BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16294
(486 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9IA31|GLI3_CHICK Transcriptional activator GLI3 (Fragment) OS=Gallus gallus GN=GLI3
PE=1 SV=1
Length = 1544
Score = 234 bits (596), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 160/409 (39%), Positives = 208/409 (50%), Gaps = 74/409 (18%)
Query: 32 PPTATSSIGS--AEFPFPLDGSRLLASPRSHLKQNRKRALSASPYSDSIADIHTMIRFSP 89
P AT+ G+ E+ +D +R SPR + +RKR LS SP SD D+ TMIR SP
Sbjct: 256 PSAATAGAGALHMEYLHAMDSTRF-PSPRLSARPSRKRTLSISPLSDHSFDLQTMIRTSP 314
Query: 90 NSLVNSLVNSTASSRSGGSYGHLSAGALSPAL---HPSMTPHLQQLQAHLLRS----GGL 142
NSLV L NS +S + GSYGHLSA A+SPAL +P LQQ+ ++ G
Sbjct: 315 NSLVTILNNSCSSWSASGSYGHLSASAISPALSFTYPPTPVSLQQMHQQIISRQQTLGSA 374
Query: 143 LPPQPPFYHP--------------HALSPL---------------NSDLHSTKLGD---- 169
PP HP L+P+ S+ + GD
Sbjct: 375 FGHSPPLIHPAPTFPTQRPIPGIPSVLNPVQVSSGPSESTQHNKPTSESAVSSTGDPMHN 434
Query: 170 KEAKVRAEADTSSMGGGASWKPMKIKRETKQHSPESPAGDK----YEPGDFVETNCHWKD 225
K +K++ + D S G G+ ++ + + +P GDK EP ETNCHW+
Sbjct: 435 KRSKIKPDEDLPSPGAGS------VQEQPEGMTPVKEEGDKDESKQEPEVVYETNCHWEG 488
Query: 226 CGLEFGTQDILVKHINNDHIHANKKSFICRWEDCTRDEKPFKAQYMLVVHMRRHTGEKPH 285
C EF TQ+ LV HINNDHIH KK F+CRW DC+R++KPFKAQYMLVVHMRRHTGEKPH
Sbjct: 489 CSREFDTQEQLVHHINNDHIHGEKKEFVCRWLDCSREQKPFKAQYMLVVHMRRHTGEKPH 548
Query: 286 KCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVMRRIELNIRT 345
KCT F+ ++ + R+ +L +T + K V N
Sbjct: 549 KCT----FEGCTKAYS----------RLENL-----KTHLRSHTGEKPYVCEHEGCN--K 587
Query: 346 ELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKTVHAP 394
+ S + + + KPYVC CTKRYTDPSSLRKH+KTVH P
Sbjct: 588 AFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGP 636
>sp|Q61602|GLI3_MOUSE Transcriptional activator GLI3 OS=Mus musculus GN=Gli3 PE=1 SV=2
Length = 1583
Score = 232 bits (592), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 171/413 (41%), Positives = 208/413 (50%), Gaps = 60/413 (14%)
Query: 32 PPTATSSIGS--AEFPFPLDGSRLLASPRSHLKQNRKRALSASPYSDSIADIHTMIRFSP 89
P AT+ G+ E+ +D +R SPR + +RKR LS SP SD D+ TMIR SP
Sbjct: 256 PSAATAGAGAIHMEYLHAMDSTRF-PSPRLSARPSRKRTLSISPLSDHSFDLQTMIRTSP 314
Query: 90 NSLVNSLVNSTASSRSGGSYGHLSAGALSPAL---HPSMTPHLQQLQAHLLRS---GGLL 143
NSLV L NS +SS + GSYGHLSA A+SPAL +PS L Q L R G
Sbjct: 315 NSLVTILNNSRSSSSASGSYGHLSASAISPALSFTYPSAPVSLHMHQQILSRQQSLGSAF 374
Query: 144 PPQPPFYHPHALSP-----------LNS-DLHSTKLGDKEAKVRAEADTSSMGGGASWKP 191
PP HP P LN + S ++K +E+ SS G K
Sbjct: 375 GHSPPLIHPAPTFPTQRPIPGIPTVLNPVQVSSGPSESSQSKPTSESAVSSTGDPMHNKR 434
Query: 192 MKIKRETKQHSP------ESPAG------------DKYEPGDFVETNCHWKDCGLEFGTQ 233
KIK + SP E P G K EP ETNCHW+ C EF TQ
Sbjct: 435 SKIKPDEDLPSPGSRGQQEQPEGTTLVKEEADKDESKQEPEVIYETNCHWEGCTREFDTQ 494
Query: 234 DILVKHINNDHIHANKKSFICRWEDCTRDEKPFKAQYMLVVHMRRHTGEKPHKCTDLEAF 293
D LV HINNDHIH KK F+CRW DC+R++KPFKAQYMLVVHMRRHTGEKPHKCT F
Sbjct: 495 DQLVHHINNDHIHGEKKEFVCRWLDCSREQKPFKAQYMLVVHMRRHTGEKPHKCT----F 550
Query: 294 DTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVMRRIELNIRTELTLMSLN 353
+ ++ + R+ +L +T + K V N + S
Sbjct: 551 EGCTKAYS----------RLENL-----KTHLRSHTGEKPYVCEHEGCN--KAFSNASDR 593
Query: 354 VQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKTVHAPASLNPVPQHKDM 406
+ + + KPYVC CTKRYTDPSSLRKH+KTVH P + Q DM
Sbjct: 594 AKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGPEAHVTKKQRGDM 646
>sp|Q91660|GLI3_XENLA Zinc finger protein GLI3 OS=Xenopus laevis GN=gli3 PE=2 SV=1
Length = 1569
Score = 230 bits (587), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 165/406 (40%), Positives = 209/406 (51%), Gaps = 62/406 (15%)
Query: 29 LPPPPTATSSIGS--AEFPFPLDGSRLLASPRSHLKQNRKRALSASPYSDSIADIHTMIR 86
P P TA + + E+ ++ SR +SPR + +RKR LS SP SD D+ TMIR
Sbjct: 256 FPSPATAGAGANALHMEYLHAMESSRF-SSPRLSARPSRKRTLSISPLSDHSFDLQTMIR 314
Query: 87 FSPNSLVNSLVNSTASSRSGGSYGHLSAGALSPALHPSMTP---HLQQLQAHLLRS---- 139
SPNSLV L NS +SS + GSYGHL+A A+SPAL+ + P LQQ+ ++
Sbjct: 315 NSPNSLVTILNNSRSSSSASGSYGHLAASAISPALNFAYQPTPVSLQQMHQQIMSRQHSI 374
Query: 140 GGLLPPQPPFYHPHALSP-------LNSDLHSTK--LGDKEA----KVRAEADTSSMGGG 186
G PP HP P + S L+ + +G EA K +E+ SS G
Sbjct: 375 GSAFGHSPPLLHPAPTFPSQRTIPGIPSVLNPVQVSIGPSEAAQQNKPTSESAVSSTGDL 434
Query: 187 ASWKPMKIKRETKQHSP------ESPAG------------DKYEPGDFVETNCHWKDCGL 228
K K+K E SP + P G K E ETNCHW+ C
Sbjct: 435 LHNKRSKVKPEEDHPSPGAVCIQDQPDGMTLVKEEGVKDESKQEAEVVYETNCHWEGCSR 494
Query: 229 EFGTQDILVKHINNDHIHANKKSFICRWEDCTRDEKPFKAQYMLVVHMRRHTGEKPHKCT 288
EF TQ+ LV HINNDHIH KK F+CRW DC+R++KPFKAQYMLVVHMRRHTGEKPHKCT
Sbjct: 495 EFDTQEQLVHHINNDHIHGEKKEFVCRWLDCSREQKPFKAQYMLVVHMRRHTGEKPHKCT 554
Query: 289 DLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVMRRIELNIRTELT 348
F+ S+ + R+ +L +T + K V N +
Sbjct: 555 ----FEGCSKAYS----------RLENL-----KTHLRSHTGEKPYVCEHEGCN--KAFS 593
Query: 349 LMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKTVHAP 394
S + + + KPYVC CTKRYTDPSSLRKH+KTVH P
Sbjct: 594 NASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGP 639
>sp|P10071|GLI3_HUMAN Transcriptional activator GLI3 OS=Homo sapiens GN=GLI3 PE=1 SV=6
Length = 1580
Score = 228 bits (581), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 164/403 (40%), Positives = 205/403 (50%), Gaps = 64/403 (15%)
Query: 32 PPTATSSIGS--AEFPFPLDGSRLLASPRSHLKQNRKRALSASPYSDSIADIHTMIRFSP 89
P AT+ G+ E+ +D +R +SPR + +RKR LS SP SD D+ TMIR SP
Sbjct: 256 PSAATAGTGAIHMEYLHAMDSTRF-SSPRLSARPSRKRTLSISPLSDHSFDLQTMIRTSP 314
Query: 90 NSLVNSLVNSTASSRSGGSYGHLSAGALSPAL-------------HPSMTPHLQQLQAHL 136
NSLV L NS +SS + GSYGHLSA A+SPAL H + Q L +
Sbjct: 315 NSLVTILNNSRSSSSASGSYGHLSASAISPALSFTYSSAPVSLHMHQQILSRQQSLGSAF 374
Query: 137 LRSGGLLPPQPPFYH-------PHALSPLNSDLHSTKLGDKEAKVRAEADTSSMGGGASW 189
S L+ P P F P L+P+ + S + K +E+ SS G
Sbjct: 375 GHSPPLIHPAPTFPTQRPIPGIPTVLNPVQ--VSSGPSESSQNKPTSESAVSSTGDPMHN 432
Query: 190 KPMKIKRETKQHSP------ESPAG------------DKYEPGDFVETNCHWKDCGLEFG 231
K KIK + SP E P G K EP ETNCHW+ C EF
Sbjct: 433 KRSKIKPDEDLPSPGARGQQEQPEGTTLVKEEGDKDESKQEPEVIYETNCHWEGCAREFD 492
Query: 232 TQDILVKHINNDHIHANKKSFICRWEDCTRDEKPFKAQYMLVVHMRRHTGEKPHKCTDLE 291
TQ+ LV HINNDHIH KK F+CRW DC+R++KPFKAQYMLVVHMRRHTGEKPHKCT
Sbjct: 493 TQEQLVHHINNDHIHGEKKEFVCRWLDCSREQKPFKAQYMLVVHMRRHTGEKPHKCT--- 549
Query: 292 AFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVMRRIELNIRTELTLMS 351
F+ ++ + R+ +L +T + K V N + S
Sbjct: 550 -FEGCTKAYS----------RLENL-----KTHLRSHTGEKPYVCEHEGCN--KAFSNAS 591
Query: 352 LNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKTVHAP 394
+ + + KPYVC CTKRYTDPSSLRKH+KTVH P
Sbjct: 592 DRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGP 634
>sp|Q91690|GLI1_XENLA Zinc finger protein GLI1 (Fragment) OS=Xenopus laevis GN=gli1 PE=2
SV=2
Length = 1360
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 151/367 (41%), Positives = 197/367 (53%), Gaps = 52/367 (14%)
Query: 49 DGSRLLASPRSHLKQNRKRALSASPYSDSIADIHTMIRFSPNSLVNSLVNSTASSRSGGS 108
DGSR ++PRS +K ++KRA+S SP SD+ D+ TMIR SPNSLV + +NS SS SG S
