Your job contains 1 sequence.
>psy1630
MYLTTYDLACVCCRENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRE
SPNVQVDEEGIKVRPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWY
ITFENDEDAQKAYRYLREDVREFQNKESK
The BLAST search returned 7 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy1630
(149 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0035424 - symbol:CG11505 species:7227 "Drosophila ... 556 2.1e-52 1
UNIPROTKB|E9PDG5 - symbol:LARP4 "La-related protein 4" sp... 516 1.5e-49 1
UNIPROTKB|G3XAA8 - symbol:LARP4 "La-related protein 4" sp... 516 1.5e-49 1
UNIPROTKB|Q71RC2 - symbol:LARP4 "La-related protein 4" sp... 516 1.5e-49 1
UNIPROTKB|Q96J85 - symbol:LARP4 "La-related protein 4" sp... 516 1.5e-49 1
UNIPROTKB|F1MHD9 - symbol:LARP4 "Uncharacterized protein"... 511 5.2e-49 1
UNIPROTKB|E2R028 - symbol:LARP4 "Uncharacterized protein"... 510 6.7e-49 1
UNIPROTKB|F1PIU8 - symbol:LARP4 "Uncharacterized protein"... 510 6.7e-49 1
UNIPROTKB|F1SH87 - symbol:LARP4 "Uncharacterized protein"... 510 6.7e-49 1
UNIPROTKB|H9KZD5 - symbol:LARP4 "Uncharacterized protein"... 512 6.8e-49 1
MGI|MGI:2443114 - symbol:Larp4 "La ribonucleoprotein doma... 507 1.4e-48 1
UNIPROTKB|I3LLE0 - symbol:LARP4 "Uncharacterized protein"... 505 2.3e-48 1
UNIPROTKB|K7GMK7 - symbol:LARP4 "Uncharacterized protein"... 505 2.3e-48 1
UNIPROTKB|F1M4K9 - symbol:LOC683071 "Protein LOC683071" s... 499 9.8e-48 1
UNIPROTKB|F1P1X0 - symbol:LARP4B "Uncharacterized protein... 489 3.4e-46 1
UNIPROTKB|F1MHX7 - symbol:LARP4B "Uncharacterized protein... 486 5.0e-46 1
RGD|1310713 - symbol:Larp4b "La ribonucleoprotein domain ... 480 1.0e-45 1
MGI|MGI:106330 - symbol:Larp4b "La ribonucleoprotein doma... 480 2.7e-45 1
UNIPROTKB|F1RX46 - symbol:LARP4B "Uncharacterized protein... 478 3.9e-45 1
UNIPROTKB|Q92615 - symbol:LARP4B "La-related protein 4B" ... 477 5.7e-45 1
ZFIN|ZDB-GENE-061027-39 - symbol:larp4b "La ribonucleopro... 470 2.9e-44 1
DICTYBASE|DDB_G0289333 - symbol:DDB_G0289333 species:4468... 269 1.8e-22 1
UNIPROTKB|D6RFF0 - symbol:LARP7 "La-related protein 7" sp... 127 9.7e-08 1
TAIR|locus:2125334 - symbol:LARP1c "La related protein 1c... 130 1.3e-07 1
DICTYBASE|DDB_G0281763 - symbol:DDB_G0281763 "Lupus La pr... 127 1.4e-07 1
TAIR|locus:2170478 - symbol:LARP6a "La related protein 6a... 128 1.5e-07 1
UNIPROTKB|D6RAF3 - symbol:LARP7 "La-related protein 7" sp... 117 2.9e-07 1
UNIPROTKB|D6RF49 - symbol:LARP7 "La-related protein 7" sp... 117 2.9e-07 1
UNIPROTKB|F1NJ86 - symbol:LARP7 "Uncharacterized protein"... 120 3.0e-07 1
UNIPROTKB|Q4G0J3 - symbol:LARP7 "La-related protein 7" sp... 127 3.2e-07 1
MGI|MGI:107634 - symbol:Larp7 "La ribonucleoprotein domai... 126 3.9e-07 1
RGD|1592474 - symbol:Larp7 "La ribonucleoprotein domain f... 126 3.9e-07 1
UNIPROTKB|Q5XI01 - symbol:Larp7 "La-related protein 7" sp... 126 3.9e-07 1
UNIPROTKB|I3LNK9 - symbol:I3LNK9 "Uncharacterized protein... 125 5.1e-07 1
UNIPROTKB|F1S150 - symbol:LARP7 "Uncharacterized protein"... 125 5.2e-07 1
UNIPROTKB|Q659C4 - symbol:LARP1B "La-related protein 1B" ... 117 5.9e-07 2
UNIPROTKB|F1MR14 - symbol:F1MR14 "Uncharacterized protein... 124 6.6e-07 1
UNIPROTKB|E2QW27 - symbol:LARP7 "Uncharacterized protein"... 124 6.6e-07 1
RGD|1306683 - symbol:Larp1 "La ribonucleoprotein domain f... 115 7.7e-07 2
ZFIN|ZDB-GENE-030131-6896 - symbol:larp7 "La ribonucleopr... 123 7.9e-07 1
UNIPROTKB|F1MZU1 - symbol:LARP1 "Uncharacterized protein"... 114 8.3e-07 2
