFLFLYPCAFFAESL-QSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWW 95 (114)
Q Consensus 19 ~~~~~~~e~~~~~~~--~~~~~~~~iAAviiEPv-~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~ 95 (114)
..+.+.+|+.+++.. .++ +++||||+||+ ||+||+.++|++|+++++++|++||++||+|||+|||||||+ +|
T Consensus 573 ~~~~~~le~~l~~~~~~~~~---~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~-~f 648 (831)
T 4a0g_A 573 RIYSAYLSKHLQEHSGVRQS---AHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGV-ET 648 (831)
T ss_dssp HHHHHHHHHHC------------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSB-SS
T ss_pred HHHHHHHHHHHHhhhhhcCC---CcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCC-ch
Confidence 345567777776421 123 79999999997 999999999999999999999999999999999999999998 99
Q ss_pred hhhhcCCCCCcCEEEeecC
Q psy1628 96 AFQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 96 ~~~~~g~~v~PDivt~gK~ 114 (114)
+++++| ++||++|+||+
T Consensus 649 a~e~~g--v~PDiitlsK~ 665 (831)
T 4a0g_A 649 TTELLG--CKPDIACFAKL 665 (831)
T ss_dssp THHHHS--SCCSEEEECGG
T ss_pred hhHhcC--CCCcEEEEecc
Confidence 999999 99999999995
No 5
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.88 E-value=1.1e-22 Score=165.81 Aligned_cols=85 Identities=34% Similarity=0.527 Sum_probs=77.9
Q ss_pred HHHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcC
Q psy1628 22 HLFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQG 101 (114)
Q Consensus 22 ~~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g 101 (114)
.+.+|+.+++. ++ ++++++|+||+++.+|+++++++|+++|+++|++||+++|+|||+|||||+|+ +|++++++
T Consensus 209 ~~~le~~i~~~--~~---~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~-~~a~~~~~ 282 (472)
T 3hmu_A 209 ARELEEAILEL--GE---NRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGN-WFGTQTMG 282 (472)
T ss_dssp HHHHHHHHHHH--CG---GGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SCHHHHHT
T ss_pred HHHHHHHHHhc--CC---CCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCc-cchhHHhC
Confidence 35677777764 23 68999999999999999999999999999999999999999999999999998 89999999
Q ss_pred CCCCcCEEEeecC
Q psy1628 102 DDIIPDIVTVVWN 114 (114)
Q Consensus 102 ~~v~PDivt~gK~ 114 (114)
+.||++|+||+
T Consensus 283 --v~pdi~t~sK~ 293 (472)
T 3hmu_A 283 --IRPHIMTIAKG 293 (472)
T ss_dssp --CCCSEEEECGG
T ss_pred --CCCceeeechh
Confidence 99999999995
No 6
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.86 E-value=1e-21 Score=160.04 Aligned_cols=85 Identities=36% Similarity=0.574 Sum_probs=78.2
Q ss_pred HHHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhh-hc
Q psy1628 22 HLFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQ-LQ 100 (114)
Q Consensus 22 ~~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~-~~ 100 (114)
.+.+|+.+++. ++ ++++++|+||+++.+|+++++++|+++|+++|++||+++|+|||+|||||+|+ +|+++ ++
T Consensus 207 ~~~le~~i~~~--~~---~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~-~~~~~~~~ 280 (476)
T 3i5t_A 207 VQEFEDRIESL--GP---DTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGE-WFASEKVF 280 (476)
T ss_dssp HHHHHHHHHHH--CG---GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SCHHHHTT
T ss_pred HHHHHHHHHhc--CC---CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccC-ceeeeccc
Confidence 45778888764 23 68999999999999999999999999999999999999999999999999998 89999 99
Q ss_pred CCCCCcCEEEeecC
Q psy1628 101 GDDIIPDIVTVVWN 114 (114)
Q Consensus 101 g~~v~PDivt~gK~ 114 (114)
+ +.||++|+||+
T Consensus 281 ~--v~pdi~t~sK~ 292 (476)
T 3i5t_A 281 G--VVPDIITFAKG 292 (476)
T ss_dssp C--CCCSEEEECGG
T ss_pred C--CCcchhhhhhh
Confidence 9 99999999995
No 7
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.84 E-value=2.6e-21 Score=156.99 Aligned_cols=84 Identities=27% Similarity=0.388 Sum_probs=77.6
Q ss_pred HHHHHHHHHhcCCCCCCCCceEEEEEcc-cCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhc
Q psy1628 22 HLFFERIFLSASLYPFLFLYPCAFFAES-LQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQ 100 (114)
Q Consensus 22 ~~~~e~~~~~~~~~~~~~~~iAAviiEP-v~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~ 100 (114)
.+.+++.++++. ++++++++|| +++++|++.++++|+++++++|++||+++|+|||+|||||+|. +|+++++
T Consensus 220 ~~~le~~l~~~~------~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~-~~a~~~~ 292 (457)
T 3tfu_A 220 SAAFEAQLAQHA------GELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGA-LFAADHA 292 (457)
T ss_dssp HHHHHHHHHHHG------GGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSTHHHH
T ss_pred HHHHHHHHHhCC------CCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccc-hhHhHhc
Confidence 356777787652 6899999999 8999999999999999999999999999999999999999998 8999999
Q ss_pred CCCCCcCEEEeecC
Q psy1628 101 GDDIIPDIVTVVWN 114 (114)
Q Consensus 101 g~~v~PDivt~gK~ 114 (114)
+ +.||++|+||+
T Consensus 293 ~--~~pdiit~sK~ 304 (457)
T 3tfu_A 293 G--VSPDIMCVGKA 304 (457)
T ss_dssp T--CCCSEEEECGG
T ss_pred C--CCceEEEEChh
Confidence 9 99999999995
No 8
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.82 E-value=2.6e-20 Score=149.78 Aligned_cols=85 Identities=33% Similarity=0.528 Sum_probs=77.7
Q ss_pred HHHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcC
Q psy1628 22 HLFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQG 101 (114)
Q Consensus 22 ~~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g 101 (114)
.+.+|+.+++. ++ ++++++++||+++.+|..+++++|+++|+++|++||+++|+|||++||||+|+ +|++++++
T Consensus 207 ~~~le~~i~~~--~~---~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~-~~~~~~~~ 280 (460)
T 3gju_A 207 ADKLEEMILAE--GP---ETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGT-MFGSDHYG 280 (460)
T ss_dssp HHHHHHHHHHH--CG---GGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SCHHHHHT
T ss_pred HHHHHHHHHhc--CC---CCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc-cchHhhcC
Confidence 46677777764 23 68999999999999999999999999999999999999999999999999998 89999999
Q ss_pred CCCCcCEEEeecC
Q psy1628 102 DDIIPDIVTVVWN 114 (114)
Q Consensus 102 ~~v~PDivt~gK~ 114 (114)
+.||++|+||+
T Consensus 281 --~~pdi~t~sK~ 291 (460)
T 3gju_A 281 --IKPDLITIAKG 291 (460)
T ss_dssp --CCCSEEEECGG
T ss_pred --CCCCeeeeehh
Confidence 99999999995
No 9
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.82 E-value=2.7e-20 Score=149.65 Aligned_cols=85 Identities=36% Similarity=0.585 Sum_probs=77.9
Q ss_pred HHHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcC
Q psy1628 22 HLFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQG 101 (114)
Q Consensus 22 ~~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g 101 (114)
.+.+|+.+++. ++ ++++++++||+++++|...++++|+++++++|++||+++|+|||++||||+|+ +|++++++
T Consensus 205 ~~~le~~i~~~--~~---~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~-~~~~~~~~ 278 (459)
T 4a6r_A 205 ARWLEEKILEI--GA---DKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGE-WFGHQHFG 278 (459)
T ss_dssp HHHHHHHHHHH--CG---GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSHHHHHT
T ss_pred HHHHHHHHHHc--CC---CCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccc-cchHhhcC
Confidence 45678888764 23 68999999999999999999999999999999999999999999999999998 89999999
Q ss_pred CCCCcCEEEeecC
Q psy1628 102 DDIIPDIVTVVWN 114 (114)
Q Consensus 102 ~~v~PDivt~gK~ 114 (114)
+.||++|+||+
T Consensus 279 --~~pdi~t~sK~ 289 (459)
T 4a6r_A 279 --FQPDLFTAAKG 289 (459)
T ss_dssp --CCCSEEEECGG
T ss_pred --CCCCeeehhhh
Confidence 99999999995
No 10
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.82 E-value=2.7e-20 Score=148.97 Aligned_cols=83 Identities=24% Similarity=0.364 Sum_probs=76.5
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccC-CCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQ-SCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQG 101 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~-g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g 101 (114)
+.+|+.++++. ++++++++||++ +++|...++++|+++++++|++||+++|+|||++||||+|. +|++++++
T Consensus 198 ~~le~~l~~~~------~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~-~~a~~~~~ 270 (448)
T 3dod_A 198 RELAQLLEEHH------EEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGK-MFACEHEN 270 (448)
T ss_dssp HHHHHHHHHHG------GGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSGGGGGT
T ss_pred HHHHHHHHhCC------CCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccc-hhhhhhcC
Confidence 45777887542 689999999998 99999999999999999999999999999999999999998 88999999
Q ss_pred CCCCcCEEEeecC
Q psy1628 102 DDIIPDIVTVVWN 114 (114)
Q Consensus 102 ~~v~PDivt~gK~ 114 (114)
+.||++|+||+
T Consensus 271 --~~~di~t~sK~ 281 (448)
T 3dod_A 271 --VQPDLMAAGKG 281 (448)
T ss_dssp --CCCSEEEECGG
T ss_pred --CCCCEEEeccc
Confidence 99999999995
No 11
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.81 E-value=8.5e-20 Score=146.93 Aligned_cols=72 Identities=33% Similarity=0.528 Sum_probs=69.9
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~gK~ 114 (114)
++++++++||+++++|++.++++|+++|+++|++||+++|+|||++||||+|. +|++++++ +.||++|+||+
T Consensus 226 ~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~-~~~~~~~~--~~pdi~t~sK~ 297 (451)
T 3oks_A 226 DNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGA-MFACEHEG--IDPDLIVTAKG 297 (451)
T ss_dssp GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSGGGGGT--CCCSEEEECGG
T ss_pred CCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCcccc-chhhhhcC--CCCCeeeehhh
Confidence 68999999999999999999999999999999999999999999999999998 89999999 99999999995
No 12
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.80 E-value=1.7e-19 Score=143.94 Aligned_cols=84 Identities=27% Similarity=0.511 Sum_probs=75.7
Q ss_pred HHHHHHHHHhcCCCCCCCCceEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhc
Q psy1628 22 HLFFERIFLSASLYPFLFLYPCAFFAESL-QSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQ 100 (114)
Q Consensus 22 ~~~~e~~~~~~~~~~~~~~~iAAviiEPv-~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~ 100 (114)
.+.+|+.+++. ++ ++++++++||. ++ +|...++++|+++|+++|++||+++|+|||++||||+|. +|+++++
T Consensus 201 ~~~le~~l~~~--~~---~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~-~~~~~~~ 273 (452)
T 3n5m_A 201 VKEVDRVMTWE--LS---ETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGK-AFGFMNY 273 (452)
T ss_dssp HHHHHHHHHHH--CG---GGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGT
T ss_pred HHHHHHHHHhc--CC---CCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccc-cchhhhc
Confidence 45677777632 12 68999999999 89 999999999999999999999999999999999999998 8899999
Q ss_pred CCCCCcCEEEeecC
Q psy1628 101 GDDIIPDIVTVVWN 114 (114)
Q Consensus 101 g~~v~PDivt~gK~ 114 (114)
+ +.||++|+||+
T Consensus 274 ~--~~~di~t~sK~ 285 (452)
T 3n5m_A 274 D--VKPDIITMAKG 285 (452)
T ss_dssp T--CCCSEEEECGG
T ss_pred C--CCCCEEeeccc
Confidence 9 99999999995
No 13
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.80 E-value=1.2e-19 Score=146.36 Aligned_cols=72 Identities=39% Similarity=0.664 Sum_probs=69.9
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~gK~ 114 (114)
++++++|+||+++++|+++++++|+++|+++|++||+++|+|||++||||+|. +|++++++ +.||++|+||+
T Consensus 224 ~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~-~~a~~~~~--~~pdi~t~sK~ 295 (453)
T 4ffc_A 224 QSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGA-WFASEHEG--IVPDIVTMAKG 295 (453)
T ss_dssp GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSTHHHHT--CCCSEEEECGG
T ss_pred CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccc-cchhhhcC--CCcchHhhhhh
Confidence 68999999999999999999999999999999999999999999999999998 89999999 99999999995
No 14
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.79 E-value=2e-19 Score=146.44 Aligned_cols=87 Identities=24% Similarity=0.350 Sum_probs=75.9
Q ss_pred HHHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcC
Q psy1628 22 HLFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQG 101 (114)
Q Consensus 22 ~~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g 101 (114)
.+.+++.++++.... .+++++++||+++++|.++++++|+++|+++|++||+++|+||||+||||+|. +|+++++|
T Consensus 242 ~~~l~~~l~~~~~~~---~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~-~~~~~~~g 317 (472)
T 1ohv_A 242 LEEVEDLIVKYRKKK---KTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGK-FWAHEHWG 317 (472)
T ss_dssp HHHHHHHHHHHHHTT---CCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSGGGGGC
T ss_pred HHHHHHHHHhcCCCC---CCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCC-chhccccC
Confidence 346677776542000 28999999999999999999999999999999999999999999999999998 88999998
Q ss_pred CCCC--cCEEEeecC
Q psy1628 102 DDII--PDIVTVVWN 114 (114)
Q Consensus 102 ~~v~--PDivt~gK~ 114 (114)
+. ||++|+||+
T Consensus 318 --v~~~~Di~t~sK~ 330 (472)
T 1ohv_A 318 --LDDPADVMTFSKK 330 (472)
T ss_dssp --CSSCCSEEEECGG
T ss_pred --CCCCCCEEEEccc
Confidence 86 999999995
No 15
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.77 E-value=1.1e-18 Score=140.29 Aligned_cols=84 Identities=26% Similarity=0.336 Sum_probs=76.5
Q ss_pred HHHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcC
Q psy1628 22 HLFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQG 101 (114)
Q Consensus 22 ~~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g 101 (114)
.+.+++.++++. ++++++++||+++.+|...++++|+++++++|++||+++|+||||+||||+|. +|++++++
T Consensus 218 ~~~le~~i~~~~------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~-~~~~~~~~ 290 (449)
T 2cjg_A 218 LRQARAAFETRP------HDIACFVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGT-AWAYQQLD 290 (449)
T ss_dssp HHHHHHHHHHST------TTEEEEEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSTHHHHT
T ss_pred HHHHHHHHHhcC------CceEEEEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCc-ceeecccC
Confidence 345788887642 68999999999999999999999999999999999999999999999999998 88889999
Q ss_pred CCCCcCEEEeecC
Q psy1628 102 DDIIPDIVTVVWN 114 (114)
Q Consensus 102 ~~v~PDivt~gK~ 114 (114)
+.||++|+||+
T Consensus 291 --~~~di~t~sK~ 301 (449)
T 2cjg_A 291 --VAPDIVAFGKK 301 (449)
T ss_dssp --CCCSEEEECGG
T ss_pred --CCceEEEecCc
Confidence 99999999995
No 16
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.76 E-value=1.4e-18 Score=137.44 Aligned_cols=82 Identities=23% Similarity=0.251 Sum_probs=75.7
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
+.+++.++++. ++++++++||.++++|.+.++++|+++|+++|++||+++|+|||++|| |+|. ++++++++
T Consensus 190 ~~le~~l~~~~------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~-~~~~~~~~- 260 (434)
T 3l44_A 190 ETLKEALDKWG------HEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMY-GGAQDLLG- 260 (434)
T ss_dssp HHHHHHHHHHG------GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSS-SCHHHHHT-
T ss_pred HHHHHHHHhCC------CCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccc-cHHHHHcC-
Confidence 46777887752 689999999999999999999999999999999999999999999999 9998 88899999
Q ss_pred CCCcCEEEeecC
Q psy1628 103 DIIPDIVTVVWN 114 (114)
Q Consensus 103 ~v~PDivt~gK~ 114 (114)
+.||++|+||+
T Consensus 261 -~~~di~t~sK~ 271 (434)
T 3l44_A 261 -VTPDLTALGKV 271 (434)
T ss_dssp -CCCSEEEEEGG
T ss_pred -CCCCeeehhhh
Confidence 99999999995
No 17
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.76 E-value=2.3e-18 Score=136.34 Aligned_cols=82 Identities=21% Similarity=0.210 Sum_probs=75.9
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
+.+++.++++. ++++++++||+++++|.+.++++|+++++++|++||+++|+||+++|| |+|. ++++++++
T Consensus 188 ~~le~~l~~~~------~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~-~~~~~~~~- 258 (429)
T 4e77_A 188 ASVRQAFEQYP------QEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVAL-AGAQDYYH- 258 (429)
T ss_dssp HHHHHHHHHST------TTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBT-TCHHHHTT-
T ss_pred HHHHHHHHhcC------CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCc-chHHHhcC-
Confidence 46788887752 689999999999999999999999999999999999999999999999 9998 88899999
Q ss_pred CCCcCEEEeecC
Q psy1628 103 DIIPDIVTVVWN 114 (114)
Q Consensus 103 ~v~PDivt~gK~ 114 (114)
+.||++|+||+
T Consensus 259 -~~pdi~t~sK~ 269 (429)
T 4e77_A 259 -VIPDLTCLGKI 269 (429)
T ss_dssp -CCCSEEEEEGG
T ss_pred -CCCCeeeeccc
Confidence 99999999995
No 18
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.75 E-value=2.5e-18 Score=137.69 Aligned_cols=72 Identities=35% Similarity=0.578 Sum_probs=68.8
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~gK~ 114 (114)
++++++++||+++++|.+.++++++++++++|++||+++|+||+++||||+|. +|++++++ +.||++|+||+
T Consensus 211 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~-~~~~~~~~--~~~di~t~sK~ 282 (433)
T 1z7d_A 211 PNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGK-LLCVHHYN--VKPDVILLGKA 282 (433)
T ss_dssp TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSGGGGGT--CCCSEEEECGG
T ss_pred CCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCc-chhhHhcC--CCCCEEEECcc
Confidence 57999999999999999999999999999999999999999999999999998 88889999 99999999995
No 19
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.75 E-value=3e-18 Score=137.67 Aligned_cols=72 Identities=31% Similarity=0.512 Sum_probs=68.8
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~gK~ 114 (114)
++++++++||+++.+|...++++++++++++|++||+++|+||+++||||+|. +|++++++ +.||++++||+
T Consensus 222 ~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~-~~~~~~~~--~~~Di~t~sK~ 293 (439)
T 2oat_A 222 PNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGR-WLAVDYEN--VRPDIVLLGKA 293 (439)
T ss_dssp TTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSGGGGGT--CCCSEEEECGG
T ss_pred CCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCc-chhHHHhC--CCCcEEEeccc
Confidence 57999999999999999999999999999999999999999999999999998 88889999 99999999995
No 20
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.75 E-value=4e-18 Score=135.18 Aligned_cols=82 Identities=20% Similarity=0.233 Sum_probs=75.7
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
+.+|+.++++. ++++++++||.++++|.+.++++|+++++++|++||+++|+||+++|| |+|. ++++++++
T Consensus 188 ~~le~~l~~~~------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~-~~~~~~~~- 258 (429)
T 3k28_A 188 ESVKYAFEQFG------DDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAY-NCGQGYYG- 258 (429)
T ss_dssp HHHHHHHHHHG------GGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSST-THHHHHHT-
T ss_pred HHHHHHHHhCC------CCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCc-chHHHHhC-
Confidence 46777787652 689999999999999999999999999999999999999999999999 9998 88899999
Q ss_pred CCCcCEEEeecC
Q psy1628 103 DIIPDIVTVVWN 114 (114)
Q Consensus 103 ~v~PDivt~gK~ 114 (114)
+.||++|+||+
T Consensus 259 -~~~di~t~sK~ 269 (429)
T 3k28_A 259 -VTPDLTCLGKV 269 (429)
T ss_dssp -CCCSEEEECGG
T ss_pred -CCCceehhhhh
Confidence 99999999995
No 21
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.74 E-value=3.7e-18 Score=134.86 Aligned_cols=84 Identities=27% Similarity=0.379 Sum_probs=76.7
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCC-CCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhc-
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQS-CGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQ- 100 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g-~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~- 100 (114)
+.+|+.++++ ++ ++++++++||.++ ++|...++++|+++++++|++||+++|+|||++||+|+|. +++++++
T Consensus 177 ~~le~~l~~~--~~---~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~-~~~~~~~~ 250 (430)
T 3i4j_A 177 EGLRALLERE--GP---ETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGS-PLALSRWS 250 (430)
T ss_dssp THHHHHHHHH--CG---GGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGTT
T ss_pred HHHHHHHHhc--CC---CCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccc-hhhhhhhc
Confidence 5677777764 23 6899999999999 9999999999999999999999999999999999999998 8899999
Q ss_pred CCCCCcCEEEeecC
Q psy1628 101 GDDIIPDIVTVVWN 114 (114)
Q Consensus 101 g~~v~PDivt~gK~ 114 (114)
+ +.||++|+||+
T Consensus 251 ~--~~~di~t~sK~ 262 (430)
T 3i4j_A 251 G--VTPDIAVLGKG 262 (430)
T ss_dssp T--CCCSEEEECGG
T ss_pred C--CCCcEEEEccc
Confidence 8 99999999995
No 22
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.73 E-value=9.7e-18 Score=132.89 Aligned_cols=82 Identities=26% Similarity=0.305 Sum_probs=74.2
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
+.+++.++++. ++++++++||+++++|...++++|+++++++|++||+++|+||+++|| |+|. ++++++++
T Consensus 191 ~~le~~l~~~~------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~- 261 (434)
T 2epj_A 191 EALERVFAEYG------DRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGL-EGAQGYFN- 261 (434)
T ss_dssp HHHHHHHHHHG------GGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSST-THHHHHHT-
T ss_pred HHHHHHHHhCC------CCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCc-chhhHHhC-
Confidence 45777777642 589999999999989999999999999999999999999999999999 8997 88888999
Q ss_pred CCCcCEEEeecC
Q psy1628 103 DIIPDIVTVVWN 114 (114)
Q Consensus 103 ~v~PDivt~gK~ 114 (114)
+.||++++||+
T Consensus 262 -~~~di~s~sK~ 272 (434)
T 2epj_A 262 -IEGDIIVLGKI 272 (434)
T ss_dssp -CCCSEEEEEGG
T ss_pred -CCCCeeeecch
Confidence 99999999995
No 23
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.72 E-value=1.6e-17 Score=131.19 Aligned_cols=82 Identities=22% Similarity=0.257 Sum_probs=75.7
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
+.+++.++++. ++++++++||.++++|...++++|+++++++|++||+++|+||+++|| |+|. +++.++++
T Consensus 187 ~~le~~l~~~~------~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~-~~~~~~~~- 257 (427)
T 3fq8_A 187 EAVKALFAENP------GEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAY-GGVQEKFG- 257 (427)
T ss_dssp HHHHHHHHHST------TTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBT-THHHHHTT-
T ss_pred HHHHHHHHhCC------CCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCc-chhhHhcC-
Confidence 46778887752 689999999999999999999999999999999999999999999999 9998 88889999
Q ss_pred CCCcCEEEeecC
Q psy1628 103 DIIPDIVTVVWN 114 (114)
Q Consensus 103 ~v~PDivt~gK~ 114 (114)
+.||++++||+
T Consensus 258 -~~~di~t~sK~ 268 (427)
T 3fq8_A 258 -VTPDLTTLGKI 268 (427)
T ss_dssp -CCCSEEEECGG
T ss_pred -CCCChhhhhhh
Confidence 99999999995
No 24
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.71 E-value=3.1e-17 Score=130.46 Aligned_cols=85 Identities=25% Similarity=0.394 Sum_probs=75.7
Q ss_pred HHHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcC
Q psy1628 22 HLFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQG 101 (114)
Q Consensus 22 ~~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g 101 (114)
-+.+|+.++++ ++ ++++++++||++++.|...++++|+++++++|++||+++|+||+++||||+|. +++++.++
T Consensus 205 ~~~le~~l~~~--~~---~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~-~~~~~~~~ 278 (449)
T 3a8u_X 205 ADELLKLIELH--DA---SNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGS-MFGADSFG 278 (449)
T ss_dssp HHHHHHHHHHH--CG---GGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSHHHHHT
T ss_pred HHHHHHHHHhc--CC---CCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCc-chhhhhcC
Confidence 45677777654 22 58999999999988999999999999999999999999999999999999997 78889998
Q ss_pred CCCCcCEEEeecC
Q psy1628 102 DDIIPDIVTVVWN 114 (114)
Q Consensus 102 ~~v~PDivt~gK~ 114 (114)
+.||++++||+
T Consensus 279 --~~~di~s~sK~ 289 (449)
T 3a8u_X 279 --VTPDLMCIAKQ 289 (449)
T ss_dssp --CCCSEEEECGG
T ss_pred --CCCCEEEEccc
Confidence 99999999995
No 25
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.71 E-value=3.8e-17 Score=129.39 Aligned_cols=85 Identities=33% Similarity=0.506 Sum_probs=75.8
Q ss_pred HHHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcC
Q psy1628 22 HLFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQG 101 (114)
Q Consensus 22 ~~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g 101 (114)
.+.+|+.+++. .+ ++++++++||.++++|.+.++++|+++|+++|++||+++|+||+++||||+|. ++++++++
T Consensus 187 ~~~le~~l~~~--~~---~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~-~~~~~~~~ 260 (439)
T 3dxv_A 187 LTLLTEKLAAV--PA---GSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGR-LHCFEHEG 260 (439)
T ss_dssp HHHHHHHHHTS--CT---TCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSS-SSGGGGTT
T ss_pred HHHHHHHHHhc--CC---CCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCch-hhHHHhcC
Confidence 35667777422 23 68999999999999999999999999999999999999999999999999998 88889998
Q ss_pred CCCCcCEEEeecC
Q psy1628 102 DDIIPDIVTVVWN 114 (114)
Q Consensus 102 ~~v~PDivt~gK~ 114 (114)
+.||++++||+
T Consensus 261 --~~~di~s~sK~ 271 (439)
T 3dxv_A 261 --FVPDILVLGKG 271 (439)
T ss_dssp --CCCSEEEECGG
T ss_pred --CCCCEEEEcch
Confidence 99999999995
No 26
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.69 E-value=4.7e-17 Score=128.39 Aligned_cols=84 Identities=32% Similarity=0.457 Sum_probs=74.9
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
+.+++.++++ ++ ++++++++||.++..|...++++|+++++++|++||+++|+|||++||||+|. +++++.++
T Consensus 190 ~~le~~l~~~--~~---~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~-~~~~~~~~- 262 (433)
T 1zod_A 190 DYAFDLIDRQ--SS---GNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGT-MFACQRDG- 262 (433)
T ss_dssp HHHHHHHHHH--CC---SCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSTHHHHT-
T ss_pred HHHHHHHHhc--CC---CCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCch-HhHHhhcC-
Confidence 4567777654 22 58999999999888899999999999999999999999999999999999998 78888888
Q ss_pred CCCcCEEEeecC
Q psy1628 103 DIIPDIVTVVWN 114 (114)
Q Consensus 103 ~v~PDivt~gK~ 114 (114)
+.||++++||+
T Consensus 263 -~~~di~s~sK~ 273 (433)
T 1zod_A 263 -VTPDILTLSKT 273 (433)
T ss_dssp -CCCSEEEECHH
T ss_pred -CCCCEEEeccc
Confidence 99999999994
No 27
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.68 E-value=4.3e-17 Score=130.06 Aligned_cols=82 Identities=28% Similarity=0.329 Sum_probs=73.6
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
+.+|+.++++. ++++++++||+++++|...++++|+++|+++|++||+++|+||+++|| |+|. ++++++++
T Consensus 189 ~~le~~l~~~~------~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~- 259 (453)
T 2cy8_A 189 EGMREVFANHG------SDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGN-HGMQALLD- 259 (453)
T ss_dssp HHHHHHHHHHG------GGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCT-THHHHHHT-
T ss_pred HHHHHHHHhcC------CCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCc-hhhhHHhC-
Confidence 45677777642 589999999998888999999999999999999999999999999999 9997 88888899
Q ss_pred CCCcCEEEeecC
Q psy1628 103 DIIPDIVTVVWN 114 (114)
Q Consensus 103 ~v~PDivt~gK~ 114 (114)
+.||++++||+
T Consensus 260 -~~~di~s~sK~ 270 (453)
T 2cy8_A 260 -VQPDLTCLAKA 270 (453)
T ss_dssp -CCCSEEEEEGG
T ss_pred -CCCcEEEEChh
Confidence 99999999995
No 28
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.68 E-value=8.9e-17 Score=126.99 Aligned_cols=81 Identities=26% Similarity=0.355 Sum_probs=73.0
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
+.+++.++++. ++++++++||+++++|...++++|+++++++ ++||+++|+||+++|| |+|. ++++++++
T Consensus 187 ~~le~~l~~~~------~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~-~~~~~~~~- 256 (424)
T 2e7u_A 187 EGLREVLKRRG------EEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAF-GGATELLG- 256 (424)
T ss_dssp HHHHHHHHHHG------GGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSST-THHHHHHT-
T ss_pred HHHHHHHHhCC------CCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccch-hHHHHHhC-
Confidence 45777776642 5899999999999899999999999999999 9999999999999999 8997 78888999
Q ss_pred CCCcCEEEeecC
Q psy1628 103 DIIPDIVTVVWN 114 (114)
Q Consensus 103 ~v~PDivt~gK~ 114 (114)
+.||++++||+
T Consensus 257 -~~~di~s~sK~ 267 (424)
T 2e7u_A 257 -LKPDLVTLGKI 267 (424)
T ss_dssp -CCCSEEEECGG
T ss_pred -CCcchhhhhhh
Confidence 99999999995
No 29
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.67 E-value=1.2e-16 Score=124.53 Aligned_cols=72 Identities=31% Similarity=0.508 Sum_probs=69.1
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~gK~ 114 (114)
++++++++||.++++|...++++|+++++++|++||+++|+||+++||||+|. ++++++++ +.||++|+||+
T Consensus 178 ~~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~-~~~~~~~~--~~~d~~t~sK~ 249 (395)
T 3nx3_A 178 EKTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGK-FFAYEHAQ--ILPDIMTSAKA 249 (395)
T ss_dssp TTEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGGT--CCCSEEEECGG
T ss_pred CCeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCc-chhHHhcC--CCCCEEEeccc
Confidence 58999999999999999999999999999999999999999999999999998 88899999 99999999995
No 30
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.66 E-value=1.8e-16 Score=126.06 Aligned_cols=72 Identities=31% Similarity=0.493 Sum_probs=68.2
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~gK~ 114 (114)
++++++++||.++.+|+++++++++++++++|++||+++|+||+++||+|+|. +++++.++ +.||+++++|+
T Consensus 200 ~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~-~~~~~~~~--~~~diit~sK~ 271 (420)
T 2pb2_A 200 DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGD-LFAYMHYG--VTPDILTSAKA 271 (420)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSHHHHHT--CCCSEEEECGG
T ss_pred cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCc-HHHHHhcC--CCCCeEEeccc
Confidence 58999999999999999999999999999999999999999999999999998 88888888 99999999995
No 31
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.65 E-value=4.6e-16 Score=122.85 Aligned_cols=83 Identities=28% Similarity=0.440 Sum_probs=73.9
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESL-QSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQG 101 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv-~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g 101 (114)
+.+++.++++. ++++++++||. ++..|...++++|+++++++|++||+++|+||+++||||+|. +++++.++
T Consensus 192 ~~l~~~l~~~~------~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~-~~~~~~~~ 264 (429)
T 1s0a_A 192 VGFARLMAAHR------HEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGK-LFACEHAE 264 (429)
T ss_dssp HHHHHHHHHHT------TTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGGT
T ss_pred HHHHHHHHhCC------CCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccch-HHHhhhcC
Confidence 45666676542 58999999999 988999999999999999999999999999999999999997 77888888
Q ss_pred CCCCcCEEEeecC
Q psy1628 102 DDIIPDIVTVVWN 114 (114)
Q Consensus 102 ~~v~PDivt~gK~ 114 (114)
+.||++++||+
T Consensus 265 --~~~d~~t~sK~ 275 (429)
T 1s0a_A 265 --IAPDILCLGKA 275 (429)
T ss_dssp --CCCSEEEECGG
T ss_pred --CCCCEEEeccc
Confidence 99999999995
No 32
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.65 E-value=5.2e-16 Score=122.90 Aligned_cols=85 Identities=35% Similarity=0.591 Sum_probs=74.2
Q ss_pred HHHH-HHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcC
Q psy1628 23 LFFE-RIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQG 101 (114)
Q Consensus 23 ~~~e-~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g 101 (114)
+.++ +.++++. ++ ++++++++||.++..|...++++|+++++++|++||+++|+||+++||||+|. +++.+.++
T Consensus 197 ~~l~~~~i~~~~-~~---~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~-~~~~~~~~ 271 (419)
T 2eo5_A 197 EFIEDYIFVNLV-PP---EEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGK-LFAIENFN 271 (419)
T ss_dssp HHHHHTHHHHTC-CG---GGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGGT
T ss_pred HHHHHHHHhhcc-CC---CCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcc-hhhHHhcC
Confidence 4666 6666531 22 47899999999888899999999999999999999999999999999999997 77888888
Q ss_pred CCCCcCEEEeecC
Q psy1628 102 DDIIPDIVTVVWN 114 (114)
Q Consensus 102 ~~v~PDivt~gK~ 114 (114)
+.||++++||+
T Consensus 272 --~~~d~~t~sK~ 282 (419)
T 2eo5_A 272 --TVPDVITLAKA 282 (419)
T ss_dssp --CCCSEEEECGG
T ss_pred --CCCCEEEeccc
Confidence 99999999995
No 33
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.45 E-value=1.2e-17 Score=137.82 Aligned_cols=99 Identities=16% Similarity=0.123 Sum_probs=82.3
Q ss_pred cccccchhHHHHHHH----------------HHHHHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHH
Q psy1628 5 VLTECIIGRYIILLA----------------VVHLFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVY 68 (114)
Q Consensus 5 ~~~~~~~~~~~~~~~----------------~~~~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr 68 (114)
.+..|++|++...++ .-.+.+++.++++ + ++++++++||+++++|+.+++++|+++|+
T Consensus 187 ~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~~d~~~l~~~l~~~---~---~~~aavi~epv~~~~G~~~~~~~~l~~l~ 260 (465)
T 2yky_A 187 AFDGGYHGGLLNFASGHAPTNAPYHVVLGVYNDVEGTADLLKRH---G---HDCAAILVEPMLGAGGCVPAERAFLDLLR 260 (465)
Confidence 456778887765441 0123455666543 2 68999999999999999999999999999
Q ss_pred HHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEeecC
Q psy1628 69 KHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 69 ~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~gK~ 114 (114)
++|++||+++|+|||++ | |+|. +|+++++| +.||++|+||+
T Consensus 261 ~l~~~~g~llI~DEv~~-~-r~g~-~~a~~~~g--v~pDi~t~sK~ 301 (465)
T 2yky_A 261 AEASRCGALLIFDEVMT-S-RLSG-GGAQEMLG--ISADLTTLGKY 301 (465)
Confidence 99999999999999999 7 9998 88999999 99999999995
No 34
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.57 E-value=1.4e-14 Score=113.30 Aligned_cols=85 Identities=29% Similarity=0.437 Sum_probs=73.3
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
+.+++.+++.. .+ .++++++++|.+++.|...++++++++++++|++||+++|+||+++||+++|. +++++.++
T Consensus 185 ~~l~~~l~~~~-~~---~~~~~v~~~p~~~ntG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~-~~~~~~~~- 258 (426)
T 1sff_A 185 ASIHRIFKNDA-AP---EDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGT-LFAMEQMG- 258 (426)
T ss_dssp HHHHHHHHHTC-CG---GGEEEEEECSBCTTTTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGTT-
T ss_pred HHHHHHHHhcc-CC---CceEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccc-hhhhhhcC-
Confidence 45666665421 12 58899999999988898999999999999999999999999999999999997 77778888
Q ss_pred CCCcCEEEeecC
Q psy1628 103 DIIPDIVTVVWN 114 (114)
Q Consensus 103 ~v~PDivt~gK~ 114 (114)
+.||++++||+
T Consensus 259 -~~~di~s~sK~ 269 (426)
T 1sff_A 259 -VAPDLTTFAKS 269 (426)
T ss_dssp -SCCSEEEECGG
T ss_pred -CCCCEEEEccc
Confidence 89999999994
No 35
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.52 E-value=2.9e-14 Score=110.62 Aligned_cols=72 Identities=32% Similarity=0.526 Sum_probs=68.2
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~gK~ 114 (114)
.++++++++|.++..|...++++|+++++++|++||+++|+||+++||+++|. +++.+.++ +.||++++||+
T Consensus 181 ~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~-~~~~~~~~--~~~d~~~~SK~ 252 (392)
T 3ruy_A 181 PNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGK-VFACDWDN--VTPDMYILGKA 252 (392)
T ss_dssp TTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSS-SSGGGGGT--CCCSEEEECGG
T ss_pred cCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcccc-chhhhccC--CCCCEEEEchh
Confidence 58999999999999999999999999999999999999999999999999998 88888888 99999999995
No 36
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.51 E-value=3.6e-14 Score=110.08 Aligned_cols=72 Identities=28% Similarity=0.503 Sum_probs=68.2
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~gK~ 114 (114)
.++++++++|..+.||+.+++.++++++.++|++||+++|+||+++||+++|. .++.+.++ +.||+++++|+
T Consensus 182 ~~~~~v~~~p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~-~~~~~~~~--~~~d~~t~sK~ 253 (406)
T 4adb_A 182 DSTCAVIVEPIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGE-LYAYMHYG--VTPDLLTTAKA 253 (406)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSS-SSHHHHHT--CCCSEEEECGG
T ss_pred CCeEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccch-hHHHHhcC--CCCCEEEechh
Confidence 58999999999999999999999999999999999999999999999999998 78888888 99999999995
No 37
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.39 E-value=9.8e-13 Score=102.34 Aligned_cols=72 Identities=33% Similarity=0.544 Sum_probs=66.1
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~gK~ 114 (114)
+++++++++|.++..|.+.++.++++++.++|++||+++|+||+++||+++|. .++.+.++ +.||+++++|+
T Consensus 182 ~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~-~~~~~~~~--~~~d~~s~sK~ 253 (397)
T 2ord_A 182 EDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGK-LFAYQKYG--VVPDVLTTAKG 253 (397)
T ss_dssp TTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSHHHHHT--CCCSEEEECGG
T ss_pred cCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCcc-chhhhhhC--CCCCeeeeccc
Confidence 57999999998888898789999999999999999999999999999999997 67777888 88999999995
No 38
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.38 E-value=1.2e-12 Score=101.57 Aligned_cols=72 Identities=32% Similarity=0.530 Sum_probs=65.9
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~gK~ 114 (114)
.++++++++|.++..|...+++++++++.++|++||+++|+||+++||+++|. .+..+.++ +.||+++++|+
T Consensus 184 ~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~-~~~~~~~~--~~~d~~s~sK~ 255 (395)
T 1vef_A 184 EETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGK-RFAFEHFG--IVPDILTLAKA 255 (395)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSTHHHHT--CCCSEEEECGG
T ss_pred cCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCc-hhHhhhcC--CCCCEEEEccc
Confidence 47899999999888898999999999999999999999999999999999997 66777788 88999999994
No 39
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.33 E-value=4.1e-12 Score=97.47 Aligned_cols=72 Identities=24% Similarity=0.439 Sum_probs=65.7
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~gK~ 114 (114)
.++++++++|.++..|...+++++++++.++|++||+++|.||+++||++++. .+..+.++ ..||++++||.
T Consensus 171 ~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~--~~~d~~s~SK~ 242 (375)
T 2eh6_A 171 EETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGE-FYAYQHFN--LKPDVIALAKG 242 (375)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSS-SSGGGGGT--CCCSEEEECGG
T ss_pred CCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCc-chhhhhcC--CCCCEEEEccc
Confidence 57899999998888899999999999999999999999999999999999986 56677777 88999999994
No 40
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.17 E-value=6.7e-11 Score=93.15 Aligned_cols=81 Identities=12% Similarity=0.133 Sum_probs=62.5
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhh---
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQL--- 99 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~--- 99 (114)
+.+++.+.+ .+++++++++.++..| ..++++++++++++|++||+++|+||++++|+++|.....+..
