BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16292
(245 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 218 bits (556), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 135/178 (75%), Gaps = 20/178 (11%)
Query: 2 KNVEAFMHRYR---------RYRQKYSEVPRLFE-------YLLKYRYT--LYA--LYSR 41
KN++ F+ RY+ R + + EV ++ L++++ T +YA L S+
Sbjct: 50 KNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSK 109
Query: 42 YFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD 101
+ IKRSDSAFFWEERDIMA ANS W+VQL +AFQD + LYMVM+YMPGGDLVNLMSNYD
Sbjct: 110 FEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD 169
Query: 102 VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTG 159
VPEKWA+FY AEVVLALDAIH +GF+HRDVKPDNMLLDK GHLKLADFGTCM+MNK G
Sbjct: 170 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 227
Score = 121 bits (304), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 62/77 (80%)
Query: 164 RLGRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEENFP 223
RLGRNG+EEIK H FF NDQW + LR+ V PVVP+LS D DTSNFDD+E+D+ EE FP
Sbjct: 323 RLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGEEETFP 382
Query: 224 VPKAFAGNHLPFVGFTY 240
+PKAF GN LPFVGFTY
Sbjct: 383 IPKAFVGNQLPFVGFTY 399
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 218 bits (556), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 135/178 (75%), Gaps = 20/178 (11%)
Query: 2 KNVEAFMHRYR---------RYRQKYSEVPRLFE-------YLLKYRYT--LYA--LYSR 41
KN++ F+ RY+ R + + EV ++ L++++ T +YA L S+
Sbjct: 45 KNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSK 104
Query: 42 YFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD 101
+ IKRSDSAFFWEERDIMA ANS W+VQL +AFQD + LYMVM+YMPGGDLVNLMSNYD
Sbjct: 105 FEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD 164
Query: 102 VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTG 159
VPEKWA+FY AEVVLALDAIH +GF+HRDVKPDNMLLDK GHLKLADFGTCM+MNK G
Sbjct: 165 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 222
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 62/77 (80%)
Query: 164 RLGRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEENFP 223
RLGRNG+EEIK H FF NDQW + LR+ V PVVP+LS D DTSNFDD+E+D+ EE FP
Sbjct: 318 RLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGEEETFP 377
Query: 224 VPKAFAGNHLPFVGFTY 240
+PKAF GN LPFVGFTY
Sbjct: 378 IPKAFVGNQLPFVGFTY 394
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 218 bits (556), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/178 (62%), Positives = 135/178 (75%), Gaps = 20/178 (11%)
Query: 2 KNVEAFMHRYR---------RYRQKYSEVPRLFE-------YLLKYRYT--LYA--LYSR 41
KN++ F+ RY+ R + + EV ++ L++++ T +YA L S+
Sbjct: 50 KNIDNFLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSK 109
Query: 42 YFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD 101
+ IKRSDSAFFWEERDIMA ANS W+VQL +AFQD + LYMVM+YMPGGDLVNLMSNYD
Sbjct: 110 FEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYD 169
Query: 102 VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTG 159
VPEKWA+FY AEVVLALDAIH +GF+HRDVKPDNMLLDK GHLKLADFGTCM+MNK G
Sbjct: 170 VPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEG 227
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 62/77 (80%)
Query: 164 RLGRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEENFP 223
RLGRNG+EEIK H FF NDQW + LR+ V PVVP+LS D DTSNFDD+E+D+ EE FP
Sbjct: 323 RLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDKGEEETFP 382
Query: 224 VPKAFAGNHLPFVGFTY 240
+PKAF GN LPFVGFTY
Sbjct: 383 IPKAFVGNQLPFVGFTY 399
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 218 bits (555), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 128/179 (71%), Gaps = 22/179 (12%)
Query: 2 KNVEAFMHRYRRY---------------------RQKYSEVPRLFEYLLKYRYTLYALYS 40
KN++ F++RY + R + EV +L + + L S
Sbjct: 51 KNIDNFLNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEV-QLVRHKASQKVYAMKLLS 109
Query: 41 RYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY 100
++ IKRSDSAFFWEERDIMA ANS W+VQL AFQD K LYMVM+YMPGGDLVNLMSNY
Sbjct: 110 KFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLVNLMSNY 169
Query: 101 DVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTG 159
DVPEKWAKFY AEVVLALDAIH +G +HRDVKPDNMLLDKHGHLKLADFGTCM+M++TG
Sbjct: 170 DVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETG 228
Score = 123 bits (308), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 54/77 (70%), Positives = 61/77 (79%)
Query: 164 RLGRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEENFP 223
RLGRNG+EEIK HPFF NDQW + N+RE PVVPELS D D+SNFDDIE D+ E FP
Sbjct: 324 RLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDDIEDDKGDVETFP 383
Query: 224 VPKAFAGNHLPFVGFTY 240
+PKAF GN LPF+GFTY
Sbjct: 384 IPKAFVGNQLPFIGFTY 400
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 147 bits (372), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 102/136 (75%), Gaps = 4/136 (2%)
Query: 29 LKYRYTLYAL--YSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMD 86
+K +YA+ +++ +KR+++A F EERD++ + + +WI LH+AFQD LY+VMD
Sbjct: 111 MKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMD 170
Query: 87 YMPGGDLVNLMSNYD--VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHL 144
Y GGDL+ L+S ++ +PE A+FY E+VLA+D+IH L +VHRD+KPDN+LLD +GH+
Sbjct: 171 YYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHI 230
Query: 145 KLADFGTCMRMNKTGT 160
+LADFG+C++MN GT
Sbjct: 231 RLADFGSCLKMNDDGT 246
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 160 TETKRLGRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPE 219
+ +RLG+NGIE+ K H FF W N+R P +P++S DTSNFD +
Sbjct: 339 SRERRLGQNGIEDFKKHAFFEGLNW--ENIRNLEAPYIPDVSSPSDTSNFDVDDDVLRNT 396
Query: 220 ENFPVPK--AFAGNHLPFVGFTYS 241
E P F+G HLPF+GFT++
Sbjct: 397 EILPPGSHTGFSGLHLPFIGFTFT 420
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 147 bits (372), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 67/136 (49%), Positives = 102/136 (75%), Gaps = 4/136 (2%)
Query: 29 LKYRYTLYA--LYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMD 86
+K +YA + +++ +KR+++A F EERD++ + + +WI LH+AFQD LY+VMD
Sbjct: 95 MKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLVMD 154
Query: 87 YMPGGDLVNLMSNYD--VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHL 144
Y GGDL+ L+S ++ +PE A+FY E+VLA+D+IH L +VHRD+KPDN+LLD +GH+
Sbjct: 155 YYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDVNGHI 214
Query: 145 KLADFGTCMRMNKTGT 160
+LADFG+C++MN GT
Sbjct: 215 RLADFGSCLKMNDDGT 230
Score = 63.9 bits (154), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 47/84 (55%), Gaps = 4/84 (4%)
Query: 160 TETKRLGRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPE 219
+ +RLG+NGIE+ K H FF W N+R P +P++S DTSNFD +
Sbjct: 323 SRERRLGQNGIEDFKKHAFFEGLNW--ENIRNLEAPYIPDVSSPSDTSNFDVDDDVLRNT 380
Query: 220 ENFPVPK--AFAGNHLPFVGFTYS 241
E P F+G HLPF+GFT++
Sbjct: 381 EILPPGSHTGFSGLHLPFIGFTFT 404
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 145 bits (367), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 101/125 (80%), Gaps = 2/125 (1%)
Query: 38 LYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM 97
+ +++ +KR+++A F EERD++ + +S+WI LH+AFQD +LY+VMDY GGDL+ L+
Sbjct: 106 ILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYVGGDLLTLL 165
Query: 98 SNYD--VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
S ++ +PE+ A+FY AE+V+A+D++H L +VHRD+KPDN+L+D +GH++LADFG+C+++
Sbjct: 166 SKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKL 225
Query: 156 NKTGT 160
+ GT
Sbjct: 226 MEDGT 230
Score = 80.9 bits (198), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 164 RLGRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEENFP 223
RLG+NGIE+ K HPFF W N+R C P +PE+S DTSNFD + E P
Sbjct: 327 RLGQNGIEDFKKHPFFSGIDW--DNIRNCEAPYIPEVSSPTDTSNFDVDDDCLKNSETMP 384
Query: 224 VP--KAFAGNHLPFVGFTYS 241
P AF+G+HLPFVGFTY+
Sbjct: 385 PPTHTAFSGHHLPFVGFTYT 404
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 145 bits (365), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 106/150 (70%), Gaps = 7/150 (4%)
Query: 15 RQKYSEVPRLFEYLLKYRYTLYA--LYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLH 72
R +SEV + +K +YA + +++ +KR + + F EERD++ + + WI QLH
Sbjct: 71 RGAFSEVAVV---KMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLH 127
Query: 73 FAFQDAKSLYMVMDYMPGGDLVNLMSNYD--VPEKWAKFYCAEVVLALDAIHCLGFVHRD 130
FAFQD LY+VM+Y GGDL+ L+S + +P + A+FY AE+V+A+D++H LG+VHRD
Sbjct: 128 FAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRD 187
Query: 131 VKPDNMLLDKHGHLKLADFGTCMRMNKTGT 160
+KPDN+LLD+ GH++LADFG+C+++ GT
Sbjct: 188 IKPDNILLDRCGHIRLADFGSCLKLRADGT 217
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 43/90 (47%), Gaps = 19/90 (21%)
Query: 164 RLGRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESP----- 218
RLGR G + + HPFF W LR+ VPP P+ G DT NFD +E +
Sbjct: 316 RLGRGGAGDFRTHPFFFGLDW--DGLRDSVPPFTPDFEGATDTCNFDLVEDGLTAMVSGG 373
Query: 219 -------EENFPVPKAFAGNHLPFVGFTYS 241
E P+ G HLPFVG++YS
Sbjct: 374 GETLSDIREGAPL-----GVHLPFVGYSYS 398
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDV-PEKWAKFYCAEV 114
ERDI+ N +IV+LH+AFQ LY+++D++ GGDL +S + E+ KFY AE+
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 135
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
LALD +H LG ++RD+KP+N+LLD+ GH+KL DFG
Sbjct: 136 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG 171
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 28/62 (45%), Gaps = 2/62 (3%)
Query: 151 TCMRMNKTGTETKRLGR--NGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSN 208
+ +RM RLG +G+EEIK H FF W RE PP P +DT
Sbjct: 255 SLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKPATGRPEDTFY 314
Query: 209 FD 210
FD
Sbjct: 315 FD 316
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDV-PEKWAKFYCAEV 114
ERDI+ N +IV+LH+AFQ LY+++D++ GGDL +S + E+ KFY AE+
Sbjct: 77 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 136
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
LALD +H LG ++RD+KP+N+LLD+ GH+KL DFG
Sbjct: 137 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG 172
Score = 32.3 bits (72), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 151 TCMRMNKTGTETKRLGR--NGIEEIKAHPFFINDQWTFSNLRECVPPVVP 198
+ +RM RLG +G+EEIK H FF W RE PP P
Sbjct: 256 SLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 305
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 105 bits (261), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDV-PEKWAKFYCAEV 114
ERDI+ N +IV+LH+AFQ LY+++D++ GGDL +S + E+ KFY AE+
Sbjct: 76 ERDILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 135
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
LALD +H LG ++RD+KP+N+LLD+ GH+KL DFG
Sbjct: 136 ALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG 171
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 151 TCMRMNKTGTETKRLGR--NGIEEIKAHPFFINDQWTFSNLRECVPPVVP 198
+ +RM RLG +G+EEIK H FF W RE PP P
Sbjct: 255 SLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 304
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 103 bits (258), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDV-PEKWAKFYCAEV 114
ERDI+A N ++V+LH+AFQ LY+++D++ GGDL +S + E+ KFY AE+
Sbjct: 80 ERDILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAEL 139
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
L LD +H LG ++RD+KP+N+LLD+ GH+KL DFG
Sbjct: 140 ALGLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFG 175
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 23/45 (51%)
Query: 166 GRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFD 210
G +G EEIK H F+ W RE PP P ++ DDT FD
Sbjct: 276 GPDGAEEIKRHVFYSTIDWNKLYRREIKPPFKPAVAQPDDTFYFD 320
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+YMPGGD+ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++K+ADFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 95.1 bits (235), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+YMPGGD+ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++K+ADFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 69/97 (71%), Gaps = 1/97 (1%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM-SNYDVPEKWAKFYCAE 113
+ER +++ +I+++ FQDA+ ++M+MDY+ GG+L +L+ + P AKFY AE
Sbjct: 55 DERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAE 114
Query: 114 VVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
V LAL+ +H ++RD+KP+N+LLDK+GH+K+ DFG
Sbjct: 115 VCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFG 151
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPEL-SGDDDTSNFDDIEKDESP 218
++RLG +NG E++K HP+F W R P P + G DTS F D+ P
Sbjct: 243 SQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRNIETPYEPPIQQGQGDTSQF-----DKYP 297
Query: 219 EENF 222
EE+
Sbjct: 298 EEDI 301
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 70/101 (69%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+PGG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++K+ADFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 191
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 90.9 bits (224), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 1/121 (0%)
Query: 33 YTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGD 92
Y + L + K+ + E ++ + ++V LHF+FQ A LY V+DY+ GG+
Sbjct: 66 YAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGE 125
Query: 93 LV-NLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGT 151
L +L E A+FY AE+ AL +H L V+RD+KP+N+LLD GH+ L DFG
Sbjct: 126 LFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGL 185
Query: 152 C 152
C
Sbjct: 186 C 186
Score = 37.0 bits (84), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 162 TKRLG-RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEE 220
TKRLG ++ EIK+H FF W ++ PP P +SG +D +FD E EE
Sbjct: 279 TKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNPNVSGPNDLRHFD----PEFTEE 334
Query: 221 NFPVPKAFA 229
PVP A
Sbjct: 335 --PVPNAIG 341
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 10/174 (5%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDV-PEKWA 107
D+A ER+I+ +IV L +AFQ LY++++Y+ GG+L + + E A
Sbjct: 64 DTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTA 123
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR 167
FY AE+ +AL +H G ++RD+KP+N++L+ GH+KL DFG C GT T
Sbjct: 124 CFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTF-- 181
Query: 168 NGIEEIKAHPFFIN-------DQWTFSNLRECVPPVVPELSGDDDTSNFDDIEK 214
G E A + D W+ L + P +G++ D I K
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 172 EIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESP 218
E++AHPFF + W R+ PP P L ++D S FD ++P
Sbjct: 273 EVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTP 319
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 85/174 (48%), Gaps = 10/174 (5%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDV-PEKWA 107
D+A ER+I+ +IV L +AFQ LY++++Y+ GG+L + + E A
Sbjct: 64 DTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTA 123
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR 167
FY AE+ +AL +H G ++RD+KP+N++L+ GH+KL DFG C GT T
Sbjct: 124 CFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXF-- 181
Query: 168 NGIEEIKAHPFFIN-------DQWTFSNLRECVPPVVPELSGDDDTSNFDDIEK 214
G E A + D W+ L + P +G++ D I K
Sbjct: 182 CGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILK 235
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 172 EIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESP 218
E++AHPFF + W R+ PP P L ++D S FD ++P
Sbjct: 273 EVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKFTRQTP 319
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y PGG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+++D+ G++K+ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+PGG++ + + E A+FY A++
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 279 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+PGG++ + + E A+FY A++
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 279 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+PGG++ + + E A+FY A++
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 279 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+PGG++ + + E A+FY A++
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +I H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 279 TKRFGNLKNGVNDIXNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+PGG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+PGG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+PGG++ + + E A+FY A++
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 143
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 271 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 327
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+PGG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G ++G+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+PGG++ + + E A+FY A++
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 299 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 355
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+PGG++ + + E A+FY A++
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 136
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 137 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 177
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G ++G+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 264 TKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 320
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+PGG++ + + E A+FY A++
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 279 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I N ++V+L F+F+D +LYMV++Y PGG++ + + E A+FY A++
Sbjct: 92 EKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++K+ADFG R+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRV 192
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 279 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 29 LKYRYTLYALYSRYFQIKRSDSAFFW--EERDIMAHA-NSEWIVQLHFAFQDAKSLYMVM 85
LK +YA+ ++ D W E+ + A N ++V LH FQ L+ V+
Sbjct: 73 LKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 132
Query: 86 DYMPGGDLV-NLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHL 144
+Y+ GGDL+ ++ +PE+ A+FY AE+ LAL+ +H G ++RD+K DN+LLD GH+
Sbjct: 133 EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHI 192
Query: 145 KLADFGTCMRMNKTGTET 162
KL D+G C + G T
Sbjct: 193 KLTDYGMCKEGLRPGDTT 210
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 163 KRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFD 210
+RLG + G +I+ HPFF N W ++ VPP P +SG+ NFD
Sbjct: 303 ERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 353
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y PGG++ + + E A+FY A++
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+++D+ G++K+ DFG R+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 279 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 29 LKYRYTLYALYSRYFQIKRSDSAFFW--EERDIMAHA-NSEWIVQLHFAFQDAKSLYMVM 85
LK +YA+ ++ D W E+ + A N ++V LH FQ L+ V+
Sbjct: 41 LKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 100
Query: 86 DYMPGGDLV-NLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHL 144
+Y+ GGDL+ ++ +PE+ A+FY AE+ LAL+ +H G ++RD+K DN+LLD GH+
Sbjct: 101 EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHI 160
Query: 145 KLADFGTCMRMNKTGTET 162
KL D+G C + G T
Sbjct: 161 KLTDYGMCKEGLRPGDTT 178
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 163 KRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFD 210
+RLG + G +I+ HPFF N W ++ VPP P +SG+ NFD
Sbjct: 271 ERLGCLPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 321
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+PGG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y PGG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+++D+ G++K+ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+PGG++ + + E A+FY A++
Sbjct: 84 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 143
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 144 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 184
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 271 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 327
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 29 LKYRYTLYALYSRYFQIKRSDSAFFW--EERDIMAHA-NSEWIVQLHFAFQDAKSLYMVM 85
LK +YA+ ++ D W E+ + A N ++V LH FQ L+ V+
Sbjct: 26 LKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 85
Query: 86 DYMPGGDLV-NLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHL 144
+Y+ GGDL+ ++ +PE+ A+FY AE+ LAL+ +H G ++RD+K DN+LLD GH+
Sbjct: 86 EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHI 145
Query: 145 KLADFGTCMRMNKTGTET 162
KL D+G C + G T
Sbjct: 146 KLTDYGMCKEGLRPGDTT 163
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 163 KRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFD 210
+RLG + G +I+ HPFF N W ++ VPP P +SG+ NFD
Sbjct: 256 ERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 306
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+PGG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 29 LKYRYTLYALYSRYFQIKRSDSAFFW--EERDIMAHA-NSEWIVQLHFAFQDAKSLYMVM 85
LK +YA+ ++ D W E+ + A N ++V LH FQ L+ V+
Sbjct: 30 LKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVI 89
Query: 86 DYMPGGDLV-NLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHL 144
+Y+ GGDL+ ++ +PE+ A+FY AE+ LAL+ +H G ++RD+K DN+LLD GH+
Sbjct: 90 EYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHI 149
Query: 145 KLADFGTCMRMNKTGTET 162
KL D+G C + G T
Sbjct: 150 KLTDYGMCKEGLRPGDTT 167
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 163 KRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFD 210
+RLG + G +I+ HPFF N W ++ VPP P +SG+ NFD
Sbjct: 260 ERLGCHPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 310
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+PGG++ + + E A+FY A++
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQI 151
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 279 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 88.6 bits (218), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y PGG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+++D+ G++K+ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y PGG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+++D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L ++F+D +LYMVM+Y+PGG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L ++F+D +LYMVM+Y+PGG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G ++G+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 69/101 (68%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L ++F+D +LYMVM+Y+PGG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G ++G+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 77/140 (55%), Gaps = 6/140 (4%)
Query: 51 AFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWA 107
A E+ I+ NS ++V L +A++ +L +V+ M GGDL + M PE A
Sbjct: 229 AMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARA 288
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR 167
FY AE+ L+ +H V+RD+KP+N+LLD HGH++++D G + + + T R+G
Sbjct: 289 VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGT 348
Query: 168 NGIEEIKAHPFFINDQWTFS 187
G A N+++TFS
Sbjct: 349 VG---YMAPEVVKNERYTFS 365
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 77/140 (55%), Gaps = 6/140 (4%)
Query: 51 AFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWA 107
A E+ I+ NS ++V L +A++ +L +V+ M GGDL + M PE A
Sbjct: 229 AMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARA 288
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR 167
FY AE+ L+ +H V+RD+KP+N+LLD HGH++++D G + + + T R+G
Sbjct: 289 VFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGT 348
Query: 168 NGIEEIKAHPFFINDQWTFS 187
G A N+++TFS
Sbjct: 349 VG---YMAPEVVKNERYTFS 365
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 78/134 (58%), Gaps = 6/134 (4%)
Query: 33 YTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGD 92
Y + L R+ IK + + ERD+M+ + + V+L+F FQD + LY + Y G+
Sbjct: 38 YAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 96
Query: 93 L---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADF 149
L + + ++D E +FY AE+V AL+ +H G +HRD+KP+N+LL++ H+++ DF
Sbjct: 97 LLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 154
Query: 150 GTCMRMNKTGTETK 163
GT ++ + +
Sbjct: 155 GTAKVLSPESKQAR 168
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 252 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 286
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 87.8 bits (216), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 78/134 (58%), Gaps = 6/134 (4%)
Query: 33 YTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGD 92
Y + L R+ IK + + ERD+M+ + + V+L+F FQD + LY + Y G+
Sbjct: 37 YAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 95
Query: 93 L---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADF 149
L + + ++D E +FY AE+V AL+ +H G +HRD+KP+N+LL++ H+++ DF
Sbjct: 96 LLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 153
Query: 150 GTCMRMNKTGTETK 163
GT ++ + +
Sbjct: 154 GTAKVLSPESKQAR 167
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 251 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 285
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 78/134 (58%), Gaps = 6/134 (4%)
Query: 33 YTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGD 92
Y + L R+ IK + + ERD+M+ + + V+L+F FQD + LY + Y G+
Sbjct: 36 YAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 94
Query: 93 L---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADF 149
L + + ++D E +FY AE+V AL+ +H G +HRD+KP+N+LL++ H+++ DF
Sbjct: 95 LLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 152
Query: 150 GTCMRMNKTGTETK 163
GT ++ + +
Sbjct: 153 GTAKVLSPESKQAR 166
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 250 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 284
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 87.4 bits (215), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y PGG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+++D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQD 77
+S V E Y + L R+ IK + + ERD+M+ + + V+L+F FQD
Sbjct: 45 FSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD 103
Query: 78 AKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPD 134
+ LY + Y G+L + + ++D E +FY AE+V AL+ +H G +HRD+KP+
Sbjct: 104 DEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPE 161
Query: 135 NMLLDKHGHLKLADFGTCMRMNKTGTETK 163
N+LL++ H+++ DFGT ++ + +
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQAR 190
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 274 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 308
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 78/134 (58%), Gaps = 6/134 (4%)
Query: 33 YTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGD 92
Y + L R+ IK + + ERD+M+ + + V+L+F FQD + LY + Y G+
Sbjct: 35 YAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 93
Query: 93 L---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADF 149
L + + ++D E +FY AE+V AL+ +H G +HRD+KP+N+LL++ H+++ DF
Sbjct: 94 LLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 151
Query: 150 GTCMRMNKTGTETK 163
GT ++ + +
Sbjct: 152 GTAKVLSPESKQAR 165
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 249 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 283
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQD 77
+S V E Y + L R+ IK + + ERD+M+ + + V+L+F FQD
Sbjct: 46 FSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD 104
Query: 78 AKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPD 134
+ LY + Y G+L + + ++D E +FY AE+V AL+ +H G +HRD+KP+
Sbjct: 105 DEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPE 162
Query: 135 NMLLDKHGHLKLADFGTCMRMNKTGTETK 163
N+LL++ H+++ DFGT ++ + +
Sbjct: 163 NILLNEDMHIQITDFGTAKVLSPESKQAR 191
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 275 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 309
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQD 77
+S V E Y + L R+ IK + + ERD+M+ + + V+L+F FQD
Sbjct: 46 FSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD 104
Query: 78 AKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPD 134
+ LY + Y G+L + + ++D E +FY AE+V AL+ +H G +HRD+KP+
Sbjct: 105 DEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPE 162
Query: 135 NMLLDKHGHLKLADFGTCMRMNKTGTETK 163
N+LL++ H+++ DFGT ++ + +
Sbjct: 163 NILLNEDMHIQITDFGTAKVLSPESKQAR 191
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 275 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 309
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++ +L F+F+D +LYMVM+Y PGG++ + + E A+FY A++
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+++D+ G++K+ DFG R+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 279 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++ +L F+F+D +LYMVM+Y PGG++ + + E A+FY A++
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+++D+ G++K+ DFG R+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 279 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQD 77
+S V E Y + L R+ IK + + ERD+M+ + + V+L+F FQD
Sbjct: 43 FSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD 101
Query: 78 AKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPD 134
+ LY + Y G+L + + ++D E +FY AE+V AL+ +H G +HRD+KP+
Sbjct: 102 DEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPE 159
Query: 135 NMLLDKHGHLKLADFGTCMRMNKTGTETK 163
N+LL++ H+++ DFGT ++ + +
Sbjct: 160 NILLNEDMHIQITDFGTAKVLSPESKQAR 188
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 272 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 306
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 87.0 bits (214), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQD 77
+S V E Y + L R+ IK + + ERD+M+ + + V+L+F FQD
Sbjct: 45 FSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD 103
Query: 78 AKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPD 134
+ LY + Y G+L + + ++D E +FY AE+V AL+ +H G +HRD+KP+
Sbjct: 104 DEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPE 161
Query: 135 NMLLDKHGHLKLADFGTCMRMNKTGTETK 163
N+LL++ H+++ DFGT ++ + +
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQAR 190
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 274 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 308
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQD 77
+S V E Y + L R+ IK + + ERD+M+ + + V+L+F FQD
Sbjct: 45 FSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD 103
Query: 78 AKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPD 134
+ LY + Y G+L + + ++D E +FY AE+V AL+ +H G +HRD+KP+
Sbjct: 104 DEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPE 161
Query: 135 NMLLDKHGHLKLADFGTCMRMNKTGTETK 163
N+LL++ H+++ DFGT ++ + +
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQAR 190
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 274 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 308
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQD 77
+S V E Y + L R+ IK + + ERD+M+ + + V+L+F FQD
Sbjct: 48 FSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD 106
Query: 78 AKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPD 134
+ LY + Y G+L + + ++D E +FY AE+V AL+ +H G +HRD+KP+
Sbjct: 107 DEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPE 164
Query: 135 NMLLDKHGHLKLADFGTCMRMNKTGTETK 163
N+LL++ H+++ DFGT ++ + +
Sbjct: 165 NILLNEDMHIQITDFGTAKVLSPESKQAR 193
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 277 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 311
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQD 77
+S V E Y + L R+ IK + + ERD+M+ + + V+L+F FQD
Sbjct: 45 FSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD 103
Query: 78 AKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPD 134
+ LY + Y G+L + + ++D E +FY AE+V AL+ +H G +HRD+KP+
Sbjct: 104 DEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPE 161
Query: 135 NMLLDKHGHLKLADFGTCMRMNKTGTETK 163
N+LL++ H+++ DFGT ++ + +
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQAR 190
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 274 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 308
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQD 77
+S V E Y + L R+ IK + + ERD+M+ + + V+L+F FQD
Sbjct: 43 FSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD 101
Query: 78 AKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPD 134
+ LY + Y G+L + + ++D E +FY AE+V AL+ +H G +HRD+KP+
Sbjct: 102 DEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPE 159
Query: 135 NMLLDKHGHLKLADFGTCMRMNKTGTETK 163
N+LL++ H+++ DFGT ++ + +
Sbjct: 160 NILLNEDMHIQITDFGTAKVLSPESKQAR 188
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 272 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 306
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQD 77
+S V E Y + L R+ IK + + ERD+M+ + + V+L+F FQD
Sbjct: 45 FSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD 103
Query: 78 AKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPD 134
+ LY + Y G+L + + ++D E +FY AE+V AL+ +H G +HRD+KP+
Sbjct: 104 DEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPE 161
Query: 135 NMLLDKHGHLKLADFGTCMRMNKTGTETK 163
N+LL++ H+++ DFGT ++ + +
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQAR 190
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 274 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 308
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 87.0 bits (214), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQD 77
+S V E Y + L R+ IK + + ERD+M+ + + V+L+F FQD
Sbjct: 43 FSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD 101
Query: 78 AKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPD 134
+ LY + Y G+L + + ++D E +FY AE+V AL+ +H G +HRD+KP+
Sbjct: 102 DEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPE 159
Query: 135 NMLLDKHGHLKLADFGTCMRMNKTGTETK 163
N+LL++ H+++ DFGT ++ + +
Sbjct: 160 NILLNEDMHIQITDFGTAKVLSPESKQAR 188
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 272 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 306
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 78/134 (58%), Gaps = 6/134 (4%)
Query: 33 YTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGD 92
Y + L R+ IK + + ERD+M+ + + V+L+F FQD + LY + Y G+
Sbjct: 42 YAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 100
Query: 93 L---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADF 149
L + + ++D E +FY AE+V AL+ +H G +HRD+KP+N+LL++ H+++ DF
Sbjct: 101 LLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 158
Query: 150 GTCMRMNKTGTETK 163
GT ++ + +
Sbjct: 159 GTAKVLSPESKQAR 172
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 256 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 290
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 78/134 (58%), Gaps = 6/134 (4%)
Query: 33 YTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGD 92
Y + L R+ IK + + ERD+M+ + + V+L+F FQD + LY + Y G+
Sbjct: 58 YAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 116
Query: 93 L---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADF 149
L + + ++D E +FY AE+V AL+ +H G +HRD+KP+N+LL++ H+++ DF
Sbjct: 117 LLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 174
Query: 150 GTCMRMNKTGTETK 163
GT ++ + +
Sbjct: 175 GTAKVLSPESKQAR 188
Score = 29.6 bits (65), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 272 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 306
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 87.0 bits (214), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 67/101 (66%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++ +L F+F+D +LYMVM+Y PGG++ + + E A+FY A++
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQI 151
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+++D+ G++K+ DFG R+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV 192
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 279 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 6/149 (4%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQD 77
+S V E Y + L R+ IK + + ERD+M+ + + V+L+F FQD
Sbjct: 50 FSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFCFQD 108
Query: 78 AKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPD 134
+ LY + Y G+L + + ++D E +FY AE+V AL+ +H G +HRD+KP+
Sbjct: 109 DEKLYFGLSYAKNGELLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPE 166
Query: 135 NMLLDKHGHLKLADFGTCMRMNKTGTETK 163
N+LL++ H+++ DFGT ++ + +
Sbjct: 167 NILLNEDMHIQITDFGTAKVLSPESKQAR 195
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 279 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 313
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 78/134 (58%), Gaps = 6/134 (4%)
Query: 33 YTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGD 92
Y + L R+ IK + + ERD+M+ + + V+L+F FQD + LY + Y G+
Sbjct: 57 YAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 115
Query: 93 L---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADF 149
L + + ++D E +FY AE+V AL+ +H G +HRD+KP+N+LL++ H+++ DF
Sbjct: 116 LLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 173
Query: 150 GTCMRMNKTGTETK 163
GT ++ + +
Sbjct: 174 GTAKVLSPESKQAR 187
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 271 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 305
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 78/134 (58%), Gaps = 6/134 (4%)
Query: 33 YTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGD 92
Y + L R+ IK + + ERD+M+ + + V+L+F FQD + LY + Y G+
Sbjct: 57 YAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGE 115
Query: 93 L---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADF 149
L + + ++D E +FY AE+V AL+ +H G +HRD+KP+N+LL++ H+++ DF
Sbjct: 116 LLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDF 173
Query: 150 GTCMRMNKTGTETK 163
GT ++ + +
Sbjct: 174 GTAKVLSPESKQAR 187
Score = 29.6 bits (65), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 271 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 305
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 86.3 bits (212), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 162 TKRLGR--NGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G NG+ +IK H +F W R+ P +P+ G DTSN DD E++E
Sbjct: 278 TKRFGNLPNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNADDYEEEE 334
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TK G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKAFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 151
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 152 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 192
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 279 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 335
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 171
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 299 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 355
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G ++G+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 86 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 145
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 146 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 186
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 273 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 329
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 78 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 137
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 138 VLTFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV 178
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 265 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 321
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 85.9 bits (211), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 112 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQI 171
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+L+D+ G++++ DFG R+
Sbjct: 172 VLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV 212
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 299 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 355
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 6/149 (4%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQD 77
+S V E Y + L R+ IK + + ERD+M+ + + V+L+F FQD
Sbjct: 45 FSTVVLARELATSREYAIKILEKRHI-IKENKVPYVTRERDVMSRLDHPFFVKLYFTFQD 103
Query: 78 AKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPD 134
+ LY + Y G L + + ++D E +FY AE+V AL+ +H G +HRD+KP+
Sbjct: 104 DEKLYFGLSYAKNGCLLKYIRKIGSFD--ETCTRFYTAEIVSALEYLHGKGIIHRDLKPE 161
Query: 135 NMLLDKHGHLKLADFGTCMRMNKTGTETK 163
N+LL++ H+++ DFGT ++ + +
Sbjct: 162 NILLNEDMHIQITDFGTAKVLSPESKQAR 190
Score = 29.6 bits (65), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 20/37 (54%), Gaps = 5/37 (13%)
Query: 162 TKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPP 195
TKRLG G +KAHPFF + W NL + PP
Sbjct: 274 TKRLGCEEMEGYGPLKAHPFFESVTW--ENLHQQTPP 308
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 68/101 (67%), Gaps = 1/101 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E+ I+ N ++V+L F+F+D +LYMVM+Y+ GG++ + + E A+FY A++
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQI 150
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
VL + +H L ++RD+KP+N+++D+ G++++ DFG R+
Sbjct: 151 VLTFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV 191
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 162 TKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
TKR G +NG+ +IK H +F W R+ P +P+ G DTSNFDD E++E
Sbjct: 278 TKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEE 334
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 69/120 (57%), Gaps = 2/120 (1%)
Query: 33 YTLYALYSRYFQIKRSDSAFFWEERDIMAHA-NSEWIVQLHFAFQDAKSLYMVMDYMPGG 91
Y + L K + ER ++ H S ++V LH+AFQ L++++DY+ GG
Sbjct: 85 YAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILDYINGG 144
Query: 92 DLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+L +S + E + Y E+VLAL+ +H LG ++RD+K +N+LLD +GH+ L DFG
Sbjct: 145 ELFTHLSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFG 204
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Query: 45 IKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL-VNLMSNYDVP 103
++R++ ++E IM ++V L ++FQD + ++MV+D + GGDL +L N
Sbjct: 54 VERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFK 113
Query: 104 EKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETK 163
E+ K + E+V+ALD + +HRD+KPDN+LLD+HGH+ + DF + + T
Sbjct: 114 EETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT 173
Query: 164 RLG 166
G
Sbjct: 174 MAG 176
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 82.4 bits (202), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 85/181 (46%), Gaps = 11/181 (6%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV-NLMSNYDVPEKWAKFYCAE 113
E+R + ++ QLH FQ LY VM+Y+ GGDL+ ++ E A FY AE
Sbjct: 69 EKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAE 128
Query: 114 VVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGRN----G 169
+ + L +H G ++RD+K DN++LD GH+K+ADFG C G T+
Sbjct: 129 ISIGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIA 188
Query: 170 IEEIKAHPFFIN-DQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEENFPVPKAF 228
E I P+ + D W + L + P G+D+ F I E N PK+
Sbjct: 189 PEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIM-----EHNVSYPKSL 243
Query: 229 A 229
+
Sbjct: 244 S 244
Score = 28.9 bits (63), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 3/55 (5%)
Query: 158 TGTETKRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFD 210
T KRLG G +++ H FF W RE PP P++ G NFD
Sbjct: 256 TKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPFKPKVCG-KGAENFD 309
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV-NLMSNYDVPEKWAKFYCAE 113
E+R + ++ + FQ ++L+ VM+Y+ GGDL+ ++ S + A FY AE
Sbjct: 67 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAE 126
Query: 114 VVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTC 152
++L L +H G V+RD+K DN+LLDK GH+K+ADFG C
Sbjct: 127 IILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMC 165
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 163 KRLGRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEENF 222
KRLG G +I+ HP F W +E PP P++ D SNFD +E P +F
Sbjct: 259 KRLGVRG--DIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLSF 316
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 62/99 (62%), Gaps = 1/99 (1%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV-NLMSNYDVPEKWAKFYCAE 113
E+R + ++ + FQ ++L+ VM+Y+ GGDL+ ++ S + A FY AE
Sbjct: 68 EKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAE 127
Query: 114 VVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTC 152
++L L +H G V+RD+K DN+LLDK GH+K+ADFG C
Sbjct: 128 IILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMC 166
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 163 KRLGRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEENF 222
KRLG G +I+ HP F W +E PP P++ D SNFD +E P F
Sbjct: 260 KRLGVRG--DIRQHPLFREINWEELERKEIDPPFRPKVKSPFDCSNFDKEFLNEKPRLXF 317
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-----VPEKWAKFY 110
E+ I+A +S +IV L +AF+ L +VM M GGD+ + N D E A FY
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGRNGI 170
A++V L+ +H ++RD+KP+N+LLD G+++++D G + + T+TK G G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK--GYAGT 352
Query: 171 EEIKAHPFFINDQWTFS 187
A + +++ FS
Sbjct: 353 PGFMAPELLLGEEYDFS 369
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-----VPEKWAKFY 110
E+ I+A +S +IV L +AF+ L +VM M GGD+ + N D E A FY
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGRNGI 170
A++V L+ +H ++RD+KP+N+LLD G+++++D G + + T+TK G G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK--GYAGT 352
Query: 171 EEIKAHPFFINDQWTFS 187
A + +++ FS
Sbjct: 353 PGFMAPELLLGEEYDFS 369
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-----VPEKWAKFY 110
E+ I+A +S +IV L +AF+ L +VM M GGD+ + N D E A FY
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGRNGI 170
A++V L+ +H ++RD+KP+N+LLD G+++++D G + + T+TK G G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK--GYAGT 352
Query: 171 EEIKAHPFFINDQWTFS 187
A + +++ FS
Sbjct: 353 PGFMAPELLLGEEYDFS 369
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 7/137 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-----VPEKWAKFY 110
E+ I+A +S +IV L +AF+ L +VM M GGD+ + N D E A FY
Sbjct: 235 EKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFY 294
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGRNGI 170
A++V L+ +H ++RD+KP+N+LLD G+++++D G + + T+TK G G
Sbjct: 295 TAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK--GYAGT 352
Query: 171 EEIKAHPFFINDQWTFS 187
A + +++ FS
Sbjct: 353 PGFMAPELLLGEEYDFS 369
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGG 91
RY + + I + + A E ++ + ++ L +AFQ L VM+Y GG
Sbjct: 31 RYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 90
Query: 92 DLVNLMSNYDV-PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+L +S V E+ A+FY AE+V AL+ +H V+RD+K +N++LDK GH+K+ DFG
Sbjct: 91 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG 150
Query: 151 TCMRMNKTGTETK 163
C G K
Sbjct: 151 LCKEGISDGATMK 163
Score = 33.5 bits (75), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 166 GRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDD 211
G + +E+ H FF++ W ++ +PP P+++ + DT FDD
Sbjct: 251 GPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 296
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGG 91
RY + + I + + A E ++ + ++ L +AFQ L VM+Y GG
Sbjct: 34 RYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 93
Query: 92 DLVNLMSNYDV-PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+L +S V E+ A+FY AE+V AL+ +H V+RD+K +N++LDK GH+K+ DFG
Sbjct: 94 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG 153
Query: 151 TCMRMNKTGTETK 163
C G K
Sbjct: 154 LCKEGISDGATMK 166
Score = 33.9 bits (76), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 166 GRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDD 211