UNIPROTKB|G3V0E9 - symbol:LARP1B "La-related protein 1B" ... 120 8.3e-07 1
MGI|MGI:1890165 - symbol:Larp1 "La ribonucleoprotein doma... 115 8.6e-07 2
UNIPROTKB|E1BVY8 - symbol:LOC420093 "Uncharacterized prot... 110 1.6e-06 1
UNIPROTKB|E1BQG3 - symbol:LARP7 "Uncharacterized protein"... 120 1.9e-06 1
UNIPROTKB|G3XAJ5 - symbol:LARP1B "La-related protein 1B" ... 117 3.2e-06 1
FB|FBgn0260771 - symbol:Larp7 "La related protein 7" spec... 116 4.9e-06 1
UNIPROTKB|F1P339 - symbol:LARP1 "Uncharacterized protein"... 118 5.3e-06 1
WB|WBGene00020097 - symbol:larp-1 species:6239 "Caenorhab... 119 5.4e-06 1
POMBASE|SPAC57A10.10c - symbol:sla1 "La protein homolog" ... 110 7.2e-06 1
UNIPROTKB|Q6PKG0 - symbol:LARP1 "La-related protein 1" sp... 117 8.3e-06 1
FB|FBgn0261618 - symbol:larp "La related protein" species... 117 1.3e-05 1
UNIPROTKB|Q5ZKS1 - symbol:SSB "Uncharacterized protein" s... 100 1.9e-05 1
TAIR|locus:2156912 - symbol:LARP1b "AT5G66100" species:37... 108 4.9e-05 1
UNIPROTKB|F1P301 - symbol:SSB "Uncharacterized protein" s... 100 0.00050 1
ASPGD|ASPL0000062948 - symbol:AN1288 species:162425 "Emer... 105 0.00059 1
>FB|FBgn0035424 [details] [associations]
symbol:CG11505 species:7227 "Drosophila melanogaster"
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
EMBL:AE014296 GO:GO:0000166 Gene3D:3.30.70.330 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 InterPro:IPR006630 PROSITE:PS50961
eggNOG:COG5193 Pfam:PF05383 SMART:SM00715 HSSP:Q71RC2
GeneTree:ENSGT00530000063417 EMBL:BT010118 RefSeq:NP_647793.1
RefSeq:NP_728843.1 RefSeq:NP_995985.2 ProteinModelPortal:Q9I7T7
SMR:Q9I7T7 IntAct:Q9I7T7 MINT:MINT-298656 STRING:Q9I7T7
PaxDb:Q9I7T7 EnsemblMetazoa:FBtr0073046 GeneID:38399
KEGG:dme:Dmel_CG11505 UCSC:CG11505-RB FlyBase:FBgn0035424
InParanoid:Q9VZS2 OMA:TPNINAS OrthoDB:EOG4V15H8 PhylomeDB:Q9I7T7
ChiTaRS:CG11505 GenomeRNAi:38399 NextBio:808431 Bgee:Q9I7T7
Uniprot:Q9I7T7
Length = 1531
Score = 556 (200.8 bits), Expect = 2.1e-52, P = 2.1e-52
Identities = 102/133 (76%), Positives = 121/133 (90%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENLAND YLLSQMD+DQYVPI+TVA FN V+KLT DI LITEVLRESPNVQVD++G++V
Sbjct: 282 RENLANDTYLLSQMDSDQYVPIYTVARFNLVRKLTNDINLITEVLRESPNVQVDDKGLRV 341
Query: 74 RPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAY 133
RPN KRCI+ILREI ++TPL++++ LFS +SCPR ISCEFA NNSWYITFE+DEDAQKAY
Sbjct: 342 RPNRKRCIIILREISNNTPLDDVKALFSNESCPRPISCEFAANNSWYITFESDEDAQKAY 401
Query: 134 RYLREDVREFQNK 146
+YLRE+V+EFQ K
Sbjct: 402 KYLREEVKEFQGK 414
>UNIPROTKB|E9PDG5 [details] [associations]
symbol:LARP4 "La-related protein 4" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 SMART:SM00360 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 EMBL:AC090058 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 UniGene:Hs.26613
DNASU:113251 GeneID:113251 KEGG:hsa:113251 CTD:113251
HGNC:HGNC:24320 ChiTaRS:LARP4 GenomeRNAi:113251 NextBio:78808
IPI:IPI00418689 RefSeq:NP_001164275.1 ProteinModelPortal:E9PDG5
SMR:E9PDG5 Ensembl:ENST00000522085 ArrayExpress:E9PDG5 Bgee:E9PDG5
Uniprot:E9PDG5
Length = 445
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 90/133 (67%), Positives = 116/133 (87%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENL+ D YL+SQMD+DQ++PIWTVAN ++KKLT D LI EVLR SP VQVDE+G KV
Sbjct: 133 RENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKV 192
Query: 74 RPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAY 133