Sbjct: 69 DGSRF-STPRSTMKLSKKRAMSISPLSDASIDLQTMIRTSPNSLV-AFINSRCSSASG-S 125
Query: 109 YGHLSAGALSPALHPSMTPHLQQLQAHLLRSGGLLPPQPPFYHPHA---------LSPLN 159
YGHLS G +SP+L + Q+ QA S L+P Y+ H L P +
Sbjct: 126 YGHLSIGTISPSLGYQNCLNHQRPQAGPYGSNPLMP-----YNSHEHLSSRGMSMLQPRS 180
Query: 160 SDLHST------------KLGDKEAKVRAEADTSSMGGGASWKPMKIKRETKQHSPESPA 207
S H +G K + +E D SS + P+ + + E
Sbjct: 181 SVKHCQLKSEPLSITGLDTIGSKRLEDGSEGDISSPASVGTQDPL-LGLLDGRDDLEKDD 239
Query: 208 GDKYEPGDFVETNCHWKDCGLEFGTQDILVKHINNDHIHANKKSFICRWEDCTRDEKPFK 267
G K+EP ETNCHW+ C EF TQ+ LV HINN+HIH KK F+C W+DC+R+ +PFK
Sbjct: 240 G-KHEPETVYETNCHWESCTKEFDTQEHLVHHINNEHIHGEKKEFVCHWQDCSRELRPFK 298
Query: 268 AQYMLVVHMRRHTGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNI 327
AQYMLVVHMRRHTGEKPHKCT F+ ++ + R+ +L +T +
Sbjct: 299 AQYMLVVHMRRHTGEKPHKCT----FEGCNKAYS----------RLENL-----KTHLRS 339
Query: 328 LAVVKRLVMRRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKH 387
K V N + S + + + KPYVC CTKRYTDPSSLRKH
Sbjct: 340 HTGEKPYVCEHEGCN--KAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKH 397
Query: 388 IKTVHAP 394
+KTVH P
Sbjct: 398 VKTVHGP 404
>sp|Q5IS56|GLI3_PANTR Transcriptional activator GLI3 OS=Pan troglodytes GN=GLI3 PE=2 SV=1
Length = 1580
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 164/403 (40%), Positives = 204/403 (50%), Gaps = 64/403 (15%)
Query: 32 PPTATSSIGS--AEFPFPLDGSRLLASPRSHLKQNRKRALSASPYSDSIADIHTMIRFSP 89
P AT+ G+ E+ +D +R SPR + +RKR LS SP SD D+ TMIR SP
Sbjct: 256 PSAATAGTGAIHMEYLHAMDSTRF-PSPRLSARPSRKRTLSISPLSDHSFDLQTMIRTSP 314
Query: 90 NSLVNSLVNSTASSRSGGSYGHLSAGALSPAL-------------HPSMTPHLQQLQAHL 136
NSLV L NS +SS + GSYGHLSA A+SPAL H + Q L +
Sbjct: 315 NSLVTILNNSRSSSSASGSYGHLSASAISPALSFTYSSAPVSLHMHQQILSRQQSLGSAF 374
Query: 137 LRSGGLLPPQPPFYH-------PHALSPLNSDLHSTKLGDKEAKVRAEADTSSMGGGASW 189
S L+ P P F P L+P+ + S + K +E+ SS G
Sbjct: 375 GHSPPLIHPAPTFPTQRPIPGIPTVLNPVQ--VSSGPSESSQNKPTSESAVSSTGDPMHN 432
Query: 190 KPMKIKRETKQHSP------ESPAG------------DKYEPGDFVETNCHWKDCGLEFG 231
K KIK + SP E P G K EP ETNCHW+ C EF
Sbjct: 433 KRSKIKPDEDLPSPGARGQQEQPEGTTLVKEEGDKDESKQEPEVIYETNCHWEGCAREFD 492
Query: 232 TQDILVKHINNDHIHANKKSFICRWEDCTRDEKPFKAQYMLVVHMRRHTGEKPHKCTDLE 291
TQ+ LV HINNDHIH KK F+CRW DC+R++KPFKAQYMLVVHMRRHTGEKPHKCT
Sbjct: 493 TQEQLVHHINNDHIHGEKKEFVCRWLDCSREQKPFKAQYMLVVHMRRHTGEKPHKCT--- 549
Query: 292 AFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVMRRIELNIRTELTLMS 351
F+ ++ + R+ +L +T + K V N + S
Sbjct: 550 -FEGCTKAYS----------RLENL-----KTHLRSHTGEKPYVCEHEGCN--KAFSNAS 591
Query: 352 LNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKTVHAP 394
+ + + KPYVC CTKRYTDPSSLRKH+KTVH P
Sbjct: 592 DRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVKTVHGP 634
>sp|Q91661|GLI4_XENLA Zinc finger protein GLI4 OS=Xenopus laevis GN=gli4 PE=2 SV=1
Length = 1361
Score = 226 bits (575), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 160/380 (42%), Positives = 198/380 (52%), Gaps = 50/380 (13%)
Query: 43 EFPFPLDGSRLLASPRSHLKQNRKRALSASPYSDSIADIHTMIRFSPNSLVNSLVNSTAS 102
++ P+D SR +SPR + +RKRALS SP SD+ D+ TMIR SPNSLV + NS +S
Sbjct: 86 DYLTPMDVSRF-SSPRVTPRLSRKRALSISPLSDASIDLQTMIRTSPNSLVAYINNSRSS 144
Query: 103 SRSGGSYGHLSAGALSPA----LHP----SMTPHLQQLQAHLLRSGGLLPPQPPFY--HP 152
S + GSYGHLSAGA+SPA +H S Q+ + LL P P F
Sbjct: 145 SAASGSYGHLSAGAISPAFSFPIHKPCSLSAALSQQRSLSSSFGHTPLLHPSPTFASRQQ 204
Query: 153 HALSPLNSDLHSTKLGDKEA---KVRAEADTSSMGGGASWKPMKIKRETKQHS---PESP 206
AL+ N S ++ KV +E+ SS K K+K E + S P+ P
Sbjct: 205 GALTSANPAPPSNNSSAPDSVLNKVSSESAVSSTVNQVIHKRSKVKTEEEADSVRFPQPP 264
Query: 207 A------------GDKYEPGDFVETNCHWKDCGLEFGTQDILVKHINNDHIHANKKSFIC 254
K EP ETNCHW C EF TQD LV HINNDHIH KK F+C
Sbjct: 265 DHLTDLKEDLDKDECKQEPEHIYETNCHWDGCSKEFDTQDQLVHHINNDHIHGEKKEFVC 324
Query: 255 RWEDCTRDEKPFKAQYMLVVHMRRHTGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRIS 314
RW+DC+R++KPFKAQYMLVVHMRRHTGEKPHKCT F K R+
Sbjct: 325 RWQDCSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCF--------------KAYSRLE 370
Query: 315 DLIPVRNRTRVNILAVVKRLVMRRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENC 374
+L +T + K V N + S + + + KPY+C C
Sbjct: 371 NL-----KTHLRSHTGEKPYVCDHEGCN--KAFSNASDRAKHQNRTHSNEKPYICKVPGC 423
Query: 375 TKRYTDPSSLRKHIKTVHAP 394
TKRYTDPSSLRKH+KTVH P
Sbjct: 424 TKRYTDPSSLRKHVKTVHGP 443
>sp|P55879|GLI2_CHICK Zinc finger protein GLI2 (Fragment) OS=Gallus gallus GN=GLI2 PE=2
SV=1
Length = 663
Score = 223 bits (567), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 153/386 (39%), Positives = 194/386 (50%), Gaps = 57/386 (14%)
Query: 43 EFPFPLDGSRLLASPRSHLKQNRKRALSASPYSDSIADIHTMIRFSPNSLVNSLVNSTAS 102
E+ P+D SR +SPR + +RKRALS SP SD+ D+ TMIR SPNSLV + NS +S
Sbjct: 26 EYLSPVDVSRF-SSPRVTPRLSRKRALSISPLSDASIDLQTMIRTSPNSLVAYINNSRSS 84
Query: 103 SRSGGSYGHLSAGALSPAL---HPSMTPHLQQLQAHLLRSGGLLPPQPPFYHPHALSPLN 159
S + GSYGHLSAG +SPA HP QQ+ PP P P
Sbjct: 85 SAASGSYGHLSAGTISPAFSFPHPINPVTYQQILTQQRGLSSAFGHTPPLIQPSPTFPPR 144
Query: 160 SDLHSTKLGDKEAKVRAEAD---------------TSSMGGGASWKPMKIKRETKQHSPE 204
+ + A++ + ++ SS K K+K E + P+
Sbjct: 145 QHMAVISVNPPPAQISSNSNCISDSSQSKQSSESAVSSTVNPVINKRTKVKTEV-EGLPQ 203
Query: 205 SPAGD----------------KYEPGDFVETNCHWKDCGLEFGTQDILVKHINNDHIHAN 248
P K EP ETNCHW+ C E+ TQ+ LV HINNDHIH
Sbjct: 204 YPQPRQEHLTDLKEDLDKDECKQEPEVIYETNCHWEGCTKEYDTQEQLVHHINNDHIHGE 263
Query: 249 KKSFICRWEDCTRDEKPFKAQYMLVVHMRRHTGEKPHKCTDLEAFDTSSRVAARRIRGWK 308
KK F+CRW+DCTR++KPFKAQYMLVVHMRRHTGEKPHKCT F+ S+ +
Sbjct: 264 KKEFVCRWQDCTREQKPFKAQYMLVVHMRRHTGEKPHKCT----FEGCSKAYS------- 312
Query: 309 ISRRISDLIPVRNRTRVNILAVVKRLVMRRIELNIRTELTLMSLNVQFEILSRPKLKPYV 368
R+ +L +T + K V N + S + + + KPYV
Sbjct: 313 ---RLENL-----KTHLRSHTGEKPYVCEHEGCN--KAFSNASDRAKHQNRTHSNEKPYV 362
Query: 369 CGEENCTKRYTDPSSLRKHIKTVHAP 394
C CTKRYTDPSSLRKH+KTVH P
Sbjct: 363 CKIPGCTKRYTDPSSLRKHVKTVHGP 388
>sp|Q0VGT2|GLI2_MOUSE Zinc finger protein GLI2 OS=Mus musculus GN=Gli2 PE=1 SV=2
Length = 1544
Score = 221 bits (564), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 159/386 (41%), Positives = 199/386 (51%), Gaps = 60/386 (15%)
Query: 47 PLDGSRLLASPRSHLKQNRKRALSASPYSDSIADIHTMIRFSPNSLVNSLVNSTASSRSG 106
P+D SR +SPR + +RKRALS SP SD+ D+ MIR SPNSLV + NS +SS +
Sbjct: 208 PVDASRF-SSPRVTPRLSRKRALSISPLSDASLDLQRMIRTSPNSLVAYINNSRSSSAAS 266
Query: 107 GSYGHLSAGALSPAL---HPSMTPHLQQLQAHLLRSGGLLPPQPPFYHPH----ALSPLN 159
GSYGHLSAGALSPA HP QQ+ + G PP P A P+
Sbjct: 267 GSYGHLSAGALSPAFTFPHPINPVAYQQILSQQRGLGSAFGHTPPLIQPSPTFLAQQPMT 326
Query: 160 SDLHSTK-----------LGD-KEAKVRAEADTSSMGGGASW-KPMKIKRETKQHSPESP 206
ST L D + K +E+ SS + K K+K E + P SP
Sbjct: 327 LTSISTMPTQLSSSSSNCLNDANQNKQNSESAVSSTVNPITIHKRSKVKTEAEGLRPASP 386
Query: 207 AG----------------DKYEPGDFV--ETNCHWKDCGLEFGTQDILVKHINNDHIHAN 248
G D + + V ETNCHW DC E+ TQ+ LV HINN+HIH
Sbjct: 387 LGLTQEQLADLKEDLDRDDCKQEAEVVIYETNCHWADCTKEYDTQEQLVHHINNEHIHGE 446
Query: 249 KKSFICRWEDCTRDEKPFKAQYMLVVHMRRHTGEKPHKCTDLEAFDTSSRVAARRIRGWK 308
KK F+CRW+ CTR++KPFKAQYMLVVHMRRHTGEKPHKCT F+ S+ +
Sbjct: 447 KKEFVCRWQACTREQKPFKAQYMLVVHMRRHTGEKPHKCT----FEGCSKAYS------- 495