G + +E+ H FF++ W ++ +PP P+++ + DT FDD
Sbjct: 254 GPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 299
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGG 91
RY + + I + + A E ++ + ++ L +AFQ L VM+Y GG
Sbjct: 31 RYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 90
Query: 92 DLVNLMSNYDV-PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+L +S V E+ A+FY AE+V AL+ +H V+RD+K +N++LDK GH+K+ DFG
Sbjct: 91 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG 150
Query: 151 TCMRMNKTGTETK 163
C G K
Sbjct: 151 LCKEGISDGATMK 163
Score = 33.9 bits (76), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 166 GRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDD 211
G + +E+ H FF++ W ++ +PP P+++ + DT FDD
Sbjct: 251 GPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 296
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGG 91
RY + + I + + A E ++ + ++ L +AFQ L VM+Y GG
Sbjct: 31 RYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 90
Query: 92 DLVNLMSNYDV-PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+L +S V E+ A+FY AE+V AL+ +H V+RD+K +N++LDK GH+K+ DFG
Sbjct: 91 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG 150
Query: 151 TCMRMNKTGTETK 163
C G K
Sbjct: 151 LCKEGISDGATMK 163
Score = 33.9 bits (76), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 166 GRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDD 211
G + +E+ H FF++ W ++ +PP P+++ + DT FDD
Sbjct: 251 GPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 296
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGG 91
RY + + I + + A E ++ + ++ L +AFQ L VM+Y GG
Sbjct: 31 RYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 90
Query: 92 DLVNLMSNYDV-PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+L +S V E+ A+FY AE+V AL+ +H V+RD+K +N++LDK GH+K+ DFG
Sbjct: 91 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG 150
Query: 151 TCMRMNKTGTETK 163
C G K
Sbjct: 151 LCKEGISDGATMK 163
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 166 GRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDD 211
G + +E+ H FF++ W ++ +PP P+++ + DT FDD
Sbjct: 251 GPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 296
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGG 91
RY + + I + + A E ++ + ++ L +AFQ L VM+Y GG
Sbjct: 31 RYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 90
Query: 92 DLVNLMSNYDV-PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+L +S V E+ A+FY AE+V AL+ +H V+RD+K +N++LDK GH+K+ DFG
Sbjct: 91 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG 150
Query: 151 TCMRMNKTGTETK 163
C G K
Sbjct: 151 LCKEGISDGATMK 163
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 166 GRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDD 211
G + +E+ H FF++ W ++ +PP P+++ + DT FDD
Sbjct: 251 GPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 296
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 79.7 bits (195), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 70/133 (52%), Gaps = 1/133 (0%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGG 91
RY + + I + + A E ++ + ++ L +AFQ L VM+Y GG
Sbjct: 36 RYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 95
Query: 92 DLVNLMSNYDV-PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+L +S V E+ A+FY AE+V AL+ +H V+RD+K +N++LDK GH+K+ DFG
Sbjct: 96 ELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFG 155
Query: 151 TCMRMNKTGTETK 163
C G K
Sbjct: 156 LCKEGISDGATMK 168
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 26/46 (56%)
Query: 166 GRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDD 211
G + +E+ H FF++ W ++ +PP P+++ + DT FDD
Sbjct: 256 GPSDAKEVMEHRFFLSINWQDVVQKKLLPPFKPQVTSEVDTRYFDD 301
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/181 (31%), Positives = 83/181 (45%), Gaps = 11/181 (6%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV-NLMSNYDVPEKWAKFYCAE 113
E+R + ++ QLH FQ LY VM+Y+ GGDL+ ++ E A FY AE
Sbjct: 70 EKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAE 129
Query: 114 VVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGRN----G 169
+ + L + G ++RD+K DN++LD GH+K+ADFG C G TK
Sbjct: 130 IAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPDYIA 189
Query: 170 IEEIKAHPFFIN-DQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEENFPVPKAF 228
E I P+ + D W F L + G+D+ F I E N PK+
Sbjct: 190 PEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIM-----EHNVAYPKSM 244
Query: 229 A 229
+
Sbjct: 245 S 245
Score = 27.7 bits (60), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 23/50 (46%), Gaps = 3/50 (6%)
Query: 163 KRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFD 210
KRLG G +IK H FF W +E PP P+ G + NFD
Sbjct: 262 KRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKACG-RNAENFD 310
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV-NLMSNYDVPEKWAKFYCAE 113
E+R + N ++ QL FQ L+ VM+++ GGDL+ ++ + E A+FY AE
Sbjct: 73 EKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAE 132
Query: 114 VVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTET 162
++ AL +H G ++RD+K DN+LLD GH KLADFG C G T
Sbjct: 133 IISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTT 181
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 36/83 (43%), Gaps = 10/83 (12%)
Query: 158 TGTETKRLG---RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFD-DIE 213
T T RLG + G I HPFF W N R+ PP P + +D SNFD D
Sbjct: 260 TKNPTMRLGSLTQGGEHAILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFDPDFI 319
Query: 214 KDESPEENFPVPKAFAGNHLPFV 236
K+E PV HLP +
Sbjct: 320 KEE------PVLXPIDEGHLPMI 336
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 61/110 (55%), Gaps = 1/110 (0%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV-NLMSNYDVPEKWAKFYCAE 113
E+R + ++ QLH FQ LY VM+Y+ GGDL+ ++ E A FY AE
Sbjct: 391 EKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAE 450
Query: 114 VVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETK 163
+ + L + G ++RD+K DN++LD GH+K+ADFG C G TK
Sbjct: 451 IAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTK 500
Score = 29.3 bits (64), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 163 KRLG--RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFD 210
KRLG G +IK H FF W +E PP P+ SG + NFD
Sbjct: 583 KRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPKASG-RNAENFD 631
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGG 91
RY + + + + + A E ++ ++ ++ L ++FQ L VM+Y GG
Sbjct: 36 RYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 95
Query: 92 DLVNLMSNYDV-PEKWAKFYCAEVVLALDAIHC-LGFVHRDVKPDNMLLDKHGHLKLADF 149
+L +S V E A+FY AE+V ALD +H V+RD+K +N++LDK GH+K+ DF
Sbjct: 96 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDF 155
Query: 150 GTCMRMNKTGTETK 163
G C K G K
Sbjct: 156 GLCKEGIKDGATMK 169
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 166 GRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDD 211
G +EI H FF W ++ PP P+++ + DT FD+
Sbjct: 257 GSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 302
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 77.0 bits (188), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGG 91
RY + + + + + A E ++ ++ ++ L ++FQ L VM+Y GG
Sbjct: 177 RYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 236
Query: 92 DLVNLMSNYDV-PEKWAKFYCAEVVLALDAIHC-LGFVHRDVKPDNMLLDKHGHLKLADF 149
+L +S V E A+FY AE+V ALD +H V+RD+K +N++LDK GH+K+ DF
Sbjct: 237 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDF 296
Query: 150 GTCMRMNKTGTETK 163
G C K G K
Sbjct: 297 GLCKEGIKDGATMK 310
Score = 30.8 bits (68), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 166 GRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDD 211
G +EI H FF W ++ PP P+++ + DT FD+
Sbjct: 398 GSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 443
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGG 91
RY + + + + + A E ++ ++ ++ L ++FQ L VM+Y GG
Sbjct: 174 RYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 233
Query: 92 DLVNLMSNYDV-PEKWAKFYCAEVVLALDAIHC-LGFVHRDVKPDNMLLDKHGHLKLADF 149
+L +S V E A+FY AE+V ALD +H V+RD+K +N++LDK GH+K+ DF
Sbjct: 234 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDF 293
Query: 150 GTCMRMNKTGTETK 163
G C K G K
Sbjct: 294 GLCKEGIKDGATMK 307
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 166 GRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDD 211
G +EI H FF W ++ PP P+++ + DT FD+
Sbjct: 395 GSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 440
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGG 91
RY + + + + + A E ++ ++ ++ L ++FQ L VM+Y GG
Sbjct: 34 RYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 93
Query: 92 DLVNLMSNYDV-PEKWAKFYCAEVVLALDAIHC-LGFVHRDVKPDNMLLDKHGHLKLADF 149
+L +S V E A+FY AE+V ALD +H V+RD+K +N++LDK GH+K+ DF
Sbjct: 94 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDF 153
Query: 150 GTCMRMNKTGTETK 163
G C K G K
Sbjct: 154 GLCKEGIKDGATMK 167
Score = 31.2 bits (69), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 166 GRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDD 211
G +EI H FF W ++ PP P+++ + DT FD+
Sbjct: 255 GSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 300
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 2/134 (1%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGG 91
RY + + + + + A E ++ ++ ++ L ++FQ L VM+Y GG
Sbjct: 35 RYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 94
Query: 92 DLVNLMSNYDV-PEKWAKFYCAEVVLALDAIHC-LGFVHRDVKPDNMLLDKHGHLKLADF 149
+L +S V E A+FY AE+V ALD +H V+RD+K +N++LDK GH+K+ DF
Sbjct: 95 ELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDF 154
Query: 150 GTCMRMNKTGTETK 163
G C K G K
Sbjct: 155 GLCKEGIKDGATMK 168
Score = 31.2 bits (69), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/46 (30%), Positives = 22/46 (47%)
Query: 166 GRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDD 211
G +EI H FF W ++ PP P+++ + DT FD+
Sbjct: 256 GSEDAKEIMQHRFFAGIVWQHVYEKKLSPPFKPQVTSETDTRYFDE 301
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 74.3 bits (181), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 33 YTLYALYSRYFQIKRSDSAFFWEE--RDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPG 90
Y + L + ++K+ ++ E +++ + +IV + +AF L ++D M G
Sbjct: 216 YAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 275
Query: 91 GDLVNLMSNYDV-PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADF 149
GDL +S + V E +FY AE++L L+ +H V+RD+KP N+LLD+HGH++++D
Sbjct: 276 GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDL 335
Query: 150 GTCMRMNK 157
G +K
Sbjct: 336 GLACDFSK 343
Score = 33.9 bits (76), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 14/73 (19%)
Query: 165 LGRNGIEEIKAHPFFINDQWTFSNLRECVPPVVP---ELSGDD--DTSNFDD-------- 211
LGR G +E+K PFF + W L++ PP++P E++ D D +FD+
Sbjct: 439 LGR-GAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKL 497
Query: 212 IEKDESPEENFPV 224
++ D+ NFP+
Sbjct: 498 LDSDQELYRNFPL 510
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 33 YTLYALYSRYFQIKRSDSAFFWEE--RDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPG 90
Y + L + ++K+ ++ E +++ + +IV + +AF L ++D M G
Sbjct: 217 YAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 276
Query: 91 GDLVNLMSNYDV-PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADF 149
GDL +S + V E +FY AE++L L+ +H V+RD+KP N+LLD+HGH++++D
Sbjct: 277 GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDL 336
Query: 150 GTCMRMNK 157
G +K
Sbjct: 337 GLACDFSK 344
Score = 33.9 bits (76), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 14/73 (19%)
Query: 165 LGRNGIEEIKAHPFFINDQWTFSNLRECVPPVVP---ELSGDD--DTSNFDD-------- 211
LGR G +E+K PFF + W L++ PP++P E++ D D +FD+
Sbjct: 440 LGR-GAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKL 498
Query: 212 IEKDESPEENFPV 224
++ D+ NFP+
Sbjct: 499 LDSDQELYRNFPL 511
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 33 YTLYALYSRYFQIKRSDSAFFWEE--RDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPG 90
Y + L + ++K+ ++ E +++ + +IV + +AF L ++D M G
Sbjct: 217 YAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 276
Query: 91 GDLVNLMSNYDV-PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADF 149
GDL +S + V E +FY AE++L L+ +H V+RD+KP N+LLD+HGH++++D
Sbjct: 277 GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDL 336
Query: 150 GTCMRMNK 157
G +K
Sbjct: 337 GLACDFSK 344
Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 14/73 (19%)
Query: 165 LGRNGIEEIKAHPFFINDQWTFSNLRECVPPVVP---ELSGDD--DTSNFDD-------- 211
LGR G +E+K PFF + W L++ PP++P E++ D D +FD+
Sbjct: 440 LGR-GAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKL 498
Query: 212 IEKDESPEENFPV 224
++ D+ NFP+
Sbjct: 499 LDSDQELYRNFPL 511
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 33 YTLYALYSRYFQIKRSDSAFFWEE--RDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPG 90
Y + L + ++K+ ++ E +++ + +IV + +AF L ++D M G
Sbjct: 217 YAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNG 276
Query: 91 GDLVNLMSNYDV-PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADF 149
GDL +S + V E +FY AE++L L+ +H V+RD+KP N+LLD+HGH++++D
Sbjct: 277 GDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDL 336
Query: 150 GTCMRMNK 157
G +K
Sbjct: 337 GLACDFSK 344
Score = 33.9 bits (76), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 14/73 (19%)
Query: 165 LGRNGIEEIKAHPFFINDQWTFSNLRECVPPVVP---ELSGDD--DTSNFDD-------- 211
LGR G +E+K PFF + W L++ PP++P E++ D D +FD+
Sbjct: 440 LGR-GAQEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKL 498
Query: 212 IEKDESPEENFPV 224
++ D+ NFP+
Sbjct: 499 LDSDQELYRNFPL 511
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 67/120 (55%)
Query: 46 KRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEK 105
K+ + E IM E +V+++ ++ L++VM+++ GG L +++++ + E+
Sbjct: 111 KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE 170
Query: 106 WAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRL 165
C V+ AL +H G +HRD+K D++LL G +KL+DFG C +++K K L
Sbjct: 171 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL 230
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 73.9 bits (180), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 67/120 (55%)
Query: 46 KRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEK 105
K+ + E IM E +V+++ ++ L++VM+++ GG L +++++ + E+
Sbjct: 66 KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE 125
Query: 106 WAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRL 165
C V+ AL +H G +HRD+K D++LL G +KL+DFG C +++K K L
Sbjct: 126 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL 185
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 67/120 (55%)
Query: 46 KRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEK 105
K+ + E IM E +V+++ ++ L++VM+++ GG L +++++ + E+
Sbjct: 68 KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE 127
Query: 106 WAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRL 165
C V+ AL +H G +HRD+K D++LL G +KL+DFG C +++K K L
Sbjct: 128 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL 187
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 73.6 bits (179), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 67/120 (55%)
Query: 46 KRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEK 105
K+ + E IM E +V+++ ++ L++VM+++ GG L +++++ + E+
Sbjct: 188 KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE 247
Query: 106 WAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRL 165
C V+ AL +H G +HRD+K D++LL G +KL+DFG C +++K K L
Sbjct: 248 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL 307
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 67/120 (55%)
Query: 46 KRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEK 105
K+ + E IM E +V+++ ++ L++VM+++ GG L +++++ + E+
Sbjct: 61 KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE 120
Query: 106 WAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRL 165
C V+ AL +H G +HRD+K D++LL G +KL+DFG C +++K K L
Sbjct: 121 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL 180
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 67/120 (55%)
Query: 46 KRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEK 105
K+ + E IM E +V+++ ++ L++VM+++ GG L +++++ + E+
Sbjct: 57 KQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE 116
Query: 106 WAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRL 165
C V+ AL +H G +HRD+K D++LL G +KL+DFG C +++K K L
Sbjct: 117 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXL 176
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 72.4 bits (176), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 28/183 (15%)
Query: 46 KRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEK 105
K+ + E IM + + +V ++ ++ L++VM+++ GG L +++++ + E+
Sbjct: 82 KQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEE 141
Query: 106 WAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKT------- 158
C V+ AL +H G +HRD+K D++LL G +KL+DFG C +++K
Sbjct: 142 QIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXL 201
Query: 159 -----------------GTETK--RLGRNGIEEIKAHPFFINDQ--WTFSNLRECVPPVV 197
GTE LG IE I P + N+ +R+ +PP V
Sbjct: 202 VGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPPRV 261
Query: 198 PEL 200
+L
Sbjct: 262 KDL 264
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 71.2 bits (173), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query: 48 SDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKW 106
SD E + + + + I QL+ + A ++MV++Y PGG+L + + + D + E+
Sbjct: 50 SDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEEE 109
Query: 107 AKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMR 154
+ ++V A+ +H G+ HRD+KP+N+L D++ LKL DFG C +
Sbjct: 110 TRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAK 157
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 67/120 (55%)
Query: 46 KRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEK 105
K+ + E IM +V+++ ++ + L+++M+++ GG L +++S + E+
Sbjct: 82 KQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEE 141
Query: 106 WAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRL 165
C V+ AL +H G +HRD+K D++LL G +KL+DFG C +++K + K L
Sbjct: 142 QIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXL 201
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G++ + +S +D E+ Y
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFD--EQRTATYIT 120
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G++ + +S +D E+ Y
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFD--EQRTATYIT 120
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 68.2 bits (165), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEV 114
+E +++ +S ++ + + ++ L+++M+Y+ GG ++L+ + E E+
Sbjct: 74 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 133
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKR 164
+ LD +H +HRD+K N+LL +HG +KLADFG ++ T T+ KR
Sbjct: 134 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKR 181
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEV 114
+E +++ +S ++ + + ++ L+++M+Y+ GG ++L+ + E E+
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 113
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKR 164
+ LD +H +HRD+K N+LL +HG +KLADFG ++ T T+ KR
Sbjct: 114 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKR 161
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEV 114
+E +++ +S ++ + + ++ L+++M+Y+ GG ++L+ + E E+
Sbjct: 54 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 113
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKR 164
+ LD +H +HRD+K N+LL +HG +KLADFG ++ T T+ KR
Sbjct: 114 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKR 161
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEV 114
+E +++ +S ++ + + ++ L+++M+Y+ GG ++L+ + E E+
Sbjct: 69 QEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREI 128
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKR 164
+ LD +H +HRD+K N+LL +HG +KLADFG ++ T T+ KR
Sbjct: 129 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQL--TDTQIKR 176
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 141
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 142 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 67.4 bits (163), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFD--EQRTATYIT 119
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL +G LK+ADFG
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 75 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 132
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 133 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 170
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 120
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 116
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 117 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFD--EQRTATYIT 119
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL +G LK+ADFG
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG 157
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 67.4 bits (163), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 84 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 141
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 142 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 179
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 118
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 115
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 115
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEV 114
+E +++ +S +I + ++ + L+++M+Y+ GG ++L+ + E + E+
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILREI 125
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKR 164
+ LD +H +HRD+K N+LL + G +KLADFG ++ T T+ KR
Sbjct: 126 LKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKR 173
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 117
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 118 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 155
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 120
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 118
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 116
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 117 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 67.0 bits (162), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 59 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 116
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 117 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 154
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 62 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 119
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 120 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 157
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 57 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 114
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 115 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 152
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 115
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 63 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 120
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 158
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 115
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 55 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 112
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 113 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 150
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 118
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 115
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 115
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 115
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 116 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 118
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 118
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG 156
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 55/106 (51%), Gaps = 3/106 (2%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E ++A+ IVQ +F++ SLY+VMDY GGDL +N E +
Sbjct: 73 EVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFV 132
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKT 158
++ LAL +H +HRD+K N+ L K G ++L DFG +N T
Sbjct: 133 QICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNST 178
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F D+ +Y++++Y P G + + +S +D E+ Y
Sbjct: 58 EVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 115
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 116 ELANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFG 153
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 60 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 117
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+A+FG
Sbjct: 118 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG 155
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCA 112
E +I +H I++L+ F DA +Y++++Y P G + + +S +D E+ Y
Sbjct: 61 EVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFD--EQRTATYIT 118
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
E+ AL H +HRD+KP+N+LL G LK+A+FG
Sbjct: 119 ELANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG 156
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 44 QIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDV 102
Q+ S + E IM N IV+L + K+LY+VM+Y GG++ + L+++ +
Sbjct: 51 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 103 PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
EK A+ ++V A+ H VHRD+K +N+LLD ++K+ADFG
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 158
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 44 QIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDV 102
Q+ S + E IM N IV+L + K+LY+VM+Y GG++ + L+++ +
Sbjct: 51 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 103 PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
EK A+ ++V A+ H VHRD+K +N+LLD ++K+ADFG
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 158
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 44 QIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDV 102
Q+ S + E IM N IV+L + K+LY+VM+Y GG++ + L+++ +
Sbjct: 51 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 103 PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
EK A+ ++V A+ H VHRD+K +N+LLD ++K+ADFG
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 158
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 44 QIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDV 102
Q+ S + E IM N IV+L + K+LY+VM+Y GG++ + L+++ +
Sbjct: 51 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 103 PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
EK A+ ++V A+ H VHRD+K +N+LLD ++K+ADFG
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 158
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 44 QIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDV 102
Q+ S + E IM N IV+L + K+LY+VM+Y GG++ + L+++ +
Sbjct: 51 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRM 110
Query: 103 PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
EK A+ ++V A+ H VHRD+K +N+LLD ++K+ADFG
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 158
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 61/110 (55%), Gaps = 2/110 (1%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEV 114
+E +++ +S ++ + + ++ L+++M+Y+ GG ++L+ E E+
Sbjct: 70 QEITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEI 129
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKR 164
+ LD +H +HRD+K N+LL + G +KLADFG ++ T T+ KR
Sbjct: 130 LKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQL--TDTQIKR 177
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 81 LYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
L++VM+Y+ GG L ++++ + E C E + AL+ +H +HRD+K DN+LL
Sbjct: 93 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 152
Query: 141 HGHLKLADFGTCMRMNKTGTETKR 164
G +KL DFG C ++ T ++KR
Sbjct: 153 DGSVKLTDFGFCAQI--TPEQSKR 174
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 81 LYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
L++VM+Y+ GG L ++++ + E C E + AL+ +H +HRD+K DN+LL
Sbjct: 92 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151
Query: 141 HGHLKLADFGTCMRMNKTGTETKR 164
G +KL DFG C ++ T ++KR
Sbjct: 152 DGSVKLTDFGFCAQI--TPEQSKR 173
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 81 LYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
L++VM+Y+ GG L ++++ + E C E + AL+ +H +HRD+K DN+LL
Sbjct: 92 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151
Query: 141 HGHLKLADFGTCMRMNKTGTETKR 164
G +KL DFG C ++ T ++KR
Sbjct: 152 DGSVKLTDFGFCAQI--TPEQSKR 173
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 64.3 bits (155), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 81 LYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
L++VM+Y+ GG L ++++ + E C E + AL+ +H +HRD+K DN+LL
Sbjct: 92 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM 151
Query: 141 HGHLKLADFGTCMRMNKTGTETKR 164
G +KL DFG C ++ T ++KR
Sbjct: 152 DGSVKLTDFGFCAQI--TPEQSKR 173
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYC 111
+ E IM N IV+L + K+LY++M+Y GG++ + L+++ + EK A+
Sbjct: 58 LFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF 117
Query: 112 AEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++V A+ H VHRD+K +N+LLD ++K+ADFG
Sbjct: 118 RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFG 156
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYC 111
+ E IM N IV+L + K+LY++M+Y GG++ + L+++ + EK A+
Sbjct: 61 LFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKF 120
Query: 112 AEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++V A+ H VHRD+K +N+LLD ++K+ADFG
Sbjct: 121 RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFG 159
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYC 111
+ E IM N IV+L + K+LY+VM+Y GG++ + L+++ + EK A+
Sbjct: 61 LFREVRIMKILNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKF 120
Query: 112 AEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++V A+ H VHRD+K +N+LLD ++K+ADFG
Sbjct: 121 RQIVSAVQYCHQKYIVHRDLKAENLLLDGDMNIKIADFG 159
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 1/108 (0%)
Query: 44 QIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDV 102
Q+ S + E IM N IV+L + K+LY+VM+Y GG++ + L+++ +
Sbjct: 44 QLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWM 103
Query: 103 PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
EK A+ ++V A+ H VHRD+K +N+LLD ++K+ADFG
Sbjct: 104 KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFG 151
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 81 LYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
L++VM+Y+ GG L ++++ + E C E + AL+ +H +HR++K DN+LL
Sbjct: 93 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGM 152
Query: 141 HGHLKLADFGTCMRMNKTGTETKR 164
G +KL DFG C ++ T ++KR
Sbjct: 153 DGSVKLTDFGFCAQI--TPEQSKR 174
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 61.2 bits (147), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 19 SEVPRLFEYLLKYRYTLYALYSRYFQI---KRSDSAFFWE-ERDIMAHANSEWIVQLHFA 74
EV FE + + + R F I + +D A E E +I+ N I+++
Sbjct: 24 GEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF 83
Query: 75 FQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
F DA+ Y+V++ M GG+L + ++ N + E K Y +++LA+ +H G +HRD+KP
Sbjct: 84 F-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 142
Query: 134 DNMLLDKHGH---LKLADFGTCMRMNKTG 159
+N+LL +K+ DFG + +T
Sbjct: 143 ENVLLSSQEEDCLIKITDFGHSKILGETS 171
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 9/148 (6%)
Query: 19 SEVPRLFEYLLKYRYTLYALYSRYFQI---KRSDSAFFWE-ERDIMAHANSEWIVQLHFA 74
EV FE + + + R F I + +D A E E +I+ N I+++
Sbjct: 30 GEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF 89
Query: 75 FQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
F DA+ Y+V++ M GG+L + ++ N + E K Y +++LA+ +H G +HRD+KP
Sbjct: 90 F-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 148
Query: 134 DNMLLDKHGH---LKLADFGTCMRMNKT 158
+N+LL +K+ DFG + +T
Sbjct: 149 ENVLLSSQEEDCLIKITDFGHSKILGET 176
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 19 SEVPRLFEYLLKYRYTLYALYSRYFQI---KRSDSAFFWE-ERDIMAHANSEWIVQLHFA 74
EV FE + + + R F I + +D A E E +I+ N I+++
Sbjct: 23 GEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF 82
Query: 75 FQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
F DA+ Y+V++ M GG+L + ++ N + E K Y +++LA+ +H G +HRD+KP
Sbjct: 83 F-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 141
Query: 134 DNMLLDKHGH---LKLADFGTCMRMNKTG 159
+N+LL +K+ DFG + +T
Sbjct: 142 ENVLLSSQEEDCLIKITDFGHSKILGETS 170
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 19 SEVPRLFEYLLKYRYTLYALYSRYFQI---KRSDSAFFWE-ERDIMAHANSEWIVQLHFA 74
EV FE + + + R F I + +D A E E +I+ N I+++
Sbjct: 24 GEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF 83
Query: 75 FQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
F DA+ Y+V++ M GG+L + ++ N + E K Y +++LA+ +H G +HRD+KP
Sbjct: 84 F-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 142
Query: 134 DNMLLDKHGH---LKLADFGTCMRMNKTG 159
+N+LL +K+ DFG + +T
Sbjct: 143 ENVLLSSQEEDCLIKITDFGHSKILGETS 171
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 19 SEVPRLFEYLLKYRYTLYALYSRYFQI---KRSDSAFFWE-ERDIMAHANSEWIVQLHFA 74
EV FE + + + R F I + +D A E E +I+ N I+++
Sbjct: 24 GEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNF 83
Query: 75 FQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
F DA+ Y+V++ M GG+L + ++ N + E K Y +++LA+ +H G +HRD+KP
Sbjct: 84 F-DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 142
Query: 134 DNMLLDKHGH---LKLADFGTCMRMNKTG 159
+N+LL +K+ DFG + +T
Sbjct: 143 ENVLLSSQEEDCLIKITDFGHSKILGETS 171
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 61.2 bits (147), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 19 SEVPRLFEYLLKYRYTLYALYSRYFQI---KRSDSAFFWE-ERDIMAHANSEWIVQLHFA 74
EV FE + + + R F I + +D A E E +I+ N I+++
Sbjct: 149 GEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIK-N 207
Query: 75 FQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
F DA+ Y+V++ M GG+L + ++ N + E K Y +++LA+ +H G +HRD+KP
Sbjct: 208 FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 267
Query: 134 DNMLLDKHGH---LKLADFGTCMRMNKTG 159
+N+LL +K+ DFG + +T
Sbjct: 268 ENVLLSSQEEDCLIKITDFGHSKILGETS 296
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 60.8 bits (146), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 9/149 (6%)
Query: 19 SEVPRLFEYLLKYRYTLYALYSRYFQI---KRSDSAFFWE-ERDIMAHANSEWIVQLHFA 74
EV FE + + + R F I + +D A E E +I+ N I+++
Sbjct: 163 GEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIK-N 221
Query: 75 FQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
F DA+ Y+V++ M GG+L + ++ N + E K Y +++LA+ +H G +HRD+KP
Sbjct: 222 FFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKP 281
Query: 134 DNMLLDKHGH---LKLADFGTCMRMNKTG 159
+N+LL +K+ DFG + +T
Sbjct: 282 ENVLLSSQEEDCLIKITDFGHSKILGETS 310
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 60.5 bits (145), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGF 126
I++L+ ++MVM+Y+ GG+L + + N + EK ++ +++ +D H
Sbjct: 78 IIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMV 137
Query: 127 VHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
VHRD+KP+N+LLD H + K+ADFG M+
Sbjct: 138 VHRDLKPENVLLDAHMNAKIADFGLSNMMS 167
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD--VPEKWAKFYCAE 113
E +I+A + +IV+L A+ L++++++ PGG + +M D + E + C +
Sbjct: 66 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQ 125
Query: 114 VVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKT 158
++ AL+ +H +HRD+K N+L+ G ++LADFG + KT
Sbjct: 126 MLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 170
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 59/108 (54%), Gaps = 1/108 (0%)
Query: 44 QIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDV 102
Q+ S + E I N IV+L + K+LY+V +Y GG++ + L+++
Sbjct: 51 QLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRX 110
Query: 103 PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
EK A+ ++V A+ H VHRD+K +N+LLD ++K+ADFG
Sbjct: 111 KEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFG 158
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 60/105 (57%), Gaps = 2/105 (1%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD--VPEKWAKFYCAE 113
E +I+A + +IV+L A+ L++++++ PGG + +M D + E + C +
Sbjct: 58 EIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQ 117
Query: 114 VVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKT 158
++ AL+ +H +HRD+K N+L+ G ++LADFG + KT
Sbjct: 118 MLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKT 162
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 59.7 bits (143), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 48/81 (59%), Gaps = 3/81 (3%)
Query: 81 LYMVMDYMPGGDLVNLMSNYD---VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNML 137
L++VM++ G + +L+ N + E+W + C E++ L +H +HRD+K N+L
Sbjct: 102 LWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVL 161
Query: 138 LDKHGHLKLADFGTCMRMNKT 158
L ++ +KL DFG ++++T
Sbjct: 162 LTENAEVKLVDFGVSAQLDRT 182
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 10/168 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS--NYDVPEKWAKFYCAE 113
E IM + ++ LH AF+D + ++++++ GG+L + ++ +Y + E Y +
Sbjct: 98 EISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQ 157
Query: 114 VVLALDAIHCLGFVHRDVKPDNMLLD--KHGHLKLADFGTCMRMN-----KTGTETKRLG 166
L +H VH D+KP+N++ + K +K+ DFG ++N K T T
Sbjct: 158 ACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFA 217
Query: 167 RNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEK 214
I + + F+ D W L + + +G+DD ++++
Sbjct: 218 APEIVDREPVGFY-TDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKR 264
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEV 114
E +I +H I++++ F D K +Y+++++ P G+L L + E+ + + E+
Sbjct: 65 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 124
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
AL H +HRD+KP+N+L+ G LK+ADFG
Sbjct: 125 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 160
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEV 114
E +I +H I++++ F D K +Y+++++ P G+L L + E+ + + E+
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 123
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
AL H +HRD+KP+N+L+ G LK+ADFG
Sbjct: 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEV 114
E +I +H I++++ F D K +Y+++++ P G+L L + E+ + + E+
Sbjct: 64 EIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEEL 123
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
AL H +HRD+KP+N+L+ G LK+ADFG
Sbjct: 124 ADALHYCHERKVIHRDIKPENLLMGYKGELKIADFG 159
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLGF 126
I++L+ +MVM+Y+ GG+L + + + V E A+ +++ A+D H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 127 VHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
VHRD+KP+N+LLD H + K+ADFG M+
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMS 162
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLGF 126
I++L+ +MVM+Y+ GG+L + + + V E A+ +++ A+D H
Sbjct: 73 IIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMV 132
Query: 127 VHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
VHRD+KP+N+LLD H + K+ADFG M+
Sbjct: 133 VHRDLKPENVLLDAHMNAKIADFGLSNMMS 162
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 73/130 (56%), Gaps = 5/130 (3%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHA--NSEWIVQLHFAFQDAKSLYMVMDYMP 89
R T A+ + +KR+ +++I +A N E +V+ + ++ Y+ ++Y
Sbjct: 29 RVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 90 GGDLVNLMS-NYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLAD 148
GG+L + + + +PE A+ + +++ + +H +G HRD+KP+N+LLD+ +LK++D
Sbjct: 89 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISD 148
Query: 149 FG--TCMRMN 156
FG T R N
Sbjct: 149 FGLATVFRYN 158
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKS--LYMVMDYMPGGDLVNLMSNYDVPEKWAKFYC 111
++E I+ + +V+L D LYMV + + G ++ + + + E A+FY
Sbjct: 84 YQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYF 143
Query: 112 AEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGT 151
+++ ++ +H +HRD+KP N+L+ + GH+K+ADFG
Sbjct: 144 QDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGV 183
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 57.8 bits (138), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVP----EKWAKFY 110
EE + H + IVQ +F + + + M+ +PGG L L+ + P E+ FY
Sbjct: 68 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFY 127
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKH-GHLKLADFGTCMRM 155
+++ L +H VHRD+K DN+L++ + G LK++DFGT R+
Sbjct: 128 TKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL 173
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 57.4 bits (137), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVP----EKWAKFY 110
EE + H + IVQ +F + + + M+ +PGG L L+ + P E+ FY
Sbjct: 54 EEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFY 113
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKH-GHLKLADFGTCMRM 155
+++ L +H VHRD+K DN+L++ + G LK++DFGT R+
Sbjct: 114 TKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRL 159
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 32 RYTLYALYSRYFQIKRSDSA--FFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMP 89
R T A+ + +KR+ +E I N E +V+ + ++ Y+ ++Y
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 90 GGDLVNLMS-NYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLAD 148
GG+L + + + +PE A+ + +++ + +H +G HRD+KP+N+LLD+ +LK++D
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISD 147
Query: 149 FG--TCMRMN 156
FG T R N
Sbjct: 148 FGLATVFRYN 157
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 59/110 (53%), Gaps = 2/110 (1%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVP--EKWAKFYCAE 113
E DI+A + IV+L AF +L++++++ GG + +M + P E + C +
Sbjct: 57 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 116
Query: 114 VVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETK 163
+ AL+ +H +HRD+K N+L G +KLADFG + +T + +
Sbjct: 117 TLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRR 166
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 32 RYTLYALYSRYFQIKRSDSA--FFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMP 89
R T A+ + +KR+ +E I N E +V+ + ++ Y+ ++Y
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 90 GGDLVNLMS-NYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLAD 148
GG+L + + + +PE A+ + +++ + +H +G HRD+KP+N+LLD+ +LK++D
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISD 147
Query: 149 FG--TCMRMN 156
FG T R N
Sbjct: 148 FGLATVFRYN 157
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 57.4 bits (137), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + + +
Sbjct: 69 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKSQKLTDDHV 127
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTC 152
+F +++ L IH +HRD+KP N+ +++ LK+ DFG C
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFGLC 172
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 70/130 (53%), Gaps = 5/130 (3%)
Query: 32 RYTLYALYSRYFQIKRSDSA--FFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMP 89
R T A+ + +KR+ +E I N E +V+ + ++ Y+ ++Y
Sbjct: 29 RVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 90 GGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLAD 148
GG+L + + + +PE A+ + +++ + +H +G HRD+KP+N+LLD+ +LK++D
Sbjct: 89 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISD 148
Query: 149 FG--TCMRMN 156
FG T R N
Sbjct: 149 FGLATVFRYN 158
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 57.0 bits (136), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 57/105 (54%), Gaps = 2/105 (1%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVP--EKWAKFYCAE 113
E DI+A + IV+L AF +L++++++ GG + +M + P E + C +
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 114 VVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKT 158
+ AL+ +H +HRD+K N+L G +KLADFG + +T
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRT 188
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 64 NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIH 122
N E +V+ + ++ Y+ ++Y GG+L + + + +PE A+ + +++ + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 123 CLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMN 156
+G HRD+KP+N+LLD+ +LK++DFG T R N
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 57.0 bits (136), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHA--NSEWIVQLHFAFQDAKSLYMVMDYMP 89
R T A+ + +KR+ +++I + N E +V+ + ++ Y+ ++Y
Sbjct: 29 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 90 GGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLAD 148
GG+L + + + +PE A+ + +++ + +H +G HRD+KP+N+LLD+ +LK++D
Sbjct: 89 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISD 148
Query: 149 FG--TCMRMN 156
FG T R N
Sbjct: 149 FGLATVFRYN 158
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 64 NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS-NYDVPEKWAKFYCAEVVLALDAIH 122
N E +V+ + ++ Y+ ++Y GG+L + + + +PE A+ + +++ + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 123 CLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMN 156
+G HRD+KP+N+LLD+ +LK++DFG T R N
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHA--NSEWIVQLHFAFQDAKSLYMVMDYMP 89
R T A+ + +KR+ +++I + N E +V+ + ++ Y+ ++Y
Sbjct: 29 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 90 GGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLAD 148
GG+L + + + +PE A+ + +++ + +H +G HRD+KP+N+LLD+ +LK++D
Sbjct: 89 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISD 148
Query: 149 FG--TCMRMN 156
FG T R N
Sbjct: 149 FGLATVFRYN 158
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHA--NSEWIVQLHFAFQDAKSLYMVMDYMP 89
R T A+ + +KR+ +++I + N E +V+ + ++ Y+ ++Y
Sbjct: 29 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 90 GGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLAD 148
GG+L + + + +PE A+ + +++ + +H +G HRD+KP+N+LLD+ +LK++D
Sbjct: 89 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISD 148
Query: 149 FG--TCMRMN 156
FG T R N
Sbjct: 149 FGLATVFRYN 158
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHA--NSEWIVQLHFAFQDAKSLYMVMDYMP 89
R T A+ + +KR+ +++I + N E +V+ + ++ Y+ ++Y
Sbjct: 29 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 90 GGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLAD 148
GG+L + + + +PE A+ + +++ + +H +G HRD+KP+N+LLD+ +LK++D
Sbjct: 89 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISD 148
Query: 149 FG--TCMRMN 156
FG T R N
Sbjct: 149 FGLATVFRYN 158
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 64 NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS-NYDVPEKWAKFYCAEVVLALDAIH 122
N E +V+ + ++ Y+ ++Y GG+L + + + +PE A+ + +++ + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 123 CLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMN 156
+G HRD+KP+N+LLD+ +LK++DFG T R N
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHA--NSEWIVQLHFAFQDAKSLYMVMDYMP 89
R T A+ + +KR+ +++I + N E +V+ + ++ Y+ ++Y
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 90 GGDLVNLMS-NYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLAD 148
GG+L + + + +PE A+ + +++ + +H +G HRD+KP+N+LLD+ +LK++D
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISD 147
Query: 149 FG--TCMRMN 156
FG T R N
Sbjct: 148 FGLATVFRYN 157
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 57 RDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVV 115
R + H N I+QL ++ ++V D M G+L + L + EK + ++
Sbjct: 65 RKVSGHPN---IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 121
Query: 116 LALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ A+H L VHRD+KP+N+LLD ++KL DFG
Sbjct: 122 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFG 156
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 64 NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS-NYDVPEKWAKFYCAEVVLALDAIH 122
N E +V+ + ++ Y+ ++Y GG+L + + + +PE A+ + +++ + +H