RP+HKRCIVILREIP++TP+EE++GLF ++CP+ ISCEFAHN++WYITF++D DAQ+A+
Sbjct: 193 RPSHKRCIVILREIPETTPIEEVKGLFKSENCPKVISCEFAHNSNWYITFQSDTDAQQAF 252
Query: 134 RYLREDVREFQNK 146
+YLRE+V+ FQ K
Sbjct: 253 KYLREEVKTFQGK 265
>UNIPROTKB|G3XAA8 [details] [associations]
symbol:LARP4 "La-related protein 4" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR000504 SMART:SM00360 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 EMBL:CH471111 GO:GO:0030529
EMBL:AC090058 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 RefSeq:NP_001164279.1 UniGene:Hs.26613 GeneID:113251
KEGG:hsa:113251 CTD:113251 HGNC:HGNC:24320 ChiTaRS:LARP4
GenomeRNAi:113251 NextBio:78808 ProteinModelPortal:G3XAA8
SMR:G3XAA8 PRIDE:G3XAA8 Ensembl:ENST00000293618 ArrayExpress:G3XAA8
Bgee:G3XAA8 Uniprot:G3XAA8
Length = 653
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 90/133 (67%), Positives = 116/133 (87%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENL+ D YL+SQMD+DQ++PIWTVAN ++KKLT D LI EVLR SP VQVDE+G KV
Sbjct: 133 RENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKV 192
Query: 74 RPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAY 133
RP+HKRCIVILREIP++TP+EE++GLF ++CP+ ISCEFAHN++WYITF++D DAQ+A+
Sbjct: 193 RPSHKRCIVILREIPETTPIEEVKGLFKSENCPKVISCEFAHNSNWYITFQSDTDAQQAF 252
Query: 134 RYLREDVREFQNK 146
+YLRE+V+ FQ K
Sbjct: 253 KYLREEVKTFQGK 265
>UNIPROTKB|Q71RC2 [details] [associations]
symbol:LARP4 "La-related protein 4" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IMP] [GO:0022604 "regulation
of cell morphogenesis" evidence=IMP] InterPro:IPR000504
PROSITE:PS50102 SMART:SM00360 GO:GO:0007010 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 EMBL:CH471111 GO:GO:0022604
EMBL:AC090058 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 eggNOG:NOG327281 HOGENOM:HOG000004803
HOVERGEN:HBG055137 EMBL:AK055521 EMBL:AK125113 EMBL:AK291746
EMBL:AF370416 EMBL:BX647457 EMBL:CR936626 IPI:IPI00043638
IPI:IPI00395347 IPI:IPI00797384 IPI:IPI00982060
RefSeq:NP_001164279.1 RefSeq:NP_443111.4 RefSeq:NP_954658.2
UniGene:Hs.26613 PDB:2CQK PDB:3PKN PDBsum:2CQK PDBsum:3PKN
ProteinModelPortal:Q71RC2 SMR:Q71RC2 IntAct:Q71RC2 STRING:Q71RC2
PhosphoSite:Q71RC2 DMDM:189047131 PaxDb:Q71RC2 PRIDE:Q71RC2
DNASU:113251 Ensembl:ENST00000347328 Ensembl:ENST00000398473
Ensembl:ENST00000429001 Ensembl:ENST00000518444
Ensembl:ENST00000520064 GeneID:113251 KEGG:hsa:113251
UCSC:uc001rwm.3 UCSC:uc001rws.2 UCSC:uc009zlr.1 CTD:113251
GeneCards:GC12P050794 HGNC:HGNC:24320 HPA:HPA039306 HPA:HPA039673
neXtProt:NX_Q71RC2 PharmGKB:PA142671566 OMA:WTIANME ChiTaRS:LARP4
EvolutionaryTrace:Q71RC2 GenomeRNAi:113251 NextBio:78808
PMAP-CutDB:Q71RC2 ArrayExpress:Q71RC2 Bgee:Q71RC2 CleanEx:HS_LARP4
Genevestigator:Q71RC2 GermOnline:ENSG00000161813 Uniprot:Q71RC2
Length = 724
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 90/133 (67%), Positives = 116/133 (87%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENL+ D YL+SQMD+DQ++PIWTVAN ++KKLT D LI EVLR SP VQVDE+G KV
Sbjct: 133 RENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKV 192
Query: 74 RPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAY 133
RP+HKRCIVILREIP++TP+EE++GLF ++CP+ ISCEFAHN++WYITF++D DAQ+A+
Sbjct: 193 RPSHKRCIVILREIPETTPIEEVKGLFKSENCPKVISCEFAHNSNWYITFQSDTDAQQAF 252
Query: 134 RYLREDVREFQNK 146
+YLRE+V+ FQ K
Sbjct: 253 KYLREEVKTFQGK 265
>UNIPROTKB|Q96J85 [details] [associations]