Query: 309 ISRRISDLIPVRNRTRVNILAVVKRLVMRRIELNIRTELTLMSLNVQFEILSRPKLKPYV 368
R+ +L +T + K V N + S + + + KPY+
Sbjct: 496 ---RLENL-----KTHLRSHTGEKPYVCEHEGCN--KAFSNASDRAKHQNRTHSNEKPYI 545
Query: 369 CGEENCTKRYTDPSSLRKHIKTVHAP 394
C CTKRYTDPSSLRKH+KTVH P
Sbjct: 546 CKIPGCTKRYTDPSSLRKHVKTVHGP 571
>sp|P55878|GLI1_CHICK Zinc finger protein GLI1 (Fragment) OS=Gallus gallus GN=GLI1 PE=2
SV=1
Length = 556
Score = 219 bits (557), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 146/372 (39%), Positives = 188/372 (50%), Gaps = 61/372 (16%)
Query: 49 DGSRLLASPRSHLKQNRKRALSASPYSDSIADIHTMIRFSPNSLVNSLVNSTASSRSGGS 108
DGSR ++PR K +KRALS SP SDS D+ T+IR SPNSLV + +NS +S +GGS
Sbjct: 65 DGSRF-STPRGAGKLGKKRALSISPLSDSSVDLQTVIRTSPNSLV-AFINSRCAS-AGGS 121
Query: 109 YGHLSAGALSPALHPSMTPHLQQLQAHLLRSGGLLPPQPPFYHPHALSPLNSDLH----- 163
YGHLS +SP+L P Q+ Q L PP PP LS LH
Sbjct: 122 YGHLSISTISPSLGYQNPPGQQKGQGQLFSH---TPPLPPCSSHETLSSRPGLLHPTPAR 178
Query: 164 ---------------STKLGDKEAKVRAEADTSSMGGGASWKPM------KIKRETKQHS 202
S+ L K + ++E D SS + P+ + E +
Sbjct: 179 GTIKHCQQLKLERSLSSPLTAKYPEEKSEGDISSPASTGTQDPLLGMLSVRDDLEKEDGK 238
Query: 203 PESPAGDKYEPGDFVETNCHWKDCGLEFGTQDILVKHINNDHIHANKKSFICRWEDCTRD 262
PES ETNC+W C EF TQ+ LV HINN+HIH KK F+C W C+R+
Sbjct: 239 PESET--------IYETNCYWDGCAKEFDTQEQLVHHINNEHIHGEKKEFVCHWAACSRE 290
Query: 263 EKPFKAQYMLVVHMRRHTGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNR 322
++PFKAQYMLVVHMRRHTGEKPHKCT F+ ++ + R+ +L +
Sbjct: 291 QRPFKAQYMLVVHMRRHTGEKPHKCT----FEGCNKAYS----------RLENL-----K 331
Query: 323 TRVNILAVVKRLVMRRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPS 382
T + K V N + S + + + KPY+C CTKRYTDPS
Sbjct: 332 THLRSHTGEKPYVCEHEGCN--KAFSNASDRAKHQNRTHSNEKPYICKIPGCTKRYTDPS 389
Query: 383 SLRKHIKTVHAP 394
SLRKH+KTVH P
Sbjct: 390 SLRKHVKTVHGP 401
>sp|P10070|GLI2_HUMAN Zinc finger protein GLI2 OS=Homo sapiens GN=GLI2 PE=1 SV=4
Length = 1586
Score = 218 bits (555), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 176/461 (38%), Positives = 222/461 (48%), Gaps = 104/461 (22%)
Query: 16 LTSEYLGSRGLSDLPPPPTATS----------------------SIGSAEFPF------P 47
+ E+L RGL LP P T S S G+A P P
Sbjct: 153 VAQEHLKERGLFGLPAPGTTPSDYYHQMTLVAGHPAPYGDLLMQSGGAASAPHLHDYLNP 212
Query: 48 LDGSRLLASPRSHLKQNRKRALSASPYSDSIADIHTMIRFSPNSLVNSLVNSTASSRSGG 107
+D SR +SPR + +RKRALS SP SD+ D+ MIR SPNSLV + NS +SS + G
Sbjct: 213 VDVSRF-SSPRVTPRLSRKRALSISPLSDASLDLQRMIRTSPNSLVAYINNSRSSSAASG 271
Query: 108 SYGHLSAGALSPAL---HPSMTPHLQQL---QAHLLRSGG----LLPPQPPFY--HPHAL 155
SYGHLSAGALSPA HP QQ+ Q L + G L+ P P F P AL
Sbjct: 272 SYGHLSAGALSPAFTFPHPINPVAYQQILSQQRGLGSAFGHTPPLIQPSPTFLAQQPMAL 331
Query: 156 SPLNS-----DLHSTKLGD--KEAKVRAEADTSSMGGGASWKPMKIKRETKQHSPESPAG 208
+ +N+ S L D + + A +S++ A K K+K E + P SP
Sbjct: 332 TSINATPTQLSSSSNCLSDTNQNKQSSESAVSSTVNPVAIHKRSKVKTEPEGLRPASPLA 391
Query: 209 ---------------------------------DKYEPGDFV--ETNCHWKDCGLEFGTQ 233
D + + V ETNCHW+DC E+ TQ
Sbjct: 392 LTQGQVSGHGSCGCALPLSQEQLADLKEDLDRDDCKQEAEVVIYETNCHWEDCTKEYDTQ 451
Query: 234 DILVKHINNDHIHANKKSFICRWEDCTRDEKPFKAQYMLVVHMRRHTGEKPHKCTDLEAF 293
+ LV HINN+HIH KK F+CRW+ CTR++KPFKAQYMLVVHMRRHTGEKPHKCT F
Sbjct: 452 EQLVHHINNEHIHGEKKEFVCRWQACTREQKPFKAQYMLVVHMRRHTGEKPHKCT----F 507
Query: 294 DTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVMRRIELNIRTELTLMSLN 353
+ S K R+ +L +T + K V N + S
Sbjct: 508 EGCS----------KAYSRLENL-----KTHLRSHTGEKPYVCEHEGCN--KAFSNASDR 550
Query: 354 VQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKTVHAP 394
+ + + KPY+C CTKRYTDPSSLRKH+KTVH P
Sbjct: 551 AKHQNRTHSNEKPYICKIPGCTKRYTDPSSLRKHVKTVHGP 591
>sp|P08151|GLI1_HUMAN Zinc finger protein GLI1 OS=Homo sapiens GN=GLI1 PE=1 SV=1
Length = 1106
Score = 212 bits (539), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 142/358 (39%), Positives = 186/358 (51%), Gaps = 51/358 (14%)
Query: 53 LLASPRSHLKQNRKRALSASPYSDSIADIHTMIRFSPNSLVNSLVNSTASSRSGGSYGHL 112
L +SPRS +K +KRALS SP SD+ D+ T+IR SP+SLV + +NS +S GGSYGHL
Sbjct: 67 LFSSPRSAVKLTKKRALSISPLSDASLDLQTVIRTSPSSLV-AFINSRCTS-PGGSYGHL 124
Query: 113 SAGALSPALH----------PSMTPHLQQLQAHLLRSGGLLPPQPPFYHPHALSPLNSDL 162
S G +SP+L PS + +Q H GG++P HP + P +
Sbjct: 125 SIGTMSPSLGFPAQMNHQKGPSPSFGVQPCGPHDSARGGMIP------HPQSRGPFPTCQ 178
Query: 163 HSTKLGDKEAKVRAE---ADTSSMGGGASWKP---MKIKRETKQHSPESPAGDKYEPGDF 216
++L K R E D SS P M RE + +K EP
Sbjct: 179 LKSELDMLVGKCREEPLEGDMSSPNSTGIQDPLLGMLDGREDLERE------EKREPESV 232
Query: 217 VETNCHWKDCGLEFGTQDILVKHINNDHIHANKKSFICRWEDCTRDEKPFKAQYMLVVHM 276
ET+C W C EF +Q+ LV HIN++HIH +K F+C W C+R+ +PFKAQYMLVVHM
Sbjct: 233 YETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM 292
Query: 277 RRHTGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVM 336
RRHTGEKPHKCT F+ R + R+ K +R+ T ++ M
Sbjct: 293 RRHTGEKPHKCT----FE-GCRKSYSRLENLKTH--------LRSHTG-------EKPYM 332
Query: 337 RRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKTVHAP 394
E + S + + + KPYVC CTKRYTDPSSLRKH+KTVH P
Sbjct: 333 CEHE-GCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHGP 389
>sp|P47806|GLI1_MOUSE Zinc finger protein GLI1 OS=Mus musculus GN=Gli1 PE=1 SV=4
Length = 1111
Score = 194 bits (492), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 137/357 (38%), Positives = 181/357 (50%), Gaps = 59/357 (16%)
Query: 58 RSHLKQNRKRALSASPYSDSIADIHTMIRFSPNSLVNSLVNSTASSRSGGSYGHLSAGAL 117
RS +K +KRALS SP SD+ D+ T+IR SP+SLV + +NS +S GGSYGHLS G +
Sbjct: 75 RSSVKLTKKRALSISPLSDASLDLQTVIRTSPSSLV-AFINSRCTS-PGGSYGHLSIGTM 132
Query: 118 SPALHPSMTPHLQQLQAHLLRSGGLLPP---QPPFYHPHALSPLNSDLHSTKLGDKEAKV 174
SP+L P + + G PP QP PH + + LH G + A
Sbjct: 133 SPSL--GFPPQMSHQK-------GTSPPYGVQPCV--PHDSTRGSMMLHPQSRGPR-ATC 180
Query: 175 RAEADTSSMGGGASWKPMKIKRETKQHSPESPAG-----------------DKYEPGDFV 217
+ +++ M G P+ E SP S +K EP
Sbjct: 181 QLKSELDMMVGKCPEDPL----EGDMSSPNSTGTQDHLLGMLDGREDLEREEKPEPESVY 236
Query: 218 ETNCHWKDCGLEFGTQDILVKHINNDHIHANKKSFICRWEDCTRDEKPFKAQYMLVVHMR 277
ET+C W C EF +Q+ LV HIN++HIH +K F+C W C+R+ +PFKAQYMLVVHMR
Sbjct: 237 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 296
Query: 278 RHTGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVMR 337
RHTGEKPHKCT F+ R + R+ K +R+ T ++ M
Sbjct: 297 RHTGEKPHKCT----FE-GCRKSYSRLENLKTH--------LRSHTG-------EKPYMC 336
Query: 338 RIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKTVHAP 394
E + S + + + KPYVC CTKRYTDPSSLRKH+KTVH P
Sbjct: 337 EQE-GCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHGP 392
>sp|P19538|CI_DROME Transcriptional activator cubitus interruptus OS=Drosophila
melanogaster GN=ci PE=1 SV=2
Length = 1397
Score = 191 bits (484), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 121/211 (57%), Gaps = 26/211 (12%)
Query: 210 KYEPGDFVETNCHWKDCGLEFGTQDILVKHINNDHIHANKKSFICRWEDCTRDEKPFKAQ 269
K EPGDF+ETNCHW+ C +EF TQD LVKHINNDHI NKK+F+CRWEDCTR EKPFKAQ
Sbjct: 442 KDEPGDFIETNCHWRSCRIEFITQDELVKHINNDHIQTNKKAFVCRWEDCTRGEKPFKAQ 501
Query: 270 YMLVVHMRRHTGEKPHKCTDLEAFDTSSRVAARR--IRGWKISRRISDLIPVRNRTRVNI 327
YMLVVHMRRHTGEKPHKCT F SR+ + +R + + P ++ N