T Consensus 184 ~~le~~i~~--------~~~~~vil~~p~nptG-~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 254 (421)
T 3l8a_A 184 EQLEKDIID--------NNVKIYLLCSPHNPGG-RVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDA 254 (421)
T ss_dssp HHHHHHHHH--------TTEEEEEEESSBTTTT-BCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCT
T ss_pred HHHHHHhhc--------cCCeEEEECCCCCCCC-CcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCc
Confidence 456666654 4789999999998888 6677788999999999999999999999999998852222222
Q ss_pred --cCCCCCcCEEEeecC
Q psy1628 100 --QGDDIIPDIVTVVWN 114 (114)
Q Consensus 100 --~g~~v~PDivt~gK~ 114 (114)
.+ ..+++.+++|+
T Consensus 255 ~~~~--~~i~~~s~sK~ 269 (421)
T 3l8a_A 255 SYKD--FTIILSSATKT 269 (421)
T ss_dssp TGGG--TEEEEECSHHH
T ss_pred hhcC--cEEEEEeChhh
Confidence 23 55778888883
No 41
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=98.98 E-value=1.2e-09 Score=85.24 Aligned_cols=76 Identities=18% Similarity=0.183 Sum_probs=60.9
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccc--ccccCccchhhhhc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVG--FGRVGTHWWAFQLQ 100 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tG--fgRtG~~~~~~~~~ 100 (114)
+.+++.++++ +.+++++++.++..|...+ +++++++|++||+++|.||++++ +|++|. .+. +.+
T Consensus 176 ~~le~~l~~~--------~~~~vi~~~~~nptG~~~~----l~~l~~la~~~~~~li~De~~~~g~~g~~g~-~~~-~~~ 241 (409)
T 3kki_A 176 DHLRMLIQRH--------GPGIIVVDSIYSTLGTIAP----LAELVNISKEFGCALLVDESHSLGTHGPNGA-GLL-AEL 241 (409)
T ss_dssp HHHHHHHHHH--------CSCEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSGGGC-CHH-HHH
T ss_pred HHHHHHHHhc--------CCeEEEECCCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCccccccCCCCC-cch-hhc
Confidence 4567777663 3589999999988887666 99999999999999999999999 899987 444 556
Q ss_pred CCCC--CcCE--EEeecC
Q psy1628 101 GDDI--IPDI--VTVVWN 114 (114)
Q Consensus 101 g~~v--~PDi--vt~gK~ 114 (114)
+ + .||+ .+++|+
T Consensus 242 ~--~~~~~di~~~s~sK~ 257 (409)
T 3kki_A 242 G--LTREVHFMTASLAKT 257 (409)
T ss_dssp T--CGGGCSEEEEESSST
T ss_pred C--CCCCCCEEEeecchh
Confidence 6 5 5788 666774
No 42
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=98.94 E-value=2.6e-09 Score=84.56 Aligned_cols=79 Identities=19% Similarity=0.179 Sum_probs=62.6
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccc--cccCccchhhhhc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGF--GRVGTHWWAFQLQ 100 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGf--gRtG~~~~~~~~~ 100 (114)
+.+++.++++. + ++++++++||.++..|...+ +++|+++|++||+++|+||+++++ +++|. . ..+.+
T Consensus 181 ~~le~~l~~~~--~---~~~~~v~~~~~~n~tG~~~~----l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~-~-~~~~~ 249 (427)
T 2w8t_A 181 EDLDKRLGRLP--K---EPAKLVVLEGVYSMLGDIAP----LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGR-G-VYEAQ 249 (427)
T ss_dssp HHHHHHHHTSC--S---SSCEEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTTSSTTSC-C-HHHHT
T ss_pred HHHHHHHHhcc--C---CCCeEEEEcCCCCCCCCccC----HHHHHHHHHHcCCEEEEECCccccccCCCCC-c-hHhhc
Confidence 45777777642 1 38999999999987887765 899999999999999999999985 55665 3 45667
Q ss_pred CCCCCcC----EEEeecC
Q psy1628 101 GDDIIPD----IVTVVWN 114 (114)
Q Consensus 101 g~~v~PD----ivt~gK~ 114 (114)
+ +.|| +.+++|.
T Consensus 250 ~--~~~~~di~~~s~sK~ 265 (427)
T 2w8t_A 250 G--LEGQIDFVVGTFSKS 265 (427)
T ss_dssp T--CTTCCSEEEEESSST
T ss_pred C--CCcCCcEEEecchhh
Confidence 7 7888 7888884
No 43
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=98.75 E-value=1.8e-08 Score=77.35 Aligned_cols=80 Identities=20% Similarity=0.190 Sum_probs=61.7
Q ss_pred HHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccc-ccc-cccCccchhhhhcC
Q psy1628 24 FFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQ-VGF-GRVGTHWWAFQLQG 101 (114)
Q Consensus 24 ~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~-tGf-gRtG~~~~~~~~~g 101 (114)
.+++.++++...+ .+++++++++.++..|...+ ++++.++|++||+++|.||++ .|+ +++|. +..+.++
T Consensus 161 ~l~~~l~~~~~~~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~ 231 (399)
T 3tqx_A 161 DLEAKLKEADEKG---ARFKLIATDGVFSMDGIIAD----LKSICDLADKYNALVMVDDSHAVGFIGENGR--GTPEYCG 231 (399)
T ss_dssp HHHHHHHHHHTTT---CSSEEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTTSSTTSC--CHHHHHT
T ss_pred HHHHHHHhhhccC---CCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCCEEEEECCccccccCCCCC--chHHhhC
Confidence 5666666542011 38999999999888887766 899999999999999999999 676 66765 3456666
Q ss_pred CCC--CcCEE--EeecC
Q psy1628 102 DDI--IPDIV--TVVWN 114 (114)
Q Consensus 102 ~~v--~PDiv--t~gK~ 114 (114)
+ .||++ +++|+
T Consensus 232 --~~~~~di~~~s~sK~ 246 (399)
T 3tqx_A 232 --VADRVDILTGTLGKA 246 (399)
T ss_dssp --CTTCCSEEEEESSSS
T ss_pred --CCCCCcEEEecchHh
Confidence 6 88999 77774
No 44
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=98.67 E-value=4e-08 Score=75.33 Aligned_cols=71 Identities=13% Similarity=0.105 Sum_probs=57.5
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~gK~ 114 (114)
.++.++++++.++..|. ..++++++++.++|++||+++|.||++++|++.+. ....+.++ ..+++.+++|+
T Consensus 153 ~~~~~v~~~~~~nptG~-~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~-~~~~~~~~--~~i~~~s~sK~ 223 (375)
T 3op7_A 153 PTTKMICINNANNPTGA-VMDRTYLEELVEIASEVGAYILSDEVYRSFSELDV-PSIIEVYD--KGIAVNSLSKT 223 (375)
T ss_dssp TTCCEEEEESSCTTTCC-CCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCC-CCHHHHCT--TEEEEEESSSS
T ss_pred cCCeEEEEcCCCCCCCC-CCCHHHHHHHHHHHHHcCCEEEEEcccccccccCC-CchhhhcC--CEEEEeEChhh
Confidence 46788999987776675 45788899999999999999999999999987743 33445566 77888899985
No 45
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=98.66 E-value=1.1e-07 Score=73.06 Aligned_cols=78 Identities=22% Similarity=0.279 Sum_probs=59.6
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc-cc-cccCccchhhhhc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV-GF-GRVGTHWWAFQLQ 100 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-Gf-gRtG~~~~~~~~~ 100 (114)
+.+++.+++.. .+.+++++++.++..|...+ ++++.++|++||+++|.||++. |+ +++|. .+. +.+
T Consensus 156 ~~l~~~l~~~~------~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~~~~~~~~-~~~-~~~ 223 (384)
T 1bs0_A 156 THLARLLASPC------PGQQMVVTEGVFSMDGDSAP----LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGR-GSC-WLQ 223 (384)
T ss_dssp HHHHHHHHSCC------SSCEEEEEESBCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTTTTTSSGGGC-CHH-HHT
T ss_pred HHHHHHHHhcC------CCCeEEEEeCCCCCCCCccC----HHHHHHHHHHcCcEEEEECCcccceecCCCC-chH-Hhc
Confidence 45677776531 34789999988887787765 7899999999999999999984 64 66776 333 556
Q ss_pred CCCCCcCEE--EeecC
Q psy1628 101 GDDIIPDIV--TVVWN 114 (114)
Q Consensus 101 g~~v~PDiv--t~gK~ 114 (114)
+ ..||++ +++|.
T Consensus 224 ~--~~~di~~~s~sK~ 237 (384)
T 1bs0_A 224 K--VKPELLVVTFGKG 237 (384)
T ss_dssp T--CCCSEEEEESSST
T ss_pred C--CCCcEEEeeccch
Confidence 6 779999 77774
No 46
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=98.65 E-value=6e-08 Score=74.23 Aligned_cols=72 Identities=4% Similarity=-0.143 Sum_probs=51.9
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcC----EEEeec
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPD----IVTVVW 113 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PD----ivt~gK 113 (114)
.++.+++++..++..|.. .+++.++++.++|++||+++|+||++++|.+.|........++ .-.|| +.+++|
T Consensus 159 ~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~-~~~~d~~i~~~s~sK 234 (391)
T 3dzz_A 159 PSVRMMVFCNPHNPIGYA-WSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVD-WDAKNWVVSLISPSK 234 (391)
T ss_dssp TTEEEEEEESSBTTTTBC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSC-TTTGGGEEEEECSHH
T ss_pred cCceEEEEECCCCCCCcc-cCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcC-ccccCcEEEEEeChh
Confidence 367777777666666754 4667799999999999999999999999988885233444433 01278 445566
No 47
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=98.64 E-value=6.6e-08 Score=76.12 Aligned_cols=52 Identities=17% Similarity=0.089 Sum_probs=44.2
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
.++.++++++.+...|. ..+.+.++++.++|++||+++|+||++++++++|.
T Consensus 190 ~~~~~v~i~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~ 241 (435)
T 3piu_A 190 LRVKGVLVTNPSNPLGT-TMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSP 241 (435)
T ss_dssp CCEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSS
T ss_pred CCeEEEEEcCCCCCCCC-CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCC
Confidence 47888888877666675 55677899999999999999999999999877776
No 48
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=98.60 E-value=2.4e-07 Score=71.74 Aligned_cols=79 Identities=25% Similarity=0.376 Sum_probs=58.8
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc-c-ccccCccchhhhhc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV-G-FGRVGTHWWAFQLQ 100 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-G-fgRtG~~~~~~~~~ 100 (114)
..+++.+++.. + ++++++++++.++..|...+ ++++.++|++||+++|+||+++ | ||++|. .+. ..+
T Consensus 165 ~~le~~l~~~~--~---~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~-~~~-~~~ 233 (401)
T 2bwn_A 165 AHLRELIAADD--P---AAPKLIAFESVYSMDGDFGP----IKEICDIAEEFGALTYIDEVHAVGMYGPRGA-GVA-ERD 233 (401)
T ss_dssp HHHHHHHHHSC--T---TSCEEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSTTSC-CHH-HHH
T ss_pred HHHHHHHHhhc--c---CCceEEEEecCcCCCCCcCC----HHHHHHHHHHcCCEEEEeccccccccCCCCc-eee-ecc
Confidence 45677776541 1 47889999999888787765 7999999999999999999999 3 577776 343 445
Q ss_pred CCCC--CcCEE--EeecC
Q psy1628 101 GDDI--IPDIV--TVVWN 114 (114)
Q Consensus 101 g~~v--~PDiv--t~gK~ 114 (114)
+ + .+|++ +++|+
T Consensus 234 ~--~~~~~~i~~~s~sK~ 249 (401)
T 2bwn_A 234 G--LMHRIDIFNGTLAKA 249 (401)
T ss_dssp T--CGGGCSEEEEESSST
T ss_pred C--ccccCcEEEeechhh
Confidence 5 4 34554 67774
No 49
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=98.59 E-value=8.9e-08 Score=73.99 Aligned_cols=81 Identities=20% Similarity=0.197 Sum_probs=58.9
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccc-ccc-cccCccchhhhhc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQ-VGF-GRVGTHWWAFQLQ 100 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~-tGf-gRtG~~~~~~~~~ 100 (114)
+.+++.+++..... .+++++++++.++..|...+ ++++.++|++||+++|+||++ +|+ +++|. .+ .+.+
T Consensus 162 ~~l~~~l~~~~~~~---~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~De~~~~g~~~~~g~-~~-~~~~ 232 (401)
T 1fc4_A 162 QELEARLKEAREAG---ARHVLIATDGVFSMDGVIAN----LKGVCDLADKYDALVMVDDSHAVGFVGENGR-GS-HEYC 232 (401)
T ss_dssp HHHHHHHHHHHHTT---CSSEEEEEESEETTTTEECC----HHHHHHHHHHTTEEEEEECTTTTTTSSTTSC-CH-HHHT
T ss_pred HHHHHHHHHhhccC---CCceEEEEeCCcCCCCCCCC----HHHHHHHHHHcCCEEEEECcccccccCCCCC-cc-HHHc
Confidence 45666665431000 27899999998887787765 899999999999999999999 598 46786 43 3445
Q ss_pred CCCCCc--CEE--EeecC
Q psy1628 101 GDDIIP--DIV--TVVWN 114 (114)
Q Consensus 101 g~~v~P--Div--t~gK~ 114 (114)
+ +.| |++ +++|.
T Consensus 233 ~--~~~~~di~~~s~sK~ 248 (401)
T 1fc4_A 233 D--VMGRVDIITGTLGKA 248 (401)
T ss_dssp T--CTTCCSEEEEESSST
T ss_pred C--CCcCCcEEEecchhh
Confidence 6 554 888 67774
No 50
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=98.58 E-value=2e-07 Score=73.69 Aligned_cols=71 Identities=8% Similarity=0.005 Sum_probs=54.0
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEE---EeecC
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIV---TVVWN 114 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDiv---t~gK~ 114 (114)
+..++++...+...|. .++++.++++.++|+++|+++|+||++++|+++|..+.....++ ..++++ +++|.
T Consensus 191 ~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~--~~~~vi~~~S~sK~ 264 (427)
T 3dyd_A 191 KTACLIVNNPSNPCGS-VFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLS--TDVPILSCGGLAKR 264 (427)
T ss_dssp TEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGC--SSCCEEEEEESTTT
T ss_pred CCCEEEEECCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhC--CCCcEEEEeecccc
Confidence 4555555544555665 56788899999999999999999999999998886333555666 667777 67774
No 51
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=98.57 E-value=4e-07 Score=70.43 Aligned_cols=74 Identities=5% Similarity=-0.123 Sum_probs=51.5
Q ss_pred CceEEEEEcccC-CCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC-CCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQ-SCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD-DIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~-g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~-~v~PDivt~gK~ 114 (114)
.++.++++.|.. ...|. ..+.++++++.++|++||+++|+||+++++.++|........++. +...++.+++|.
T Consensus 173 ~~~~~v~~~~~~~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 248 (407)
T 2zc0_A 173 QKVKLIYTIPTGQNPMGV-TMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALDNEGRVIVAGTLSKV 248 (407)
T ss_dssp CCEEEEEECCSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGCSSCCEEEEEESTTT
T ss_pred CCceEEEECCCCCCCCCc-CCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcCCCCCEEEEcccccc
Confidence 377887666654 44565 467899999999999999999999999999777652223333330 022356667774
No 52
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=98.57 E-value=1e-07 Score=74.60 Aligned_cols=71 Identities=13% Similarity=-0.027 Sum_probs=54.3
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCcc---chhhh-hcCCCCCcCEEEeec
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTH---WWAFQ-LQGDDIIPDIVTVVW 113 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~---~~~~~-~~g~~v~PDivt~gK 113 (114)
.++++++++..++..|.. .++++++++.++|++||+++|+||++++|.++|.. +.... .++ ..+++.+++|
T Consensus 181 ~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~s~sK 255 (429)
T 1yiz_A 181 EKTKMIIINTPHNPLGKV-MDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWE--RTITIGSAGK 255 (429)
T ss_dssp TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGG--GEEEEEEHHH
T ss_pred cCceEEEECCCCCCCCcc-CCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcC--ceEEEecchh
Confidence 478899998877767755 56889999999999999999999999999877641 11221 234 5666777777
No 53
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=98.56 E-value=7.7e-08 Score=73.43 Aligned_cols=80 Identities=11% Similarity=0.017 Sum_probs=54.6
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccC-c---cchhhh
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVG-T---HWWAFQ 98 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG-~---~~~~~~ 98 (114)
+.+++.+.+ +..+.++..| +...|. ..+.+.++++.++|++||+++|+||++++|.++| . .+++.+
T Consensus 141 ~~l~~~l~~--------~~~~v~i~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~ 210 (377)
T 3fdb_A 141 HDVEKGFQA--------GARSILLCNP-YNPLGM-VFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDT 210 (377)
T ss_dssp HHHHHHHHT--------TCCEEEEESS-BTTTTB-CCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHH
T ss_pred HHHHHHhcc--------CCCEEEEeCC-CCCCCC-CCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHcc
Confidence 455666654 2335556666 555565 4566779999999999999999999999998888 2 133333
Q ss_pred hcCCCCCcCEEEeecC
Q psy1628 99 LQGDDIIPDIVTVVWN 114 (114)
Q Consensus 99 ~~g~~v~PDivt~gK~ 114 (114)
..+ ..+++.+++|+
T Consensus 211 ~~~--~~i~~~s~sK~ 224 (377)
T 3fdb_A 211 AAS--VCITITAPSKA 224 (377)
T ss_dssp HHH--HEEEEECSTTT
T ss_pred CCC--cEEEEEeChHh
Confidence 333 44566677774
No 54
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=98.52 E-value=4.4e-07 Score=70.18 Aligned_cols=79 Identities=15% Similarity=0.141 Sum_probs=58.8
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc-c-ccccCccchhhhhc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV-G-FGRVGTHWWAFQLQ 100 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-G-fgRtG~~~~~~~~~ 100 (114)
+.+++.++++. + ++++++++++.++..|...+ ++++.++|++||+++|.||++. | +++++. .+ .+.+
T Consensus 160 ~~l~~~l~~~~--~---~~~~~v~~~~~~nptG~~~~----~~~l~~~~~~~~~~li~De~~~~~~~~~~~~-~~-~~~~ 228 (398)
T 3a2b_A 160 EDLRAKLSRLP--E---DSAKLICTDGIFSMEGDIVN----LPELTSIANEFDAAVMVDDAHSLGVIGHKGA-GT-ASHF 228 (398)
T ss_dssp HHHHHHHHTSC--S---SSCEEEEEESBCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTTTTTSSGGGC-CH-HHHH
T ss_pred HHHHHHHHhhc--c---CCceEEEEeCCCCCCCCccC----HHHHHHHHHHcCcEEEEECCCcccccCCCCC-ch-Hhhc
Confidence 45677776541 1 27899999999887776654 8999999999999999999996 4 456665 33 4445
Q ss_pred CCCCC--cCEE--EeecC
Q psy1628 101 GDDII--PDIV--TVVWN 114 (114)
Q Consensus 101 g~~v~--PDiv--t~gK~ 114 (114)
+ +. ||++ +++|.
T Consensus 229 ~--~~~~~di~~~s~sK~ 244 (398)
T 3a2b_A 229 G--LNDDVDLIMGTFSKS 244 (398)
T ss_dssp T--CGGGCSEEEEESSST
T ss_pred C--CCcCCeEEEeccccc
Confidence 5 54 7899 77774
No 55
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=98.51 E-value=3.5e-07 Score=71.04 Aligned_cols=81 Identities=12% Similarity=0.028 Sum_probs=54.3
Q ss_pred HHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccC---ccchhhhhc
Q psy1628 24 FFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVG---THWWAFQLQ 100 (114)
Q Consensus 24 ~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG---~~~~~~~~~ 100 (114)
.+++.+.++. .+..++++...+...| ...+.++++++.++|++||+++|+||++++|+++| . .++...+
T Consensus 172 ~l~~~l~~~~------~~~~~v~~~~p~nptG-~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~-~~~~~~~ 243 (412)
T 1ajs_A 172 GFLSDLENAP------EFSIFVLHACAHNPTG-TDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKD-AWAIRYF 243 (412)
T ss_dssp HHHHHHHHSC------TTCEEEEESSSCTTTC-CCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHH-THHHHHH
T ss_pred HHHHHHHhCC------CCcEEEEECCCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCccccc-chHHHHH
Confidence 4566665541 3444554333333334 36788999999999999999999999999998886 4 4455544
Q ss_pred CCCCCcC----EEEeecC
Q psy1628 101 GDDIIPD----IVTVVWN 114 (114)
Q Consensus 101 g~~v~PD----ivt~gK~ 114 (114)
. ..+| +.+++|+
T Consensus 244 ~--~~~~~~i~~~s~sK~ 259 (412)
T 1ajs_A 244 V--SEGFELFCAQSFSKN 259 (412)
T ss_dssp H--HTTCCEEEEEECTTT
T ss_pred h--ccCCcEEEEEecccc
Confidence 3 3455 5566773
No 56
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=98.49 E-value=4.3e-07 Score=71.69 Aligned_cols=81 Identities=14% Similarity=0.010 Sum_probs=57.6
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEc-ccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccc----------ccccC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAE-SLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVG----------FGRVG 91 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiE-Pv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tG----------fgRtG 91 (114)
+.+++.+.+.. + .++++++++ |..+..| ...+.++++++.++|++||+++|.||+++. +.+.|
T Consensus 161 ~~l~~~i~~~t--~---~~~~~v~l~~p~n~ptG-~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g 234 (456)
T 2ez2_A 161 KKLQKLIDEKG--A---ENIAYICLAVTVNLAGG-QPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFEN 234 (456)
T ss_dssp HHHHHHHHHHC--G---GGEEEEEEESSBTTTTS-BCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTT
T ss_pred HHHHHHHHhcc--c---cceeEEEEeccCCCCCC-ccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCC
Confidence 45666665531 1 468999999 5554567 577899999999999999999999999985 44566
Q ss_pred ccchh-h-hhcCCCCCcCEEEee
Q psy1628 92 THWWA-F-QLQGDDIIPDIVTVV 112 (114)
Q Consensus 92 ~~~~~-~-~~~g~~v~PDivt~g 112 (114)
. .+. . +..+ ..+|+++++
T Consensus 235 ~-~~~~~~~~~~--~~~d~~~~S 254 (456)
T 2ez2_A 235 K-SIAEIVHEMF--SYADGCTMS 254 (456)
T ss_dssp S-CHHHHHHHHH--TTCSEEEEE
T ss_pred c-chhhhhhhhc--ccCCEEEEe
Confidence 5 221 1 1234 457999885
No 57
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=98.49 E-value=6.7e-07 Score=70.66 Aligned_cols=58 Identities=16% Similarity=0.122 Sum_probs=48.4
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
+.+++.+.++. + .++++++++|.++..|..+++.+++++++++|++||+++|.||++.
T Consensus 170 ~~le~~i~~~~--~---~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~ 227 (467)
T 1ax4_A 170 KKLKENIAQHG--A---DNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARF 227 (467)
T ss_dssp HHHHHHHHHHC--G---GGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTH
T ss_pred HHHHHHHHhcC--C---CCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhh
Confidence 45677776541 1 4799999999988775678889999999999999999999999876
No 58
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=98.46 E-value=4.4e-07 Score=71.09 Aligned_cols=52 Identities=12% Similarity=-0.017 Sum_probs=42.2
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
.++.++++...+...|.. .+.++++++.++|++||+++|+||++++|.+.|.
T Consensus 187 ~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~ 238 (428)
T 1iay_A 187 IKVKGLILTNPSNPLGTT-LDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTP 238 (428)
T ss_dssp CCEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSS
T ss_pred CceEEEEEcCCCCCCCCc-CCHHHHHHHHHHHHHCCeEEEEeccccccccCCC
Confidence 478887776544445654 5889999999999999999999999999876654
No 59
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=98.45 E-value=8.7e-07 Score=71.00 Aligned_cols=72 Identities=10% Similarity=-0.045 Sum_probs=54.2
Q ss_pred CceEEEEEcccCCC-CCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCcc---chhhhhcCCCCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQSC-GGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTH---WWAFQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~-gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~---~~~~~~~g~~v~PDivt~gK~ 114 (114)
.++.++++.|...+ .|. ..+.+.++++.++|++||+++|.||+++++.+.|.. +++.+..+ ...++.+++|.
T Consensus 215 ~~~k~v~~~~~~~NPtG~-~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~~~~~~~--~vi~~~S~SK~ 290 (448)
T 3aow_A 215 KKVKVVYTVPTFQNPAGV-TMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIKALDNEG--RVIYLGTFSKI 290 (448)
T ss_dssp CCEEEEEECCSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTGGGCTTS--CEEEEEESTTT
T ss_pred CCCeEEEECCCCCCCcCC-CCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHhcCCCC--CEEEEccchhh
Confidence 37888878887555 454 478899999999999999999999999999776641 22333333 55678888884
No 60
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=98.43 E-value=4.1e-07 Score=69.93 Aligned_cols=70 Identities=13% Similarity=-0.018 Sum_probs=52.9
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccc--cCccchhhhhcCCCCCcCEEEeec
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGR--VGTHWWAFQLQGDDIIPDIVTVVW 113 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgR--tG~~~~~~~~~g~~v~PDivt~gK 113 (114)
.++.+++++..+...|.. .+.++++++.++|++||+++|+||++++|.. .+..++.. .++ ..+++.+++|
T Consensus 151 ~~~~~v~~~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~-~~~--~~~~~~s~sK 222 (381)
T 1v2d_A 151 PRTRALLLNTPMNPTGLV-FGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREF-APE--RTFTVGSAGK 222 (381)
T ss_dssp TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHH-CTT--TEEEEEEHHH
T ss_pred cCCEEEEECCCCCCCCCc-cCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHh-cCC--CEEEEeechh
Confidence 478889988766666765 5679999999999999999999999999843 33212222 345 7777888887
No 61
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=98.43 E-value=5.8e-07 Score=69.44 Aligned_cols=52 Identities=15% Similarity=0.147 Sum_probs=45.0
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
.++.+++++..+...|... +++.++++.++|++||+++|+||++++|.++|.
T Consensus 166 ~~~~~v~~~~p~nptG~~~-~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 217 (410)
T 3e2y_A 166 SKTKAIILNTPHNPLGKVY-TRQELQVIADLCVKHDTLCISDEVYEWLVYTGH 217 (410)
T ss_dssp TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC
T ss_pred CCceEEEEeCCCCCCCcCc-CHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCC
Confidence 5788999997776667554 777899999999999999999999999988885
No 62
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=98.42 E-value=5.5e-07 Score=69.49 Aligned_cols=52 Identities=15% Similarity=0.053 Sum_probs=42.0
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
.++.++++...+...|. ..|+++++++.++|++||+++|+||++++|.++|.
T Consensus 163 ~~~~~v~~~~~~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~ 214 (399)
T 1c7n_A 163 KNNKALLFCSPHNPVGR-VWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGY 214 (399)
T ss_dssp TTEEEEEEESSBTTTTB-CCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTC
T ss_pred CCCcEEEEcCCCCCCCc-CcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC
Confidence 36777777444444565 46788999999999999999999999999987774
No 63
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=98.41 E-value=6.7e-07 Score=69.48 Aligned_cols=52 Identities=19% Similarity=0.146 Sum_probs=44.8
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
.++.+++++..+...|... +++.++++.++|++||+++|.||++++|.++|.
T Consensus 173 ~~~~~v~~~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~ 224 (422)
T 3fvs_A 173 SRTKALVLNTPNNPLGKVF-SREELELVASLCQQHDVVCITDEVYQWMVYDGH 224 (422)
T ss_dssp TTEEEEEEESSCTTTCCCC-CHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC
T ss_pred CCceEEEECCCCCCCCcCC-CHHHHHHHHHHHHHcCcEEEEEccchhhccCCC
Confidence 4788888887766667655 888999999999999999999999999988875
No 64
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.41 E-value=1e-06 Score=69.23 Aligned_cols=74 Identities=9% Similarity=-0.088 Sum_probs=50.0
Q ss_pred CceEEEEEcccCCC-CCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC-CCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQSC-GGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD-DIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~-gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~-~v~PDivt~gK~ 114 (114)
.+++++++.|.+.+ .|. ..+.++++++.++|++||+++|.||++++|.+.|........++. +....+.+++|.
T Consensus 186 ~~~~~v~~~~~~~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~ 261 (425)
T 1vp4_A 186 KQVKFIYVVSNFHNPAGV-TTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGPERVVLLNTFSKV 261 (425)
T ss_dssp GGEEEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCTTTEEEEEESTTT
T ss_pred CCceEEEECCCCCCCCCC-cCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCCCCEEEEeccccc
Confidence 37888766665444 454 467899999999999999999999999999877752223333320 022234566774
No 65
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=98.41 E-value=5.8e-07 Score=69.32 Aligned_cols=51 Identities=14% Similarity=0.046 Sum_probs=41.1
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
++.++++...+...|.. .+.++++++.++|++||+++|+||++++|.++|.
T Consensus 162 ~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~ 212 (390)
T 1d2f_A 162 ECKIMLLCSPQNPTGKV-WTCDELEIMADLCERHGVRVISDEIHMDMVWGEQ 212 (390)
T ss_dssp TEEEEEEESSCTTTCCC-CCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSS
T ss_pred CCeEEEEeCCCCCCCcC-cCHHHHHHHHHHHHHcCCEEEEEccccccccCCC
Confidence 67777764334445655 5668999999999999999999999999988775
No 66
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=98.40 E-value=6.4e-07 Score=67.39 Aligned_cols=82 Identities=9% Similarity=0.009 Sum_probs=54.2
Q ss_pred HHHHHHHHhcC-CCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccc--cccCccchhhhh
Q psy1628 23 LFFERIFLSAS-LYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGF--GRVGTHWWAFQL 99 (114)
Q Consensus 23 ~~~e~~~~~~~-~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGf--gRtG~~~~~~~~ 99 (114)
+.+++.+++.. ..+ .++.++++++. +..|... +.++++++.++|++||+++|+||++++| ++++. ....-.
T Consensus 129 ~~l~~~l~~~~~~~~---~~~~~v~~~~~-~ptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~ 202 (359)
T 1svv_A 129 ADIESALHENRSEHM---VIPKLVYISNT-TEVGTQY-TKQELEDISASCKEHGLYLFLDGARLASALSSPVN-DLTLAD 202 (359)
T ss_dssp HHHHHHHHHSCSTTS---CEEEEEEEESS-CTTSCCC-CHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC-CCCHHH
T ss_pred HHHHHHHHHHHhccC---CCceEEEEEcC-CCCceec-CHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc-chhhhh
Confidence 45666666530 011 36899999886 5556554 4699999999999999999999999776 55553 111111
Q ss_pred cCCCCCcCEEEee
Q psy1628 100 QGDDIIPDIVTVV 112 (114)
Q Consensus 100 ~g~~v~PDivt~g 112 (114)
.+ ..+|+++++
T Consensus 203 ~~--~~~d~~~~s 213 (359)
T 1svv_A 203 IA--RLTDMFYIG 213 (359)
T ss_dssp HH--HHCSEEEEE
T ss_pred hh--hcCCEEEEe
Confidence 11 246887764
No 67
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=98.40 E-value=5.9e-07 Score=68.47 Aligned_cols=52 Identities=13% Similarity=-0.021 Sum_probs=42.5
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
.++.+++++..+...|. ..+.+.++++.++|++||+++|+||++++|.++|.
T Consensus 155 ~~~~~v~i~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~ 206 (383)
T 3kax_A 155 QGVKLMLLCSPHNPIGR-VWKKEELTKLGSLCTKYNVIVVADEIHSDIIYADH 206 (383)
T ss_dssp TTCCEEEEESSBTTTTB-CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTC
T ss_pred cCCeEEEEeCCCCCCCc-CcCHHHHHHHHHHHHHCCCEEEEEccccccccCCC
Confidence 35667777665555665 55778899999999999999999999999988875
No 68
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=98.40 E-value=6.8e-07 Score=71.11 Aligned_cols=62 Identities=16% Similarity=0.042 Sum_probs=50.5
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEE--Eeec
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIV--TVVW 113 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDiv--t~gK 113 (114)
.+++++++|+.++..|.+.+ ++++.++|++||+++|+||++++++..+. .+ + ..+|++ +++|
T Consensus 143 ~~~~~v~~~~~~n~~G~~~~----l~~i~~~a~~~g~~livD~~~~~~g~~~~-~~-----~--~~~Di~~~s~~K 206 (421)
T 2ctz_A 143 EKTRAWWVESIGNPALNIPD----LEALAQAAREKGVALIVDNTFGMGGYLLR-PL-----A--WGAALVTHSLTK 206 (421)
T ss_dssp TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHTCEEEEECGGGGGGTSCC-GG-----G--GTCSEEEEETTT
T ss_pred cCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCcccccccCC-cc-----c--cCCeEEEECCcc
Confidence 57899999999888787666 89999999999999999999977876665 32 2 447988 5556
No 69
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.40 E-value=9.7e-07 Score=68.90 Aligned_cols=70 Identities=14% Similarity=0.002 Sum_probs=52.4
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCC-CcCEE--EeecC
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDI-IPDIV--TVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v-~PDiv--t~gK~ 114 (114)
.++.+++++..+...|.. .++++++++.++|++||+++|.||+++++.++|. .++. ..+ . ..|++ +++|.
T Consensus 173 ~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~-~~~~-~~~--~~~~~i~~~s~sK~ 245 (409)
T 2gb3_A 173 ERTKGIVLSNPCNPTGVV-YGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGE-FASA-LSI--ESDKVVVIDSVSKK 245 (409)
T ss_dssp TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSC-CCCG-GGS--CCTTEEEEEESTTT
T ss_pred cCCeEEEECCCCCCCCCC-cCHHHHHHHHHHHHHcCCEEEEECcccccccCCC-CCCc-ccc--CCCCEEEEecchhc
Confidence 467888888766666765 4679999999999999999999999999987775 4443 222 3 34766 45663
No 70
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=98.39 E-value=5.3e-07 Score=69.43 Aligned_cols=70 Identities=11% Similarity=0.194 Sum_probs=47.0
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcC---CCCCcCEEEeecC
Q psy1628 43 CAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQG---DDIIPDIVTVVWN 114 (114)
Q Consensus 43 AAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g---~~v~PDivt~gK~ 114 (114)
+.++..| +...|. ..+.+.++++.++|++||+++|+||++++|.++|........++ .+...++.+++|+
T Consensus 182 ~v~~~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~ 254 (407)
T 3nra_A 182 VFLFSNP-NNPAGV-VYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKT 254 (407)
T ss_dssp EEEEESS-CTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSST
T ss_pred EEEEcCC-CCCCCc-ccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccc
Confidence 3344555 544564 55788999999999999999999999999988776222222221 0133445566774
No 71
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=98.37 E-value=5.3e-07 Score=69.85 Aligned_cols=61 Identities=16% Similarity=0.117 Sum_probs=45.4
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESL-QSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv-~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
+.+++.+++ .++.++++-|. +...|. ..+.++++++.++|++||+++|.||++++|.++|.
T Consensus 152 ~~l~~~l~~--------~~~~~v~~~~~~~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~ 213 (397)
T 2zyj_A 152 DALEEVLKR--------ERPRFLYLIPSFQNPTGG-LTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEA 213 (397)
T ss_dssp HHHHHHHHH--------CCCSCEEECCBSCTTTCC-BCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSC
T ss_pred HHHHHHHhh--------cCCeEEEECCCCcCCCCC-cCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCC
Confidence 345666654 24556655444 333464 46788999999999999999999999999987775
No 72
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=98.37 E-value=5.8e-07 Score=68.61 Aligned_cols=80 Identities=13% Similarity=0.071 Sum_probs=57.8
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh--CCeEEEccccccccccCccchhhhhc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAA--GGVCVADEVQVGFGRVGTHWWAFQLQ 100 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~--gillI~DEV~tGfgRtG~~~~~~~~~ 100 (114)
+.+++.+.++ ++.+++++..+...|... +.+.++++.++|++| |+++|+||++++|+..+. ......+
T Consensus 147 ~~l~~~l~~~--------~~~~v~~~~~~nptG~~~-~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~ 216 (367)
T 3euc_A 147 GAMLAAMAEH--------QPAIVYLAYPNNPTGNLF-DAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESW-MSRLTDF 216 (367)
T ss_dssp HHHHHHHHHH--------CCSEEEEESSCTTTCCCC-CHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCS-GGGGGTC
T ss_pred HHHHHHhhcc--------CCCEEEEcCCCCCCCCCC-CHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccch-HHHHhhC
Confidence 3456666552 556777776565566544 667899999999999 999999999999976554 4444444
Q ss_pred CCCCCcCEEEeecC
Q psy1628 101 GDDIIPDIVTVVWN 114 (114)
Q Consensus 101 g~~v~PDivt~gK~ 114 (114)
+ ...++.+++|.
T Consensus 217 ~--~~i~~~s~sK~ 228 (367)
T 3euc_A 217 G--NLLVMRTVSKL 228 (367)
T ss_dssp T--TEEEEEECCCT
T ss_pred C--CEEEEecchhh
Confidence 4 55677788884
No 73
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=98.37 E-value=4.1e-07 Score=71.90 Aligned_cols=58 Identities=16% Similarity=0.054 Sum_probs=47.1
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
+.+|+.++++. + +++++++++|.++..|..+++.+++++++++|++||+++|.|+.+.
T Consensus 170 ~~Le~~i~~~~--~---~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~ 227 (467)
T 2oqx_A 170 EGLERGIEEVG--P---NNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARF 227 (467)
T ss_dssp HHHHHHHHHHC--G---GGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTH
T ss_pred HHHHHHHHhcC--C---CceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhh
Confidence 45677776541 1 4799999999988765578899999999999999999999996654
No 74
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=98.36 E-value=8.1e-07 Score=68.43 Aligned_cols=62 Identities=13% Similarity=0.042 Sum_probs=46.2
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVG 91 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG 91 (114)
+.+++.++++ + .+.+++++...+...|. ..+.++++++.++|++||+++|.||++++|+++|
T Consensus 157 ~~l~~~l~~~---~---~~~~~~~~~~~~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~ 218 (394)
T 2ay1_A 157 EGMKADLAAA---K---KGDMVLLHGCCHNPTGA-NLTLDQWAEIASILEKTGALPLIDLAYQGFGDGL 218 (394)
T ss_dssp HHHHHHHHTC---C---TTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCH
T ss_pred HHHHHHHHhC---C---CCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEecCccccccCc
Confidence 3456666543 1 34556665655555564 5788999999999999999999999999998764
No 75
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=98.35 E-value=8.6e-07 Score=70.50 Aligned_cols=72 Identities=10% Similarity=-0.021 Sum_probs=55.0
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc--cchhh--hhcCCCCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT--HWWAF--QLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~--~~~~~--~~~g~~v~PDivt~gK~ 114 (114)
.++.+++++..+...|.. .+++.++++.++|++||+++|.||++++|.++|. .+... ..++ ..+++.+++|+
T Consensus 200 ~~~~~v~l~~p~nptG~~-~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~--~~i~i~S~sK~ 275 (447)
T 3b46_A 200 SKTKAVIINTPHNPIGKV-FTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQ--LTLTVGSAGKS 275 (447)
T ss_dssp TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHT--TEEEEEEHHHH
T ss_pred cCCeEEEEeCCCCCCCcc-cCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCC--cEEEEecCchh
Confidence 478888888766666765 5689999999999999999999999999987763 12222 2345 66777788873
No 76
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=98.35 E-value=8.4e-07 Score=69.16 Aligned_cols=52 Identities=21% Similarity=0.084 Sum_probs=44.2
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
.++.+++++..++..|.. .+.++++++.++|++||+++|+||+++++.++|.
T Consensus 159 ~~~~~v~l~~~~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~ 210 (411)
T 2o0r_A 159 PRTRALIINSPHNPTGAV-LSATELAAIAEIAVAANLVVITDEVYEHLVFDHA 210 (411)
T ss_dssp TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC
T ss_pred cCceEEEEeCCCCCCCCC-CCHHHHHHHHHHHHHcCCEEEEEccccccccCCC
Confidence 467888888766666755 5688999999999999999999999999987764
No 77
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=98.33 E-value=7.1e-07 Score=68.63 Aligned_cols=81 Identities=12% Similarity=0.007 Sum_probs=51.5
Q ss_pred HHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccC--ccchhhhhcC
Q psy1628 24 FFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVG--THWWAFQLQG 101 (114)
Q Consensus 24 ~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG--~~~~~~~~~g 101 (114)
.+++.+.++. .+..++++...+...|. ..+.++++++.++|++||+++|.||++++|++.| . .+....+.
T Consensus 161 ~l~~~l~~~~------~~~~~v~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~ 232 (396)
T 2q7w_A 161 ALINSLNEAQ------AGDVVLFHGCCHNPTGI-DPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEED-AEGLRAFA 232 (396)
T ss_dssp HHHHHHTTCC------TTCEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHH-THHHHHHH
T ss_pred HHHHHHHhCC------CCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHCCCEEEEecccccccCCccch-hHHHHHHH
Confidence 4555555431 23444444333333454 6778999999999999999999999999998764 3 34444333
Q ss_pred CCCCcC----EEEeecC
Q psy1628 102 DDIIPD----IVTVVWN 114 (114)
Q Consensus 102 ~~v~PD----ivt~gK~ 114 (114)
..+| +.+++|+
T Consensus 233 --~~~~~~i~~~s~sK~ 247 (396)
T 2q7w_A 233 --AMHKELIVASSYSXN 247 (396)
T ss_dssp --HHCSCEEEEEECTTT
T ss_pred --hcCCcEEEEEecccc
Confidence 2334 4455663
No 78
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=97.67 E-value=6.6e-08 Score=75.01 Aligned_cols=71 Identities=10% Similarity=0.102 Sum_probs=52.3
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCcc---chhhhh--cCCCCCcCEEEeecC
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTH---WWAFQL--QGDDIIPDIVTVVWN 114 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~---~~~~~~--~g~~v~PDivt~gK~ 114 (114)
++.++++...+...|. ..++++++++.++|++||+++|+||++++|.++|.. +++... .+ ..+++.+++|+
T Consensus 164 ~~~~v~~~~~~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~--~~i~~~s~sK~ 239 (392)
T 3b1d_A 164 DVKLYLLCNPHNPGGR-VWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKD--FALVLSSATKT 239 (392)
Confidence 5667777554544565 466779999999999999999999999999887731 333322 34 56778888884
No 79
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=98.32 E-value=1.2e-06 Score=67.43 Aligned_cols=72 Identities=10% Similarity=-0.088 Sum_probs=53.6
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCcc---chhhh--hcCCCCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTH---WWAFQ--LQGDDIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~---~~~~~--~~g~~v~PDivt~gK~ 114 (114)
.++.++++++.+...|.. .|++.++++.++|++||+++|.||++++|.+.|.. ++... .++ ..+++.+++|.