symbol:LARP4 "La-related protein 4" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 SMART:SM00360 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 EMBL:AC090058 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 HOGENOM:HOG000004803
UniGene:Hs.26613 DNASU:113251 GeneID:113251 KEGG:hsa:113251
CTD:113251 HGNC:HGNC:24320 PharmGKB:PA142671566 ChiTaRS:LARP4
GenomeRNAi:113251 NextBio:78808 RefSeq:NP_001164275.1 EMBL:AY004310
IPI:IPI01012507 SMR:Q96J85 STRING:Q96J85 Ensembl:ENST00000518561
HOVERGEN:HBG062469 Uniprot:Q96J85
Length = 375
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 90/133 (67%), Positives = 116/133 (87%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENL+ D YL+SQMD+DQ++PIWTVAN ++KKLT D LI EVLR SP VQVDE+G KV
Sbjct: 63 RENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKV 122
Query: 74 RPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAY 133
RP+HKRCIVILREIP++TP+EE++GLF ++CP+ ISCEFAHN++WYITF++D DAQ+A+
Sbjct: 123 RPSHKRCIVILREIPETTPIEEVKGLFKSENCPKVISCEFAHNSNWYITFQSDTDAQQAF 182
Query: 134 RYLREDVREFQNK 146
+YLRE+V+ FQ K
Sbjct: 183 KYLREEVKTFQGK 195
>UNIPROTKB|F1MHD9 [details] [associations]
symbol:LARP4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022604 "regulation of cell morphogenesis"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
SMART:SM00360 GO:GO:0007010 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003676 GO:GO:0022604 InterPro:IPR006630 PROSITE:PS50961
Pfam:PF05383 SMART:SM00715 GeneTree:ENSGT00530000063417 OMA:WTIANME
EMBL:DAAA02012927 IPI:IPI01002357 Ensembl:ENSBTAT00000022821
Uniprot:F1MHD9
Length = 621
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 90/133 (67%), Positives = 115/133 (86%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENL+ D YL+SQMD+DQ+VPIWTVAN ++KKLT D LI EVLR SP VQVDE+G KV
Sbjct: 132 RENLSKDLYLISQMDSDQFVPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKV 191
Query: 74 RPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAY 133
RP+HKRCIVILREIP++TP+EE++ LF ++CP+ ISCEFAHN++WYITF++D DAQ+A+
Sbjct: 192 RPSHKRCIVILREIPETTPIEEVKALFKNENCPKVISCEFAHNSNWYITFQSDTDAQQAF 251
Query: 134 RYLREDVREFQNK 146
+YLRE+V+ FQ K
Sbjct: 252 KYLREEVKTFQGK 264
>UNIPROTKB|E2R028 [details] [associations]
symbol:LARP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022604 "regulation of cell morphogenesis"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
SMART:SM00360 GO:GO:0007010 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003676 GO:GO:0022604 InterPro:IPR006630 PROSITE:PS50961
Pfam:PF05383 SMART:SM00715 GeneTree:ENSGT00530000063417 CTD:113251
EMBL:AAEX03015048 EMBL:AAEX03015046 EMBL:AAEX03015047
RefSeq:XP_534803.2 Ensembl:ENSCAFT00000013044 GeneID:477609
KEGG:cfa:477609 Uniprot:E2R028
Length = 721
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 89/133 (66%), Positives = 115/133 (86%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENL+ D YL+SQMD+DQ++PIWTVAN ++KKLT D LI EVLR SP VQVDE+G KV
Sbjct: 130 RENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKV 189
Query: 74 RPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAY 133
RP+HKRCIVILREIP++TP+EE++ LF ++CP+ ISCEFAHN++WYITF++D DAQ+A+
Sbjct: 190 RPSHKRCIVILREIPETTPIEEVKALFKNENCPKVISCEFAHNSNWYITFQSDTDAQQAF 249
Query: 134 RYLREDVREFQNK 146
+YLRE+V+ FQ K
Sbjct: 250 KYLREEVKTFQGK 262
>UNIPROTKB|F1PIU8 [details] [associations]
symbol:LARP4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 SMART:SM00360 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 InterPro:IPR006630 PROSITE:PS50961