Sbjct: 502 YMLVVHMRRHTGEKPHKCTFEGCFKAYSRLENLKTHLRSHTGEKPYTCEYPGCSKAFSN- 560
Query: 328 LAVVKRLVMRRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKH 387
S + + + KPY+C CTKRYTDPSSLRKH
Sbjct: 561 ----------------------ASDRAKHQNRTHSNEKPYICKAPGCTKRYTDPSSLRKH 598
Query: 388 IKTVHAPASLNPVPQHKDMQDIQSNEVTQSN 418
+KTVH A +HK + +N Q N
Sbjct: 599 VKTVHG-AEFYANKKHKGLPLNDANSRLQQN 628
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 55/101 (54%), Gaps = 22/101 (21%)
Query: 399 PVPQHKDMQDIQSNEVTQSNMRQSTYQRTLEYVEQCQNWVSSST------QPAPAGP--- 449
P PQ K + D Q++ S M TYQRTLEYV+ CQNW+ ++ Q P P
Sbjct: 1300 PEPQ-KIVCDTQASNT--SVMHLDTYQRTLEYVQSCQNWMETNNTSTNQIQSLPGMPVNN 1356
Query: 450 ---PSAATG-------NMVINDRNTSLSSLLEENRFFQMSQ 480
P ++ NMVIND TSL+SLLEENR+ QM Q
Sbjct: 1357 TLFPDVSSSTHPYHGTNMVINDMTTSLTSLLEENRYLQMMQ 1397
>sp|Q17308|TRA1_CAEBR Sex-determining transformer protein 1 OS=Caenorhabditis briggsae
GN=tra-1 PE=1 SV=1
Length = 1165
Score = 103 bits (258), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 84/177 (47%), Gaps = 27/177 (15%)
Query: 221 CHWKDCGLEFGTQDILVKHINNDHIHANKK---SFICRWEDCTRDEKPFKAQYMLVVHMR 277
C WKDC L+F LV+H+ H+ + ++ ++ C WE C R+E FKA YML+VH+R
Sbjct: 228 CRWKDCMLKFANLKGLVEHVQEKHVQSTEQEHHAWRCEWEGCDRNET-FKALYMLIVHVR 286
Query: 278 RHTGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRI-SDLIPVRNRTRVNILAVVKRLVM 336
RHTGEKP+KC S R+ K RR + P +
Sbjct: 287 RHTGEKPNKCEYPGCGKEYS-----RLENLKTHRRTHTGEKPYKCEFS------------ 329
Query: 337 RRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKTVHA 393
+ + S + + + LKPY C C K YTDPSSLRKHIK VH
Sbjct: 330 -----DCEKAFSNASDRAKHQNRTHSNLKPYSCQIGGCQKSYTDPSSLRKHIKAVHG 381
>sp|P34708|TRA1_CAEEL Sex-determining transformer protein 1 OS=Caenorhabditis elegans
GN=tra-1 PE=1 SV=1
Length = 1110
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 68/207 (32%), Positives = 92/207 (44%), Gaps = 27/207 (13%)
Query: 191 PMKIKRETKQHSPESPAGDKYEPGDFVETNCHWKDCGLEFGTQDILVKHINNDHIHANKK 250
P KR + S +G+ + + C WK C F T LV H+ H+ + ++
Sbjct: 180 PGTFKRPQNNAANSSNSGNDSDMMGDHDLTCRWKSCNSSFQTLKALVDHVQESHVQSTEQ 239
Query: 251 ---SFICRWEDCTRDEKPFKAQYMLVVHMRRHTGEKPHKCTDLEAFDTSSRVAARRIRGW 307
++ C WE C R+E FKA YML+VH+RRHTGEKP+KC S R+
Sbjct: 240 EHHAWRCEWEGCDRNET-FKALYMLIVHVRRHTGEKPNKCEYPGCGKEYS-----RLENL 293
Query: 308 KISRRI-SDLIPVRNRTRVNILAVVKRLVMRRIELNIRTELTLMSLNVQFEILSRPKLKP 366
K RR + P + + + S + + + LKP
Sbjct: 294 KTHRRTHTGEKPYKCEF-----------------ADCEKAFSNASDRAKHQNRTHSNLKP 336
Query: 367 YVCGEENCTKRYTDPSSLRKHIKTVHA 393
Y C CTK YTDPSSLRKHIK VH
Sbjct: 337 YSCQIPQCTKSYTDPSSLRKHIKAVHG 363
>sp|Q6XP49|GLIS3_MOUSE Zinc finger protein GLIS3 OS=Mus musculus GN=Glis3 PE=2 SV=2
Length = 780
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 79/174 (45%), Gaps = 31/174 (17%)
Query: 221 CHWKDCGLEFGTQDILVKHINNDHIHANK-KSFICRWEDCTRDEKPFKAQYMLVVHMRRH 279
C W DC + Q+ LV+HI HI K + F C W C R KPF A+Y L++HMR H
Sbjct: 347 CRWIDCSALYDQQEELVRHIEKVHIDQRKGEDFTCFWTGCPRRYKPFNARYKLLIHMRVH 406
Query: 280 TGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRI----SDLIPVRNRTRVNILAVVKRLV 335
+GEKP+KCT F+ + A R+ KI R + + R
Sbjct: 407 SGEKPNKCT----FEGCKK-AFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAK 461
Query: 336 MRRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIK 389
+R L+ KPY C CTKRYTDPSSLRKH+K
Sbjct: 462 HQRTHLDT---------------------KPYACQIPGCTKRYTDPSSLRKHVK 494
Score = 40.8 bits (94), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 58 RSHLKQNRKRALSASPYSDSIA-DIHTMIRFSPNSLVNSLVNSTAS----SRSGGSYGHL 112
R+H +++KRALS SP SD I D +T+IR SP SLV + AS S YGH
Sbjct: 138 RAHSTRSKKRALSLSPLSDGIGIDFNTIIRTSPTSLVAYINGPRASPANLSPQSEVYGHF 197
>sp|Q8NEA6|GLIS3_HUMAN Zinc finger protein GLIS3 OS=Homo sapiens GN=GLIS3 PE=2 SV=5
Length = 775
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 62/174 (35%), Positives = 79/174 (45%), Gaps = 31/174 (17%)
Query: 221 CHWKDCGLEFGTQDILVKHINNDHIHANK-KSFICRWEDCTRDEKPFKAQYMLVVHMRRH 279
C W DC + Q+ LV+HI HI K + F C W C R KPF A+Y L++HMR H
Sbjct: 347 CRWIDCSALYDQQEELVRHIEKVHIDQRKGEDFTCFWAGCPRRYKPFNARYKLLIHMRVH 406
Query: 280 TGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRI----SDLIPVRNRTRVNILAVVKRLV 335
+GEKP+KCT F+ + A R+ KI R + + R
Sbjct: 407 SGEKPNKCT----FEGCEK-AFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAK 461
Query: 336 MRRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIK 389
+R L+ KPY C CTKRYTDPSSLRKH+K
Sbjct: 462 HQRTHLDT---------------------KPYACQIPGCTKRYTDPSSLRKHVK 494
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 55 ASPRSHLKQNRKRALSASPYSDSIA-DIHTMIRFSPNSLVNSLVNSTAS 102
+S RSH +++KRALS SP SD I D +T+IR SP SLV + S AS
Sbjct: 134 SSTRSHSARSKKRALSLSPLSDGIGIDFNTIIRTSPTSLVAYINGSRAS 182
>sp|Q8K1M4|GLIS1_MOUSE Zinc finger protein GLIS1 OS=Mus musculus GN=Glis1 PE=2 SV=2
Length = 789
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 79/175 (45%), Gaps = 31/175 (17%)
Query: 221 CHWKDCGLEFGTQDILVKHINNDHIHANK-KSFICRWEDCTRDEKPFKAQYMLVVHMRRH 279
C W DC + Q+ LV+HI HI K + F C W C R KPF A+Y L++HMR H
Sbjct: 368 CRWVDCCAAYEQQEELVRHIEKSHIDQRKGEDFTCFWAGCVRRYKPFNARYKLLIHMRVH 427
Query: 280 TGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRI----SDLIPVRNRTRVNILAVVKRLV 335
+GEKP+KC F+ S+ A R+ KI R + + R
Sbjct: 428 SGEKPNKCM----FEGCSK-AFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAK 482
Query: 336 MRRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKT 390
+R L+ KPY C C+KRYTDPSSLRKH+K
Sbjct: 483 HQRTHLDT---------------------KPYACQIPGCSKRYTDPSSLRKHVKA 516
>sp|Q8NBF1|GLIS1_HUMAN Zinc finger protein GLIS1 OS=Homo sapiens GN=GLIS1 PE=2 SV=2
Length = 620
Score = 99.4 bits (246), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 79/175 (45%), Gaps = 31/175 (17%)
Query: 221 CHWKDCGLEFGTQDILVKHINNDHIHANK-KSFICRWEDCTRDEKPFKAQYMLVVHMRRH 279
C W DC + Q+ LV+HI HI K + F C W C R KPF A+Y L++HMR H
Sbjct: 197 CRWVDCCAAYEQQEELVRHIEKSHIDQRKGEDFTCFWAGCVRRYKPFNARYKLLIHMRVH 256
Query: 280 TGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRI----SDLIPVRNRTRVNILAVVKRLV 335
+GEKP+KC F+ S+ A R+ KI R + + R
Sbjct: 257 SGEKPNKCM----FEGCSK-AFSRLENLKIHLRSHTGEKPYLCQHPGCQKAFSNSSDRAK 311
Query: 336 MRRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKT 390
+R L+ KPY C C+KRYTDPSSLRKH+K
Sbjct: 312 HQRTHLDT---------------------KPYACQIPGCSKRYTDPSSLRKHVKA 345
>sp|Q7TQ40|ZIC5_MOUSE Zinc finger protein ZIC 5 OS=Mus musculus GN=Zic5 PE=1 SV=1
Length = 622
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 224 KDCGLEFGTQDILVKHINNDHIHA-NKKSFICRWEDCTRDEKPFKAQYMLVVHMRRHTGE 282
K C FGT LV H+ +H+ + S +C WEDC R+ KPFKA+Y L+ H+R HTGE
Sbjct: 388 KPCSKTFGTMHELVNHVTVEHVGGPEQSSHVCFWEDCPREGKPFKAKYKLINHIRVHTGE 447
Query: 283 KPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVMRRIELN 342
KP C F +V AR S+ + + RT + E +
Sbjct: 448 KPFPCP----FPGCGKVFAR-----------SENLKIHKRTHTGEKPF-------KCEFD 485
Query: 343 IRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIK 389
S + + KPY C C K YT PSSLRKH+K
Sbjct: 486 GCDRKFANSSDRKKHSHVHTSDKPYYCKIRGCDKSYTHPSSLRKHMK 532