Sbjct: 61 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 120
Query: 123 CLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMN 156
+G HRD+KP+N+LLD+ +LK++DFG T R N
Sbjct: 121 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 156
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHA--NSEWIVQLHFAFQDAKSLYMVMDYMP 89
R T A+ + +KR+ +++I + N E +V+ + ++ Y+ ++Y
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 90 GGDLVNLMS-NYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLAD 148
GG+L + + + +PE A+ + +++ + +H +G HRD+KP+N+LLD+ +LK++D
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISD 147
Query: 149 FG--TCMRMN 156
FG T R N
Sbjct: 148 FGLATVFRYN 157
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 64 NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS-NYDVPEKWAKFYCAEVVLALDAIH 122
N E +V+ + ++ Y+ ++Y GG+L + + + +PE A+ + +++ + +H
Sbjct: 62 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 121
Query: 123 CLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMN 156
+G HRD+KP+N+LLD+ +LK++DFG T R N
Sbjct: 122 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 157
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHA--NSEWIVQLHFAFQDAKSLYMVMDYMP 89
R T A+ + +KR+ +++I + N E +V+ + ++ Y+ ++Y
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 90 GGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLAD 148
GG+L + + + +PE A+ + +++ + +H +G HRD+KP+N+LLD+ +LK++D
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISD 147
Query: 149 FG--TCMRMN 156
FG T R N
Sbjct: 148 FGLATVFRYN 157
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHA--NSEWIVQLHFAFQDAKSLYMVMDYMP 89
R T A+ + +KR+ +++I + N E +V+ + ++ Y+ ++Y
Sbjct: 29 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 90 GGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLAD 148
GG+L + + + +PE A+ + +++ + +H +G HRD+KP+N+LLD+ +LK++D
Sbjct: 89 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISD 148
Query: 149 FG--TCMRMN 156
FG T R N
Sbjct: 149 FGLATVFRYN 158
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 57 RDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVV 115
R + H N I+QL ++ ++V D M G+L + L + EK + ++
Sbjct: 78 RKVSGHPN---IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 116 LALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ A+H L VHRD+KP+N+LLD ++KL DFG
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFG 169
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHA--NSEWIVQLHFAFQDAKSLYMVMDYMP 89
R T A+ + +KR+ +++I + N E +V+ + ++ Y+ ++Y
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 90 GGDLVNLMS-NYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLAD 148
GG+L + + + +PE A+ + +++ + +H +G HRD+KP+N+LLD+ +LK++D
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISD 147
Query: 149 FG--TCMRMN 156
FG T R N
Sbjct: 148 FGLATVFRYN 157
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 57 RDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVV 115
R + H N I+QL ++ ++V D M G+L + L + EK + ++
Sbjct: 78 RKVSGHPN---IIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALL 134
Query: 116 LALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ A+H L VHRD+KP+N+LLD ++KL DFG
Sbjct: 135 EVICALHKLNIVHRDLKPENILLDDDMNIKLTDFG 169
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHA--NSEWIVQLHFAFQDAKSLYMVMDYMP 89
R T A+ + +KR+ +++I + N E +V+ + ++ Y+ ++Y
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 90 GGDLVNLMS-NYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLAD 148
GG+L + + + +PE A+ + +++ + +H +G HRD+KP+N+LLD+ +LK++D
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISD 147
Query: 149 FG--TCMRMN 156
FG T R N
Sbjct: 148 FGLATVFRYN 157
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 82 YMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKH 141
Y+VM+Y+ GG + +P A Y E++ AL +H +G V+ D+KP+N++L +
Sbjct: 160 YIVMEYV-GGQSLKRSKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE 218
Query: 142 GHLKLADFGTCMRMNKTGTETKRLGRNGIEEIKAHPFFINDQWTFS 187
LKL D G R+N G G E ++ P D +T
Sbjct: 219 -QLKLIDLGAVSRINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVG 263
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 72/130 (55%), Gaps = 5/130 (3%)
Query: 32 RYTLYALYSRYFQIKRSDSAFFWEERDIMAHA--NSEWIVQLHFAFQDAKSLYMVMDYMP 89
R T A+ + +KR+ +++I + N E +V+ + ++ Y+ ++Y
Sbjct: 28 RVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 90 GGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLAD 148
GG+L + + + +PE A+ + +++ + +H +G HRD+KP+N+LLD+ +LK++D
Sbjct: 88 GGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISD 147
Query: 149 FG--TCMRMN 156
FG T R N
Sbjct: 148 FGLATVFRYN 157
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 64 NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIH 122
N E +V+ + ++ Y+ ++Y GG+L + + + +PE A+ + +++ + +H
Sbjct: 63 NHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLH 122
Query: 123 CLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMN 156
+G HRD+KP+N+LLD+ +LK++DFG T R N
Sbjct: 123 GIGITHRDIKPENLLLDERDNLKISDFGLATVFRYN 158
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 2/111 (1%)
Query: 48 SDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNL--MSNYDVPEK 105
SD +E IM +S +V+ + ++ L++VM+Y G + ++ + N + E
Sbjct: 66 SDLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTED 125
Query: 106 WAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
+ L+ +H + +HRD+K N+LL+ GH KLADFG ++
Sbjct: 126 EIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLT 176
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 87/170 (51%), Gaps = 27/170 (15%)
Query: 13 RYRQKYSEVPRL----FEYLLKYRYTLYALYSRYFQIKR-----SDSAFFWEERDIMAHA 63
RY + E+ L F ++K R AL SRY+ IK+ + E ++A
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARN---ALDSRYYAIKKIRHTEEKLSTILSEVMLLASL 59
Query: 64 NSEWIVQLHFAFQDAK-------------SLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY 110
N +++V+ + A+ + + +L++ M+Y G L +L+ + ++ ++ +++
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW 119
Query: 111 --CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKT 158
+++ AL IH G +HRD+KP N+ +D+ ++K+ DFG ++++
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVP--EKWAKFYCAE 113
E DI+A + IV+L AF +L++++++ GG + +M + P E + C +
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 114 VVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMR 154
+ AL+ +H +HRD+K N+L G +KLADFG +
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 55.1 bits (131), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 2/101 (1%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVP--EKWAKFYCAE 113
E DI+A + IV+L AF +L++++++ GG + +M + P E + C +
Sbjct: 84 EIDILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQ 143
Query: 114 VVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMR 154
+ AL+ +H +HRD+K N+L G +KLADFG +
Sbjct: 144 TLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAK 184
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 70/155 (45%), Gaps = 13/155 (8%)
Query: 9 HRYRRYRQKYSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWI 68
H+ R R + EV R+ + ++ + + F+ EE A S I
Sbjct: 97 HQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA---------EELMACAGLTSPRI 147
Query: 69 VQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLGFV 127
V L+ A ++ + + M+ + GG L L+ +PE A +Y + + L+ +H +
Sbjct: 148 VPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRIL 207
Query: 128 HRDVKPDNMLLDKHG-HLKLADFG--TCMRMNKTG 159
H DVK DN+LL G H L DFG C++ + G
Sbjct: 208 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLG 242
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A S+ Y+V M G DL N++ + + ++
Sbjct: 75 YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKSQALSDEHV 133
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGT 160
+F +++ L IH G +HRD+KP N+ +++ L++ DFG + ++ T
Sbjct: 134 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT 186
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 9 HRYRRYRQKYSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWI 68
H+ R R + EV R+ + ++ + + F+ EE A S I
Sbjct: 78 HQLRLGRGSFGEVHRMEDKQTGFQCAVKKVRLEVFRA---------EELMACAGLTSPRI 128
Query: 69 VQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLGFV 127
V L+ A ++ + + M+ + GG L L+ +PE A +Y + + L+ +H +
Sbjct: 129 VPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRIL 188
Query: 128 HRDVKPDNMLLDKHG-HLKLADFG--TCMRMNKTGTE 161
H DVK DN+LL G H L DFG C++ + G +
Sbjct: 189 HGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKD 225
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 54.3 bits (129), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F ++L Y+VM +M G DL LM + + E
Sbjct: 72 YRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM-GTDLGKLMKHEKLGEDRI 130
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH G +HRD+KP N+ +++ LK+ DFG
Sbjct: 131 QFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFG 173
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 10/175 (5%)
Query: 48 SDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEK 105
SD +E M+ +V LH AF+D + M+ ++M GG+L +++ + E
Sbjct: 90 SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED 149
Query: 106 WAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLL--DKHGHLKLADFGTCMRMN-----KT 158
A Y +V L +H +VH D+KP+N++ + LKL DFG ++ K
Sbjct: 150 EAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 209
Query: 159 GTETKRLGRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIE 213
T T + E K ++ D W+ L + + G++D +++
Sbjct: 210 TTGTAEFAAPEVAEGKPVGYY-TDMWSVGVLSYILLSGLSPFGGENDDETLRNVK 263
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 48 SDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKW 106
S+S +E ++ + I++L+ F+D ++ Y+VM+ GG+L + ++ E
Sbjct: 63 SNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD 122
Query: 107 AKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGH---LKLADFGTCMRMNKTGTETK 163
A +V+ +H VHRD+KP+N+LL+ +K+ DFG G +
Sbjct: 123 AAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE 182
Query: 164 RLG 166
RLG
Sbjct: 183 RLG 185
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 53.9 bits (128), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 42 YFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD 101
+ +IK + E ++ NS +IV + AF + + M++M GG L ++
Sbjct: 102 HLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG 161
Query: 102 -VPEKWAKFYCAEVVLALDAIHCL-GFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
+PE+ V+ L + +HRDVKP N+L++ G +KL DFG ++
Sbjct: 162 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 217
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.9 bits (128), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 77/175 (44%), Gaps = 10/175 (5%)
Query: 48 SDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEK 105
SD +E M+ +V LH AF+D + M+ ++M GG+L +++ + E
Sbjct: 196 SDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSED 255
Query: 106 WAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLL--DKHGHLKLADFGTCMRMN-----KT 158
A Y +V L +H +VH D+KP+N++ + LKL DFG ++ K
Sbjct: 256 EAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKV 315
Query: 159 GTETKRLGRNGIEEIKAHPFFINDQWTFSNLRECVPPVVPELSGDDDTSNFDDIE 213
T T + E K ++ D W+ L + + G++D +++
Sbjct: 316 TTGTAEFAAPEVAEGKPVGYY-TDMWSVGVLSYILLSGLSPFGGENDDETLRNVK 369
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 42 YFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD 101
+ +IK + E ++ NS +IV + AF + + M++M GG L ++
Sbjct: 67 HLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG 126
Query: 102 -VPEKWAKFYCAEVVLALDAIHCL-GFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
+PE+ V+ L + +HRDVKP N+L++ G +KL DFG ++
Sbjct: 127 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 182
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLGF 126
I++L+ + + MV++Y G +L + + D + E+ A+ + +++ A++ H
Sbjct: 76 IIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 134
Query: 127 VHRDVKPDNMLLDKHGHLKLADFG 150
VHRD+KP+N+LLD+H ++K+ADFG
Sbjct: 135 VHRDLKPENLLLDEHLNVKIADFG 158
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 51 AFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD--- 101
AF E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 58 AFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPA-TVYRVARHYSRAK 116
Query: 102 --VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLGF 126
I++L+ + + MV++Y G +L + + D + E+ A+ + +++ A++ H
Sbjct: 75 IIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 133
Query: 127 VHRDVKPDNMLLDKHGHLKLADFG 150
VHRD+KP+N+LLD+H ++K+ADFG
Sbjct: 134 VHRDLKPENLLLDEHLNVKIADFG 157
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 42 YFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD 101
+ +IK + E ++ NS +IV + AF + + M++M GG L ++
Sbjct: 40 HLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG 99
Query: 102 -VPEKWAKFYCAEVVLALDAIHCL-GFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
+PE+ V+ L + +HRDVKP N+L++ G +KL DFG ++
Sbjct: 100 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 155
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLGF 126
I++L+ + + MV++Y G +L + + D + E+ A+ + +++ A++ H
Sbjct: 66 IIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 124
Query: 127 VHRDVKPDNMLLDKHGHLKLADFG 150
VHRD+KP+N+LLD+H ++K+ADFG
Sbjct: 125 VHRDLKPENLLLDEHLNVKIADFG 148
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 64/131 (48%), Gaps = 6/131 (4%)
Query: 36 YALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGD-LV 94
YA+ Q S S F E + ++ I++L F+D Y+V + + GG L
Sbjct: 41 YAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSILA 100
Query: 95 NLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLL---DKHGHLKLADF-- 149
++ E+ A +V ALD +H G HRD+KP+N+L +K +K+ DF
Sbjct: 101 HIQKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDL 160
Query: 150 GTCMRMNKTGT 160
G+ M++N + T
Sbjct: 161 GSGMKLNNSCT 171
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 42 YFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD 101
+ +IK + E ++ NS +IV + AF + + M++M GG L ++
Sbjct: 43 HLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG 102
Query: 102 -VPEKWAKFYCAEVVLALDAIHCL-GFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
+PE+ V+ L + +HRDVKP N+L++ G +KL DFG ++
Sbjct: 103 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 158
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 27 YLLKYRYT--LYALYSRYFQIKRSDS---AFFWEERDIMAHANSEWIVQLHFAFQDAKSL 81
+L+K R T L+AL IK+S + + E ++ E IV L ++
Sbjct: 26 FLVKQRLTGKLFALKC----IKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHY 81
Query: 82 YMVMDYMPGGDLVNLMSNYDV-PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLL-- 138
Y+VM + GG+L + + V EK A +V+ A+ +H G VHRD+KP+N+L
Sbjct: 82 YLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLT 141
Query: 139 -DKHGHLKLADFGTCMRMNKTGTETKRLGRNG 169
+++ + + DFG +M + G + G G
Sbjct: 142 PEENSKIMITDFGLS-KMEQNGIMSTACGTPG 172
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 54/84 (64%), Gaps = 2/84 (2%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLGF 126
I++L+ + + MV++Y G +L + + D + E+ A+ + +++ A++ H
Sbjct: 70 IIKLYDVIKSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKI 128
Query: 127 VHRDVKPDNMLLDKHGHLKLADFG 150
VHRD+KP+N+LLD+H ++K+ADFG
Sbjct: 129 VHRDLKPENLLLDEHLNVKIADFG 152
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 42 YFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD 101
+ +IK + E ++ NS +IV + AF + + M++M GG L ++
Sbjct: 40 HLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG 99
Query: 102 -VPEKWAKFYCAEVVLALDAIHCL-GFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
+PE+ V+ L + +HRDVKP N+L++ G +KL DFG ++
Sbjct: 100 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 155
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 42 YFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD 101
+ +IK + E ++ NS +IV + AF + + M++M GG L ++
Sbjct: 40 HLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG 99
Query: 102 -VPEKWAKFYCAEVVLALDAIHCL-GFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
+PE+ V+ L + +HRDVKP N+L++ G +KL DFG ++
Sbjct: 100 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 155
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 42 YFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD 101
+ +IK + E ++ NS +IV + AF + + M++M GG L ++
Sbjct: 59 HLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG 118
Query: 102 -VPEKWAKFYCAEVVLALDAIHCL-GFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
+PE+ V+ L + +HRDVKP N+L++ G +KL DFG ++
Sbjct: 119 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 174
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVL-ALDAIHCLGF 126
IV+LH + Q+ Y+V D + GG+L + + + +C + +L ++ H G
Sbjct: 90 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 149
Query: 127 VHRDVKPDNMLL---DKHGHLKLADFGTCMRMNKT 158
VHR++KP+N+LL K +KLADFG + +N +
Sbjct: 150 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 184
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD- 101
D F E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPE-TVYRVARHYSR 114
Query: 102 ----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 115 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVL-ALDAIHCLGF 126
IV+LH + Q+ Y+V D + GG+L + + + +C + +L ++ H G
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 126
Query: 127 VHRDVKPDNMLL---DKHGHLKLADFGTCMRMNKT 158
VHR++KP+N+LL K +KLADFG + +N +
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 42 YFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD 101
+ +IK + E ++ NS +IV + AF + + M++M GG L ++
Sbjct: 40 HLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG 99
Query: 102 -VPEKWAKFYCAEVVLALDAIHCL-GFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
+PE+ V+ L + +HRDVKP N+L++ G +KL DFG ++
Sbjct: 100 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 155
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 42 YFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD 101
+ +IK + E ++ NS +IV + AF + + M++M GG L ++
Sbjct: 40 HLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAG 99
Query: 102 -VPEKWAKFYCAEVVLALDAIHCL-GFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
+PE+ V+ L + +HRDVKP N+L++ G +KL DFG ++
Sbjct: 100 RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 155
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVL-ALDAIHCLGF 126
IV+LH + Q+ Y+V D + GG+L + + + +C + +L ++ H G
Sbjct: 66 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 125
Query: 127 VHRDVKPDNMLL---DKHGHLKLADFGTCMRMNKT 158
VHR++KP+N+LL K +KLADFG + +N +
Sbjct: 126 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 160
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVL-ALDAIHCLGF 126
IV+LH + Q+ Y+V D + GG+L + + + +C + +L ++ H G
Sbjct: 67 IVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGI 126
Query: 127 VHRDVKPDNMLL---DKHGHLKLADFGTCMRMNKT 158
VHR++KP+N+LL K +KLADFG + +N +
Sbjct: 127 VHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDS 161
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 61/123 (49%), Gaps = 4/123 (3%)
Query: 48 SDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKW 106
S+S +E ++ + I++L+ F+D ++ Y+VM+ GG+L + ++ E
Sbjct: 46 SNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVD 105
Query: 107 AKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGH---LKLADFGTCMRMNKTGTETK 163
A +V+ +H VHRD+KP+N+LL+ +K+ DFG G +
Sbjct: 106 AAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKE 165
Query: 164 RLG 166
RLG
Sbjct: 166 RLG 168
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A S+ Y+V M G DL N++ + ++
Sbjct: 75 YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSDEHV 133
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGT 160
+F +++ L IH G +HRD+KP N+ +++ L++ DFG + ++ T
Sbjct: 134 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMT 186
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 2/116 (1%)
Query: 42 YFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD 101
+ +IK + E ++ NS +IV + AF + + M++M GG L ++
Sbjct: 50 HLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAK 109
Query: 102 -VPEKWAKFYCAEVVLALDAIHCL-GFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
+PE+ V+ L + +HRDVKP N+L++ G +KL DFG ++
Sbjct: 110 RIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL 165
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 8/100 (8%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLV-NLMSNYDV----PEKWAKFYCAEVVLALDAIH 122
IV+L + LYMV ++M G DL ++ D E A Y +++ AL H
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 123 CLGFVHRDVKPDNMLL---DKHGHLKLADFGTCMRMNKTG 159
+HRDVKP+N+LL + +KL DFG +++ ++G
Sbjct: 148 DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESG 187
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 11/160 (6%)
Query: 2 KNVEAFMHRYRRYRQKYSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMA 61
+ V H+ R R + EV R+ + ++ + + F++ EE A
Sbjct: 69 EEVHWMTHQPRLGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV---------EELVACA 119
Query: 62 HANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDA 120
+S IV L+ A ++ + + M+ + GG L L+ +PE A +Y + + L+
Sbjct: 120 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEY 179
Query: 121 IHCLGFVHRDVKPDNMLLDKHG-HLKLADFGTCMRMNKTG 159
+H +H DVK DN+LL G L DFG + + G
Sbjct: 180 LHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 219
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 11/160 (6%)
Query: 2 KNVEAFMHRYRRYRQKYSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMA 61
+ V H+ R R + EV R+ + ++ + + F++ EE A
Sbjct: 55 EEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV---------EELVACA 105
Query: 62 HANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDA 120
+S IV L+ A ++ + + M+ + GG L L+ +PE A +Y + + L+
Sbjct: 106 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEY 165
Query: 121 IHCLGFVHRDVKPDNMLLDKHG-HLKLADFGTCMRMNKTG 159
+H +H DVK DN+LL G L DFG + + G
Sbjct: 166 LHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 205
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 51 AFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD--- 101
AF E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 58 AFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 116
Query: 102 --VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 58/117 (49%), Gaps = 13/117 (11%)
Query: 51 AFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD--- 101
AF E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 58 AFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSRAK 116
Query: 102 --VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 117 QTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 71/160 (44%), Gaps = 11/160 (6%)
Query: 2 KNVEAFMHRYRRYRQKYSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMA 61
+ V H+ R R + EV R+ + ++ + + F++ EE A
Sbjct: 71 EEVHWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVFRV---------EELVACA 121
Query: 62 HANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDA 120
+S IV L+ A ++ + + M+ + GG L L+ +PE A +Y + + L+
Sbjct: 122 GLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEY 181
Query: 121 IHCLGFVHRDVKPDNMLLDKHG-HLKLADFGTCMRMNKTG 159
+H +H DVK DN+LL G L DFG + + G
Sbjct: 182 LHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDG 221
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 57 RDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVV 115
R + H + I+ L +++ + +++V D M G+L + L + EK + ++
Sbjct: 154 RQVAGHPH---IITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLL 210
Query: 116 LALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
A+ +H VHRD+KP+N+LLD + ++L+DFG
Sbjct: 211 EAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFG 245
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD- 101
D F E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSR 114
Query: 102 ----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 115 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD- 101
D F E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 57 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSR 115
Query: 102 ----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 116 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 174
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD- 101
D F E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSR 114
Query: 102 ----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 115 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD- 101
D F E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 60 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSR 118
Query: 102 ----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 119 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 177
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD- 101
D F E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 69 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSR 127
Query: 102 ----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 128 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 186
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD- 101
D F E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 56 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSR 114
Query: 102 ----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 115 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 173
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD- 101
D F E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 64 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSR 122
Query: 102 ----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 123 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 181
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 86/170 (50%), Gaps = 27/170 (15%)
Query: 13 RYRQKYSEVPRL----FEYLLKYRYTLYALYSRYFQIKR-----SDSAFFWEERDIMAHA 63
RY + E+ L F ++K R AL SRY+ IK+ + E ++A
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARN---ALDSRYYAIKKIRHTEEKLSTILSEVMLLASL 59
Query: 64 NSEWIVQLHFAFQDAK-------------SLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY 110
N +++V+ + A+ + + +L++ M+Y L +L+ + ++ ++ +++
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 111 --CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKT 158
+++ AL IH G +HRD+KP N+ +D+ ++K+ DFG ++++
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRS 169
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD- 101
D F E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 75 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSR 133
Query: 102 ----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 134 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 192
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD- 101
D F E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 90 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSR 148
Query: 102 ----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 149 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 71 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 129
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFG 172
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD- 101
D F E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 68 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSR 126
Query: 102 ----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 127 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD- 101
D F E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 92 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSR 150
Query: 102 ----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 151 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 209
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 69 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQKLTDDHV 127
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFG 170
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD- 101
D F E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 61 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSR 119
Query: 102 ----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 120 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 178
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD- 101
D F E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 84 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSR 142
Query: 102 ----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 143 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 201
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD- 101
D F E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 94 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSR 152
Query: 102 ----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 153 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 211
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD- 101
D F E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 135 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSR 193
Query: 102 ----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 194 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 252
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD- 101
D F E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 68 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSR 126
Query: 102 ----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 127 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 185
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 75 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 133
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDSELKILDFG 176
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDV-PEKWAKFYC 111
F +E +IM + I++L+ F+D +Y+VM+ GG+L + + V E A
Sbjct: 70 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIM 129
Query: 112 AEVVLALDAIHCLGFVHRDVKPDNMLL---DKHGHLKLADFGTCMR 154
+V+ A+ H L HRD+KP+N L LKL DFG R
Sbjct: 130 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 175
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 13/119 (10%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNYD- 101
D F E IM + IV+L + F +D L +V+DY+P + + +Y
Sbjct: 90 DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPE-TVYRVARHYSR 148
Query: 102 ----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK-HGHLKLADFGTCMRM 155
+P + K Y ++ +L IH G HRD+KP N+LLD LKL DFG+ ++
Sbjct: 149 AKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQL 207
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A S+ Y+V M G DL N++ + ++
Sbjct: 67 YRELRLLKHLKHENVIGLLDVFTPATSIEDFSEVYLVTTLM-GADLNNIVKCQALSDEHV 125
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGT 160
+F +++ L IH G +HRD+KP N+ +++ L++ DFG + ++ T
Sbjct: 126 QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMT 178
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDV-PEKWAKFYC 111
F +E +IM + I++L+ F+D +Y+VM+ GG+L + + V E A
Sbjct: 53 FKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIM 112
Query: 112 AEVVLALDAIHCLGFVHRDVKPDNMLL---DKHGHLKLADFGTCMR 154
+V+ A+ H L HRD+KP+N L LKL DFG R
Sbjct: 113 KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAAR 158
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 4/130 (3%)
Query: 41 RYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSN 99
R + S ++ EE ++ + I++L+ F+D ++ Y+VM+ GG+L + ++
Sbjct: 71 RKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHR 130
Query: 100 YDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLL---DKHGHLKLADFGTCMRMN 156
E A +V+ + +H VHRD+KP+N+LL +K +K+ DFG
Sbjct: 131 MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFE 190
Query: 157 KTGTETKRLG 166
+RLG
Sbjct: 191 NQKKMKERLG 200
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 69 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKXQKLTDDHV 127
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 170
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 52/97 (53%), Gaps = 14/97 (14%)
Query: 60 MAHANSEWIVQLHFAFQDAKSLYMVMDYMPGG------DLVNLMSNYDVPEKWAKFYCAE 113
+ HAN IV LH KSL +V +Y+ D N+++ ++V K + +
Sbjct: 57 LKHAN---IVTLHDIIHTEKSLTLVFEYLDKDLKQYLDDCGNIINMHNV-----KLFLFQ 108
Query: 114 VVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ L H +HRD+KP N+L+++ G LKLADFG
Sbjct: 109 LLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFG 145
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVL-A 117
++ H+N IV+LH + + Y+V D + GG+L + + + +C + +L A
Sbjct: 59 LLKHSN---IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEA 115
Query: 118 LDAIHCLGFVHRDVKPDNMLLD---KHGHLKLADFGTCMRMN 156
+ H +G VHRD+KP+N+LL K +KLADFG + +
Sbjct: 116 VLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ 157
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQ----IKRSDSAFFWEERDIMAHANSEWIVQLHF 73
Y V F+ +R + L SR FQ KR+ + E ++ H E ++ L
Sbjct: 54 YGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRT-----YRELRLLKHMKHENVIGLLD 107
Query: 74 AFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFV 127
F A+SL Y+V M G DL N++ + + +F +++ L IH +
Sbjct: 108 VFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 166
Query: 128 HRDVKPDNMLLDKHGHLKLADFG 150
HRD+KP N+ +++ LK+ DFG
Sbjct: 167 HRDLKPSNLAVNEDCELKILDFG 189
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 61/141 (43%), Gaps = 14/141 (9%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-------LMSNYD--VP 103
F E I+ +E+ + + +Y++ +YM ++ L NY +P
Sbjct: 90 FKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIP 149
Query: 104 EKWAKFYCAEVVLALDAIHC-LGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTET 162
+ K V+ + IH HRDVKP N+L+DK+G +KL+DFG M +
Sbjct: 150 IQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM----VDK 205
Query: 163 KRLGRNGIEEIKAHPFFINDQ 183
K G G E FF N+
Sbjct: 206 KIKGSRGTYEFMPPEFFSNES 226
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQ----IKRSDSAFFWEERDIMAHANSEWIVQLHF 73
Y V F+ +R + L SR FQ KR+ + E ++ H E ++ L
Sbjct: 55 YGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRT-----YRELRLLKHMKHENVIGLLD 108
Query: 74 AFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFV 127
F A+SL Y+V M G DL N++ + + +F +++ L IH +
Sbjct: 109 VFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 167
Query: 128 HRDVKPDNMLLDKHGHLKLADFG 150
HRD+KP N+ +++ LK+ DFG
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFG 190
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGF 126
I+ L + D K +Y+V + M GG+L++ ++ E+ A F + ++ +H G
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGV 142
Query: 127 VHRDVKPDNML-LDKHGH---LKLADFG 150
VHRD+KP N+L +D+ G+ L++ DFG
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFG 170
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQ----IKRSDSAFFWEERDIMAHANSEWIVQLHF 73
Y V F+ +R + L SR FQ KR+ + E ++ H E ++ L
Sbjct: 55 YGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRT-----YRELRLLKHMKHENVIGLLD 108
Query: 74 AFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFV 127
F A+SL Y+V M G DL N++ + + +F +++ L IH +
Sbjct: 109 VFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 167
Query: 128 HRDVKPDNMLLDKHGHLKLADFG 150
HRD+KP N+ +++ LK+ DFG
Sbjct: 168 HRDLKPSNLAVNEDCELKILDFG 190
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 5/88 (5%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGF 126
I+ L + D K +Y+V + M GG+L++ ++ E+ A F + ++ +H G
Sbjct: 83 IITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGV 142
Query: 127 VHRDVKPDNML-LDKHGH---LKLADFG 150
VHRD+KP N+L +D+ G+ L++ DFG
Sbjct: 143 VHRDLKPSNILYVDESGNPECLRICDFG 170
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 51.6 bits (122), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQ----IKRSDSAFFWEERDIMAHANSEWIVQLHF 73
Y V F+ +R + L SR FQ KR+ + E ++ H E ++ L
Sbjct: 35 YGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRT-----YRELRLLKHMKHENVIGLLD 88
Query: 74 AFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFV 127
F A+SL Y+V M G DL N++ + + +F +++ L IH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 128 HRDVKPDNMLLDKHGHLKLADFG 150
HRD+KP N+ +++ LK+ DFG
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFG 170
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 74 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 132
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFG 175
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 69 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 127
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 170
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQ----IKRSDSAFFWEERDIMAHANSEWIVQLHF 73
Y V F+ +R + L SR FQ KR+ + E ++ H E ++ L
Sbjct: 35 YGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRT-----YRELRLLKHMKHENVIGLLD 88
Query: 74 AFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFV 127
F A+SL Y+V M G DL N++ + + +F +++ L IH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 128 HRDVKPDNMLLDKHGHLKLADFG 150
HRD+KP N+ +++ LK+ DFG
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFG 170
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQ----IKRSDSAFFWEERDIMAHANSEWIVQLHF 73
Y V F+ +R + L SR FQ KR+ + E ++ H E ++ L
Sbjct: 35 YGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRT-----YRELRLLKHMKHENVIGLLD 88
Query: 74 AFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFV 127
F A+SL Y+V M G DL N++ + + +F +++ L IH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 128 HRDVKPDNMLLDKHGHLKLADFG 150
HRD+KP N+ +++ LK+ DFG
Sbjct: 148 HRDLKPSNLAVNEDCELKILDFG 170
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 80 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 138
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 139 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFG 181
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 74 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 132
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDXELKILDFG 175
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQ----IKRSDSAFFWEERDIMAHANSEWIVQLHF 73
Y V F+ +R + L SR FQ KR+ + E ++ H E ++ L
Sbjct: 45 YGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRT-----YRELRLLKHMKHENVIGLLD 98
Query: 74 AFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFV 127
F A+SL Y+V M G DL N++ + + +F +++ L IH +
Sbjct: 99 VFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 157
Query: 128 HRDVKPDNMLLDKHGHLKLADFG 150
HRD+KP N+ +++ LK+ DFG
Sbjct: 158 HRDLKPSNLAVNEDCELKILDFG 180
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQ----IKRSDSAFFWEERDIMAHANSEWIVQLHF 73
Y V F+ +R + L SR FQ KR+ + E ++ H E ++ L
Sbjct: 31 YGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRT-----YRELRLLKHMKHENVIGLLD 84
Query: 74 AFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFV 127
F A+SL Y+V M G DL N++ + + +F +++ L IH +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 128 HRDVKPDNMLLDKHGHLKLADFG 150
HRD+KP N+ +++ LK+ DFG
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFG 166
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVL-A 117
++ H N IV+LH + + Y+V D + GG+L + + + +C + +L +
Sbjct: 59 LLKHPN---IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILES 115
Query: 118 LDAIHCLGFVHRDVKPDNMLL---DKHGHLKLADFGTCMRMN 156
++ H G VHRD+KP+N+LL K +KLADFG + +
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ 157
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQ----IKRSDSAFFWEERDIMAHANSEWIVQLHF 73
Y V F+ +R + L SR FQ KR+ + E ++ H E ++ L
Sbjct: 41 YGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRT-----YRELRLLKHMKHENVIGLLD 94
Query: 74 AFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFV 127
F A+SL Y+V M G DL N++ + + +F +++ L IH +
Sbjct: 95 VFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 128 HRDVKPDNMLLDKHGHLKLADFG 150
HRD+KP N+ +++ LK+ DFG
Sbjct: 154 HRDLKPSNLAVNEDCELKILDFG 176
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQ----IKRSDSAFFWEERDIMAHANSEWIVQLHF 73
Y V F+ +R + L SR FQ KR+ + E ++ H E ++ L
Sbjct: 31 YGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRT-----YRELRLLKHMKHENVIGLLD 84
Query: 74 AFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFV 127
F A+SL Y+V M G DL N++ + + +F +++ L IH +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 128 HRDVKPDNMLLDKHGHLKLADFG 150
HRD+KP N+ +++ LK+ DFG
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFG 166
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 92 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 150
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 151 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 193
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 65 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 123
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 124 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 166
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 67/143 (46%), Gaps = 17/143 (11%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQ----IKRSDSAFFWEERDIMAHANSEWIVQLHF 73
Y V F+ +R + L SR FQ KR+ + E ++ H E ++ L
Sbjct: 31 YGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRT-----YRELRLLKHMKHENVIGLLD 84
Query: 74 AFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFV 127
F A+SL Y+V M G DL N++ + + +F +++ L IH +
Sbjct: 85 VFTPARSLEEFNDVYLVTHLM-GADLNNIVKCAKLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 128 HRDVKPDNMLLDKHGHLKLADFG 150
HRD+KP N+ +++ LK+ DFG
Sbjct: 144 HRDLKPSNLAVNEDCELKILDFG 166
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 81 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 139
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 182
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 71 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 129
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 172
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 66 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 124
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 125 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 167
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 69 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 127
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 170
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 76 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 134
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 177
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 81 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 139
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 182
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 74 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 132
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 175
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 71 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 129
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 172
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 68 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 126
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 127 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 169
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 69 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 127
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 170
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 81 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 139
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 140 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 182
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 76 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 134
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 177
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 67 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 125
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 126 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 168
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 71 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 129
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 130 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 172
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 76 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 134
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 177
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 69 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 127
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 170
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 80 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 138
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 139 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 181
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 74 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 132
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 133 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 175
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 69 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 127
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 170
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 69 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 127
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 170
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 69 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 127
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 170
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 59/132 (44%), Gaps = 12/132 (9%)
Query: 40 SRYFQIKRSDSAFFWEE---RDIMAHANSEWI------VQLHFAFQDAKSLYMVMDYMPG 90
R + +KRS S F + R + + E + V+L A+++ LY+ + + G
Sbjct: 82 GRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTE-LCG 140
Query: 91 GDLVNLMSNY--DVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLAD 148
L + +PE Y + +LAL +H G VH DVKP N+ L G KL D
Sbjct: 141 PSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGD 200
Query: 149 FGTCMRMNKTGT 160
FG + + G
Sbjct: 201 FGLLVELGTAGA 212
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 88 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 146
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 147 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 189
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 51.6 bits (122), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 76 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 134
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 135 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 177
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 75 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 133
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 176
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 69 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 127
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 170
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 89 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 147
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 148 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 190
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 66 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 124
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 125 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 167
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 69 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 127
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 170
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 92 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 150
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 151 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 193
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVL-A 117