T Consensus 162 ~~~~~v~~~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~s~sK~ 238 (388)
T 1j32_A 162 PKTKLLVFNTPSNPTGMV-YTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYE--RSVVCSGFAKT 238 (388)
T ss_dssp TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHH--TEEEEEESTTT
T ss_pred cCceEEEEeCCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccC--CEEEEeechhc
Confidence 467888888766656765 46789999999999999999999999999776631 22222 134 56677778884
No 80
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=98.30 E-value=1.1e-06 Score=67.55 Aligned_cols=71 Identities=13% Similarity=0.023 Sum_probs=51.3
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhh--------cCCCCCcCEEEee
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQL--------QGDDIIPDIVTVV 112 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~--------~g~~v~PDivt~g 112 (114)
++.+++++..+...|.. .+.+.++++.++|++||+++|.||++++|.++|...++... ++ ..+++.+++
T Consensus 168 ~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~s~s 244 (396)
T 3jtx_A 168 RTKLVFVCSPNNPSGSV-LDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQ--KLLMFTSLS 244 (396)
T ss_dssp TEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCT--TEEEEEEST
T ss_pred CcEEEEEECCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccC--cEEEEeccc
Confidence 56677775445555654 45666999999999999999999999999888721333221 34 667788888
Q ss_pred cC
Q psy1628 113 WN 114 (114)
Q Consensus 113 K~ 114 (114)
|+
T Consensus 245 K~ 246 (396)
T 3jtx_A 245 KR 246 (396)
T ss_dssp TT
T ss_pred cc
Confidence 83
No 81
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=98.29 E-value=1.1e-06 Score=67.68 Aligned_cols=71 Identities=7% Similarity=-0.027 Sum_probs=52.8
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc---cchhhh-hcCCCCCcCEEEeec
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT---HWWAFQ-LQGDDIIPDIVTVVW 113 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~---~~~~~~-~~g~~v~PDivt~gK 113 (114)
.++.+++++..+...|.. .|.+.++++.++|++||+++|.||++++|.+.|. .++..+ .++ ....+.+++|
T Consensus 162 ~~~~~v~l~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~--~~i~~~s~sK 236 (386)
T 1u08_A 162 ERTRLVILNTPHNPSATV-WQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRE--RAVAVSSFGK 236 (386)
T ss_dssp TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHT--TEEEEEEHHH
T ss_pred ccCEEEEEeCCCCCCCcc-CCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccC--cEEEEecchh
Confidence 477888887666556754 5788999999999999999999999999877663 122332 344 5556667777
No 82
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=98.28 E-value=1.3e-06 Score=66.76 Aligned_cols=69 Identities=10% Similarity=-0.134 Sum_probs=49.5
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhh---------hcCCCCCcCEEEee
Q psy1628 42 PCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQ---------LQGDDIIPDIVTVV 112 (114)
Q Consensus 42 iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~---------~~g~~v~PDivt~g 112 (114)
+.++++...+...|. ..+.+.++++.++|++||+++|.||++++|.++|. .++.. .++ ...++.+++
T Consensus 155 ~~~v~~~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~i~~~s~s 230 (376)
T 3ezs_A 155 VDLVILNSPNNPTGR-TLSLEELISWVKLALKHDFILINDECYSEIYENTP-PPSLLEACMLAGNEAFK--NVLVIHSLS 230 (376)
T ss_dssp CSEEEECSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSC-CCCHHHHHHHTTCTTCT--TEEEEEEST
T ss_pred CCEEEEcCCCCCcCC-CCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCC-CCCHHHccccccccccC--cEEEEecch
Confidence 445555433444565 44777899999999999999999999999988875 33332 233 556677788
Q ss_pred cC
Q psy1628 113 WN 114 (114)
Q Consensus 113 K~ 114 (114)
|+
T Consensus 231 K~ 232 (376)
T 3ezs_A 231 KR 232 (376)
T ss_dssp TT
T ss_pred hc
Confidence 84
No 83
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=98.27 E-value=2e-06 Score=67.70 Aligned_cols=73 Identities=14% Similarity=0.023 Sum_probs=51.7
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcC--CCCCcCEEEeecC
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQG--DDIIPDIVTVVWN 114 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g--~~v~PDivt~gK~ 114 (114)
++.+++++..+...|. .++.+.++++.++|++||+++|+||++++|.+.|........+. .+...++.+++|+
T Consensus 209 ~~~~v~l~~p~NPtG~-~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 283 (449)
T 3qgu_A 209 RTDIIFFCSPNNPTGA-AATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYEIPGADEVAIETCSFSKY 283 (449)
T ss_dssp CCSEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEEEEECSGG
T ss_pred CCCEEEEeCCCCCCCC-cCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhhccCCCCcEEEEecchhh
Confidence 5678888755544564 55778899999999999999999999999988764122222221 0144567788884
No 84
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=98.25 E-value=2.9e-06 Score=66.76 Aligned_cols=72 Identities=10% Similarity=0.055 Sum_probs=51.3
Q ss_pred CceEEEEEcccCCC-CCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCcc---chhhhhcCCCCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQSC-GGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTH---WWAFQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~-gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~---~~~~~~~g~~v~PDivt~gK~ 114 (114)
.++.++++.|.+.+ .|. ..+.+.++++.++|++||+++|.||+++++...|.. +.+....+ ....+.+++|+
T Consensus 189 ~~~~~v~~~~~~~NPtG~-~~~~~~l~~l~~~a~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~--~~i~~~s~SK~ 264 (425)
T 2r2n_A 189 NTPKFLYTVPNGNNPTGN-SLTSERKKEIYELARKYDFLIIEDDPYYFLQFNKFRVPTFLSMDVDG--RVIRADSFSKI 264 (425)
T ss_dssp CCCSEEEECCSSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSSCCCCTGGGCTTS--CEEEEEESTTT
T ss_pred CCceEEEECCCCcCCCCC-cCCHHHHHHHHHHHHHcCCEEEEECCcccccCCCCCCCCccccCCCC--CEEEEccchhh
Confidence 35778888886554 454 468899999999999999999999999988666641 22222222 33455677774
No 85
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=98.25 E-value=2.5e-06 Score=65.23 Aligned_cols=70 Identities=13% Similarity=0.068 Sum_probs=47.1
Q ss_pred ceEEEE-EcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhh-hhcCCCCCcCEEEeecC
Q psy1628 41 YPCAFF-AESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAF-QLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 41 ~iAAvi-iEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~-~~~g~~v~PDivt~gK~ 114 (114)
++.+++ .+| +...|. ..+.++++++.++|++||+++|+||++++|++.+...+.. +.++ ....+.+++|.
T Consensus 146 ~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~i~~~s~sK~ 217 (364)
T 1lc5_A 146 DLDCLFLCTP-NNPTGL-LPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNP--HIWVLRSLTKF 217 (364)
T ss_dssp TCCEEEEESS-CTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCT--TEEEEEESTTT
T ss_pred CCCEEEEeCC-CCCCCC-CCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCC--CEEEEEECchh
Confidence 444444 566 444454 4678999999999999999999999999997655412221 2233 33445567774
No 86
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=98.25 E-value=1.7e-06 Score=66.70 Aligned_cols=51 Identities=14% Similarity=0.177 Sum_probs=41.8
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
++.+++++..+...|.. .+.+.++++.++|++||+++|.||++++|.++|.
T Consensus 161 ~~~~v~i~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 211 (391)
T 3h14_A 161 DLAGLMVASPANPTGTM-LDHAAMGALIEAAQAQGASFISDEIYHGIEYEAK 211 (391)
T ss_dssp CCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSC
T ss_pred CCeEEEECCCCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEECcchhcccCCC
Confidence 45677777666656654 4667799999999999999999999999988775
No 87
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=98.24 E-value=1.5e-06 Score=66.26 Aligned_cols=65 Identities=8% Similarity=-0.114 Sum_probs=48.7
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEeecC
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~gK~ 114 (114)
.++.++++.+.++..|...+ +++++++|++||+++|.||+++++++.- ..+.++ +...+.+++|+
T Consensus 143 ~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~~~~~~~~~~----~~~~~~--~d~~~~s~~K~ 207 (376)
T 3f0h_A 143 QNFTGLLVNVDETSTAVLYD----TMMIGEFCKKNNMFFVCDCVSAFLADPF----NMNECG--ADVMITGSQKV 207 (376)
T ss_dssp SCCCEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTTTTSCC----CHHHHT--CSEEEEETTTT
T ss_pred cCceEEEEecccCCcceecC----HHHHHHHHHHcCCEEEEEcCccccCccc----cccccC--ccEEEecCccc
Confidence 57889999988887887766 9999999999999999999999775542 345555 43333333463
No 88
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=98.24 E-value=2.8e-06 Score=65.28 Aligned_cols=52 Identities=19% Similarity=0.095 Sum_probs=42.9
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
.++.+++++..+...|.. .+.+.++++.++|++||+++|.||+++++.+.|.
T Consensus 159 ~~~~~v~~~~~~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 210 (389)
T 1gd9_A 159 DKTRALIINSPCNPTGAV-LTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDA 210 (389)
T ss_dssp TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC
T ss_pred cCceEEEEECCCCCCCcC-CCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCC
Confidence 367788887665556754 6788999999999999999999999999977664
No 89
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=98.22 E-value=1.3e-06 Score=66.82 Aligned_cols=50 Identities=10% Similarity=0.001 Sum_probs=41.0
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 42 PCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 42 iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
+.+++++..+...|. ..+++.++++.++|++||+++|+||++++|.++|.
T Consensus 165 ~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~ 214 (391)
T 4dq6_A 165 VKLFILCNPHNPVGR-VWTKDELKKLGDICLKHNVKIISDEIHSDIILKKH 214 (391)
T ss_dssp EEEEEEESSBTTTTB-CCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC
T ss_pred CCEEEEECCCCCCCc-CcCHHHHHHHHHHHHHcCCEEEeeccccccccCCC
Confidence 666766665555665 45667799999999999999999999999988875
No 90
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=98.22 E-value=3.9e-06 Score=65.25 Aligned_cols=59 Identities=12% Similarity=-0.058 Sum_probs=45.9
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQ 100 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~ 100 (114)
.++.+++++..+...|.. .+++.++++.++|++||+++|.||++++|.+.+. ......+
T Consensus 173 ~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~-~~~~~~~ 231 (406)
T 1xi9_A 173 DRTKAIAVINPNNPTGAL-YDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGE-HISPGSL 231 (406)
T ss_dssp TTEEEEEEESSCTTTCCC-CCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSC-CCCHHHH
T ss_pred cCceEEEEECCCCCCCCC-cCHHHHHHHHHHHHHcCCEEEEEcCccccccCCC-CCCHHHc
Confidence 467888888766666754 5778999999999999999999999999977443 3444444
No 91
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=98.21 E-value=3.7e-06 Score=65.24 Aligned_cols=47 Identities=17% Similarity=0.162 Sum_probs=40.4
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRV 90 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRt 90 (114)
.+++++++++.++..|...+ +++++++|++||+++|+||+++++...
T Consensus 136 ~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~~~~ 182 (386)
T 1cs1_A 136 EKPKLVLVESPSNPLLRVVD----IAKICHLAREVGAVSVVDNTFLSPALQ 182 (386)
T ss_dssp TCCSEEEEECSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTTCTTTC
T ss_pred cCCcEEEEeCCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCcccccC
Confidence 36789999999888787763 899999999999999999999988543
No 92
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=98.20 E-value=3.9e-06 Score=65.04 Aligned_cols=52 Identities=13% Similarity=0.071 Sum_probs=43.0
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
.++.+++++..+...|. ..|++.++++.++|++||+++|.||+++++...|.
T Consensus 173 ~~~~~v~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~ 224 (389)
T 1o4s_A 173 GKTKAVLINSPNNPTGV-VYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDE 224 (389)
T ss_dssp TTEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSC
T ss_pred cCceEEEEcCCCCCCCC-CCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC
Confidence 46778888766655675 45788999999999999999999999999877664
No 93
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=98.20 E-value=1.5e-06 Score=66.12 Aligned_cols=71 Identities=20% Similarity=0.113 Sum_probs=51.1
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
+.+++.+++ +++.++++++.++..|...+ +++++++|++||+++|+||+++ +| +. .+..+.+
T Consensus 138 ~~l~~~i~~--------~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~-~g--~~-~~~~~~~-- 199 (393)
T 3kgw_A 138 QEVEEGLAQ--------HKPVLLFLVHGESSTGVVQP----LDGFGELCHRYQCLLLVDSVAS-LG--GV-PIYMDQQ-- 199 (393)
T ss_dssp HHHHHHHHH--------HCCSEEEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-TT--TS-CCCTTTT--
T ss_pred HHHHHHHhh--------CCCcEEEEeccCCcchhhcc----HHHHHHHHHHcCCEEEEECCcc-cc--Cc-ccchhhc--
Confidence 345666654 26788999998887787665 7799999999999999999987 22 21 2333333
Q ss_pred CCCcCEEEee--c
Q psy1628 103 DIIPDIVTVV--W 113 (114)
Q Consensus 103 ~v~PDivt~g--K 113 (114)
.+|+++++ |
T Consensus 200 --~~d~~~~s~sK 210 (393)
T 3kgw_A 200 --GIDIMYSSSQK 210 (393)
T ss_dssp --TCCEEEEESSS
T ss_pred --CCCEEEecCcc
Confidence 36888877 7
No 94
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=98.19 E-value=2.2e-06 Score=66.63 Aligned_cols=75 Identities=20% Similarity=0.285 Sum_probs=48.3
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
+.+++.++++ ++.++++.......| ...+.+++++++++|++||+++|+||+++ | +. .+..+.++
T Consensus 125 ~~l~~~i~~~--------~~~~v~~~~~~~~~G-~~~~~~~l~~i~~~~~~~~~~li~D~~~~--g--~~-~~~~~~~~- 189 (379)
T 3ke3_A 125 ETAVAKIKED--------KSAIVYAPHVETSSG-IILSEEYIKALSEAVHSVGGLLVIDCIAS--G--CV-WLDMKELG- 189 (379)
T ss_dssp HHHHHHHHHH--------TCSEEEEESEETTTT-EECCHHHHHHHHHHHHHTTCEEEEECTTC--T--TC-CCCHHHHT-
T ss_pred HHHHHHHhhc--------CCcEEEEEeecCCCc-eeCCHHHHHHHHHHHHHcCCEEEEEeccc--C--Cc-cccccccC-
Confidence 3456666542 233455544444445 45568899999999999999999999997 3 33 45566666
Q ss_pred CCCcCEEEeec
Q psy1628 103 DIIPDIVTVVW 113 (114)
Q Consensus 103 ~v~PDivt~gK 113 (114)
+.+.+.+..|
T Consensus 190 -~d~~~~s~~K 199 (379)
T 3ke3_A 190 -IDVLISAPQK 199 (379)
T ss_dssp -CSEEEECTTT
T ss_pred -CCEEEecchh
Confidence 5333333336
No 95
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=98.18 E-value=4e-06 Score=65.20 Aligned_cols=52 Identities=12% Similarity=-0.049 Sum_probs=42.4
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
.++.++++...+...|.. .+.+.++++.++|+++|+++|.||++++|+..|.
T Consensus 162 ~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 213 (400)
T 3asa_A 162 THIDILCLCSPNNPTGTV-LNKDQLRAIVHYAIEHEILILFDAAYSTFISDPS 213 (400)
T ss_dssp CCCSEEEEESSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTT
T ss_pred cCccEEEEeCCCCCCCCc-CCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCC
Confidence 357788887555555654 6789999999999999999999999999977664
No 96
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=98.16 E-value=3.8e-06 Score=66.18 Aligned_cols=61 Identities=10% Similarity=-0.062 Sum_probs=47.7
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEE--eec
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVT--VVW 113 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt--~gK 113 (114)
.+++++++|+.++..|.+.+ +++++++|++||+++|+||+++.+ +..+..+ ..+|+++ ++|
T Consensus 150 ~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~g~~li~D~~~~~~-------~~~~~~~--~~~di~~~S~sK 212 (392)
T 3qhx_A 150 PTTRLIWVETPTNPLLSIAD----IAGIAQLGADSSAKVLVDNTFASP-------ALQQPLS--LGADVVLHSTTK 212 (392)
T ss_dssp TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHTCEEEEECTTTCT-------TTCCGGG--GTCSEEEEETTT
T ss_pred CCCeEEEEECCCCCCcEEec----HHHHHHHHHHcCCEEEEECCCccc-------ccCChHH--hCCcEEEEcCcc
Confidence 58899999999887787654 999999999999999999999732 1223333 5679988 566
No 97
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=98.16 E-value=5.4e-06 Score=64.22 Aligned_cols=61 Identities=15% Similarity=0.141 Sum_probs=47.6
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEee
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~g 112 (114)
.+++++++++.++..|...+ +++|+++|++||+++|+||++++ +.. ...... ..+|+++++
T Consensus 162 ~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~-~~~-----~~~~~~--~~~di~~~s 222 (423)
T 3lvm_A 162 DDTILVSIMHVNNEIGVVQD----IAAIGEMCRARGIIYHVDATQSV-GKL-----PIDLSQ--LKVDLMSFS 222 (423)
T ss_dssp TTEEEEECCSBCTTTCBBCC----HHHHHHHHHHHTCEEEEECTTTT-TTS-----CCCTTT--SCCSEEEEE
T ss_pred CCcEEEEEeCCCCCCccccC----HHHHHHHHHHcCCEEEEEhhhhc-CCC-----CcChhh--cCCCEEEec
Confidence 57899999999887787766 88999999999999999999874 222 122223 568999988
No 98
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=98.15 E-value=3.9e-06 Score=65.35 Aligned_cols=70 Identities=11% Similarity=0.017 Sum_probs=47.3
Q ss_pred ceEEEEE-cccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhh----cCCCCCcCEEEeecC
Q psy1628 41 YPCAFFA-ESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQL----QGDDIIPDIVTVVWN 114 (114)
Q Consensus 41 ~iAAvii-EPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~----~g~~v~PDivt~gK~ 114 (114)
++.++++ .| +...|. ..+.++++++.++|++||+++|+||++++|.++|....+... .+ ....+.+++|.
T Consensus 172 ~~~~v~l~~p-~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~--~~i~~~s~sK~ 246 (412)
T 2x5d_A 172 KPRMMILGFP-SNPTAQ-CVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKD--IAVEFFTLSKS 246 (412)
T ss_dssp CCSEEEEESS-CTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGG--TEEEEEECC-C
T ss_pred CceEEEECCC-CCCCCC-cCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccC--cEEEEecCccc
Confidence 5566666 44 443564 457899999999999999999999999999776641122222 22 44456677774
No 99
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=98.14 E-value=5e-06 Score=62.97 Aligned_cols=54 Identities=13% Similarity=-0.008 Sum_probs=41.5
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccccc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFG 88 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfg 88 (114)
+.+++.+++ .++.++++++..+..|...+ ++++.++|++||+++|+||+++++.
T Consensus 161 ~~l~~~i~~--------~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~~~ 214 (397)
T 3f9t_A 161 KFVKDAVED--------YDVDGIIGIAGTTELGTIDN----IEELSKIAKENNIYIHVDAAFGGLV 214 (397)
T ss_dssp HHHHHHHHH--------SCCCEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEECTTGGGT
T ss_pred HHHHHHHhh--------cCCeEEEEECCCCCCCCCCC----HHHHHHHHHHhCCeEEEEccccchh
Confidence 355666654 25667887877666676644 8899999999999999999999863
No 100
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=98.13 E-value=7.1e-06 Score=63.68 Aligned_cols=49 Identities=10% Similarity=0.072 Sum_probs=38.7
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 42 PCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 42 iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
.+.++.+| ....|. ..++++++++.++|++||+++|.||++++|.++|.
T Consensus 179 ~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~ 227 (416)
T 1bw0_A 179 KLLIVTNP-SNPCGS-NFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGK 227 (416)
T ss_dssp EEEEEESS-CTTTCC-CCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSS
T ss_pred eEEEEeCC-CCCCCc-ccCHHHHHHHHHHHHHcCCEEEEEccccccccCCC
Confidence 34556666 333464 46789999999999999999999999999876663
No 101
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=98.13 E-value=4e-06 Score=64.24 Aligned_cols=51 Identities=16% Similarity=0.101 Sum_probs=41.2
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
++.++++...+...|.. .+.++++++.++|++||+++|.||++++|.+.|.
T Consensus 158 ~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~ 208 (376)
T 2dou_A 158 EAKVLLLNYPNNPTGAV-ADWGYFEEALGLARKHGLWLIHDNPYVDQVYEGE 208 (376)
T ss_dssp HEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSC
T ss_pred CceEEEECCCCCCcCcc-CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC
Confidence 56778876434445654 5789999999999999999999999999977664
No 102
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=98.11 E-value=3.9e-06 Score=66.95 Aligned_cols=42 Identities=12% Similarity=0.064 Sum_probs=38.1
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
.+++++++|+.++..|...+ +++++++|++||+++|+||+++
T Consensus 151 ~~~~~v~~e~~~np~G~~~~----l~~i~~la~~~g~~livDe~~~ 192 (400)
T 3nmy_A 151 ADTKMVWIETPTNPMLKLVD----IAAIAVIARKHGLLTVVDNTFA 192 (400)
T ss_dssp TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTT
T ss_pred cCCCEEEEECCCCCCCeeec----HHHHHHHHHHcCCEEEEECCCc
Confidence 57899999999888887764 9999999999999999999996
No 103
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=98.10 E-value=5.3e-06 Score=63.44 Aligned_cols=48 Identities=19% Similarity=0.173 Sum_probs=38.6
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
.++.+++++..++..|...+.+ +.++|++||+++|.||+++++.+.|.
T Consensus 153 ~~~~~v~~~~p~nptG~~~~~~-----l~~~~~~~~~~li~De~~~~~~~~g~ 200 (370)
T 2z61_A 153 DKTKAIIINSPSNPLGEVIDRE-----IYEFAYENIPYIISDEIYNGLVYEGK 200 (370)
T ss_dssp SSEEEEEEESSCTTTCCCCCHH-----HHHHHHHHCSEEEEECTTTTCBSSSC
T ss_pred cCceEEEEcCCCCCcCcccCHH-----HHHHHHHcCCEEEEEcchhhcccCCC
Confidence 4677888876666567665544 99999999999999999999977765
No 104
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=98.09 E-value=3.6e-06 Score=65.63 Aligned_cols=57 Identities=14% Similarity=-0.104 Sum_probs=44.3
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHH-HHhCCeEEEcccccc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHV-RAAGGVCVADEVQVG 86 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc-~~~gillI~DEV~tG 86 (114)
+.+++.+++. .++.++++.|.+++-.-...+.+.++++.++| ++||+++|.||+++.
T Consensus 161 ~~l~~~l~~~-------~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~ 218 (423)
T 3ez1_A 161 DAVERLAGTD-------PSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRV 218 (423)
T ss_dssp HHHHHHHHSC-------TTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSS
T ss_pred HHHHHHHhhC-------CCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcch
Confidence 3455566432 57889999997766433556667799999999 999999999999994
No 105
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=98.06 E-value=3.8e-06 Score=65.66 Aligned_cols=71 Identities=11% Similarity=0.051 Sum_probs=49.8
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc--cchhhh-hcCCCCCcCEEEeecC
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT--HWWAFQ-LQGDDIIPDIVTVVWN 114 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~--~~~~~~-~~g~~v~PDivt~gK~ 114 (114)
++.++++...+...|.. .+.++++++.++|++||+++|.||++++|.++|. .++... .++ ....+.+++|.
T Consensus 181 ~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~--~~i~~~s~sK~ 254 (404)
T 2o1b_A 181 KTKLIYLTYPNNPTGST-ATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPSILASENGKD--VAIEIYSLSKG 254 (404)
T ss_dssp HEEEEEECSSCTTTCCC-CCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCCGGGSTTHHH--HEEEEEESTTT
T ss_pred CceEEEEcCCCCCCCcc-CCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCC--CEEEEEecchh
Confidence 56788886434445654 6789999999999999999999999999976663 122221 122 34456677774
No 106
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=98.03 E-value=1.2e-05 Score=60.83 Aligned_cols=48 Identities=13% Similarity=0.074 Sum_probs=36.2
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccccccc
Q psy1628 42 PCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRV 90 (114)
Q Consensus 42 iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRt 90 (114)
..++++...+...|. ..+.+.++++.++|++||+++|.||++++|.+.
T Consensus 145 ~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~ 192 (361)
T 3ftb_A 145 VDSVIIGNPNNPNGG-LINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGD 192 (361)
T ss_dssp CSEEEEETTBTTTTB-CCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCC
T ss_pred CCEEEEeCCCCCCCC-CCCHHHHHHHHHHhhhcCCEEEEECcchhhcCC
Confidence 334444333444454 557778999999999999999999999999775
No 107
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=98.01 E-value=8.3e-06 Score=62.81 Aligned_cols=71 Identities=13% Similarity=0.064 Sum_probs=47.2
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEc-ccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccc-ccccccCccchhhhhc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAE-SLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQ-VGFGRVGTHWWAFQLQ 100 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiE-Pv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~-tGfgRtG~~~~~~~~~ 100 (114)
+.+++.++++ ++++++++ |..+ . ..+ +++++++|++||+++|+||++ +|+.++|. +... .
T Consensus 159 ~~l~~~i~~~--------~~~~v~~~~~~~~---~-~~~---l~~l~~l~~~~~~~li~De~~~~~~~~~~~-~~~~--~ 220 (420)
T 3gbx_A 159 DEMAKLAKEH--------KPKMIIGGFSAYS---G-VVD---WAKMREIADSIGAYLFVDMAHVAGLIAAGV-YPNP--V 220 (420)
T ss_dssp HHHHHHHHHH--------CCSEEEECCTTCC---S-CCC---HHHHHHHHHHTTCEEEEECTTTHHHHHTTS-SCCS--T
T ss_pred HHHHHHHHhc--------CCeEEEEecCccC---C-ccC---HHHHHHHHHHcCCEEEEECCcchhceeccc-CCcc--c
Confidence 4566666653 46778885 4432 2 222 889999999999999999996 56666664 2221 2
Q ss_pred CCCCCcCEEEee--cC
Q psy1628 101 GDDIIPDIVTVV--WN 114 (114)
Q Consensus 101 g~~v~PDivt~g--K~ 114 (114)
. .+|+++.+ |+
T Consensus 221 ~---~~di~~~s~sK~ 233 (420)
T 3gbx_A 221 P---HAHVVTTTTHKT 233 (420)
T ss_dssp T---TSSEEEEESSGG
T ss_pred c---cCCEEEeecccC
Confidence 2 38999954 74
No 108
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=98.00 E-value=1.2e-05 Score=61.99 Aligned_cols=72 Identities=8% Similarity=-0.073 Sum_probs=50.4
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHH------hCCeEEEccccccccccCccch-hhhhcCCCCCcCEEEee
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRA------AGGVCVADEVQVGFGRVGTHWW-AFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~------~gillI~DEV~tGfgRtG~~~~-~~~~~g~~v~PDivt~g 112 (114)
.++.++++...+...|.. .+.+.++++.++|++ ||+++|.||++++|.+.|.... ..+.++ ....+.+++
T Consensus 171 ~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~i~~~s~s 247 (398)
T 3ele_A 171 AHTRGVIINSPNNPSGTV-YSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVTKYYD--NTLVCYSYS 247 (398)
T ss_dssp TTEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGGGTCS--SEEEEEEST
T ss_pred cCCCEEEEcCCCCCCCCC-CCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChHhhcC--CeEEEEehh
Confidence 467788886545555654 466679999999999 9999999999999988774111 122333 445555677
Q ss_pred cC
Q psy1628 113 WN 114 (114)
Q Consensus 113 K~ 114 (114)
|+
T Consensus 248 K~ 249 (398)
T 3ele_A 248 KS 249 (398)
T ss_dssp TT
T ss_pred hc
Confidence 74
No 109
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=98.00 E-value=1.7e-05 Score=60.08 Aligned_cols=70 Identities=13% Similarity=-0.040 Sum_probs=50.6
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
+.+++.+.+ +++.++++++.+...|...+ ++++.++|++||+++|.||+++.. ... +....
T Consensus 117 ~~l~~~i~~--------~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~~~-~~~---~~~~~--- 177 (384)
T 3zrp_A 117 GEVEEEVRK--------SEYKLVALTHVETSTGVREP----VKDVINKIRKYVELIVVDGVSSVG-AEE---VKAEE--- 177 (384)
T ss_dssp HHHHHHHHH--------SCEEEEEEESEETTTTEECC----HHHHHHHHGGGEEEEEEECTTTTT-TSC---CCTTT---
T ss_pred HHHHHHHHh--------CCCcEEEEeCCCCCCceECc----HHHHHHHHHhcCCEEEEECccccc-Ccc---ccccc---
Confidence 355666654 36889999998887787665 889999999999999999998732 111 11222
Q ss_pred CCCcCEEEee
Q psy1628 103 DIIPDIVTVV 112 (114)
Q Consensus 103 ~v~PDivt~g 112 (114)
..+|+++.+
T Consensus 178 -~~~d~~~~s 186 (384)
T 3zrp_A 178 -WNVDVYLTA 186 (384)
T ss_dssp -TTCSEEEEE
T ss_pred -cCCCEEEec
Confidence 347888877
No 110
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=97.99 E-value=1.4e-05 Score=62.95 Aligned_cols=62 Identities=16% Similarity=0.071 Sum_probs=47.8
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEE--eec
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVT--VVW 113 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt--~gK 113 (114)
.++.++++|+..+..|.+.+ ++++.++|++||+++|+||++++++.... ... ..+|+++ ++|
T Consensus 139 ~~~~~v~~~~~~n~~G~~~~----l~~i~~l~~~~~~~li~D~~~~~~~~~~~------~~~--~~~di~~~S~~K 202 (412)
T 2cb1_A 139 AKTRAVFVETVANPALLVPD----LEALATLAEEAGVALVVDNTFGAAGALCR------PLA--WGAHVVVESLTK 202 (412)
T ss_dssp TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHTCEEEEECGGGTTTTSCC------GGG--GTCSEEEEETTT
T ss_pred cCCeEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEECCCccccccCC------ccc--cCCeEEEECCcc
Confidence 47899999998887777664 89999999999999999999997632222 122 4578888 555
No 111
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=97.99 E-value=7.4e-06 Score=62.84 Aligned_cols=61 Identities=20% Similarity=0.193 Sum_probs=47.0
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEee--c
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVV--W 113 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~g--K 113 (114)
++.++++++.+...|...+ ++++.++|+++|+++|+||+++ +|.... .. .. ..+|+++.+ |
T Consensus 159 ~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~g~~~~---~~--~~--~~~di~~~s~sK 221 (393)
T 1vjo_A 159 RPAILALVHAETSTGARQP----LEGVGELCREFGTLLLVDTVTS-LGGVPI---FL--DA--WGVDLAYSCSQK 221 (393)
T ss_dssp CCSEEEEESEETTTTEECC----CTTHHHHHHHHTCEEEEECTTT-TTTSCC---CT--TT--TTCSEEECCSSS
T ss_pred CceEEEEeccCCCcceecc----HHHHHHHHHHcCCEEEEECCcc-ccCcCC---cc--cc--cCccEEEEcCcc
Confidence 4568889888777777654 6899999999999999999999 765432 22 23 568999877 7
No 112
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=97.99 E-value=2.4e-05 Score=60.45 Aligned_cols=61 Identities=10% Similarity=0.076 Sum_probs=47.2
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEee
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~g 112 (114)
.++.++++++.++..|...+ ++++.++|++||+++|+||+++ +|.... ..+.+ .+|+++++
T Consensus 164 ~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~~~---~~~~~----~~d~~~~s 224 (416)
T 1qz9_A 164 QDTAVVMLTHVNYKTGYMHD----MQALTALSHECGALAIWDLAHS-AGAVPV---DLHQA----GADYAIGC 224 (416)
T ss_dssp TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHHTCEEEEECTTT-TTTSCC---CHHHH----TCSEEEEC
T ss_pred CCceEEEEeccccCcccccC----HHHHHHHHHHcCCEEEEEcccc-ccCcCC---Chhhc----CCCEEEec
Confidence 47889999999888787665 7999999999999999999997 444332 23333 37888875
No 113
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=97.98 E-value=2.4e-05 Score=60.78 Aligned_cols=82 Identities=12% Similarity=0.127 Sum_probs=52.5
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEE-cccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc--cchhhhh
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFA-ESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT--HWWAFQL 99 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAvii-EPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~--~~~~~~~ 99 (114)
+.+++.++++. .+...+++ .| +...| ...+.+.++++.++|++||+++|.||+..+|+..+. ..++...
T Consensus 171 ~~l~~~l~~~~------~~~~~i~~~~p-~NPtG-~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~ 242 (409)
T 4eu1_A 171 AGMLECLDKAP------EGSVILVHACA-HNPTG-VDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRH 242 (409)
T ss_dssp HHHHHHHHHSC------TTCEEEEESSS-CTTTC-CCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHH
T ss_pred HHHHHHHHhCC------CCcEEEEECCC-CCCCC-CCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHH
Confidence 35566666531 34444443 44 33334 556778899999999999999999999999976651 0123332
Q ss_pred -cCCCCCcCEE---EeecC
Q psy1628 100 -QGDDIIPDIV---TVVWN 114 (114)
Q Consensus 100 -~g~~v~PDiv---t~gK~ 114 (114)
.+ ..++++ +++|+
T Consensus 243 ~~~--~~~~~i~~~S~SK~ 259 (409)
T 4eu1_A 243 LVD--MVPNLIVAQSFSKN 259 (409)
T ss_dssp HHT--TSSCCEEEEECTTT
T ss_pred HHh--hCCcEEEEecCccc
Confidence 24 566765 55663
No 114
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=97.98 E-value=2.1e-05 Score=59.69 Aligned_cols=73 Identities=15% Similarity=0.016 Sum_probs=52.4
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
+.+++.+++. .+++++++++.++..|...+ ++++.++|++||+++|+||+++.+ ... +....
T Consensus 135 ~~l~~~l~~~-------~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~~~-~~~---~~~~~--- 196 (386)
T 2dr1_A 135 EDLDDALRKN-------PDVEAVTITYNETSTGVLNP----LPELAKVAKEHDKLVFVDAVSAMG-GAD---IKFDK--- 196 (386)
T ss_dssp HHHHHHHHHC-------TTCCEEEEESEETTTTEECC----HHHHHHHHHHTTCEEEEECTTTBT-TBC---CCTTT---
T ss_pred HHHHHHHhcC-------CCCcEEEEEeecCCcchhCC----HHHHHHHHHHcCCeEEEEcccccc-Ccc---ccccc---
Confidence 3456666543 47889999988877777654 799999999999999999998733 221 22222
Q ss_pred CCCcCEEEee--cC
Q psy1628 103 DIIPDIVTVV--WN 114 (114)
Q Consensus 103 ~v~PDivt~g--K~ 114 (114)
..+|+++.+ |.
T Consensus 197 -~~~di~~~s~sK~ 209 (386)
T 2dr1_A 197 -WGLDVVFSSSQKA 209 (386)
T ss_dssp -TTCSEEEEETTST
T ss_pred -cCCcEEEEecccc
Confidence 346999888 73
No 115
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=97.96 E-value=2.8e-05 Score=60.81 Aligned_cols=62 Identities=11% Similarity=0.082 Sum_probs=46.4
Q ss_pred HHHHHHHHhcCCCCCCCCceEE-EEEcccCCCCCcccCCHHHHHHHHHHHHH-----hCCeEEEccccccccccCc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCA-FFAESLQSCGGQIIPPANYLREVYKHVRA-----AGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAA-viiEPv~g~gG~~~~~~~fl~~lr~lc~~-----~gillI~DEV~tGfgRtG~ 92 (114)
+.+++.++++. .+..+ ++..| +...|. ..+.++++++.++|++ ||+++|.||++++|.+.|.
T Consensus 177 ~~l~~~l~~~~------~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~ 244 (430)
T 2x5f_A 177 DSLVEALQSYN------KDKVIMILNYP-NNPTGY-TPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDV 244 (430)
T ss_dssp HHHHHHHHHCC------SSEEEEEECSS-CTTTCC-CCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSS
T ss_pred HHHHHHHHhcC------CCCEEEEEcCC-CCCCCC-cCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcc
Confidence 34566666541 35544 55666 554564 5688999999999999 9999999999999977764
No 116
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=97.96 E-value=2.2e-05 Score=59.84 Aligned_cols=62 Identities=15% Similarity=-0.008 Sum_probs=47.5
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEE--eec
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVT--VVW 113 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt--~gK 113 (114)
.+++++++++.++..|...+ ++++.++|++||+++|+||+++. |+.. +.... ..+|+++ ++|
T Consensus 163 ~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~~~~~-g~~~---~~~~~----~~~d~~~~s~~K 226 (406)
T 1kmj_A 163 EKTRLLAITHVSNVLGTENP----LAEMITLAHQHGAKVLVDGAQAV-MHHP---VDVQA----LDCDFYVFSGHK 226 (406)
T ss_dssp TTEEEEEEESBCTTTCCBCC----HHHHHHHHHHTTCEEEEECTTTT-TTSC---CCHHH----HTCSEEEEEGGG
T ss_pred cCCeEEEEeCCCccccCcCC----HHHHHHHHHHcCCEEEEEchhhc-CCCC---Ccccc----cCCCEEEEEchh
Confidence 47899999999888887766 89999999999999999999974 3332 22222 3478876 556
No 117
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=97.96 E-value=8.8e-06 Score=62.76 Aligned_cols=71 Identities=14% Similarity=0.023 Sum_probs=47.3
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEc-ccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccc-ccccccCccchhhhhc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAE-SLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQ-VGFGRVGTHWWAFQLQ 100 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiE-Pv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~-tGfgRtG~~~~~~~~~ 100 (114)
+.+++.+.+. ++++++++ |..+ ....+++++++|++||+++|+||+| +|+.+.|. .+.. .
T Consensus 162 ~~l~~~i~~~--------~~~~v~~~~~~~~-------~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~-~~~~--~ 223 (425)
T 3ecd_A 162 DQVEALAQQH--------KPSLIIAGFSAYP-------RKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGR-HANP--V 223 (425)
T ss_dssp HHHHHHHHHH--------CCSEEEEECSCCC-------SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTS-SCCG--G
T ss_pred HHHHHHHhhc--------CCcEEEEccccCC-------CcCCHHHHHHHHHHcCCEEEEECcChHhhhhccc-ccCc--h
Confidence 3566666543 45788887 4332 3456799999999999999999995 66655554 3221 1
Q ss_pred CCCCCcCEEEee--cC
Q psy1628 101 GDDIIPDIVTVV--WN 114 (114)
Q Consensus 101 g~~v~PDivt~g--K~ 114 (114)
. .+|+++.+ |+
T Consensus 224 ~---~~di~~~s~sK~ 236 (425)
T 3ecd_A 224 E---HAHVVTSTTHKT 236 (425)
T ss_dssp G---TCSEEEEESSGG
T ss_pred h---cCcEEEecCCcc
Confidence 1 25887665 73
No 118
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=97.94 E-value=9.6e-06 Score=61.71 Aligned_cols=69 Identities=9% Similarity=-0.094 Sum_probs=48.5
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcC----EEEeecC
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPD----IVTVVWN 114 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PD----ivt~gK~ 114 (114)
.++.+++++..+...|.. .+.+.++++.++|++ |+++|+||++++|.+ |. .++..... ..+| +.+++|.
T Consensus 154 ~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~~~-~~~li~De~~~~~~~-~~-~~~~~~~~--~~~~~~i~~~s~sK~ 226 (363)
T 3ffh_A 154 EKTTIVWICNPNNPTGNY-IELADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQ-PEKHEKLV--RTYKNLIITRTFSKI 226 (363)
T ss_dssp TTEEEEEEESSCTTTCCC-CCHHHHHHHHTTSCT-TSEEEEECTTGGGCS-SC-CCCCGGGG--GTCTTEEEEEESSST
T ss_pred cCCCEEEEeCCCCCcCCC-cCHHHHHHHHHhCCC-CcEEEEeCchHhhcC-cc-ccCHHHHh--hcCCCEEEEeechhh
Confidence 468888887666666754 466677777777777 999999999999987 65 44433332 3345 5566774
No 119
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=97.92 E-value=2.3e-05 Score=61.00 Aligned_cols=49 Identities=12% Similarity=0.052 Sum_probs=37.2
Q ss_pred ceEEEEE-cccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccC
Q psy1628 41 YPCAFFA-ESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVG 91 (114)
Q Consensus 41 ~iAAvii-EPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG 91 (114)
++.++++ .| +...|. ..+.+.++++.++|++||+++|.||+++++...+
T Consensus 182 ~~~~v~l~~p-~nptG~-~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~ 231 (437)
T 3g0t_A 182 QFCSIIYSNP-NNPTWQ-CMTDEELRIIGELATKHDVIVIEDLAYFGMDFRK 231 (437)
T ss_dssp CCCEEEEESS-CTTTCC-CCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTS
T ss_pred CceEEEEeCC-CCCCCC-cCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCC
Confidence 4555544 66 444564 4567779999999999999999999999875544
No 120
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=97.92 E-value=1.2e-05 Score=63.08 Aligned_cols=73 Identities=7% Similarity=-0.175 Sum_probs=52.1
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHH-HhCCeEEEccccc--cccccCccchhh-------hhcCCCCCcCEE
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVR-AAGGVCVADEVQV--GFGRVGTHWWAF-------QLQGDDIIPDIV 109 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~-~~gillI~DEV~t--GfgRtG~~~~~~-------~~~g~~v~PDiv 109 (114)
.++.++++.|.+.+-.-...+.+.++++.++|+ +||+++|.||++. +|...|...... +..+ ...++.