>sp|Q96T25|ZIC5_HUMAN Zinc finger protein ZIC 5 OS=Homo sapiens GN=ZIC5 PE=1 SV=2
Length = 663
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 75/167 (44%), Gaps = 23/167 (13%)
Query: 224 KDCGLEFGTQDILVKHINNDHIHA-NKKSFICRWEDCTRDEKPFKAQYMLVVHMRRHTGE 282
K C FGT LV H+ +H+ + S +C WEDC R+ KPFKA+Y L+ H+R HTGE
Sbjct: 429 KPCSKTFGTMHELVNHVTVEHVGGPEQSSHVCFWEDCPREGKPFKAKYKLINHIRVHTGE 488
Query: 283 KPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVMRRIELN 342
KP C F +V AR S+ + + RT + E +
Sbjct: 489 KPFPCP----FPGCGKVFAR-----------SENLKIHKRTHTGEKPF-------KCEFD 526
Query: 343 IRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIK 389
S + + KPY C C K YT PSSLRKH+K
Sbjct: 527 GCDRKFANSSDRKKHSHVHTSDKPYYCKIRGCDKSYTHPSSLRKHMK 573
>sp|Q7K0S9|GLIS2_DROME Zinc finger protein GLIS2 homolog OS=Drosophila melanogaster GN=sug
PE=2 SV=1
Length = 384
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 75/179 (41%), Gaps = 29/179 (16%)
Query: 215 DFVETNCHWKDCGLEFGTQDILVKHINNDHIHANKKS--FICRWEDCTRDEKPFKAQYML 272
DFV C+W DC F T D L +H+ H A+ + CRW C R E+ F A+Y +
Sbjct: 127 DFV---CNWTDCDRVFDTLDALAQHVTQRHAIASLTDGLYYCRWRGCQRSERGFNARYKM 183
Query: 273 VVHMRRHTGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVK 332
+VH R HT EKPH+C E + + IR + + N K
Sbjct: 184 LVHTRTHTKEKPHRCHLCEKSFSRAENLKIHIRSHSGEKPYKCSFEGCQKAYSNSSDRFK 243
Query: 333 RLVMRRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKTV 391
+E KPY+C C KRYTDPSSLRKH+KT
Sbjct: 244 HTRTHSME------------------------KPYMCKVAGCQKRYTDPSSLRKHVKTF 278
>sp|Q9IB89|ZIC5_XENLA Zinc finger protein ZIC 5 OS=Xenopus laevis GN=zic5 PE=2 SV=1
Length = 515
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 78/181 (43%), Gaps = 31/181 (17%)
Query: 218 ETNCHWKD--------CGLEFGTQDILVKHINNDHIHANKKS-FICRWEDCTRDEKPFKA 268
E C W D C F T LV H+ +H+ ++S IC WE+C R+ KPFKA
Sbjct: 266 ELICKWIDQDQSSKKPCSKTFSTMHELVNHVAVEHVGGPEQSNHICFWEECAREGKPFKA 325
Query: 269 QYMLVVHMRRHTGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNIL 328
+Y LV H+R HTGEKP C F +V AR S+ + + RT
Sbjct: 326 KYKLVNHIRVHTGEKPFPC----PFPGCGKVFAR-----------SENLKIHKRTHTGEK 370
Query: 329 AVVKRLVMRRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHI 388
+ E + S + + KPY C C K YT PSSLRKH+
Sbjct: 371 PF-------KCEFDGCDRKFANSSDRKKHSHVHTSDKPYYCKVRGCDKSYTHPSSLRKHM 423
Query: 389 K 389
K
Sbjct: 424 K 424
>sp|Q9BZE0|GLIS2_HUMAN Zinc finger protein GLIS2 OS=Homo sapiens GN=GLIS2 PE=1 SV=2
Length = 524
Score = 86.3 bits (212), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 73/173 (42%), Gaps = 29/173 (16%)
Query: 221 CHWKDCGLEFGTQDILVKHINNDHIHANKKS-FICRWEDCTRDEKPFKAQYMLVVHMRRH 279
C W C F LV H+N+ H+ K + + C WE C R + F A+Y +++H+R H
Sbjct: 170 CRWAKCNQLFELLQDLVDHVNDYHVKPEKDAGYCCHWEGCARHGRGFNARYKMLIHIRTH 229
Query: 280 TGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVR--NRTRVNILAVVKRLVMR 337
T EKPH+C + SR+ +I + + P N+ N K
Sbjct: 230 TNEKPHRCPTCS--KSFSRLENLKIHNRSHTGEKPYVCPYEGCNKRYSNSSDRFKHTRTH 287
Query: 338 RIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKT 390
++ KPY C C KRYTDPSSLRKHIK
Sbjct: 288 YVD------------------------KPYYCKMPGCHKRYTDPSSLRKHIKA 316
>sp|Q15915|ZIC1_HUMAN Zinc finger protein ZIC 1 OS=Homo sapiens GN=ZIC1 PE=2 SV=2
Length = 447
Score = 85.9 bits (211), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 125/300 (41%), Gaps = 60/300 (20%)
Query: 106 GGSYGHLSAGA--LSPALHPSM----TPHLQQLQAHLLRSGGLLPPQPPFYHPHALSPLN 159
GG +GH A L P LH +P++ Q L SG + P P + SP +
Sbjct: 129 GGPHGHTDAAGHLLFPGLHEQAAGHASPNVVNGQMRLGFSGDMYPR--PEQYGQVTSPRS 186
Query: 160 SDLHSTKL-GDKEAKVRAEADTSSMGGGASWKPMK--IKRE--TKQHSPESPAGDKYEPG 214
+ +L G V A G GA ++ M+ IK+E K PE A K
Sbjct: 187 EHYAAPQLHGYGPMNVNMAAH---HGAGAFFRYMRQPIKQELICKWIEPEQLANPK---- 239
Query: 215 DFVETNCHWKDCGLEFGTQDILVKHINNDHIHANKKS-FICRWEDCTRDEKPFKAQYMLV 273
K C F T LV H+ +H+ ++S IC WE+C R+ KPFKA+Y LV
Sbjct: 240 ---------KSCNKTFSTMHELVTHVTVEHVGGPEQSNHICFWEECPREGKPFKAKYKLV 290
Query: 274 VHMRRHTGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKR 333
H+R HTGEKP C F +V AR KI +R + +R
Sbjct: 291 NHIRVHTGEKPFPC----PFPGCGKVFARS-ENLKIHKRTHT---GEKPFKCEFEGCDRR 342
Query: 334 LVM---RRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKT 390
R+ +++ T KPY+C + C K YT PSSLRKH+K
Sbjct: 343 FANSSDRKKHMHVHTS-----------------DKPYLC--KMCDKSYTHPSSLRKHMKV 383
>sp|O95409|ZIC2_HUMAN Zinc finger protein ZIC 2 OS=Homo sapiens GN=ZIC2 PE=1 SV=2
Length = 532
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 79/171 (46%), Gaps = 31/171 (18%)
Query: 224 KDCGLEFGTQDILVKHINNDHIHANKKS-FICRWEDCTRDEKPFKAQYMLVVHMRRHTGE 282
K C F T LV H++ +H+ ++S +C WE+C R+ KPFKA+Y LV H+R HTGE
Sbjct: 271 KSCNKTFSTMHELVTHVSVEHVGGPEQSNHVCFWEECPREGKPFKAKYKLVNHIRVHTGE 330
Query: 283 KPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVM---RRI 339
KP C F +V AR KI +R + +R R+
Sbjct: 331 KPFPCP----FPGCGKVFARS-ENLKIHKRTHT---GEKPFQCEFEGCDRRFANSSDRKK 382
Query: 340 ELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKT 390
+++ T KPY+C + C K YT PSSLRKH+K
Sbjct: 383 HMHVHT-----------------SDKPYLC--KMCDKSYTHPSSLRKHMKV 414
Score = 36.2 bits (82), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 33/97 (34%)
Query: 221 CHWKDC---GLEFGTQDILVKHINNDHIHANKKSFICRWEDCTR---------------- 261
C W++C G F + LV HI +H +K F C + C +
Sbjct: 302 CFWEECPREGKPFKAKYKLVNHIR---VHTGEKPFPCPFPGCGKVFARSENLKIHKRTHT 358
Query: 262 DEKPFKAQYMLV-----------VHMRRHTGEKPHKC 287
EKPF+ ++ HM HT +KP+ C
Sbjct: 359 GEKPFQCEFEGCDRRFANSSDRKKHMHVHTSDKPYLC 395
>sp|Q8VDL9|GLIS2_MOUSE Zinc finger protein GLIS2 OS=Mus musculus GN=Glis2 PE=1 SV=1
Length = 521
Score = 85.5 bits (210), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 73/173 (42%), Gaps = 29/173 (16%)
Query: 221 CHWKDCGLEFGTQDILVKHINNDHIHANKKS-FICRWEDCTRDEKPFKAQYMLVVHMRRH 279
C W C F LV H+N+ H+ + + + C WE C R + F A+Y +++H+R H
Sbjct: 170 CRWAKCNQLFELLQDLVDHVNDHHVKPEQDARYCCHWEGCARHGRGFNARYKMLIHIRTH 229
Query: 280 TGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVR--NRTRVNILAVVKRLVMR 337
T EKPH+C + SR+ +I + + P N+ N K
Sbjct: 230 TNEKPHRCPTCN--KSFSRLENLKIHNRSHTGEKPYVCPYEGCNKRYSNSSDRFKHTRTH 287
Query: 338 RIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKT 390
++ KPY C C KRYTDPSSLRKHIK
Sbjct: 288 YVD------------------------KPYYCKMPGCHKRYTDPSSLRKHIKA 316
>sp|Q9YIB7|ZIC2B_XENLA Zinc finger protein ZIC 2-B OS=Xenopus laevis GN=zic2-b PE=2 SV=1
Length = 497
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 79/171 (46%), Gaps = 31/171 (18%)
Query: 224 KDCGLEFGTQDILVKHINNDHIHANKKS-FICRWEDCTRDEKPFKAQYMLVVHMRRHTGE 282
K C F T LV H++ +H+ ++S IC WE+C R+ KPFKA+Y LV H+R HTGE
Sbjct: 288 KSCNKTFSTMHELVTHMSVEHVGGPEQSNHICFWEECAREGKPFKAKYKLVNHIRVHTGE 347
Query: 283 KPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVM---RRI 339
KP C F +V AR KI +R + +R R+
Sbjct: 348 KPFPC----PFPGCGKVFARS-ENLKIHKRTHT---GEKPFQCEFEGCDRRFANSSDRKK 399
Query: 340 ELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKT 390
+++ T KPY+C + C K YT PSSLRKH+K