++ H N IV+LH + + Y++ D + GG+L + + + +C + +L A
Sbjct: 77 LLKHPN---IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA 133
Query: 118 LDAIHCLGFVHRDVKPDNMLLD---KHGHLKLADFGTCMRM 155
+ H +G VHRD+KP+N+LL K +KLADFG + +
Sbjct: 134 VLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEV 174
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGF 126
IV+LH F D ++VM+ + GG+L + E A + ++V A+ +H +G
Sbjct: 68 IVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGV 127
Query: 127 VHRDVKPDNMLL-DKHGHL--KLADFG 150
VHRD+KP+N+L D++ +L K+ DFG
Sbjct: 128 VHRDLKPENLLFTDENDNLEIKIIDFG 154
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A SL Y+V M G DL N++ + +
Sbjct: 98 YRELRLLKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 156
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 157 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 199
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 75 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 133
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ DFG
Sbjct: 134 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFG 176
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 55/102 (53%), Gaps = 7/102 (6%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVL-A 117
++ H N IV+LH + + Y+V D + GG+L + + + +C + +L +
Sbjct: 59 LLKHPN---IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILES 115
Query: 118 LDAIHCLGFVHRDVKPDNMLL---DKHGHLKLADFGTCMRMN 156
++ H G VHRD+KP+N+LL K +KLADFG + +
Sbjct: 116 VNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQ 157
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 12/144 (8%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCA 112
+E DI+ E I++ +DA SL +VM+Y+P G L + + + + +
Sbjct: 82 QEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ 141
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGRNG--- 169
++ + +H ++HRD+ N+LLD +K+ DFG + + G E R+ +G
Sbjct: 142 QICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE-GHEXYRVREDGDSP 200
Query: 170 -----IEEIKAHPF-FINDQWTFS 187
E +K + F + +D W+F
Sbjct: 201 VFWYAPECLKEYKFYYASDVWSFG 224
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 53/101 (52%), Gaps = 5/101 (4%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-----VPEKWAKF 109
+E D++ N +++ + +F + L +V++ GDL ++ ++ +PE+
Sbjct: 81 KEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWK 140
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
Y ++ AL+ +H +HRD+KP N+ + G +KL D G
Sbjct: 141 YFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLG 181
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 50.8 bits (120), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 76/169 (44%), Gaps = 8/169 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEV 114
E ++ E IV L ++ LY+VM + GG+L + ++ EK A +V
Sbjct: 70 EIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQV 129
Query: 115 VLALDAIHCLGFVHRDVKPDNMLL---DKHGHLKLADFGTCMRMNKTGTETKRLGRNGI- 170
+ A+ +H +G VHRD+KP+N+L D+ + ++DFG K + G G
Sbjct: 130 LDAVYYLHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYV 189
Query: 171 --EEIKAHPFF-INDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
E + P+ D W+ + + P ++D+ F+ I K E
Sbjct: 190 APEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAE 238
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFY 110
F EE +M + + E +VQL+ + ++++ +YM G L+N + + +
Sbjct: 46 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 105
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
C +V A++ + F+HRD+ N L++ G +K++DFG
Sbjct: 106 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 145
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 85/170 (50%), Gaps = 27/170 (15%)
Query: 13 RYRQKYSEVPRL----FEYLLKYRYTLYALYSRYFQIKR-----SDSAFFWEERDIMAHA 63
RY + E+ L F ++K R AL SRY+ IK+ + E ++A
Sbjct: 3 RYASDFEEIAVLGQGAFGQVVKARN---ALDSRYYAIKKIRHTEEKLSTILSEVXLLASL 59
Query: 64 NSEWIVQLHFAFQDAK-------------SLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY 110
N +++V+ + A+ + + +L++ +Y L +L+ + ++ ++ +++
Sbjct: 60 NHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYW 119
Query: 111 --CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKT 158
+++ AL IH G +HR++KP N+ +D+ ++K+ DFG ++++
Sbjct: 120 RLFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRS 169
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 93 LVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD-KHGHLKLADFGT 151
L +++YD+ +FY E++ ALD H +G +HRDVKP N+L+D +H L+L D+G
Sbjct: 124 LYQTLTDYDI-----RFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGL 178
Query: 152 C 152
Sbjct: 179 A 179
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVP--EKWAKFYCAEVVLALDAIHCLG 125
I++L+ F+D+ +Y+V++ G++ + N P E A+ + +++ + +H G
Sbjct: 73 ILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHG 132
Query: 126 FVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
+HRD+ N+LL ++ ++K+ADFG ++
Sbjct: 133 ILHRDLTLSNLLLTRNMNIKIADFGLATQL 162
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 50.4 bits (119), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 51/84 (60%), Gaps = 2/84 (2%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGF 126
I++L+ + MV++Y GG+L + ++ + E + + +++ A++ H
Sbjct: 71 IIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKI 129
Query: 127 VHRDVKPDNMLLDKHGHLKLADFG 150
VHRD+KP+N+LLD + ++K+ADFG
Sbjct: 130 VHRDLKPENLLLDDNLNVKIADFG 153
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFY 110
F EE +M + + E +VQL+ + ++++ +YM G L+N + + +
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 125
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
C +V A++ + F+HRD+ N L++ G +K++DFG
Sbjct: 126 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 165
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 62/120 (51%), Gaps = 4/120 (3%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM-- 97
+++ ++K +D +E I+ A I+ LH +F+ + L M+ +++ G D+ +
Sbjct: 35 AKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDIFERINT 94
Query: 98 SNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD--KHGHLKLADFGTCMRM 155
S +++ E+ Y +V AL +H H D++P+N++ + +K+ +FG ++
Sbjct: 95 SAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQL 154
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFY 110
F EE +M + + E +VQL+ + ++++ +YM G L+N + + +
Sbjct: 66 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 125
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
C +V A++ + F+HRD+ N L++ G +K++DFG
Sbjct: 126 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 165
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFY 110
F EE +M + + E +VQL+ + ++++ +YM G L+N + + +
Sbjct: 51 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 110
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
C +V A++ + F+HRD+ N L++ G +K++DFG
Sbjct: 111 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 150
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 50.4 bits (119), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFY 110
F EE +M + + E +VQL+ + ++++ +YM G L+N + + +
Sbjct: 50 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 109
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
C +V A++ + F+HRD+ N L++ G +K++DFG
Sbjct: 110 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 149
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFY 110
F EE +M + + E +VQL+ + ++++ +YM G L+N + + +
Sbjct: 51 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 110
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
C +V A++ + F+HRD+ N L++ G +K++DFG
Sbjct: 111 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 150
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 53/100 (53%), Gaps = 2/100 (2%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFY 110
F EE +M + + E +VQL+ + ++++ +YM G L+N + + +
Sbjct: 57 FIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEM 116
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
C +V A++ + F+HRD+ N L++ G +K++DFG
Sbjct: 117 CKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFG 156
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Query: 46 KRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPE 104
K D++ E +++ + I++L +D+ S Y+V + GG+L + ++ E
Sbjct: 61 KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE 120
Query: 105 KWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLL---DKHGHLKLADFG--TCMRMN 156
A +V + +H VHRD+KP+N+LL +K +K+ DFG TC + N
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 52/103 (50%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 69 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 127
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ D+G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDYG 170
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 53/88 (60%), Gaps = 5/88 (5%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLGF 126
I+ LH +++ + ++++ + GG+L + ++ + + E+ A + +++ ++ +H
Sbjct: 77 IITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 127 VHRDVKPDN-MLLDKH---GHLKLADFG 150
H D+KP+N MLLDK+ H+KL DFG
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFG 164
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 55/101 (54%), Gaps = 7/101 (6%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVL-A 117
++ H N IV+LH + + Y++ D + GG+L + + + +C + +L A
Sbjct: 66 LLKHPN---IVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEA 122
Query: 118 LDAIHCLGFVHRDVKPDNMLLD---KHGHLKLADFGTCMRM 155
+ H +G VHR++KP+N+LL K +KLADFG + +
Sbjct: 123 VLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV 163
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Query: 46 KRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPE 104
K D++ E +++ + I++L +D+ S Y+V + GG+L + ++ E
Sbjct: 61 KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE 120
Query: 105 KWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLL---DKHGHLKLADFG--TCMRMN 156
A +V + +H VHRD+KP+N+LL +K +K+ DFG TC + N
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 59/117 (50%), Gaps = 6/117 (5%)
Query: 46 KRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPE 104
K D++ E +++ + I++L +D+ S Y+V + GG+L + ++ E
Sbjct: 61 KNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSE 120
Query: 105 KWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLL---DKHGHLKLADFG--TCMRMN 156
A +V + +H VHRD+KP+N+LL +K +K+ DFG TC + N
Sbjct: 121 HDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN 177
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 93 LVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD-KHGHLKLADFGT 151
L +++YD+ +FY E++ ALD H +G +HRDVKP N+++D +H L+L D+G
Sbjct: 124 LYQTLTDYDI-----RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 152 C 152
Sbjct: 179 A 179
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 93 LVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD-KHGHLKLADFGT 151
L +++YD+ +FY E++ ALD H +G +HRDVKP N+++D +H L+L D+G
Sbjct: 124 LYQTLTDYDI-----RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 152 C 152
Sbjct: 179 A 179
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 93 LVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD-KHGHLKLADFGT 151
L +++YD+ +FY E++ ALD H +G +HRDVKP N+++D +H L+L D+G
Sbjct: 124 LYQTLTDYDI-----RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 152 C 152
Sbjct: 179 A 179
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 93 LVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD-KHGHLKLADFGT 151
L +++YD+ +FY E++ ALD H +G +HRDVKP N+++D +H L+L D+G
Sbjct: 124 LYQTLTDYDI-----RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 152 C 152
Sbjct: 179 A 179
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 93 LVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD-KHGHLKLADFGT 151
L +++YD+ +FY E++ ALD H +G +HRDVKP N+++D +H L+L D+G
Sbjct: 124 LYQTLTDYDI-----RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 152 C 152
Sbjct: 179 A 179
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 93 LVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD-KHGHLKLADFGT 151
L +++YD+ +FY E++ ALD H +G +HRDVKP N+++D +H L+L D+G
Sbjct: 124 LYQTLTDYDI-----RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 152 C 152
Sbjct: 179 A 179
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 93 LVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD-KHGHLKLADFGT 151
L +++YD+ +FY E++ ALD H +G +HRDVKP N+++D +H L+L D+G
Sbjct: 124 LYQTLTDYDI-----RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 152 C 152
Sbjct: 179 A 179
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 93 LVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD-KHGHLKLADFGT 151
L +++YD+ +FY E++ ALD H +G +HRDVKP N+++D +H L+L D+G
Sbjct: 129 LYQTLTDYDI-----RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 183
Query: 152 C 152
Sbjct: 184 A 184
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 93 LVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD-KHGHLKLADFGT 151
L +++YD+ +FY E++ ALD H +G +HRDVKP N+++D +H L+L D+G
Sbjct: 123 LYQTLTDYDI-----RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 177
Query: 152 C 152
Sbjct: 178 A 178
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 93 LVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD-KHGHLKLADFGT 151
L +++YD+ +FY E++ ALD H +G +HRDVKP N+++D +H L+L D+G
Sbjct: 123 LYQTLTDYDI-----RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 177
Query: 152 C 152
Sbjct: 178 A 178
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 93 LVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD-KHGHLKLADFGT 151
L +++YD+ +FY E++ ALD H +G +HRDVKP N+++D +H L+L D+G
Sbjct: 124 LYQTLTDYDI-----RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 152 C 152
Sbjct: 179 A 179
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 93 LVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD-KHGHLKLADFGT 151
L +++YD+ +FY E++ ALD H +G +HRDVKP N+++D +H L+L D+G
Sbjct: 122 LYQTLTDYDI-----RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 176
Query: 152 C 152
Sbjct: 177 A 177
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 79 KSLYMVMDYMPGGDLVN------LMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVK 132
K L ++M+Y+P D ++ + S +P Y ++ A+ IH LG HRD+K
Sbjct: 111 KYLNVIMEYVP--DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIK 168
Query: 133 PDNMLLD-KHGHLKLADFGTCMRM 155
P N+L++ K LKL DFG+ ++
Sbjct: 169 PQNLLVNSKDNTLKLCDFGSAKKL 192
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLV-NLMSNYDVPEKWAKFYCAEVVLALDAIHCLGF 126
I++L F+D K Y+V ++ GG+L +++ + E A +++ + +H
Sbjct: 108 IIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLHKHNI 167
Query: 127 VHRDVKPDNMLLDKHGHL---KLADFGTCMRMNKTGTETKRLG 166
VHRD+KP+N+LL+ L K+ DFG +K RLG
Sbjct: 168 VHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLG 210
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 93 LVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD-KHGHLKLADFGT 151
L +++YD+ +FY E++ ALD H +G +HRDVKP N+++D +H L+L D+G
Sbjct: 124 LYQTLTDYDI-----RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 152 C 152
Sbjct: 179 A 179
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGF 126
IV L ++ LY++M + GG+L + ++ E+ A +V+ A+ +H LG
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 127 VHRDVKPDNML---LDKHGHLKLADFGTCMRMNKTGTETKRLGRNGI---EEIKAHPFF- 179
VHRD+KP+N+L LD+ + ++DFG + + G G E + P+
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 180 INDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
D W+ + + P ++D F+ I K E
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGF 126
IV L ++ LY++M + GG+L + ++ E+ A +V+ A+ +H LG
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 127 VHRDVKPDNML---LDKHGHLKLADFGTCMRMNKTGTETKRLGRNGI---EEIKAHPFF- 179
VHRD+KP+N+L LD+ + ++DFG + + G G E + P+
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 180 INDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
D W+ + + P ++D F+ I K E
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%), Gaps = 6/61 (9%)
Query: 93 LVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD-KHGHLKLADFGT 151
L +++YD+ +FY E++ ALD H +G +HRDVKP N+++D +H L+L D+G
Sbjct: 124 LRQTLTDYDI-----RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL 178
Query: 152 C 152
Sbjct: 179 A 179
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGF 126
IV L ++ LY++M + GG+L + ++ E+ A +V+ A+ +H LG
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 127 VHRDVKPDNML---LDKHGHLKLADFGTCMRMNKTGTETKRLGRNGI---EEIKAHPFF- 179
VHRD+KP+N+L LD+ + ++DFG + + G G E + P+
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 180 INDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
D W+ + + P ++D F+ I K E
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 60 MAHANSEWIVQLHFAFQDAKSLYMVMDYMPGG--DLVNLMSNYDVPEKWAKFYCAEVVLA 117
+ H N +V + + ++ + +YMVM+Y G ++++ + P A Y +++
Sbjct: 63 LRHKNVIQLVDVLYN-EEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDG 121
Query: 118 LDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGT 151
L+ +H G VH+D+KP N+LL G LK++ G
Sbjct: 122 LEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGV 155
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLGF 126
++ LH +++ + ++++ + GG+L + ++ + + E+ A + +++ ++ +H
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 127 VHRDVKPDN-MLLDKH---GHLKLADFGTCMRMNKTGTETKRL 165
H D+KP+N MLLDK+ H+KL DFG + + G E K +
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNI 178
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLGF 126
++ LH +++ + ++++ + GG+L + ++ + + E+ A + +++ ++ +H
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 127 VHRDVKPDN-MLLDKH---GHLKLADFGTCMRMNKTGTETKRL 165
H D+KP+N MLLDK+ H+KL DFG + + G E K +
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNI 178
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLGF 126
++ LH +++ + ++++ + GG+L + ++ + + E+ A + +++ ++ +H
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 127 VHRDVKPDN-MLLDKH---GHLKLADFGTCMRMNKTGTETKRL 165
H D+KP+N MLLDK+ H+KL DFG + + G E K +
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNI 178
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLGF 126
++ LH +++ + ++++ + GG+L + ++ + + E+ A + +++ ++ +H
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 127 VHRDVKPDN-MLLDKH---GHLKLADFGTCMRMNKTGTETKRL 165
H D+KP+N MLLDK+ H+KL DFG + + G E K +
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNI 178
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEV 114
E +I AH + I++L+ F D + +Y++++Y P G+L L + E+ E+
Sbjct: 73 EIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEEL 132
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
AL H +HRD+KP+N+LL G LK+ADFG
Sbjct: 133 ADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFG 168
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAF------QDAKSLYMVMDYMPGGDLVNLMSNY-- 100
D F E IM +V L F +D L +V++Y+P + V S +
Sbjct: 75 DKRFKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLEYVP--ETVYRASRHYA 132
Query: 101 ----DVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD-KHGHLKLADFGTC 152
+P K Y +++ +L IH +G HRD+KP N+LLD G LKL DFG+
Sbjct: 133 KLKQTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSA 189
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A SL Y+VM +M DL +M + E+
Sbjct: 89 YRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDLQKIM-GMEFSEEKI 146
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ +++ L IH G VHRD+KP N+ +++ LK+ DFG
Sbjct: 147 QYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG 189
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLGF 126
++ LH +++ + ++++ + GG+L + ++ + + E+ A + +++ ++ +H
Sbjct: 77 VITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKI 136
Query: 127 VHRDVKPDN-MLLDKH---GHLKLADFGTCMRMNKTGTETKRL 165
H D+KP+N MLLDK+ H+KL DFG + + G E K +
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEI-EDGVEFKNI 178
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 72/157 (45%), Gaps = 8/157 (5%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGF 126
IV L ++ LY++M + GG+L + ++ E+ A +V+ A+ +H LG
Sbjct: 78 IVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGI 137
Query: 127 VHRDVKPDNML---LDKHGHLKLADFGTCMRMNKTGTETKRLGRNGI---EEIKAHPFF- 179
VHRD+KP+N+L LD+ + ++DFG + + G G E + P+
Sbjct: 138 VHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSK 197
Query: 180 INDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDE 216
D W+ + + P ++D F+ I K E
Sbjct: 198 AVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAE 234
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 12/144 (8%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCA 112
+E DI+ E I++ +D KSL +VM+Y+P G L + + + + +
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ 124
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGRNG--- 169
++ + +H ++HR++ N+LLD +K+ DFG + G E R+ +G
Sbjct: 125 QICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGL-AKAVPEGHEYYRVREDGDSP 183
Query: 170 -----IEEIKAHPF-FINDQWTFS 187
E +K + F + +D W+F
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFG 207
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 17/142 (11%)
Query: 18 YSEVPRLFEYLLKYRYTLYALYSRYFQ----IKRSDSAFFWEERDIMAHANSEWIVQLHF 73
Y V F+ +R + L SR FQ KR+ + E ++ H E ++ L
Sbjct: 35 YGSVCAAFDTKTGHRVAVKKL-SRPFQSIIHAKRT-----YRELRLLKHMKHENVIGLLD 88
Query: 74 AFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFV 127
F A+SL Y+V M G DL N++ + + +F +++ L IH +
Sbjct: 89 VFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 128 HRDVKPDNMLLDKHGHLKLADF 149
HRD+KP N+ +++ LK+ DF
Sbjct: 148 HRDLKPSNLAVNEDCELKILDF 169
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 68/144 (47%), Gaps = 12/144 (8%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCA 112
+E DI+ E I++ +D KSL +VM+Y+P G L + + + + +
Sbjct: 65 QEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQ 124
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGRNG--- 169
++ + +H ++HR++ N+LLD +K+ DFG + G E R+ +G
Sbjct: 125 QICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGL-AKAVPEGHEYYRVREDGDSP 183
Query: 170 -----IEEIKAHPF-FINDQWTFS 187
E +K + F + +D W+F
Sbjct: 184 VFWYAPECLKEYKFYYASDVWSFG 207
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 60 MAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM--SNYDVPEKWAKFYCAEVVLA 117
+ H N IV+LH K L +V ++ DL N D+ + K + +++
Sbjct: 58 LKHKN---IVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKG 113
Query: 118 LDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
L H +HRD+KP N+L++++G LKLADFG
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLINRNGELKLADFG 146
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 69 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 127
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ FG
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILGFG 170
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDY--MPGGDLVNLMSNYDVPEKWAKFYCAE 113
E ++ N IV+L LY+V ++ M D ++ + +P K Y +
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQ 114
Query: 114 VVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 115 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 151
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 2/97 (2%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDY--MPGGDLVNLMSNYDVPEKWAKFYCAE 113
E ++ N IV+L LY+V ++ M D ++ + +P K Y +
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQ 113
Query: 114 VVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 114 LLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 150
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 5/88 (5%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGF 126
I+ L + D K +Y+V + M GG+L++ ++ E+ A + ++ +H G
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV 137
Query: 127 VHRDVKPDNML-LDKHGH---LKLADFG 150
VHRD+KP N+L +D+ G+ +++ DFG
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFG 165
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPG--GDLVNLMSNYDVPEKWAKFYCAE 113
E ++ N IV+L LY+V +++ D ++ + +P K Y +
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQ 111
Query: 114 VVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ L H +HRD+KP+N+L++ G +KLADFG
Sbjct: 112 LLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFG 148
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLF 113
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP+N+L++ G +KLADFG
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFG 151
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 69 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 127
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ D G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDAG 170
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 4/92 (4%)
Query: 60 MAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDV-PEKWAKFYCAEVVLAL 118
++H N I+ L AF ++ +V D+M V + N V K Y + L
Sbjct: 69 LSHPN---IIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGL 125
Query: 119 DAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ +H +HRD+KP+N+LLD++G LKLADFG
Sbjct: 126 EYLHQHWILHRDLKPNNLLLDENGVLKLADFG 157
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 56/102 (54%), Gaps = 7/102 (6%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV-NLMSNYDVPEKWAKFYCAEVVLA 117
++ H N IV+LH + + Y+V D + GG+L ++++ E A +++ +
Sbjct: 86 LLKHPN---IVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILES 142
Query: 118 LDAIHCLGFVHRDVKPDNMLLD---KHGHLKLADFGTCMRMN 156
++ IH VHRD+KP+N+LL K +KLADFG + +
Sbjct: 143 VNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQ 184
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLF 111
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP+N+L++ G +KLADFG
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFG 149
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 4/92 (4%)
Query: 60 MAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNL-MSNYDVPEKWAKFYCAEVVLAL 118
+ H N +V L F+ + L++V +Y L L VPE K + + A+
Sbjct: 59 LKHPN---LVNLLEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAV 115
Query: 119 DAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ H +HRDVKP+N+L+ KH +KL DFG
Sbjct: 116 NFCHKHNCIHRDVKPENILITKHSVIKLCDFG 147
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 31/149 (20%)
Query: 39 YSRYFQIKRSDSA--FFWEERDI--MAHANSEWIVQLHFAFQDAK--------------- 79
Y R +I+R W+E D M A + +V ++ K
Sbjct: 19 YGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT 78
Query: 80 --SLYMVMDYMPGGDLVNLMSNYD-----VPEKWAKFYCAEVVLALDAIHCLG-----FV 127
+LY+VM+Y GGDL ++++ + E++ ++ LAL H +
Sbjct: 79 NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVL 138
Query: 128 HRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
HRD+KP N+ LD ++KL DFG +N
Sbjct: 139 HRDLKPANVFLDGKQNVKLGDFGLARILN 167
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVP--------- 103
+E M+ + IV + +F L++VM + GG +++++ +
Sbjct: 60 LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLD 119
Query: 104 EKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETK 163
E EV+ L+ +H G +HRDVK N+LL + G +++ADFG + G T+
Sbjct: 120 ESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 179
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 8/103 (7%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A SL Y+VM +M DL +M E+
Sbjct: 71 YRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVMPFM-QTDLQKIM-GLKFSEEKI 128
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ +++ L IH G VHRD+KP N+ +++ LK+ DFG
Sbjct: 129 QYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFG 171
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDV--PEKWAKFY 110
F +E +MA E +V+L D L +V YMP G L++ +S D P W
Sbjct: 77 FDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW-HMR 135
Query: 111 CAEVVLALDAIHCLG---FVHRDVKPDNMLLDKHGHLKLADFG 150
C A + I+ L +HRD+K N+LLD+ K++DFG
Sbjct: 136 CKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFG 178
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 56/120 (46%), Gaps = 9/120 (7%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVP--------- 103
+E M+ + IV + +F L++VM + GG +++++ +
Sbjct: 55 LLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLD 114
Query: 104 EKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETK 163
E EV+ L+ +H G +HRDVK N+LL + G +++ADFG + G T+
Sbjct: 115 ESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR 174
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 31/149 (20%)
Query: 39 YSRYFQIKRSDSA--FFWEERDI--MAHANSEWIVQLHFAFQDAK--------------- 79
Y R +I+R W+E D M A + +V ++ K
Sbjct: 19 YGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT 78
Query: 80 --SLYMVMDYMPGGDLVNLMSNYD-----VPEKWAKFYCAEVVLALDAIHCLG-----FV 127
+LY+VM+Y GGDL ++++ + E++ ++ LAL H +
Sbjct: 79 NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVL 138
Query: 128 HRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
HRD+KP N+ LD ++KL DFG +N
Sbjct: 139 HRDLKPANVFLDGKQNVKLGDFGLARILN 167
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 69 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 127
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ D G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDRG 170
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDV--PEKWAKFY 110
F +E +MA E +V+L D L +V YMP G L++ +S D P W
Sbjct: 77 FDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW-HMR 135
Query: 111 CAEVVLALDAIHCLG---FVHRDVKPDNMLLDKHGHLKLADFG 150
C A + I+ L +HRD+K N+LLD+ K++DFG
Sbjct: 136 CKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFG 178
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 31/149 (20%)
Query: 39 YSRYFQIKRSDSA--FFWEERDI--MAHANSEWIVQLHFAFQDAK--------------- 79
Y R +I+R W+E D M A + +V ++ K
Sbjct: 19 YGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRT 78
Query: 80 --SLYMVMDYMPGGDLVNLMSNYD-----VPEKWAKFYCAEVVLALDAIHCLG-----FV 127
+LY+VM+Y GGDL ++++ + E++ ++ LAL H +
Sbjct: 79 NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVL 138
Query: 128 HRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
HRD+KP N+ LD ++KL DFG +N
Sbjct: 139 HRDLKPANVFLDGKQNVKLGDFGLARILN 167
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 51/103 (49%), Gaps = 6/103 (5%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDV--PEKWAKFY 110
F +E +MA E +V+L D L +V YMP G L++ +S D P W
Sbjct: 71 FDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSW-HMR 129
Query: 111 CAEVVLALDAIHCLG---FVHRDVKPDNMLLDKHGHLKLADFG 150
C A + I+ L +HRD+K N+LLD+ K++DFG
Sbjct: 130 CKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFG 172
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 13/148 (8%)
Query: 25 FEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMV 84
F + K ++ + + + + AF E R ++ N IV+L+ A + L V
Sbjct: 22 FGVVCKAKWRAKDVAIKQIESESERKAFIVELRQ-LSRVNHPNIVKLYGACLNPVCL--V 78
Query: 85 MDYMPGGDLVNLMSNYD-VP-------EKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNM 136
M+Y GG L N++ + +P W C++ V L ++ +HRD+KP N+
Sbjct: 79 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC-LQCSQGVAYLHSMQPKALIHRDLKPPNL 137
Query: 137 LLDKHGH-LKLADFGTCMRMNKTGTETK 163
LL G LK+ DFGT + T K
Sbjct: 138 LLVAGGTVLKICDFGTACDIQTHMTNNK 165
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 54 WEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDLVNLMSNYDVPEKWA 107
+ E ++ H E ++ L F A+SL Y+V M G DL N++ + +
Sbjct: 69 YRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHV 127
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+F +++ L IH +HRD+KP N+ +++ LK+ D G
Sbjct: 128 QFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDGG 170
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 67/148 (45%), Gaps = 13/148 (8%)
Query: 25 FEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMV 84
F + K ++ + + + + AF E R ++ N IV+L+ A + L V
Sbjct: 21 FGVVCKAKWRAKDVAIKQIESESERKAFIVELRQ-LSRVNHPNIVKLYGACLNPVCL--V 77
Query: 85 MDYMPGGDLVNLMSNYD-VP-------EKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNM 136
M+Y GG L N++ + +P W C++ V L ++ +HRD+KP N+
Sbjct: 78 MEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC-LQCSQGVAYLHSMQPKALIHRDLKPPNL 136
Query: 137 LLDKHGH-LKLADFGTCMRMNKTGTETK 163
LL G LK+ DFGT + T K
Sbjct: 137 LLVAGGTVLKICDFGTACDIQTHMTNNK 164
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 56/114 (49%), Gaps = 6/114 (5%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGG-----DLVNLMSNYDVPEKWAKFYCAE 113
+M ++ +IVQ + A ++ M+ M V + + +PE+
Sbjct: 74 VMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDDVIPEEILGKITLA 133
Query: 114 VVLALDAI-HCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLG 166
V AL+ + L +HRD+KP N+LLD+ G++KL DFG ++ + +T+ G
Sbjct: 134 TVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAG 187
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP+N+L++ G +KLADFG
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFG 150
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 111 QLLQGLSFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 148
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP+N+L++ G +KLADFG
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFG 149
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 47.8 bits (112), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 48/101 (47%), Gaps = 6/101 (5%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYM-PGGDLVNLMSNYDVPEKWAKFYCAEVVLA 117
++ + +IVQ F +++ M+ M + + +PE+ +V A
Sbjct: 77 VLKSHDCPYIVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQGPIPERILGKMTVAIVKA 136
Query: 118 L---DAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
L H G +HRDVKP N+LLD+ G +KL DFG R+
Sbjct: 137 LYYLKEKH--GVIHRDVKPSNILLDERGQIKLCDFGISGRL 175
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 35 LYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV 94
+ L Y + +R D F E IM + I++L +K + +V +YM G L
Sbjct: 78 IKTLKVGYTEKQRRD---FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 95 NLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKLA 147
+ + +D A+F ++V L I +GFVHRD+ N+L++ + K++
Sbjct: 135 SFLRKHD-----AQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVS 189
Query: 148 DFG 150
DFG
Sbjct: 190 DFG 192
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 47.8 bits (112), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V M G DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 114 TIEQMKDVYLVTHLM-GADLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 172
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 173 SNLLLNTTXDLKICDFG 189
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 155
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 59 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 117
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 155
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLF 113
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 151
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 47.4 bits (111), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 148
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 147
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E +I+ I+ LH F++ + ++++ + GG+L + ++ + + E A + ++
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 124
Query: 115 VLALDAIHCLGFVHRDVKPDN-MLLDK---HGHLKLADFGTCMRMNKTGTETKRL 165
+ + +H H D+KP+N MLLDK + +KL DFG ++ + G E K +
Sbjct: 125 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-EAGNEFKNI 178
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 150
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 9/79 (11%)
Query: 78 AKSLYMVMDYMPGGD---LVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPD 134
+K+ +V +Y+ D L +++++D+ +FY E++ ALD H G +HRDVKP
Sbjct: 107 SKTPALVFEYINNTDFKQLYQILTDFDI-----RFYMYELLKALDYCHSKGIMHRDVKPH 161
Query: 135 NMLLD-KHGHLKLADFGTC 152
N+++D + L+L D+G
Sbjct: 162 NVMIDHQQKKLRLIDWGLA 180
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 148
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 148
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 147
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 152
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 151
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 54 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 112
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 150
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 56 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 114
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 152
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 148
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 54/99 (54%), Gaps = 7/99 (7%)
Query: 60 MAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM--SNYDVPEKWAKFYCAEVVLA 117
+ HAN ++QL+ AF+ + +VM+Y+ GG+L + + +Y++ E + ++
Sbjct: 143 LDHAN---LIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEG 199
Query: 118 LDAIHCLGFVHRDVKPDNMLLDKH--GHLKLADFGTCMR 154
+ +H + +H D+KP+N+L +K+ DFG R
Sbjct: 200 IRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARR 238
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 149
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 147
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E +I+ I+ LH F++ + ++++ + GG+L + ++ + + E A + ++
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 117
Query: 115 VLALDAIHCLGFVHRDVKPDN-MLLDK---HGHLKLADFGTCMRMNKTGTETKRL 165
+ + +H H D+KP+N MLLDK + +KL DFG ++ + G E K +
Sbjct: 118 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-EAGNEFKNI 171
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 151
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 149
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 148
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 147
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 148
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 49/93 (52%), Gaps = 6/93 (6%)
Query: 60 MAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM--SNYDVPEKWAKFYCAEVVLA 117
+ H N IV+LH K L +V ++ DL N D+ + K + +++
Sbjct: 58 LKHKN---IVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLFQLLKG 113
Query: 118 LDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
L H +HRD+KP N+L++++G LKLA+FG
Sbjct: 114 LGFCHSRNVLHRDLKPQNLLINRNGELKLANFG 146
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 148
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 46 KRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPE 104
+++D E ++ + I++L+ F+D Y+V + GG+L + ++S E
Sbjct: 72 QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 131
Query: 105 KWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD---KHGHLKLADFGTCMRMNKTGTE 161
A +V+ + +H VHRD+KP+N+LL+ K ++++ DFG +
Sbjct: 132 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 191
Query: 162 TKRLG 166
++G
Sbjct: 192 KDKIG 196
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 47/79 (59%), Gaps = 9/79 (11%)
Query: 78 AKSLYMVMDYMPGGD---LVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPD 134
+K+ +V +Y+ D L +++++D+ +FY E++ ALD H G +HRDVKP
Sbjct: 112 SKTPALVFEYINNTDFKQLYQILTDFDI-----RFYMYELLKALDYCHSKGIMHRDVKPH 166
Query: 135 NMLLD-KHGHLKLADFGTC 152
N+++D + L+L D+G
Sbjct: 167 NVMIDHQQKKLRLIDWGLA 185
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 61/115 (53%), Gaps = 6/115 (5%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E +I+ I+ LH F++ + ++++ + GG+L + ++ + + E A + ++
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 138
Query: 115 VLALDAIHCLGFVHRDVKPDN-MLLDK---HGHLKLADFGTCMRMNKTGTETKRL 165
+ + +H H D+KP+N MLLDK + +KL DFG ++ + G E K +
Sbjct: 139 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKI-EAGNEFKNI 192
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 52 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 110
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 148
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 109
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 147
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 53 EISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLF 111
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 149
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 47.0 bits (110), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Query: 34 TLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL 93
+ AL + Y + +R D F E IM + I++L + +V +YM G L
Sbjct: 81 AIKALKAGYTERQRRD---FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKL 146
+ +D +F ++V L + LG+VHRD+ N+L+D + K+
Sbjct: 138 DTFLRTHD-----GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKV 192
Query: 147 ADFG 150
+DFG
Sbjct: 193 SDFG 196
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 56/124 (45%), Gaps = 15/124 (12%)
Query: 34 TLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL 93
+ AL + Y + +R D F E IM + I++L + +V +YM G L
Sbjct: 81 AIKALKAGYTERQRRD---FLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL 137
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKL 146
+ +D +F ++V L + LG+VHRD+ N+L+D + K+
Sbjct: 138 DTFLRTHD-----GQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKV 192
Query: 147 ADFG 150
+DFG
Sbjct: 193 SDFG 196
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 58 DIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLA 117
++ H N ++ + A D + +Y+V DYM DL ++ + ++ +++
Sbjct: 64 ELSGHENIVNLLNVLRADND-RDVYLVFDYMET-DLHAVIRANILEPVHKQYVVYQLIKV 121
Query: 118 LDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGRN 168
+ +H G +HRD+KP N+LL+ H+K+ADFG ++++ +R+ N
Sbjct: 122 IKYLHSGGLLHRDMKPSNILLNAECHVKVADFG----LSRSFVNIRRVTNN 168
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 96 TIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 154
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 155 SNLLLNTTSDLKICDFG 171
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 8/102 (7%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPE-------KWAK 108
E +M E IV+L+ L +V ++M DL M + V K
Sbjct: 53 EISLMKELKHENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELNLVK 111
Query: 109 FYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ +++ L H +HRD+KP N+L++K G LKL DFG
Sbjct: 112 YFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFG 153
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 56 ERDIMAHANSEWIV-----QLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY 110
E I+ H E I+ Q +F++ +Y++ + M DL ++S + + +++
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQYF 117
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+ + A+ +H +HRD+KP N+L++ + LK+ DFG ++++ +
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 56 ERDIMAHANSEWIV-----QLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY 110
E I+ H E I+ Q +F++ +Y++ + M DL ++S + + +++
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQYF 117
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+ + A+ +H +HRD+KP N+L++ + LK+ DFG ++++ +
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 82 YMVMDYMPGGDLVNLM-SNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
Y+VM+Y+ G L +++ + + K A A+ AL+ H G +HRDVKP N+L+
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISA 151
Query: 141 HGHLKLADFGTCMRMNKTG 159
+K+ DFG + +G
Sbjct: 152 TNAVKVVDFGIARAIADSG 170
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 58/111 (52%), Gaps = 6/111 (5%)
Query: 56 ERDIMAHANSEWIV-----QLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY 110
E I+ H E I+ Q +F++ +Y++ + M DL ++S + + +++
Sbjct: 59 EIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQELM-QTDLHRVISTQMLSDDHIQYF 117
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+ + A+ +H +HRD+KP N+L++ + LK+ DFG ++++ +
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 94 TIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 152
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 153 SNLLLNTTXDLKICDFG 169
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 94 TIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 152
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 153 SNLLLNTTXDLKICDFG 169
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 53 FWEERDIMAHANSEWIVQLHFAF--QDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E I+ +S++IV+ +SL +VM+Y+P G L + + + ++
Sbjct: 58 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL 117
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
Y +++ ++ + VHRD+ N+L++ H+K+ADFG
Sbjct: 118 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFG 159
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 98 TIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 156
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 157 SNLLLNTTXDLKICDFG 173
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 94 TIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 152
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 153 SNLLLNTTCDLKICDFG 169
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 35 LYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV 94
+ L Y + +R D F E IM + I++L +K + +V +YM G L
Sbjct: 78 IKTLKVGYTEKQRRD---FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 95 NLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKLA 147
+ + +D A+F ++V L I +G+VHRD+ N+L++ + K++
Sbjct: 135 SFLRKHD-----AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVS 189
Query: 148 DFG 150
DFG
Sbjct: 190 DFG 192
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 98 TIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 156
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 157 SNLLLNTTXDLKICDFG 173
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 51 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLF 109
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 147
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 4/98 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKFYCA 112
E ++ N IV+L LY+V +++ DL M + +P K Y
Sbjct: 55 EISLLKELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLF 113
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+++ L H +HRD+KP N+L++ G +KLADFG
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFG 151
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 53 FWEERDIMAHANSEWIVQLHFAF--QDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E I+ +S++IV+ +SL +VM+Y+P G L + + + ++
Sbjct: 59 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL 118
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
Y +++ ++ + VHRD+ N+L++ H+K+ADFG
Sbjct: 119 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFG 160
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 51/94 (54%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFV 127
I++ + + KS+Y+V+D M + S+ + + +++ +++ L +H +
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVI 180
Query: 128 HRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
HRD+KP N+L++++ LK+ DFG + + E
Sbjct: 181 HRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE 214
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 96 TIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 154
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 155 SNLLLNTTCDLKICDFG 171
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 35 LYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV 94
+ L Y + +R D F E IM + I++L +K + +V +YM G L
Sbjct: 78 IKTLKVGYTEKQRRD---FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 95 NLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKLA 147
+ + +D A+F ++V L I +G+VHRD+ N+L++ + K++
Sbjct: 135 SFLRKHD-----AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVS 189
Query: 148 DFG 150
DFG
Sbjct: 190 DFG 192
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 35 LYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV 94
+ L Y + +R D F E IM + I++L +K + +V +YM G L
Sbjct: 78 IKTLKVGYTEKQRRD---FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 95 NLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKLA 147
+ + +D A+F ++V L I +G+VHRD+ N+L++ + K++
Sbjct: 135 SFLRKHD-----AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVS 189
Query: 148 DFG 150