T Consensus 177 ~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~ 254 (422)
T 3d6k_A 177 PQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPN--RFWFMS 254 (422)
T ss_dssp TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTT--CEEEEE
T ss_pred CCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCC--cEEEEc
Confidence 367888878887764335778999999999999 9999999999997 576555311122 1223 556677
Q ss_pred EeecC
Q psy1628 110 TVVWN 114 (114)
Q Consensus 110 t~gK~ 114 (114)
+++|.
T Consensus 255 S~SK~ 259 (422)
T 3d6k_A 255 STSKI 259 (422)
T ss_dssp ESTTT
T ss_pred Chhhh
Confidence 78884
No 121
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=97.91 E-value=4e-05 Score=58.80 Aligned_cols=61 Identities=16% Similarity=0.088 Sum_probs=47.2
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEee
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~g 112 (114)
.+++++++++.++..|...+ ++++.++|++||+++|+||+++. |... +....+ .+|+++.+
T Consensus 168 ~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~~-~~~~---~~~~~~----~~di~~~s 228 (420)
T 1t3i_A 168 EKTKLVTVVHISNTLGCVNP----AEEIAQLAHQAGAKVLVDACQSA-PHYP---LDVQLI----DCDWLVAS 228 (420)
T ss_dssp TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHTTCEEEEECTTTT-TTSC---CCHHHH----TCSEEEEE
T ss_pred CCceEEEEeCCcccccCcCC----HHHHHHHHHHcCCEEEEEhhhcc-CCcc---Cchhhc----CCCEEEEe
Confidence 47899999998887787766 89999999999999999999973 3332 123333 37999887
No 122
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=97.91 E-value=2.2e-05 Score=60.95 Aligned_cols=60 Identities=15% Similarity=0.161 Sum_probs=42.6
Q ss_pred HHHHHHHhcCCCCCCCCceEEEEEcccCCC-CCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccC
Q psy1628 24 FFERIFLSASLYPFLFLYPCAFFAESLQSC-GGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVG 91 (114)
Q Consensus 24 ~~e~~~~~~~~~~~~~~~iAAviiEPv~g~-gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG 91 (114)
.+++.+.++ ....++++-|.+.+ .| ...+.+.++++.++|++||+++|.||++.+|+..|
T Consensus 165 ~l~~~l~~~-------~~~~~~~~~~~p~nPtG-~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~ 225 (412)
T 1yaa_A 165 GFLNAIQKA-------PEGSIFVLHSCAHNPTG-LDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGD 225 (412)
T ss_dssp HHHHHHHHS-------CTTCEEEEECSSCTTTC-CCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSC
T ss_pred HHHHHHHhC-------CCCCEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHHCCCEEEEecccccccCCc
Confidence 455666553 12234444344333 45 46778899999999999999999999999997665
No 123
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=97.91 E-value=1.1e-05 Score=63.12 Aligned_cols=73 Identities=5% Similarity=-0.180 Sum_probs=51.1
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHH-HHhCCeEEEccccccc--cccCc---cchhhh----hcCCCCCcCEE
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHV-RAAGGVCVADEVQVGF--GRVGT---HWWAFQ----LQGDDIIPDIV 109 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc-~~~gillI~DEV~tGf--gRtG~---~~~~~~----~~g~~v~PDiv 109 (114)
.++.++++.|...+-.-...+.+.++++.++| ++||+++|.||+++++ +..+. .++... ..+ ...++.
T Consensus 179 ~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~--~~i~~~ 256 (427)
T 3ppl_A 179 PQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPN--RFWAFT 256 (427)
T ss_dssp TTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTT--SEEEEE
T ss_pred CCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCC--cEEEEe
Confidence 57889999997665433455666799999999 9999999999999984 43331 122221 223 556677
Q ss_pred EeecC
Q psy1628 110 TVVWN 114 (114)
Q Consensus 110 t~gK~ 114 (114)
+++|.
T Consensus 257 S~SK~ 261 (427)
T 3ppl_A 257 STSKI 261 (427)
T ss_dssp ESTTT
T ss_pred chhhc
Confidence 88884
No 124
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=97.89 E-value=3.9e-05 Score=57.24 Aligned_cols=60 Identities=15% Similarity=0.128 Sum_probs=44.5
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEee
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~g 112 (114)
++.+++++..+...|...+ ++++.++|++||+++|+||++ ++++... ..+.++ +|+++++
T Consensus 124 ~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~D~a~-~~~~~~~---~~~~~~----~d~~~~s 183 (353)
T 2yrr_A 124 RYRMVALVHGETSTGVLNP----AEAIGALAKEAGALFFLDAVT-TLGMLPF---SMRAMG----VDYAFTG 183 (353)
T ss_dssp CCSEEEEESEETTTTEECC----HHHHHHHHHHHTCEEEEECTT-TTTTSCC---CHHHHT----CSEEECC
T ss_pred CCCEEEEEccCCCcceecC----HHHHHHHHHHcCCeEEEEcCc-ccccccc---cccccC----ceEEEec
Confidence 5667888888777776655 779999999999999999999 5765432 233333 5888763
No 125
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=97.89 E-value=1.8e-05 Score=60.85 Aligned_cols=70 Identities=16% Similarity=0.057 Sum_probs=46.6
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEE-cccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccc-ccccCccchhhhhc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFA-ESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVG-FGRVGTHWWAFQLQ 100 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAvii-EPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tG-fgRtG~~~~~~~~~ 100 (114)
+.+++.+++. +++++++ +|..+ ...+ ++++.++|++||+++|+||++++ +...|. ... ..
T Consensus 153 ~~l~~~l~~~--------~~~~v~~~~p~~~----~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~-~~~--~~ 214 (407)
T 2dkj_A 153 EEVRRLALEH--------RPKVIVAGASAYP----RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGL-HPN--PL 214 (407)
T ss_dssp HHHHHHHHHH--------CCSEEEECCSSCC----SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTC-SCC--CT
T ss_pred HHHHHHHhhc--------CCeEEEEeccccC----CCCC---HHHHHHHHHHcCCEEEEEccccccccccCc-cCC--cc
Confidence 3556666542 4567777 67654 2222 89999999999999999999986 544554 221 11
Q ss_pred CCCCCcCEE--Eeec
Q psy1628 101 GDDIIPDIV--TVVW 113 (114)
Q Consensus 101 g~~v~PDiv--t~gK 113 (114)
. .+|++ +++|
T Consensus 215 ~---~~di~~~s~sK 226 (407)
T 2dkj_A 215 P---YAHVVTSTTHK 226 (407)
T ss_dssp T---TCSEEEEESSG
T ss_pred c---cccEEEEeccc
Confidence 2 26888 5677
No 126
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=97.88 E-value=1.1e-05 Score=61.03 Aligned_cols=46 Identities=15% Similarity=0.069 Sum_probs=39.7
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
++++++++++.++..|....+.+.++++.++|++||+++|+||.+.
T Consensus 136 ~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~ 181 (359)
T 3pj0_A 136 EPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARL 181 (359)
T ss_dssp SCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTC
T ss_pred CCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcch
Confidence 5789999998876554467788999999999999999999999875
No 127
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=97.86 E-value=3.7e-05 Score=58.41 Aligned_cols=62 Identities=19% Similarity=0.128 Sum_probs=48.4
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHH----HhCCeEEEccccccccccCccchhhhhcCCCCCcCEEE--eec
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVR----AAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVT--VVW 113 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~----~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt--~gK 113 (114)
.+++++++++.+...|...+ ++++.++|+ ++|+++|+||+++ +|.... .. .. ..+|+++ ++|
T Consensus 153 ~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~~~li~Dea~~-~g~~~~---~~--~~--~~~d~~~~s~~K 220 (390)
T 1elu_A 153 PKTRLVILSHLLWNTGQVLP----LAEIMAVCRRHQGNYPVRVLVDGAQS-AGSLPL---DF--SR--LEVDYYAFTGHK 220 (390)
T ss_dssp TTEEEEEEESBCTTTCCBCC----HHHHHHHHHHCCSSSCCEEEEECTTT-BTTBCC---CT--TT--SCCSEEEEESSS
T ss_pred CCceEEEEeccccCCceecC----HHHHHHHHhhhhhhcCcEEEEEcccc-cCCcCC---Ch--hh--cCCCEEEccccc
Confidence 57899999998887787766 899999999 9999999999997 554432 12 12 4679888 666
No 128
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=97.85 E-value=2.2e-05 Score=63.57 Aligned_cols=44 Identities=18% Similarity=0.176 Sum_probs=38.9
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGF 87 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGf 87 (114)
.++++++++..+...|...+ +++|+++|++||+++|+||+++||
T Consensus 238 ~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~i~livDea~~~~ 281 (514)
T 3mad_A 238 PNTVVVAGSAPGYPHGVVDP----IPEIAALAAEHGIGCHVDACLGGF 281 (514)
T ss_dssp TTEEEEEEETTCTTTCCCCC----HHHHHHHHHHHTCEEEEECTTTTT
T ss_pred cCCEEEEEeCCCCCCccccC----HHHHHHHHHHhCCeEEEecccccc
Confidence 47889999998877787654 799999999999999999999987
No 129
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=97.85 E-value=6.4e-05 Score=56.82 Aligned_cols=62 Identities=16% Similarity=0.213 Sum_probs=47.7
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC--CeEEEccccccccccCccchhhhhcCCCCCcCEEEee--c
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAG--GVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVV--W 113 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~g--illI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~g--K 113 (114)
.++.++++++.+...|...+ ++++.++|++|| +++|.||+++ |+... +..+ . ..+|+++.+ |
T Consensus 138 ~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~li~Dea~~-~~~~~---~~~~--~--~~~di~~~s~sK 203 (384)
T 1eg5_A 138 EDTFLVSIMAANNEVGTIQP----VEDVTRIVKKKNKETLVHVDAVQT-IGKIP---FSLE--K--LEVDYASFSAHK 203 (384)
T ss_dssp TTEEEEEEESBCTTTCBBCC----HHHHHHHHHHHCTTCEEEEECTTT-TTTSC---CCCT--T--TCCSEEEEEGGG
T ss_pred CCCeEEEEECCCCCcccccC----HHHHHHHHHhcCCceEEEEEhhhh-cCCcc---cCch--h--cCCCEEEecHHH
Confidence 47889999988777776665 699999999999 9999999997 65432 1222 2 357999988 7
No 130
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=97.85 E-value=4.1e-05 Score=59.40 Aligned_cols=51 Identities=14% Similarity=0.048 Sum_probs=40.1
Q ss_pred ceEEEEEc-ccCCCCCcccCCHHHHHHHHHHHH------HhCCeEEEccccccccccCc
Q psy1628 41 YPCAFFAE-SLQSCGGQIIPPANYLREVYKHVR------AAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 41 ~iAAviiE-Pv~g~gG~~~~~~~fl~~lr~lc~------~~gillI~DEV~tGfgRtG~ 92 (114)
.-++++++ |.+...|.. .+.+.++++.++|+ +||+++|.||+.++|+++|.
T Consensus 178 ~~~~vi~~~p~~NPtG~~-~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~ 235 (413)
T 3t18_A 178 DRIASLINSPGNNPTGYS-LSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGD 235 (413)
T ss_dssp SEEEEEEECSSCTTTCCC-CCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSS
T ss_pred CCEEEEEeCCCCCCCCCC-CCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChh
Confidence 34567776 535555654 45666999999999 89999999999999998875
No 131
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=97.85 E-value=2.8e-05 Score=59.87 Aligned_cols=72 Identities=14% Similarity=0.103 Sum_probs=43.9
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc-cccccCccchhhhhcC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV-GFGRVGTHWWAFQLQG 101 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfgRtG~~~~~~~~~g 101 (114)
+.+++.+.+. ++.++++.+ ++.|...+ +++++++|++||+++|.||+++ |+...|. ...
T Consensus 154 ~~l~~~i~~~--------~~~~v~~~~--~~~G~~~~----l~~i~~l~~~~~~~li~Dea~~~g~~~~~~------~~~ 213 (417)
T 3n0l_A 154 EKVREIAKKE--------KPKLIVCGA--SAYARVID----FAKFREIADEIGAYLFADIAHIAGLVVAGE------HPS 213 (417)
T ss_dssp HHHHHHHHHH--------CCSEEEECC--SSCCSCCC----HHHHHHHHHHHTCEEEEECTTTHHHHHTTS------SCC
T ss_pred HHHHHHHHhc--------CCeEEEECC--cccCccCC----HHHHHHHHHHcCCEEEEECccchhhhhccc------CCC
Confidence 3566666542 445666433 33465444 8999999999999999999974 3322221 111
Q ss_pred CCCCcCEEEee--cC
Q psy1628 102 DDIIPDIVTVV--WN 114 (114)
Q Consensus 102 ~~v~PDivt~g--K~ 114 (114)
.--..|+++.+ |+
T Consensus 214 ~~~~~di~~~s~sK~ 228 (417)
T 3n0l_A 214 PFPYAHVVSSTTHKT 228 (417)
T ss_dssp CTTTCSEEEEESSTT
T ss_pred ccccceEEEeeCccc
Confidence 00024899888 74
No 132
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=97.84 E-value=3.8e-05 Score=60.10 Aligned_cols=51 Identities=14% Similarity=0.116 Sum_probs=39.5
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
++.++++...+...|. ..+.+.++++.++|++||+++|+||++++|...+.
T Consensus 198 ~~~~v~l~~p~NPtG~-~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~ 248 (432)
T 3ei9_A 198 RTDIIFFCSPNNPTGA-AATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDN 248 (432)
T ss_dssp CCSEEEEESSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSC
T ss_pred CCCEEEEeCCCCCCCC-CCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCC
Confidence 5667777644444454 55777899999999999999999999999865544
No 133
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=97.84 E-value=1.5e-05 Score=63.75 Aligned_cols=42 Identities=24% Similarity=0.223 Sum_probs=36.9
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
.+++++++|+.++..|...+ +++++++|+++|+++|+||+++
T Consensus 165 ~~t~~v~le~p~NptG~~~~----l~~i~~la~~~g~~livDe~~~ 206 (414)
T 3ndn_A 165 VPTQAVFFETPSNPMQSLVD----IAAVTELAHAAGAKVVLDNVFA 206 (414)
T ss_dssp SCCSEEEEESSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTT
T ss_pred CCCeEEEEECCCCCCCcccc----HHHHHHHHHHcCCEEEEECCCc
Confidence 46789999999888786643 8899999999999999999987
No 134
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=97.84 E-value=3.9e-05 Score=60.04 Aligned_cols=61 Identities=13% Similarity=-0.004 Sum_probs=46.9
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEE--eec
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVT--VVW 113 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt--~gK 113 (114)
.+++++++|+..+..|...+ ++++.++|+++|+++|+||+++++. .+. ..+ ..+|+++ ++|
T Consensus 143 ~~~~~v~~~~~~nptG~~~~----l~~i~~~~~~~~~~livD~~~~~~~-~~~------~~~--~~~di~~~S~sK 205 (389)
T 3acz_A 143 PNTKMVYLESPANPTCKVSD----IKGIAVVCHERGARLVVDATFTSPC-FLK------PLE--LGADIALHSVSK 205 (389)
T ss_dssp TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHTCEEEEECTTTCTT-TCC------GGG--TTCSEEEEETTT
T ss_pred CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCcccc-ccC------ccc--cCCeEEEECChh
Confidence 57899999998887777664 8999999999999999999998652 122 122 4578884 556
No 135
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=97.83 E-value=4e-05 Score=58.87 Aligned_cols=69 Identities=16% Similarity=0.116 Sum_probs=48.5
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhh-hhcCCCCCcCEEEeecC
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAF-QLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~-~~~g~~v~PDivt~gK~ 114 (114)
++.++++...+...|.. .+.+.++++.++|+ +|+++|+||++++|++... ++.. +.++ ....+.+++|.
T Consensus 146 ~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~~-~~~~li~De~~~~~~~~~~-~~~~~~~~~--~~i~~~s~sK~ 215 (356)
T 1fg7_A 146 GVKVVYVCSPNNPTGQL-INPQDFRTLLELTR-GKAIVVADEAYIEFCPQAS-LAGWLAEYP--HLAILRTLSKA 215 (356)
T ss_dssp TEEEEEEESSCTTTCCC-CCHHHHHHHHHHHT-TTCEEEEECTTGGGSGGGC-SGGGTTTCT--TEEEEEESSST
T ss_pred CCCEEEEeCCCCCCCCC-CCHHHHHHHHHhCC-CCCEEEEEccchhhcCCCc-HHHHHhhCC--CEEEEecchHh
Confidence 56777776555555654 57899999999999 9999999999999974333 3333 2233 33446677774
No 136
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=97.82 E-value=3.9e-05 Score=59.66 Aligned_cols=71 Identities=6% Similarity=0.005 Sum_probs=48.4
Q ss_pred ceEEEEEc-ccCCCCCcccCCHHHHHHHHHHHH------HhCCeEEEccccccccccCcc--chhhhhcCCCCCcCE---
Q psy1628 41 YPCAFFAE-SLQSCGGQIIPPANYLREVYKHVR------AAGGVCVADEVQVGFGRVGTH--WWAFQLQGDDIIPDI--- 108 (114)
Q Consensus 41 ~iAAviiE-Pv~g~gG~~~~~~~fl~~lr~lc~------~~gillI~DEV~tGfgRtG~~--~~~~~~~g~~v~PDi--- 108 (114)
..++++++ |.+...|. ..+.+.++++.++|+ +||+++|.||+.++|++.|.. .+.....+ +.+|+
T Consensus 179 ~~~~vi~~~p~~NPtG~-~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~--~~~~~~~i 255 (418)
T 3rq1_A 179 TNVVVIFNTPGNNPTGY-SIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAFFNKFSH--LPKEILTC 255 (418)
T ss_dssp SEEEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGGGGGGTT--CCTTEEEE
T ss_pred CCEEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHHHHHHHh--cCCCceEE
Confidence 34566666 53555564 456666999999999 899999999999999877641 12223334 66773
Q ss_pred E--EeecC
Q psy1628 109 V--TVVWN 114 (114)
Q Consensus 109 v--t~gK~ 114 (114)
+ +++|+
T Consensus 256 ~~~S~sK~ 263 (418)
T 3rq1_A 256 VCYSLSKG 263 (418)
T ss_dssp EEEESTTT
T ss_pred EEEeCCCC
Confidence 2 56773
No 137
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=97.82 E-value=2.6e-05 Score=58.94 Aligned_cols=61 Identities=15% Similarity=0.115 Sum_probs=44.8
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
+.+++.+.++ .++.+++++..+...|.. .+.+.++++.++| ++|+++|+||++++|.+.+.
T Consensus 130 ~~l~~~l~~~-------~~~~~v~l~~p~nptG~~-~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~ 190 (354)
T 3ly1_A 130 EGLKAAVAAY-------SGPSIVYLVNPNNPTGTI-TPADVIEPWIASK-PANTMFIVDEAYAEFVNDPR 190 (354)
T ss_dssp HHHHHHHHTC-------SSCEEEEEESSCTTTCCC-CCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTT
T ss_pred HHHHHHhccC-------CCCCEEEEeCCCCCcCCC-cCHHHHHHHHHhC-CCCeEEEEeccHHHhccccc
Confidence 4556666543 367777776555555654 4666788888888 89999999999999987764
No 138
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=97.81 E-value=9.1e-05 Score=57.94 Aligned_cols=62 Identities=15% Similarity=-0.057 Sum_probs=47.8
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVG 91 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG 91 (114)
+.+++.++++ + .+..++++...+...|. ..+.+.++++.++|++||+++|.||+..+|...+
T Consensus 183 ~~l~~~l~~~---~---~~~~~v~i~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~ 244 (420)
T 4f4e_A 183 DGMLAALNGY---E---PGTIVVLHACCHNPTGV-DLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESI 244 (420)
T ss_dssp HHHHHHHTTC---C---TTCEEEEECSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCT
T ss_pred HHHHHHHHhC---C---CCCEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHHCCcEEEEccccccccCCc
Confidence 3456666543 1 46777777777666665 4577889999999999999999999999997654
No 139
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=97.81 E-value=2.9e-05 Score=59.63 Aligned_cols=72 Identities=11% Similarity=0.007 Sum_probs=45.6
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
+.+++.++++ +++++++.|. +.| ....+++++++|++||+++|+||+++ +|+++. .....+
T Consensus 153 ~~l~~~i~~~--------~~~~v~~~~~--~~~----~~~~l~~i~~l~~~~~~~li~Dea~~-~g~~~~---~~~~~~- 213 (405)
T 2vi8_A 153 DDVREKARLH--------RPKLIVAAAA--AYP----RIIDFAKFREIADEVGAYLMVDMAHI-AGLVAA---GLHPNP- 213 (405)
T ss_dssp HHHHHHHHHH--------CCSEEEECCS--SCC----SCCCHHHHHHHHHHHTCEEEEECTTT-HHHHHT---TSSCCS-
T ss_pred HHHHHHHHhc--------CCeEEEEeCC--CCC----ccCCHHHHHHHHHHcCCEEEEEcccc-cccccc---CcCCCc-
Confidence 3456666542 3466777542 222 22248999999999999999999999 555543 111122
Q ss_pred CC-CcCEE--EeecC
Q psy1628 103 DI-IPDIV--TVVWN 114 (114)
Q Consensus 103 ~v-~PDiv--t~gK~ 114 (114)
+ .+|++ +++|.
T Consensus 214 -~~~~di~~~s~sK~ 227 (405)
T 2vi8_A 214 -VPYAHFVTTTTHKT 227 (405)
T ss_dssp -TTTCSEEEEESSST
T ss_pred -cccCCEEEEecccc
Confidence 2 57887 56773
No 140
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=97.81 E-value=7.7e-05 Score=60.63 Aligned_cols=65 Identities=22% Similarity=0.102 Sum_probs=50.6
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCC-CcCEEEe
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDI-IPDIVTV 111 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v-~PDivt~ 111 (114)
.+++++++.......|.+.+ ++++.++|++||+++++|++++|+..... .+.+...+ + .+|++++
T Consensus 258 ~~~~~Vv~~~~~n~tG~i~~----l~~I~~la~~~g~~l~vD~a~~~~~~~~~-~~~~~~~g--~~~aD~v~~ 323 (515)
T 2jis_A 258 AVPFLVSATSGTTVLGAFDP----LEAIADVCQRHGLWLHVDAAWGGSVLLSQ-THRHLLDG--IQRADSVAW 323 (515)
T ss_dssp CEEEEEEEEBSCTTTCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGGCT-TTGGGGTT--GGGCSEEEE
T ss_pred CCcEEEEEeCCCCCCCCccC----HHHHHHHHHHcCCeEEEehhhhhHHHhCh-hhHhhcCC--CccCCEEEE
Confidence 36889999877666676654 88999999999999999999999876554 34444445 5 7899988
No 141
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=97.79 E-value=1.1e-05 Score=61.88 Aligned_cols=70 Identities=14% Similarity=0.029 Sum_probs=49.1
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
+.+++.+++ .++.++++++.++..|...+ ++++.++|++||+++|+||+++. +.. .+..+.+
T Consensus 128 ~~l~~~i~~--------~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~~-~~~---~~~~~~~-- 189 (411)
T 3nnk_A 128 DQVEDAVKR--------IRPRLLLTVQGDTSTTMLQP----LAELGEICRRYDALFYTDATASL-GGN---PLETDVW-- 189 (411)
T ss_dssp HHHHHHHHH--------HCCSEEEEESEETTTTEECC----CTTHHHHHHHHTCEEEEECTTTB-TTB---CCCTTTT--
T ss_pred HHHHHHHhh--------CCCeEEEEeCCCCCcceecc----HHHHHHHHHHcCCEEEEECCccc-CCc---ccchhcc--
Confidence 345556654 26788999998887787755 77999999999999999999763 221 1223333
Q ss_pred CCCcCEEEee
Q psy1628 103 DIIPDIVTVV 112 (114)
Q Consensus 103 ~v~PDivt~g 112 (114)
.+|+++.+
T Consensus 190 --~~d~~~~s 197 (411)
T 3nnk_A 190 --GLDAVSAG 197 (411)
T ss_dssp --TCSEEECC
T ss_pred --CCcEEEec
Confidence 35777765
No 142
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=97.78 E-value=7.1e-05 Score=57.15 Aligned_cols=71 Identities=17% Similarity=0.102 Sum_probs=49.5
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
+.+++.+++. .++.++++++.+...|...+ ++++.++|++||+++|.||+++ +|... +..+.
T Consensus 123 ~~l~~~l~~~-------~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~~---~~~~~--- 184 (392)
T 2z9v_A 123 QAVADMLKAH-------PEITVVSVCHHDTPSGTINP----IDAIGALVSAHGAYLIVDAVSS-FGGMK---THPED--- 184 (392)
T ss_dssp HHHHHHHHHC-------TTCCEEEEESEEGGGTEECC----HHHHHHHHHHTTCEEEEECTTT-BTTBS---CCGGG---
T ss_pred HHHHHHHhcC-------CCCcEEEEeccCCCCceecc----HHHHHHHHHHcCCeEEEEcccc-cCCcc---ccccc---
Confidence 3455566542 36778999888776676654 7899999999999999999997 43222 12222
Q ss_pred CCCcCEEEee
Q psy1628 103 DIIPDIVTVV 112 (114)
Q Consensus 103 ~v~PDivt~g 112 (114)
..+|+++.+
T Consensus 185 -~~~d~~~~s 193 (392)
T 2z9v_A 185 -CKADIYVTG 193 (392)
T ss_dssp -GTCSEEEEC
T ss_pred -ccceEEEec
Confidence 346888764
No 143
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=97.77 E-value=5.9e-05 Score=58.75 Aligned_cols=44 Identities=11% Similarity=0.082 Sum_probs=38.4
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGF 87 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGf 87 (114)
.+++++++++..+..|.+.+ ++++.++|++||+++|+||+++.+
T Consensus 148 ~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~De~~~~~ 191 (398)
T 2rfv_A 148 PETKVVYIETPANPTLSLVD----IETVAGIAHQQGALLVVDNTFMSP 191 (398)
T ss_dssp TTEEEEEEESSBTTTTBCCC----HHHHHHHHHHTTCEEEEECTTTCT
T ss_pred CCCeEEEEECCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCccc
Confidence 47899999998887787764 899999999999999999999843
No 144
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=97.74 E-value=9.3e-05 Score=56.72 Aligned_cols=61 Identities=11% Similarity=0.007 Sum_probs=44.5
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccccccc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRV 90 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRt 90 (114)
+.+++.++++. .+..++++...+...|. ..+.+.++++.++|++||+++|.||+.++|...
T Consensus 161 ~~l~~~l~~~~------~~~~~v~~~~p~nptG~-~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~ 221 (397)
T 3fsl_A 161 NDLLATLKTLQ------AGSIVLLHPCCHNPTGA-DLTNDQWDAVIEILKARELIPFLDIAYQGFGAG 221 (397)
T ss_dssp HHHHHHHTTCC------TTCEEEECSSSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSC
T ss_pred HHHHHHHHhCC------CCCEEEEeCCCCCCCCc-CCCHHHHHHHHHHHHhCCEEEEEecCchhhccC
Confidence 34556665531 35566665555554564 567778999999999999999999999999765
No 145
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=97.73 E-value=3.9e-05 Score=59.99 Aligned_cols=44 Identities=18% Similarity=0.110 Sum_probs=38.3
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGF 87 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGf 87 (114)
.+++++++|+..+..|...+ ++++.++|++||+++|+||+++.+
T Consensus 149 ~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~~~~~~ 192 (398)
T 1gc0_A 149 PATRVIYFESPANPNMHMAD----IAGVAKIARKHGATVVVDNTYCTP 192 (398)
T ss_dssp TTEEEEEEESSCTTTCCCCC----HHHHHHHHGGGTCEEEEECTTTHH
T ss_pred CCCeEEEEECCCCCCccccc----HHHHHHHHHHcCCEEEEECCCccc
Confidence 57899999998877776653 899999999999999999999854
No 146
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=97.72 E-value=0.00017 Score=54.56 Aligned_cols=75 Identities=8% Similarity=-0.053 Sum_probs=52.3
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
+.+++.++++. .. ++++++++++.+...|...+ ++++.++|++||+++|.||+++.+ ..+. ....++
T Consensus 133 ~~l~~~l~~~~-~~---~~~~~v~~~~~~nptG~~~~----~~~i~~~~~~~~~~li~D~a~~~~-~~~~---~~~~~~- 199 (371)
T 2e7j_A 133 ENFAQTIEETK-KR---GEVVLALITYPDGNYGNLPD----VKKIAKVCSEYDVPLLVNGAYAIG-RMPV---SLKEIG- 199 (371)
T ss_dssp HHHHHHHHHHT-TT---SCEEEEEEESSCTTTCCCCC----HHHHHHHHHTTTCCEEEECTTTBT-TBCC---CHHHHT-
T ss_pred HHHHHHHHhhc-cc---CCeEEEEEECCCCCCcccCC----HHHHHHHHHHcCCeEEEECccccC-CCCC---ChhhcC-
Confidence 35566666542 11 37888999999887787665 499999999999999999999864 3332 233333
Q ss_pred CCCcCEEEe--ec
Q psy1628 103 DIIPDIVTV--VW 113 (114)
Q Consensus 103 ~v~PDivt~--gK 113 (114)
+|+++. +|
T Consensus 200 ---~di~~~s~sK 209 (371)
T 2e7j_A 200 ---ADFIVGSGHK 209 (371)
T ss_dssp ---CSEEEEEHHH
T ss_pred ---CCEEEecCCc
Confidence 677765 55
No 147
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=97.72 E-value=0.00013 Score=58.89 Aligned_cols=65 Identities=15% Similarity=0.070 Sum_probs=48.7
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCC-CcCEEEe--ec
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDI-IPDIVTV--VW 113 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v-~PDivt~--gK 113 (114)
.+.++++.......|.. +.+++|.++|++||+++++||++.|+..... +.+...+ + .+|++++ .|
T Consensus 258 ~~~~vv~~~~~~~tG~~----~~l~~I~~l~~~~~~~l~vD~a~~~~~~~~~--~~~~~~g--i~~~D~i~~s~hK 325 (497)
T 2qma_A 258 IPFAIVGTAGTTDHGAI----DDLDFIADMAVKHDMWMHVDGAYGGALILSS--HKSRLKG--VERAHSISVDFHK 325 (497)
T ss_dssp EEEEEEEEBSCTTTCCB----CCHHHHHHHHHHHTCEEEEEETTGGGGGGST--TGGGGTT--GGGCSEEEEETTT
T ss_pred cceEEEEcCCCCCCCCC----CCHHHHHHHHHHcCCEEEEehhhhHHHHhCc--chHhhcC--cccCCEEEEcchh
Confidence 35677776665555653 4489999999999999999999999876553 3334445 6 7899988 56
No 148
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=97.70 E-value=4.5e-05 Score=57.24 Aligned_cols=45 Identities=9% Similarity=0.000 Sum_probs=39.1
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccc
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGF 87 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGf 87 (114)
++++++++|. .+.|. .++.++++++.++|++||+++|+||++..+
T Consensus 141 ~~~~v~~~~~-~~tG~-~~~~~~l~~i~~~~~~~~~~li~D~a~~~~ 185 (356)
T 1v72_A 141 QPACVSITQA-TEVGS-IYTLDEIEAIGDVCKSSSLGLHMDGSRFAN 185 (356)
T ss_dssp EEEEEEEESS-CTTSC-CCCHHHHHHHHHHHHHTTCEEEEEETTHHH
T ss_pred CceEEEEEcC-CCCCc-cCCHHHHHHHHHHHHHcCCeEEEEchhhHh
Confidence 7899999995 45675 568899999999999999999999998754
No 149
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=97.68 E-value=0.00016 Score=54.13 Aligned_cols=72 Identities=14% Similarity=0.133 Sum_probs=46.0
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGD 102 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~ 102 (114)
+.+++.++++ .++.++++.......|...+ ++++.++|++||+++|+||+++ ++.... ..+.
T Consensus 120 ~~l~~~l~~~-------~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~Dea~~-~~~~~~---~~~~--- 181 (366)
T 1m32_A 120 QAIDAILNAD-------PTISHIAMVHSETTTGMLNP----IDEVGALAHRYGKTYIVDAMSS-FGGIPM---DIAA--- 181 (366)
T ss_dssp HHHHHHHHHC-------TTCCEEEEESEETTTTEECC----HHHHHHHHHHHTCEEEEECTTT-TTTSCC---CTTT---
T ss_pred HHHHHHHhcC-------CCeEEEEEecccCCcceecC----HHHHHHHHHHcCCEEEEECCcc-ccCcCc---cccc---
Confidence 3456666653 24455555444444465555 7899999999999999999997 444331 2221
Q ss_pred CCCcCEEEe--ec
Q psy1628 103 DIIPDIVTV--VW 113 (114)
Q Consensus 103 ~v~PDivt~--gK 113 (114)
..+|+++. +|
T Consensus 182 -~~~di~~~s~~K 193 (366)
T 1m32_A 182 -LHIDYLISSANK 193 (366)
T ss_dssp -TTCSEEEEESSS
T ss_pred -cCccEEEecCcc
Confidence 34788865 46
No 150
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=97.67 E-value=5.7e-05 Score=58.74 Aligned_cols=72 Identities=13% Similarity=0.027 Sum_probs=50.2
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc-cccccCccchhhhhcC
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV-GFGRVGTHWWAFQLQG 101 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfgRtG~~~~~~~~~g 101 (114)
+.+++.+++.. +++.++++++..| +...++++.++|+++|+++|.||+++ |+...|. ..+ .++
T Consensus 110 ~~l~~~i~~~~------~~~~~v~~~~~~G-------~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~-~~~--~~~ 173 (394)
T 1o69_A 110 DLLKLAIKECE------KKPKALILTHLYG-------NAAKMDEIVEICKENDIVLIEDAAEALGSFYKNK-ALG--TFG 173 (394)
T ss_dssp HHHHHHHHHCS------SCCCEEEEECGGG-------CCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE-ETT--SSS
T ss_pred HHHHHHHhccc------CCceEEEEECCCC-------ChhhHHHHHHHHHHcCCEEEEECcCcccceeCCc-ccc--ccc
Confidence 34566665531 3678899988544 34678999999999999999999999 8765554 211 111
Q ss_pred CCCCcCEEEeec
Q psy1628 102 DDIIPDIVTVVW 113 (114)
Q Consensus 102 ~~v~PDivt~gK 113 (114)
.+|+.+++|
T Consensus 174 ---~~~~~s~s~ 182 (394)
T 1o69_A 174 ---EFGVYSYNG 182 (394)
T ss_dssp ---SEEEEECCT
T ss_pred ---CcEEEEEeC
Confidence 367887754
No 151
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=97.64 E-value=9.9e-05 Score=56.94 Aligned_cols=47 Identities=9% Similarity=-0.111 Sum_probs=36.5
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGF 87 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGf 87 (114)
.++.++++...+...|. ..+.+.++++.++|++||+++|.||++..+
T Consensus 179 ~~~~~v~~~~p~NptG~-~~~~~~~~~l~~~a~~~~~~li~De~~~~~ 225 (417)
T 3g7q_A 179 EETGMICVSRPTNPTGN-VITDEELMKLDRLANQHNIPLVIDNAYGVP 225 (417)
T ss_dssp TTEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHTTCCEEEECTTCTT
T ss_pred cCceEEEECCCCCCCCC-ccCHHHHHHHHHHHHHcCCEEEEeCCCccc
Confidence 45677777655555665 456666999999999999999999999643
No 152
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=97.62 E-value=0.00012 Score=57.35 Aligned_cols=46 Identities=7% Similarity=-0.100 Sum_probs=36.2
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVG 86 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tG 86 (114)
.++.++++...+...|. ..+.+.++++.++|++||+++|.||++..
T Consensus 205 ~~~~~v~i~~p~nptG~-~~~~~~l~~i~~~a~~~~~~li~De~~~~ 250 (444)
T 3if2_A 205 GRIGAICCSRPTNPTGN-VLTDEEMAHLAEIAKRYDIPLIIDNAYGM 250 (444)
T ss_dssp TCEEEEEEESSCTTTCC-CCCHHHHHHHHHHHHHTTCCEEEECTTCT
T ss_pred CCceEEEeCCCCCCCCC-cCCHHHHHHHHHHHHHCCCEEEEECCCCC
Confidence 46777777544555565 45677799999999999999999999964
No 153
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=97.61 E-value=8.9e-05 Score=56.91 Aligned_cols=51 Identities=18% Similarity=0.199 Sum_probs=40.8
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
+.+++.+.+ +++.+++++..++..|...+ ++++.++|++||+++|+||+++
T Consensus 126 ~~l~~~i~~--------~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~ 176 (416)
T 3isl_A 126 EDIIREIKK--------VKPKIVAMVHGETSTGRIHP----LKAIGEACRTEDALFIVDAVAT 176 (416)
T ss_dssp HHHHHHHHH--------HCCSEEEEESEETTTTEECC----CHHHHHHHHHTTCEEEEECTTT
T ss_pred HHHHHHHhh--------CCCcEEEEEccCCCCceecC----HHHHHHHHHHcCCEEEEECCcc
Confidence 345666654 25688899988887787665 7899999999999999999987
No 154
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=97.61 E-value=3.8e-05 Score=58.25 Aligned_cols=44 Identities=18% Similarity=0.153 Sum_probs=37.2
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 42 PCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 42 iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
++++++++.++..|....+.+.++++.++|++||+++|+||.+.
T Consensus 136 ~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~ 179 (357)
T 3lws_A 136 IACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARL 179 (357)
T ss_dssp CSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTH
T ss_pred cceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchh
Confidence 78899998776543367789999999999999999999999764
No 155
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=97.60 E-value=6.7e-05 Score=57.37 Aligned_cols=60 Identities=20% Similarity=0.179 Sum_probs=43.1
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEee
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~g 112 (114)
++.+++++......|...+ ++++.++|+++|+++|+||+++ +|... +..+. ..+|+++.+
T Consensus 143 ~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~li~Dea~~-~g~~~---~~~~~----~~~d~~~~s 202 (396)
T 2ch1_A 143 QPKCLFLTHGDSSSGLLQP----LEGVGQICHQHDCLLIVDAVAS-LCGVP---FYMDK----WEIDAVYTG 202 (396)
T ss_dssp CCSEEEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-BTTBC---CCTTT----TTCCEEECC
T ss_pred CCCEEEEECCCCCCceecC----HHHHHHHHHHcCCEEEEEcccc-ccCCc---cchhh----cCcCEEEEc
Confidence 4667888777666676665 7899999999999999999987 55332 12222 346887765
No 156
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=97.60 E-value=0.00017 Score=55.18 Aligned_cols=60 Identities=20% Similarity=0.220 Sum_probs=46.0
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEee
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~g 112 (114)
.+..++++++.++..|...+ ++++.++|++||+++|.||+++ ++.. ...... . +|+++.+
T Consensus 158 ~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~-~~~~-----~~~~~~--~-~d~~~~s 217 (400)
T 3vax_A 158 PDTLLVSLMHVNNETGVIQP----VAELAQQLRATPTYLHVDAAQG-YGKV-----PGDLTT--P-IDMISIS 217 (400)
T ss_dssp TTEEEEECCSBCTTTCBBCC----HHHHHHHHTTSSCEEEEECTTT-TTTS-----GGGGGS--C-CSEEEEE
T ss_pred CCceEEEEECCCCCceeeCc----HHHHHHHHHhcCCEEEEEhhhh-cCCC-----CcChhh--c-CcEEEEe
Confidence 57889999998887786655 6899999999999999999997 2221 122223 4 8998887
No 157
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=97.58 E-value=0.00019 Score=54.98 Aligned_cols=68 Identities=15% Similarity=0.151 Sum_probs=44.1
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhh-hhcCCCCCcCEEEeecC
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAF-QLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~-~~~g~~v~PDivt~gK~ 114 (114)
++++++++..+...|... +. ++++++|+.+++++|.||++++|++... .+.. +.++ +..+++.+++|.