Sbjct: 400 HMHVHT-----------------SDKPYLC--KMCDKSYTHPSSLRKHMKV 431
Score = 36.2 bits (82), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 35/94 (37%), Gaps = 27/94 (28%)
Query: 221 CHWKDCGLEFGTQDILVKHINNDHIHANKKSFICRWEDCTR----------------DEK 264
C W++C E K +N+ +H +K F C + C + EK
Sbjct: 319 CFWEECAREGKPFKAKYKLVNHIRVHTGEKPFPCPFPGCGKVFARSENLKIHKRTHTGEK 378
Query: 265 PFKAQYMLV-----------VHMRRHTGEKPHKC 287
PF+ ++ HM HT +KP+ C
Sbjct: 379 PFQCEFEGCDRRFANSSDRKKHMHVHTSDKPYLC 412
>sp|A0JC51|ZIC4_XENLA Zinc finger protein ZIC 4 OS=Xenopus laevis GN=zic4 PE=2 SV=1
Length = 530
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 78/185 (42%), Gaps = 37/185 (20%)
Query: 218 ETNCHW--------KDCGLEFGTQDILVKHINNDHIHANKKS-FICRWEDCTRDEKPFKA 268
E C W K C F T LV H+ +H+ ++S IC WE+C R+ KPFKA
Sbjct: 283 ELICKWIEEDQLPKKLCSKTFSTMHELVTHVTVEHVGGPEQSNHICFWEECPREGKPFKA 342
Query: 269 QYMLVVHMRRHTGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNIL 328
+Y LV H+R HTGEKP C F +V AR KI +R +
Sbjct: 343 KYKLVNHIRVHTGEKPFPC----PFPGCGKVFARS-ENLKIHKRTHT---GEKPFKCEFE 394
Query: 329 AVVKRLVM---RRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLR 385
+R R+ ++ T KPY C C K YT PSSLR
Sbjct: 395 GCDRRFANSSDRKKHSHVHT-----------------SDKPYNCKVRGCDKSYTHPSSLR 437
Query: 386 KHIKT 390
KH+K
Sbjct: 438 KHMKV 442
>sp|Q62520|ZIC2_MOUSE Zinc finger protein ZIC 2 OS=Mus musculus GN=Zic2 PE=1 SV=2
Length = 530
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 79/171 (46%), Gaps = 31/171 (18%)
Query: 224 KDCGLEFGTQDILVKHINNDHIHANKKS-FICRWEDCTRDEKPFKAQYMLVVHMRRHTGE 282
K C F T LV H++ +H+ ++S +C WE+C R+ KPFKA+Y LV H+R HTGE
Sbjct: 271 KSCNKTFSTMHELVTHVSVEHVGGPEQSNHVCFWEECPREGKPFKAKYKLVNHIRVHTGE 330
Query: 283 KPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVM---RRI 339
KP C F +V AR KI +R + +R R+
Sbjct: 331 KPFPCP----FPGCGKVFARS-ENLKIHKRTHT---GEKPFQCEFEGCDRRFANSSDRKK 382
Query: 340 ELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKT 390
+++ T KPY+C + C K YT PSSLRKH+K
Sbjct: 383 HMHVHT-----------------SDKPYLC--KMCDKSYTHPSSLRKHMKV 414
Score = 35.8 bits (81), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 33/97 (34%)
Query: 221 CHWKDC---GLEFGTQDILVKHINNDHIHANKKSFICRWEDCTR---------------- 261
C W++C G F + LV HI +H +K F C + C +
Sbjct: 302 CFWEECPREGKPFKAKYKLVNHIR---VHTGEKPFPCPFPGCGKVFARSENLKIHKRTHT 358
Query: 262 DEKPFKAQYMLV-----------VHMRRHTGEKPHKC 287
EKPF+ ++ HM HT +KP+ C
Sbjct: 359 GEKPFQCEFEGCDRRFANSSDRKKHMHVHTSDKPYLC 395
>sp|O73689|ZIC1_XENLA Zinc finger protein ZIC 1 OS=Xenopus laevis GN=zic1 PE=2 SV=1
Length = 443
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 83/182 (45%), Gaps = 32/182 (17%)
Query: 224 KDCGLEFGTQDILVKHINNDHIHANKKS-FICRWEDCTRDEKPFKAQYMLVVHMRRHTGE 282
K C F T LV H+ +H+ ++S IC WE+C R+ KPFKA+Y L+ H+R HTGE
Sbjct: 236 KSCNKTFSTMHELVTHVTVEHVGGPEQSNHICVWEECPREGKPFKAKYKLINHIRVHTGE 295
Query: 283 KPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVM---RRI 339
KP C F +V AR KI +R + +R R+
Sbjct: 296 KPFPC----PFPGCGKVFARS-ENLKIHKRTHT---GEKPFKCEFEGCDRRFANSSDRKK 347
Query: 340 ELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKTVHAPASLNP 399
+++ T KPY+C + C K YT PSSLRKH+K VH +S
Sbjct: 348 HMHVHTS-----------------DKPYLC--KMCDKSYTHPSSLRKHMK-VHEASSQGS 387
Query: 400 VP 401
P
Sbjct: 388 QP 389
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 33/97 (34%)
Query: 221 CHWKDC---GLEFGTQDILVKHINNDHIHANKKSFICRWEDCTR---------------- 261
C W++C G F + L+ HI +H +K F C + C +
Sbjct: 267 CVWEECPREGKPFKAKYKLINHIR---VHTGEKPFPCPFPGCGKVFARSENLKIHKRTHT 323
Query: 262 DEKPFKAQYMLV-----------VHMRRHTGEKPHKC 287
EKPFK ++ HM HT +KP+ C
Sbjct: 324 GEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYLC 360
>sp|Q91689|ZIC2A_XENLA Zinc finger protein ZIC 2-A OS=Xenopus laevis GN=zic2-a PE=2 SV=2
Length = 503
Score = 84.7 bits (208), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 79/171 (46%), Gaps = 31/171 (18%)
Query: 224 KDCGLEFGTQDILVKHINNDHIHANKKS-FICRWEDCTRDEKPFKAQYMLVVHMRRHTGE 282
K C F T LV H++ +H+ ++S IC WE+C R+ KPFKA+Y LV H+R HTGE
Sbjct: 292 KSCTKTFSTMHELVTHVSVEHVGGPEQSNHICFWEECPREGKPFKAKYKLVNHIRVHTGE 351
Query: 283 KPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVM---RRI 339
KP C F +V AR KI +R + +R R+
Sbjct: 352 KPFPC----PFPGCGKVFARS-ENLKIHKRTHT---GEKPFQCEFEGCDRRFANSSDRKK 403
Query: 340 ELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKT 390
+++ T KPY+C + C K YT PSSLRKH+K
Sbjct: 404 HMHVHT-----------------SDKPYLC--KMCDKSYTHPSSLRKHMKV 435
Score = 35.8 bits (81), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 37/97 (38%), Gaps = 33/97 (34%)
Query: 221 CHWKDC---GLEFGTQDILVKHINNDHIHANKKSFICRWEDCTR---------------- 261
C W++C G F + LV HI +H +K F C + C +
Sbjct: 323 CFWEECPREGKPFKAKYKLVNHIR---VHTGEKPFPCPFPGCGKVFARSENLKIHKRTHT 379
Query: 262 DEKPFKAQYMLV-----------VHMRRHTGEKPHKC 287
EKPF+ ++ HM HT +KP+ C
Sbjct: 380 GEKPFQCEFEGCDRRFANSSDRKKHMHVHTSDKPYLC 416
>sp|Q98T94|GLIS2_XENLA Zinc finger protein GLIS2 OS=Xenopus laevis GN=glis2 PE=2 SV=1
Length = 492
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 72/173 (41%), Gaps = 29/173 (16%)
Query: 221 CHWKDCGLEFGTQDILVKHINNDHIHANKKS-FICRWEDCTRDEKPFKAQYMLVVHMRRH 279
C W C F LV H+N+ H+ K + + C WE C R + F A+Y +++H+R H
Sbjct: 160 CQWAKCNRLFELLQELVDHVNDFHVKPEKDAGYCCHWEGCARRGRGFNARYKMLIHIRTH 219
Query: 280 TGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVR--NRTRVNILAVVKRLVMR 337
T E+PH C + SR+ +I + + P N+ N K
Sbjct: 220 TNERPHCCP--TCHKSFSRLENLKIHNRSHTGEKPYMCPYEGCNKRYSNSSDRFKHTRTH 277
Query: 338 RIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKT 390
++ KPY C C KRYTDPSSLRKHIK
Sbjct: 278 YVD------------------------KPYYCKMPGCQKRYTDPSSLRKHIKA 306
>sp|Q8JJC0|ZIC1_CHICK Zinc finger protein ZIC 1 OS=Gallus gallus GN=ZIC1 PE=1 SV=1
Length = 444
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 78/171 (45%), Gaps = 31/171 (18%)
Query: 224 KDCGLEFGTQDILVKHINNDHIHANKKS-FICRWEDCTRDEKPFKAQYMLVVHMRRHTGE 282
K C F T LV H+ +H+ ++S IC WE+C R+ KPFKA+Y LV H+R HTGE
Sbjct: 237 KSCNKTFSTMHELVTHVTVEHVGGPEQSNHICFWEECPREGKPFKAKYKLVNHIRVHTGE 296
Query: 283 KPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVM---RRI 339
KP C F +V AR KI +R + +R R+
Sbjct: 297 KPFPCP----FPGCGKVFARS-ENLKIHKRTHT---GEKPFKCEFEGCDRRFANSSDRKK 348
Query: 340 ELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKT 390
+++ T KPY+C + C K YT PSSLRKH+K
Sbjct: 349 HMHVHT-----------------SDKPYLC--KMCDKSYTHPSSLRKHMKV 380
Score = 35.8 bits (81), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 33/97 (34%)
Query: 221 CHWKDC---GLEFGTQDILVKHINNDHIHANKKSFICRWEDCTR---------------- 261
C W++C G F + LV HI +H +K F C + C +
Sbjct: 268 CFWEECPREGKPFKAKYKLVNHIR---VHTGEKPFPCPFPGCGKVFARSENLKIHKRTHT 324
Query: 262 DEKPFKAQYMLV-----------VHMRRHTGEKPHKC 287
EKPFK ++ HM HT +KP+ C
Sbjct: 325 GEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYLC 361
>sp|P46684|ZIC1_MOUSE Zinc finger protein ZIC 1 OS=Mus musculus GN=Zic1 PE=1 SV=2
Length = 447
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 78/171 (45%), Gaps = 31/171 (18%)