DFG
Sbjct: 190 DFG 192
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 98 TIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 156
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 157 SNLLLNTTCDLKICDFG 173
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLM-SNYDVPEKWAKFYCAEVVLALDAIHCLGF 126
I++ + + KS+Y+V+D M DL ++ S+ + + +++ +++ L +H
Sbjct: 122 ILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQV 180
Query: 127 VHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+HRD+KP N+L++++ LK+ DFG + + E
Sbjct: 181 IHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAE 215
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 94 TIEQMKDVYIVQDLM-ETDLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 152
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 153 SNLLLNTTXDLKIXDFG 169
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 92 TIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 150
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 151 SNLLLNTTCDLKICDFG 167
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 82 YMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
Y+VM+Y+ G L + ++ + A + +++ + H + VHRD+KP N+L+D
Sbjct: 87 YLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDS 146
Query: 141 HGHLKLADFGTCMRMNKTG 159
+ LK+ DFG +++T
Sbjct: 147 NKTLKIFDFGIAKALSETS 165
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 35 LYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV 94
+ L Y + +R D F E IM + I++L +K + +V +YM G L
Sbjct: 78 IKTLKVGYTEKQRRD---FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 95 NLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKLA 147
+ + +D A+F ++V L I +G+VHRD+ N+L++ + K++
Sbjct: 135 SFLRKHD-----AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVS 189
Query: 148 DFG 150
DFG
Sbjct: 190 DFG 192
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 35 LYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV 94
+ L Y + +R D F E IM + I++L +K + +V +YM G L
Sbjct: 78 IKTLKVGYTEKQRRD---FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 95 NLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKLA 147
+ + +D A+F ++V L I +G+VHRD+ N+L++ + K++
Sbjct: 135 SFLRKHD-----AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVS 189
Query: 148 DFG 150
DFG
Sbjct: 190 DFG 192
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 35 LYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV 94
+ L Y + +R D F E IM + I++L +K + +V +YM G L
Sbjct: 78 IKTLKVGYTEKQRRD---FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 134
Query: 95 NLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKLA 147
+ + +D A+F ++V L I +G+VHRD+ N+L++ + K++
Sbjct: 135 SFLRKHD-----AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVS 189
Query: 148 DFG 150
DFG
Sbjct: 190 DFG 192
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E I+ ++ LH +++ + ++++ + GG+L + ++ + + E+ A + ++
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 115 VLALDAIHCLGFVHRDVKPDN-MLLDKH---GHLKLADFGTCMRMN 156
+ + +H L H D+KP+N MLLD++ +K+ DFG +++
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 99 TIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 157
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 158 SNLLLNTTCDLKICDFG 174
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 100 TIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 158
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 159 SNLLLNTTCDLKICDFG 175
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 91 TIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 149
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 150 SNLLLNTTCDLKICDFG 166
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 98 TIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 156
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 157 SNLLLNTTCDLKICDFG 173
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 92 TIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 150
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 151 SNLLLNTTCDLKICDFG 167
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 35 LYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV 94
+ L Y + +R D F E IM + I++L +K + +V +YM G L
Sbjct: 66 IKTLKVGYTEKQRRD---FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 122
Query: 95 NLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKLA 147
+ + +D A+F ++V L I +G+VHRD+ N+L++ + K++
Sbjct: 123 SFLRKHD-----AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVS 177
Query: 148 DFG 150
DFG
Sbjct: 178 DFG 180
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E I+ ++ LH +++ + ++++ + GG+L + ++ + + E+ A + ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 115 VLALDAIHCLGFVHRDVKPDN-MLLDKH---GHLKLADFGTCMRMN 156
+ + +H L H D+KP+N MLLD++ +K+ DFG +++
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 98 TIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 156
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 157 SNLLLNTTCDLKICDFG 173
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 53 FWEERDIMAHANSEWIVQLHFAF--QDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E I+ +S++IV+ +SL +VM+Y+P G L + + + ++
Sbjct: 71 FQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL 130
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
Y +++ ++ + VHRD+ N+L++ H+K+ADFG
Sbjct: 131 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFG 172
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 35 LYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV 94
+ L Y + +R D F E IM + I++L +K + +V +YM G L
Sbjct: 76 IKTLKVGYTEKQRRD---FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 132
Query: 95 NLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKLA 147
+ + +D A+F ++V L I +G+VHRD+ N+L++ + K++
Sbjct: 133 SFLRKHD-----AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVS 187
Query: 148 DFG 150
DFG
Sbjct: 188 DFG 190
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGF 126
I+ L + D K +Y+V + GG+L++ ++ E+ A + ++ +H G
Sbjct: 78 IITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGV 137
Query: 127 VHRDVKPDNML-LDKHGH---LKLADFG 150
VHRD+KP N+L +D+ G+ +++ DFG
Sbjct: 138 VHRDLKPSNILYVDESGNPESIRICDFG 165
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 99 TIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 157
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 158 SNLLLNTTCDLKICDFG 174
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E I+ ++ LH +++ + ++++ + GG+L + ++ + + E+ A + ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 115 VLALDAIHCLGFVHRDVKPDN-MLLDKH---GHLKLADFGTCMRMN 156
+ + +H L H D+KP+N MLLD++ +K+ DFG +++
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 96 TIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 154
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 155 SNLLLNTTCDLKICDFG 171
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E I+ ++ LH +++ + ++++ + GG+L + ++ + + E+ A + ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 115 VLALDAIHCLGFVHRDVKPDN-MLLDKH---GHLKLADFGTCMRMN 156
+ + +H L H D+KP+N MLLD++ +K+ DFG +++
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E I+ ++ LH +++ + ++++ + GG+L + ++ + + E+ A + ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 115 VLALDAIHCLGFVHRDVKPDN-MLLDKH---GHLKLADFGTCMRMN 156
+ + +H L H D+KP+N MLLD++ +K+ DFG +++
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E I+ ++ LH +++ + ++++ + GG+L + ++ + + E+ A + ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 115 VLALDAIHCLGFVHRDVKPDN-MLLDKH---GHLKLADFGTCMRMN 156
+ + +H L H D+KP+N MLLD++ +K+ DFG +++
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 58/123 (47%), Gaps = 15/123 (12%)
Query: 35 LYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV 94
+ L Y + +R D F E IM + I++L +K + +V +YM G L
Sbjct: 49 IKTLKVGYTEKQRRD---FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLD 105
Query: 95 NLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKLA 147
+ + +D A+F ++V L I +G+VHRD+ N+L++ + K++
Sbjct: 106 SFLRKHD-----AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVS 160
Query: 148 DFG 150
DFG
Sbjct: 161 DFG 163
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 114 TIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 172
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 173 SNLLLNTTCDLKICDFG 189
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 102 TIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 160
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 161 SNLLLNTTCDLKICDFG 177
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 94 TIEQMKDVYIVQDLMET-DLYKLLKTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 152
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 153 SNLLLNTTCDLKICDFG 169
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E I+ ++ LH +++ + ++++ + GG+L + ++ + + E+ A + ++
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 115 VLALDAIHCLGFVHRDVKPDN-MLLDKH---GHLKLADFGTCMRMN 156
+ + +H L H D+KP+N MLLD++ +K+ DFG +++
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 168
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E I+ ++ LH +++ + ++++ + GG+L + ++ + + E+ A + ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 115 VLALDAIHCLGFVHRDVKPDN-MLLDKH---GHLKLADFGTCMRMN 156
+ + +H L H D+KP+N MLLD++ +K+ DFG +++
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E I+ ++ LH +++ + ++++ + GG+L + ++ + + E+ A + ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 115 VLALDAIHCLGFVHRDVKPDN-MLLDKH---GHLKLADFGTCMRMN 156
+ + +H L H D+KP+N MLLD++ +K+ DFG +++
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 61/125 (48%), Gaps = 4/125 (3%)
Query: 46 KRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPE 104
+++D E ++ + I++L+ F+D Y+V + GG+L + ++S E
Sbjct: 66 QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 125
Query: 105 KWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD---KHGHLKLADFGTCMRMNKTGTE 161
A +V+ + +H VHRD+KP+N+LL+ K ++++ DFG +
Sbjct: 126 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKM 185
Query: 162 TKRLG 166
++G
Sbjct: 186 KDKIG 190
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 46 KRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPE 104
+++D E ++ + I++L+ F+D Y+V + GG+L + ++S E
Sbjct: 89 QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 148
Query: 105 KWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD---KHGHLKLADFG 150
A +V+ + +H VHRD+KP+N+LL+ K ++++ DFG
Sbjct: 149 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG 197
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLV-NLMSNYDV----PEKWAKFYCAEVVLALDAIH 122
IV+L + LYMV ++M G DL ++ D E A Y +++ AL H
Sbjct: 90 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 149
Query: 123 CLGFVHRDVKPDNMLL---DKHGHLKLADFGTCMRMNKTG 159
+HRDVKP +LL + +KL FG +++ ++G
Sbjct: 150 DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG 189
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E I+ ++ LH +++ + ++++ + GG+L + ++ + + E+ A + ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 115 VLALDAIHCLGFVHRDVKPDN-MLLDKH---GHLKLADFGTCMRMN 156
+ + +H L H D+KP+N MLLD++ +K+ DFG +++
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLV-NLMSNYDV----PEKWAKFYCAEVVLALDAIH 122
IV+L + LYMV ++M G DL ++ D E A Y +++ AL H
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCH 147
Query: 123 CLGFVHRDVKPDNMLL---DKHGHLKLADFGTCMRMNKTG 159
+HRDVKP +LL + +KL FG +++ ++G
Sbjct: 148 DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG 187
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F KSL Y+VM+ M
Sbjct: 58 SRPFQ-NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-- 114
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTC 152
++ + ++ + + ++++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 57/109 (52%), Gaps = 4/109 (3%)
Query: 46 KRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPE 104
+++D E ++ + I++L+ F+D Y+V + GG+L + ++S E
Sbjct: 90 QKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 149
Query: 105 KWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD---KHGHLKLADFG 150
A +V+ + +H VHRD+KP+N+LL+ K ++++ DFG
Sbjct: 150 VDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFG 198
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 4/125 (3%)
Query: 46 KRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPE 104
+++D E ++ + I +L+ F+D Y+V + GG+L + ++S E
Sbjct: 66 QKTDKESLLREVQLLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSE 125
Query: 105 KWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD---KHGHLKLADFGTCMRMNKTGTE 161
A +V+ + H VHRD+KP+N+LL+ K ++++ DFG +
Sbjct: 126 VDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKX 185
Query: 162 TKRLG 166
++G
Sbjct: 186 KDKIG 190
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F KSL Y+VM+ M
Sbjct: 58 SRPFQ-NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-- 114
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTC 152
++ + ++ + + ++++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ + S+Y+V +YM DL N++ + E+ A+ + +++ L IH +HRD+KP
Sbjct: 90 SLTELNSVYIVQEYMET-DLANVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKP 148
Query: 134 DNMLLDKHGH-LKLADFGTCMRMN 156
N+ ++ LK+ DFG M+
Sbjct: 149 ANLFINTEDLVLKIGDFGLARIMD 172
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E I+ ++ LH +++ + ++++ + GG+L + ++ + + E+ A + ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 115 VLALDAIHCLGFVHRDVKPDN-MLLDKH---GHLKLADFGTCMRMN 156
+ + +H L H D+KP+N MLLD++ +K+ DFG +++
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E I+ ++ LH +++ + ++++ + GG+L + ++ + + E+ A + ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 115 VLALDAIHCLGFVHRDVKPDN-MLLDKH---GHLKLADFGTCMRMN 156
+ + +H L H D+KP+N MLLD++ +K+ DFG +++
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 58/106 (54%), Gaps = 5/106 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E I+ ++ LH +++ + ++++ + GG+L + ++ + + E+ A + ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 115 VLALDAIHCLGFVHRDVKPDN-MLLDKH---GHLKLADFGTCMRMN 156
+ + +H L H D+KP+N MLLD++ +K+ DFG +++
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F KSL Y+VM+ M
Sbjct: 58 SRPFQ-NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-- 114
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTC 152
++ + ++ + + ++++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLA 173
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 56 ERDIMAHANSEW--IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCA 112
+R+I+ H + IV+ L +VM+Y GG+L + N E A+F+
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKH--GHLKLADFG 150
+++ + H + HRD+K +N LLD LK+ADFG
Sbjct: 123 QLISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFG 162
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 76 QDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
++A+S ++VM+ +PG L ++++ + ++ + ++ +L A+ GF H DV+P N
Sbjct: 312 ENAQSGWLVMEKLPGRLLSDMLAAGEEIDR--EKILGSLLRSLAALEKQGFWHDDVRPWN 369
Query: 136 MLLDKHGHLKLADFGTCM 153
+++D H +L DFG+ +
Sbjct: 370 VMVDARQHARLIDFGSIV 387
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ K +Y+V D M DL L+ + ++ +++ L IH +HRD+KP
Sbjct: 98 TIEQMKDVYIVQDLMET-DLYKLLKCQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 156
Query: 134 DNMLLDKHGHLKLADFG 150
N+LL+ LK+ DFG
Sbjct: 157 SNLLLNTTCDLKICDFG 173
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 82 YMVMDYMPGGDLVNLM-SNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
Y+VM+Y+ G L +++ + + K A A+ AL+ H G +HRDVKP N+++
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 141 HGHLKLADFGTCMRMNKTGTETKR 164
+K+ DFG + +G +
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQ 175
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 82 YMVMDYMPGGDLVNLM-SNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
Y+VM+Y+ G L +++ + + K A A+ AL+ H G +HRDVKP N+++
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 141 HGHLKLADFGTCMRMNKTGTETKR 164
+K+ DFG + +G +
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQ 175
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 76 QDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
++A+S ++VM+ +PG L ++++ + ++ + ++ +L A+ GF H DV+P N
Sbjct: 312 ENAQSGWLVMEKLPGRLLSDMLAAGEEIDR--EKILGSLLRSLAALEKQGFWHDDVRPWN 369
Query: 136 MLLDKHGHLKLADFGTCM 153
+++D H +L DFG+ +
Sbjct: 370 VMVDARQHARLIDFGSIV 387
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF--- 109
F +E +M E +VQL +A + +Y+V +YM G L++ + K+ +
Sbjct: 309 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQL 365
Query: 110 --YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
A++ + + + +VHRD++ N+L+ ++ K+ADFG
Sbjct: 366 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 408
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 82 YMVMDYMPGGDLVNLM-SNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
Y+VM+Y+ G L +++ + + K A A+ AL+ H G +HRDVKP N+++
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 141 HGHLKLADFGTCMRMNKTGTETKR 164
+K+ DFG + +G +
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQ 175
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF--- 109
F +E +M E +VQL +A + +Y+V +YM G L++ + K+ +
Sbjct: 226 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQL 282
Query: 110 --YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
A++ + + + +VHRD++ N+L+ ++ K+ADFG
Sbjct: 283 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 325
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 82 YMVMDYMPGGDLVNLM-SNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
Y+VM+Y+ G L +++ + + K A A+ AL+ H G +HRDVKP N+++
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 141 HGHLKLADFGTCMRMNKTGTETKR 164
+K+ DFG + +G +
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQ 175
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 28 LLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHAN-----SEWIVQLHFAFQDAKSLY 82
+L + +YA+ +Y ++ +D+ R+ +A+ N S+ I++L+ + +Y
Sbjct: 47 VLNEKKQIYAI--KYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104
Query: 83 MVMDYMPGGDLVNLMSNYDVPEKWA-KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKH 141
MVM+ DL + + + W K Y ++ A+ IH G VH D+KP N L+
Sbjct: 105 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VD 162
Query: 142 GHLKLADFGTCMRMNKTGTETKRLGRNG 169
G LKL DFG +M T + + G
Sbjct: 163 GMLKLIDFGIANQMQPDTTSVVKDSQVG 190
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 23 RLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHAN-----SEWIVQLHFAFQD 77
++F+ +L + +YA+ +Y ++ +D+ R+ +A+ N S+ I++L+
Sbjct: 71 KVFQ-VLNEKKQIYAI--KYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT 127
Query: 78 AKSLYMVMDYMPGGDLVNLMSNYDVPEKWA-KFYCAEVVLALDAIHCLGFVHRDVKPDNM 136
+ +YMVM+ DL + + + W K Y ++ A+ IH G VH D+KP N
Sbjct: 128 DQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 186
Query: 137 LLDKHGHLKLADFGTCMRMNKTGTETKRLGRNG 169
L+ G LKL DFG +M T + + G
Sbjct: 187 LI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVG 218
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDYM-PGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ M P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 75 VIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 168
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 74 AFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKP 133
+ + +Y+V D M DL L+ + + ++ +++ L IH +HRD+KP
Sbjct: 114 TLEAMRDVYIVQDLMET-DLYKLLKSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKP 172
Query: 134 DNMLLDKHGHLKLADFG 150
N+L++ LK+ DFG
Sbjct: 173 SNLLINTTCDLKICDFG 189
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF--- 109
F +E +M E +VQL +A + +Y+V +YM G L++ + K+ +
Sbjct: 226 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQL 282
Query: 110 --YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
A++ + + + +VHRD++ N+L+ ++ K+ADFG
Sbjct: 283 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 325
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEV 114
E +++ + I+++ F+D ++Y+VM+ GG+L+ ++S + ++ Y AE+
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL 129
Query: 115 VL----ALDAIHCLGFVHRDVKPDNMLL---DKHGHLKLADFG 150
+ AL H VH+D+KP+N+L H +K+ DFG
Sbjct: 130 MKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFG 172
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 82 YMVMDYMPGGDLVNLM-SNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
Y+VM+Y+ G L +++ + + K A A+ AL+ H G +HRDVKP N+++
Sbjct: 109 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 168
Query: 141 HGHLKLADFGTCMRMNKTGTETKR 164
+K+ DFG + +G +
Sbjct: 169 TNAVKVMDFGIARAIADSGNSVTQ 192
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 23 RLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHAN-----SEWIVQLHFAFQD 77
++F+ +L + +YA+ +Y ++ +D+ R+ +A+ N S+ I++L+
Sbjct: 27 KVFQ-VLNEKKQIYAI--KYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT 83
Query: 78 AKSLYMVMDYMPGGDLVNLMSNYDVPEKWA-KFYCAEVVLALDAIHCLGFVHRDVKPDNM 136
+ +YMVM+ DL + + + W K Y ++ A+ IH G VH D+KP N
Sbjct: 84 DQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 142
Query: 137 LLDKHGHLKLADFGTCMRMNKTGTETKRLGRNG 169
L+ G LKL DFG +M T + + G
Sbjct: 143 LI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVG 174
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 57/119 (47%), Gaps = 9/119 (7%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF--- 109
F EE IM + +VQL +A + +Y+V +YM G L++ + D + K
Sbjct: 51 FLEEAQIMKKLKHDKLVQL-YAVVSEEPIYIVTEYMNKGSLLDFLK--DGEGRALKLPNL 107
Query: 110 --YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLG 166
A+V + I + ++HRD++ N+L+ K+ADFG R+ + T R G
Sbjct: 108 VDMAAQVAAGMAYIERMNYIHRDLRSANILVGNGLICKIADFGLA-RLIEDNEXTARQG 165
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 5/111 (4%)
Query: 45 IKRSDSAFFWEERDIMAHANSEW--IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD- 101
I+R + +R+I+ H + IV+ L +VM+Y GG+L + N
Sbjct: 52 IERGEKIAANVKREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGR 111
Query: 102 VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKH--GHLKLADFG 150
E A+F+ +++ + H + HRD+K +N LLD LK+ DFG
Sbjct: 112 FSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFG 162
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 28 LLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHAN-----SEWIVQLHFAFQDAKSLY 82
+L + +YA+ +Y ++ +D+ R+ +A+ N S+ I++L+ + +Y
Sbjct: 28 VLNEKKQIYAI--KYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 85
Query: 83 MVMDYMPGGDLVNLMSNYDVPEKWA-KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKH 141
MVM+ DL + + + W K Y ++ A+ IH G VH D+KP N L+
Sbjct: 86 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VD 143
Query: 142 GHLKLADFGTCMRMNKTGTETKRLGRNG 169
G LKL DFG +M T + + G
Sbjct: 144 GMLKLIDFGIANQMQPDTTSVVKDSQVG 171
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 9/119 (7%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSN-----YDVPEKWA 107
F +E +M E +VQL +A + +Y+V++YM G L++ + +P+
Sbjct: 60 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQ--L 116
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLG 166
A++ + + + +VHRD++ N+L+ ++ K+ADFG R+ + T R G
Sbjct: 117 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEXTARQG 174
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F KSL Y+VM+ M
Sbjct: 58 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-- 114
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ + ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG 171
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F KSL Y+VM+ M
Sbjct: 58 SRPFQ-NQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-- 114
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ + ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDATLKILDFG 171
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 48/78 (61%), Gaps = 2/78 (2%)
Query: 76 QDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
++A+S ++VM+ +PG L ++++ + ++ + ++ +L A+ GF H DV+P N
Sbjct: 312 ENAQSGWLVMEKLPGRLLSDMLAAGEEIDR--EKILGSLLRSLAALEKKGFWHDDVRPWN 369
Query: 136 MLLDKHGHLKLADFGTCM 153
+++D H +L DFG+ +
Sbjct: 370 VMVDARQHARLIDFGSIV 387
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 23 RLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHAN-----SEWIVQLHFAFQD 77
++F+ +L + +YA+ +Y ++ +D+ R+ +A+ N S+ I++L+
Sbjct: 71 KVFQ-VLNEKKQIYAI--KYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT 127
Query: 78 AKSLYMVMDYMPGGDLVNLMSNYDVPEKWA-KFYCAEVVLALDAIHCLGFVHRDVKPDNM 136
+ +YMVM+ DL + + + W K Y ++ A+ IH G VH D+KP N
Sbjct: 128 DQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 186
Query: 137 LLDKHGHLKLADFGTCMRMNKTGTETKRLGRNG 169
L+ G LKL DFG +M T + + G
Sbjct: 187 LI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVG 218
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKW 106
+ A W+ + A +++L F+ + +V++ +P DL + ++ + E
Sbjct: 84 EVALLWK---VGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGP 140
Query: 107 AKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD-KHGHLKLADFGT 151
++ + +VV A+ H G VHRD+K +N+L+D + G KL DFG+
Sbjct: 141 SRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGS 186
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 44.7 bits (104), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 60 MAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKW-----AKFYCAEV 114
+ H+N IV+L+ K L +V +++ DL L+ DV E AK + ++
Sbjct: 57 LKHSN---IVKLYDVIHTKKRLVLVFEHL-DQDLKKLL---DVCEGGLESVTAKSFLLQL 109
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ + H +HRD+KP N+L+++ G LK+ADFG
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFG 145
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 60 MAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKW-----AKFYCAEV 114
+ H+N IV+L+ K L +V +++ DL L+ DV E AK + ++
Sbjct: 57 LKHSN---IVKLYDVIHTKKRLVLVFEHL-DQDLKKLL---DVCEGGLESVTAKSFLLQL 109
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ + H +HRD+KP N+L+++ G LK+ADFG
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFG 145
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 11/153 (7%)
Query: 23 RLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHAN-----SEWIVQLHFAFQD 77
++F+ +L + +YA+ +Y ++ +D+ R+ +A+ N S+ I++L+
Sbjct: 71 KVFQ-VLNEKKQIYAI--KYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEIT 127
Query: 78 AKSLYMVMDYMPGGDLVNLMSNYDVPEKWA-KFYCAEVVLALDAIHCLGFVHRDVKPDNM 136
+ +YMVM+ DL + + + W K Y ++ A+ IH G VH D+KP N
Sbjct: 128 DQYIYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANF 186
Query: 137 LLDKHGHLKLADFGTCMRMNKTGTETKRLGRNG 169
L+ G LKL DFG +M T + + G
Sbjct: 187 LI-VDGMLKLIDFGIANQMQPDTTSVVKDSQVG 218
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 54/106 (50%), Gaps = 14/106 (13%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY-- 110
F +E +M E +VQL +A + +Y+VM+YM G L++ + + K+
Sbjct: 60 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVMEYMSKGCLLDFLKG-----EMGKYLRL 113
Query: 111 ------CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
A++ + + + +VHRD++ N+L+ ++ K+ADFG
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 159
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 102 VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
VP + K +++ LD +H VHRD+KP N+L+ G +KLADFG
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG 165
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 28 LLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHAN-----SEWIVQLHFAFQDAKSLY 82
+L + +YA+ +Y ++ +D+ R+ +A+ N S+ I++L+ + +Y
Sbjct: 27 VLNEKKQIYAI--KYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 84
Query: 83 MVMDYMPGGDLVNLMSNYDVPEKWA-KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKH 141
MVM+ DL + + + W K Y ++ A+ IH G VH D+KP N L+
Sbjct: 85 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VD 142
Query: 142 GHLKLADFGTCMRMNKTGTETKRLGRNG 169
G LKL DFG +M T + + G
Sbjct: 143 GMLKLIDFGIANQMQPDTTSVVKDSQVG 170
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 102 VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
VP + K +++ LD +H VHRD+KP N+L+ G +KLADFG
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG 165
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 60 MAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKW-----AKFYCAEV 114
+ H+N IV+L+ K L +V +++ DL L+ DV E AK + ++
Sbjct: 57 LKHSN---IVKLYDVIHTKKRLVLVFEHL-DQDLKKLL---DVCEGGLESVTAKSFLLQL 109
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ + H +HRD+KP N+L+++ G LK+ADFG
Sbjct: 110 LNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFG 145
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF--- 109
F +E +M E +VQL +A + +Y+V +YM G L++ + K+ +
Sbjct: 53 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKGET--GKYLRLPQL 109
Query: 110 --YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
A++ + + + +VHRD++ N+L+ ++ K+ADFG
Sbjct: 110 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 152
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 102 VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
VP + K +++ LD +H VHRD+KP N+L+ G +KLADFG
Sbjct: 117 VPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFG 165
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 102 VPEKWAKFYCAEVVLALDAIHC-LGFVHRDVKPDNMLLDKHGHLKLADFG 150
+PE +V AL+ +H L +HRDVKP N+L++ G +K+ DFG
Sbjct: 150 IPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG 199
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 79/185 (42%), Gaps = 15/185 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y+V +YMP G+L++ + + E A +
Sbjct: 75 FLKEAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLY 134
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 135 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHVVKVADFGLS-RLMTGDTYTAHAGAKF 193
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + +D +EK E P
Sbjct: 194 PIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEKGYRMEQP 253
Query: 219 EENFP 223
E P
Sbjct: 254 EGCPP 258
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 44.7 bits (104), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 57/106 (53%), Gaps = 5/106 (4%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E I+ ++ LH +++ + ++ + + GG+L + ++ + + E+ A + ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 115 VLALDAIHCLGFVHRDVKPDN-MLLDKH---GHLKLADFGTCMRMN 156
+ + +H L H D+KP+N MLLD++ +K+ DFG +++
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF--- 109
F +E +M E +VQL +A + +Y+V +YM G L++ + K+ +
Sbjct: 226 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVGEYMSKGSLLDFLKGET--GKYLRLPQL 282
Query: 110 --YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
A++ + + + +VHRD++ N+L+ ++ K+ADFG
Sbjct: 283 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 325
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 54/106 (50%), Gaps = 14/106 (13%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY-- 110
F +E +M E +VQL +A + +Y+V++YM G L++ + + K+
Sbjct: 60 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVIEYMSKGSLLDFLKG-----EMGKYLRL 113
Query: 111 ------CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
A++ + + + +VHRD++ N+L+ ++ K+ADFG
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 159
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 76 QDAKSLYMVMDYMPGGDLVNL---MSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVK 132
Q +K+ ++ +Y+ D L +++YD+ ++Y E++ ALD H G +HRDVK
Sbjct: 98 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDI-----RYYIYELLKALDYCHSQGIMHRDVK 152
Query: 133 PDNMLLDKH-GHLKLADFGTC 152
P N+++D L+L D+G
Sbjct: 153 PHNVMIDHELRKLRLIDWGLA 173
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 53 FWEERDIMAHANSEWIVQLH-FAFQDAK-SLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E I+ +S++IV+ ++ + L +VM+Y+P G L + + + ++
Sbjct: 55 FQREIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLL 114
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
Y +++ ++ + VHRD+ N+L++ H+K+ADFG
Sbjct: 115 LYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFG 156
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 60 MAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLAL 118
+AH + +V H F+D +++V++ L+ L + E A++Y ++VL
Sbjct: 74 LAH---QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 130
Query: 119 DAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRL 165
+H +HRD+K N+ L++ +K+ DFG ++ G K L
Sbjct: 131 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL 177
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY-- 110
F +E +M E +VQL +A + +Y+V +YM G L++ + + K+
Sbjct: 227 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKG-----EMGKYLRL 280
Query: 111 ------CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
A++ + + + +VHRD++ N+L+ ++ K+ADFG
Sbjct: 281 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 326
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 60 MAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLAL 118
+AH + +V H F+D +++V++ L+ L + E A++Y ++VL
Sbjct: 78 LAH---QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 134
Query: 119 DAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRL 165
+H +HRD+K N+ L++ +K+ DFG ++ G K L
Sbjct: 135 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL 181
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 76 QDAKSLYMVMDYMPGGDLVNL---MSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVK 132
Q +K+ ++ +Y+ D L +++YD+ ++Y E++ ALD H G +HRDVK
Sbjct: 99 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDI-----RYYIYELLKALDYCHSQGIMHRDVK 153
Query: 133 PDNMLLDKH-GHLKLADFGTC 152
P N+++D L+L D+G
Sbjct: 154 PHNVMIDHELRKLRLIDWGLA 174
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 44.3 bits (103), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 67/134 (50%), Gaps = 10/134 (7%)
Query: 28 LLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHAN-----SEWIVQLHFAFQDAKSLY 82
+L + +YA+ +Y ++ +D+ R+ +A+ N S+ I++L+ + +Y
Sbjct: 47 VLNEKKQIYAI--KYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIY 104
Query: 83 MVMDYMPGGDLVNLMSNYDVPEKWA-KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKH 141
MVM+ DL + + + W K Y ++ A+ IH G VH D+KP N L+
Sbjct: 105 MVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI-VD 162
Query: 142 GHLKLADFGTCMRM 155
G LKL DFG +M
Sbjct: 163 GMLKLIDFGIANQM 176
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 9/79 (11%)
Query: 76 QDAKSLYMVMDYMPGGDLVNL---MSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVK 132
Q +K+ ++ +Y+ D L +++YD+ ++Y E++ ALD H G +HRDVK
Sbjct: 100 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDI-----RYYIYELLKALDYCHSQGIMHRDVK 154
Query: 133 PDNMLLDKH-GHLKLADFG 150
P N+++D L+L D+G
Sbjct: 155 PHNVMIDHELRKLRLIDWG 173
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 60 MAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLAL 118
+AH + +V H F+D +++V++ L+ L + E A++Y ++VL
Sbjct: 74 LAH---QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 130
Query: 119 DAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRL 165
+H +HRD+K N+ L++ +K+ DFG ++ G K L
Sbjct: 131 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTL 177
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 9/79 (11%)
Query: 76 QDAKSLYMVMDYMPGGDLVNL---MSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVK 132
Q +K+ ++ +Y+ D L +++YD+ ++Y E++ ALD H G +HRDVK
Sbjct: 99 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDI-----RYYIYELLKALDYCHSQGIMHRDVK 153
Query: 133 PDNMLLDKH-GHLKLADFG 150
P N+++D L+L D+G
Sbjct: 154 PHNVMIDHELRKLRLIDWG 172
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 76 QDAKSLYMVMDYMPGGDLVNL---MSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVK 132
Q +K+ ++ +Y+ D L +++YD+ ++Y E++ ALD H G +HRDVK
Sbjct: 98 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDI-----RYYIYELLKALDYCHSQGIMHRDVK 152
Query: 133 PDNMLLDKH-GHLKLADFGTC 152
P N+++D L+L D+G
Sbjct: 153 PHNVMIDHELRKLRLIDWGLA 173
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 76 QDAKSLYMVMDYMPGGDLVNL---MSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVK 132
Q +K+ ++ +Y+ D L +++YD+ ++Y E++ ALD H G +HRDVK
Sbjct: 98 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDI-----RYYIYELLKALDYCHSQGIMHRDVK 152
Query: 133 PDNMLLDKH-GHLKLADFGTC 152
P N+++D L+L D+G
Sbjct: 153 PHNVMIDHELRKLRLIDWGLA 173
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 102 VPEKWAKFYCAEVVLALDAIHC-LGFVHRDVKPDNMLLDKHGHLKLADFG 150
+PE +V AL+ +H L +HRDVKP N+L++ G +K+ DFG
Sbjct: 106 IPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFG 155
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 76 QDAKSLYMVMDYMPGGDLVNL---MSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVK 132
Q +K+ ++ +Y+ D L +++YD+ ++Y E++ ALD H G +HRDVK
Sbjct: 119 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDI-----RYYIYELLKALDYCHSQGIMHRDVK 173
Query: 133 PDNMLLDKH-GHLKLADFGTC 152
P N+++D L+L D+G
Sbjct: 174 PHNVMIDHELRKLRLIDWGLA 194
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 44.3 bits (103), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F K+L Y+VM+ M +L
Sbjct: 58 SRPFQ-NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL 115
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 116 XQVI-QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG 171
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F K+L Y+VM+ M +L
Sbjct: 58 SRPFQ-NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL 115
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 116 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG 171
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 76 QDAKSLYMVMDYMPGGDLVNL---MSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVK 132
Q +K+ ++ +Y+ D L +++YD+ ++Y E++ ALD H G +HRDVK
Sbjct: 98 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDI-----RYYIYELLKALDYCHSQGIMHRDVK 152
Query: 133 PDNMLLDKH-GHLKLADFGTC 152
P N+++D L+L D+G
Sbjct: 153 PHNVMIDHELRKLRLIDWGLA 173
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 43.9 bits (102), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 54/124 (43%), Gaps = 15/124 (12%)
Query: 34 TLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL 93
+ L Y + +R D F E IM + I+ L +K + +V +YM G L
Sbjct: 54 AIKTLKVGYTEKQRRD---FLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSL 110
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKL 146
+ D +F ++V L I +G+VHRD+ N+L++ + K+
Sbjct: 111 DTFLKKND-----GQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINSNLVCKV 165
Query: 147 ADFG 150
+DFG
Sbjct: 166 SDFG 169
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF--- 109
F +E +M E +VQL +A + +Y+V +YM G L++ + K+ +
Sbjct: 57 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMNKGSLLDFLKGET--GKYLRLPQL 113
Query: 110 --YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
A++ + + + +VHRD++ N+L+ ++ K+ADFG
Sbjct: 114 VDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 156
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 9/79 (11%)
Query: 76 QDAKSLYMVMDYMPGGDLVNL---MSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVK 132
Q +K+ ++ +Y+ D L +++YD+ ++Y E++ ALD H G +HRDVK
Sbjct: 98 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDI-----RYYIYELLKALDYCHSQGIMHRDVK 152
Query: 133 PDNMLLDKH-GHLKLADFG 150
P N+++D L+L D+G
Sbjct: 153 PHNVMIDHELRKLRLIDWG 171
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLH--FAFQDA---KSLYMVMDYMPGGDLVNLMSN-YDV 102
D E I+ S++I++LH +D LY+V++ + DL L +
Sbjct: 70 DCKRILREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIFL 128
Query: 103 PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
E+ K ++L IH G +HRD+KP N LL++ +K+ DFG +N
Sbjct: 129 TEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLLNQDCSVKICDFGLARTIN 182
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 60 MAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLAL 118
+AH + +V H F+D +++V++ L+ L + E A++Y ++VL
Sbjct: 72 LAH---QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 128
Query: 119 DAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRL 165
+H +HRD+K N+ L++ +K+ DFG ++ G K L
Sbjct: 129 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL 175
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F KSL Y+VM+ M +L
Sbjct: 58 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL 115
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 116 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 171
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 9/79 (11%)
Query: 76 QDAKSLYMVMDYMPGGDLVNL---MSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVK 132
Q +K+ ++ +Y+ D L +++YD+ ++Y E++ ALD H G +HRDVK
Sbjct: 98 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDI-----RYYIYELLKALDYCHSQGIMHRDVK 152
Query: 133 PDNMLLDKH-GHLKLADFG 150
P N+++D L+L D+G
Sbjct: 153 PHNVMIDHELRKLRLIDWG 171
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 17/148 (11%)
Query: 54 WE-ERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY 110
W+ E +I+ E IV+ +D KS+ +VM+Y+P G L + + + V +
Sbjct: 57 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLF 116
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGRNG- 169
++ + +H ++HR + N+LLD +K+ DFG + G E R+ +G
Sbjct: 117 AQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGL-AKAVPEGHEYYRVREDGD 175
Query: 170 ----------IEEIKAHPFFINDQWTFS 187
++E K ++ +D W+F
Sbjct: 176 SPVFWYAPECLKECKF--YYASDVWSFG 201
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 17/148 (11%)
Query: 54 WE-ERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY 110
W+ E +I+ E IV+ +D KS+ +VM+Y+P G L + + + V +
Sbjct: 58 WQREIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLF 117
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGRNG- 169
++ + +H ++HR + N+LLD +K+ DFG + G E R+ +G
Sbjct: 118 AQQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGL-AKAVPEGHEYYRVREDGD 176
Query: 170 ----------IEEIKAHPFFINDQWTFS 187
++E K ++ +D W+F
Sbjct: 177 SPVFWYAPECLKECKF--YYASDVWSFG 202
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F K+L Y+VM+ M +L
Sbjct: 58 SRPFQ-NQTHAKRAYRELVLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL 115
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 116 XQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG 171
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 60 MAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLAL 118
+AH + +V H F+D +++V++ L+ L + E A++Y ++VL
Sbjct: 96 LAH---QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 152
Query: 119 DAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRL 165
+H +HRD+K N+ L++ +K+ DFG ++ G K L
Sbjct: 153 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL 199
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 57/117 (48%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F KSL Y+VM+ M
Sbjct: 58 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN-- 114
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ + ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 115 LSQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 171
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY-- 110
F +E +M E +VQL +A + +Y+V +YM G L++ + + K+
Sbjct: 60 FLQEAQVMKKIRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKG-----EMGKYLRL 113
Query: 111 ------CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
A++ + + + +VHRD++ N+L+ ++ K+ADFG
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 159
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 4/107 (3%)
Query: 60 MAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLAL 118
+AH + +V H F+D +++V++ L+ L + E A++Y ++VL
Sbjct: 98 LAH---QHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGC 154
Query: 119 DAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRL 165
+H +HRD+K N+ L++ +K+ DFG ++ G K L
Sbjct: 155 QYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVL 201
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 56 ERDIMAHANSEW--IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCA 112
+R+I+ H + IV+ L +VM+Y GG+L + N E A+F+
Sbjct: 62 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 121
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKH--GHLKLADFG 150
+++ + H + HRD+K +N LLD LK+ DFG
Sbjct: 122 QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICDFG 161
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F KSL Y+VM+ M +L
Sbjct: 60 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL 117
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 118 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 173
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY-- 110
F +E +M E +VQL +A + +Y+V +YM G L++ + + K+
Sbjct: 49 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKG-----EMGKYLRL 102
Query: 111 ------CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
A++ + + + +VHRD++ N+L+ ++ K+ADFG
Sbjct: 103 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 148
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 43.9 bits (102), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F KSL Y+VM+ M +L
Sbjct: 63 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL 120
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 121 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 176
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 35 LYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV 94
+ L Y + +R D F E IM + I++L +K + +V + M G L
Sbjct: 78 IKTLKVGYTEKQRRD---FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 95 NLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKLA 147
+ + +D A+F ++V L I +G+VHRD+ N+L++ + K++
Sbjct: 135 SFLRKHD-----AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVS 189
Query: 148 DFG 150
DFG
Sbjct: 190 DFG 192
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F K+L Y+VM+ M +L
Sbjct: 96 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL 153
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 154 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 209
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY-- 110
F +E +M E +VQL +A + +Y+V +YM G L++ + + K+
Sbjct: 51 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKG-----EMGKYLRL 104
Query: 111 ------CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
A++ + + + +VHRD++ N+L+ ++ K+ADFG
Sbjct: 105 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 150
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F KSL Y+VM+ M +L
Sbjct: 58 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL 115
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 116 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 171
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F KSL Y+VM+ M +L
Sbjct: 58 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL 115
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 116 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 171
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F K+L Y+VM+ M +L
Sbjct: 59 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL 116
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 117 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 172
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY-- 110
F +E +M E +VQL +A + +Y+V +YM G L++ + + K+
Sbjct: 60 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKG-----EMGKYLRL 113
Query: 111 ------CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
A++ + + + +VHRD++ N+L+ ++ K+ADFG
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 159
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F KSL Y+VM+ M +L
Sbjct: 58 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL 115
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 116 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 171
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F KSL Y+VM+ M +L
Sbjct: 52 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL 109
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 110 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 165
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F KSL Y+VM+ M +L