Pfam:PF05383 SMART:SM00715 GeneTree:ENSGT00530000063417 OMA:WTIANME
EMBL:AAEX03015048 EMBL:AAEX03015046 EMBL:AAEX03015047
Ensembl:ENSCAFT00000013013 Uniprot:F1PIU8
Length = 723
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 89/133 (66%), Positives = 115/133 (86%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENL+ D YL+SQMD+DQ++PIWTVAN ++KKLT D LI EVLR SP VQVDE+G KV
Sbjct: 132 RENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKV 191
Query: 74 RPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAY 133
RP+HKRCIVILREIP++TP+EE++ LF ++CP+ ISCEFAHN++WYITF++D DAQ+A+
Sbjct: 192 RPSHKRCIVILREIPETTPIEEVKALFKNENCPKVISCEFAHNSNWYITFQSDTDAQQAF 251
Query: 134 RYLREDVREFQNK 146
+YLRE+V+ FQ K
Sbjct: 252 KYLREEVKTFQGK 264
>UNIPROTKB|F1SH87 [details] [associations]
symbol:LARP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022604 "regulation of cell morphogenesis"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000504
SMART:SM00360 GO:GO:0007010 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003676 GO:GO:0022604 InterPro:IPR006630 PROSITE:PS50961
Pfam:PF05383 SMART:SM00715 GeneTree:ENSGT00530000063417
EMBL:AEMK01178304 EMBL:CU856260 EMBL:CU984599
Ensembl:ENSSSCT00000000235 OMA:CKEYEIM Uniprot:F1SH87
Length = 699
Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
Identities = 89/133 (66%), Positives = 115/133 (86%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENL+ D YL+SQMD+DQ++PIWTVAN ++KKLT D LI EVLR SP VQVDE+G KV
Sbjct: 131 RENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKV 190
Query: 74 RPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAY 133
RP+HKRCIVILREIP++TP+EE++ LF ++CP+ ISCEFAHN++WYITF++D DAQ+A+
Sbjct: 191 RPSHKRCIVILREIPETTPIEEVKALFKNENCPKVISCEFAHNSNWYITFQSDTDAQQAF 250
Query: 134 RYLREDVREFQNK 146
+YLRE+V+ FQ K
Sbjct: 251 KYLREEVKTFQGK 263
>UNIPROTKB|H9KZD5 [details] [associations]
symbol:LARP4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0022604
"regulation of cell morphogenesis" evidence=IEA] InterPro:IPR000504
SMART:SM00360 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
GeneTree:ENSGT00530000063417 OMA:WTIANME EMBL:AADN02072425
EMBL:AADN02072426 Ensembl:ENSGALT00000009951 Uniprot:H9KZD5
Length = 750
Score = 512 (185.3 bits), Expect = 6.8e-49, P = 6.8e-49
Identities = 88/133 (66%), Positives = 114/133 (85%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENL+ D YL+SQMD+DQ+VPIWT+AN +KKLT D+ LI +VLR SP VQVDE G KV
Sbjct: 133 RENLSKDLYLMSQMDSDQFVPIWTIANMEGIKKLTTDMDLILDVLRSSPMVQVDETGEKV 192
Query: 74 RPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAY 133
RPNHKRCI+ILREIP++TP+EE++ LF ++CP+ ISCEFAHNN+WY+TF++D DAQ+A+
Sbjct: 193 RPNHKRCIIILREIPETTPVEEVKALFKNENCPKVISCEFAHNNNWYVTFQSDTDAQQAF 252
Query: 134 RYLREDVREFQNK 146
+YLRE+V+ FQ K
Sbjct: 253 KYLREEVKTFQGK 265
>MGI|MGI:2443114 [details] [associations]
symbol:Larp4 "La ribonucleoprotein domain family, member 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0007010 "cytoskeleton organization" evidence=ISO]
[GO:0022604 "regulation of cell morphogenesis" evidence=ISO]
InterPro:IPR000504 PROSITE:PS50102 SMART:SM00360 MGI:MGI:2443114
GO:GO:0007010 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723
GO:GO:0022604 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 eggNOG:NOG327281 HOGENOM:HOG000004803
HOVERGEN:HBG055137 CTD:113251 EMBL:AK049756 EMBL:AK141743