T Consensus 164 ~~~~v~~~~~~nptG~~~-~~---~~l~~l~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~-~~~i~~~s~sK~ 232 (369)
T 3cq5_A 164 QPDIVFVTTPNNPTGDVT-SL---DDVERIINVAPGIVIVDEAYAEFSPSPS-ATTLLEKYP-TKLVVSRTMSKA 232 (369)
T ss_dssp CCSEEEEESSCTTTCCCC-CH---HHHHHHHHHCSSEEEEECTTGGGCCSCC-GGGGTTTCT-TTEEEEEESSST
T ss_pred CCCEEEEeCCCCCCCCCC-CH---HHHHHHHHhCCCEEEEECCchhhcCCcc-hHHHHhhCC-CCEEEEEechHh
Confidence 567888877777677655 44 4556666677799999999999976433 3332 2111 023556677774
No 158
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=97.57 E-value=0.00023 Score=56.61 Aligned_cols=61 Identities=13% Similarity=0.074 Sum_probs=42.0
Q ss_pred HHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccC
Q psy1628 24 FFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVG 91 (114)
Q Consensus 24 ~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG 91 (114)
.+++.+.+.. .+...+++...+...|. ..+.+.++++.++|++||+++|.||+..+|+..+
T Consensus 191 ~l~~~l~~~~------~~~~~v~~~~p~NPtG~-~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~ 251 (448)
T 3meb_A 191 NTKKDIQSAP------EKSIFLFHACAHNPSGI-DFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGS 251 (448)
T ss_dssp HHHHHHHHSC------TTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSC
T ss_pred HHHHHHHhCC------CCcEEEEeCCCCCCCCc-CCCHHHHHHHHHHHHHCCCEEEEecccccccCCC
Confidence 4555555531 23344343333333454 5677889999999999999999999999997665
No 159
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=97.57 E-value=0.00026 Score=57.57 Aligned_cols=67 Identities=16% Similarity=0.030 Sum_probs=47.9
Q ss_pred HHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCC
Q psy1628 24 FFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDD 103 (114)
Q Consensus 24 ~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~ 103 (114)
.+++.+.+ +.+.++++|+..+..|.+.+ ++++.++|++||+++|+||+++.. . . .....
T Consensus 191 ~l~~ai~~--------~tv~lV~le~p~NptG~v~d----l~~I~~la~~~g~~livD~a~~~~----~-~--~~~~~-- 249 (445)
T 1qgn_A 191 ALELALNQ--------KKVNLFFTESPTNPFLRCVD----IELVSKLCHEKGALVCIDGTFATP----L-N--QKALA-- 249 (445)
T ss_dssp HHHHHHHH--------SCEEEEEEESSCTTTCCCCC----HHHHHHHHHHTTCEEEEECTTTCT----T-T--CCTTT--
T ss_pred HHHHHhcc--------CCCCEEEEeCCCCCCCcccC----HHHHHHHHHHcCCEEEEECCCccc----c-c--CCccc--
Confidence 45555553 34589999998877776654 789999999999999999999732 1 1 12233
Q ss_pred CCcCEEEe
Q psy1628 104 IIPDIVTV 111 (114)
Q Consensus 104 v~PDivt~ 111 (114)
..+|+++.
T Consensus 250 ~g~Div~~ 257 (445)
T 1qgn_A 250 LGADLVLH 257 (445)
T ss_dssp TTCSEEEE
T ss_pred cCCEEEEE
Confidence 56798873
No 160
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=97.56 E-value=8.3e-05 Score=56.78 Aligned_cols=60 Identities=17% Similarity=0.119 Sum_probs=43.7
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEee
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~g 112 (114)
++.+++++......|...+ ++++.++|++||+++|+||+++ ++... +..+. ..+|+++.+
T Consensus 144 ~~~~v~~~~~~nptG~~~~----l~~i~~~~~~~~~~li~D~a~~-~~~~~---~~~~~----~~~d~~~~s 203 (393)
T 2huf_A 144 KPSVLFLTQGDSSTGVLQG----LEGVGALCHQHNCLLIVDTVAS-LGGAP---MFMDR----WEIDAMYTG 203 (393)
T ss_dssp CCSEEEEESEETTTTEECC----CTTHHHHHHHTTCEEEEECTTT-BTTBC---CCTTT----TTCSEEECC
T ss_pred CCcEEEEEccCCCccccCC----HHHHHHHHHHcCCEEEEEcccc-cCCCC---cchhh----cCccEEEEC
Confidence 4567888887776777665 7899999999999999999975 54332 12222 347888875
No 161
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=97.56 E-value=0.00019 Score=55.17 Aligned_cols=61 Identities=21% Similarity=0.152 Sum_probs=45.5
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEee
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~g 112 (114)
.++.++++++.++..|...+ ++++.++|+++|+++|+||+++ +|... +..+.++ +|+++.+
T Consensus 164 ~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~li~D~a~~-~g~~~---~~~~~~~----~d~~~~s 224 (406)
T 3cai_A 164 KSTRLVAVNSASGTLGGVTD----LRAMTKLVHDVGALVVVDHSAA-APYRL---LDIRETD----ADVVTVN 224 (406)
T ss_dssp TTEEEEEEESBCTTTCBBCC----CHHHHHHHHHTTCEEEEECTTT-TTTCC---CCHHHHC----CSEEEEE
T ss_pred CCceEEEEeCCcCCccccCC----HHHHHHHHHHcCCEEEEEcccc-cCCCC---CCchhcC----CCEEEee
Confidence 47889999998887787665 6899999999999999999997 33221 2333333 6887764
No 162
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=97.56 E-value=8.6e-05 Score=55.81 Aligned_cols=43 Identities=12% Similarity=0.130 Sum_probs=37.7
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHH-hCCeEEEcccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRA-AGGVCVADEVQVG 86 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~-~gillI~DEV~tG 86 (114)
+++.++++++.++..|...+ ++++.++|++ +|+++|+||+++.
T Consensus 82 ~~~~~v~~~~~~nptG~~~~----~~~i~~~~~~~~~~~li~D~a~~~ 125 (331)
T 1pff_A 82 PNTRIVYFETPANPTLKVID----IEDAVKQARKQKDILVIVDNTFAS 125 (331)
T ss_dssp TTEEEEEEESSCTTTCCCCC----HHHHHHHHTTSSSCEEEEECTTTH
T ss_pred CCCeEEEEECCCCCcCcccC----HHHHHHHHhhhcCCEEEEECCCcc
Confidence 57899999998887787664 8999999999 9999999999973
No 163
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=97.55 E-value=0.00025 Score=53.71 Aligned_cols=60 Identities=13% Similarity=0.135 Sum_probs=43.9
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh--CCeEEEccccccccccCccchhhhhcCCCCCcCEEEee
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAA--GGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~--gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~g 112 (114)
++.++++++.+...|...+ ++++.++|++| |+++|.||+++ ++... +..+. ..+|+++.+
T Consensus 137 ~~~~v~~~~~~nptG~~~~----l~~i~~~~~~~~~~~~li~D~a~~-~~~~~---~~~~~----~~~d~~~~s 198 (385)
T 2bkw_A 137 SYGAVTVTHVDTSTAVLSD----LKAISQAIKQTSPETFFVVDAVCS-IGCEE---FEFDE----WGVDFALTA 198 (385)
T ss_dssp CCSEEEEESEETTTTEECC----HHHHHHHHHHHCTTSEEEEECTTT-TTTSC---CCTTT----TTCSEEEEE
T ss_pred CCCEEEEEccCCCcCeEcC----HHHHHHHHHhhCCCCEEEEECccc-cCCcc---ccccc----cCceEEEec
Confidence 5678899988877787665 78999999999 99999999997 33221 12222 346887764
No 164
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=97.55 E-value=0.00024 Score=57.38 Aligned_cols=53 Identities=9% Similarity=-0.022 Sum_probs=43.5
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHH--hCCeEEEccccccccccCc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRA--AGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~--~gillI~DEV~tGfgRtG~ 92 (114)
.++.++++|+.+++......+...++++.++|++ +|+++|+||++..+.....
T Consensus 164 ~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~ 218 (431)
T 3ht4_A 164 SNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQE 218 (431)
T ss_dssp TTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCC
T ss_pred CCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCC
Confidence 5789999997555444457788899999999999 9999999999998865443
No 165
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=97.54 E-value=7.4e-05 Score=57.32 Aligned_cols=58 Identities=14% Similarity=0.072 Sum_probs=41.4
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc-cccccCccchhhhhcCCCCCcCEEEee
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV-GFGRVGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfgRtG~~~~~~~~~g~~v~PDivt~g 112 (114)
+++++++.+...| ....+++++++|++||+++|.||+++ |....|+ ..+ ..+|++++|
T Consensus 122 ~~~~~v~~~~~~G-------~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~------~~~--~~~di~~~S 180 (367)
T 3nyt_A 122 PRTKAIIPVSLYG-------QCADFDAINAIASKYGIPVIEDAAQSFGASYKGK------RSC--NLSTVACTS 180 (367)
T ss_dssp TTEEEECCBCGGG-------CCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTE------ETT--SSSSEEEEE
T ss_pred cCCcEEEeeCCcc-------ChhhHHHHHHHHHHcCCEEEEECccccCCeECCe------ecc--CCCCEEEEE
Confidence 5788888655443 23458999999999999999999997 4433343 223 334999987
No 166
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=97.50 E-value=0.00014 Score=57.86 Aligned_cols=30 Identities=13% Similarity=0.165 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHhCCeEEEcccc-ccccccCc
Q psy1628 63 YLREVYKHVRAAGGVCVADEVQ-VGFGRVGT 92 (114)
Q Consensus 63 fl~~lr~lc~~~gillI~DEV~-tGfgRtG~ 92 (114)
++++++++|++||+++|+||++ +|+...|.
T Consensus 201 ~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~ 231 (447)
T 3h7f_A 201 DFAAFRSIADEVGAKLLVDMAHFAGLVAAGL 231 (447)
T ss_dssp CHHHHHHHHHHHTCEEEEECTTTHHHHHTTS
T ss_pred CHHHHHHHHHHcCCEEEEECCchhhhhcCCC
Confidence 8899999999999999999996 66655554
No 167
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=97.49 E-value=0.0002 Score=54.76 Aligned_cols=59 Identities=19% Similarity=0.128 Sum_probs=40.8
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEee
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~g 112 (114)
.++.++++.... |.. ..++++.++|++||+++|.||+++- |. .+..+.++ ..+|+++++
T Consensus 123 ~~~~~v~~~n~~---G~~----~~l~~i~~l~~~~~~~li~D~a~~~----g~-~~~~~~~~--~~~d~~~~S 181 (373)
T 3frk_A 123 EKTKAIIAVHLY---GQP----ADMDEIKRIAKKYNLKLIEDAAQAH----GS-LYKGMKVG--SLGDAAGFS 181 (373)
T ss_dssp TTEEEEEEECCT---TCC----CCHHHHHHHHHHHTCEEEEECTTCT----TC-EETTEETT--SSSSEEEEE
T ss_pred CCCeEEEEECCC---cCc----ccHHHHHHHHHHcCCEEEEECCccc----CC-EECCEecc--ccccEEEEe
Confidence 467777744333 322 3478999999999999999999972 22 22233445 557999998
No 168
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=97.49 E-value=0.00016 Score=58.11 Aligned_cols=63 Identities=14% Similarity=-0.073 Sum_probs=43.0
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccc-cCccchhhhhcCCCCCcCEEEee
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGR-VGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgR-tG~~~~~~~~~g~~v~PDivt~g 112 (114)
.++.++++.+ +...|...+ ++++.++|++||+++|+||++++..+ .+. .+.... ..+|+++.+
T Consensus 145 ~~~~~v~~~~-~n~~G~~~~----l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~~~----~g~Di~~~S 208 (446)
T 2x3l_A 145 DGHKLVVLTY-PNYYGETFN----VEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDSTLN----YQADYVVQS 208 (446)
T ss_dssp --CCEEEEES-SCTTSCCCC----HHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCGGG----GTCSEEEEC
T ss_pred CCceEEEEEC-CCCCeEecC----HHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCChHH----cCCCEEEEC
Confidence 3567888888 555676654 78999999999999999999987322 221 122222 347898877
No 169
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=97.48 E-value=0.00015 Score=55.29 Aligned_cols=64 Identities=17% Similarity=0.157 Sum_probs=42.4
Q ss_pred EEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEeecC
Q psy1628 44 AFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 44 AviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~gK~ 114 (114)
+++++..+...|...+. ++++++|+++|+++|.||++++|...+. ....+.++ ....+.+++|.
T Consensus 152 ~v~i~~p~nptG~~~~~----~~l~~l~~~~~~~li~De~~~~~~~~~~-~~~~~~~~--~~i~~~s~sK~ 215 (360)
T 3hdo_A 152 VFFLTTPNAPLGPSFPL----EYIDELARRCAGMLVLDETYAEFAESNA-LELVRRHE--NVVVTRTLSKS 215 (360)
T ss_dssp EEEEESSCTTTCCCCCH----HHHHHHHHHBSSEEEEECTTGGGSSCCC-THHHHHCS--SEEEEEESTTT
T ss_pred EEEEeCCCCCCCCCcCH----HHHHHHHHHCCCEEEEECChHhhCCcch-hHHhccCC--CEEEEecchHh
Confidence 55555445555665554 4688899999999999999999854433 22333444 44556667774
No 170
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=97.48 E-value=0.00019 Score=54.49 Aligned_cols=59 Identities=14% Similarity=0.027 Sum_probs=40.9
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEee
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~g 112 (114)
.++.+++ |..- .|... .++++.++|++||+++|.||+++.+ . .+..+..+ ..+|+++++
T Consensus 124 ~~~~~v~--~~n~-~G~~~----~~~~i~~~~~~~~~~li~D~~~~~g----~-~~~~~~~~--~~~d~~~~s 182 (374)
T 3uwc_A 124 DKTKAIM--PVHY-TGNIA----DMPALAKIAKKHNLHIVEDACQTIL----G-RINDKFVG--SWGQFACFS 182 (374)
T ss_dssp TTEEEEC--CBCG-GGCCC----CHHHHHHHHHHTTCEEEEECTTCTT----C-EETTEETT--SSSSEEEEE
T ss_pred CCceEEE--EeCC-cCCcC----CHHHHHHHHHHcCCEEEEeCCCccC----c-eeCCeecc--ccccEEEEe
Confidence 3566666 4332 24332 3889999999999999999999843 2 23334455 567999998
No 171
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=97.43 E-value=0.00065 Score=54.82 Aligned_cols=66 Identities=18% Similarity=0.051 Sum_probs=46.9
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCC-CcCEEEee
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDI-IPDIVTVV 112 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v-~PDivt~g 112 (114)
.++.++++.......|.+.+ +++|.++|++||+++++|+++.|+..... -+.....+ + .+|+++++
T Consensus 244 ~~~~~V~~~~~~~~tG~i~~----l~~I~~la~~~g~~lhvD~a~~~~~~~~~-~~~~~~~g--~~~~D~i~~~ 310 (504)
T 2okj_A 244 YVPFYVNATAGTTVYGAFDP----IQEIADICEKYNLWLHVDAAWGGGLLMSR-KHRHKLNG--IERANSVTWN 310 (504)
T ss_dssp CEEEEEEECBSCSSSCCBCC----HHHHHHHHHHHTCEEEEEETTGGGGGGCT-TTGGGGTT--GGGCSEEEEC
T ss_pred CCceEEEEeCCCCCCCCcCC----HHHHHHHHHHcCCEEEEehhhhhHHHhCH-hhHhhcCC--cccCCEEEEC
Confidence 36888888665555565533 88999999999999999999998854332 22223333 4 67998875
No 172
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=97.43 E-value=0.00018 Score=57.82 Aligned_cols=63 Identities=14% Similarity=0.004 Sum_probs=44.1
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEe--ec
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTV--VW 113 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~--gK 113 (114)
+++++++++. +...|.. .+.++++.++|++||+++|+||++..+ ..|. . ....+ .+|++++ +|
T Consensus 202 ~~t~~v~~~~-pn~~G~~---~~~l~~i~~l~~~~g~~li~Dea~~~~-~~g~-~-~~~~~----g~di~~~s~~K 266 (474)
T 1wyu_B 202 PHVAALMLTN-PNTLGLF---ERRILEISRLCKEAGVQLYYDGANLNA-IMGW-A-RPGDM----GFDVVHLNLHK 266 (474)
T ss_dssp TTEEEEEECS-SCTTSCC---CTTHHHHHHHHHHHTCEEEEEGGGGGG-TTTT-C-CHHHH----TCSEEECCTTT
T ss_pred CCceEEEEEC-CCCCccc---CCCHHHHHHHHHHcCCEEEEeCchhhh-hccC-C-CcccC----CCcEEEEeCcc
Confidence 5789999987 3445655 246899999999999999999999533 2332 1 11222 3688887 56
No 173
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=97.39 E-value=0.00022 Score=55.00 Aligned_cols=59 Identities=15% Similarity=0.063 Sum_probs=43.5
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc-cccccCccchhhhhcCCCCCcCEEEeec
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV-GFGRVGTHWWAFQLQGDDIIPDIVTVVW 113 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfgRtG~~~~~~~~~g~~v~PDivt~gK 113 (114)
.++.++++....|+ +..++++.++|++||+++|.||+++ |... ..+.+| ..+|+.+++|
T Consensus 127 ~~~~~v~~~~~~g~-------~~~~~~i~~l~~~~~~~li~D~a~~~g~~~------~~~~~g--~~~~~~~~s~ 186 (390)
T 3b8x_A 127 DSTKAILTVNLLGN-------PNNFDEINKIIGGRDIILLEDNCESMGATF------NNKCAG--TFGLMGTFSS 186 (390)
T ss_dssp TTEEEEEEECGGGC-------CCCHHHHHHHHTTSCCEEEEECTTCTTCEE------TTEETT--SSSSEEEEEC
T ss_pred cCCeEEEEECCccC-------hhhHHHHHHHHHHcCCEEEEECcCcccCEE------CCcccc--cccceEEEEc
Confidence 46777877543332 2568999999999999999999998 4322 223456 7789999886
No 174
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=97.38 E-value=0.00046 Score=54.75 Aligned_cols=53 Identities=11% Similarity=-0.002 Sum_probs=44.2
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
+.+++.++++. .++++++++..+...|...+ ++++.++|++||+++|+|++++
T Consensus 202 ~~l~~~i~~~~------~~~~lv~~~~~~n~tG~~~~----l~~i~~la~~~g~~vi~D~a~~ 254 (465)
T 3e9k_A 202 EDILEVIEKEG------DSIAVILFSGVHFYTGQHFN----IPAITKAGQAKGCYVGFDLAHA 254 (465)
T ss_dssp HHHHHHHHHHG------GGEEEEEEESBCTTTCBBCC----HHHHHHHHHHTTCEEEEECTTT
T ss_pred HHHHHHHHhcC------CCeEEEEEeCcccCcceeec----HHHHHHHHHHcCCEEEEEhhhh
Confidence 45666776652 58999999999988887765 6899999999999999999987
No 175
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=97.38 E-value=8e-05 Score=59.62 Aligned_cols=47 Identities=9% Similarity=-0.144 Sum_probs=39.0
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRV 90 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRt 90 (114)
.++++++++......|...+ +++++++|++||+++|+||+++|+.+.
T Consensus 205 ~~~~~v~~~~p~nptG~~~~----l~~i~~la~~~g~~livD~a~~~~~~~ 251 (497)
T 3mc6_A 205 KNTVLLVGSAPNFPHGIADD----IEGLGKIAQKYKLPLHVDSCLGSFIVS 251 (497)
T ss_dssp SSEEEEEEETTCTTTCCCCS----CTTTTTHHHHTTCCEEEETTTTHHHHG
T ss_pred hCCEEEEEECCCCCCCcCCC----HHHHHHHHHHhCCEEEEECcchhhhhh
Confidence 46889999988777776654 668999999999999999999987553
No 176
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=97.33 E-value=0.00042 Score=54.53 Aligned_cols=46 Identities=9% Similarity=0.003 Sum_probs=40.0
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh----CCeEEEccccccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAA----GGVCVADEVQVGFGR 89 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~----gillI~DEV~tGfgR 89 (114)
.++.+++++...+..|.+.+ ++++.++|+++ |+++|.||+++.+.+
T Consensus 137 ~~t~lv~~~~~~nptG~~~~----l~~i~~la~~~~~~~~~~livD~a~~~~~~ 186 (393)
T 1n8p_A 137 ENTKLVWIETPTNPTLKVTD----IQKVADLIKKHAAGQDVILVVDNTFLSPYI 186 (393)
T ss_dssp SSEEEEEECSSCTTTCCCCC----HHHHHHHHHHHTTTTTCEEEEECTTTHHHH
T ss_pred cCceEEEEECCCCCcceecC----HHHHHHHHHHhCCCCCCEEEEeCCcccccc
Confidence 47889999998887787664 89999999999 999999999997754
No 177
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=97.31 E-value=0.00056 Score=51.40 Aligned_cols=45 Identities=13% Similarity=0.197 Sum_probs=37.7
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
++.++++++.+...|-...+.+.++++.++|++||+++|+||.+.
T Consensus 132 ~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~ 176 (347)
T 1jg8_A 132 RTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARI 176 (347)
T ss_dssp CEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTH
T ss_pred CceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhh
Confidence 688999988876552256778899999999999999999999764
No 178
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=97.29 E-value=0.00038 Score=54.08 Aligned_cols=62 Identities=18% Similarity=0.259 Sum_probs=46.2
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC----------CeEEEccccccccccCccchhhhhcCCCCCcCEE
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAG----------GVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIV 109 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~g----------illI~DEV~tGfgRtG~~~~~~~~~g~~v~PDiv 109 (114)
.++.++++++.....|...+ ++++.++|+++| +++|+||++ ++++... .... ..+|++
T Consensus 174 ~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~~~~~~~~~~~~livDea~-~~~~~~~---~~~~----~~~d~~ 241 (432)
T 3a9z_A 174 PTTCLVTIMLANNETGVIMP----ISEISRRIKALNQIRAASGLPRVLVHTDAAQ-ALGKRRV---DVED----LGVDFL 241 (432)
T ss_dssp TTEEEEECCSBCTTTCBBCC----HHHHHHHHHHHHHHHHHHTCCCCEEEEECTT-TTTTSCC---CHHH----HCCSEE
T ss_pred CCceEEEEECcccCcccccC----HHHHHHHHHhcCcccccccCCceEEEEEchh-hhCCccc---Chhh----cCCCEE
Confidence 46889999998877787766 468999999999 999999999 4555432 2222 347888
Q ss_pred Ee--ec
Q psy1628 110 TV--VW 113 (114)
Q Consensus 110 t~--gK 113 (114)
+. +|
T Consensus 242 ~~s~~K 247 (432)
T 3a9z_A 242 TIVGHK 247 (432)
T ss_dssp EEEGGG
T ss_pred EEehhH
Confidence 76 55
No 179
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=97.22 E-value=0.00071 Score=54.60 Aligned_cols=42 Identities=24% Similarity=0.172 Sum_probs=36.1
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
.++.++++|...+..|...+ ++++.++|+++|+++|+||+++
T Consensus 166 ~~t~~v~~e~p~NptG~~~d----l~~i~~la~~~g~~livD~a~~ 207 (430)
T 3ri6_A 166 ETTKLLFLETISNPQLQVAD----LEALSKVVHAKGIPLVVDTTMT 207 (430)
T ss_dssp TTEEEEEEESSCTTTCCCCC----HHHHHHHHHTTTCCEEEECTTS
T ss_pred CCCeEEEEECCCCCCCeecC----HHHHHHHHHHcCCEEEEECCCc
Confidence 57899999988776676553 7799999999999999999986
No 180
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=97.22 E-value=0.00076 Score=50.39 Aligned_cols=60 Identities=13% Similarity=0.066 Sum_probs=43.6
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh--CCeEEEccccccccccCccchhhhhcCCCCCcCEEEee
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAA--GGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~--gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~g 112 (114)
++.+++++..+...|...+ ++++.++|++| |+++|.||+++ +|... +..+. ..+|+++.+
T Consensus 121 ~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~~~li~D~a~~-~~~~~---~~~~~----~~~d~~~~s 182 (352)
T 1iug_A 121 GYAGLLLVHSETSTGALAD----LPALARAFKEKNPEGLVGADMVTS-LLVGE---VALEA----MGVDAAASG 182 (352)
T ss_dssp SCSEEEEESEETTTTEECC----HHHHHHHHHHHCTTCEEEEECTTT-BTTBC---CCSGG----GTCSEEEEE
T ss_pred CCcEEEEEEecCCcceecC----HHHHHHHHHhhCCCCEEEEECCcc-ccCcc---eeccc----cCeeEEEec
Confidence 4678888887777776655 78999999999 99999999986 44332 12222 236888765
No 181
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=97.21 E-value=0.0004 Score=53.43 Aligned_cols=59 Identities=19% Similarity=0.184 Sum_probs=39.4
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEee
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~g 112 (114)
.++.++++.... |.. ..++++.++|+++|+++|.||+++- |. .+.....+ ..+|+++++
T Consensus 143 ~~~~~v~~~n~t---G~~----~~~~~i~~l~~~~~~~li~D~a~~~----g~-~~~~~~~~--~~~di~~~S 201 (391)
T 3dr4_A 143 PRTKAIMPVHLY---GQI----CDMDPILEVARRHNLLVIEDAAEAV----GA-TYRGKKSG--SLGDCATFS 201 (391)
T ss_dssp TTEEEECCBCGG---GCC----CCHHHHHHHHHHTTCEEEEECTTCT----TC-EETTEETT--SSSSEEEEE
T ss_pred CCceEEEEECCC---CCh----hhHHHHHHHHHHcCCEEEEECcccc----cc-eECCeeec--ccCCEEEEE
Confidence 467777754333 322 3488999999999999999999972 21 11122234 456898888
No 182
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=97.16 E-value=0.0007 Score=55.63 Aligned_cols=70 Identities=11% Similarity=-0.147 Sum_probs=47.2
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHH-HhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEeec
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVR-AAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVVW 113 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~-~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~gK 113 (114)
.++.++++.....-.| ...+.+.++++.++|+ +||+++|.||++.+|...+. .......+ ....+.+++|
T Consensus 243 ~~~k~v~l~~p~NPtG-~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~-~~~~~~~~--~~i~~~S~SK 313 (533)
T 3f6t_A 243 PSIKALIVVNPTNPTS-KEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFK-SIYSVVPY--NTMLVYSYSK 313 (533)
T ss_dssp TTEEEEEEESSCTTTC-BCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCC-CHHHHSGG--GEEEEEESHH
T ss_pred CCCeEEEEeCCCCCCc-cccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCcc-CHhhcCCC--CEEEEecCcc
Confidence 4677777653333345 4557788999999999 68999999999999976554 22222222 4456667776
No 183
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=97.14 E-value=0.0011 Score=52.20 Aligned_cols=45 Identities=18% Similarity=0.135 Sum_probs=38.8
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHH-hCCeEEEcccccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRA-AGGVCVADEVQVGFG 88 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~-~gillI~DEV~tGfg 88 (114)
.++.+++++...+..|.+.+ ++++.++|++ +|+++|+||+++.+.
T Consensus 146 ~~t~~v~l~~p~NptG~v~~----l~~i~~la~~~~~~~li~De~~~~~~ 191 (404)
T 1e5e_A 146 PNTKIVYFETPANPTLKIID----MERVCKDAHSQEGVLVIADNTFCSPM 191 (404)
T ss_dssp TTEEEEEEESSCTTTCCCCC----HHHHHHHHHTSTTCEEEEECTTTCTT
T ss_pred CCCcEEEEECCCCCCCcccC----HHHHHHHHHhhcCCEEEEECCCchhh
Confidence 47889999988777776663 8999999999 999999999999774
No 184
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=97.14 E-value=0.0005 Score=52.55 Aligned_cols=57 Identities=14% Similarity=0.093 Sum_probs=42.1
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc-cccccCccchhhhhcCCCCCcCEEEee
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV-GFGRVGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfgRtG~~~~~~~~~g~~v~PDivt~g 112 (114)
.++.++++.+..|. . . .++++.++|+++|+++|.||+++ |+...|. . ++ . +|+++++
T Consensus 126 ~~~~~v~~~~~~G~---~-~---~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~-~-----~~--~-~d~~~~S 183 (393)
T 1mdo_A 126 PQTKAIIPVHYAGA---P-A---DLDAIYALGERYGIPVIEDAAHATGTSYKGR-H-----IG--A-RGTAIFS 183 (393)
T ss_dssp TTEEEECCBCGGGC---C-C---CHHHHHHHHHHHTCCBCEECTTCTTCEETTE-E-----TT--S-SSEEEEE
T ss_pred CCceEEEEeCCCCC---c-C---CHHHHHHHHHHcCCeEEEECccccCCeECCe-e-----cC--C-CCeEEEe
Confidence 46788888875442 2 2 38999999999999999999998 5534443 1 23 3 7999887
No 185
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=97.13 E-value=0.0015 Score=50.21 Aligned_cols=50 Identities=16% Similarity=0.074 Sum_probs=37.2
Q ss_pred CceEEEEE-cccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccC
Q psy1628 40 LYPCAFFA-ESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVG 91 (114)
Q Consensus 40 ~~iAAvii-EPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG 91 (114)
.++.++++ .|. ...| ...+.+.++++.++|++||+++|.||++..+...|
T Consensus 163 ~~~~~v~~~~p~-NPtG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~ 213 (385)
T 1b5p_A 163 PRTKALVVNSPN-NPTG-AVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG 213 (385)
T ss_dssp TTEEEEEEESSC-TTTC-CCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS
T ss_pred CCCEEEEEeCCC-CCCC-CCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC
Confidence 35655555 553 2234 34577999999999999999999999999875544
No 186
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=97.12 E-value=0.0017 Score=49.95 Aligned_cols=51 Identities=14% Similarity=0.095 Sum_probs=40.6
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccC
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVG 91 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG 91 (114)
.+...+++...+...|. ..+.+.++++.++|++||+++|.||+..+|+..+
T Consensus 174 ~~~~~v~i~~p~NPtG~-~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~ 224 (401)
T 7aat_A 174 EKSIILLHACAHNPTGV-DPRQEQWKELASVVKKRNLLAYFDMAYQGFASGD 224 (401)
T ss_dssp TTCEEEEESSSCTTTCC-CCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSC
T ss_pred CCcEEEEeCCCCCCCCC-CCCHHHHHHHHHHHHhCCcEEEEccccccccCCC
Confidence 46667777665554554 5678899999999999999999999999887654
No 187
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=97.08 E-value=0.0012 Score=53.64 Aligned_cols=43 Identities=19% Similarity=0.206 Sum_probs=37.5
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVG 86 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tG 86 (114)
.++.+++++...+..|.+.+ ++++.++|++||+++|+||+++.
T Consensus 216 ~~tk~v~l~~p~NptG~v~~----l~~i~~la~~~gi~livDea~~~ 258 (464)
T 1ibj_A 216 PQTKLVWLESPTNPRQQISD----IRKISEMAHAQGALVLVDNSIMS 258 (464)
T ss_dssp SSEEEEEECSSCTTTCCCCC----HHHHHHHHHTTTCEEEEECTTTC
T ss_pred cCceEEEEeCCCCCCCEeec----HHHHHHHHHHcCCEEEEECCCcc
Confidence 57899999998877776663 89999999999999999999973
No 188
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=97.07 E-value=0.00098 Score=52.10 Aligned_cols=58 Identities=17% Similarity=0.065 Sum_probs=42.2
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc-cccccCccchhhhhcCCCCCcCEEEee
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV-GFGRVGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfgRtG~~~~~~~~~g~~v~PDivt~g 112 (114)
.++.++++.... |. ...++++.++|+++|+++|.||+++ |+...|. .+ + .-+|+++.+
T Consensus 137 ~~~~~v~~~~~t---G~----~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~-~~-----~--~~~di~~~S 195 (424)
T 2po3_A 137 PRTSAVVGVHLW---GR----PCAADQLRKVADEHGLRLYFDAAHALGCAVDGR-PA-----G--SLGDAEVFS 195 (424)
T ss_dssp TTEEEEEEECGG---GC----CCCHHHHHHHHHHTTCEEEEECTTCTTCEETTE-ET-----T--SSSSEEEEE
T ss_pred cCCcEEEEECCC---CC----cCCHHHHHHHHHHcCCEEEEECccccCCeECCe-ec-----c--cccCEEEEe
Confidence 467777765432 32 2578999999999999999999999 8876554 21 2 235888777
No 189
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=97.07 E-value=0.0015 Score=49.33 Aligned_cols=40 Identities=13% Similarity=0.086 Sum_probs=30.0
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVG 86 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tG 86 (114)
.++.++++... .|...+ ++++.++|++||+++|.||+++.
T Consensus 120 ~~~~~v~~~~~---tG~~~~----l~~i~~l~~~~~~~li~D~a~~~ 159 (375)
T 2fnu_A 120 ERTKAIVSVDY---AGKSVE----VESVQKLCKKHSLSFLSDSSHAL 159 (375)
T ss_dssp TTEEEEEEECG---GGCCCC----HHHHHHHHHHHTCEEEEECTTCT
T ss_pred cCceEEEEeCC---cCCccC----HHHHHHHHHHcCCEEEEECcccc
Confidence 45666555444 344433 68999999999999999999974
No 190
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=97.03 E-value=0.001 Score=52.52 Aligned_cols=44 Identities=14% Similarity=0.080 Sum_probs=38.2
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC-CeEEEccccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAG-GVCVADEVQVGF 87 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~g-illI~DEV~tGf 87 (114)
.++.++++|......|.+.+ ++++.++|+++| +++|+||+++.+
T Consensus 150 ~~t~~v~~~~p~nptG~~~~----l~~i~~la~~~g~~~livD~~~~~~ 194 (403)
T 3cog_A 150 PETKLVWIETPTNPTQKVID----IEGCAHIVHKHGDIILVVDNTFMSP 194 (403)
T ss_dssp TTEEEEEEESSCTTTCCCCC----HHHHHHHHTSSSCCEEEEECTTTCT
T ss_pred cCCeEEEEECCCCCCCeeeC----HHHHHHHHHHcCCCEEEEECCCccc
Confidence 47889999988777776664 899999999999 999999999875
No 191
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=97.02 E-value=0.0011 Score=49.77 Aligned_cols=41 Identities=12% Similarity=0.058 Sum_probs=35.5
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
.+..++++++.+...|...+ ++++.++|++||+ +|.||+++
T Consensus 137 ~~~~~v~~~~~~nptG~~~~----~~~i~~l~~~~~~-li~D~a~~ 177 (382)
T 4hvk_A 137 DDTILVSVQHANNEIGTIQP----VEEISEVLAGKAA-LHIDATAS 177 (382)
T ss_dssp TTEEEEECCSBCTTTCBBCC----HHHHHHHHSSSSE-EEEECTTT
T ss_pred cCceEEEEECCCCCceeeCC----HHHHHHHHHHcCE-EEEEhHHh
Confidence 46789999998887786655 7899999999999 99999986
No 192
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=96.92 E-value=0.0018 Score=48.85 Aligned_cols=60 Identities=13% Similarity=0.140 Sum_probs=43.5
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEEee
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt~g 112 (114)
.++.+++++..+...|...+ ++++.++|++||++ |.||+++ +|... +....+ .+|+++.+
T Consensus 137 ~~~~~v~~~~~~nptG~~~~----l~~i~~l~~~~~~~-i~D~a~~-~g~~~---~~~~~~----~~di~~~s 196 (382)
T 4eb5_A 137 DDTILVSVQHANNEIGTIQP----VEEISEVLAGKAAL-HIDATAS-VGQIE---VDVEKI----GADMLTIS 196 (382)
T ss_dssp TTEEEEECCSBCTTTCBBCC----HHHHHHHHTTSSEE-EEECTTT-BTTBC---CCHHHH----TCSEEEEE
T ss_pred CCCeEEEEeccCCCccccCC----HHHHHHHHHHCCCE-EEEcchh-cCCcc---cCcccc----CCCEEEee
Confidence 46788888888777776654 68999999999999 9999997 54332 122222 36887764
No 193
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=96.84 E-value=0.0017 Score=50.29 Aligned_cols=58 Identities=16% Similarity=0.072 Sum_probs=39.6
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccccc-ccCccchhhhhcCCCCCcCEEEee
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFG-RVGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfg-RtG~~~~~~~~~g~~v~PDivt~g 112 (114)
.+++++++++.. |... + ++++.++|+++|+++|.||+++.+. ..+. .++ ..+|+++++
T Consensus 150 ~~~~~v~~~n~t---G~~~-~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~------~~~--~~~di~~~S 208 (399)
T 2oga_A 150 PRTRALLPVHLY---GHPA-D---MDALRELADRHGLHIVEDAAQAHGARYRGR------RIG--AGSSVAAFS 208 (399)
T ss_dssp TTEEEECCBCGG---GCCC-C---HHHHHHHHHHHTCEECEECTTCTTCEETTE------ETT--CTTCEEEEE
T ss_pred CCCeEEEEeCCc---CCcc-C---HHHHHHHHHHcCCEEEEECcccccCccCCe------ecc--cccCEEEEe
Confidence 467777765443 3332 2 8999999999999999999997331 2332 123 346999885
No 194
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=96.83 E-value=0.00099 Score=50.49 Aligned_cols=47 Identities=19% Similarity=0.014 Sum_probs=35.3
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFG 88 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfg 88 (114)
.++.+++++..+...|.. .+.+.++++.++| ++|+++|.||++++|.
T Consensus 152 ~~~~~v~~~~p~nptG~~-~~~~~l~~l~~~~-~~~~~li~De~~~~~~ 198 (365)
T 3get_A 152 DEIKLIFLCLPNNPLGEC-LDASEATEFIKGV-NEDCLVVIDAAYNEFA 198 (365)
T ss_dssp TTEEEEEEESSCTTTCCC-CCHHHHHHHHHTS-CTTSEEEEECTTHHHH
T ss_pred CCCCEEEEcCCCCCCCCC-cCHHHHHHHHHhC-CCCcEEEEeCccHHHh
Confidence 467888886444445654 4666788888888 6799999999999876
No 195
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=96.63 E-value=0.0039 Score=49.00 Aligned_cols=58 Identities=21% Similarity=0.074 Sum_probs=39.7
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc-cccccCccchhhhhcCCCCCcCEEEee
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV-GFGRVGTHWWAFQLQGDDIIPDIVTVV 112 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfgRtG~~~~~~~~~g~~v~PDivt~g 112 (114)
.++.++++....|+ +..++++.++|+++|+++|.||+++ |....+ +.++ ..+|+++++
T Consensus 157 ~~~~~v~~~~~~g~-------~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~------~~~~--~~~d~~~~s 215 (437)
T 3bb8_A 157 DKTKAIMIAHTLGN-------LFDLAEVRRVADKYNLWLIEDCCDALGSTYDG------KMAG--TFGDIGTVS 215 (437)
T ss_dssp TTEEEEEEECGGGC-------CCCHHHHHHHHHHHTCEEEEECTTCTTCEETT------EETT--SSSSEEEEE
T ss_pred CCCeEEEEeCCCCC-------hhcHHHHHHHHHHcCCEEEEECccccCceECC------eecc--cccCEEEEE
Confidence 46777777433332 1568999999999999999999998 442222 2234 457886664
No 196
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=96.45 E-value=0.0047 Score=47.99 Aligned_cols=43 Identities=7% Similarity=0.020 Sum_probs=35.9
Q ss_pred CceEE-EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 40 LYPCA-FFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 40 ~~iAA-viiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
.++.+ ++++..++.+|. +...++++.++|++||+++|.||++.
T Consensus 139 ~~~~~~v~~~~p~nptG~---~~~~l~~i~~l~~~~~~~li~De~~~ 182 (374)
T 2aeu_A 139 DKDTLVIITGSTMDLKVI---ELENFKKVINTAKNKEAIVFVDDASG 182 (374)
T ss_dssp CTTEEEEEECBCTTSCBC---CHHHHHHHHHHHHHHTCCEEEECTTH
T ss_pred CCccEEEEEccCCCCCCC---CcccHHHHHHHHHHcCCEEEEECCcc
Confidence 46788 888877665565 67889999999999999999999654
No 197
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=96.45 E-value=0.0023 Score=48.99 Aligned_cols=46 Identities=13% Similarity=0.141 Sum_probs=32.5
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc-cccccCc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV-GFGRVGT 92 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t-GfgRtG~ 92 (114)
.++.+++ |.... |.. ..++++.++|++||+++|.||+++ |....|.
T Consensus 125 ~~~~~v~--~~n~t-G~~----~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~ 171 (388)
T 1b9h_A 125 PRTKVIM--PVHMA-GLM----ADMDALAKISADTGVPLLQDAAHAHGARWQGK 171 (388)
T ss_dssp TTEEEEC--CBCGG-GCC----CCHHHHHHHHHHHTCCBCEECTTCTTCEETTE
T ss_pred cCceEEE--EeCCc-cCc----CCHHHHHHHHHHcCCEEEEecchhcCCccCCe
Confidence 3566666 65443 433 247999999999999999999998 4434443
No 198
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=96.39 E-value=0.0045 Score=48.11 Aligned_cols=42 Identities=12% Similarity=0.008 Sum_probs=33.5
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFG 88 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfg 88 (114)
.++.++++....| .. ..++++.++|++||+++|.||+++.+.
T Consensus 129 ~~~~~v~~~~~~G---~~----~~~~~i~~~~~~~~~~li~D~a~~~~~ 170 (418)
T 2c81_A 129 DKTKAIIPVHLFG---SM----ANMDEINEIAQEHNLFVIEDCAQSHGS 170 (418)
T ss_dssp TTEEEECCBCCTT---CC----CCHHHHHHHHHHTTCEEEEECTTCTTC
T ss_pred CCCeEEEEeCCcC---Cc----ccHHHHHHHHHHCCCEEEEECcccccC
Confidence 4678888766443 22 458999999999999999999999775
No 199
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=96.28 E-value=0.012 Score=46.93 Aligned_cols=42 Identities=17% Similarity=0.139 Sum_probs=35.2
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHH--hCCeEEEccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRA--AGGVCVADEVQV 85 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~--~gillI~DEV~t 85 (114)
.++.++++|......|.+.+ ++++.++|++ +|+++|+||++.