Query: 224 KDCGLEFGTQDILVKHINNDHIHANKKS-FICRWEDCTRDEKPFKAQYMLVVHMRRHTGE 282
K C F T LV H+ +H+ ++S IC WE+C R+ KPFKA+Y LV H+R HTGE
Sbjct: 240 KSCNKTFSTMHELVTHVTVEHVGGPEQSNHICFWEECPREGKPFKAKYKLVNHIRVHTGE 299
Query: 283 KPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVM---RRI 339
KP C F +V AR KI +R + +R R+
Sbjct: 300 KPFPC----PFPGCGKVFARS-ENLKIHKRTHT---GEKPFKCEFEGCDRRFANSSDRKK 351
Query: 340 ELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKT 390
+++ T KPY+C + C K YT PSSLRKH+K
Sbjct: 352 HMHVHTS-----------------DKPYLC--KMCDKSYTHPSSLRKHMKV 383
Score = 35.8 bits (81), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 33/97 (34%)
Query: 221 CHWKDC---GLEFGTQDILVKHINNDHIHANKKSFICRWEDCTR---------------- 261
C W++C G F + LV HI +H +K F C + C +
Sbjct: 271 CFWEECPREGKPFKAKYKLVNHIR---VHTGEKPFPCPFPGCGKVFARSENLKIHKRTHT 327
Query: 262 DEKPFKAQYMLV-----------VHMRRHTGEKPHKC 287
EKPFK ++ HM HT +KP+ C
Sbjct: 328 GEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKPYLC 364
>sp|O60481|ZIC3_HUMAN Zinc finger protein ZIC 3 OS=Homo sapiens GN=ZIC3 PE=1 SV=1
Length = 467
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 80/187 (42%), Gaps = 41/187 (21%)
Query: 218 ETNCHW----------KDCGLEFGTQDILVKHINNDHIHA-NKKSFICRWEDCTRDEKPF 266
E +C W K C F T LV H+ +H+ + + +C WE+C R+ K F
Sbjct: 250 ELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSF 309
Query: 267 KAQYMLVVHMRRHTGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVN 326
KA+Y LV H+R HTGEKP C F ++ AR KI +R +
Sbjct: 310 KAKYKLVNHIRVHTGEKPFPC----PFPGCGKIFARS-ENLKIHKRTHT---GEKPFKCE 361
Query: 327 ILAVVKRLVM---RRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSS 383
+R R+ +++ T KPY+C + C K YT PSS
Sbjct: 362 FEGCDRRFANSSDRKKHMHVHTS-----------------DKPYIC--KVCDKSYTHPSS 402
Query: 384 LRKHIKT 390
LRKH+K
Sbjct: 403 LRKHMKV 409
>sp|Q62521|ZIC3_MOUSE Zinc finger protein ZIC 3 OS=Mus musculus GN=Zic3 PE=1 SV=2
Length = 466
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 80/187 (42%), Gaps = 41/187 (21%)
Query: 218 ETNCHW----------KDCGLEFGTQDILVKHINNDHIHA-NKKSFICRWEDCTRDEKPF 266
E +C W K C F T LV H+ +H+ + + +C WE+C R+ K F
Sbjct: 249 ELSCKWIEEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSF 308
Query: 267 KAQYMLVVHMRRHTGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVN 326
KA+Y LV H+R HTGEKP C F ++ AR KI +R +
Sbjct: 309 KAKYKLVNHIRVHTGEKPFPC----PFPGCGKIFARS-ENLKIHKRTHT---GEKPFKCE 360
Query: 327 ILAVVKRLVM---RRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSS 383
+R R+ +++ T KPY+C + C K YT PSS
Sbjct: 361 FEGCDRRFANSSDRKKHMHVHTS-----------------DKPYIC--KVCDKSYTHPSS 401
Query: 384 LRKHIKT 390
LRKH+K
Sbjct: 402 LRKHMKV 408
>sp|Q61467|ZIC4_MOUSE Zinc finger protein ZIC 4 OS=Mus musculus GN=Zic4 PE=1 SV=2
Length = 341
Score = 82.0 bits (201), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/186 (32%), Positives = 79/186 (42%), Gaps = 33/186 (17%)
Query: 218 ETNCHW---------KDCGLEFGTQDILVKHINNDHIHANKKS-FICRWEDCTRDEKPFK 267
E C W + C F T LV H+ +H+ +++ IC WE+C R KPFK
Sbjct: 134 ELICKWLGDDSPMSPRPCSKTFSTMHELVTHVTVEHVGGPEQANHICFWEECPRQGKPFK 193
Query: 268 AQYMLVVHMRRHTGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNI 327
A+Y LV H+R HTGEKP C F +V AR S+ + + RT
Sbjct: 194 AKYKLVNHIRVHTGEKPFPC----PFPGCGKVFAR-----------SENLKIHKRTHTGE 238
Query: 328 LAVVKRLVMRRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKH 387
R E S + + KPY+C C K YT PSSLRKH
Sbjct: 239 KPF-------RCEFEGCERRFANSSDRKKHSHVHTSDKPYMCKVRGCDKCYTHPSSLRKH 291
Query: 388 IKTVHA 393
+K VH
Sbjct: 292 MK-VHG 296
>sp|Q8N9L1|ZIC4_HUMAN Zinc finger protein ZIC 4 OS=Homo sapiens GN=ZIC4 PE=1 SV=3
Length = 334
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/172 (34%), Positives = 75/172 (43%), Gaps = 30/172 (17%)
Query: 226 CGLEFGTQDILVKHINNDHIHANKKS-FICRWEDCTRDEKPFKAQYMLVVHMRRHTGEKP 284
C F T LV H+ +H+ +++ IC WE+C R KPFKA+Y LV H+R HTGEKP
Sbjct: 144 CSKTFSTMHELVTHVTVEHVGGPEQANHICFWEECPRQGKPFKAKYKLVNHIRVHTGEKP 203
Query: 285 HKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVM---RRIEL 341
C F +V AR KI +R R +R R+
Sbjct: 204 FPC----PFPGCGKVFARS-ENLKIHKRTHT---GEKPFRCEFEGCERRFANSSDRKKHS 255
Query: 342 NIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKTVHA 393
++ T KPY C C K YT PSSLRKH+K VH
Sbjct: 256 HVHTS-----------------DKPYTCKVRGCDKCYTHPSSLRKHMK-VHG 289
>sp|Q6DJQ6|ZIC3_XENTR Zinc finger protein ZIC 3 OS=Xenopus tropicalis GN=zic3 PE=2 SV=1
Length = 441
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 79/187 (42%), Gaps = 41/187 (21%)
Query: 218 ETNCHW----------KDCGLEFGTQDILVKHINNDHIHA-NKKSFICRWEDCTRDEKPF 266
E +C W K C F + LV H+ +H+ + + IC WE+C R K F
Sbjct: 221 ELSCKWLEESPMNRPQKTCDRTFSSMHELVTHMTMEHVGGPEQTNHICYWEECPRGGKSF 280
Query: 267 KAQYMLVVHMRRHTGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVN 326
KA+Y LV H+R HTGEKP C F ++ AR KI +R +
Sbjct: 281 KAKYKLVNHIRVHTGEKPFPC----PFPGCGKIFARS-ENLKIHKRTHT---GEKPFKCE 332
Query: 327 ILAVVKRLVM---RRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSS 383
+R R+ +++ T KPY+C + C K YT PSS
Sbjct: 333 FEGCDRRFANSSDRKKHMHVHTS-----------------DKPYIC--KVCDKSYTHPSS 373
Query: 384 LRKHIKT 390
LRKH+K
Sbjct: 374 LRKHMKV 380
>sp|O57311|ZIC3_XENLA Zinc finger protein ZIC 3 OS=Xenopus laevis GN=zic3 PE=2 SV=3
Length = 441
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 79/187 (42%), Gaps = 41/187 (21%)
Query: 218 ETNCHW----------KDCGLEFGTQDILVKHINNDHIHA-NKKSFICRWEDCTRDEKPF 266
E +C W K C F + LV H+ +H+ + + IC WE+C R K F
Sbjct: 221 ELSCKWLEESTMNHPQKTCDRTFSSMHELVTHMTMEHVGGPEQNNHICYWEECPRGGKSF 280
Query: 267 KAQYMLVVHMRRHTGEKPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVN 326
KA+Y LV H+R HTGEKP C F ++ AR KI +R +
Sbjct: 281 KAKYKLVNHIRVHTGEKPFPC----PFPGCGKIFARS-ENLKIHKRTHT---GEKPFKCE 332
Query: 327 ILAVVKRLVM---RRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSS 383
+R R+ +++ T KPY+C + C K YT PSS
Sbjct: 333 FEGCDRRFANSSDRKKHMHVHTS-----------------DKPYIC--KVCDKSYTHPSS 373
Query: 384 LRKHIKT 390
LRKH+K
Sbjct: 374 LRKHMKV 380
>sp|P39768|OPA_DROME Pair-rule protein odd-paired OS=Drosophila melanogaster GN=opa PE=2
SV=2
Length = 609
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 71/171 (41%), Gaps = 29/171 (16%)
Query: 224 KDCGLEFGTQDILVKHINNDHIHANK-KSFICRWEDCTRDEKPFKAQYMLVVHMRRHTGE 282
K C F + +V H+ +H+ + + C W C+R+ +PFKA+Y LV H+R HTGE
Sbjct: 229 KTCNKVFHSMHEIVTHLTVEHVGGPECTTHACFWVGCSRNGRPFKAKYKLVNHIRVHTGE 288
Query: 283 KPHKCTDLEAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVM---RRI 339
KP C +V AR KI +R + +R R+
Sbjct: 289 KPFACPH----PGCGKVFARS-ENLKIHKRTHT---GEKPFKCEHEGCDRRFANSSDRKK 340
Query: 340 ELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIKT 390
++ T KPY C C K YT PSSLRKH+K
Sbjct: 341 HSHVHTS-----------------DKPYNCRINGCDKSYTHPSSLRKHMKV 374
>sp|Q9UTM0|IEC1_SCHPO INO80 complex subunit 1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=iec1 PE=1 SV=1
Length = 249
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 52/113 (46%), Gaps = 20/113 (17%)