IPI:IPI00828620 RefSeq:NP_001019697.2 UniGene:Mm.28811
UniGene:Mm.490671 ProteinModelPortal:Q8BWW4 SMR:Q8BWW4
PhosphoSite:Q8BWW4 PaxDb:Q8BWW4 PRIDE:Q8BWW4 GeneID:207214
KEGG:mmu:207214 UCSC:uc007xql.1 InParanoid:Q8BWW4 OrthoDB:EOG44MXRZ
NextBio:371897 CleanEx:MM_LARP4 Genevestigator:Q8BWW4
GermOnline:ENSMUSG00000023025 Uniprot:Q8BWW4
Length = 719
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 89/133 (66%), Positives = 115/133 (86%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENL+ D YL+SQMD+DQ+VPIWTVAN ++KKLT + LI EVLR SP VQVDE+G KV
Sbjct: 129 RENLSKDLYLISQMDSDQFVPIWTVANMEEIKKLTTNTDLILEVLRSSPMVQVDEKGEKV 188
Query: 74 RPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAY 133
RP+HKRCIVILREIP++TP+EE++ LF ++CP+ ISCEFAHN++WYITF++D DAQ+A+
Sbjct: 189 RPSHKRCIVILREIPETTPVEEVKALFKNENCPKVISCEFAHNSNWYITFQSDTDAQQAF 248
Query: 134 RYLREDVREFQNK 146
+YLRE+V+ FQ K
Sbjct: 249 KYLREEVKTFQGK 261
>UNIPROTKB|I3LLE0 [details] [associations]
symbol:LARP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 SMART:SM00360 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 InterPro:IPR006630 PROSITE:PS50961
Pfam:PF05383 SMART:SM00715 GeneTree:ENSGT00530000063417 OMA:WTIANME
EMBL:AEMK01178304 EMBL:CU856260 EMBL:CU984599
Ensembl:ENSSSCT00000025921 Uniprot:I3LLE0
Length = 594
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 88/132 (66%), Positives = 114/132 (86%)
Query: 15 ENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKVR 74
ENL+ D YL+SQMD+DQ++PIWTVAN ++KKLT D LI EVLR SP VQVDE+G KVR
Sbjct: 2 ENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKVR 61
Query: 75 PNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAYR 134
P+HKRCIVILREIP++TP+EE++ LF ++CP+ ISCEFAHN++WYITF++D DAQ+A++
Sbjct: 62 PSHKRCIVILREIPETTPIEEVKALFKNENCPKVISCEFAHNSNWYITFQSDTDAQQAFK 121
Query: 135 YLREDVREFQNK 146
YLRE+V+ FQ K
Sbjct: 122 YLREEVKTFQGK 133
>UNIPROTKB|K7GMK7 [details] [associations]
symbol:LARP4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 SMART:SM00360 Gene3D:1.10.10.10
InterPro:IPR011991 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 GeneTree:ENSGT00530000063417 EMBL:AEMK01178304
EMBL:CU856260 EMBL:CU984599 Ensembl:ENSSSCT00000034524
Uniprot:K7GMK7
Length = 314
Score = 505 (182.8 bits), Expect = 2.3e-48, P = 2.3e-48
Identities = 88/132 (66%), Positives = 114/132 (86%)
Query: 15 ENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKVR 74
ENL+ D YL+SQMD+DQ++PIWTVAN ++KKLT D LI EVLR SP VQVDE+G KVR
Sbjct: 2 ENLSKDLYLISQMDSDQFIPIWTVANMEEIKKLTTDPDLILEVLRSSPMVQVDEKGEKVR 61
Query: 75 PNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAYR 134
P+HKRCIVILREIP++TP+EE++ LF ++CP+ ISCEFAHN++WYITF++D DAQ+A++
Sbjct: 62 PSHKRCIVILREIPETTPIEEVKALFKNENCPKVISCEFAHNSNWYITFQSDTDAQQAFK 121
Query: 135 YLREDVREFQNK 146
YLRE+V+ FQ K
Sbjct: 122 YLREEVKTFQGK 133
>UNIPROTKB|F1M4K9 [details] [associations]
symbol:LOC683071 "Protein LOC683071" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 SMART:SM00360 GO:GO:0007010 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 GO:GO:0022604 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 IPI:IPI00952080
Ensembl:ENSRNOT00000065149 Uniprot:F1M4K9
Length = 574
Score = 499 (180.7 bits), Expect = 9.8e-48, P = 9.8e-48
Identities = 89/133 (66%), Positives = 114/133 (85%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENL+ D YL+SQMD+DQ+VPIWT+AN ++KKLT D LI EVLR SP VQVDE G KV