Sbjct: 59 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL 116
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 117 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 172
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F KSL Y+VM+ M +L
Sbjct: 58 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM-DANL 115
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 116 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 171
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 15/123 (12%)
Query: 35 LYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV 94
+ L Y + +R D F E IM + I++L +K + +V + M G L
Sbjct: 49 IKTLKVGYTEKQRRD---FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 105
Query: 95 NLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKLA 147
+ + +D A+F ++V L I +G+VHRD+ N+L++ + K++
Sbjct: 106 SFLRKHD-----AQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVS 160
Query: 148 DFG 150
DFG
Sbjct: 161 DFG 163
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F K+L Y+VM+ M +L
Sbjct: 59 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL 116
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 117 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 172
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 53/103 (51%), Gaps = 8/103 (7%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF--- 109
F +E +M E +VQL +A + +Y+V +YM G L++ + K+ +
Sbjct: 57 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMNKGSLLDFLKGET--GKYLRLPQL 113
Query: 110 --YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
A++ + + + +VHRD++ N+L+ ++ K+ADFG
Sbjct: 114 VDMSAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 156
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F K+L Y+VM+ M +L
Sbjct: 57 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL 114
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 115 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 170
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F K+L Y+VM+ M +L
Sbjct: 51 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL 108
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 109 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 164
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F K+L Y+VM+ M +L
Sbjct: 58 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL 115
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 116 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 171
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F K+L Y+VM+ M +L
Sbjct: 52 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL 109
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 110 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 165
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F K+L Y+VM+ M +L
Sbjct: 58 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL 115
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 116 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 171
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F K+L Y+VM+ M +L
Sbjct: 52 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL 109
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 110 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 165
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F K+L Y+VM+ M +L
Sbjct: 96 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL 153
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 154 CQVI-QMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 209
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Query: 56 ERDIMAHANSEW--IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCA 112
+R+I+ H + IV+ L ++M+Y GG+L + N E A+F+
Sbjct: 64 QREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQ 123
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKH--GHLKLADFG 150
+++ + H + HRD+K +N LLD LK+ DFG
Sbjct: 124 QLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFG 163
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 13/148 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD----VPEKWAK 108
F EE ++M + +V+L+ + +Y++ +YM G L++ + + + + K
Sbjct: 55 FLEEANLMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLID 114
Query: 109 FYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR- 167
F A++ + I ++HRD++ N+L+ + K+ADFG R+ + T R G
Sbjct: 115 F-SAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLA-RVIEDNEYTAREGAK 172
Query: 168 -----NGIEEIKAHPFFI-NDQWTFSNL 189
E I F I +D W+F L
Sbjct: 173 FPIKWTAPEAINFGCFTIKSDVWSFGIL 200
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY-- 110
F +E +M E +VQL +A + +Y+V +YM G L++ + + K+
Sbjct: 60 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVCEYMSKGSLLDFLKG-----EMGKYLRL 113
Query: 111 ------CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
A++ + + + +VHRD++ N+L+ ++ K+ADFG
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 159
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F K+L Y+VM+ M +L
Sbjct: 51 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL 108
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 109 XQVI-QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG 164
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 58/117 (49%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E +M N + I+ L F K+L Y+VM+ M +L
Sbjct: 58 SRPFQ-NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL 115
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 116 XQVI-QMELDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFG 171
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Query: 46 KRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPE 104
K D E ++ + I++L F+ + +V++ + GG+L + ++ E
Sbjct: 88 KTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSE 147
Query: 105 KWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK---HGHLKLADFG 150
+ A +++ A+ +H G VHRD+KP+N+L LK+ADFG
Sbjct: 148 RDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFG 196
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 58 DIMAHANSEWIVQLHFAFQDA-KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVL 116
D+ A + ++ +++ F+ + L +D P L P + K + +
Sbjct: 81 DVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGL---------PAETIKDLMRQFLR 131
Query: 117 ALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
LD +H VHRD+KP+N+L+ G +KLADFG
Sbjct: 132 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFG 165
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 58 DIMAHANSEWIVQLHFAFQDA-KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVL 116
D+ A + ++ +++ F+ + L +D P L P + K + +
Sbjct: 73 DVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGL---------PAETIKDLMRQFLR 123
Query: 117 ALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
LD +H VHRD+KP+N+L+ G +KLADFG
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFG 157
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 6/103 (5%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDV--PEKWAKFY 110
F +E + A E +V+L D L +V Y P G L++ +S D P W
Sbjct: 68 FDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSW-HXR 126
Query: 111 CAEVVLALDAIHCLG---FVHRDVKPDNMLLDKHGHLKLADFG 150
C A + I+ L +HRD+K N+LLD+ K++DFG
Sbjct: 127 CKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFG 169
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 58 DIMAHANSEWIVQLHFAFQDA-KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVL 116
D+ A + ++ +++ F+ + L +D P L P + K + +
Sbjct: 73 DVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGL---------PAETIKDLMRQFLR 123
Query: 117 ALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
LD +H VHRD+KP+N+L+ G +KLADFG
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFG 157
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 10/94 (10%)
Query: 58 DIMAHANSEWIVQLHFAFQDA-KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVL 116
D+ A + ++ +++ F+ + L +D P L P + K + +
Sbjct: 73 DVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGL---------PAETIKDLMRQFLR 123
Query: 117 ALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
LD +H VHRD+KP+N+L+ G +KLADFG
Sbjct: 124 GLDFLHANCIVHRDLKPENILVTSGGTVKLADFG 157
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 12/147 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKF-- 109
F E ++M + +V+LH A + +Y++ ++M G L++ L S+ + K
Sbjct: 230 FLAEANVMKTLQHDKLVKLH-AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 288
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
+ A++ + I ++HRD++ N+L+ K+ADFG R+ + T R G
Sbjct: 289 FSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA-RVIEDNEYTAREGAKF 347
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E I F I +D W+F L
Sbjct: 348 PIKWTAPEAINFGSFTIKSDVWSFGIL 374
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 40/93 (43%), Gaps = 5/93 (5%)
Query: 78 AKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAE----VVLALDAIHCLGFVHRDVKP 133
K L++ M++ G L + EK K E + +D IH +HRD+KP
Sbjct: 106 TKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKP 164
Query: 134 DNMLLDKHGHLKLADFGTCMRMNKTGTETKRLG 166
N+ L +K+ DFG + G T+ G
Sbjct: 165 SNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKG 197
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 102 VPEKWAKFYCAEVVLALDAIHC-LGFVHRDVKPDNMLLDKHGHLKLADFG 150
+PE +V AL+ +H L +HRDVKP N+L++ G +K DFG
Sbjct: 133 IPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFG 182
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 68/147 (46%), Gaps = 12/147 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKF-- 109
F E ++M + +V+LH A + +Y++ ++M G L++ L S+ + K
Sbjct: 57 FLAEANVMKTLQHDKLVKLH-AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 115
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
+ A++ + I ++HRD++ N+L+ K+ADFG R+ + T R G
Sbjct: 116 FSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLA-RVIEDNEYTAREGAKF 174
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E I F I +D W+F L
Sbjct: 175 PIKWTAPEAINFGSFTIKSDVWSFGIL 201
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKF 109
F E ++M + +V+L +A + +Y++ +YM G LV+ + S +
Sbjct: 55 FLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
A++ + I ++HRD++ N+L+ K+ADFG R+ + T R G
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDAEXTAREGAKF 172
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E I F I +D W+F L
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGIL 199
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLM--SNYDVPEKWAKFYCAEVVLALDAIHCLG 125
IV L + L +V ++M DL ++ + + + K Y +++ + H
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 126 FVHRDVKPDNMLLDKHGHLKLADFG 150
+HRD+KP N+L++ G LKLADFG
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFG 164
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKF 109
F E ++M + +V+L +A + +Y++ +YM G LV+ + S +
Sbjct: 61 FLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
A++ + I ++HRD++ N+L+ K+ADFG R+ + T R G
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKF 178
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E I F I +D W+F L
Sbjct: 179 PIKWTAPEAINYGTFTIKSDVWSFGIL 205
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKF 109
F E ++M + +V+L +A + +Y++ +YM G LV+ + S +
Sbjct: 63 FLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 121
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
A++ + I ++HRD++ N+L+ K+ADFG R+ + T R G
Sbjct: 122 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKF 180
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E I F I +D W+F L
Sbjct: 181 PIKWTAPEAINYGTFTIKSDVWSFGIL 207
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 52/106 (49%), Gaps = 14/106 (13%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY-- 110
F +E +M E +VQL +A + +Y+V +YM G L++ + + K+
Sbjct: 60 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGSLLDFLKG-----EMGKYLRL 113
Query: 111 ------CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
A++ + + + +VHRD+ N+L+ ++ K+ADFG
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLAAANILVGENLVCKVADFG 159
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 53/106 (50%), Gaps = 14/106 (13%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY-- 110
F +E +M E +VQL +A + +Y+V +YM G L++ + + K+
Sbjct: 60 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIYIVTEYMSKGCLLDFLKG-----EMGKYLRL 113
Query: 111 ------CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
A++ + + + +VHRD++ N+L+ ++ K+ADFG
Sbjct: 114 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFG 159
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 53/115 (46%), Gaps = 2/115 (1%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK--FY 110
F +E +M +++ K L + +Y+ GG L ++ + D W++ +
Sbjct: 54 FLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSF 113
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRL 165
++ + +H + +HRD+ N L+ ++ ++ +ADFG M T+ + L
Sbjct: 114 AKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGL 168
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKF 109
F E ++M + +V+L +A + +Y++ +YM G LV+ + S +
Sbjct: 64 FLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 122
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
A++ + I ++HRD++ N+L+ K+ADFG R+ + T R G
Sbjct: 123 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKF 181
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E I F I +D W+F L
Sbjct: 182 PIKWTAPEAINYGTFTIKSDVWSFGIL 208
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 74 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 133
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 134 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 167
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 75 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 134
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 135 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 168
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 3/85 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLM--SNYDVPEKWAKFYCAEVVLALDAIHCLG 125
IV L + L +V ++M DL ++ + + + K Y +++ + H
Sbjct: 81 IVSLIDVIHSERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHR 139
Query: 126 FVHRDVKPDNMLLDKHGHLKLADFG 150
+HRD+KP N+L++ G LKLADFG
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFG 164
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 9/119 (7%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF--- 109
F +E +M E +VQL +A + + +V +YM G L++ + K+ +
Sbjct: 50 FLQEAQVMKKLRHEKLVQL-YAVVSEEPIXIVTEYMSKGSLLDFLKGET--GKYLRLPQL 106
Query: 110 --YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLG 166
A++ + + + +VHRD++ N+L+ ++ K+ADFG R+ + T R G
Sbjct: 107 VDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLA-RLIEDNEXTARQG 164
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 76 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 135
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 169
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKF 109
F E ++M + +V+L +A + +Y++ +YM G LV+ + S +
Sbjct: 55 FLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
A++ + I ++HRD++ N+L+ K+ADFG R+ + T R G
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKF 172
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E I F I +D W+F L
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGIL 199
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKF 109
F E ++M + +V+L +A + +Y++ +YM G LV+ + S +
Sbjct: 55 FLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
A++ + I ++HRD++ N+L+ K+ADFG R+ + T R G
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKF 172
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E I F I +D W+F L
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGIL 199
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKF 109
F E ++M + +V+L +A + +Y++ +YM G LV+ + S +
Sbjct: 56 FLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 114
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
A++ + I ++HRD++ N+L+ K+ADFG R+ + T R G
Sbjct: 115 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKF 173
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E I F I +D W+F L
Sbjct: 174 PIKWTAPEAINYGTFTIKSDVWSFGIL 200
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKF 109
F E ++M + +V+L +A + +Y++ +YM G LV+ + S +
Sbjct: 50 FLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 108
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
A++ + I ++HRD++ N+L+ K+ADFG R+ + T R G
Sbjct: 109 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKF 167
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E I F I +D W+F L
Sbjct: 168 PIKWTAPEAINYGTFTIKSDVWSFGIL 194
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNXG 130
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 164
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 164
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKF 109
F E ++M + +V+L +A + +Y++ +YM G LV+ + S +
Sbjct: 57 FLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 115
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
A++ + I ++HRD++ N+L+ K+ADFG R+ + T R G
Sbjct: 116 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEXTAREGAKF 174
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E I F I +D W+F L
Sbjct: 175 PIKWTAPEAINYGTFTIKSDVWSFGIL 201
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 56/123 (45%), Gaps = 15/123 (12%)
Query: 35 LYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLV 94
+ L Y + +R D F E IM + I++L +K + +V + M G L
Sbjct: 78 IKTLKVGYTEKQRRD---FLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLD 134
Query: 95 NLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKLA 147
+ + +D A+F ++V L I +G VHRD+ N+L++ + K++
Sbjct: 135 SFLRKHD-----AQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVS 189
Query: 148 DFG 150
DFG
Sbjct: 190 DFG 192
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y+++++M G+L++ + + E A +
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY 113
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKF 172
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERP 232
Query: 219 E 219
E
Sbjct: 233 E 233
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 73 FAFQDAKS-LYMVMDYMPGGDLVNLMSNYDVPE---KWAKFY--CAEVVLALDAIHCLGF 126
F D ++ + ++ YM G+L + D+P W + C L +H
Sbjct: 101 IGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAI 160
Query: 127 VHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+HRDVK N+LLD++ K+ DFG ++K GTE
Sbjct: 161 IHRDVKSINILLDENFVPKITDFG----ISKKGTE 191
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 73 FAFQDAKS-LYMVMDYMPGGDLVNLMSNYDVPE---KWAKFY--CAEVVLALDAIHCLGF 126
F D ++ + ++ YM G+L + D+P W + C L +H
Sbjct: 101 IGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAI 160
Query: 127 VHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+HRDVK N+LLD++ K+ DFG ++K GTE
Sbjct: 161 IHRDVKSINILLDENFVPKITDFG----ISKKGTE 191
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 98 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 157
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 158 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 191
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 71 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 130
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 164
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 183
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 52/101 (51%), Gaps = 4/101 (3%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKF-- 109
F E ++M + +V+LH A + +Y++ ++M G L++ L S+ + K
Sbjct: 224 FLAEANVMKTLQHDKLVKLH-AVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLID 282
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ A++ + I ++HRD++ N+L+ K+ADFG
Sbjct: 283 FSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFG 323
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 184
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSL---YMVMDYMPGGDLVNLMSN----YDVPEKWAK 108
E +++ N + IV+L FA ++ + ++M++ P G L ++ Y +PE
Sbjct: 57 EFEVLKKLNHKNIVKL-FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL 115
Query: 109 FYCAEVVLALDAIHCLGFVHRDVKPDNMLL----DKHGHLKLADFGTCMRM 155
+VV ++ + G VHR++KP N++ D KL DFG +
Sbjct: 116 IVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 90 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 149
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 150 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 183
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKS-LYMVMDYMPGGDLVNLMSNYD---VPEKWAK 108
F E +M +VQL + K LY+V +YM G LV+ + + +
Sbjct: 233 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 292
Query: 109 FYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR- 167
+ +V A++ + FVHRD+ N+L+ + K++DFG + K + T+ G+
Sbjct: 293 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKL 348
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E ++ F +D W+F L
Sbjct: 349 PVKWTAPEALREKKFSTKSDVWSFGIL 375
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 184
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 211
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 79 KSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
+ L ++M+ M GG+L + + E+ A ++ A+ +H HRDVKP+N
Sbjct: 80 RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN 139
Query: 136 MLL---DKHGHLKLADFGTCMRMNKTGTET 162
+L +K LKL DFG + +T
Sbjct: 140 LLYTSKEKDAVLKLTDFGFAKETTQNALQT 169
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 91 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 150
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 151 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 184
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 7/114 (6%)
Query: 49 DSAFFWEERDIMAHANSEWIVQLH-FAFQDA----KSLYMVMDYMPGGDLVNLMSN-YDV 102
D E I+ S++I++L+ D LY+V++ + DL L +
Sbjct: 68 DCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE-IADSDLKKLFKTPIFL 126
Query: 103 PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
E+ K ++L + IH G +HRD+KP N LL++ +K+ DFG +N
Sbjct: 127 TEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 79 KSLYMVMDYMPGGDL---VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
+ L ++M+ M GG+L + + E+ A ++ A+ +H HRDVKP+N
Sbjct: 99 RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN 158
Query: 136 MLL---DKHGHLKLADFGTCMRMNKTGTET 162
+L +K LKL DFG + +T
Sbjct: 159 LLYTSKEKDAVLKLTDFGFAKETTQNALQT 188
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 211
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 53/102 (51%), Gaps = 5/102 (4%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD----VPEKWAK 108
F EE ++M + +V+L+ + +Y++ ++M G L++ + + + + K
Sbjct: 54 FLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLID 113
Query: 109 FYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
F A++ + I ++HRD++ N+L+ + K+ADFG
Sbjct: 114 F-SAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFG 154
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 11/146 (7%)
Query: 25 FEYLLKYRYTLYALYSRYFQIKRSD--------SAFFWEERDIMAHANSEWIVQLHFAFQ 76
FE L+ Y Y ++R + F E + N IV F
Sbjct: 21 FEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFI 80
Query: 77 DAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCAEVVL-ALDAIHCLGFVHRDVKP 133
L++V +M G +L+ + D + A Y + VL ALD IH +G+VHR VK
Sbjct: 81 ADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKA 140
Query: 134 DNMLLDKHGHLKLADFGTCMRMNKTG 159
++L+ G + L+ + + M G
Sbjct: 141 SHILISVDGKVYLSGLRSNLSMISHG 166
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 61/150 (40%), Gaps = 11/150 (7%)
Query: 25 FEYLLKYRYTLYALYSRYFQIKRSD--------SAFFWEERDIMAHANSEWIVQLHFAFQ 76
FE L+ Y Y ++R + F E + N IV F
Sbjct: 37 FEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFI 96
Query: 77 DAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCAEVVL-ALDAIHCLGFVHRDVKP 133
L++V +M G +L+ + D + A Y + VL ALD IH +G+VHR VK
Sbjct: 97 ADNELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKA 156
Query: 134 DNMLLDKHGHLKLADFGTCMRMNKTGTETK 163
++L+ G + L+ + + M G +
Sbjct: 157 SHILISVDGKVYLSGLRSNLSMISHGQRQR 186
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 110 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 169
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 170 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 203
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E ++ N + I+ L F K+L Y+VM+ M +L
Sbjct: 56 SRPFQ-NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL 113
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ + ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 114 CQVI-HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 169
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 118 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 177
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 211
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 104 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 163
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 197
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 103 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 162
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 196
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKS-LYMVMDYMPGGDLVNLMSNYD---VPEKWAK 108
F E +M +VQL + K LY+V +YM G LV+ + + +
Sbjct: 61 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 120
Query: 109 FYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR- 167
+ +V A++ + FVHRD+ N+L+ + K++DFG + K + T+ G+
Sbjct: 121 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKL 176
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E ++ F +D W+F L
Sbjct: 177 PVKWTAPEALREKKFSTKSDVWSFGIL 203
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 59/117 (50%), Gaps = 9/117 (7%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSL------YMVMDYMPGGDL 93
SR FQ ++ + + E ++ N + I+ L F K+L Y+VM+ M +L
Sbjct: 58 SRPFQ-NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANL 115
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ + ++ + + +++ + +H G +HRD+KP N+++ LK+ DFG
Sbjct: 116 CQVI-HMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFG 171
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 13/78 (16%)
Query: 80 SLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDA-------IHCLGFVHRDVK 132
S+Y+V D+ DL L+SN V KF +E+ + IH +HRD+K
Sbjct: 99 SIYLVFDFCEH-DLAGLLSNVLV-----KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMK 152
Query: 133 PDNMLLDKHGHLKLADFG 150
N+L+ + G LKLADFG
Sbjct: 153 AANVLITRDGVLKLADFG 170
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKF 109
F E ++M + +V+L +A + +Y++ +YM G LV+ + S +
Sbjct: 65 FLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 123
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
A++ + I ++HRD++ N+L+ K+ADFG R+ + T R G
Sbjct: 124 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKF 182
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E I F I +D W+F L
Sbjct: 183 PIKWTAPEAINYGTFTIKSDVWSFGIL 209
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKF 109
F E ++M + +V+L +A + +Y++ +YM G LV+ + S +
Sbjct: 60 FLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 118
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
A++ + I ++HRD++ N+L+ K+ADFG R+ + T R G
Sbjct: 119 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKF 177
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E I F I +D W+F L
Sbjct: 178 PIKWTAPEAINYGTFTIKSDVWSFGIL 204
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKS-LYMVMDYMPGGDLVNLMSNYD---VPEKWAK 108
F E +M +VQL + K LY+V +YM G LV+ + + +
Sbjct: 46 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 105
Query: 109 FYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR- 167
+ +V A++ + FVHRD+ N+L+ + K++DFG + K + T+ G+
Sbjct: 106 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKL 161
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E ++ F +D W+F L
Sbjct: 162 PVKWTAPEALREKKFSTKSDVWSFGIL 188
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKF 109
F E ++M + +V+L +A + +Y++ +YM G LV+ + S +
Sbjct: 61 FLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 119
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
A++ + I ++HRD++ N+L+ K+ADFG R+ + T R G
Sbjct: 120 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKF 178
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E I F I +D W+F L
Sbjct: 179 PIKWTAPEAINYGTFTIKSDVWSFGIL 205
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLG 125
+++L F+ S ++++ P DL + ++ + E+ A+ + +V+ A+ H G
Sbjct: 123 VIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHCHNCG 182
Query: 126 FVHRDVKPDNMLLD-KHGHLKLADFGTCMRMNKT 158
+HRD+K +N+L+D G LKL DFG+ + T
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSGALLKDT 216
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKF 109
F E ++M + +V+L +A + +Y++ +YM G LV+ + S +
Sbjct: 55 FLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 113
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
A++ + I ++HRD++ N+L+ K+ADFG R+ + T R G
Sbjct: 114 MAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKF 172
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E I F I +D W+F L
Sbjct: 173 PIKWTAPEAINYGTFTIKSDVWSFGIL 199
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 46 KRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM--SNYDVP 103
+++D+ E IM ++ +IV+L Q A++L +VM+ GG L + ++P
Sbjct: 50 EKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIP 108
Query: 104 EKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+V + + + FVHRD+ N+LL + K++DFG
Sbjct: 109 VSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFG 155
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 12/111 (10%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSL---YMVMDYMPGGDLVNLMSN----YDVPEKWAK 108
E +++ N + IV+L FA ++ + ++M++ P G L ++ Y +PE
Sbjct: 57 EFEVLKKLNHKNIVKL-FAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFL 115
Query: 109 FYCAEVVLALDAIHCLGFVHRDVKPDNMLL----DKHGHLKLADFGTCMRM 155
+VV ++ + G VHR++KP N++ D KL DFG +
Sbjct: 116 IVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAAREL 166
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 79 KSLYMVMDYMPGGDLVNLMSNYD---VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
K L +VM+ + GG+L + + + E+ A + A+ +H + HRDVKP+N
Sbjct: 138 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 197
Query: 136 MLLDK---HGHLKLADFG 150
+L + LKL DFG
Sbjct: 198 LLYTSKRPNAILKLTDFG 215
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 79 KSLYMVMDYMPGGDLVNLMSNYD---VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
K L +VM+ + GG+L + + + E+ A + A+ +H + HRDVKP+N
Sbjct: 132 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 191
Query: 136 MLLDK---HGHLKLADFG 150
+L + LKL DFG
Sbjct: 192 LLYTSKRPNAILKLTDFG 209
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 79 KSLYMVMDYMPGGDLVNLMSNYD---VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
K L +VM+ + GG+L + + + E+ A + A+ +H + HRDVKP+N
Sbjct: 92 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 151
Query: 136 MLLDK---HGHLKLADFG 150
+L + LKL DFG
Sbjct: 152 LLYTSKRPNAILKLTDFG 169
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 79 KSLYMVMDYMPGGDLVNLMSNYD---VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
K L +VM+ + GG+L + + + E+ A + A+ +H + HRDVKP+N
Sbjct: 94 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 153
Query: 136 MLLDK---HGHLKLADFG 150
+L + LKL DFG
Sbjct: 154 LLYTSKRPNAILKLTDFG 171
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 79 KSLYMVMDYMPGGDLVNLMSNYD---VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
K L +VM+ + GG+L + + + E+ A + A+ +H + HRDVKP+N
Sbjct: 88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 147
Query: 136 MLLDK---HGHLKLADFG 150
+L + LKL DFG
Sbjct: 148 LLYTSKRPNAILKLTDFG 165
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 47/98 (47%), Gaps = 14/98 (14%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAI------ 121
++ LH +++ + ++++Y GG++ +L +PE +V+ + I
Sbjct: 91 VINLHEVYENTSEIILILEYAAGGEIFSLC----LPELAEMVSENDVIRLIKQILEGVYY 146
Query: 122 -HCLGFVHRDVKPDNMLLDK---HGHLKLADFGTCMRM 155
H VH D+KP N+LL G +K+ DFG ++
Sbjct: 147 LHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKI 184
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 79 KSLYMVMDYMPGGDLVNLMSNYD---VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
K L +VM+ + GG+L + + + E+ A + A+ +H + HRDVKP+N
Sbjct: 88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 147
Query: 136 MLLDK---HGHLKLADFG 150
+L + LKL DFG
Sbjct: 148 LLYTSKRPNAILKLTDFG 165
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 79 KSLYMVMDYMPGGDLVNLMSNYD---VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
K L +VM+ + GG+L + + + E+ A + A+ +H + HRDVKP+N
Sbjct: 93 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 152
Query: 136 MLLDK---HGHLKLADFG 150
+L + LKL DFG
Sbjct: 153 LLYTSKRPNAILKLTDFG 170
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 79 KSLYMVMDYMPGGDLVNLMSNYD---VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
K L +VM+ + GG+L + + + E+ A + A+ +H + HRDVKP+N
Sbjct: 102 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 161
Query: 136 MLLDK---HGHLKLADFG 150
+L + LKL DFG
Sbjct: 162 LLYTSKRPNAILKLTDFG 179
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 79 KSLYMVMDYMPGGDLVNLMSNYD---VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
K L +VM+ + GG+L + + + E+ A + A+ +H + HRDVKP+N
Sbjct: 86 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 145
Query: 136 MLLDK---HGHLKLADFG 150
+L + LKL DFG
Sbjct: 146 LLYTSKRPNAILKLTDFG 163
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 79 KSLYMVMDYMPGGDLVNLMSNYD---VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
K L +VM+ + GG+L + + + E+ A + A+ +H + HRDVKP+N
Sbjct: 88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 147
Query: 136 MLLDK---HGHLKLADFG 150
+L + LKL DFG
Sbjct: 148 LLYTSKRPNAILKLTDFG 165
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 79 KSLYMVMDYMPGGDLVNLMSNYD---VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
K L +VM+ + GG+L + + + E+ A + A+ +H + HRDVKP+N
Sbjct: 87 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 146
Query: 136 MLLDK---HGHLKLADFG 150
+L + LKL DFG
Sbjct: 147 LLYTSKRPNAILKLTDFG 164
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 14/147 (9%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKS-LYMVMDYMPGGDLVNLMSNYD---VPEKWAK 108
F E +M +VQL + K LY+V +YM G LV+ + + +
Sbjct: 52 FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLL 111
Query: 109 FYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR- 167
+ +V A++ + FVHRD+ N+L+ + K++DFG + K + T+ G+
Sbjct: 112 KFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFG----LTKEASSTQDTGKL 167
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E ++ F +D W+F L
Sbjct: 168 PVKWTAPEALREAAFSTKSDVWSFGIL 194
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 79 KSLYMVMDYMPGGDLVNLMSNYD---VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
K L +VM+ + GG+L + + + E+ A + A+ +H + HRDVKP+N
Sbjct: 86 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN 145
Query: 136 MLLDK---HGHLKLADFG 150
+L + LKL DFG
Sbjct: 146 LLYTSKRPNAILKLTDFG 163
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y++ ++M G+L++ + + E A +
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 113
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKF 172
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERP 232
Query: 219 E 219
E
Sbjct: 233 E 233
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 59/115 (51%), Gaps = 19/115 (16%)
Query: 59 IMAHANSEWIVQLHFAF-----QDAKSLYM--VMDYMPGGDLVNLMSNY-----DVPEKW 106
++ H N IVQL F +D + +Y+ VM+Y+P L NY P
Sbjct: 75 VLHHPN---IVQLQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPIL 130
Query: 107 AKFYCAEVVLALDAIH--CLGFVHRDVKPDNMLLDKH-GHLKLADFGTCMRMNKT 158
K + +++ ++ +H + HRD+KP N+L+++ G LKL DFG+ +++ +
Sbjct: 131 IKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPS 185
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E +I+ + IV+ A ++L ++M+Y+P G L + + + K
Sbjct: 89 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 148
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMNKTGTETKRLG 166
Y +++ ++ + ++HRD+ N+L++ +K+ DFG + +K + K G
Sbjct: 149 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 208
Query: 167 RNGI-----EEIKAHPFFI-NDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEE 220
+ I E + F + +D W+F V+ EL F IEK +SP
Sbjct: 209 ESPIFWYAPESLTESKFSVASDVWSFG-------VVLYEL--------FTYIEKSKSPPA 253
Query: 221 NF 222
F
Sbjct: 254 EF 255
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 15/124 (12%)
Query: 34 TLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL 93
+ L Y + +R D F E IM + +V L K + +V+++M G L
Sbjct: 75 AIKTLKVGYTEKQRRD---FLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL 131
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKL 146
+ +D +F ++V L I +G+VHRD+ N+L++ + K+
Sbjct: 132 DAFLRKHD-----GQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNSNLVCKV 186
Query: 147 ADFG 150
+DFG
Sbjct: 187 SDFG 190
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y+++++M G+L++ + + E A +
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLY 116
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 117 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKF 175
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 176 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 235
Query: 219 E 219
E
Sbjct: 236 E 236
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 56 ERDIMAHANSEW--IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCA 112
+R+I+ H + IV+ L +VM+Y GG+L + N E A+F+
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKH--GHLKLADFG 150
+++ + H + HRD+K +N LLD LK+ FG
Sbjct: 123 QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFG 162
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 71 LHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFYCAEVVLALDAIHCLGFVH 128
L + S +V+ YM GDL N + N ++ K + +V + + FVH
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 156
Query: 129 RDVKPDNMLLDKHGHLKLADFGTCMRM---------NKTGTETKRLGRNGIEEIKAHPFF 179
RD+ N +LD+ +K+ADFG M NKTG + + +E ++ F
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP-VKWMALESLQTQKFT 215
Query: 180 I-NDQWTFSNL 189
+D W+F L
Sbjct: 216 TKSDVWSFGVL 226
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 71 LHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFYCAEVVLALDAIHCLGFVH 128
L + S +V+ YM GDL N + N ++ K + +V + + FVH
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 151
Query: 129 RDVKPDNMLLDKHGHLKLADFGTCMRM---------NKTGTETKRLGRNGIEEIKAHPFF 179
RD+ N +LD+ +K+ADFG M NKTG + + +E ++ F
Sbjct: 152 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP-VKWMALESLQTQKFT 210
Query: 180 I-NDQWTFSNL 189
+D W+F L
Sbjct: 211 TKSDVWSFGVL 221
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E +I+ + IV+ A ++L ++M+Y+P G L + + + K
Sbjct: 62 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 121
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMNKTGTETKRLG 166
Y +++ ++ + ++HRD+ N+L++ +K+ DFG + +K + K G
Sbjct: 122 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 181
Query: 167 RNGI-----EEIKAHPFFI-NDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEE 220
+ I E + F + +D W+F V+ EL F IEK +SP
Sbjct: 182 ESPIFWYAPESLTESKFSVASDVWSFG-------VVLYEL--------FTYIEKSKSPPA 226
Query: 221 NF 222
F
Sbjct: 227 EF 228
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 71 LHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFYCAEVVLALDAIHCLGFVH 128
L + S +V+ YM GDL N + N ++ K + +V + + FVH
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 154
Query: 129 RDVKPDNMLLDKHGHLKLADFGTCMRM---------NKTGTETKRLGRNGIEEIKAHPFF 179
RD+ N +LD+ +K+ADFG M NKTG + + +E ++ F
Sbjct: 155 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP-VKWMALESLQTQKFT 213
Query: 180 I-NDQWTFSNL 189
+D W+F L
Sbjct: 214 TKSDVWSFGVL 224
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E +I+ + IV+ A ++L ++M+Y+P G L + + + K
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 117
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMNKTGTETKRLG 166
Y +++ ++ + ++HRD+ N+L++ +K+ DFG + +K + K G
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 167 RNGI-----EEIKAHPFFI-NDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEE 220
+ I E + F + +D W+F V+ EL F IEK +SP
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFG-------VVLYEL--------FTYIEKSKSPPA 222
Query: 221 NF 222
F
Sbjct: 223 EF 224
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 71 LHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFYCAEVVLALDAIHCLGFVH 128
L + S +V+ YM GDL N + N ++ K + +V + + FVH
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 148
Query: 129 RDVKPDNMLLDKHGHLKLADFGTCMRM---------NKTGTETKRLGRNGIEEIKAHPFF 179
RD+ N +LD+ +K+ADFG M NKTG + + +E ++ F
Sbjct: 149 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP-VKWMALESLQTQKFT 207
Query: 180 I-NDQWTFSNL 189
+D W+F L
Sbjct: 208 TKSDVWSFGVL 218
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 71 LHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFYCAEVVLALDAIHCLGFVH 128
L + S +V+ YM GDL N + N ++ K + +V + + FVH
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 155
Query: 129 RDVKPDNMLLDKHGHLKLADFGTCMRM---------NKTGTETKRLGRNGIEEIKAHPFF 179
RD+ N +LD+ +K+ADFG M NKTG + + +E ++ F
Sbjct: 156 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP-VKWMALESLQTQKFT 214
Query: 180 I-NDQWTFSNL 189
+D W+F L
Sbjct: 215 TKSDVWSFGVL 225
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 71 LHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFYCAEVVLALDAIHCLGFVH 128
L + S +V+ YM GDL N + N ++ K + +V + + FVH
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 156
Query: 129 RDVKPDNMLLDKHGHLKLADFGTCMRM---------NKTGTETKRLGRNGIEEIKAHPFF 179
RD+ N +LD+ +K+ADFG M NKTG + + +E ++ F
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP-VKWMALESLQTQKFT 215
Query: 180 I-NDQWTFSNL 189
+D W+F L
Sbjct: 216 TKSDVWSFGVL 226
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E +I+ + IV+ A ++L ++M+Y+P G L + + + K
Sbjct: 57 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 116
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMNKTGTETKRLG 166
Y +++ ++ + ++HRD+ N+L++ +K+ DFG + +K + K G
Sbjct: 117 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 176
Query: 167 RNGI-----EEIKAHPFFI-NDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEE 220
+ I E + F + +D W+F V+ EL F IEK +SP
Sbjct: 177 ESPIFWYAPESLTESKFSVASDVWSFG-------VVLYEL--------FTYIEKSKSPPA 221
Query: 221 NF 222
F
Sbjct: 222 EF 223
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E +I+ + IV+ A ++L ++M+Y+P G L + + + K
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 117
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMNKTGTETKRLG 166
Y +++ ++ + ++HRD+ N+L++ +K+ DFG + +K + K G
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 177
Query: 167 RNGI-----EEIKAHPFFI-NDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEE 220
+ I E + F + +D W+F V+ EL F IEK +SP
Sbjct: 178 ESPIFWYAPESLTESKFSVASDVWSFG-------VVLYEL--------FTYIEKSKSPPA 222
Query: 221 NF 222
F
Sbjct: 223 EF 224
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y+++++M G+L++ + + E A +
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY 115
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 174
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 234
Query: 219 E 219
E
Sbjct: 235 E 235
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E +I+ + IV+ A ++L ++M+Y+P G L + + + K
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 135
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMNKTGTETKRLG 166
Y +++ ++ + ++HRD+ N+L++ +K+ DFG + +K + K G
Sbjct: 136 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 195
Query: 167 RNGI-----EEIKAHPFFI-NDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEE 220
+ I E + F + +D W+F V+ EL F IEK +SP
Sbjct: 196 ESPIFWYAPESLTESKFSVASDVWSFG-------VVLYEL--------FTYIEKSKSPPA 240
Query: 221 NF 222
F
Sbjct: 241 EF 242
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E +I+ + IV+ A ++L ++M+Y+P G L + + + K
Sbjct: 56 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 115
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMNKTGTETKRLG 166
Y +++ ++ + ++HRD+ N+L++ +K+ DFG + +K + K G
Sbjct: 116 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 175
Query: 167 RNGI-----EEIKAHPFFI-NDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEE 220
+ I E + F + +D W+F V+ EL F IEK +SP
Sbjct: 176 ESPIFWYAPESLTESKFSVASDVWSFG-------VVLYEL--------FTYIEKSKSPPA 220
Query: 221 NF 222
F
Sbjct: 221 EF 222
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E +I+ + IV+ A ++L ++M+Y+P G L + + + K
Sbjct: 63 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 122
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMNKTGTETKRLG 166
Y +++ ++ + ++HRD+ N+L++ +K+ DFG + +K + K G
Sbjct: 123 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 182
Query: 167 RNGI-----EEIKAHPFFI-NDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEE 220
+ I E + F + +D W+F V+ EL F IEK +SP
Sbjct: 183 ESPIFWYAPESLTESKFSVASDVWSFG-------VVLYEL--------FTYIEKSKSPPA 227
Query: 221 NF 222
F
Sbjct: 228 EF 229
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 13/78 (16%)
Query: 80 SLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDA-------IHCLGFVHRDVK 132
S+Y+V D+ DL L+SN V KF +E+ + IH +HRD+K
Sbjct: 98 SIYLVFDFCEH-DLAGLLSNVLV-----KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMK 151
Query: 133 PDNMLLDKHGHLKLADFG 150
N+L+ + G LKLADFG
Sbjct: 152 AANVLITRDGVLKLADFG 169
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E +I+ + IV+ A ++L ++M+Y+P G L + + + K
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 120
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMNKTGTETKRLG 166
Y +++ ++ + ++HRD+ N+L++ +K+ DFG + +K + K G
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 167 RNGI-----EEIKAHPFFI-NDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEE 220
+ I E + F + +D W+F V+ EL F IEK +SP
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFG-------VVLYEL--------FTYIEKSKSPPA 225
Query: 221 NF 222
F
Sbjct: 226 EF 227
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E +I+ + IV+ A ++L ++M+Y+P G L + + + K
Sbjct: 76 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 135
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMNKTGTETKRLG 166
Y +++ ++ + ++HRD+ N+L++ +K+ DFG + +K + K G
Sbjct: 136 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 195
Query: 167 RNGI-----EEIKAHPFFI-NDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEE 220
+ I E + F + +D W+F V+ EL F IEK +SP
Sbjct: 196 ESPIFWYAPESLTESKFSVASDVWSFG-------VVLYEL--------FTYIEKSKSPPA 240
Query: 221 NF 222
F
Sbjct: 241 EF 242
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E +I+ + IV+ A ++L ++M+Y+P G L + + + K
Sbjct: 65 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 124
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMNKTGTETKRLG 166
Y +++ ++ + ++HRD+ N+L++ +K+ DFG + +K + K G
Sbjct: 125 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 184
Query: 167 RNGI-----EEIKAHPFFI-NDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEE 220
+ I E + F + +D W+F V+ EL F IEK +SP
Sbjct: 185 ESPIFWYAPESLTESKFSVASDVWSFG-------VVLYEL--------FTYIEKSKSPPA 229
Query: 221 NF 222
F
Sbjct: 230 EF 231
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y+++++M G+L++ + + E A +
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLY 115
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 174
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 234
Query: 219 E 219
E
Sbjct: 235 E 235
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E +I+ + IV+ A ++L ++M+Y+P G L + + + K
Sbjct: 64 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 123
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMNKTGTETKRLG 166
Y +++ ++ + ++HRD+ N+L++ +K+ DFG + +K + K G