T Consensus 166 ~~tklV~~e~~~NptG~v~d----l~~I~~la~~~~~g~~livD~a~a 209 (415)
T 2fq6_A 166 PNTKIVFLESPGSITMEVHD----VPAIVAAVRSVVPDAIIMIDNTWA 209 (415)
T ss_dssp TTEEEEEEESSCTTTCCCCC----HHHHHHHHHHHCTTCEEEEECTTT
T ss_pred cCCcEEEEECCCCCCCEeec----HHHHHHHHHhhcCCCEEEEECCCc
Confidence 46788999887766665553 7899999999 999999999986
No 200
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=96.24 E-value=0.013 Score=47.50 Aligned_cols=48 Identities=19% Similarity=0.068 Sum_probs=36.0
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccc
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGR 89 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgR 89 (114)
++.++++.-.+.-.| ...+.+-++++.++|++||+++|+||+...+..
T Consensus 237 ~~k~ivl~~p~NPtG-~~~s~~~l~~i~~la~~~~~~li~Deay~~~~~ 284 (500)
T 3tcm_A 237 NVRALVVINPGNPTG-QVLAEENQYDIVKFCKNEGLVLLADEVYQENIY 284 (500)
T ss_dssp EEEEEEEESSCTTTC-CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBC
T ss_pred CceEEEEECCCCCCc-ccCCHHHHHHHHHHHHHcCCEEEEecCcccccc
Confidence 666666553233344 456677899999999999999999999998643
No 201
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=96.20 E-value=0.0074 Score=49.95 Aligned_cols=50 Identities=16% Similarity=0.067 Sum_probs=38.6
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHH--HHhCCeEEEcccccccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHV--RAAGGVCVADEVQVGFGRV 90 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc--~~~gillI~DEV~tGfgRt 90 (114)
.++.++++..-+.-.| ...+.+.++++.++| +++|+++|.||+...|...
T Consensus 244 ~~~k~v~l~~p~NPtG-~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~ 295 (546)
T 2zy4_A 244 PAIKIFFCVNPSNPPS-VKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD 295 (546)
T ss_dssp TTEEEEEEESSCSSSC-BCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT
T ss_pred CCCeEEEEECCCCCCC-ccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc
Confidence 4677777774333345 456677899999999 8899999999999998653
No 202
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=96.09 E-value=0.022 Score=46.25 Aligned_cols=61 Identities=15% Similarity=0.015 Sum_probs=43.4
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCC-CCcccCCHHHHHHHHHHHHHhCCeEEEccccccccc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSC-GGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGR 89 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~-gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgR 89 (114)
+.+++.+++.. .. .++.++++. -+++ .| ...+.+-++++.++|++||+++|.||+...+..
T Consensus 221 ~~le~~l~~~~-~~---~~~k~i~l~-np~NPTG-~v~s~~~l~~i~~la~~~~~~li~De~y~~~~~ 282 (498)
T 3ihj_A 221 NELRRAVQEAK-DH---CDPKVLCII-NPGNPTG-QVQSRKCIEDVIHFAWEEKLFLLADEVYQDNVY 282 (498)
T ss_dssp HHHHHHHHHHT-TT---SEEEEEEEE-SSCTTTC-CCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBC
T ss_pred HHHHHHHHhhh-cc---CCCeEEEEE-CCCCCCC-CcCCHHHHHHHHHHHHHcCcEEEEEcCcccccc
Confidence 45666666542 00 257777776 3344 34 456777899999999999999999999988743
No 203
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=95.95 E-value=0.0057 Score=46.09 Aligned_cols=50 Identities=10% Similarity=0.058 Sum_probs=33.6
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
.++.+++++..+...|...+ .+-++++.++|+++ ++|.||+++.|+..+.
T Consensus 128 ~~~~~v~i~~p~nptG~~~~-~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~ 177 (350)
T 3fkd_A 128 SNMDFCWLCNPNNPDGRLLQ-RTEILRLLNDHPDT--TFVLDQSYVSFTTEEV 177 (350)
T ss_dssp TTCSEEEEESSCTTTCCCCC-HHHHHHHHHHCTTS--EEEEECTTTTSCSSCC
T ss_pred CCCCEEEEeCCCCCcCCCCC-HHHHHHHHHhCCCC--EEEEECchhhhccCcc
Confidence 35666777544544565444 44466666666554 9999999999987775
No 204
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=95.86 E-value=0.0097 Score=44.70 Aligned_cols=64 Identities=13% Similarity=0.080 Sum_probs=38.7
Q ss_pred ceEEEE-EcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCccchh-hhhcCCCCCcCEEEeecC
Q psy1628 41 YPCAFF-AESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGTHWWA-FQLQGDDIIPDIVTVVWN 114 (114)
Q Consensus 41 ~iAAvi-iEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~~~~~-~~~~g~~v~PDivt~gK~ 114 (114)
++.+++ ..| +...|. ..+.+.++++.++| | ++|.||++++|+.. . ... .+.++ ....+.+++|.
T Consensus 138 ~~~~v~l~~p-~nptG~-~~~~~~l~~l~~~~---~-~li~De~~~~~~~~-~-~~~~~~~~~--~~i~~~s~sK~ 203 (335)
T 1uu1_A 138 EGDVVFIPNP-NNPTGH-VFEREEIERILKTG---A-FVALDEAYYEFHGE-S-YVDFLKKYE--NLAVIRTFSKA 203 (335)
T ss_dssp TTEEEEEESS-CTTTCC-CCCHHHHHHHHHTT---C-EEEEECTTHHHHCC-C-CGGGGGTCS--SEEEEEESTTT
T ss_pred CCCEEEEeCC-CCCCCC-CCCHHHHHHHHHhC---C-EEEEECcchhhcch-h-HHHHhhhCC--CEEEEecchhh
Confidence 456666 566 344454 45677777776666 8 99999999988532 2 222 12233 34455667774
No 205
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=95.68 E-value=0.05 Score=44.30 Aligned_cols=43 Identities=14% Similarity=-0.055 Sum_probs=34.5
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccc
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGF 87 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGf 87 (114)
.+.++++.-.....|.+. =+++|.++|++||+.+++|+++.|.
T Consensus 248 ~~~~vv~~~~~~~~G~vd----~l~~I~~ia~~~~~~lhvD~a~~~~ 290 (511)
T 3vp6_A 248 VPFYVNATAGTTVYGAFD----PIQEIADICEKYNLWLHVDAAWGGG 290 (511)
T ss_dssp EEEEEEEEBSCSSSCCBC----CHHHHHHHHHHHTCEEEEEETTGGG
T ss_pred CcEEEEEecCCCCCcccc----cHHHHHHHHHHcCCEEEEEccchhh
Confidence 477777776666566652 3799999999999999999999875
No 206
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=95.66 E-value=0.035 Score=44.11 Aligned_cols=58 Identities=16% Similarity=0.137 Sum_probs=42.6
Q ss_pred HHHHHHHhcCCCCCCCCceEEEEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccc
Q psy1628 24 FFERIFLSASLYPFLFLYPCAFFAESL-QSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGR 89 (114)
Q Consensus 24 ~~e~~~~~~~~~~~~~~~iAAviiEPv-~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgR 89 (114)
.+++.+.+. .+..++++-|- +.-.| ...+.+.++++.++|++|++++|.||+..+|..
T Consensus 163 ~l~~~l~~~-------~~~~~i~l~~~~~NPTG-~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~ 221 (405)
T 3k7y_A 163 LFLNDLRNI-------PNGSSVILQISCYNPCS-VNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGH 221 (405)
T ss_dssp HHHHHHHHS-------CSSCEEEECCSSCTTTC-CCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSS
T ss_pred HHHHHHHhC-------CCCeEEEEeCCCCCCCC-CCCCHHHHHHHHHHHHHCCeEEEEecCcccccC
Confidence 455555543 24456777664 33344 467888999999999999999999999998853
No 207
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=95.59 E-value=0.0051 Score=45.90 Aligned_cols=43 Identities=9% Similarity=0.105 Sum_probs=35.7
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh-CCeEEEcccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAA-GGVCVADEVQVG 86 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~-gillI~DEV~tG 86 (114)
.++.++++...+...|...+ ++++.++|++| |+++|.||+++-
T Consensus 129 ~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~p~~~li~D~a~~~ 172 (362)
T 3ffr_A 129 ADAEIICLTHNETSSGVSMP----VEDINTFRDKNKDALIFVDAVSSL 172 (362)
T ss_dssp TTCCEEEEESEETTTTEECC----HHHHTTSGGGSTTSEEEEECTTTT
T ss_pred CCccEEEEEcCCCCcceeCC----HHHHHHHHHhCCCCEEEEeccccc
Confidence 46788888877666676665 88899999999 999999999863
No 208
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=94.97 E-value=0.13 Score=41.42 Aligned_cols=58 Identities=10% Similarity=0.001 Sum_probs=39.7
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHH--hCCeEEEccccccc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRA--AGGVCVADEVQVGF 87 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~--~gillI~DEV~tGf 87 (114)
+.+++.+.++ .++.++++++..+.......+..-++++.++|++ +|+++|+||.+..+
T Consensus 165 e~l~~~i~~~-------~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~ 224 (427)
T 3hvy_A 165 NTVKEELKKD-------DSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEF 224 (427)
T ss_dssp HHHHHHHHHC-------TTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTT
T ss_pred HHHHHHhhCC-------CCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCcccc
Confidence 3456666543 4788999999432111112234568999999999 89999999997543
No 209
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=94.82 E-value=0.16 Score=40.81 Aligned_cols=43 Identities=16% Similarity=0.016 Sum_probs=30.6
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccccc
Q psy1628 42 PCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFG 88 (114)
Q Consensus 42 iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfg 88 (114)
..++++.-.....|.+ +=+++|.++|++||+.+++|+.+.|+-
T Consensus 242 ~~~vv~~~~~t~~G~i----d~l~~I~~la~~~~~~lhvDaA~g~~~ 284 (481)
T 4e1o_A 242 PVFVCATLGTTGVCAF----DCLSELGPICAREGLWLHIDAAYAGTA 284 (481)
T ss_dssp EEEEEEEBSCTTTCCB----CCHHHHHHHHHHHTCEEEEECTTGGGG
T ss_pred cEEEEEecCCCCCcCc----CCHHHHHHHHHHcCCeEEeehhhHHHH
Confidence 4444444433444544 238899999999999999999988753
No 210
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=94.81 E-value=0.16 Score=41.06 Aligned_cols=58 Identities=10% Similarity=0.095 Sum_probs=39.6
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHH--hCCeEEEccccccc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRA--AGGVCVADEVQVGF 87 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~--~gillI~DEV~tGf 87 (114)
+.+++.+.++ .++.++++++..+.-.....+..-++++.++|++ +|+++|+||++.-+
T Consensus 165 e~l~~~l~~~-------~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~ 224 (427)
T 3i16_A 165 EEIEKVLKED-------ESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEF 224 (427)
T ss_dssp HHHHHHHHTC-------TTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTT
T ss_pred HHHHHHhhCC-------CCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccc
Confidence 3455566542 4788999998432111112234568999999999 99999999998644
No 211
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=94.46 E-value=0.064 Score=43.20 Aligned_cols=49 Identities=18% Similarity=0.066 Sum_probs=33.9
Q ss_pred HHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 23 LFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 23 ~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
+.+++.+.+. +..++++ .. ++.+ ...+ +++++++|+++|+++|.||++.
T Consensus 183 d~le~~i~~~--------~tklIi~-~~-sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~ 231 (483)
T 1rv3_A 183 DRLEENARLF--------HPKLIIA-GT-SCYS-RNLD---YGRLRKIADENGAYLMADMAHI 231 (483)
T ss_dssp HHHHHHHHHH--------CCSEEEE-CC-SSCC-SCCC---HHHHHHHHHHTTCEEEEECTTT
T ss_pred HHHHHHHhhc--------CCcEEEE-eC-CcCC-CcCC---HHHHHHHHHHcCCEEEEEccch
Confidence 4566666543 3456676 32 3333 3333 7899999999999999999976
No 212
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=94.40 E-value=0.14 Score=40.91 Aligned_cols=47 Identities=6% Similarity=-0.045 Sum_probs=33.8
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHH--hCCeEEEcccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRA--AGGVCVADEVQVG 86 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~--~gillI~DEV~tG 86 (114)
.+..++++|...|.-.....+..-++++.++|++ +|+++|+||++.-
T Consensus 158 ~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~ 206 (409)
T 3jzl_A 158 PKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGE 206 (409)
T ss_dssp TTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCT
T ss_pred CCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCccc
Confidence 4788999998332111122233568999999999 9999999999753
No 213
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=94.13 E-value=0.27 Score=39.54 Aligned_cols=42 Identities=14% Similarity=-0.008 Sum_probs=29.5
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccc
Q psy1628 42 PCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGF 87 (114)
Q Consensus 42 iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGf 87 (114)
..++++.-.....|.+ +=+++|.++|++||+.+++|+.+.|.
T Consensus 235 ~~~v~~~~~~t~~G~~----~~l~~I~~la~~~~~~lhvD~A~~~~ 276 (475)
T 3k40_A 235 PFYAVVTLGTTNSCAF----DYLDECGPVGNKHNLWIHVDAAYAGS 276 (475)
T ss_dssp EEEEEEEBSCTTTCCB----CCHHHHHHHHHHTTCEEEEECTTGGG
T ss_pred cEEEEEEecCCCCcCc----CCHHHHHHHHHHhCCeEEEeHHhHHH
Confidence 4444444333334544 23789999999999999999998764
No 214
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=93.64 E-value=0.27 Score=38.98 Aligned_cols=44 Identities=5% Similarity=-0.228 Sum_probs=30.2
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGF 87 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGf 87 (114)
.++.++++.......|.+ .-++++.++|+++|+++++||...++
T Consensus 230 ~~~~~vv~~~~nn~tG~i----~~l~~I~~la~~~g~~v~vD~A~~~~ 273 (456)
T 2z67_A 230 GNRPCVLSTLTFFPPRNS----DDIVEIAKICENYDIPHIINGAYAIQ 273 (456)
T ss_dssp TCCEEEEEESSCCTTBCC----CCHHHHHHHHHHHTCCEEEECTTTTT
T ss_pred CCeEEEEEeCCCCCCCCc----CCHHHHHHHHHHcCCcEEEECcchHH
Confidence 355555444332234544 23689999999999999999987655
No 215
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=93.18 E-value=0.35 Score=38.36 Aligned_cols=27 Identities=19% Similarity=0.009 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHhCCeEEEcccccccc
Q psy1628 62 NYLREVYKHVRAAGGVCVADEVQVGFG 88 (114)
Q Consensus 62 ~fl~~lr~lc~~~gillI~DEV~tGfg 88 (114)
+=+++|.++|++||+.+++|+++.|+-
T Consensus 252 ~~l~~I~~la~~~~~~lhvD~a~g~~~ 278 (486)
T 1js3_A 252 DNLLEVGPICHEEDIWLHVDAAYAGSA 278 (486)
T ss_dssp CCHHHHHHHHHHTTCEEEEECTTGGGG
T ss_pred CCHHHHHHHHHHcCCEEEEehhhHHHH
Confidence 448899999999999999999998753
No 216
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=93.09 E-value=0.33 Score=39.01 Aligned_cols=45 Identities=13% Similarity=0.130 Sum_probs=35.4
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccc
Q psy1628 45 FFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGR 89 (114)
Q Consensus 45 viiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgR 89 (114)
+++-+.+++---..++.+.++++.++|+++++++|.||+..||..
T Consensus 193 vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~ 237 (420)
T 4h51_A 193 FILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYAS 237 (420)
T ss_dssp EEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTT
T ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhcc
Confidence 344444444333678899999999999999999999999999954
No 217
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=92.99 E-value=0.19 Score=42.26 Aligned_cols=56 Identities=7% Similarity=-0.121 Sum_probs=39.8
Q ss_pred HHHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccc
Q psy1628 22 HLFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVG 86 (114)
Q Consensus 22 ~~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tG 86 (114)
-+.+|+.++++ ++ +.+++++..|--- ++.. .+=++++.++|++||+.+++||-.=+
T Consensus 202 ~e~le~aI~e~--ga---~~i~~V~~Ttt~y-~p~~---~ddI~eIaeIch~~gIpllVDeAhGa 257 (501)
T 3hl2_A 202 LKAVEAKVQEL--GP---DCILCIHSTTSCF-APRV---PDRLEELAVICANYDIPHIVNNAYGV 257 (501)
T ss_dssp HHHHHHHHHHH--CG---GGEEEEEEECSCC-TTBC---CCCHHHHHHHHHHHTCCEEEECTTCT
T ss_pred HHHHHHHHHhc--CC---CcEEEEEecCCCC-CCcc---cccHHHHHHHHHHcCCeEEEeCcchh
Confidence 45677888876 34 7889988876321 1212 23488999999999999999985543
No 218
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=92.82 E-value=0.11 Score=38.43 Aligned_cols=46 Identities=17% Similarity=0.199 Sum_probs=30.5
Q ss_pred eEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccccccCc
Q psy1628 42 PCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFGRVGT 92 (114)
Q Consensus 42 iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfgRtG~ 92 (114)
..++++.-.+...|...+.+ +++++|+++++ +|+||++.+|+..+.
T Consensus 136 ~~~v~i~~p~nptG~~~~~~----~l~~l~~~~~~-~ivDea~~~~~~~~~ 181 (337)
T 3p1t_A 136 DDCVVLANPSNPTGQALSAG----ELDQLRQRAGK-LLIDETYVDYSSFRA 181 (337)
T ss_dssp TEEEEEESSCTTTCCCCCHH----HHHHHHHHCSE-EEEECTTGGGSSCSS
T ss_pred CCEEEEeCCCCCCCCCCCHH----HHHHHHHhCCc-EEEECCChhhccccc
Confidence 34555555455556555543 57778899997 556999998865553
No 219
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=92.67 E-value=0.23 Score=40.89 Aligned_cols=57 Identities=9% Similarity=-0.143 Sum_probs=40.8
Q ss_pred HHHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccc
Q psy1628 22 HLFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGF 87 (114)
Q Consensus 22 ~~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGf 87 (114)
-+.+++.++++. + +.+++++..|--...| ..+=++++.++|++||+.+++||-.-++
T Consensus 184 ~~~le~aI~~~~--~---~~~~~Vv~t~t~~g~g----~~ddl~~Ia~ia~~~gi~l~VD~A~G~~ 240 (450)
T 3bc8_A 184 LKAVEAKIQELG--P---EHILCLHSTTACFAPR----VPDRLEELAVICANYDIPHVVNNAYGLQ 240 (450)
T ss_dssp HHHHHHHHHHHC--G---GGEEEEEEESSCCTTB----CCCCHHHHHHHHHHHTCCEEEECTTTTT
T ss_pred HHHHHHHHHhcC--C---CCEEEEEEECCcCCCc----eecCHHHHHHHHHHCCCeEEEECCCchh
Confidence 456777887762 2 5789999977433211 2244789999999999999999776554
No 220
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=89.98 E-value=0.6 Score=37.69 Aligned_cols=43 Identities=12% Similarity=0.027 Sum_probs=31.1
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh------CCeEEEccccccc
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAA------GGVCVADEVQVGF 87 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~------gillI~DEV~tGf 87 (114)
+..++++.-.....|.+. -+++|.++|+++ |+++++|+.+.|+
T Consensus 202 ~t~~v~~~~~~n~tG~~~----~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~ 250 (502)
T 3hbx_A 202 NTICVAAILGSTLNGEFE----DVKLLNDLLVEKNKETGWDTPIHVDAASGGF 250 (502)
T ss_dssp TEEEEEEEBSCTTTCCBC----CHHHHHHHHHHHHHHHCCCCCEEEECTTGGG
T ss_pred CCEEEEEecCCCCCCccc----CHHHHHHHHHHhhhccCCCCeEEEECCccch
Confidence 455565554333345443 378899999999 9999999999876
No 221
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=89.84 E-value=0.61 Score=36.57 Aligned_cols=43 Identities=9% Similarity=0.001 Sum_probs=30.9
Q ss_pred ceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHh------CCeEEEccccccc
Q psy1628 41 YPCAFFAESLQSCGGQIIPPANYLREVYKHVRAA------GGVCVADEVQVGF 87 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~------gillI~DEV~tGf 87 (114)
+..++++.-.....|.+. =+++|.++|+++ |+.+++||++.++
T Consensus 187 ~t~~v~~~~~~n~tG~~~----~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~ 235 (452)
T 2dgk_A 187 NTIGVVPTFGVTYTGNYE----FPQPLHDALDKFQADTGIDIDMHIDAASGGF 235 (452)
T ss_dssp TEEEEECBBSCTTTCBBC----CHHHHHHHHHHHHHHHCCCCCEEEECTTGGG
T ss_pred CCEEEEEEcCCcCCcccC----CHHHHHHHHHHHhhccCCCCcEEEEcccHHH
Confidence 455555543333345553 278999999996 9999999999886
No 222
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=89.82 E-value=0.46 Score=41.00 Aligned_cols=38 Identities=13% Similarity=0.098 Sum_probs=28.7
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccc
Q psy1628 43 CAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVG 86 (114)
Q Consensus 43 AAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tG 86 (114)
+.++..|. ..|...+ ++++.++|++||+++++||++.+
T Consensus 315 lvil~~pn--~~G~v~d----l~~I~~ia~~~~~~livDeA~~~ 352 (755)
T 2vyc_A 315 YCVVTNCT--YDGVCYN----AKEAQDLLEKTSDRLHFDEAWYG 352 (755)
T ss_dssp CEEEESSC--TTSEEEC----HHHHHHHHTTTCSEEEEECTTCT
T ss_pred EEEEECCC--CCceecC----HHHHHHHHHHcCCEEEEECcCch
Confidence 44555652 3465543 78999999999999999999975
No 223
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=87.78 E-value=0.38 Score=37.33 Aligned_cols=21 Identities=24% Similarity=0.164 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhCCeEEEccccc
Q psy1628 64 LREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 64 l~~lr~lc~~~gillI~DEV~t 85 (114)
++++.++|+ ||+++|.|++|+
T Consensus 145 ~~~i~~la~-~~~~vi~D~a~a 165 (377)
T 3ju7_A 145 LEEYEELEK-KGVPVVVDAAPG 165 (377)
T ss_dssp CHHHHHHHH-TTCCBEEECTTC
T ss_pred HHHHHHHHh-cCCEEEEECCCc
Confidence 588999999 999999999997
No 224
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=86.56 E-value=1.3 Score=34.52 Aligned_cols=39 Identities=21% Similarity=0.169 Sum_probs=29.1
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEE--Eccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCV--ADEV 83 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI--~DEV 83 (114)
.++.++++.-. ...|.+.+ ++++.++|+++|+++| +|+.
T Consensus 195 ~~t~~v~i~~p-n~tG~~~~----l~~i~~la~~~g~~vivd~d~~ 235 (438)
T 1wyu_A 195 EEVGAVVVQNP-NFLGALED----LGPFAEAAHGAGALFVAVADPL 235 (438)
T ss_dssp TTEEEEEEESS-CTTSBCCC----HHHHHHHHHHTTCEEEEECCTT
T ss_pred CCeEEEEEECC-CCCeEEec----HHHHHHHHHHcCCEEEEEechh
Confidence 46777777763 55566552 8899999999999999 5544
No 225
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=84.86 E-value=0.63 Score=38.23 Aligned_cols=22 Identities=9% Similarity=0.090 Sum_probs=20.8
Q ss_pred HHHHHHHHHHhCCeEEEccccc
Q psy1628 64 LREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 64 l~~lr~lc~~~gillI~DEV~t 85 (114)
+++++++|++||+++++|+++.
T Consensus 220 l~~i~~ia~~~g~~livD~Ah~ 241 (490)
T 2a7v_A 220 YARMREVCDEVKAHLLADMAHI 241 (490)
T ss_dssp HHHHHHHHHHTTCEEEEECGGG
T ss_pred HHHHHHHHHHcCCEEEEccccc
Confidence 8999999999999999999975
No 226
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=84.83 E-value=2.1 Score=36.89 Aligned_cols=38 Identities=24% Similarity=0.177 Sum_probs=28.2
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccc
Q psy1628 43 CAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVG 86 (114)
Q Consensus 43 AAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tG 86 (114)
+.++..|. ..|.+.+ ++++.++|++||+++++||++.+
T Consensus 284 lviv~~pn--~~G~v~d----l~~I~~la~~~g~~livDeAh~~ 321 (730)
T 1c4k_A 284 LAVIQLGT--YDGTIYN----AHEVVKRIGHLCDYIEFDSAWVG 321 (730)
T ss_dssp EEEEESBC--TTSEEEC----HHHHHHHHGGGBSEEEEECTTCC
T ss_pred EEEEECCC--CCCeecC----HHHHHHHHHHcCCeEEEEccccc
Confidence 34444563 2465543 78999999999999999999863
No 227
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=84.80 E-value=0.24 Score=36.86 Aligned_cols=40 Identities=10% Similarity=-0.073 Sum_probs=29.3
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFG 88 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfg 88 (114)
.++.++++.......|...+ +++++||+++|.||+++.+.
T Consensus 140 ~~~k~v~~~~~~nptG~~~~---------~i~~~~~~~li~D~a~~~~~ 179 (360)
T 1w23_A 140 ENDAYLHITSNNTIYGTQYQ---------NFPEINHAPLIADMSSDILS 179 (360)
T ss_dssp TTEEEEEEESEETTTTEECS---------SCCCCCSSCEEEECTTTTTS
T ss_pred CCCCEEEEeCCCCCcceecc---------cccccCCceEEEechhhcCC
Confidence 46788888876666676654 23338999999999998653
No 228
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=62.84 E-value=2.2 Score=32.50 Aligned_cols=42 Identities=10% Similarity=-0.064 Sum_probs=27.1
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFG 88 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfg 88 (114)
.++.++++.......|...+.++.. ++ +|+++|.||+++.+.
T Consensus 164 ~~~~~v~~~~~~nptG~~~~~~~i~----~~---~~~~vivD~a~~~~~ 205 (398)
T 2fyf_A 164 PSVDVIAWAHNETSTGVAVAVRRPE----GS---DDALVVIDATSGAGG 205 (398)
T ss_dssp TTCSEEEEESEETTTTEECCCCCCT----TC---C-CEEEEECTTTTTT
T ss_pred CCCCEEEEeCcCCCcceecchHHhh----hh---cCCeEEEEeccccCC
Confidence 4566777776555567666544332 22 899999999998553
No 229
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=59.10 E-value=29 Score=24.55 Aligned_cols=37 Identities=14% Similarity=0.163 Sum_probs=25.8
Q ss_pred EEEEEcccCCC---CC-cccCCHHHHHHHHHHHHHhCCeEE
Q psy1628 43 CAFFAESLQSC---GG-QIIPPANYLREVYKHVRAAGGVCV 79 (114)
Q Consensus 43 AAviiEPv~g~---gG-~~~~~~~fl~~lr~lc~~~gillI 79 (114)
--+++.|.+-. .| .......|-+.++++|+++|+.+|
T Consensus 127 ~vil~tp~p~~~~~~~~~~~~~~~y~~~~~~vA~~~~v~~i 167 (233)
T 1k7c_A 127 KVILSSQTPNNPWETGTFVNSPTRFVEYAELAAEVAGVEYV 167 (233)
T ss_dssp EEEEECCCCCCTTTTSSCCCCCCHHHHHHHHHHHHHTCEEE
T ss_pred EEEEECCCCccccCCCccccchHHHHHHHHHHHHHhCCeEE
Confidence 45777776432 13 224456899999999999998776
No 230
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=56.91 E-value=18 Score=31.29 Aligned_cols=54 Identities=15% Similarity=0.183 Sum_probs=33.3
Q ss_pred HHHHHHHHHhcCCCCCCCCce-EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccc
Q psy1628 22 HLFFERIFLSASLYPFLFLYP-CAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGF 87 (114)
Q Consensus 22 ~~~~e~~~~~~~~~~~~~~~i-AAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGf 87 (114)
-+.+++.++++. .. ... +.++..| .-.|...+ ++++.++|++++ +|+||.+.+.
T Consensus 282 ~e~Le~~l~~~~-~~---k~p~~vivt~p--n~~G~v~d----l~~I~ela~~~~--livDEAH~~~ 336 (715)
T 3n75_A 282 HATIAKRVKETP-NA---TWPVHAVITNS--TYDGLLYN----TDFIKKTLDVKS--IHFDSAWVPY 336 (715)
T ss_dssp HHHHHHHHHHST-TC---CSCSEEEEESS--CTTSEEEC----HHHHHHHCCCSE--EEEECTTCTT
T ss_pred HHHHHHHHhhCc-Cc---cCceEEEEECC--CCCCccCC----HHHHHHHhCcCc--EEEccccccc
Confidence 456777777642 00 111 5677778 33465543 467788887764 7999999743
No 231
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=53.79 E-value=10 Score=28.27 Aligned_cols=20 Identities=10% Similarity=0.117 Sum_probs=16.4
Q ss_pred HHHHHHHHHHhCCeEEE-ccc
Q psy1628 64 LREVYKHVRAAGGVCVA-DEV 83 (114)
Q Consensus 64 l~~lr~lc~~~gillI~-DEV 83 (114)
.+.++++|++||+.||+ |.+
T Consensus 85 a~~l~~l~~~~~~~liInd~~ 105 (243)
T 3o63_A 85 CEILADAAHRYGALFAVNDRA 105 (243)
T ss_dssp HHHHHHHHHHTTCEEEEESCH
T ss_pred HHHHHHHHHhhCCEEEEeCHH
Confidence 37788999999998888 444
No 232
>1jzt_A Hypothetical 27.5 kDa protein in SPX19-GCR2 inter region; yeast hypothetical protein, structural genomics, selenomethi PSI; 1.94A {Saccharomyces cerevisiae} SCOP: c.104.1.1
Probab=51.35 E-value=39 Score=25.10 Aligned_cols=61 Identities=10% Similarity=0.080 Sum_probs=41.7
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhC--CeEEEccccccc-cccCccchhhhhcCCCCCcCEEE
Q psy1628 43 CAFFAESLQSCGGQIIPPANYLREVYKHVRAAG--GVCVADEVQVGF-GRVGTHWWAFQLQGDDIIPDIVT 110 (114)
Q Consensus 43 AAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~g--illI~DEV~tGf-gRtG~~~~~~~~~g~~v~PDivt 110 (114)
+-+|+|.+.|.|--.++ .+.++.+.++..+.+ ..+++=+|=+|+ .-||. ..+ .. +++|+++
T Consensus 133 ~dliIDaLfG~Gl~~~l-~~~~~~~I~~iN~~~~~~~vvAvDiPSGl~~dtG~-~~g---~a--v~Ad~Tv 196 (246)
T 1jzt_A 133 TLCIVDAIFGFSFKPPM-REPFKGIVEELCKVQNIIPIVSVDVPTGWDVDKGP-ISQ---PS--INPAVLV 196 (246)
T ss_dssp EEEEEEESCCTTCCSSC-CTTHHHHHHHHHHHTTTSCEEEESSCTTSBTTTBC-CSS---SC--CCCSEEE
T ss_pred CcEEEEecccCCCCCCC-cHHHHHHHHHHHhcCCCCCEEEEECCCCccCCCCC-cCC---Ce--EcCCEEE
Confidence 58999999998554444 455556666677777 777776799999 45675 221 23 8888765
No 233
>3p8k_A Hydrolase, carbon-nitrogen family; HET: PGE; 1.70A {Staphylococcus aureus subsp}
Probab=50.86 E-value=66 Score=23.63 Aligned_cols=55 Identities=7% Similarity=-0.155 Sum_probs=36.0
Q ss_pred HHHHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCccc---------CCHHHHHHHHHHHHHhCCeEEEc
Q psy1628 21 VHLFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQII---------PPANYLREVYKHVRAAGGVCVAD 81 (114)
Q Consensus 21 ~~~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~---------~~~~fl~~lr~lc~~~gillI~D 81 (114)
..+.+++++++.. .+=|-+|+=|...-.|... .+..+++.++++++++++.+|+=
T Consensus 38 Nl~~~~~~i~~A~------~~gadlvvfPE~~l~gy~~~~~~~~a~~~~~~~~~~l~~la~~~~i~iv~G 101 (281)
T 3p8k_A 38 NETQITQWFEKNM------NAEVDVVVLPEMWNNGYDLEHLNEKADNNLGQSFSFIKHLAEKYKVDIVAG 101 (281)
T ss_dssp HHHHHHHHHHHHC------CTTCCEEECCSSTTTTTCGGGHHHHSEETTHHHHHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHHHHH------hCCCcEEEcCCCccCCCChhHHHHhhhccCcHHHHHHHHHHhhCCeEEEEe
Confidence 3344455555432 2224578888776555443 24678999999999999987753
No 234
>2o8n_A APOA-I binding protein; rossmann fold, protein binding; 2.00A {Mus musculus} PDB: 2dg2_A
Probab=47.54 E-value=35 Score=25.89 Aligned_cols=59 Identities=10% Similarity=0.104 Sum_probs=42.6
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccccc-cccCccchhhhhcCCCCCcCEEE
Q psy1628 43 CAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGF-GRVGTHWWAFQLQGDDIIPDIVT 110 (114)
Q Consensus 43 AAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGf-gRtG~~~~~~~~~g~~v~PDivt 110 (114)
+-+|+|.+.|.|--.++ .+.++.+.++..+.+..+++=+|=+|+ .-||. .. . +++|+++
T Consensus 151 ~dlIIDALfGtGl~~~l-~~~~~~lI~~iN~~~~~VvAVDIPSGldadtG~-~~-----a--v~Ad~TV 210 (265)
T 2o8n_A 151 YELVVDAIFGFSFKGDV-REPFHSILSVLSGLTVPIASIDIPSGWDVEKGN-PS-----G--IQPDLLI 210 (265)
T ss_dssp CSEEEEESCCTTCCCCC-CTTHHHHHHHHHTCSSCEEEESSCTTSBTTTBC-TT-----S--CCCSEEE
T ss_pred CcEEEEeeccCCCCCCC-cHHHHHHHHHHHhcCCCEEEEeCCCCcccCCCC-cC-----e--eeCCEEE
Confidence 46999999997654444 455566667778888888877799999 45776 22 4 8899765
No 235
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi}
Probab=47.46 E-value=15 Score=26.77 Aligned_cols=25 Identities=20% Similarity=0.126 Sum_probs=19.4
Q ss_pred HHHHHHHHHHHHHh-CCeEEEccccc
Q psy1628 61 ANYLREVYKHVRAA-GGVCVADEVQV 85 (114)
Q Consensus 61 ~~fl~~lr~lc~~~-gillI~DEV~t 85 (114)
.++++.+.+++++. ..++++||+|.
T Consensus 114 ~~~~~~l~~~~~~~~~~vlvlDe~~~ 139 (350)
T 2qen_A 114 REVFRELNDLGEELGEFIVAFDEAQY 139 (350)
T ss_dssp HHHHHHHHHHHHHHSCEEEEEETGGG
T ss_pred HHHHHHHHHHHhccCCEEEEEeCHHH
Confidence 45667777777654 78999999997
No 236
>3vup_A Beta-1,4-mannanase; TIM barrel, digestive fluid, HYD; 1.05A {Aplysia kurodai}
Probab=45.80 E-value=17 Score=25.86 Aligned_cols=22 Identities=0% Similarity=0.013 Sum_probs=17.5
Q ss_pred HHHHHHHHHHhCCeEEEccccc
Q psy1628 64 LREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 64 l~~lr~lc~~~gillI~DEV~t 85 (114)
+..+.++|+++|+.+|+|.-..
T Consensus 92 ~d~~~~~a~~~Gi~vil~~~~~ 113 (351)
T 3vup_A 92 MKDLLDTAKKYNILVFPCLWNA 113 (351)
T ss_dssp HHHHHHHHHHTTCEEEEEEEEC
T ss_pred HHHHHHHHHHCCCeEEEEeccc
Confidence 4567789999999999986443
No 237
>3bww_A Protein of unknown function DUF692/COG3220; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.20A {Haemophilus somnus}
Probab=45.71 E-value=23 Score=27.90 Aligned_cols=40 Identities=18% Similarity=0.233 Sum_probs=33.1
Q ss_pred EEEccc-CCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccc
Q psy1628 45 FFAESL-QSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQ 84 (114)
Q Consensus 45 viiEPv-~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~ 84 (114)
+++..+ .+=||..+++.+|++++++++++++..++-|-.-
T Consensus 57 l~~HGv~LSlG~~~pld~~~L~~lk~l~~~~~~~~~SeHL~ 97 (307)
T 3bww_A 57 ILIHGLSLSLGGQAPLDKELLSSIKAMIKQYNTPFFSDHLS 97 (307)
T ss_dssp EEEBCSCCCTTCSSCCCHHHHHHHHHHHHHTTCCCCEECSC
T ss_pred EEEeeccccccCCCCCCHHHHHHHHHHHHHHCCCEEEeeee
Confidence 555555 4447888999999999999999999999999653
No 238
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=42.93 E-value=1e+02 Score=23.02 Aligned_cols=30 Identities=20% Similarity=0.212 Sum_probs=25.9
Q ss_pred ccCCHHHHHHHHHHHHHhCCeEEEcccccc
Q psy1628 57 IIPPANYLREVYKHVRAAGGVCVADEVQVG 86 (114)
Q Consensus 57 ~~~~~~fl~~lr~lc~~~gillI~DEV~tG 86 (114)
..|++.-++++.+.++++++-.||-|-+.-
T Consensus 210 ~eps~~~l~~l~~~ik~~~v~~if~e~~~~ 239 (286)
T 3gi1_A 210 QEPSPRQLKEIQDFVKEYNVKTIFAEDNVN 239 (286)
T ss_dssp --CCHHHHHHHHHHHHHTTCCEEEECTTSC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCC
Confidence 368899999999999999999999998863
No 239
>4a1f_A DNAB helicase, replicative DNA helicase; hydrolase, DNA replication, ATPase; HET: FLC; 2.50A {Helicobacter pylori}
Probab=40.78 E-value=73 Score=24.74 Aligned_cols=40 Identities=23% Similarity=0.077 Sum_probs=29.1
Q ss_pred ceEEEEEcccCCCCC-c-----ccCCHHHHHHHHHHHHHhCCeEEE
Q psy1628 41 YPCAFFAESLQSCGG-Q-----IIPPANYLREVYKHVRAAGGVCVA 80 (114)
Q Consensus 41 ~iAAviiEPv~g~gG-~-----~~~~~~fl~~lr~lc~~~gillI~ 80 (114)
.+..+|+|.+|--.+ . ...-.++.+.|+.+++++++.+|+
T Consensus 156 g~~lIVIDyLqlm~~~~~~~~r~~ei~~isr~LK~lAkel~vpVi~ 201 (338)
T 4a1f_A 156 ELGIAFIDYLQLMSGSKATKERHEQIAEISRELKTLARELEIPIIA 201 (338)
T ss_dssp TEEEEEEEEEECCCTHHHHHHCCCCHHHHHHHHHHHHHHHTSCEEE
T ss_pred CCCEEEEechHHhcCCCCCCChHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 799999999875211 1 112246788999999999997766
No 240
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=38.64 E-value=71 Score=22.97 Aligned_cols=39 Identities=13% Similarity=-0.023 Sum_probs=28.6
Q ss_pred EEEEEcccCCCCCcccC-------------CHHHHHHHHHHHHHhCCeEEEc
Q psy1628 43 CAFFAESLQSCGGQIIP-------------PANYLREVYKHVRAAGGVCVAD 81 (114)
Q Consensus 43 AAviiEPv~g~gG~~~~-------------~~~fl~~lr~lc~~~gillI~D 81 (114)
|-+|+=|.....|.... +..+++.++++++++++.+|+=
T Consensus 35 adlvvfPE~~~~gy~~~~~~~~~~~a~~~~~~~~~~~l~~~a~~~~~~iv~G 86 (262)
T 3ivz_A 35 AQLVVLPELFDTGYNFETREEVFEIAQKIPEGETTTFLMDVARDTGVYIVAG 86 (262)
T ss_dssp CSEEECCTTTTTCSCCSCHHHHHHHCBCTTTSHHHHHHHHHHHHHCCEEEEE
T ss_pred CCEEEeCCCcccCCCCCCHHHHHHhcCccCCCHHHHHHHHHHHHcCcEEEEe
Confidence 34778787665565432 3378999999999999988764
No 241
>2q6t_A DNAB replication FORK helicase; hydrolase; 2.90A {Thermus aquaticus}
Probab=37.24 E-value=1e+02 Score=24.21 Aligned_cols=40 Identities=20% Similarity=0.061 Sum_probs=27.2
Q ss_pred ceEEEEEcccCCCCCc----ccCC-----HHHHHHHHHHHHHhCCeEEE
Q psy1628 41 YPCAFFAESLQSCGGQ----IIPP-----ANYLREVYKHVRAAGGVCVA 80 (114)
Q Consensus 41 ~iAAviiEPv~g~gG~----~~~~-----~~fl~~lr~lc~~~gillI~ 80 (114)
.+..+|+|.++.-.+. .... ..+.+.|+.+++++++.+|+
T Consensus 310 ~~~lIvID~l~~~~~~~~~~~~~~r~~~i~~i~~~Lk~lAke~~v~vi~ 358 (444)
T 2q6t_A 310 QVGLIIIDYLQLMSGPGSGKSGENRQQEIAAISRGLKALARELGIPIIA 358 (444)
T ss_dssp CCCEEEEECGGGCBCC-------CHHHHHHHHHHHHHHHHHHHTSCEEE
T ss_pred CCCEEEEcChhhcCCCcCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 5778999998753211 0011 36778899999999986665
No 242
>7a3h_A Endoglucanase; hydrolase, cellulose degradation, glycoside H family 5, michaelis complex, SKEW-BOAT, distortion; 0.95A {Bacillus agaradhaerens} SCOP: c.1.8.3 PDB: 1h2j_A* 1hf6_A* 1ocq_A* 1w3k_A* 1h11_A* 4a3h_A* 5a3h_A* 6a3h_A* 1w3l_A 8a3h_A* 2v38_A* 1qhz_A 1qi0_A* 1e5j_A* 1qi2_A* 1h5v_A* 1a3h_A 2a3h_A* 3a3h_A* 1lf1_A
Probab=37.10 E-value=27 Score=25.96 Aligned_cols=25 Identities=8% Similarity=-0.035 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
.+.++++.++|+++|+.+|+|==..