Sbjct: 29 RENLSKDLYLISQMDSDQFVPIWTIANMEEIKKLTTDPDLILEVLRSSPMVQVDE-GEKV 87
Query: 74 RPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAY 133
RP+HKRCIVILREIP++TP+EE++ LF ++CP+ ISCEFAHN++WYITF++D DAQ+A+
Sbjct: 88 RPSHKRCIVILREIPETTPVEEVKALFKNENCPKVISCEFAHNSNWYITFQSDTDAQQAF 147
Query: 134 RYLREDVREFQNK 146
+YLRE+V+ FQ K
Sbjct: 148 KYLREEVKTFQGK 160
>UNIPROTKB|F1P1X0 [details] [associations]
symbol:LARP4B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 SMART:SM00360 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 InterPro:IPR006630 PROSITE:PS50961
Pfam:PF05383 SMART:SM00715 OMA:LITPQTW GeneTree:ENSGT00530000063417
EMBL:AADN02000387 EMBL:AADN02000388 EMBL:AADN02000389
IPI:IPI00596468 Ensembl:ENSGALT00000010791 Uniprot:F1P1X0
Length = 764
Score = 489 (177.2 bits), Expect = 3.4e-46, P = 3.4e-46
Identities = 90/136 (66%), Positives = 113/136 (83%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENLA+D YL+SQMD+DQYVPI TVAN + VKKL+ D+ LI EVLR P VQVDE+G KV
Sbjct: 196 RENLASDMYLISQMDSDQYVPIMTVANLDHVKKLSTDMDLIVEVLRSLPLVQVDEKGEKV 255
Query: 74 RPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAY 133
RPN RCIVILRE+P+STP+EE+ LF G + P+FI+CEFA+N++W+ITFE++ DAQ+AY
Sbjct: 256 RPNQNRCIVILREVPESTPIEEVEALFKGDNLPKFINCEFAYNDNWFITFESEADAQQAY 315
Query: 134 RYLREDVREFQNKESK 149
RYLRE+V+ FQ K K
Sbjct: 316 RYLREEVKTFQGKPIK 331
>UNIPROTKB|F1MHX7 [details] [associations]
symbol:LARP4B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 SMART:SM00360 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 InterPro:IPR006630 PROSITE:PS50961
Pfam:PF05383 SMART:SM00715 OMA:LITPQTW GeneTree:ENSGT00530000063417
EMBL:DAAA02036020 IPI:IPI00688568 UniGene:Bt.45835
Ensembl:ENSBTAT00000018457 NextBio:20867284 Uniprot:F1MHX7
Length = 730
Score = 486 (176.1 bits), Expect = 5.0e-46, P = 5.0e-46
Identities = 90/136 (66%), Positives = 112/136 (82%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENLA+D YL+SQMD+DQYVPI TVAN + +KKL+ D+ LI EVLR P VQVDE+G KV
Sbjct: 167 RENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDMDLIVEVLRSLPLVQVDEKGEKV 226
Query: 74 RPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAY 133
RPN RCIVILREIP+STP+EE+ LF G + PRFI+CEFA+N++W+ITFE + DAQ+AY
Sbjct: 227 RPNQNRCIVILREIPESTPVEEVEALFKGDNLPRFINCEFAYNDNWFITFETEADAQQAY 286
Query: 134 RYLREDVREFQNKESK 149
+YLRE+V+ FQ K K
Sbjct: 287 KYLREEVKTFQGKPIK 302
>RGD|1310713 [details] [associations]
symbol:Larp4b "La ribonucleoprotein domain family, member 4B"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005829 "cytosol" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0042788
"polysomal ribosome" evidence=ISO] [GO:0045727 "positive regulation
of translation" evidence=ISO] InterPro:IPR000504 SMART:SM00360
RGD:1310713 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
IPI:IPI00778075 Ensembl:ENSRNOT00000021346 UCSC:RGD:1310713
ArrayExpress:D4ABE0 Uniprot:D4ABE0
Length = 656
Score = 480 (174.0 bits), Expect = 1.0e-45, P = 1.0e-45
Identities = 89/136 (65%), Positives = 111/136 (81%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENLA+D YL+SQMD+DQYVPI TVAN + +KKL+ D+ LI EVLR P VQVDE+G KV
Sbjct: 172 RENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVDEKGEKV 231
Query: 74 RPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAY 133
RPN RCIVILREI +STP+EE+ LF G + P+FI+CEFA+N++W+ITFE + DAQ+AY
Sbjct: 232 RPNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQAY 291
Query: 134 RYLREDVREFQNKESK 149