Sbjct: 124 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 183
Query: 167 RNGI-----EEIKAHPFFI-NDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEE 220
+ I E + F + +D W+F V+ EL F IEK +SP
Sbjct: 184 ESPIFWYAPESLTESKFSVASDVWSFG-------VVLYEL--------FTYIEKSKSPPA 228
Query: 221 NF 222
F
Sbjct: 229 EF 230
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 56 ERDIMAHANSEW--IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCA 112
+R+I+ H + IV+ L +VM+Y GG+L + N E A+F+
Sbjct: 63 KREIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQ 122
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKH--GHLKLADFG 150
+++ + H + HRD+K +N LLD LK+ FG
Sbjct: 123 QLISGVSYCHAMQVCHRDLKLENTLLDGSPAPRLKICAFG 162
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 71 LHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFYCAEVVLALDAIHCLGFVH 128
L + S +V+ YM GDL N + N ++ K + +V + + FVH
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 175
Query: 129 RDVKPDNMLLDKHGHLKLADFGTCMRM---------NKTGTETKRLGRNGIEEIKAHPFF 179
RD+ N +LD+ +K+ADFG M NKTG + + +E ++ F
Sbjct: 176 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP-VKWMALESLQTQKFT 234
Query: 180 I-NDQWTFSNL 189
+D W+F L
Sbjct: 235 TKSDVWSFGVL 245
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 13/78 (16%)
Query: 80 SLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDA-------IHCLGFVHRDVK 132
S+Y+V D+ DL L+SN V KF +E+ + IH +HRD+K
Sbjct: 99 SIYLVFDFCEH-DLAGLLSNVLV-----KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMK 152
Query: 133 PDNMLLDKHGHLKLADFG 150
N+L+ + G LKLADFG
Sbjct: 153 AANVLITRDGVLKLADFG 170
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 71 LHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFYCAEVVLALDAIHCLGFVH 128
L + S +V+ YM GDL N + N ++ K + +V + + FVH
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 153
Query: 129 RDVKPDNMLLDKHGHLKLADFGTCMRM---------NKTGTETKRLGRNGIEEIKAHPFF 179
RD+ N +LD+ +K+ADFG M NKTG + + +E ++ F
Sbjct: 154 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP-VKWMALESLQTQKFT 212
Query: 180 I-NDQWTFSNL 189
+D W+F L
Sbjct: 213 TKSDVWSFGVL 223
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 71 LHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFYCAEVVLALDAIHCLGFVH 128
L + S +V+ YM GDL N + N ++ K + +V + + FVH
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 174
Query: 129 RDVKPDNMLLDKHGHLKLADFGTCMRM---------NKTGTETKRLGRNGIEEIKAHPFF 179
RD+ N +LD+ +K+ADFG M NKTG + + +E ++ F
Sbjct: 175 RDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLP-VKWMALESLQTQKFT 233
Query: 180 I-NDQWTFSNL 189
+D W+F L
Sbjct: 234 TKSDVWSFGVL 244
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 71 LHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFYCAEVVLALDAIHCLGFVH 128
L + S +V+ YM GDL N + N ++ K + +V + + FVH
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKYLASKKFVH 155
Query: 129 RDVKPDNMLLDKHGHLKLADFGTCMRM---------NKTGTETKRLGRNGIEEIKAHPFF 179
RD+ N +LD+ +K+ADFG M NKTG + + +E ++ F
Sbjct: 156 RDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLP-VKWMALESLQTQKFT 214
Query: 180 I-NDQWTFSNL 189
+D W+F L
Sbjct: 215 TKSDVWSFGVL 225
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 46 KRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM--SNYDVP 103
+++D+ E IM ++ +IV+L Q A++L +VM+ GG L + ++P
Sbjct: 376 EKADTEEMMREAQIMHQLDNPYIVRLIGVCQ-AEALMLVMEMAGGGPLHKFLVGKREEIP 434
Query: 104 EKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+V + + + FVHR++ N+LL + K++DFG
Sbjct: 435 VSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFG 481
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 71 LHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFYCAEVVLALDAIHCLGFVH 128
L + S +V+ YM GDL N + N ++ K + +V + + FVH
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 215
Query: 129 RDVKPDNMLLDKHGHLKLADFGTCMRM---------NKTGTETKRLGRNGIEEIKAHPFF 179
RD+ N +LD+ +K+ADFG M NKTG + + +E ++ F
Sbjct: 216 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP-VKWMALESLQTQKFT 274
Query: 180 I-NDQWTFSNL 189
+D W+F L
Sbjct: 275 TKSDVWSFGVL 285
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 13/78 (16%)
Query: 80 SLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDA-------IHCLGFVHRDVK 132
S+Y+V D+ DL L+SN V KF +E+ + IH +HRD+K
Sbjct: 99 SIYLVFDFCEH-DLAGLLSNVLV-----KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMK 152
Query: 133 PDNMLLDKHGHLKLADFG 150
N+L+ + G LKLADFG
Sbjct: 153 AANVLITRDGVLKLADFG 170
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 71 LHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFYCAEVVLALDAIHCLGFVH 128
L + S +V+ YM GDL N + N ++ K + +V + + FVH
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 156
Query: 129 RDVKPDNMLLDKHGHLKLADFGTCMRM---------NKTGTETKRLGRNGIEEIKAHPFF 179
RD+ N +LD+ +K+ADFG M NKTG + + +E ++ F
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP-VKWMALESLQTQKFT 215
Query: 180 I-NDQWTFSNL 189
+D W+F L
Sbjct: 216 TKSDVWSFGVL 226
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 71 LHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFYCAEVVLALDAIHCLGFVH 128
L + S +V+ YM GDL N + N ++ K + +V + + FVH
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 157
Query: 129 RDVKPDNMLLDKHGHLKLADFGTCMRM---------NKTGTETKRLGRNGIEEIKAHPFF 179
RD+ N +LD+ +K+ADFG M NKTG + + +E ++ F
Sbjct: 158 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP-VKWMALESLQTQKFT 216
Query: 180 I-NDQWTFSNL 189
+D W+F L
Sbjct: 217 TKSDVWSFGVL 227
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 79/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y+++++M G+L++ + + E A +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 179
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 239
Query: 219 E 219
E
Sbjct: 240 E 240
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 71 LHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFYCAEVVLALDAIHCLGFVH 128
L + S +V+ YM GDL N + N ++ K + +V + + FVH
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 154
Query: 129 RDVKPDNMLLDKHGHLKLADFGTCMRM---------NKTGTETKRLGRNGIEEIKAHPFF 179
RD+ N +LD+ +K+ADFG M NKTG + + +E ++ F
Sbjct: 155 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP-VKWMALESLQTQKFT 213
Query: 180 I-NDQWTFSNL 189
+D W+F L
Sbjct: 214 TKSDVWSFGVL 224
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 71 LHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFYCAEVVLALDAIHCLGFVH 128
L + S +V+ YM GDL N + N ++ K + +V + + FVH
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 156
Query: 129 RDVKPDNMLLDKHGHLKLADFGTCMRM---------NKTGTETKRLGRNGIEEIKAHPFF 179
RD+ N +LD+ +K+ADFG M NKTG + + +E ++ F
Sbjct: 157 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP-VKWMALESLQTQKFT 215
Query: 180 I-NDQWTFSNL 189
+D W+F L
Sbjct: 216 TKSDVWSFGVL 226
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 5/138 (3%)
Query: 15 RQKYSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFA 74
R + EV F L+ TL A+ S + A F +E I+ + IV+L
Sbjct: 124 RGNFGEV---FSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 75 FQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY--CAEVVLALDAIHCLGFVHRDVK 132
+ +Y+VM+ + GGD + + + + ++ + +HRD+
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLA 240
Query: 133 PDNMLLDKHGHLKLADFG 150
N L+ + LK++DFG
Sbjct: 241 ARNCLVTEKNVLKISDFG 258
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 12/147 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAKF 109
F E ++M + +V+L +A + +Y++ +YM G LV+ + S +
Sbjct: 51 FLAEANLMKQLQHQRLVRL-YAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLD 109
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
A++ + I ++HR+++ N+L+ K+ADFG R+ + T R G
Sbjct: 110 MAAQIAEGMAFIEERNYIHRNLRAANILVSDTLSCKIADFGLA-RLIEDNEYTAREGAKF 168
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNL 189
E I F I +D W+F L
Sbjct: 169 PIKWTAPEAINYGTFTIKSDVWSFGIL 195
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 40.4 bits (93), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 71 LHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFYCAEVVLALDAIHCLGFVH 128
L + S +V+ YM GDL N + N ++ K + +V + + FVH
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 157
Query: 129 RDVKPDNMLLDKHGHLKLADFGTCMRM---------NKTGTETKRLGRNGIEEIKAHPFF 179
RD+ N +LD+ +K+ADFG M NKTG + + +E ++ F
Sbjct: 158 RDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLP-VKWMALESLQTQKFT 216
Query: 180 I-NDQWTFSNL 189
+D W+F L
Sbjct: 217 TKSDVWSFGVL 227
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 13/131 (9%)
Query: 71 LHFAFQDAKSLYMVMDYMPGGDLVNLMSN--YDVPEKWAKFYCAEVVLALDAIHCLGFVH 128
L + S +V+ YM GDL N + N ++ K + +V + + FVH
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVH 161
Query: 129 RDVKPDNMLLDKHGHLKLADFGTCMRM---------NKTGTETKRLGRNGIEEIKAHPFF 179
RD+ N +LD+ +K+ADFG M NKTG + + +E ++ F
Sbjct: 162 RDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLP-VKWMALESLQTQKFT 220
Query: 180 I-NDQWTFSNL 189
+D W+F L
Sbjct: 221 TKSDVWSFGVL 231
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 51/109 (46%), Gaps = 9/109 (8%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS-----NYDVPEKWAKFY 110
E ++ E +V L + K Y+V +++ L +L +Y V +K Y
Sbjct: 74 EIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQK----Y 129
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTG 159
+++ + H +HRD+KP+N+L+ + G +KL DFG + G
Sbjct: 130 LFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Query: 48 SDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWA 107
S+ FF E + +M ++ + +V+ + +Y+V +Y+ G L+N + ++ + +
Sbjct: 46 SEDEFFQEAQTMMKLSHPK-LVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPS 104
Query: 108 KFY--CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ C +V + + F+HRD+ N L+D+ +K++DFG
Sbjct: 105 QLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFG 149
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 58/138 (42%), Gaps = 5/138 (3%)
Query: 15 RQKYSEVPRLFEYLLKYRYTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFA 74
R + EV F L+ TL A+ S + A F +E I+ + IV+L
Sbjct: 124 RGNFGEV---FSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 75 FQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY--CAEVVLALDAIHCLGFVHRDVK 132
+ +Y+VM+ + GGD + + + + ++ + +HRD+
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLA 240
Query: 133 PDNMLLDKHGHLKLADFG 150
N L+ + LK++DFG
Sbjct: 241 ARNCLVTEKNVLKISDFG 258
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y++ ++M G+L++ + + E A +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTXTAHAGAKF 179
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 239
Query: 219 E 219
E
Sbjct: 240 E 240
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 51/111 (45%), Gaps = 1/111 (0%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEV 114
E I ++ +V H F+D +Y+V++ L+ L V E A+++ +
Sbjct: 76 EIAIHKSLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQT 135
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRL 165
+ + +H +HRD+K N+ L+ +K+ DFG ++ G K L
Sbjct: 136 IQGVQYLHNNRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL 186
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y++ ++M G+L++ + + E A +
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 115
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 174
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 234
Query: 219 E 219
E
Sbjct: 235 E 235
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 38/73 (52%), Gaps = 4/73 (5%)
Query: 82 YMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
Y+V + M GG +++ + E A +V ALD +H G HRD+KP+N+L +
Sbjct: 87 YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEH 146
Query: 141 HGH---LKLADFG 150
+K+ DFG
Sbjct: 147 PNQVSPVKICDFG 159
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y++ ++M G+L++ + + E A +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 120
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 179
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 239
Query: 219 E 219
E
Sbjct: 240 E 240
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLGF 126
+V H F+D +Y+V++ L+ L V E A+++ + + + +H
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 163
Query: 127 VHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRL 165
+HRD+K N+ L+ +K+ DFG ++ G K L
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTL 202
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E +I+ + IV+ A ++L ++M+Y+P G L + + + K
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLL 120
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMNKTGTETKRLG 166
Y +++ ++ + ++HRD+ N+L++ +K+ DFG + +K + K G
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 167 RNGI-----EEIKAHPFFI-NDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEE 220
+ I E + F + +D W+F V+ EL F IEK +SP
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFG-------VVLYEL--------FTYIEKSKSPPA 225
Query: 221 NF 222
F
Sbjct: 226 EF 227
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y++ ++M G+L++ + + E A +
Sbjct: 54 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 113
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 114 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTFTAHAGAKF 172
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 173 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEKDYRMERP 232
Query: 219 E 219
E
Sbjct: 233 E 233
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y++ ++M G+L++ + + E A +
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 115
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 174
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 234
Query: 219 E 219
E
Sbjct: 235 E 235
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLGF 126
+V H F+D +Y+V++ L+ L V E A+++ + + + +H
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 163
Query: 127 VHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRL 165
+HRD+K N+ L+ +K+ DFG ++ G K L
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXL 202
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 114 VVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGT 151
+ L+AIH G+ HRD+KP N+LL G L D G+
Sbjct: 143 ICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGS 180
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y++ ++M G+L++ + + E A +
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 115
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 174
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 234
Query: 219 E 219
E
Sbjct: 235 E 235
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y++ ++M G+L++ + + E A +
Sbjct: 56 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 115
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 116 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 174
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 175 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 234
Query: 219 E 219
E
Sbjct: 235 E 235
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++M MP G L++ + + ++ ++ +C
Sbjct: 70 DEAYVMASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 128
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETK 163
++ ++ + VHRD+ N+L+ H+K+ DFG R G E K
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG---RAKLLGAEEK 176
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++M MP G L++ + + ++ ++ +C
Sbjct: 68 DEAYVMASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETK 163
++ ++ + VHRD+ N+L+ H+K+ DFG R G E K
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG---RAKLLGAEEK 174
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y++ ++M G+L++ + + E A +
Sbjct: 69 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 128
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 129 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 187
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 188 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 247
Query: 219 E 219
E
Sbjct: 248 E 248
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 15/124 (12%)
Query: 34 TLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL 93
+ L + Y +R D F E IM + I+ L K + ++ +YM G L
Sbjct: 46 AIKTLKAGYTDKQRRD---FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL 102
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKL 146
+ D +F ++V L I + +VHRD+ N+L++ + K+
Sbjct: 103 DAFLRKND-----GRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKV 157
Query: 147 ADFG 150
+DFG
Sbjct: 158 SDFG 161
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y++ ++M G+L++ + + E A +
Sbjct: 60 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 119
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 120 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 178
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 179 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 238
Query: 219 E 219
E
Sbjct: 239 E 239
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y++ ++M G+L++ + + E A +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 179
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 239
Query: 219 E 219
E
Sbjct: 240 E 240
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 15/124 (12%)
Query: 34 TLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL 93
+ L + Y +R D F E IM + I+ L K + ++ +YM G L
Sbjct: 40 AIKTLKAGYTDKQRRD---FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL 96
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKL 146
+ D +F ++V L I + +VHRD+ N+L++ + K+
Sbjct: 97 DAFLRKND-----GRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNSNLVCKV 151
Query: 147 ADFG 150
+DFG
Sbjct: 152 SDFG 155
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 54/111 (48%), Gaps = 6/111 (5%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++M MP G L++ + + ++ ++ +C
Sbjct: 68 DEAYVMASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETK 163
++ ++ + VHRD+ N+L+ H+K+ DFG R G E K
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG---RAKLLGAEEK 174
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 55/124 (44%), Gaps = 15/124 (12%)
Query: 34 TLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL 93
+ L + Y + +R D F E IM + I++L K + ++ +YM G L
Sbjct: 77 AIKTLKAGYTEKQRVD---FLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGAL 133
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKL 146
+ EK +F ++V L I + +VHRD+ N+L++ + K+
Sbjct: 134 DKFLR-----EKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKV 188
Query: 147 ADFG 150
+DFG
Sbjct: 189 SDFG 192
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 1/99 (1%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALDAIHCLGF 126
+V H F+D +Y+V++ L+ L V E A+++ + + + +H
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 163
Query: 127 VHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRL 165
+HRD+K N+ L+ +K+ DFG ++ G K L
Sbjct: 164 IHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDL 202
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y++ ++M G+L++ + + E A +
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 117
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 176
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 236
Query: 219 E 219
E
Sbjct: 237 E 237
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 25/145 (17%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF-----------------Y 110
I+ L A + LY+ ++Y P G+L++ + V E F +
Sbjct: 78 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 137
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR--- 167
A+V +D + F+HRD+ N+L+ ++ K+ADFG + + K +GR
Sbjct: 138 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFG--LSRGQEVYVKKTMGRLPV 195
Query: 168 --NGIEEIKAHPFFIN-DQWTFSNL 189
IE + + N D W++ L
Sbjct: 196 RWMAIESLNYSVYTTNSDVWSYGVL 220
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 50/102 (49%), Gaps = 4/102 (3%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E +I+ + IV+ A ++L ++M+Y+P G L + + + K
Sbjct: 58 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 117
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
Y +++ ++ + ++HRD+ N+L++ +K+ DFG
Sbjct: 118 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFG 159
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 39/78 (50%), Gaps = 6/78 (7%)
Query: 79 KSLYMVMDYMPGGDLVNLMSNYD---VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
K L +V + + GG+L + + + E+ A + A+ +H + HRDVKP+N
Sbjct: 132 KCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPEN 191
Query: 136 MLLDK---HGHLKLADFG 150
+L + LKL DFG
Sbjct: 192 LLYTSKRPNAILKLTDFG 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y++ ++M G+L++ + + E A +
Sbjct: 61 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 179
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 180 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 239
Query: 219 E 219
E
Sbjct: 240 E 240
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y++ ++M G+L++ + + E A +
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 117
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 176
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 236
Query: 219 E 219
E
Sbjct: 237 E 237
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 25/145 (17%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF-----------------Y 110
I+ L A + LY+ ++Y P G+L++ + V E F +
Sbjct: 88 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 147
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR--- 167
A+V +D + F+HRD+ N+L+ ++ K+ADFG + + K +GR
Sbjct: 148 AADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFG--LSRGQEVYVKKTMGRLPV 205
Query: 168 --NGIEEIKAHPFFIN-DQWTFSNL 189
IE + + N D W++ L
Sbjct: 206 RWMAIESLNYSVYTTNSDVWSYGVL 230
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++M MP G L++ + + ++ ++ +C
Sbjct: 67 DEAYVMASVDNPHVCRL-LGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCV 125
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 163
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 6/81 (7%)
Query: 82 YMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
Y+V + M GG +++ + E A +V ALD +H G HRD+KP+N+L +
Sbjct: 87 YLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEH 146
Query: 141 HGH---LKLADF--GTCMRMN 156
+K+ DF G+ +++N
Sbjct: 147 PNQVSPVKICDFDLGSGIKLN 167
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y++ ++M G+L++ + + E A +
Sbjct: 57 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 116
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 117 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKF 175
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 176 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 235
Query: 219 E 219
E
Sbjct: 236 E 236
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 78/182 (42%), Gaps = 27/182 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E +I+ + IV+ A ++L ++M+++P G L + + K
Sbjct: 61 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLL 120
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMNKTGTETKRLG 166
Y +++ ++ + ++HRD+ N+L++ +K+ DFG + +K + K G
Sbjct: 121 QYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPG 180
Query: 167 RNGI-----EEIKAHPFFI-NDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEE 220
+ I E + F + +D W+F V+ EL F IEK +SP
Sbjct: 181 ESPIFWYAPESLTESKFSVASDVWSFG-------VVLYEL--------FTYIEKSKSPPA 225
Query: 221 NF 222
F
Sbjct: 226 EF 227
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y++ ++M G+L++ + + E A +
Sbjct: 58 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 117
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HRD+ N L+ ++ +K+ADFG R+ T T G
Sbjct: 118 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAPAGAKF 176
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 177 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 236
Query: 219 E 219
E
Sbjct: 237 E 237
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/124 (22%), Positives = 54/124 (43%), Gaps = 15/124 (12%)
Query: 34 TLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL 93
+ L S Y + +R D F E IM + ++ L + + ++ ++M G L
Sbjct: 65 AIKTLKSGYTEKQRRD---FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL 121
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKL 146
+ + D +F ++V L I + +VHRD+ N+L++ + K+
Sbjct: 122 DSFLRQND-----GQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKV 176
Query: 147 ADFG 150
+DFG
Sbjct: 177 SDFG 180
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
Query: 72 HFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD---VPEKWAKFYCAEVVLALDAIH--CLG 125
HF + +++VM + + G +L+ L+ Y+ +P + K +++L LD +H C G
Sbjct: 94 HFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC-G 152
Query: 126 FVHRDVKPDNMLL------DKHGHLKLADFGTC 152
+H D+KP+N+L+ + +K+AD G
Sbjct: 153 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 4/89 (4%)
Query: 81 LYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVL----ALDAIHCLGFVHRDVKPDNM 136
LY+ M +L + M+ E+ + C + L A++ +H G +HRD+KP N+
Sbjct: 90 LYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNI 149
Query: 137 LLDKHGHLKLADFGTCMRMNKTGTETKRL 165
+K+ DFG M++ E L
Sbjct: 150 FFTMDDVVKVGDFGLVTAMDQDEEEQTVL 178
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 13/93 (13%)
Query: 72 HFAFQDAKSLYMVMDY-MPGGDLVNLMSNYD---VPEKWAKFYCAEVVLALDAIH--CLG 125
HF + +++VM + + G +L+ L+ Y+ +P + K +++L LD +H C G
Sbjct: 94 HFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRC-G 152
Query: 126 FVHRDVKPDNMLL------DKHGHLKLADFGTC 152
+H D+KP+N+L+ + +K+AD G
Sbjct: 153 IIHTDIKPENVLMEIVDSPENLIQIKIADLGNA 185
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 44/95 (46%), Gaps = 3/95 (3%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFV 127
++ + + F+ + + M Y+ ++++++ E + Y + AL IH G V
Sbjct: 82 VMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQE--VREYMLNLFKALKRIHQFGIV 139
Query: 128 HRDVKPDNMLLDKH-GHLKLADFGTCMRMNKTGTE 161
HRDVKP N L ++ L DFG + T E
Sbjct: 140 HRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIE 174
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++M MP G L++ + + ++ ++ +C
Sbjct: 67 DEAYVMASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 125
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 126 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 163
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++M MP G L++ + + ++ ++ +C
Sbjct: 70 DEAYVMASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 128
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 129 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 166
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++M MP G L++ + + ++ ++ +C
Sbjct: 68 DEAYVMASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 164
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++M MP G L++ + + ++ ++ +C
Sbjct: 73 DEAYVMASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 169
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++M MP G L++ + + ++ ++ +C
Sbjct: 66 DEAYVMASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 162
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/98 (21%), Positives = 50/98 (51%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++M MP G L++ + + ++ ++ +C
Sbjct: 69 DEAYVMASVDNPHVCRL-LGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 165
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 71 LHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDV--PEKWAKFYCAEVVLALDAIHCLGFVH 128
+HF LY+V + M DL ++ + + + +++ ++L L +H G VH
Sbjct: 99 VHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVH 157
Query: 129 RDVKPDNMLLDKHGHLKLADFGTCMR----MNKTGTETKR 164
RD+ P N+LL + + + DF NKT T R
Sbjct: 158 RDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR 197
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 7/100 (7%)
Query: 71 LHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDV--PEKWAKFYCAEVVLALDAIHCLGFVH 128
+HF LY+V + M DL ++ + + + +++ ++L L +H G VH
Sbjct: 99 VHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFMYHILLGLHVLHEAGVVH 157
Query: 129 RDVKPDNMLLDKHGHLKLADFGTCMR----MNKTGTETKR 164
RD+ P N+LL + + + DF NKT T R
Sbjct: 158 RDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHR 197
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 15/124 (12%)
Query: 34 TLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL 93
+ L + Y +R D F E IM + I+ L K + ++ +YM G L
Sbjct: 61 AIKTLKAGYTDKQRRD---FLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSL 117
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKL 146
+ D +F ++V L I + VHRD+ N+L++ + K+
Sbjct: 118 DAFLRKND-----GRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNSNLVCKV 172
Query: 147 ADFG 150
+DFG
Sbjct: 173 SDFG 176
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLL---DKHGHLK--LADFGTCMRM 155
+ L +H L VHRD+KP N+L+ + HG +K ++DFG C ++
Sbjct: 126 QTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKL 173
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEV 114
E ++M ++ +IV++ +A+S +VM+ G L L N V +K +V
Sbjct: 420 EANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 478
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ + + FVHRD+ N+LL + K++DFG
Sbjct: 479 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFG 514
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEV 114
E ++M ++ +IV++ +A+S +VM+ G L L N V +K +V
Sbjct: 421 EANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 479
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ + + FVHRD+ N+LL + K++DFG
Sbjct: 480 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFG 515
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y++ ++M G+L++ + + E A +
Sbjct: 263 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 322
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HR++ N L+ ++ +K+ADFG R+ T T G
Sbjct: 323 MATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 381
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 382 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 441
Query: 219 E 219
E
Sbjct: 442 E 442
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 79/182 (43%), Gaps = 27/182 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDA--KSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF- 109
F E +I+ + IV+ A ++L ++M+Y+P G L + + + K
Sbjct: 59 FEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL 118
Query: 110 -YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG--TCMRMNKTGTETKRLG 166
Y +++ ++ + ++HR++ N+L++ +K+ DFG + +K + K G
Sbjct: 119 QYTSQICKGMEYLGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPG 178
Query: 167 RNGI-----EEIKAHPFFI-NDQWTFSNLRECVPPVVPELSGDDDTSNFDDIEKDESPEE 220
+ I E + F + +D W+F V+ EL F IEK +SP
Sbjct: 179 ESPIFWYAPESLTESKFSVASDVWSFG-------VVLYEL--------FTYIEKSKSPPA 223
Query: 221 NF 222
F
Sbjct: 224 EF 225
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 60 MAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAE--VVLA 117
+ H N+ +Q + + ++VM+Y G +L+ + P + + +
Sbjct: 111 LRHPNT---IQYRGCYLREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQG 166
Query: 118 LDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
L +H +HRDVK N+LL + G +KL DFG+ M
Sbjct: 167 LAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 204
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Query: 60 MAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAE--VVLA 117
+ H N+ +Q + + ++VM+Y G +L+ + P + + +
Sbjct: 72 LRHPNT---IQYRGCYLREHTAWLVMEYCLGS-ASDLLEVHKKPLQEVEIAAVTHGALQG 127
Query: 118 LDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
L +H +HRDVK N+LL + G +KL DFG+ M
Sbjct: 128 LAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM 165
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 38.1 bits (87), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Query: 78 AKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAE----VVLALDAIHCLGFVHRDVKP 133
K L++ M++ G L + EK K E + +D IH ++RD+KP
Sbjct: 92 TKCLFIQMEFCDKGTLEQWIEKRR-GEKLDKVLALELFEQITKGVDYIHSKKLINRDLKP 150
Query: 134 DNMLLDKHGHLKLADFGTCMRMNKTGTETKRLG 166
N+ L +K+ DFG + G + G
Sbjct: 151 SNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKG 183
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 58/115 (50%), Gaps = 19/115 (16%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCA 112
F E IM++ N IV+L+ + MVM+++P GDL + + + P KW+
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWS----V 123
Query: 113 EVVLALDAIHCLGF--------VHRDVKPDNML---LDKHGHL--KLADFGTCMR 154
++ L LD + + VHRD++ N+ LD++ + K+ADFGT +
Sbjct: 124 KLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ 178
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEV 114
E ++M ++ +IV++ +A+S +VM+ G L L N V +K +V
Sbjct: 78 EANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 136
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ + + FVHRD+ N+LL + K++DFG
Sbjct: 137 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFG 172
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEV 114
E ++M ++ +IV++ +A+S +VM+ G L L N V +K +V
Sbjct: 78 EANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 136
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ + + FVHRD+ N+LL + K++DFG
Sbjct: 137 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFG 172
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y++ ++M G+L++ + + E A +
Sbjct: 302 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 361
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HR++ N L+ ++ +K+ADFG R+ T T G
Sbjct: 362 MATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 420
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 421 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 480
Query: 219 E 219
E
Sbjct: 481 E 481
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 78/181 (43%), Gaps = 15/181 (8%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAK---F 109
F +E +M +VQL Y++ ++M G+L++ + + E A +
Sbjct: 260 FLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 319
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR-- 167
++ A++ + F+HR++ N L+ ++ +K+ADFG R+ T T G
Sbjct: 320 MATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLS-RLMTGDTYTAHAGAKF 378
Query: 168 ----NGIEEIKAHPFFI-NDQWTFSNLR-ECVPPVVPELSGDDDTSNFDDIEKD---ESP 218
E + + F I +D W F L E + G D + ++ +EKD E P
Sbjct: 379 PIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERP 438
Query: 219 E 219
E
Sbjct: 439 E 439
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 61/139 (43%), Gaps = 16/139 (11%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL----------VNLMSNYDV 102
F E +++ + E IV+ + + L MV +YM GDL LM+ +
Sbjct: 62 FHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNP 121
Query: 103 PEKWAKFYCAEVVLALDA----IHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKT 158
P + + + + A + FVHRD+ N L+ ++ +K+ DFG M +
Sbjct: 122 PTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFG--MSRDVY 179
Query: 159 GTETKRLGRNGIEEIKAHP 177
T+ R+G + + I+ P
Sbjct: 180 STDYYRVGGHTMLPIRWMP 198
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 22/155 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNL-------MSNYDV--P 103
F E +M N +V+L + ++M+ M GDL + M N V P
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 104 EKWAKFY--CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+K E+ + ++ FVHRD+ N ++ + +K+ DFG M + T+
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIXETD 186
Query: 162 TKRLGRNGI--------EEIKAHPFFI-NDQWTFS 187
R G G+ E +K F +D W+F
Sbjct: 187 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 221
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEV 114
E ++M ++ +IV++ +A+S +VM+ G L L N V +K +V
Sbjct: 76 EANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 134
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ + + FVHRD+ N+LL + K++DFG
Sbjct: 135 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFG 170
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 17/100 (17%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF-----------------Y 110
I+ L A + LY+ ++Y P G+L++ + V E F +
Sbjct: 85 IINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHF 144
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
A+V +D + F+HR++ N+L+ ++ K+ADFG
Sbjct: 145 AADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFG 184
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 22/155 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNL-------MSNYDV--P 103
F E +M N +V+L + ++M+ M GDL + M N V P
Sbjct: 60 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 119
Query: 104 EKWAKFY--CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+K E+ + ++ FVHRD+ N ++ + +K+ DFG M + T+
Sbjct: 120 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIXETD 177
Query: 162 TKRLGRNGI--------EEIKAHPFFI-NDQWTFS 187
R G G+ E +K F +D W+F
Sbjct: 178 XXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 212
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEV 114
E ++M ++ +IV++ +A+S +VM+ G L L N V +K +V
Sbjct: 68 EANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 126
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ + + FVHRD+ N+LL + K++DFG
Sbjct: 127 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFG 162
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEV 114
E ++M ++ +IV++ +A+S +VM+ G L L N V +K +V
Sbjct: 62 EANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 120
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ + + FVHRD+ N+LL + K++DFG
Sbjct: 121 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFG 156
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++ MP G L++ + + ++ ++ +C
Sbjct: 68 DEAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETK 163
++ ++ + VHRD+ N+L+ H+K+ DFG R G E K
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG---RAKLLGAEEK 174
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEV 114
E ++M ++ +IV++ +A+S +VM+ G L L N V +K +V
Sbjct: 62 EANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 120
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ + + FVHRD+ N+LL + K++DFG
Sbjct: 121 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFG 156
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++ MP G L++ + + ++ ++ +C
Sbjct: 66 DEAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETK 163
++ ++ + VHRD+ N+L+ H+K+ DFG R G E K
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG---RAKLLGAEEK 172
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEV 114
E ++M ++ +IV++ +A+S +VM+ G L L N V +K +V
Sbjct: 58 EANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 116
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ + + FVHRD+ N+LL + K++DFG
Sbjct: 117 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFG 152
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 2/96 (2%)
Query: 56 ERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-LMSNYDVPEKWAKFYCAEV 114
E ++M ++ +IV++ +A+S +VM+ G L L N V +K +V
Sbjct: 56 EANVMQQLDNPYIVRM-IGICEAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELVHQV 114
Query: 115 VLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ + + FVHRD+ N+LL + K++DFG
Sbjct: 115 SMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFG 150
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++ MP G L++ + + ++ ++ +C
Sbjct: 73 DEAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETK 163
++ ++ + VHRD+ N+L+ H+K+ DFG R G E K
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG---RAKLLGAEEK 179
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 66 EWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLG 125
E V L A D K L+ Y+ + L+ N V K+ +H G
Sbjct: 131 ELYVVLEIADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKY--------------VHSAG 176
Query: 126 FVHRDVKPDNMLLDKHGHLKLADFG 150
+HRD+KP N L+++ +K+ DFG
Sbjct: 177 ILHRDLKPANCLVNQDCSVKVCDFG 201
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 78 AKSLYMVMDYMPGGDLVNLM--SNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
+ ++M+++P G L + + + K Y ++ +D + +VHRD+ N
Sbjct: 97 GNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARN 156
Query: 136 MLLDKHGHLKLADFG 150
+L++ +K+ DFG
Sbjct: 157 VLVESEHQVKIGDFG 171
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 37.4 bits (85), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/75 (22%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 78 AKSLYMVMDYMPGGDLVNLM--SNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDN 135
+ ++M+++P G L + + + K Y ++ +D + +VHRD+ N
Sbjct: 85 GNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARN 144
Query: 136 MLLDKHGHLKLADFG 150
+L++ +K+ DFG
Sbjct: 145 VLVESEHQVKIGDFG 159
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFY 110
F +E IMA + +V+L + ++ +V MP G L+ + + ++ + +
Sbjct: 87 FMDEALIMASMDHPHLVRL-LGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW 145
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
C ++ + + VHRD+ N+L+ H+K+ DFG
Sbjct: 146 CVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFG 185
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 37.0 bits (84), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 108 KFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD 139
K YC E++ AL+ + + H D+KP+N+LLD
Sbjct: 140 KLYCIEILKALNYLRKMSLTHTDLKPENILLD 171
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFY 110
F +E IMA + +V+L + ++ +V MP G L+ + + ++ + +
Sbjct: 64 FMDEALIMASMDHPHLVRL-LGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNW 122
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
C ++ + + VHRD+ N+L+ H+K+ DFG
Sbjct: 123 CVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFG 162
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++ MP G L++ + + ++ ++ +C
Sbjct: 66 DEAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCV 124
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 162
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 37.0 bits (84), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 15/124 (12%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCA 112
F E IM I++L ++ + ++ ++M G L + + D +F
Sbjct: 64 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLND-----GQFTVI 118
Query: 113 EVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTG---TET 162
++V L I + +VHRD+ N+L++ + K++DFG + + TET
Sbjct: 119 QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTET 178
Query: 163 KRLG 166
LG
Sbjct: 179 SSLG 182
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 36.6 bits (83), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRL 165
++ A++ +H G +HRD+KP N+ +K+ DFG M++ E L
Sbjct: 172 QIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVL 224
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++ MP G L++ + + ++ ++ +C
Sbjct: 91 DEAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 149
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 150 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 187
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 22/155 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-------LMSNYDV--P 103
F E +M N +V+L + ++M+ M GDL + M+N V P
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 134
Query: 104 EKWAKFY--CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+K E+ + ++ FVHRD+ N ++ + +K+ DFG M + T+
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYETD 192
Query: 162 TKRLGRNGI--------EEIKAHPFFI-NDQWTFS 187
R G G+ E +K F +D W+F
Sbjct: 193 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 227
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++ MP G L++ + + ++ ++ +C
Sbjct: 100 DEAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 158
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 159 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 196
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++ MP G L++ + + ++ ++ +C
Sbjct: 76 DEAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 134
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 135 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 172
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++ MP G L++ + + ++ ++ +C
Sbjct: 66 DEAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 162
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++ MP G L++ + + ++ ++ +C
Sbjct: 68 DEAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 126
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 127 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 164
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 60/142 (42%), Gaps = 19/142 (13%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--------DVPE 104
F E +++ + E IV+ + D L MV +YM GDL + + D
Sbjct: 64 FQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQP 123
Query: 105 KWAK---------FYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRM 155
+ AK +++ + + FVHRD+ N L+ + +K+ DFG M
Sbjct: 124 RQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFG--MSR 181
Query: 156 NKTGTETKRLGRNGIEEIKAHP 177
+ T+ R+G + + I+ P
Sbjct: 182 DVYSTDYYRVGGHTMLPIRWMP 203
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++ MP G L++ + + ++ ++ +C
Sbjct: 60 DEAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 118
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 119 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 156
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 126 FVHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
+HRD+K +N+LL G +KL DFG+ ++
Sbjct: 159 IIHRDLKVENLLLSNQGTIKLCDFGSATTIS 189
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 36.6 bits (83), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++ MP G L++ + + ++ ++ +C
Sbjct: 66 DEAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 162
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++ MP G L++ + + ++ ++ +C
Sbjct: 69 DEAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 165
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++ MP G L++ + + ++ ++ +C
Sbjct: 73 DEAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 169
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++ MP G L++ + + ++ ++ +C
Sbjct: 69 DEAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 165
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 36.6 bits (83), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCA 112
F EE ++M + +VQL+ + + +V ++M G L S+Y ++ + A
Sbjct: 49 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL----SDYLRTQR--GLFAA 102
Query: 113 EVVLALDAIHCLGF--------VHRDVKPDNMLLDKHGHLKLADFG 150
E +L + C G +HRD+ N L+ ++ +K++DFG
Sbjct: 103 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG 148
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCA 112
F EE ++M + +VQL+ + + +V ++M G L S+Y ++ + A
Sbjct: 47 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL----SDYLRTQR--GLFAA 100
Query: 113 EVVLALDAIHCLGF--------VHRDVKPDNMLLDKHGHLKLADFG 150
E +L + C G +HRD+ N L+ ++ +K++DFG
Sbjct: 101 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG 146
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 18/141 (12%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY-----------D 101
F E +++ + IV+ + + L MV +YM GDL + ++ D
Sbjct: 67 FQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 126
Query: 102 V---PEKWAKFYCAEVVLALDAIHCLG--FVHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
V P + +A ++ G FVHRD+ N L+ + +K+ DFG M +
Sbjct: 127 VAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG--MSRD 184
Query: 157 KTGTETKRLGRNGIEEIKAHP 177
T+ R+G + I+ P
Sbjct: 185 IYSTDYYRVGGRTMLPIRWMP 205
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++ MP G L++ + + ++ ++ +C
Sbjct: 73 DEAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 131
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 132 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 169
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++ MP G L++ + + ++ ++ +C
Sbjct: 69 DEAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 127
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 128 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 165
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++ MP G L++ + + ++ ++ +C