T Consensus 79 ~~~ld~~v~~a~~~Gi~Vild~H~~ 103 (303)
T 7a3h_A 79 KEKVKEAVEAAIDLDIYVIIDWHIL 103 (303)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccc
Confidence 4566777899999999999985443
No 243
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=36.77 E-value=28 Score=25.71 Aligned_cols=23 Identities=13% Similarity=-0.061 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHhCCeEEEccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEV 83 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV 83 (114)
-+.+..+.++|+++|+.+|+|=.
T Consensus 89 ~~~ld~~i~~a~~~Gi~vild~~ 111 (344)
T 1qnr_A 89 LQTLDYVVQSAEQHNLKLIIPFV 111 (344)
T ss_dssp THHHHHHHHHHHHHTCEEEEESC
T ss_pred HHHHHHHHHHHHHCCCEEEEEec
Confidence 56778899999999999999854
No 244
>3bh0_A DNAB-like replicative helicase; ATPase, replication; 2.35A {Bacillus phage SPP1}
Probab=36.32 E-value=1.2e+02 Score=22.57 Aligned_cols=44 Identities=16% Similarity=0.118 Sum_probs=28.3
Q ss_pred ceE--EEEEcccCCCC-CcccCC-----HHHHHHHHHHHHHhCCeEEE-cccc
Q psy1628 41 YPC--AFFAESLQSCG-GQIIPP-----ANYLREVYKHVRAAGGVCVA-DEVQ 84 (114)
Q Consensus 41 ~iA--AviiEPv~g~g-G~~~~~-----~~fl~~lr~lc~~~gillI~-DEV~ 84 (114)
.+. .+|+|.++.-. ...... ..+.+.|+.+++++|+.+|+ -++.
T Consensus 179 ~~~~~lVVID~l~~l~~~~~~~~r~~~i~~~~~~Lk~lAk~~~i~vi~lsql~ 231 (315)
T 3bh0_A 179 PGKRVIVMIDYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIALSQLS 231 (315)
T ss_dssp SSCCEEEEEECGGGSBCSCTTSCHHHHHHHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred CCCCeEEEEeCchhcCCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEEEeecC
Confidence 345 89999986521 111111 35678899999999996655 4544
No 245
>3pzt_A Endoglucanase; alpha/beta barrel, glycosyl hydrolase, cellulose binding, HY; 1.97A {Bacillus subtilis subsp} PDB: 3pzu_A 3pzv_A
Probab=36.01 E-value=29 Score=26.41 Aligned_cols=53 Identities=15% Similarity=-0.039 Sum_probs=31.0
Q ss_pred HHHHHHHHHhcCCCCCCCCceEEEEEcccCCCCCcccC--CHHHHHHHHHHHHHhCCeEEEcc
Q psy1628 22 HLFFERIFLSASLYPFLFLYPCAFFAESLQSCGGQIIP--PANYLREVYKHVRAAGGVCVADE 82 (114)
Q Consensus 22 ~~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG~~~~--~~~fl~~lr~lc~~~gillI~DE 82 (114)
.+.++++.++. +- +-|-.-+... .+|.... -.+.++++.++|+++|+.+|+|=
T Consensus 71 ~~~~~~l~~~~--G~---N~VRi~~~~~---~~~~~~~~~~~~~ld~~v~~a~~~Gi~VilD~ 125 (327)
T 3pzt_A 71 KDSLKWLRDDW--GI---TVFRAAMYTA---DGGYIDNPSVKNKVKEAVEAAKELGIYVIIDW 125 (327)
T ss_dssp HHHHHHHHHHT--CC---SEEEEEEESS---TTSTTTCGGGHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHhc--CC---CEEEEEeEEC---CCCcccCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 44566665554 22 4454444422 2232211 23566777799999999999984
No 246
>1q57_A DNA primase/helicase; dntpase, DNA replication, transferase; HET: DNA; 3.45A {Enterobacteria phage T7} SCOP: c.37.1.11 e.13.1.2
Probab=35.50 E-value=1.3e+02 Score=23.90 Aligned_cols=45 Identities=11% Similarity=0.059 Sum_probs=29.6
Q ss_pred CceEEEEEcccCCCC-CcccCC-----HHHHHHHHHHHHHhCCeEEE-cccc
Q psy1628 40 LYPCAFFAESLQSCG-GQIIPP-----ANYLREVYKHVRAAGGVCVA-DEVQ 84 (114)
Q Consensus 40 ~~iAAviiEPv~g~g-G~~~~~-----~~fl~~lr~lc~~~gillI~-DEV~ 84 (114)
..+..+|+|+++.-. +..... ..+++.|+.+++++|+.+|+ -++.
T Consensus 353 ~~~~lvVID~l~~l~~~~~~~~~~~~~~~~~~~Lk~lak~~~i~vi~~~q~~ 404 (503)
T 1q57_A 353 LGCDVIILDHISIVVSASGESDERKMIDNLMTKLKGFAKSTGVVLVVICHLK 404 (503)
T ss_dssp TCCSEEEEECTTCCCSCCSCCCHHHHHHHHHHHHHHHHHHHTCEEEEEEECC
T ss_pred cCCCEEEEccchhcCCCCCCCCHHHHHHHHHHHHHHHHHHHCCeEEEEEcCC
Confidence 357799999987521 110012 35788999999999996665 4443
No 247
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=35.22 E-value=33 Score=25.20 Aligned_cols=22 Identities=9% Similarity=0.218 Sum_probs=20.4
Q ss_pred CHHHHHHHHHHHHHhCCeEEEc
Q psy1628 60 PANYLREVYKHVRAAGGVCVAD 81 (114)
Q Consensus 60 ~~~fl~~lr~lc~~~gillI~D 81 (114)
+.+.++++.++|+++|+.+|+|
T Consensus 63 ~~~~ld~~v~~a~~~Gi~Vild 84 (302)
T 1bqc_A 63 GPSDVANVISLCKQNRLICMLE 84 (302)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEE
Confidence 5688999999999999999999
No 248
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=34.70 E-value=1e+02 Score=23.03 Aligned_cols=30 Identities=20% Similarity=0.214 Sum_probs=27.4
Q ss_pred ccCCHHHHHHHHHHHHHhCCeEEEcccccc
Q psy1628 57 IIPPANYLREVYKHVRAAGGVCVADEVQVG 86 (114)
Q Consensus 57 ~~~~~~fl~~lr~lc~~~gillI~DEV~tG 86 (114)
..|++.-++++.+.++++++-.||-|-+..
T Consensus 219 ~eps~~~l~~l~~~ik~~~v~~If~e~~~~ 248 (291)
T 1pq4_A 219 QEPSAQELKQLIDTAKENNLTMVFGETQFS 248 (291)
T ss_dssp BCCCHHHHHHHHHHHHTTTCCEEEEETTSC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCC
Confidence 578999999999999999999999998864
No 249
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=34.50 E-value=41 Score=20.70 Aligned_cols=27 Identities=11% Similarity=-0.087 Sum_probs=22.0
Q ss_pred CCHHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 59 PPANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 59 ~~~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
.+++....+..+|+++++.++.-.-..
T Consensus 37 ~~~~~~~~i~~lc~~~~Ip~~~v~sk~ 63 (82)
T 3v7e_A 37 ADPILTSSVVSLAEDQGISVSMVESMK 63 (82)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEESCHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCHH
Confidence 344899999999999999998865444
No 250
>3zs7_A Pyridoxal kinase; transferase, sleeping sickness; HET: ATP; 2.00A {Trypanosoma brucei}
Probab=34.33 E-value=14 Score=27.97 Aligned_cols=34 Identities=15% Similarity=0.104 Sum_probs=16.7
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCC
Q psy1628 43 CAFFAESLQSCGGQIIPPANYLREVYKHVRAAGG 76 (114)
Q Consensus 43 AAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gi 76 (114)
.-+++||+++..|-...+++..+.+++++...++
T Consensus 112 ~~vv~DPVm~d~G~~~~~~~~~~~~~~Ll~~adi 145 (300)
T 3zs7_A 112 LTFICDPVMGDDGIMYCKKEVLDAYRELVPLADI 145 (300)
T ss_dssp CEEEECCCC---------CTHHHHHHHHGGGCSE
T ss_pred ceEEEccccccCCCeecCHHHHHHHHHHhhhCCE
Confidence 3578899888656455566677766665554443
No 251
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=34.05 E-value=34 Score=26.37 Aligned_cols=25 Identities=16% Similarity=0.157 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
++=|+.+.+.|+++|+-+|+|=|..
T Consensus 76 ~~df~~lv~~aH~~Gi~VilD~V~N 100 (496)
T 4gqr_A 76 EDEFRNMVTRCNNVGVRIYVDAVIN 100 (496)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccC
Confidence 4458899999999999999998865
No 252
>1tvn_A Cellulase, endoglucanase G; glycoside hydrolase, CLAN GH-A, family 5-2; 1.41A {Pseudoalteromonas haloplanktis} SCOP: c.1.8.3 PDB: 1tvp_A*
Probab=34.03 E-value=32 Score=25.19 Aligned_cols=22 Identities=18% Similarity=0.028 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHhCCeEEEccc
Q psy1628 62 NYLREVYKHVRAAGGVCVADEV 83 (114)
Q Consensus 62 ~fl~~lr~lc~~~gillI~DEV 83 (114)
+.++++.++|+++|+.+|+|--
T Consensus 79 ~~ld~~v~~a~~~Gi~vild~h 100 (293)
T 1tvn_A 79 SRLDTVVNAAIAEDMYVIIDFH 100 (293)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEcC
Confidence 4556677899999999999843
No 253
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=33.17 E-value=28 Score=28.98 Aligned_cols=22 Identities=5% Similarity=-0.009 Sum_probs=17.9
Q ss_pred HHHHHHHHHHHHHhCCeEEEcc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADE 82 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DE 82 (114)
....++++++|++||+.||+++
T Consensus 55 ~~~a~~l~~l~~~~~v~liIND 76 (540)
T 3nl6_A 55 IEEALQIKELCHAHNVPLIIND 76 (540)
T ss_dssp HHHHHHHHHHHHHTTCCEEECS
T ss_pred HHHHHHHHHHHHhcCCEEEEeC
Confidence 3456778899999999999865
No 254
>1egz_A Endoglucanase Z, EGZ, CEL5; glycosyl hydrolase, CLAN GH-A, family 5-2, cellulase; 2.30A {Erwinia chrysanthemi} SCOP: c.1.8.3
Probab=31.94 E-value=36 Score=24.79 Aligned_cols=21 Identities=10% Similarity=-0.059 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHhCCeEEEcc
Q psy1628 62 NYLREVYKHVRAAGGVCVADE 82 (114)
Q Consensus 62 ~fl~~lr~lc~~~gillI~DE 82 (114)
+.++++.++|+++|+.+|+|=
T Consensus 77 ~~ld~~v~~a~~~Gi~vild~ 97 (291)
T 1egz_A 77 AKVERVVDAAIANDMYAIIGW 97 (291)
T ss_dssp HHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHCCCEEEEEc
Confidence 456677789999999999984
No 255
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=31.16 E-value=59 Score=21.97 Aligned_cols=28 Identities=21% Similarity=0.169 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHhCC---eEEEcccccccc
Q psy1628 61 ANYLREVYKHVRAAGG---VCVADEVQVGFG 88 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gi---llI~DEV~tGfg 88 (114)
.+..+.+.+...+++. ++|+||..++++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~llilDe~~~~~~ 137 (235)
T 2w0m_A 107 EELVNKVIEAKQKLGYGKARLVIDSVSALFL 137 (235)
T ss_dssp HHHHHHHHHHHHHHCSSCEEEEEETGGGGSS
T ss_pred HHHHHHHHHHHHhhCCCceEEEEECchHhhc
Confidence 3455666777766665 899999998873
No 256
>3bgw_A DNAB-like replicative helicase; ATPase, replication; 3.91A {Bacillus phage SPP1}
Probab=31.16 E-value=1.4e+02 Score=23.69 Aligned_cols=40 Identities=18% Similarity=0.095 Sum_probs=27.0
Q ss_pred ceE--EEEEcccCCCC-CcccCC-----HHHHHHHHHHHHHhCCeEEE
Q psy1628 41 YPC--AFFAESLQSCG-GQIIPP-----ANYLREVYKHVRAAGGVCVA 80 (114)
Q Consensus 41 ~iA--AviiEPv~g~g-G~~~~~-----~~fl~~lr~lc~~~gillI~ 80 (114)
.+. .+|+|+++.-. ...... ..+.+.|+.+++++|+.+|+
T Consensus 308 ~~~~~lIVID~Lq~~~~~~~~~~r~~~i~~i~~~Lk~lAke~~v~vi~ 355 (444)
T 3bgw_A 308 PGKRVIVMIDYLQLLEPAKANDSRTNQISQISRDLKKMARELDVVVIA 355 (444)
T ss_dssp CSSCEEEEEECSTTSBCSCSSSCHHHHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCeEEEEecHHhccCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 455 89999987521 110112 35667899999999997766
No 257
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=30.89 E-value=59 Score=25.38 Aligned_cols=31 Identities=16% Similarity=0.085 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccccccccC
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQVGFGRVG 91 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~tGfgRtG 91 (114)
.+=++++.+.|+++|+-+|+|=|..=.+...
T Consensus 69 ~~df~~lv~~aH~~Gi~VilD~V~NH~~~~~ 99 (441)
T 1lwj_A 69 EREFKEMIEAFHDSGIKVVLDLPIHHTGFLH 99 (441)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCCTTC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCcccCch
Confidence 5568888899999999999999976444433
No 258
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=30.72 E-value=37 Score=25.90 Aligned_cols=23 Identities=17% Similarity=0.059 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHhCCeEEEccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEV 83 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV 83 (114)
.+.++++.++|+++|+.+|+|=-
T Consensus 120 l~~ld~~v~~a~~~Gi~Vild~H 142 (359)
T 4hty_A 120 LELLDQVVAWNNELGIYTILDWH 142 (359)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEcC
Confidence 34557788999999999999843
No 259
>2c0h_A Mannan endo-1,4-beta-mannosidase; hydrolase, signal, TIM alpha/beta barrel; 1.6A {Mytilus edulis} SCOP: c.1.8.3
Probab=30.55 E-value=39 Score=25.02 Aligned_cols=20 Identities=5% Similarity=-0.016 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHhCCeEEEc
Q psy1628 62 NYLREVYKHVRAAGGVCVAD 81 (114)
Q Consensus 62 ~fl~~lr~lc~~~gillI~D 81 (114)
+.+.++.++|+++|+.+|+|
T Consensus 91 ~~ld~~~~~a~~~Gi~vil~ 110 (353)
T 2c0h_A 91 SDMRAYLHAAQRHNILIFFT 110 (353)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCEEEEE
Confidence 35677889999999999985
No 260
>2whl_A Beta-mannanase, baman5; glycoside hydrolase, hydrolase; HET: MAN BMA; 1.40A {Bacillus agaradhaerens} PDB: 2whj_A
Probab=30.16 E-value=40 Score=24.72 Aligned_cols=24 Identities=21% Similarity=0.207 Sum_probs=20.7
Q ss_pred CCHHHHHHHHHHHHHhCCeEEEcc
Q psy1628 59 PPANYLREVYKHVRAAGGVCVADE 82 (114)
Q Consensus 59 ~~~~fl~~lr~lc~~~gillI~DE 82 (114)
.+.+.++++.++|+++|+.+|+|=
T Consensus 61 ~~~~~ld~~v~~a~~~Gi~Vild~ 84 (294)
T 2whl_A 61 DDIDTIREVIELAEQNKMVAVVEV 84 (294)
T ss_dssp CCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred cHHHHHHHHHHHHHHCCCEEEEEe
Confidence 356788899999999999999983
No 261
>2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58}
Probab=29.63 E-value=24 Score=25.19 Aligned_cols=17 Identities=24% Similarity=0.380 Sum_probs=14.1
Q ss_pred HHHhCCeEEEccccccc
Q psy1628 71 VRAAGGVCVADEVQVGF 87 (114)
Q Consensus 71 c~~~gillI~DEV~tGf 87 (114)
.+..+.++|+||.|.=|
T Consensus 84 ~~~~~~vliIDEAq~l~ 100 (199)
T 2r2a_A 84 PENIGSIVIVDEAQDVW 100 (199)
T ss_dssp GGGTTCEEEETTGGGTS
T ss_pred cccCceEEEEEChhhhc
Confidence 45679999999999854
No 262
>1f89_A 32.5 kDa protein YLR351C; nitrilase, dimer, structural genomics, four layer sandwich, PSI, protein structure initiative; 2.40A {Saccharomyces cerevisiae} SCOP: d.160.1.1
Probab=29.50 E-value=1.5e+02 Score=21.40 Aligned_cols=38 Identities=5% Similarity=-0.117 Sum_probs=28.1
Q ss_pred EEEEEcccCCCCCccc-----------CC--HHHHHHHHHHHHHhCCeEEE
Q psy1628 43 CAFFAESLQSCGGQII-----------PP--ANYLREVYKHVRAAGGVCVA 80 (114)
Q Consensus 43 AAviiEPv~g~gG~~~-----------~~--~~fl~~lr~lc~~~gillI~ 80 (114)
+-+|+=|.....|... ++ ..+++.++++++++++.+++
T Consensus 46 adlvv~PE~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~ 96 (291)
T 1f89_A 46 TKLVVLPECFNSPYSTDQFRKYSEVINPKEPSTSVQFLSNLANKFKIILVG 96 (291)
T ss_dssp EEEEECCTTTTSCSCHHHHHHHTTBCCSSSCCHHHHHHHHHHHHSSCEEEC
T ss_pred CeEEEcCCCcccCCChHHHHHHhhhhccCCCChHHHHHHHHHHHcCcEEEe
Confidence 5688888766545321 12 56899999999999998775
No 263
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=29.27 E-value=1.3e+02 Score=24.76 Aligned_cols=61 Identities=16% Similarity=0.230 Sum_probs=44.0
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccccccc-ccCccchhhhhcCCCCCcCEEE
Q psy1628 43 CAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQVGFG-RVGTHWWAFQLQGDDIIPDIVT 110 (114)
Q Consensus 43 AAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfg-RtG~~~~~~~~~g~~v~PDivt 110 (114)
+-+|+|.+.|.|-- .+..+.++.+.+++.+.+..+++=+|=+|+- -||. ..+ .. +++|.++
T Consensus 121 ~dliVDalfG~Gl~-~~l~~~~~~~i~~iN~~~~~vvAvDiPSGl~~dtG~-~~g---~a--v~Ad~Tv 182 (502)
T 3rss_A 121 FDVVVDAIFGTGLR-GEITGEYAEIINLVNKSGKVVVSVDVPSGIDSNTGK-VLR---TA--VKADLTV 182 (502)
T ss_dssp CSEEEEESCSTTCC-SCCCHHHHHHHHHHHTTCCEEEEESSCTTBCTTTCC-BSS---CC--CCCSEEE
T ss_pred CCEEEEeCccCCCC-CCCcHHHHHHHHHHHcCCCCEEEecCCCCccCCCCC-cCC---Ce--eeCCEEE
Confidence 45899999997544 4455566677777888899999888999994 5775 221 23 7888765
No 264
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=28.92 E-value=1.1e+02 Score=20.85 Aligned_cols=57 Identities=7% Similarity=-0.221 Sum_probs=30.2
Q ss_pred HHHHHHHHHhcCCCCCCCCceEEEEEc-ccCCCCCcccCCHHHHHHHHHHHHHhCC-eEEEcccccc
Q psy1628 22 HLFFERIFLSASLYPFLFLYPCAFFAE-SLQSCGGQIIPPANYLREVYKHVRAAGG-VCVADEVQVG 86 (114)
Q Consensus 22 ~~~~e~~~~~~~~~~~~~~~iAAviiE-Pv~g~gG~~~~~~~fl~~lr~lc~~~gi-llI~DEV~tG 86 (114)
.+.+.++++++ ++..++++ |...+|-.......--.-++.+.+++++ +...||=.|-
T Consensus 44 ~~~l~~li~~~--------~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 44 LSRLSELIKDY--------TIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT 102 (150)
T ss_dssp HHHHHHHHTTS--------EEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCH
T ss_pred HHHHHHHHHHc--------CCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCH
Confidence 35677777764 77777776 6544432211111112222344455677 4567997664
No 265
>2cks_A Endoglucanase E-5; carbohydrate metabolism, polysaccharide degradation, glycoside hydrolase family 5, hydrolase, glycosidase; HET: BEN; 1.6A {Thermobifida fusca} PDB: 2ckr_A*
Probab=28.70 E-value=39 Score=25.01 Aligned_cols=23 Identities=13% Similarity=0.122 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHhCCeEEEcccc
Q psy1628 62 NYLREVYKHVRAAGGVCVADEVQ 84 (114)
Q Consensus 62 ~fl~~lr~lc~~~gillI~DEV~ 84 (114)
+.++++.+.|+++|+.+|+|=-.
T Consensus 80 ~~ld~~v~~a~~~Gl~vild~h~ 102 (306)
T 2cks_A 80 DRMHQLIDMATARGLYVIVDWHI 102 (306)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEecC
Confidence 45566778999999999999543
No 266
>1uf5_A N-carbamyl-D-amino acid amidohydrolase; HET: CDT; 1.60A {Agrobacterium SP} SCOP: d.160.1.2 PDB: 1uf4_A* 1uf7_A* 1uf8_A* 1erz_A 1fo6_A 2ggl_A 2ggk_A
Probab=28.44 E-value=63 Score=23.62 Aligned_cols=37 Identities=11% Similarity=0.055 Sum_probs=26.9
Q ss_pred EEEEcccCCCCCcccC-----------------CHHHHHHHHHHHHHhCCeEEE
Q psy1628 44 AFFAESLQSCGGQIIP-----------------PANYLREVYKHVRAAGGVCVA 80 (114)
Q Consensus 44 AviiEPv~g~gG~~~~-----------------~~~fl~~lr~lc~~~gillI~ 80 (114)
-+|+=|.....|..+. +..+++.++++++++++.+++
T Consensus 40 dlvv~PE~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~ 93 (303)
T 1uf5_A 40 NFIVFPELALTTFFPRWHFTDEAELDSFYETEMPGPVVRPLFEKAAELGIGFNL 93 (303)
T ss_dssp SEEECCTTTTSCCGGGSCCCCHHHHHTTSBSSSSCTTTHHHHHHHHHHTCEEEE
T ss_pred CEEEeccccccCCCccccccchhhhHHHHhhcCCCHHHHHHHHHHHHhCeEEEE
Confidence 4778887665554321 346789999999999998875
No 267
>2vhj_A Ntpase P4, P4; non- hydrolysable ATP analogue, hydrolase, virus dsRNA, molecular motor, packaging ATPase, hexameric helicase; HET: ADP; 1.80A {Pseudomonas phage PHI12} PDB: 2vhq_A* 1w44_A* 1w46_A* 1w47_A* 1w48_A* 1w49_A* 1w4a_A* 1w4b_A* 1w4c_A 2vht_A* 2vhu_A* 2vhc_A*
Probab=28.24 E-value=43 Score=26.40 Aligned_cols=24 Identities=13% Similarity=0.250 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
...++.+++..++++ ++|+||+++
T Consensus 170 e~~l~~i~~~l~~~~-LLVIDsI~a 193 (331)
T 2vhj_A 170 NVFVDDIARAMLQHR-VIVIDSLKN 193 (331)
T ss_dssp HHHHHHHHHHHHHCS-EEEEECCTT
T ss_pred HHHHHHHHHHHhhCC-EEEEecccc
Confidence 566777888888888 999999997
No 268
>1o51_A Hypothetical protein TM0021; ferredoxin-like fold, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.50A {Thermotoga maritima} SCOP: d.58.5.4
Probab=28.08 E-value=58 Score=21.60 Aligned_cols=45 Identities=16% Similarity=0.154 Sum_probs=23.0
Q ss_pred CHHHHHHHHHHHHHhCCe-EEEccccccccccCccchhhhhcCCCCCcC
Q psy1628 60 PANYLREVYKHVRAAGGV-CVADEVQVGFGRVGTHWWAFQLQGDDIIPD 107 (114)
Q Consensus 60 ~~~fl~~lr~lc~~~gil-lI~DEV~tGfgRtG~~~~~~~~~g~~v~PD 107 (114)
.....+.+.+.+++.|+. .-+=--..|||+.|. +.....+. ..+|
T Consensus 28 g~pL~~~Iv~~~~~~GiaGaTV~rgi~GfG~~g~-ih~~~~l~--ls~d 73 (114)
T 1o51_A 28 GKPLFEYLVKRAYELGMKGVTVYRGIMGFGHKRH-MHRSDFFS--LSPD 73 (114)
T ss_dssp TEEHHHHHHHHHHHTTCSCCEEEECSCCCCC----------------CC
T ss_pred CeEHHHHHHHHHHHCCCCeEEEEcCcEEECCCCC-EEccceee--cCCC
Confidence 345778888999999884 333356789999997 55555444 5555
No 269
>1h1n_A Endo type cellulase ENGI; hydrolase, glycosyl hydrolase, family 5, subtype, thermophilic, thermophIle, endoglucanase; 1.12A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1gzj_A
Probab=27.94 E-value=46 Score=24.61 Aligned_cols=22 Identities=18% Similarity=0.182 Sum_probs=18.3
Q ss_pred HHHHHHHHHHHHhCCeEEEccc
Q psy1628 62 NYLREVYKHVRAAGGVCVADEV 83 (114)
Q Consensus 62 ~fl~~lr~lc~~~gillI~DEV 83 (114)
++++++.+.|+++|+.+|+|=-
T Consensus 72 ~~~~~~v~~~~~~gi~vild~h 93 (305)
T 1h1n_A 72 ADLIATVNAITQKGAYAVVDPH 93 (305)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEecc
Confidence 4577788899999999999943
No 270
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=27.82 E-value=1.4e+02 Score=20.20 Aligned_cols=19 Identities=11% Similarity=0.137 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHHhCCeEE
Q psy1628 61 ANYLREVYKHVRAAGGVCV 79 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI 79 (114)
..|-+.++++|+++|+.+|
T Consensus 160 ~~~~~~i~~~a~~~~v~~i 178 (232)
T 3dc7_A 160 SDYEAAIAQMTADYGVPHL 178 (232)
T ss_dssp HHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHcCCcEE
Confidence 7799999999999998875
No 271
>1ece_A Endocellulase E1; glycosyl hydrolase; HET: BGC; 2.40A {Acidothermus cellulolyticus} SCOP: c.1.8.3 PDB: 1vrx_A
Probab=27.63 E-value=47 Score=24.81 Aligned_cols=25 Identities=8% Similarity=0.077 Sum_probs=20.6
Q ss_pred CHHHHHHHHHHHHHhCCeEEEcccc
Q psy1628 60 PANYLREVYKHVRAAGGVCVADEVQ 84 (114)
Q Consensus 60 ~~~fl~~lr~lc~~~gillI~DEV~ 84 (114)
..++++++.+.|+++|+.+|+|=-.
T Consensus 93 ~~~~ld~~v~~a~~~Gi~vild~h~ 117 (358)
T 1ece_A 93 SLQVMDKIVAYAGQIGLRIILDRHR 117 (358)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEecCC
Confidence 3466788889999999999999654
No 272
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=27.58 E-value=41 Score=25.80 Aligned_cols=23 Identities=17% Similarity=0.315 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHhCCeEEEcccc
Q psy1628 62 NYLREVYKHVRAAGGVCVADEVQ 84 (114)
Q Consensus 62 ~fl~~lr~lc~~~gillI~DEV~ 84 (114)
+.++++.+.|+++|+.+++|=.-
T Consensus 142 ~~i~~v~~~~~~~G~p~lv~~~~ 164 (304)
T 1to3_A 142 NMVKEFNELCHSNGLLSIIEPVV 164 (304)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEEE
T ss_pred HHHHHHHHHHHHcCCcEEEEEEC
Confidence 78888999999999999998433
No 273
>3cg6_A Growth arrest and DNA-damage-inducible 45 gamma; alpha/beta, cell cycle; 1.70A {Mus musculus} PDB: 2wal_A
Probab=27.55 E-value=50 Score=23.33 Aligned_cols=38 Identities=11% Similarity=-0.034 Sum_probs=26.4
Q ss_pred eEEEEEcccC--CCCCcccCCHHHHHHHHHHHHHhCCeEE-Eccc
Q psy1628 42 PCAFFAESLQ--SCGGQIIPPANYLREVYKHVRAAGGVCV-ADEV 83 (114)
Q Consensus 42 iAAviiEPv~--g~gG~~~~~~~fl~~lr~lc~~~gillI-~DEV 83 (114)
.-+++.+.-- + -.+.+.|.+-+..+|.+|+|-+| +|+-
T Consensus 45 ~lCvLA~dcd~e~----D~a~~~y~kLveAlC~E~~I~lIkVdd~ 85 (146)
T 3cg6_A 45 TFCVLAADEEDEG----DIALQIHFTLIQAFCCENDIDIVRVGDV 85 (146)
T ss_dssp EEEEEECCTGGGG----CHHHHHHHHHHHHHHHHTTCEEEEECCH
T ss_pred EEEEecCCCcccc----chhHHHHHHHHHHHHhhcCCCeEEeCch
Confidence 4677776532 1 12336899999999999999876 4543
No 274
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=27.54 E-value=42 Score=21.20 Aligned_cols=25 Identities=8% Similarity=-0.104 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
...-.+++++++++|+.++=|.-.+
T Consensus 26 ~~~A~~I~~~A~e~~VPi~e~~~LA 50 (83)
T 3bzy_B 26 DAKALQIIKLAELYDIPVIEDIPLA 50 (83)
T ss_dssp THHHHHHHHHHHHTTCCEEECHHHH
T ss_pred cHHHHHHHHHHHHcCCCEEeCHHHH
Confidence 4567899999999999999987554
No 275
>1g01_A Endoglucanase; alpha/beta barrel, TIM barrel, hydrolase; 1.90A {Bacillus SP} SCOP: c.1.8.3 PDB: 1g0c_A*
Probab=27.21 E-value=47 Score=25.34 Aligned_cols=23 Identities=9% Similarity=-0.101 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHHhCCeEEEcccc
Q psy1628 62 NYLREVYKHVRAAGGVCVADEVQ 84 (114)
Q Consensus 62 ~fl~~lr~lc~~~gillI~DEV~ 84 (114)
+.++++.++|+++|+.+|+|--.
T Consensus 90 ~~ld~~v~~a~~~Gi~VIld~H~ 112 (364)
T 1g01_A 90 DLVYEGIELAFEHDMYVIVDWHV 112 (364)
T ss_dssp HHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEecc
Confidence 45667789999999999999665
No 276
>2i5b_A Phosphomethylpyrimidine kinase; ADP complex, PDXK, THID, ribokinase superfamily, transferase; HET: ADP; 2.80A {Bacillus subtilis}
Probab=27.07 E-value=1.7e+02 Score=20.75 Aligned_cols=26 Identities=19% Similarity=0.226 Sum_probs=21.8
Q ss_pred CCHHHHHHHHHHHHHhCC-eEEEcccc
Q psy1628 59 PPANYLREVYKHVRAAGG-VCVADEVQ 84 (114)
Q Consensus 59 ~~~~fl~~lr~lc~~~gi-llI~DEV~ 84 (114)
.+++..+.+.+++++++. .+++|=+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~vv~Dp~~ 110 (271)
T 2i5b_A 84 PTVDIIELAAKTIKEKQLKNVVIDPVM 110 (271)
T ss_dssp CSHHHHHHHHHHHHHTTCSSEEECCCC
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEcCCc
Confidence 347888999999999999 59999775
No 277
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=26.88 E-value=49 Score=24.57 Aligned_cols=25 Identities=12% Similarity=0.086 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
-++++++.+.|+++|+.+|+|=-..
T Consensus 68 ~~~l~~~v~~a~~~Gi~vildlh~~ 92 (343)
T 1ceo_A 68 LSYIDRCLEWCKKYNLGLVLDMHHA 92 (343)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEecCC
Confidence 4466777799999999999995543
No 278
>2dcl_A Hypothetical UPF0166 protein PH1503; hexamer, structural genomics, NPPSFA, national project on PR structural and functional analyses; HET: AMP; 2.28A {Pyrococcus horikoshii}
Probab=26.86 E-value=59 Score=22.04 Aligned_cols=47 Identities=13% Similarity=0.184 Sum_probs=24.1
Q ss_pred CCHHHHHHHHHHHHHhCCe-EEEccccccccccCccchhhhhcCCCCCcCE
Q psy1628 59 PPANYLREVYKHVRAAGGV-CVADEVQVGFGRVGTHWWAFQLQGDDIIPDI 108 (114)
Q Consensus 59 ~~~~fl~~lr~lc~~~gil-lI~DEV~tGfgRtG~~~~~~~~~g~~v~PDi 108 (114)
......+.+.+.+++.|+. .-+=--..|||+.|. +.....+. ..+|+
T Consensus 23 ~g~pL~~~Iv~~a~~~GiaGaTV~rgi~GfG~~g~-ih~~~~l~--ls~dl 70 (127)
T 2dcl_A 23 EGRPLYKVIVEKLREMGIAGATVYRGIYGFGKKSR-VHSSDVIR--LSTDL 70 (127)
T ss_dssp TTEEHHHHHHHHHHHTTCSCEEEEECSEEEC-----------------CCC
T ss_pred CCcCHHHHHHHHHHHCCCCeEEEEcCcEEECCCCC-Eecceeee--cCCCC
Confidence 3445788899999999984 444467889999997 55555554 55563
No 279
>2prs_A High-affinity zinc uptake system protein ZNUA; protein consists of two (beta/ALFA)4 domains, metal transport; 1.70A {Escherichia coli} PDB: 2osv_A 2ps0_A 2ps3_A 2ps9_A 2ogw_A 2xy4_A* 2xqv_A* 2xh8_A
Probab=26.84 E-value=1.9e+02 Score=21.29 Aligned_cols=29 Identities=31% Similarity=0.416 Sum_probs=26.5
Q ss_pred ccCCHHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 57 IIPPANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 57 ~~~~~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
..|++.-++++.+.++++++-.||-|-+.
T Consensus 205 ~eps~~~l~~l~~~ik~~~v~~if~e~~~ 233 (284)
T 2prs_A 205 IQPGAQRLHEIRTQLVEQKATCVFAEPQF 233 (284)
T ss_dssp SCCCHHHHHHHHHHHHHTTCCEEEECTTS
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 46889999999999999999999999876
No 280
>1h4p_A Glucan 1,3-beta-glucosidase I/II; hydrolase, glucan degradation, hydrolyase, glycosidase; HET: NAG BMA MAN NDG; 1.75A {Saccharomyces cerevisiae} SCOP: c.1.8.3
Probab=26.45 E-value=48 Score=26.09 Aligned_cols=24 Identities=17% Similarity=0.104 Sum_probs=20.7
Q ss_pred CHHHHHHHHHHHHHhCCeEEEccc
Q psy1628 60 PANYLREVYKHVRAAGGVCVADEV 83 (114)
Q Consensus 60 ~~~fl~~lr~lc~~~gillI~DEV 83 (114)
.-++++++.+.|+++|+-+|+|=-
T Consensus 112 ~l~~ld~vv~~a~~~Gi~VilDlH 135 (408)
T 1h4p_A 112 QESYLDQAIGWARNNSLKVWVDLH 135 (408)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEECC
Confidence 457888889999999999999954
No 281
>1rh9_A Endo-beta-mannanase; endo-beta-mannase, retaining, glycoside hydrolase family 5; 1.50A {Solanum lycopersicum} SCOP: c.1.8.3
Probab=26.37 E-value=50 Score=24.84 Aligned_cols=21 Identities=14% Similarity=-0.012 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHhCCeEEEc
Q psy1628 61 ANYLREVYKHVRAAGGVCVAD 81 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~D 81 (114)
-+.+..+.++|+++|+.+|+|
T Consensus 84 ~~~ld~~i~~a~~~Gi~vil~ 104 (373)
T 1rh9_A 84 FQGLDFVISEAKKYGIHLIMS 104 (373)
T ss_dssp HHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEEE
Confidence 345566778999999999997
No 282
>3dgp_A RNA polymerase II transcription factor B subunit; protein-protein complex, beta-alpha-beta spilt, heterodimer, damage, DNA excision; 1.80A {Saccharomyces cerevisiae}
Probab=26.13 E-value=86 Score=19.77 Aligned_cols=35 Identities=9% Similarity=0.002 Sum_probs=28.5
Q ss_pred EEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 43 CAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 43 AAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
-+++++- .++.+-++.+++.|++.|+|+--|+..-
T Consensus 22 ~g~Ly~~--------F~s~~efe~~~~yA~e~gvLlW~~~~kr 56 (80)
T 3dgp_A 22 EGSLYSD--------FETSQEYNLLSKYAQDIGVLLWKDDKKK 56 (80)
T ss_dssp EEEEEEC--------CSCHHHHHHHHHHHHHTTCEEEEETTTT
T ss_pred ceEEEec--------CCCHHHHHHHHHHHHHcCeEEEecCCcc
Confidence 4666663 5667889999999999999999998754
No 283
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=25.58 E-value=51 Score=26.16 Aligned_cols=23 Identities=17% Similarity=0.128 Sum_probs=20.9
Q ss_pred CHHHHHHHHHHHHHhCCeEEEcc
Q psy1628 60 PANYLREVYKHVRAAGGVCVADE 82 (114)
Q Consensus 60 ~~~fl~~lr~lc~~~gillI~DE 82 (114)
..++++++.+.|+++|+-+|+|=
T Consensus 111 ~~~~ld~vV~~a~~~Gl~VILDl 133 (399)
T 3n9k_A 111 QVQYLEKALGWARKNNIRVWIDL 133 (399)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHCCCEEEEEe
Confidence 46899999999999999999993
No 284
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=25.36 E-value=32 Score=25.28 Aligned_cols=37 Identities=8% Similarity=0.002 Sum_probs=23.1
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
.++.++++-......|....+ +++ + +|+++|+||++.
T Consensus 141 ~~t~~v~~~~~~n~tG~~~~~---l~~---i---~~~~vivD~a~~ 177 (362)
T 2c0r_A 141 DNAAYLHLTSNETIEGAQFKA---FPD---T---GSVPLIGDMSSD 177 (362)
T ss_dssp TTEEEEEEESEETTTTEECSS---CCC---C---TTSCEEEECTTT
T ss_pred CCcCEEEEeCCcCccceeccc---ccc---c---CCCEEEEEChhh
Confidence 456666665444555664222 222 2 899999999986
No 285
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=25.16 E-value=55 Score=24.18 Aligned_cols=22 Identities=9% Similarity=0.043 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHhCCeEEEcc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADE 82 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DE 82 (114)
-++++++.+.|+++|+.+|+|=
T Consensus 81 ~~~~d~~v~~a~~~Gi~vildl 102 (320)
T 3nco_A 81 LDRVKHVVDVALKNDLVVIINC 102 (320)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEc
Confidence 4667777889999999999984
No 286
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=25.07 E-value=1.3e+02 Score=22.80 Aligned_cols=30 Identities=13% Similarity=0.001 Sum_probs=27.1
Q ss_pred ccCCHHHHHHHHHHHHHhCCeEEEcccccc
Q psy1628 57 IIPPANYLREVYKHVRAAGGVCVADEVQVG 86 (114)
Q Consensus 57 ~~~~~~fl~~lr~lc~~~gillI~DEV~tG 86 (114)
..|++.-++++.+.++++++-.||-|-+..