+YLRE+VR FQ K K
Sbjct: 292 KYLREEVRTFQGKPIK 307
>MGI|MGI:106330 [details] [associations]
symbol:Larp4b "La ribonucleoprotein domain family, member 4B"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=ISO] [GO:0010494 "cytoplasmic stress granule"
evidence=ISO] [GO:0042788 "polysomal ribosome" evidence=ISO]
[GO:0045727 "positive regulation of translation" evidence=ISO]
InterPro:IPR000504 PROSITE:PS50102 SMART:SM00360 MGI:MGI:106330
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
HSSP:Q71RC2 CTD:23185 eggNOG:NOG327281 HOGENOM:HOG000004803
OMA:LITPQTW OrthoDB:EOG4FN4HK ChiTaRS:LARP4B EMBL:AK172916
EMBL:AK042491 EMBL:AK080953 EMBL:AK160759 EMBL:BC078640
IPI:IPI00469235 IPI:IPI00620564 IPI:IPI00831428 RefSeq:NP_766173.1
UniGene:Mm.234944 UniGene:Mm.392515 ProteinModelPortal:Q6A0A2
SMR:Q6A0A2 PhosphoSite:Q6A0A2 PaxDb:Q6A0A2 PRIDE:Q6A0A2
Ensembl:ENSMUST00000091829 GeneID:217980 KEGG:mmu:217980
UCSC:uc007pkr.1 UCSC:uc007pks.1 UCSC:uc011ywb.1
GeneTree:ENSGT00530000063417 InParanoid:Q6A0A2 NextBio:376122
Bgee:Q6A0A2 CleanEx:MM_LARP5 Genevestigator:Q6A0A2 Uniprot:Q6A0A2
Length = 741
Score = 480 (174.0 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 89/136 (65%), Positives = 111/136 (81%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENLA+D YL+SQMD+DQYVPI TVAN + +KKL+ D+ LI EVLR P VQVDE+G KV
Sbjct: 172 RENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVDEKGEKV 231
Query: 74 RPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAY 133
RPN RCIVILREI +STP+EE+ LF G + P+FI+CEFA+N++W+ITFE + DAQ+AY
Sbjct: 232 RPNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQAY 291
Query: 134 RYLREDVREFQNKESK 149
+YLRE+VR FQ K K
Sbjct: 292 KYLREEVRTFQGKPIK 307
>UNIPROTKB|F1RX46 [details] [associations]
symbol:LARP4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 SMART:SM00360 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003676 InterPro:IPR006630 PROSITE:PS50961
Pfam:PF05383 SMART:SM00715 CTD:23185 OMA:LITPQTW
GeneTree:ENSGT00530000063417 EMBL:FP236728 EMBL:FP340182
RefSeq:XP_003130895.2 Ensembl:ENSSSCT00000012224 GeneID:100522458
KEGG:ssc:100522458 Uniprot:F1RX46
Length = 728
Score = 478 (173.3 bits), Expect = 3.9e-45, P = 3.9e-45
Identities = 89/136 (65%), Positives = 111/136 (81%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENLA+D YL+SQMD+DQYVPI TVAN + +KKL+ D+ LI EVLR P VQVDE+G KV
Sbjct: 167 RENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDMDLIVEVLRSLPLVQVDEKGEKV 226
Query: 74 RPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAY 133
RPN RCIVILREI +STP+EE+ LF G + P+FI+CEFA+N++W+ITFE + DAQ+AY
Sbjct: 227 RPNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQAY 286
Query: 134 RYLREDVREFQNKESK 149
RYLRE+V+ FQ K K
Sbjct: 287 RYLREEVKTFQGKPIK 302
>UNIPROTKB|Q92615 [details] [associations]
symbol:LARP4B "La-related protein 4B" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0010494 "cytoplasmic stress granule"
evidence=IDA] [GO:0042788 "polysomal ribosome" evidence=IDA]
[GO:0045727 "positive regulation of translation" evidence=IMP]
InterPro:IPR000504 PROSITE:PS50102 SMART:SM00360 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 EMBL:CH471072 EMBL:AL157709
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
EMBL:D86971 EMBL:AK292946 EMBL:AL359878 EMBL:BC131630 EMBL:BC152443
EMBL:CR749653 IPI:IPI00953461 RefSeq:NP_055970.1 UniGene:Hs.631814
PDB:3PTH PDBsum:3PTH ProteinModelPortal:Q92615 SMR:Q92615
IntAct:