Sbjct: 66 DEAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 124
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 125 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 162
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 36.2 bits (82), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++ MP G L++ + + ++ ++ +C
Sbjct: 72 DEAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 130
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 131 QIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 168
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 18/141 (12%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY-----------D 101
F E +++ + IV+ + + L MV +YM GDL + ++ D
Sbjct: 61 FQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 120
Query: 102 V---PEKWAKFYCAEVVLALDAIHCLG--FVHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
V P + +A ++ G FVHRD+ N L+ + +K+ DFG M +
Sbjct: 121 VAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG--MSRD 178
Query: 157 KTGTETKRLGRNGIEEIKAHP 177
T+ R+G + I+ P
Sbjct: 179 IYSTDYYRVGGRTMLPIRWMP 199
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 18/141 (12%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY-----------D 101
F E +++ + IV+ + + L MV +YM GDL + ++ D
Sbjct: 90 FQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 149
Query: 102 V---PEKWAKFYCAEVVLALDAIHCLG--FVHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
V P + +A ++ G FVHRD+ N L+ + +K+ DFG M +
Sbjct: 150 VAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFG--MSRD 207
Query: 157 KTGTETKRLGRNGIEEIKAHP 177
T+ R+G + I+ P
Sbjct: 208 IYSTDYYRVGGRTMLPIRWMP 228
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 64/155 (41%), Gaps = 22/155 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVN-------LMSNYDV--P 103
F E +M N +V+L + ++M+ M GDL + M+N V P
Sbjct: 65 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAP 124
Query: 104 EKWAKFY--CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+K E+ + ++ FVHRD+ N ++ + +K+ DFG M + T+
Sbjct: 125 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYETD 182
Query: 162 TKRLGRNGI--------EEIKAHPFFI-NDQWTFS 187
R G G+ E +K F +D W+F
Sbjct: 183 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 217
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 47/100 (47%), Gaps = 4/100 (4%)
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGH--LKLADFG-TCMRMNKTGTETKRLG 166
+ ++ LDA+H +H D+KP+N+LL + G +K+ DFG +C + T +
Sbjct: 205 FAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF 264
Query: 167 RNGIEEIKAHPFFIN-DQWTFSNLRECVPPVVPELSGDDD 205
E I + + D W+ + + P L G+D+
Sbjct: 265 YRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDE 304
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCA 112
F EE ++M + +VQL+ + + +V ++M G L S+Y ++ + A
Sbjct: 52 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL----SDYLRTQR--GLFAA 105
Query: 113 EVVLALDAIHCLGF--------VHRDVKPDNMLLDKHGHLKLADFG 150
E +L + C G +HRD+ N L+ ++ +K++DFG
Sbjct: 106 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG 151
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCA 112
F EE ++M + +VQL+ + + +V ++M G L S+Y ++ + A
Sbjct: 50 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCL----SDYLRTQR--GLFAA 103
Query: 113 EVVLALDAIHCLGF--------VHRDVKPDNMLLDKHGHLKLADFG 150
E +L + C G +HRD+ N L+ ++ +K++DFG
Sbjct: 104 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG 149
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 36.2 bits (82), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCA 112
F EE ++M + +VQL+ + + +V ++M G L S+Y ++ + A
Sbjct: 49 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL----SDYLRTQR--GLFAA 102
Query: 113 EVVLALDAIHCLGF--------VHRDVKPDNMLLDKHGHLKLADFG 150
E +L + C G +HRD+ N L+ ++ +K++DFG
Sbjct: 103 ETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQVIKVSDFG 148
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 51/106 (48%), Gaps = 14/106 (13%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCA 112
F EE ++M + +VQL+ + + +V ++M G L S+Y ++ + A
Sbjct: 69 FIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCL----SDYLRTQR--GLFAA 122
Query: 113 EVVLALDAIHCLGF--------VHRDVKPDNMLLDKHGHLKLADFG 150
E +L + C G +HRD+ N L+ ++ +K++DFG
Sbjct: 123 ETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFG 168
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 36.2 bits (82), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 113 EVVLALDAIHCLGFVHRDVKPDNML--LDKHGHLK-LADFG 150
+++ ++ IH F+HRDVKPDN L L K G+L + DFG
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGH--LKLADFGT 151
+ ++ LDA+H +H D+KP+N+LL + G +K+ DFG+
Sbjct: 205 FAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGS 248
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 36.2 bits (82), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 28/44 (63%), Gaps = 2/44 (4%)
Query: 110 YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGH--LKLADFGT 151
+ ++ LDA+H +H D+KP+N+LL + G +K+ DFG+
Sbjct: 205 FAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGS 248
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 113 EVVLALDAIHCLGFVHRDVKPDNML--LDKHGHLK-LADFG 150
+++ ++ IH F+HRDVKPDN L L K G+L + DFG
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/130 (21%), Positives = 58/130 (44%), Gaps = 18/130 (13%)
Query: 40 SRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSN 99
S+ + R ++ F ++ H N I+ L +L +VM++ GG L ++S
Sbjct: 47 SQTIENVRQEAKLF----AMLKHPN---IIALRGVCLKEPNLCLVMEFARGGPLNRVLSG 99
Query: 100 YDVPEKWAKFYCAEVVLALDAIH---CLGFVHRDVKPDNMLLDK--------HGHLKLAD 148
+P + ++ ++ +H + +HRD+K N+L+ + + LK+ D
Sbjct: 100 KRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITD 159
Query: 149 FGTCMRMNKT 158
FG ++T
Sbjct: 160 FGLAREWHRT 169
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 36.2 bits (82), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/98 (20%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNY--DVPEKWAKFYCA 112
+E +MA ++ + +L ++ ++ MP G L++ + + ++ ++ +C
Sbjct: 63 DEAYVMASVDNPHVCRL-LGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCV 121
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ ++ + VHRD+ N+L+ H+K+ DFG
Sbjct: 122 QIAEGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFG 159
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 113 EVVLALDAIHCLGFVHRDVKPDNML--LDKHGHLK-LADFG 150
+++ ++ IH F+HRDVKPDN L L K G+L + DFG
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFG 151
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM----SNYDVPEKWAK 108
F E IM IV A +L +V +Y+ G L L+ + + E+
Sbjct: 81 FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 109 FYCAEVVLALDAIHCLG--FVHRDVKPDNMLLDKHGHLKLADFG 150
+V ++ +H VHRD+K N+L+DK +K+ DFG
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFG 184
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 35.8 bits (81), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/124 (21%), Positives = 53/124 (42%), Gaps = 15/124 (12%)
Query: 34 TLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL 93
+ L S Y + +R D F E IM + ++ L + + ++ ++M G L
Sbjct: 39 AIKTLKSGYTEKQRRD---FLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSL 95
Query: 94 VNLMSNYDVPEKWAKFYCAEVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKL 146
+ + D +F ++V L I + +VHR + N+L++ + K+
Sbjct: 96 DSFLRQND-----GQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNSNLVCKV 150
Query: 147 ADFG 150
+DFG
Sbjct: 151 SDFG 154
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 69 VQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY--CAEVVLALDAIHCLGF 126
+ L + A L +V + G L + + + + K + +D +H
Sbjct: 82 ILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 141
Query: 127 VHRDVKPDNMLLDKHGHLKLADFG 150
+HRD+K +N+ L + +K+ DFG
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFG 165
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 35.8 bits (81), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 22/155 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNL-------MSNYDV--P 103
F E +M N +V+L + ++M+ M GDL + M N V P
Sbjct: 97 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 156
Query: 104 EKWAKFY--CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+K E+ + ++ FVHRD+ N ++ + +K+ DFG M + T+
Sbjct: 157 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYETD 214
Query: 162 TKRLGRNGI--------EEIKAHPFFI-NDQWTFS 187
R G G+ E +K F +D W+F
Sbjct: 215 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 249
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 35.8 bits (81), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 22/155 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNL-------MSNYDV--P 103
F E +M N +V+L + ++M+ M GDL + M N V P
Sbjct: 75 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 134
Query: 104 EKWAKFY--CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+K E+ + ++ FVHRD+ N ++ + +K+ DFG M + T+
Sbjct: 135 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYETD 192
Query: 162 TKRLGRNGI--------EEIKAHPFFI-NDQWTFS 187
R G G+ E +K F +D W+F
Sbjct: 193 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 227
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 35.8 bits (81), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 56/111 (50%), Gaps = 19/111 (17%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCA 112
F E IM++ N IV+L+ + MVM+++P GDL + + + P KW+
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWS----V 123
Query: 113 EVVLALDAIHCLGF--------VHRDVKPDNML---LDKHGHL--KLADFG 150
++ L LD + + VHRD++ N+ LD++ + K+ADFG
Sbjct: 124 KLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG 174
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 50/114 (43%), Gaps = 13/114 (11%)
Query: 55 EERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF----- 109
+E +MA S ++ +L ++ +V MP G L++ V E +
Sbjct: 68 DEAYVMAGVGSPYVSRL-LGICLTSTVQLVTQLMPYGCLLD-----HVRENRGRLGSQDL 121
Query: 110 --YCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+C ++ + + + VHRD+ N+L+ H+K+ DFG ++ TE
Sbjct: 122 LNWCMQIAKGMSYLEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETE 175
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 35.4 bits (80), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 22/155 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNL-------MSNYDV--P 103
F E +M N +V+L + ++M+ M GDL + M N V P
Sbjct: 69 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 128
Query: 104 EKWAKFY--CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+K E+ + ++ FVHRD+ N ++ + +K+ DFG M + T+
Sbjct: 129 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYETD 186
Query: 162 TKRLGRNGI--------EEIKAHPFFI-NDQWTFS 187
R G G+ E +K F +D W+F
Sbjct: 187 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 221
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 22/155 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNL-------MSNYDV--P 103
F E +M N +V+L + ++M+ M GDL + M N V P
Sbjct: 66 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 125
Query: 104 EKWAKFY--CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+K E+ + ++ FVHRD+ N ++ + +K+ DFG M + T+
Sbjct: 126 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYETD 183
Query: 162 TKRLGRNGI--------EEIKAHPFFI-NDQWTFS 187
R G G+ E +K F +D W+F
Sbjct: 184 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 218
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 22/155 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNL-------MSNYDV--P 103
F E +M N +V+L + ++M+ M GDL + M N V P
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 121
Query: 104 EKWAKFY--CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+K E+ + ++ FVHRD+ N ++ + +K+ DFG M + T+
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYETD 179
Query: 162 TKRLGRNGI--------EEIKAHPFFI-NDQWTFS 187
R G G+ E +K F +D W+F
Sbjct: 180 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 214
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 35.4 bits (80), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 22/155 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNL-------MSNYDV--P 103
F E +M N +V+L + ++M+ M GDL + M N V P
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 104 EKWAKFY--CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+K E+ + ++ FVHRD+ N ++ + +K+ DFG M + T+
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYETD 185
Query: 162 TKRLGRNGI--------EEIKAHPFFI-NDQWTFS 187
R G G+ E +K F +D W+F
Sbjct: 186 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 220
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 35.4 bits (80), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 22/155 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNL-------MSNYDV--P 103
F E +M N +V+L + ++M+ M GDL + M N V P
Sbjct: 68 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 127
Query: 104 EKWAKFY--CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+K E+ + ++ FVHRD+ N ++ + +K+ DFG M + T+
Sbjct: 128 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG--MTRDIYETD 185
Query: 162 TKRLGRNGI--------EEIKAHPFFI-NDQWTFS 187
R G G+ E +K F +D W+F
Sbjct: 186 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 220
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 35.4 bits (80), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 6/83 (7%)
Query: 83 MVMDYMPGG--DLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLD- 139
+VMD + DL N S + K +++ ++ +H F+HRD+KPDN L+
Sbjct: 80 LVMDLLGPSLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGL 138
Query: 140 --KHGHLKLADFGTCMRMNKTGT 160
+ + + DFG + T T
Sbjct: 139 GRRANQVYIIDFGLAKKYRDTST 161
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 35.0 bits (79), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 104 EKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLL--DKHGHLKLADFG 150
EK ++ AL +H G HRD+KP+N L +K +KL DFG
Sbjct: 167 EKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFG 215
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Query: 64 NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHC 123
N WI+ + +S V Y DL +L+ Y ++ AL +
Sbjct: 111 NPVWIIMELCTLGELRSFLQVRKY--SLDLASLI-----------LYAYQLSTALAYLES 157
Query: 124 LGFVHRDVKPDNMLLDKHGHLKLADFG 150
FVHRD+ N+L+ + +KL DFG
Sbjct: 158 KRFVHRDIAARNVLVSSNDCVKLGDFG 184
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 35.0 bits (79), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Query: 64 NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHC 123
N WI+ + +S V Y DL +L+ Y ++ AL +
Sbjct: 85 NPVWIIMELCTLGELRSFLQVRKY--SLDLASLI-----------LYAYQLSTALAYLES 131
Query: 124 LGFVHRDVKPDNMLLDKHGHLKLADFG 150
FVHRD+ N+L+ + +KL DFG
Sbjct: 132 KRFVHRDIAARNVLVSSNDCVKLGDFG 158
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 35.0 bits (79), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Query: 64 NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHC 123
N WI+ + +S V Y DL +L+ Y ++ AL +
Sbjct: 86 NPVWIIMELCTLGELRSFLQVRKY--SLDLASLI-----------LYAYQLSTALAYLES 132
Query: 124 LGFVHRDVKPDNMLLDKHGHLKLADFG 150
FVHRD+ N+L+ + +KL DFG
Sbjct: 133 KRFVHRDIAARNVLVSSNDCVKLGDFG 159
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Query: 64 NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHC 123
N WI+ + +S V Y DL +L+ Y ++ AL +
Sbjct: 83 NPVWIIMELCTLGELRSFLQVRKY--SLDLASLI-----------LYAYQLSTALAYLES 129
Query: 124 LGFVHRDVKPDNMLLDKHGHLKLADFG 150
FVHRD+ N+L+ + +KL DFG
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFG 156
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 81 LYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIH--CLG------FVHRDVK 132
L++V DY G L + ++ Y V + L +H +G HRD+K
Sbjct: 77 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 136
Query: 133 PDNMLLDKHGHLKLADFGTCMR 154
N+L+ K+G +AD G +R
Sbjct: 137 SKNILVKKNGTCCIADLGLAVR 158
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Query: 64 NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHC 123
N WI+ + +S V Y DL +L+ Y ++ AL +
Sbjct: 83 NPVWIIMELCTLGELRSFLQVRKY--SLDLASLI-----------LYAYQLSTALAYLES 129
Query: 124 LGFVHRDVKPDNMLLDKHGHLKLADFG 150
FVHRD+ N+L+ + +KL DFG
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFG 156
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVNLM-SNYDVPEKWAKFYCAEVVLALDAIHCLGF 126
I++L L+++ +Y DL M N DV + K + +++ ++ H
Sbjct: 95 IIELKSVIHHNHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRC 153
Query: 127 VHRDVKPDNMLL-----DKHGHLKLADFG 150
+HRD+KP N+LL + LK+ DFG
Sbjct: 154 LHRDLKPQNLLLSVSDASETPVLKIGDFG 182
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Query: 64 NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHC 123
N WI+ + +S V Y DL +L+ Y ++ AL +
Sbjct: 88 NPVWIIMELCTLGELRSFLQVRKY--SLDLASLI-----------LYAYQLSTALAYLES 134
Query: 124 LGFVHRDVKPDNMLLDKHGHLKLADFG 150
FVHRD+ N+L+ + +KL DFG
Sbjct: 135 KRFVHRDIAARNVLVSSNDCVKLGDFG 161
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 35.0 bits (79), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Query: 64 NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHC 123
N WI+ + +S V Y DL +L+ Y ++ AL +
Sbjct: 80 NPVWIIMELCTLGELRSFLQVRKY--SLDLASLI-----------LYAYQLSTALAYLES 126
Query: 124 LGFVHRDVKPDNMLLDKHGHLKLADFG 150
FVHRD+ N+L+ + +KL DFG
Sbjct: 127 KRFVHRDIAARNVLVSSNDCVKLGDFG 153
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 81 LYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIH--CLG------FVHRDVK 132
L++V DY G L + ++ Y V + L +H +G HRD+K
Sbjct: 82 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 141
Query: 133 PDNMLLDKHGHLKLADFGTCMR 154
N+L+ K+G +AD G +R
Sbjct: 142 SKNILVKKNGTCCIADLGLAVR 163
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 81 LYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIH--CLG------FVHRDVK 132
L++V DY G L + ++ Y V + L +H +G HRD+K
Sbjct: 76 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 135
Query: 133 PDNMLLDKHGHLKLADFGTCMR 154
N+L+ K+G +AD G +R
Sbjct: 136 SKNILVKKNGTCCIADLGLAVR 157
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 81 LYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIH--CLG------FVHRDVK 132
L++V DY G L + ++ Y V + L +H +G HRD+K
Sbjct: 102 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 161
Query: 133 PDNMLLDKHGHLKLADFGTCMR 154
N+L+ K+G +AD G +R
Sbjct: 162 SKNILVKKNGTCCIADLGLAVR 183
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 34.7 bits (78), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 81 LYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIH--CLG------FVHRDVK 132
L++V DY G L + ++ Y V + L +H +G HRD+K
Sbjct: 79 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 138
Query: 133 PDNMLLDKHGHLKLADFGTCMR 154
N+L+ K+G +AD G +R
Sbjct: 139 SKNILVKKNGTCCIADLGLAVR 160
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 47/105 (44%), Gaps = 12/105 (11%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCA 112
F E IM I++L ++ + ++ ++M G L + + D +F
Sbjct: 62 FLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLND-----GQFTVI 116
Query: 113 EVVLALDAIHC-------LGFVHRDVKPDNMLLDKHGHLKLADFG 150
++V L I + +VHRD+ N+L++ + K++DFG
Sbjct: 117 QLVGMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFG 161
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 34.7 bits (78), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 81 LYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIH--CLG------FVHRDVK 132
L++V DY G L + ++ Y V + L +H +G HRD+K
Sbjct: 115 LWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLK 174
Query: 133 PDNMLLDKHGHLKLADFGTCMR 154
N+L+ K+G +AD G +R
Sbjct: 175 SKNILVKKNGTCCIADLGLAVR 196
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 34.7 bits (78), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 83 MVMDYMPGGDLVNLMSNYD----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLL 138
+ M+Y GGDL ++ ++ + E + +++ AL +H +HRD+KP+N++L
Sbjct: 96 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 155
Query: 139 DKHGHL---KLADFGTCMRMNKTGTETKRLGR---NGIEEIKAHPFFIN-DQWTFSNLR- 190
K+ D G +++ T+ +G E ++ + + D W+F L
Sbjct: 156 QPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAF 215
Query: 191 ECV 193
EC+
Sbjct: 216 ECI 218
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 34.7 bits (78), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 83 MVMDYMPGGDLVNLMSNYD----VPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLL 138
+ M+Y GGDL ++ ++ + E + +++ AL +H +HRD+KP+N++L
Sbjct: 95 LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL 154
Query: 139 DKHGHL---KLADFGTCMRMNKTGTETKRLGR---NGIEEIKAHPFFIN-DQWTFSNLR- 190
K+ D G +++ T+ +G E ++ + + D W+F L
Sbjct: 155 QPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAF 214
Query: 191 ECV 193
EC+
Sbjct: 215 ECI 217
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 34.7 bits (78), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 57 RDIMAHA---NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS-NYDV----PEKWAK 108
R++ AHA +V+ A+ + + + +Y GG L + +S NY + E K
Sbjct: 55 REVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK 114
Query: 109 FYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
+V L IH + VH D+KP N+ + +
Sbjct: 115 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 146
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 6/104 (5%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM----SNYDVPEKWAK 108
F E IM IV A +L +V +Y+ G L L+ + + E+
Sbjct: 81 FLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRL 140
Query: 109 FYCAEVVLALDAIHCLG--FVHRDVKPDNMLLDKHGHLKLADFG 150
+V ++ +H VHR++K N+L+DK +K+ DFG
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFG 184
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 34.3 bits (77), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 57 RDIMAHA---NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS-NYDV----PEKWAK 108
R++ AHA +V+ A+ + + + +Y GG L + +S NY + E K
Sbjct: 57 REVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK 116
Query: 109 FYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
+V L IH + VH D+KP N+ + +
Sbjct: 117 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 34.3 bits (77), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 57 RDIMAHA---NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS-NYDV----PEKWAK 108
R++ AHA +V+ A+ + + + +Y GG L + +S NY + E K
Sbjct: 57 REVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK 116
Query: 109 FYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
+V L IH + VH D+KP N+ + +
Sbjct: 117 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 148
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 34.3 bits (77), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 57 RDIMAHA---NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS-NYDV----PEKWAK 108
R++ AHA +V+ A+ + + + +Y GG L + +S NY + E K
Sbjct: 59 REVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELK 118
Query: 109 FYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
+V L IH + VH D+KP N+ + +
Sbjct: 119 DLLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 150
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 34.3 bits (77), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 27/155 (17%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDL---------VNLMSNYD---VPEKW 106
I H N I+ L A LY++++Y G+L + +YD VPE+
Sbjct: 97 IGKHKN---IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQ 153
Query: 107 AKF----YCA-EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
F C ++ ++ + +HRD+ N+L+ ++ +K+ADFG +N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXX 213
Query: 162 TKRL-GRNGIEEIKAHPFF------INDQWTFSNL 189
K GR ++ + F +D W+F L
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 34.3 bits (77), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 62/155 (40%), Gaps = 22/155 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNL-------MSNYDV--P 103
F E +M N +V+L + ++M+ M GDL + M N V P
Sbjct: 62 FLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAP 121
Query: 104 EKWAKFY--CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+K E+ + ++ FVHRD+ N + + +K+ DFG M + T+
Sbjct: 122 PSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAEDFTVKIGDFG--MTRDIYETD 179
Query: 162 TKRLGRNGI--------EEIKAHPFFI-NDQWTFS 187
R G G+ E +K F +D W+F
Sbjct: 180 YYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFG 214
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 34.3 bits (77), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 62 HANSEWIVQLHFAFQDAKSLYMVMD-YMPGGDLVNLMSNYD-VPEKWAKFYCAEVVLALD 119
HAN I+++ F++ +VM+ + G DL + + + E A + ++V A+
Sbjct: 88 HAN---IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVG 144
Query: 120 AIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNK 157
+ +HRD+K +N+++ + +KL DFG+ + +
Sbjct: 145 YLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 34.3 bits (77), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 16/128 (12%)
Query: 59 IMAHAN-SEWIVQLHFAFQDAKSLYM-VMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVL 116
+M H N + +IV D + Y+ VM+Y P G L +S + + V
Sbjct: 63 LMEHDNIARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTSDWVSSCRLAHSVTR 122
Query: 117 ALDAIHCL---------GFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGR 167
L +H HRD+ N+L+ G ++DFG MR+ TG RL R
Sbjct: 123 GLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRL--TGN---RLVR 177
Query: 168 NGIEEIKA 175
G E+ A
Sbjct: 178 PGEEDNAA 185
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 34.3 bits (77), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 27/155 (17%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS---------NYD---VPEKW 106
I H N I+ L A LY++++Y G+L + +YD VPE+
Sbjct: 97 IGKHKN---IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 107 AKF----YCA-EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
F C ++ ++ + +HRD+ N+L+ ++ +K+ADFG +N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXX 213
Query: 162 TKRL-GRNGIEEIKAHPFF------INDQWTFSNL 189
K GR ++ + F +D W+F L
Sbjct: 214 KKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 33.9 bits (76), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF--Y 110
F E IM + + IV+L + + +++M+ P G+L + + K Y
Sbjct: 72 FMSEAVIMKNLDHPHIVKL-IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY 130
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ A+ + + VHRD+ N+L+ +KL DFG
Sbjct: 131 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFG 170
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 33.9 bits (76), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 26/149 (17%)
Query: 28 LLKYR-YTLYALYSRYFQIKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMD 86
LL Y +T+ A+ + A F E +MA ++ IV+L K + ++ +
Sbjct: 71 LLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFE 130
Query: 87 YMPGGDL-----------VNLMSNYDV------------PEKWAKFYCA--EVVLALDAI 121
YM GDL V +S+ D+ P A+ C +V + +
Sbjct: 131 YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYL 190
Query: 122 HCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
FVHRD+ N L+ ++ +K+ADFG
Sbjct: 191 SERKFVHRDLATRNCLVGENMVVKIADFG 219
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 33.9 bits (76), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF--Y 110
F E IM + + IV+L + + +++M+ P G+L + + K Y
Sbjct: 56 FMSEAVIMKNLDHPHIVKL-IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY 114
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ A+ + + VHRD+ N+L+ +KL DFG
Sbjct: 115 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFG 154
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 33.9 bits (76), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 3/100 (3%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKF--Y 110
F E IM + + IV+L + + +++M+ P G+L + + K Y
Sbjct: 60 FMSEAVIMKNLDHPHIVKL-IGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLY 118
Query: 111 CAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
++ A+ + + VHRD+ N+L+ +KL DFG
Sbjct: 119 SLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFG 158
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 33.9 bits (76), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Query: 69 VQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY--CAEVVLALDAIHCLGF 126
+ L + L +V + G L + + + + K + +D +H
Sbjct: 70 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 129
Query: 127 VHRDVKPDNMLLDKHGHLKLADFG 150
+HRD+K +N+ L + +K+ DFG
Sbjct: 130 IHRDLKSNNIFLHEDNTVKIGDFG 153
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 33.9 bits (76), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Query: 69 VQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY--CAEVVLALDAIHCLGF 126
+ L + L +V + G L + + + + K + +D +H
Sbjct: 82 ILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSI 141
Query: 127 VHRDVKPDNMLLDKHGHLKLADFG 150
+HRD+K +N+ L + +K+ DFG
Sbjct: 142 IHRDLKSNNIFLHEDNTVKIGDFG 165
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 33.5 bits (75), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/84 (22%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 69 VQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFY--CAEVVLALDAIHCLGF 126
+ L + A L +V + G L + + + + K + +D +H
Sbjct: 66 ILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSI 125
Query: 127 VHRDVKPDNMLLDKHGHLKLADFG 150
+HRD+K +N+ L + +K+ DFG
Sbjct: 126 IHRDLKSNNIFLHEDLTVKIGDFG 149
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Query: 64 NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHC 123
N WI+ + +S V + DL +L+ Y ++ AL +
Sbjct: 463 NPVWIIMELCTLGELRSFLQVRKF--SLDLASLI-----------LYAYQLSTALAYLES 509
Query: 124 LGFVHRDVKPDNMLLDKHGHLKLADFG 150
FVHRD+ N+L+ + +KL DFG
Sbjct: 510 KRFVHRDIAARNVLVSSNDCVKLGDFG 536
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 8/82 (9%)
Query: 81 LYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHCLGF--------VHRDVK 132
LY++ DY G L + + + + K V L +H F HRD+K
Sbjct: 110 LYLITDYHENGSLYDYLKSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLK 169
Query: 133 PDNMLLDKHGHLKLADFGTCMR 154
N+L+ K+G +AD G ++
Sbjct: 170 SKNILVKKNGTCCIADLGLAVK 191
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%), Gaps = 13/87 (14%)
Query: 64 NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHC 123
N WI+ + +S V + DL +L+ Y ++ AL +
Sbjct: 83 NPVWIIMELCTLGELRSFLQVRKF--SLDLASLI-----------LYAYQLSTALAYLES 129
Query: 124 LGFVHRDVKPDNMLLDKHGHLKLADFG 150
FVHRD+ N+L+ + +KL DFG
Sbjct: 130 KRFVHRDIAARNVLVSSNDCVKLGDFG 156
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 33.5 bits (75), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 19/110 (17%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCA 112
F E IM++ N IV+L+ + MVM+++P GDL + + + P KW+
Sbjct: 70 FQREVFIMSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAHPIKWS----V 123
Query: 113 EVVLALDAIHCLGF--------VHRDVKPDNML---LDKHGHL--KLADF 149
++ L LD + + VHRD++ N+ LD++ + K+ADF
Sbjct: 124 KLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADF 173
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 22/155 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM--------SNYDVPE 104
F E +M +V+L + +VM+ M GDL + + +N P
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 105 KWAK---FYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+ AE+ + ++ FVHRD+ N ++ +K+ DFG M + T+
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG--MTRDIXETD 184
Query: 162 TKRLGRNGI--------EEIKAHPFFI-NDQWTFS 187
R G G+ E +K F +D W+F
Sbjct: 185 XXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 33.1 bits (74), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 22/155 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM--------SNYDVPE 104
F E +M +V+L + +VM+ M GDL + + +N P
Sbjct: 67 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 105 KWAK---FYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+ AE+ + ++ FVHRD+ N ++ +K+ DFG M + T+
Sbjct: 127 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG--MTRDIXETD 184
Query: 162 TKRLGRNGI--------EEIKAHPFFI-NDQWTFS 187
R G G+ E +K F +D W+F
Sbjct: 185 XXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 219
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 61/155 (39%), Gaps = 22/155 (14%)
Query: 53 FWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM--------SNYDVPE 104
F E +M +V+L + +VM+ M GDL + + +N P
Sbjct: 64 FLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 123
Query: 105 KWAK---FYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTE 161
+ AE+ + ++ FVHRD+ N ++ +K+ DFG M + T+
Sbjct: 124 PTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFG--MTRDIXETD 181
Query: 162 TKRLGRNGI--------EEIKAHPFFI-NDQWTFS 187
R G G+ E +K F +D W+F
Sbjct: 182 XXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFG 216
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 33.1 bits (74), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 18/113 (15%)
Query: 55 EERDIMAH-ANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---------------S 98
E IM+H E IV L A + ++ +Y GDL+N + +
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 99 NYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHL-KLADFG 150
N + + + ++V + + +HRDV N+LL +GH+ K+ DFG
Sbjct: 158 NSTLSTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFG 209
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 20/115 (17%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS---------NYD---VPEKW 106
I H N I+ L A LY++++Y G+L + +YD VPE+
Sbjct: 143 IGKHKN---IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 199
Query: 107 AKF----YCA-EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
F C ++ ++ + +HRD+ N+L+ ++ +K+ADFG +N
Sbjct: 200 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 254
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 16/102 (15%)
Query: 67 WIVQL--HFAFQDAKSLYMVMDYMPGGDLVNLMSN-------YDVPEKWAKFYCAEVVLA 117
+IV L HF F++ L +V + M +L +L+ N ++ K+A+ C ++
Sbjct: 117 YIVHLKRHFMFRN--HLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 118 LDAIHCLGFVHRDVKPDNMLL--DKHGHLKLADFGTCMRMNK 157
A L +H D+KP+N+LL K +K+ DFG+ ++ +
Sbjct: 174 --ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 213
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 32.7 bits (73), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 23/97 (23%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVN------------LMSNYDVPEKWAKFYCAEVV 115
IV+L SL +V Y+P G L++ L+ N+ V +Y E
Sbjct: 77 IVRL-LGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE-- 133
Query: 116 LALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTC 152
H G VHR++ N+LL +++ADFG
Sbjct: 134 ------H--GMVHRNLAARNVLLKSPSQVQVADFGVA 162
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 16/102 (15%)
Query: 67 WIVQL--HFAFQDAKSLYMVMDYMPGGDLVNLMSN-------YDVPEKWAKFYCAEVVLA 117
+IV L HF F++ L +V + M +L +L+ N ++ K+A+ C ++
Sbjct: 98 YIVHLKRHFMFRN--HLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 154
Query: 118 LDAIHCLGFVHRDVKPDNMLL--DKHGHLKLADFGTCMRMNK 157
A L +H D+KP+N+LL K +K+ DFG+ ++ +
Sbjct: 155 --ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 194
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 41/97 (42%), Gaps = 23/97 (23%)
Query: 68 IVQLHFAFQDAKSLYMVMDYMPGGDLVN------------LMSNYDVPEKWAKFYCAEVV 115
IV+L SL +V Y+P G L++ L+ N+ V +Y E
Sbjct: 95 IVRL-LGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYYLEE-- 151
Query: 116 LALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTC 152
H G VHR++ N+LL +++ADFG
Sbjct: 152 ------H--GMVHRNLAARNVLLKSPSQVQVADFGVA 180
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ +D +H +HRD+K +N+ L + +K+ DFG
Sbjct: 140 QTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFG 177
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 20/115 (17%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS---------NYD---VPEKW 106
I H N I+ L A LY++++Y G+L + +YD VPE+
Sbjct: 86 IGKHKN---IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 142
Query: 107 AKF----YCA-EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
F C ++ ++ + +HRD+ N+L+ ++ +K+ADFG +N
Sbjct: 143 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 197
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 48/113 (42%), Gaps = 18/113 (15%)
Query: 55 EERDIMAH-ANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---------------S 98
E IM+H E IV L A + ++ +Y GDL+N + +
Sbjct: 98 SELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIA 157
Query: 99 NYDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHL-KLADFG 150
N + + ++V + + +HRDV N+LL +GH+ K+ DFG
Sbjct: 158 NSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFG 209
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 20/115 (17%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS---------NYD---VPEKW 106
I H N I+ L A LY++++Y G+L + +YD VPE+
Sbjct: 84 IGKHKN---IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 140
Query: 107 AKF----YCA-EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
F C ++ ++ + +HRD+ N+L+ ++ +K+ADFG +N
Sbjct: 141 MTFKDLVSCTYQLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDIN 195
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.7 bits (73), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 13/87 (14%)
Query: 64 NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHC 123
N WI+ + +S V + DL +L+ Y ++ AL +
Sbjct: 463 NPVWIIMELCTLGELRSFLQVRKF--SLDLASLI-----------LYAYQLSTALAYLES 509
Query: 124 LGFVHRDVKPDNMLLDKHGHLKLADFG 150
FVHRD+ N+L+ +KL DFG
Sbjct: 510 KRFVHRDIAARNVLVSATDCVKLGDFG 536
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 13/87 (14%)
Query: 64 NSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMSNYDVPEKWAKFYCAEVVLALDAIHC 123
N WI+ + +S V + DL +L+ Y ++ AL +
Sbjct: 83 NPVWIIMELCTLGELRSFLQVRKF--SLDLASLI-----------LYAYQLSTALAYLES 129
Query: 124 LGFVHRDVKPDNMLLDKHGHLKLADFG 150
FVHRD+ N+L+ +KL DFG
Sbjct: 130 KRFVHRDIAARNVLVSATDCVKLGDFG 156
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 20/115 (17%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS---------NYD---VPEKW 106
I H N I+ L A LY++++Y G+L + +YD VPE+
Sbjct: 97 IGKHKN---IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 107 AKF----YCA-EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
F C ++ ++ + +HRD+ N+L+ ++ +K+ADFG +N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 32.7 bits (73), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 20/115 (17%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS---------NYD---VPEKW 106
I H N I+ L A LY++++Y G+L + +YD VPE+
Sbjct: 97 IGKHKN---IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 107 AKF----YCA-EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
F C ++ ++ + +HRD+ N+L+ ++ +K+ADFG +N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 20/115 (17%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS---------NYD---VPEKW 106
I H N I+ L A LY++++Y G+L + +YD VPE+
Sbjct: 89 IGKHKN---IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 145
Query: 107 AKF----YCA-EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
F C ++ ++ + +HRD+ N+L+ ++ +K+ADFG +N
Sbjct: 146 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 200
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 20/115 (17%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS---------NYD---VPEKW 106
I H N I+ L A LY++++Y G+L + +YD VPE+
Sbjct: 97 IGKHKN---IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 107 AKF----YCA-EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
F C ++ ++ + +HRD+ N+L+ ++ +K+ADFG +N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 20/115 (17%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS---------NYD---VPEKW 106
I H N I+ L A LY++++Y G+L + +YD VPE+
Sbjct: 97 IGKHKN---IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 107 AKF----YCA-EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
F C ++ ++ + +HRD+ N+L+ ++ +K+ADFG +N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 32.3 bits (72), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 43 FQIKRSDSAFFWEE-RDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGG--DLVNLMSN 99
F+ +RSD+ +E R A I +++ Q+ +V+D + DL++L
Sbjct: 41 FEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGR 100
Query: 100 YDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
K +++ + +IH V+RD+KPDN L+ +
Sbjct: 101 -KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGR 140
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ +D +H +HRD+K +N+ L + +K+ DFG
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 177
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 32.3 bits (72), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 47/101 (46%), Gaps = 4/101 (3%)
Query: 43 FQIKRSDSAFFWEE-RDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGG--DLVNLMSN 99
F+ +RSD+ +E R A I +++ Q+ +V+D + DL++L
Sbjct: 42 FEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGR 101
Query: 100 YDVPEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDK 140
K +++ + +IH V+RD+KPDN L+ +
Sbjct: 102 -KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGR 141
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ +D +H +HRD+K +N+ L + +K+ DFG
Sbjct: 132 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 169
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ +D +H +HRD+K +N+ L + +K+ DFG
Sbjct: 139 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 176
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 32.3 bits (72), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 12/38 (31%), Positives = 22/38 (57%)
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+ +D +H +HRD+K +N+ L + +K+ DFG
Sbjct: 140 QTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 177
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 117 ALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+D +H +HRD+K +N+ L + +K+ DFG
Sbjct: 116 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 149
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 32.3 bits (72), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 117 ALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+D +H +HRD+K +N+ L + +K+ DFG
Sbjct: 116 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 149
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 16/102 (15%)
Query: 67 WIVQL--HFAFQDAKSLYMVMDYMPGGDLVNLMSN-------YDVPEKWAKFYCAEVVLA 117
+IV L HF F++ L +V + M +L +L+ N ++ K+A+ C ++
Sbjct: 117 YIVHLKRHFMFRN--HLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 118 LDAIHCLGFVHRDVKPDNMLL--DKHGHLKLADFGTCMRMNK 157
A L +H D+KP+N+LL K +K+ DFG+ ++ +
Sbjct: 174 --ATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQ 213
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 117 ALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+D +H +HRD+K +N+ L + +K+ DFG
Sbjct: 118 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 151
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 32.3 bits (72), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 117 ALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+D +H +HRD+K +N+ L + +K+ DFG
Sbjct: 121 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 154
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 21/34 (61%)
Query: 117 ALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFG 150
+D +H +HRD+K +N+ L + +K+ DFG
Sbjct: 121 GMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFG 154
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 32.0 bits (71), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 14/108 (12%)
Query: 56 ERDIMAH-ANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAK--- 108
E IM+H E IV L A + ++ +Y GDL+N + + D+ ++ +
Sbjct: 99 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 158
Query: 109 -----FYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHL-KLADFG 150
+ ++V + + +HRDV N+LL +GH+ K+ DFG
Sbjct: 159 LRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFG 205
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 8/74 (10%)
Query: 82 YMVMDYMPGGDLVNLMSNYDVPEKWAKF-----YCAEVVLALDAIHCLGFVHRDVKPDNM 136
++++ YM GDL+ + + P++ + +V ++ + FVHRD+ N
Sbjct: 99 HVLLPYMCHGDLLQFIRS---PQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNC 155
Query: 137 LLDKHGHLKLADFG 150
+LD+ +K+ADFG
Sbjct: 156 MLDESFTVKVADFG 169
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 32.0 bits (71), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 25/113 (22%), Positives = 50/113 (44%), Gaps = 8/113 (7%)
Query: 45 IKRSDSAFFWEERDIMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNL--MSNYDV 102
IK E R + +E + Q+++ K MV++ + G L +L + +
Sbjct: 39 IKSRAPQLHLEYRFYKQLSATEGVPQVYYFGPXGKYNAMVLELL-GPSLEDLFDLCDRTF 97
Query: 103 PEKWAKFYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGH-----LKLADFG 150
K +++ ++ +H ++RDVKP+N L+ + G + + DFG
Sbjct: 98 TLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFG 150
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 14/108 (12%)
Query: 56 ERDIMAH-ANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLM---SNYDVPEKWAK--- 108
E IM+H E IV L A + ++ +Y GDL+N + + D+ ++ +
Sbjct: 91 ELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLE 150
Query: 109 -----FYCAEVVLALDAIHCLGFVHRDVKPDNMLLDKHGHL-KLADFG 150
+ ++V + + +HRDV N+LL +GH+ K+ DFG
Sbjct: 151 LRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLL-TNGHVAKIGDFG 197
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 20/115 (17%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS---------NYD---VPEKW 106
I H N I+ L A LY++++Y G+L + +YD VPE+
Sbjct: 97 IGKHKN---IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 107 AKF----YCA-EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
F C ++ ++ + +HRD+ N+L+ ++ +++ADFG +N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDIN 208
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 31.6 bits (70), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 51/115 (44%), Gaps = 20/115 (17%)
Query: 59 IMAHANSEWIVQLHFAFQDAKSLYMVMDYMPGGDLVNLMS---------NYD---VPEKW 106
I H N I+ L A LY+++ Y G+L + +YD VPE+
Sbjct: 97 IGKHKN---IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQ 153
Query: 107 AKF----YCA-EVVLALDAIHCLGFVHRDVKPDNMLLDKHGHLKLADFGTCMRMN 156
F C ++ ++ + +HRD+ N+L+ ++ +K+ADFG +N
Sbjct: 154 MTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDIN 208
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 31.6 bits (70), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 125 GFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGRN 168
HRD+K N+L+ K+G +AD G + M+ T +G N
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAV-MHSQSTNQLDVGNN 175
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 125 GFVHRDVKPDNMLLDKHGHLKLADFGTCMRMNKTGTETKRLGRN 168
HRD+K N+L+ K+G +AD G + M+ T +G N
Sbjct: 133 AIAHRDLKSKNILVKKNGQCCIADLGLAV-MHSQSTNQLDVGNN 175
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 31.6 bits (70), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/70 (22%), Positives = 32/70 (45%), Gaps = 14/70 (20%)
Query: 113 EVVLALDAIHCLGFVHRDVKPDNMLLDKHG-------------HLKLADFGTCMRMNKTG 159
++ + +H L +HRD+KP N+L+ + ++DFG C +++ +G
Sbjct: 123 QIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLD-SG 181
Query: 160 TETKRLGRNG 169
+ R N
Sbjct: 182 QSSFRTNLNN 191
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.139 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,246,579
Number of Sequences: 62578
Number of extensions: 357388
Number of successful extensions: 2219
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 954
Number of HSP's successfully gapped in prelim test: 112
Number of HSP's that attempted gapping in prelim test: 771
Number of HSP's gapped (non-prelim): 1203
length of query: 245
length of database: 14,973,337
effective HSP length: 96
effective length of query: 149
effective length of database: 8,965,849
effective search space: 1335911501
effective search space used: 1335911501
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 50 (23.9 bits)