T Consensus 221 ~eps~~~l~~l~~~ik~~~v~~If~e~~~~ 250 (312)
T 2o1e_A 221 QEPSAASLAKLKTYAKEHNVKVIYFEEIAS 250 (312)
T ss_dssp SCCCHHHHHHHHHHTTSSCCCEEECSSCCC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCC
Confidence 578999999999999999999999998764
No 287
>1uuq_A Mannosyl-oligosaccharide glucosidase; hydrolase, mannosidase, mannan, glycoside hydrolase, family 5; 1.5A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uz4_A*
Probab=25.03 E-value=53 Score=25.75 Aligned_cols=21 Identities=10% Similarity=-0.148 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHhCCeEEEcc
Q psy1628 62 NYLREVYKHVRAAGGVCVADE 82 (114)
Q Consensus 62 ~fl~~lr~lc~~~gillI~DE 82 (114)
+.+..+.++|+++|+.+|+|=
T Consensus 111 ~~lD~~l~~a~~~Gi~vil~l 131 (440)
T 1uuq_A 111 QGLDYLLVELAKRDMTVVLYF 131 (440)
T ss_dssp HHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHCCCEEEEEc
Confidence 445578899999999999873
No 288
>2e11_A Hydrolase; dimethylarsenic inhibi complex, cacodylate; 1.73A {Xanthomonas campestris PV}
Probab=25.01 E-value=1.2e+02 Score=21.70 Aligned_cols=37 Identities=5% Similarity=-0.090 Sum_probs=27.3
Q ss_pred EEEEcccCCCCCcc--------cCCHHHHHHHHHHHHHhCCeEEE
Q psy1628 44 AFFAESLQSCGGQI--------IPPANYLREVYKHVRAAGGVCVA 80 (114)
Q Consensus 44 AviiEPv~g~gG~~--------~~~~~fl~~lr~lc~~~gillI~ 80 (114)
-+|+=|.....|.. ..+..+++.++++++++++.+|+
T Consensus 37 dlvv~PE~~~~gy~~~~~~~a~~~~~~~~~~l~~~a~~~~~~iv~ 81 (266)
T 2e11_A 37 DLVILPETFTSGFSNEAIDKAEDMDGPTVAWIRTQAARLGAAITG 81 (266)
T ss_dssp SEEECCTTTTTCSCSGGGGGCEETTSHHHHHHHHHHHHHTSEEEE
T ss_pred CEEECCCCccccCChhHHHhhccCCCHHHHHHHHHHHHhCCEEEE
Confidence 37888876655542 12357899999999999998875
No 289
>1w41_A 50S ribosomal protein L30E; electrostatic interactions, thermostability, protein engineering; 1.7A {Thermococcus celer} SCOP: d.79.3.1 PDB: 3n4y_A 3lfo_A 1w40_A 1go0_A 1go1_A 1h7m_A 1w42_A 1w3e_X 3ra6_A 3ra5_A 3n4z_A 2bo1_A
Probab=24.89 E-value=72 Score=20.11 Aligned_cols=22 Identities=9% Similarity=0.036 Sum_probs=18.9
Q ss_pred CCHHHHHHHHHHHHHhCCeEEE
Q psy1628 59 PPANYLREVYKHVRAAGGVCVA 80 (114)
Q Consensus 59 ~~~~fl~~lr~lc~~~gillI~ 80 (114)
.|++..+.+..+|+++++.++.
T Consensus 42 ~~~~~~~~l~~~c~~~~vp~~~ 63 (101)
T 1w41_A 42 ARPDIKEDIEYYARLSGIPVYE 63 (101)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEE
T ss_pred CCHHHHHHHHHHHHhcCCCEEE
Confidence 4679999999999999998653
No 290
>2lbw_A H/ACA ribonucleoprotein complex subunit 2; L7AE, snoRNP, scaRNP, RNA binding protein; NMR {Saccharomyces cerevisiae} PDB: 2lbx_A
Probab=24.82 E-value=57 Score=21.53 Aligned_cols=27 Identities=7% Similarity=-0.058 Sum_probs=21.0
Q ss_pred CCHHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 59 PPANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 59 ~~~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
.|.++...+..+|+++++.++.-.-..
T Consensus 47 ~~~~~~~~l~~lc~~~~VP~~~v~sk~ 73 (121)
T 2lbw_A 47 WPADVISHIPVLCEDHSVPYIFIPSKQ 73 (121)
T ss_dssp SCTTHHHHHHHHHHHTCCCEEECCCHH
T ss_pred CHHHHHHHHHHHHHhcCCcEEEECCHH
Confidence 445688999999999999987654433
No 291
>2w1v_A Nitrilase-2, nitrilase homolog 2; hydrolase; 1.49A {Mus musculus}
Probab=24.77 E-value=1.2e+02 Score=21.95 Aligned_cols=37 Identities=3% Similarity=-0.110 Sum_probs=26.7
Q ss_pred EEEEcccCCCCCccc---------CCHHHHHHHHHHHHHhCCeEEE
Q psy1628 44 AFFAESLQSCGGQII---------PPANYLREVYKHVRAAGGVCVA 80 (114)
Q Consensus 44 AviiEPv~g~gG~~~---------~~~~fl~~lr~lc~~~gillI~ 80 (114)
-+|+=|.....|... .+..+++.++++++++++.+|+
T Consensus 37 dlvv~PE~~~~gy~~~~~~~~~~~~~~~~~~~l~~~a~~~~~~iv~ 82 (276)
T 2w1v_A 37 NIVSLPECFNSPYGTTYFPDYAEKIPGESTQKLSEVAKESSIYLIG 82 (276)
T ss_dssp SEEECCTTTTSCCSTTTHHHHCBCSSSHHHHHHHHHHHHHTSEEEC
T ss_pred CEEEcCCCcccCCCHHHHHHHhccCCCHHHHHHHHHHHHcCeEEEe
Confidence 377888766545321 1356899999999999998874
No 292
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=24.68 E-value=57 Score=23.17 Aligned_cols=24 Identities=25% Similarity=0.390 Sum_probs=21.8
Q ss_pred ccCCHHHHHHHHHHHHHhCCeEEE
Q psy1628 57 IIPPANYLREVYKHVRAAGGVCVA 80 (114)
Q Consensus 57 ~~~~~~fl~~lr~lc~~~gillI~ 80 (114)
+-||++.+..+.+++++.|+-+|+
T Consensus 96 irPP~El~~~i~~lA~~v~adliI 119 (153)
T 2k4m_A 96 IRPPAEIHSSLMRVADAVGARLII 119 (153)
T ss_dssp ESCCTTTHHHHHHHHHHHTCEEEE
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEE
Confidence 468899999999999999998886
No 293
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=24.20 E-value=61 Score=24.11 Aligned_cols=25 Identities=8% Similarity=-0.209 Sum_probs=20.1
Q ss_pred CHHHHHHHHHHHHHhCCeEEEcccc
Q psy1628 60 PANYLREVYKHVRAAGGVCVADEVQ 84 (114)
Q Consensus 60 ~~~fl~~lr~lc~~~gillI~DEV~ 84 (114)
.-++++++.+.|+++|+-+|+|=-.
T Consensus 75 ~~~~ld~~v~~a~~~Gi~vildlh~ 99 (341)
T 1vjz_A 75 FFEKIDRVIFWGEKYGIHICISLHR 99 (341)
T ss_dssp GHHHHHHHHHHHHHHTCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEEEecC
Confidence 4556778889999999999998543
No 294
>1bm4_A Protein (moloney murine leukemia virus capsid); moloney murine leukemia virus capsid protein, momlv, MU-MLV, MHR, major homology region; NMR {Synthetic} SCOP: j.47.1.1
Probab=24.04 E-value=38 Score=18.10 Aligned_cols=18 Identities=17% Similarity=0.263 Sum_probs=14.8
Q ss_pred ccCCHHHHHHHHHHHHHh
Q psy1628 57 IIPPANYLREVYKHVRAA 74 (114)
Q Consensus 57 ~~~~~~fl~~lr~lc~~~ 74 (114)
.-.|..|+++|.+..|.+
T Consensus 12 ~EsPs~FlerL~eayR~y 29 (32)
T 1bm4_A 12 NESPSAFLERLKEAYRRY 29 (32)
T ss_dssp GGHHHHHHHHHHHHHHHT
T ss_pred CCChHHHHHHHHHHHHhc
Confidence 567889999999988865
No 295
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=24.03 E-value=51 Score=26.08 Aligned_cols=24 Identities=8% Similarity=0.074 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHhCCeEEEcccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQ 84 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~ 84 (114)
.+|++.++++++..++.+|+.+|.
T Consensus 192 ~~~~~~I~~l~~~~~~PVivK~vg 215 (365)
T 3sr7_A 192 RSWKKHLSDYAKKLQLPFILKEVG 215 (365)
T ss_dssp HHHHHHHHHHHHHCCSCEEEEECS
T ss_pred HHHHHHHHHHHHhhCCCEEEEECC
Confidence 367899999999999999999973
No 296
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=23.74 E-value=87 Score=24.64 Aligned_cols=28 Identities=21% Similarity=0.267 Sum_probs=23.3
Q ss_pred HHHHHHHHHHHHHhCCeEEEcccccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQVGFG 88 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~tGfg 88 (114)
.+=++++.+.|+++|+-+|+|=|..=.+
T Consensus 97 ~~df~~lv~~~H~~Gi~VilD~V~NH~~ 124 (478)
T 2guy_A 97 ADDLKALSSALHERGMYLMVDVVANHMG 124 (478)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcccCC
Confidence 5568888899999999999999886443
No 297
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=23.70 E-value=62 Score=23.64 Aligned_cols=22 Identities=18% Similarity=0.081 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHhCCeEEEcc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADE 82 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DE 82 (114)
-++++++.+.|+++|+.+|+|=
T Consensus 73 ~~~~d~~v~~a~~~Gi~vild~ 94 (317)
T 3aof_A 73 FKRVDEVINGALKRGLAVVINI 94 (317)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEEe
Confidence 3456777789999999999984
No 298
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=23.65 E-value=65 Score=25.49 Aligned_cols=25 Identities=16% Similarity=0.134 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
.+=++++.+.|+++|+-+|+|=|..
T Consensus 82 ~~df~~Lv~~aH~~Gi~VilD~V~N 106 (485)
T 1wpc_A 82 RSQLQAAVTSLKNNGIQVYGDVVMN 106 (485)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecc
Confidence 5668888899999999999998864
No 299
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=23.61 E-value=56 Score=21.28 Aligned_cols=25 Identities=4% Similarity=-0.057 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
...-.+++++++++|+.++=|.-.+
T Consensus 41 ~~~A~~I~~~A~e~gVPi~e~~~LA 65 (97)
T 3t7y_A 41 NLRAKRIIAEAEKYGVPIMRNVPLA 65 (97)
T ss_dssp HHHHHHHHHHHHHHTCCEEECHHHH
T ss_pred cHHHHHHHHHHHHcCCeEEECHHHH
Confidence 5667889999999999999997654
No 300
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=23.51 E-value=53 Score=27.45 Aligned_cols=22 Identities=9% Similarity=0.090 Sum_probs=19.1
Q ss_pred HHHHHHHHHHhCCeEEEccccc
Q psy1628 64 LREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 64 l~~lr~lc~~~gillI~DEV~t 85 (114)
++++|++|++.|+.|++|=-..
T Consensus 220 ~~~~reIAd~vGA~Lm~DmAHi 241 (490)
T 3ou5_A 220 YARMREVCDEVKAHLLADMAHI 241 (490)
T ss_dssp HHHHHHHHHHHTCEEEEECGGG
T ss_pred HHHHHHHHhhcccEEEechhhh
Confidence 6799999999999999995543
No 301
>3qr3_A Endoglucanase EG-II; TIM barrel, hydrolase; 2.05A {Hypocrea jecorina}
Probab=23.26 E-value=61 Score=25.02 Aligned_cols=24 Identities=13% Similarity=0.270 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHhCCeEEEcccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQ 84 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~ 84 (114)
.++++++.+.|+++|+-+|+|==.
T Consensus 83 l~~ld~vV~~a~~~Gi~vIlDlH~ 106 (340)
T 3qr3_A 83 ISKYDQLVQGCLSLGAYCIVDIHN 106 (340)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEEEEecC
Confidence 566777789999999999999543
No 302
>2je8_A Beta-mannosidase; glycoside hydrolase, hydrolase; HET: B3P; 1.7A {Bacteroides thetaiotaomicron} SCOP: b.1.4.1 b.1.4.1 b.1.4.1 b.18.1.5 c.1.8.3 PDB: 2vr4_A* 2vl4_A* 2vmf_A* 2vo5_A* 2vot_A* 2vqt_A* 2vjx_A* 2vqu_A* 2wbk_A*
Probab=23.01 E-value=62 Score=28.16 Aligned_cols=24 Identities=17% Similarity=0.106 Sum_probs=17.1
Q ss_pred CcccCCHHHHHHHHHHHHHhCCeEEEcc
Q psy1628 55 GQIIPPANYLREVYKHVRAAGGVCVADE 82 (114)
Q Consensus 55 G~~~~~~~fl~~lr~lc~~~gillI~DE 82 (114)
|...+++. ..++|+++|++++.|-
T Consensus 374 g~~y~~~~----~~d~cD~~GilV~~e~ 397 (848)
T 2je8_A 374 GGTYENNL----FYDLADENGILVWQDF 397 (848)
T ss_dssp TSCCCCHH----HHHHHHHHTCEEEEEC
T ss_pred CccCCCHH----HHHHHHHcCCEEEECc
Confidence 33445554 5579999999998764
No 303
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=22.91 E-value=57 Score=21.12 Aligned_cols=25 Identities=20% Similarity=0.026 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
...-.+++++++++|+.++=|.-.+
T Consensus 26 ~~~A~~I~e~A~e~gVPi~e~~~LA 50 (93)
T 2vt1_B 26 NQCALAVRKYANEVGIPTVRDVKLA 50 (93)
T ss_dssp HHHHHHHHHHHHHTTCCEEECHHHH
T ss_pred cHHHHHHHHHHHHcCCCEEECHHHH
Confidence 4667899999999999999987554
No 304
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A*
Probab=22.84 E-value=1.9e+02 Score=21.51 Aligned_cols=47 Identities=9% Similarity=-0.005 Sum_probs=29.1
Q ss_pred CceEEEEEcccCCCC-------Cccc----CCHHHHHHHHHHHHHhCCeEEE-cccccc
Q psy1628 40 LYPCAFFAESLQSCG-------GQII----PPANYLREVYKHVRAAGGVCVA-DEVQVG 86 (114)
Q Consensus 40 ~~iAAviiEPv~g~g-------G~~~----~~~~fl~~lr~lc~~~gillI~-DEV~tG 86 (114)
.++..+|+|.++.-. |-.. .-..++..|..+++++|+.+|+ .++...
T Consensus 202 ~~~~lvVIDsl~~l~~~~~~~~g~~~~r~~~~~~~l~~L~~la~~~~~~Vi~~nq~~~~ 260 (324)
T 2z43_A 202 PSIKLIVVDSVTSHFRAEYPGRENLAVRQQKLNKHLHQLTRLAEVYDIAVIITNQVMAR 260 (324)
T ss_dssp TTEEEEEETTTTHHHHHHSCTTTSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEC---
T ss_pred cCCCEEEEeCcHHHhhhhhcCcccHHHHHHHHHHHHHHHHHHHHHhCCEEEEEcceeec
Confidence 478899999986521 1000 1146778889999999986554 444443
No 305
>2dyu_A Formamidase; AMIF, CEK, catalytic triad, helicobacter pylori aliphatic amidase, hydrolase; 1.75A {Helicobacter pylori} PDB: 2dyv_A 2e2l_A 2e2k_A
Probab=22.75 E-value=2.5e+02 Score=21.12 Aligned_cols=38 Identities=16% Similarity=-0.041 Sum_probs=28.2
Q ss_pred EEEEEcccCCCCCccc-----------CCHHHHHHHHHHHHHhCCeEEE
Q psy1628 43 CAFFAESLQSCGGQII-----------PPANYLREVYKHVRAAGGVCVA 80 (114)
Q Consensus 43 AAviiEPv~g~gG~~~-----------~~~~fl~~lr~lc~~~gillI~ 80 (114)
+-+|+=|.....|... .+..+++.++++|+++++.+++
T Consensus 53 adLVVfPE~~l~G~~~~~~~~~~~a~~~~~~~~~~l~~~a~~~~i~iv~ 101 (334)
T 2dyu_A 53 VELIIFPEYSTQGLNTAKWLSEEFLLDVPGKETELYAKACKEAKVYGVF 101 (334)
T ss_dssp EEEEECCTTTTTCCCTTTTTSGGGCBCSSSHHHHHHHHHHHHHTCEEEE
T ss_pred CcEEEcCCCccccCCCChhHHHHhhccCCCHHHHHHHHHHHHhCeEEEE
Confidence 5688888766555321 1357899999999999998775
No 306
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=22.71 E-value=55 Score=25.94 Aligned_cols=47 Identities=9% Similarity=-0.132 Sum_probs=32.9
Q ss_pred CceEEEEEcccCCCC---------Cccc---------CCHHHHHHHHHHHHHhCCeEEEcccccc
Q psy1628 40 LYPCAFFAESLQSCG---------GQII---------PPANYLREVYKHVRAAGGVCVADEVQVG 86 (114)
Q Consensus 40 ~~iAAviiEPv~g~g---------G~~~---------~~~~fl~~lr~lc~~~gillI~DEV~tG 86 (114)
--+.|+-+-|+.-+. |..+ -+.+=++++.+.|+++|+-+|+|=|..=
T Consensus 35 LGv~~I~l~Pi~~~~~~~~~~~~~gYd~~dy~idp~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH 99 (471)
T 1jae_A 35 QGFGGVQISPPNEYLVADGRPWWERYQPVSYIINTRSGDESAFTDMTRRCNDAGVRIYVDAVINH 99 (471)
T ss_dssp TTEEEEECCCCSCBBCCTTCCGGGGGSBCCSCSEETTEEHHHHHHHHHHHHHTTCEEEEEECCSB
T ss_pred cCCCEEEeCccccccCCCCCCcccccccccccccCCCCCHHHHHHHHHHHHHCCCEEEEEEeccc
Confidence 358889898874321 2111 1245588888899999999999988753
No 307
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=22.66 E-value=61 Score=25.66 Aligned_cols=29 Identities=17% Similarity=0.093 Sum_probs=23.4
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQVGFGR 89 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~tGfgR 89 (114)
.+=++++.+.|+++|+-+|+|=|..=.+.
T Consensus 102 ~~df~~Lv~~aH~~Gi~VilD~V~NH~s~ 130 (488)
T 2wc7_A 102 NEAFKELLDAAHQRNIKVVLDGVFNHSSR 130 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCcCCC
Confidence 45588888899999999999998764443
No 308
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=22.62 E-value=56 Score=25.79 Aligned_cols=25 Identities=16% Similarity=0.025 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
.+=++++.+.|+++|+-+|+|=|..
T Consensus 79 ~~dfk~Lv~~aH~~Gi~VilD~V~N 103 (549)
T 4aie_A 79 MADMDELISKAKEHHIKIVMDLVVN 103 (549)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEECcc
Confidence 3448888999999999999999874
No 309
>1ub0_A THID, phosphomethylpyrimidine kinase; thiamin biosynthesis, ribokinase family, phosphorylati structural genomics; 2.05A {Thermus thermophilus} SCOP: c.72.1.2
Probab=22.53 E-value=80 Score=22.33 Aligned_cols=26 Identities=31% Similarity=0.264 Sum_probs=22.3
Q ss_pred CCHHHHHHHHHHHHHhC-CeEEEcccc
Q psy1628 59 PPANYLREVYKHVRAAG-GVCVADEVQ 84 (114)
Q Consensus 59 ~~~~fl~~lr~lc~~~g-illI~DEV~ 84 (114)
++++..+.+.+++++++ +.+++|=+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~vv~Dp~~ 106 (258)
T 1ub0_A 80 GDAAIVEAVAEAVRRFGVRPLVVDPVM 106 (258)
T ss_dssp CSHHHHHHHHHHHHHTTCCSEEECCCC
T ss_pred CCHHHHHHHHHHHHhCCCCcEEECCee
Confidence 36788899999999999 899999765
No 310
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=22.45 E-value=70 Score=25.11 Aligned_cols=25 Identities=16% Similarity=0.093 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
.+=++++.+.|+++|+-+|+|=|..
T Consensus 64 ~~dfk~Lv~~aH~~Gi~VilD~V~N 88 (448)
T 1g94_A 64 RAQFIDMVNRCSAAGVDIYVDTLIN 88 (448)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEECS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEeec
Confidence 4558888899999999999998875
No 311
>2ej9_A Putative biotin ligase; biotin biosynthesis, monomer, X-RAY diffraction, structural genomics, NPPSFA; HET: BTN; 2.00A {Methanocaldococcus jannaschii}
Probab=22.20 E-value=27 Score=25.68 Aligned_cols=23 Identities=30% Similarity=0.455 Sum_probs=19.3
Q ss_pred CCeEEEccccccccccCccchhhh
Q psy1628 75 GGVCVADEVQVGFGRVGTHWWAFQ 98 (114)
Q Consensus 75 gillI~DEV~tGfgRtG~~~~~~~ 98 (114)
+.++++|+-..|-||.|+ -|.+.
T Consensus 26 g~vv~A~~QTaGRGR~Gr-~W~Sp 48 (237)
T 2ej9_A 26 NFIVLADKQNNGKGRWGR-VWYSD 48 (237)
T ss_dssp SEEEEESCBSSCBCGGGC-BCCCC
T ss_pred CEEEEECccCCCCCCCCC-eeeCC
Confidence 789999999999999998 55444
No 312
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=22.17 E-value=62 Score=21.09 Aligned_cols=25 Identities=12% Similarity=-0.025 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
...-.+++++++++|+.++=|.-.+
T Consensus 26 ~~~A~~I~e~A~e~gVPi~e~~~LA 50 (98)
T 3c01_E 26 NQRALAVRAYAEKVGVPVIVDIKLA 50 (98)
T ss_dssp HHHHHHHHHHHHHHTCCEEECHHHH
T ss_pred cHHHHHHHHHHHHcCCCeecCHHHH
Confidence 4567899999999999999987544
No 313
>3jug_A Beta-mannanase; TIM-barrel, glycosidase, hydrolase; 1.60A {Bacillus}
Probab=22.10 E-value=84 Score=24.31 Aligned_cols=25 Identities=20% Similarity=0.159 Sum_probs=20.7
Q ss_pred CCHHHHHHHHHHHHHhCCeEEEccc
Q psy1628 59 PPANYLREVYKHVRAAGGVCVADEV 83 (114)
Q Consensus 59 ~~~~fl~~lr~lc~~~gillI~DEV 83 (114)
...+.++++.++|+++|+.+|+|==
T Consensus 84 ~~l~~ld~~v~~a~~~GiyVIlDlH 108 (345)
T 3jug_A 84 DDIDTVREVIELAEQNKMVAVVEVH 108 (345)
T ss_dssp CCHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEec
Confidence 4567788888999999999999844
No 314
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=22.07 E-value=1.2e+02 Score=23.89 Aligned_cols=37 Identities=3% Similarity=-0.069 Sum_probs=26.7
Q ss_pred EEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcccc
Q psy1628 45 FFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADEVQ 84 (114)
Q Consensus 45 viiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~ 84 (114)
+++-|+ |-.+..++..+ ..+++.|+++|+.+++-+..
T Consensus 97 i~iAPm-g~~~l~~~~~e--~~laraA~~~G~~~~~s~~~ 133 (392)
T 2nzl_A 97 ICVGAT-AMQRMAHVDGE--LATVRACQSLGTGMMLSSWA 133 (392)
T ss_dssp EEECCC-SCGGGTSTTHH--HHHHHHHHHHTCEEEECTTC
T ss_pred eEeccc-cccccccchHH--HHHHHHHHHcCCCeeccchH
Confidence 566666 43444445544 78999999999999987755
No 315
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=21.82 E-value=74 Score=25.10 Aligned_cols=26 Identities=12% Similarity=0.024 Sum_probs=22.4
Q ss_pred CHHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 60 PANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 60 ~~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
+.+=++++.+.|+++|+-+|+|=|..
T Consensus 79 t~~df~~lv~~aH~~Gi~VilD~V~N 104 (480)
T 1ud2_A 79 TKAQLERAIGSLKSNDINVYGDVVMN 104 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccC
Confidence 35668888899999999999998875
No 316
>3ayr_A Endoglucanase; TIM barrel, hydrolase, carbohydrate/sugar binding; 2.00A {Piromyces rhizinflatus} PDB: 3ays_A*
Probab=21.72 E-value=61 Score=24.82 Aligned_cols=24 Identities=13% Similarity=0.110 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHhCCeEEEcccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQ 84 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~ 84 (114)
-++++++.+.|+++|+-+|+|=-.
T Consensus 102 l~~~~~vv~~a~~~Gi~vildlH~ 125 (376)
T 3ayr_A 102 LKRVHEVVDYPYKNGAFVILNLHH 125 (376)
T ss_dssp HHHHHHHHHHHHTTTCEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEECCC
Confidence 456778889999999999999544
No 317
>1d3c_A Cyclodextrin glycosyltransferase; alpha-amylase, product complex, oligosaccharide, family 13 glycosyl hydrolase, transglycosylation; HET: GLC; 1.78A {Bacillus circulans} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 1cxf_A* 1cxk_A* 1cdg_A* 1cxe_A* 1cxh_A* 1cxi_A* 2cxg_A* 1cgv_A* 2dij_A* 1cgy_A* 1kck_A* 1cgx_A* 1cxl_A* 1cgw_A* 1tcm_A 1kcl_A* 1eo5_A* 1eo7_A* 1dtu_A* 1ot1_A* ...
Probab=21.52 E-value=94 Score=26.03 Aligned_cols=25 Identities=8% Similarity=-0.023 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
.+=++++.+.|+++|+-+|+|=|..
T Consensus 115 ~~dfk~Lv~~aH~~GI~VilD~V~N 139 (686)
T 1d3c_A 115 IADFQNLIAAAHAKNIKVIIDFAPN 139 (686)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCcC
Confidence 5568888899999999999998874
No 318
>3hpd_A Hydroxyethylthiazole kinase; alpha-beta, ATP binding, transferase, ATP-binding, M metal-binding, nucleotide-binding, thiamine biosynthesis; 1.85A {Pyrococcus horikoshii}
Probab=21.40 E-value=71 Score=24.16 Aligned_cols=49 Identities=16% Similarity=0.180 Sum_probs=30.9
Q ss_pred CCHHHHHHHH---HHHHHhCCeEEEccccccccccCccchhhhhcCCCCCcCEEE
Q psy1628 59 PPANYLREVY---KHVRAAGGVCVADEVQVGFGRVGTHWWAFQLQGDDIIPDIVT 110 (114)
Q Consensus 59 ~~~~fl~~lr---~lc~~~gillI~DEV~tGfgRtG~~~~~~~~~g~~v~PDivt 110 (114)
+++++.+.+. +.++++|..+|+|=|-.|-...-. -+..+... ..|++++
T Consensus 67 l~~~~~~~m~~A~~~A~~~~~PvVLDPVg~gas~~R~-~~~~~ll~--~~~~vIr 118 (265)
T 3hpd_A 67 LDSGWRRSMVKATEIANELGKPIVLDPVGAGATKFRT-RVSLEILS--RGVDVLK 118 (265)
T ss_dssp CCHHHHHHHHHHHHHHHHHTCCEEEECTTBTTBHHHH-HHHHHHHH--HCCSEEE
T ss_pred CChHHHHHHHHHHHHHHHcCCCEEEcCCCCCCcHHHH-HHHHHHHh--cCCcEEc
Confidence 5666766665 556889999999999877532222 23444444 4566653
No 319
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=21.37 E-value=1.8e+02 Score=18.99 Aligned_cols=57 Identities=7% Similarity=0.009 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCCceEEEEEcccCCCCC----cccCCHHHHHHHHHHHHHhCCeEE
Q psy1628 18 LAVVHLFFERIFLSASLYPFLFLYPCAFFAESLQSCGG----QIIPPANYLREVYKHVRAAGGVCV 79 (114)
Q Consensus 18 ~~~~~~~~e~~~~~~~~~~~~~~~iAAviiEPv~g~gG----~~~~~~~fl~~lr~lc~~~gillI 79 (114)
...+...++++++.-. . ...--+++.|...... ....-..|-+.++++|+++|+.+|
T Consensus 112 ~~~~~~~l~~~i~~~~--~---~~~~vil~~p~~~~~~~~~~~~~~~~~~n~~~~~~a~~~~~~~v 172 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTK--P---RVREMFLLSPFYLEPNRSDPMRKTVDAYIEAMRDVAASEHVPFV 172 (216)
T ss_dssp HHHHHHHHHHHHHHHG--G---GSSEEEEECCCCCCCCTTSHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHHH--h---cCCeEEEECCCcCCCCcchHHHHHHHHHHHHHHHHHHHcCCeEE
Confidence 4455666666666532 1 2344566665432111 112224678888999999998665
No 320
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=21.03 E-value=98 Score=25.91 Aligned_cols=25 Identities=8% Similarity=-0.015 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
.+=+++|.+.|+++|+-+|+|=|..
T Consensus 116 ~~dfk~Lv~~aH~~GikVilD~V~N 140 (683)
T 3bmv_A 116 FTDFQNLINTAHAHNIKVIIDFAPN 140 (683)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccc
Confidence 5568888899999999999998874
No 321
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=20.96 E-value=90 Score=26.24 Aligned_cols=25 Identities=8% Similarity=-0.039 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
.+=+++|.+.|+++|+-+|+|=|..
T Consensus 311 ~~df~~Lv~~aH~~GikVilD~V~N 335 (696)
T 4aee_A 311 MEDFEKLVQVLHSRKIKIVLDITMH 335 (696)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSS
T ss_pred HHHHHHHHHHHHHCCCEEEEecccc
Confidence 5668899999999999999999865
No 322
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=20.90 E-value=81 Score=24.41 Aligned_cols=47 Identities=15% Similarity=0.053 Sum_probs=32.2
Q ss_pred ceEEEEEcccCCC---CCccc-----------CCHHHHHHHHHHHHHhCCeEEEccccccc
Q psy1628 41 YPCAFFAESLQSC---GGQII-----------PPANYLREVYKHVRAAGGVCVADEVQVGF 87 (114)
Q Consensus 41 ~iAAviiEPv~g~---gG~~~-----------~~~~fl~~lr~lc~~~gillI~DEV~tGf 87 (114)
-+.++-+-|+.-+ -|..+ -+.+=++++.+.|+++|+-+|+|=|..=.
T Consensus 34 Gv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~Gi~VilD~V~NH~ 94 (405)
T 1ht6_A 34 GVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGKGVQAIADIVINHR 94 (405)
T ss_dssp TCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CCCEEEeCCCccCCCCCCCCccccccCCCccCCCHHHHHHHHHHHHHCCCEEEEEECcCcc
Confidence 4667777776322 23222 12456888889999999999999887633
No 323
>2xzm_U Ribosomal protein L7AE containing protein; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_U
Probab=20.83 E-value=70 Score=21.46 Aligned_cols=22 Identities=18% Similarity=0.084 Sum_probs=18.7
Q ss_pred CHHHHHHHHHHHHHhCCeEEEc
Q psy1628 60 PANYLREVYKHVRAAGGVCVAD 81 (114)
Q Consensus 60 ~~~fl~~lr~lc~~~gillI~D 81 (114)
|+++...+..+|+++++.++.=
T Consensus 52 p~~~~~~i~~lc~~~~Ip~~~v 73 (126)
T 2xzm_U 52 QGNYVKLVKALCAKNEIKYVSV 73 (126)
T ss_dssp STTHHHHHHHHHHHTTCCEEEE
T ss_pred hHHHHHHHHHHHHHhCCCEEEE
Confidence 4578899999999999998853
No 324
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=20.80 E-value=57 Score=25.40 Aligned_cols=29 Identities=14% Similarity=0.051 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQVGFGR 89 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~tGfgR 89 (114)
.+=++.+.+.|+++|+-+|+|=|..=.+.
T Consensus 74 ~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 102 (422)
T 1ua7_A 74 EQEFKEMCAAAEEYGIKVIVDAVINHTTF 102 (422)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECCSBCCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCcccC
Confidence 56688888999999999999999864443
No 325
>3l55_A B-1,4-endoglucanase/cellulase; putative beta-1,4-endoglucanase, glycosyl hydrolase family 5, mixed alpha-beta, TIM barrel; HET: MSE; 1.60A {Prevotella bryantii} PDB: 3vdh_A*
Probab=20.77 E-value=77 Score=24.50 Aligned_cols=24 Identities=8% Similarity=0.080 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHHhCCeEEEcccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQ 84 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~ 84 (114)
-++++++.+.|+++|+-+|+|==.
T Consensus 90 l~~ld~vVd~a~~~Gi~vIldlH~ 113 (353)
T 3l55_A 90 MMRVKAIVEYAMNAGLYAIVNVHH 113 (353)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECCT
T ss_pred HHHHHHHHHHHHHCCCEEEEECCC
Confidence 455677788999999999999544
No 326
>2r6a_A DNAB helicase, replicative helicase; replication, DNAB; 2.90A {Geobacillus stearothermophilus} PDB: 2r6c_A 2r6d_A 2r6e_A 2vyf_A 2vye_A
Probab=20.67 E-value=2.4e+02 Score=22.04 Aligned_cols=41 Identities=15% Similarity=-0.038 Sum_probs=27.6
Q ss_pred CceEEEEEcccCCCCCcc---cCC----HHHHHHHHHHHHHhCCeEEE
Q psy1628 40 LYPCAFFAESLQSCGGQI---IPP----ANYLREVYKHVRAAGGVCVA 80 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~---~~~----~~fl~~lr~lc~~~gillI~ 80 (114)
.++..+|+|..+.-.... ... ..+++.|+.+++++|+.+|+
T Consensus 312 ~~~~livID~l~~~~~~~~~~~~~~~~i~~i~~~Lk~lAke~~i~vi~ 359 (454)
T 2r6a_A 312 SGLGMIVIDYLQLIQGSGRSKENRQQEVSEISRSLKALARELEVPVIA 359 (454)
T ss_dssp TCCCEEEEECGGGSCCSCC----CHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred cCCCEEEEccHHHhccCCCCCCCHHHHHHHHHHHHHHHHHHhCCeEEE
Confidence 357789999987522111 011 56778899999999986665
No 327
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=20.64 E-value=82 Score=24.74 Aligned_cols=29 Identities=21% Similarity=0.091 Sum_probs=24.0
Q ss_pred CHHHHHHHHHHHHHhCCeEEEcccccccc
Q psy1628 60 PANYLREVYKHVRAAGGVCVADEVQVGFG 88 (114)
Q Consensus 60 ~~~fl~~lr~lc~~~gillI~DEV~tGfg 88 (114)
+.+=++++.+.|+++|+-+|+|=|..=.+
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVVINHRA 113 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 36678899999999999999999876443
No 328
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=20.61 E-value=82 Score=24.55 Aligned_cols=27 Identities=11% Similarity=0.010 Sum_probs=22.5
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQVGF 87 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~tGf 87 (114)
.+=++.+.+.|+++|+-+|+|=|..=.
T Consensus 83 ~~~~~~lv~~~h~~Gi~vi~D~V~NH~ 109 (449)
T 3dhu_A 83 LADFKALTDRAHELGMKVMLDIVYNHT 109 (449)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccCcC
Confidence 456788999999999999999887533
No 329
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=20.60 E-value=22 Score=25.29 Aligned_cols=24 Identities=17% Similarity=-0.038 Sum_probs=19.4
Q ss_pred CCHHHHHHHHHHHHHhCCeEEEcc
Q psy1628 59 PPANYLREVYKHVRAAGGVCVADE 82 (114)
Q Consensus 59 ~~~~fl~~lr~lc~~~gillI~DE 82 (114)
.++++.+.++++|+++++.+|+++
T Consensus 38 ~~~~~~~~i~~l~~~~~~~livnd 61 (210)
T 3ceu_A 38 PAMYSERLLTLIPEKYHRRIVTHE 61 (210)
T ss_dssp CHHHHHHHHHHSCGGGGGGEEESS
T ss_pred CHHHHHHHHHHHHHHhCCeEEEeC
Confidence 456788899999999999887653
No 330
>3j21_Z 50S ribosomal protein L30E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=20.57 E-value=94 Score=19.50 Aligned_cols=22 Identities=9% Similarity=0.107 Sum_probs=19.1
Q ss_pred CCHHHHHHHHHHHHHhCCeE-EE
Q psy1628 59 PPANYLREVYKHVRAAGGVC-VA 80 (114)
Q Consensus 59 ~~~~fl~~lr~lc~~~gill-I~ 80 (114)
.|++..+.+..+|+++++.+ ++
T Consensus 41 ~~~~~~~~i~~~c~~~~ip~~~~ 63 (99)
T 3j21_Z 41 APKEIKDDIYYYAKLSDIPVYEF 63 (99)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEe
Confidence 46899999999999999986 44
No 331
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=20.55 E-value=82 Score=24.88 Aligned_cols=25 Identities=12% Similarity=0.061 Sum_probs=21.9
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQV 85 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~t 85 (114)
.+=++++.+.|+++|+-+|+|=|..
T Consensus 78 ~~df~~lv~~aH~~Gi~VilD~V~N 102 (483)
T 3bh4_A 78 KSELQDAIGSLHSRNVQVYGDVVLN 102 (483)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEEccC
Confidence 5668888899999999999998865
No 332
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=20.53 E-value=1.3e+02 Score=22.63 Aligned_cols=24 Identities=17% Similarity=0.091 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHhCCe---EEEcccc
Q psy1628 61 ANYLREVYKHVRAAGGV---CVADEVQ 84 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gil---lI~DEV~ 84 (114)
.++++++.+.+.++|+- +|+|=..
T Consensus 146 ~~~l~~~~~~a~~~Gi~~~~IilDPg~ 172 (271)
T 2yci_X 146 SQLAMELVANADAHGIPMTELYIDPLI 172 (271)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEECCC
T ss_pred HHHHHHHHHHHHHCCCCcccEEEecCC
Confidence 78999999999999998 9999554
No 333
>3cpq_A 50S ribosomal protein L30E; RNA-protein, elongation factor, ribonucleoprotein, structural genomics, NPPSFA; 1.90A {Methanocaldococcus jannaschii}
Probab=20.30 E-value=83 Score=20.25 Aligned_cols=20 Identities=10% Similarity=0.042 Sum_probs=18.1
Q ss_pred CHHHHHHHHHHHHHhCCeEE
Q psy1628 60 PANYLREVYKHVRAAGGVCV 79 (114)
Q Consensus 60 ~~~fl~~lr~lc~~~gillI 79 (114)
|++....+..+|+++++.++
T Consensus 48 ~~~~~~~l~~~c~~~~Vp~~ 67 (110)
T 3cpq_A 48 PKDLEEDVKYYAKLSNIPVY 67 (110)
T ss_dssp BHHHHHHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHHHHHcCCCEE
Confidence 78999999999999999854
No 334
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=20.15 E-value=83 Score=25.25 Aligned_cols=27 Identities=22% Similarity=0.022 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHhCCeEEEccccccc
Q psy1628 61 ANYLREVYKHVRAAGGVCVADEVQVGF 87 (114)
Q Consensus 61 ~~fl~~lr~lc~~~gillI~DEV~tGf 87 (114)
.+=++++.+.|+++|+-+|+|=|..=.
T Consensus 81 ~~dfk~Lv~~aH~~Gi~VilD~V~NH~ 107 (515)
T 1hvx_A 81 KAQYLQAIQAAHAAGMQVYADVVFDHK 107 (515)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSEE
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecCCc
Confidence 667888899999999999999887533
No 335
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=20.10 E-value=1.4e+02 Score=19.45 Aligned_cols=33 Identities=9% Similarity=0.044 Sum_probs=23.3
Q ss_pred CceEEEEEcccCCCCCcccCCHHHHHHHHHHHHHhCCeEEEcc
Q psy1628 40 LYPCAFFAESLQSCGGQIIPPANYLREVYKHVRAAGGVCVADE 82 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~~~~fl~~lr~lc~~~gillI~DE 82 (114)
.+++|+|+-- | ..|+++.+ ++++++|+.++.=+
T Consensus 73 ~~~~~iIlt~-----g-~~~~~~i~----~~A~~~~ipvl~t~ 105 (139)
T 2ioj_A 73 PNVRCLILTG-----N-LEPVQLVL----TKAEERGVPVILTG 105 (139)
T ss_dssp TTEEEEEEET-----T-CCCCHHHH----HHHHHHTCCEEECS
T ss_pred CCCcEEEEcC-----C-CCCCHHHH----HHHHHCCCeEEEEC
Confidence 3789998862 2 45666555 67889999887644
No 336
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=20.09 E-value=3.2e+02 Score=21.44 Aligned_cols=46 Identities=15% Similarity=0.137 Sum_probs=29.1
Q ss_pred CceEEEEEcccCCCCCcccC-----------CHHHHHHHHHHHHHhCC-eEEEccccc
Q psy1628 40 LYPCAFFAESLQSCGGQIIP-----------PANYLREVYKHVRAAGG-VCVADEVQV 85 (114)
Q Consensus 40 ~~iAAviiEPv~g~gG~~~~-----------~~~fl~~lr~lc~~~gi-llI~DEV~t 85 (114)
.++.-+++|..+..--.... -..+++.|+++++++|+ +++...+.+
T Consensus 272 ~~~~llVIDs~t~~~~~~~sg~g~l~~Rq~~l~~il~~L~~lake~gitVIlv~Hv~~ 329 (400)
T 3lda_A 272 SRFSLIVVDSVMALYRTDFSGRGELSARQMHLAKFMRALQRLADQFGVAVVVTNQVVA 329 (400)
T ss_dssp SCEEEEEEETGGGGCC------CCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEC--
T ss_pred cCCceEEecchhhhCchhhcCccchHHHHHHHHHHHHHHHHHHHHcCCEEEEEEeecc
Confidence 46888999987653111000 05678889999999998 455566643
Done!