Query: 192 MKIKRETKQHSPESPAGDKYEPGDFVETNCHWKDCGLEFGTQDILVKHINN--------- 242
M I +T P SP EP ET CHW+ C + T D LV HI+N
Sbjct: 1 MSISSDTSGSVPGSPID--LEPES--ETICHWQSCEQDLLTLDNLVHHIHNGTTSNLRLI 56
Query: 243 -------DHIHANKKSFICRWEDCTRDEKPFKAQYMLVVHMRRHTGEKPHKCT 288
DHI + + C W+DC R +++ LV H+R HTGEKP C+
Sbjct: 57 SNINSILDHIGNRRPKYTCEWDDCPRKGMVQTSRFALVAHLRSHTGEKPFICS 109
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 50/89 (56%), Gaps = 11/89 (12%)
Query: 365 KPYVCGEENCTKRYTDPSSLRKHIKTVHAPASL---NPVPQHKDM--QDIQSNEVTQSNM 419
KP++C C + +T +L KH++TVH +L +P+P+ M Q++ +N + QS
Sbjct: 104 KPFICSVPECDRSFTRSDALAKHMRTVHEADTLRPSDPIPKAHPMHPQNV-ANAMVQS-A 161
Query: 420 RQSTYQRTLEYV----EQCQNWVSSSTQP 444
R++ Q+ + V E +NW+ +++ P
Sbjct: 162 REARAQQQMHGVGNTNEDVENWLDAASMP 190
>sp|Q96PQ6|ZN317_HUMAN Zinc finger protein 317 OS=Homo sapiens GN=ZNF317 PE=2 SV=2
Length = 595
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 98/255 (38%), Gaps = 64/255 (25%)
Query: 185 GGASWKPMKIKRETKQHSPESPAG--------------DKYEPGDFVETNCHWKDCGLEF 230
G A P +K + H+ E P + ++ VE K+CG F
Sbjct: 340 GKAFQHPSHLKEHVRNHTGEKPYACTQCGKAFRWKSNFNLHKKNHMVEKTYECKECGKSF 399
Query: 231 GTQDILVKHINNDHIHANKKSFICRWEDCTRDEKPFKAQYMLVVHMRRHTGEKPHKCTDL 290
G KH+ IH KK CR + K F+ Q +L HM HTGEKP+ C DL
Sbjct: 400 GDLVSRRKHMR---IHIVKKPVECR-----QCGKTFRNQSILKTHMNSHTGEKPYGC-DL 450
Query: 291 --EAFDTSSRVAA--------RRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVMRRIE 340
+AF SS + A RR + D + R V++ V KR+ R+
Sbjct: 451 CGKAFSASSNLTAHRKIHTQERRYECAACGKVFGDYLSRRRHMSVHL--VKKRVECRQCG 508
Query: 341 LNIRTELTLMS-------------------------LNVQFEILSRPKLKPYVCGEENCT 375
R + TL + LNV I + KPY C C
Sbjct: 509 KAFRNQSTLKTHMRSHTGEKPYECDHCGKAFSIGSNLNVHRRIHTGE--KPYEC--LVCG 564
Query: 376 KRYTDPSSLRKHIKT 390
K ++D SSLR H+KT
Sbjct: 565 KAFSDHSSLRSHVKT 579
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 71/173 (41%), Gaps = 26/173 (15%)
Query: 226 CGLEFGTQDILVKHINNDHIHANKKSFICRWEDCTRDEKPFKAQYMLVVHMRRHTGEKPH 285
CG +G L+ H H ++ + C DC K F+ L H+R HTGEKP+
Sbjct: 311 CGKAYGRSCHLIAH---KRTHTGERPYEC--HDCG---KAFQHPSHLKEHVRNHTGEKPY 362
Query: 286 KCTDL-EAFDTSS--------RVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVM 336
CT +AF S + + + + DL+ R R++I V K +
Sbjct: 363 ACTQCGKAFRWKSNFNLHKKNHMVEKTYECKECGKSFGDLVSRRKHMRIHI--VKKPVEC 420
Query: 337 RRIELNIRTELTLMSLNVQFEILSRPKLKPYVCGEENCTKRYTDPSSLRKHIK 389
R+ R + L + + S KPY C + C K ++ S+L H K
Sbjct: 421 RQCGKTFRNQSILKT-----HMNSHTGEKPYGC--DLCGKAFSASSNLTAHRK 466
Score = 40.0 bits (92), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 9/80 (11%)
Query: 225 DCGLEFGTQDILVKHINNDHIHANKKSFICRWEDCTRDEKPFKAQYMLVVHMRRHTGEKP 284
DCG F L H H +K F DC++ F+ L +HMR HTGE+P
Sbjct: 254 DCGKAFNDPSALRSHART---HLKEKPF-----DCSQCGNAFRTLSALKIHMRVHTGERP 305
Query: 285 HKCTDL-EAFDTSSRVAARR 303
+KC +A+ S + A +
Sbjct: 306 YKCDQCGKAYGRSCHLIAHK 325
Score = 38.9 bits (89), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 77/173 (44%), Gaps = 18/173 (10%)
Query: 222 HWKDCGLEFGTQDILVKHINNDHIHANKKSFICRWEDCTRDEKPFKAQYMLVVHMRRHTG 281
H +D G+ F + L +H++ ++ +K +C + +K F L H R HTG
Sbjct: 195 HRRDYGVAFKGRPHLTQHMS---MYDGRK-----MHECHQCQKAFTTSASLTRHRRIHTG 246
Query: 282 EKPHKCTDL-EAFDTSSRVAARRIRGWKISRRISDLIPVRNRTRVNILAVVKRLVMRRIE 340
EKP++C+D +AF+ S A R + + D N R + A+ + + E
Sbjct: 247 EKPYECSDCGKAFNDPS--ALRSHARTHLKEKPFDCSQCGNAFRT-LSALKIHMRVHTGE 303
Query: 341 LNIRTELTLMSLNVQFEILSRPKL----KPYVCGEENCTKRYTDPSSLRKHIK 389
+ + + +++ + +PY C +C K + PS L++H++
Sbjct: 304 RPYKCDQCGKAYGRSCHLIAHKRTHTGERPYEC--HDCGKAFQHPSHLKEHVR 354
>sp|B4F7E9|ZNF76_RAT Zinc finger protein 76 OS=Rattus norvegicus GN=Znf76 PE=2 SV=1
Length = 568
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/200 (30%), Positives = 81/200 (40%), Gaps = 27/200 (13%)
Query: 202 SPESPAGDKYEPGDFVETNCHWKDCGLEFGTQDILVKHINNDHIHANKKSFICRWEDCTR 261
SP S G + GD C +K CG + T L H + H +S+ C + C
Sbjct: 149 SPASHNGKGQQVGDRA-FRCGYKGCGRLYTTAHHLKVH---ERAHTGDRSYRCDFPSCG- 203
Query: 262 DEKPFKAQYMLVVHMRRHTGEKPHKCTD---LEAFDTSSRVAARRIRGWKISR--RISDL 316
K F Y L H+R HTGEKP+KC + +AF TS + + +R R R
Sbjct: 204 --KAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDL-QKHVRTHTGERPFRCPFE 260
Query: 317 IPVRNRTRVNILAVVKRLVMRRIELNIRTELT---------LMSLNVQFEILSRPKLKPY 367
R+ T NI R V R R + N + + KPY
Sbjct: 261 GCGRSFTTSNI-----RKVHVRTHTGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPY 315
Query: 368 VCGEENCTKRYTDPSSLRKH 387
VC C KR+T+ SSL KH
Sbjct: 316 VCTVPGCGKRFTEYSSLYKH 335
>sp|Q17PR1|JING_AEDAE Zinc finger protein jing homolog OS=Aedes aegypti GN=AAEL000263 PE=3
SV=1
Length = 1605
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%)
Query: 221 CHWKDCGLEFGTQDILVKHINNDHIHANKKSFICRWEDCTRDEKPFKAQYMLVVHMRRHT 280
C+W +C +F T L+ H+ H++ F C W+ C K ++ L H+ H
Sbjct: 1262 CYWSNCDAQFDTSSKLLDHLQIQHVNTQTGPFACLWDGCKVHNKESCSRRWLERHVLSHG 1321
Query: 281 GEKPHKC 287
G KPHKC
Sbjct: 1322 GSKPHKC 1328
>sp|Q6BSZ4|PACC_DEBHA pH-response transcription factor pacC/RIM101 OS=Debaryomyces
hansenii (strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC
0083 / IGC 2968) GN=RIM101 PE=3 SV=2
Length = 617
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 29/129 (22%)
Query: 168 GDKEAKVRAEADTSSMG-GGASWKPMKIKRETKQHSPESPAGDKYEPGDFVETNCHWKDC 226
G E K+ TS + S KP KI R+ K + P CHW DC
Sbjct: 123 GSVETKIAGGETTSGVDRDDGSVKPKKIYRKVKDEDMKGPF------------KCHWNDC 170
Query: 227 GLEFGTQDILVKHINNDHI---HANKKSFICRWEDC-----TRDEKPFKAQYMLVVHMRR 278
+ F T ++L H+ +DH+ +N S C W++C RD + H+R
Sbjct: 171 AVIFDTPELLYDHLCDDHVGRKSSNNLSLTCYWDNCLVTTVKRDH--------ITSHLRV 222
Query: 279 HTGEKPHKC 287
H KP C
Sbjct: 223 HVPLKPFHC 231
>sp|O77027|CI_DROYA Protein cubitus interruptus (Fragment) OS=Drosophila yakuba GN=ci
PE=3 SV=1
Length = 403
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 365 KPYVCGEENCTKRYTDPSSLRKHIKTVHAPASLNPVPQHKDM 406
KPY+C CTKRYTDPSSLRKH+KTVH A +HK +
Sbjct: 56 KPYICKAPGCTKRYTDPSSLRKHVKTVHG-AEFYANKKHKGL 96
>sp|Q7SXV2|AEBP2_DANRE Zinc finger protein AEBP2 OS=Danio rerio GN=aebp2 PE=2 SV=2
Length = 415
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 221 CHWKDCGLEFGTQDILVKHINNDHIHANKKS-FICRWEDCTRDEKPFKAQYMLVVHMRRH 279
C W C + F T L +HI H+ + F+C W+ C P +Q L HM H
Sbjct: 181 CCWDQCHMLFNTSPDLAEHIRGVHVDGQRGGVFVCLWKGCKVYNTPSTSQSWLQRHMLSH 240
Query: 280 TGEKPHKC 287
+G+KP KC
Sbjct: 241 SGDKPFKC 248
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 185,345,820
Number of Sequences: 539616
Number of extensions: 7805159
Number of successful extensions: 34323
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 878
Number of HSP's successfully gapped in prelim test: 460
Number of HSP's that attempted gapping in prelim test: 23114
Number of HSP's gapped (non-prelim): 10238
length of query: 486
length of database: 191,569,459
effective HSP length: 121
effective length of query: 365
effective length of database: 126,275,923
effective search space: 46090711895
effective search space used: 46090711895
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)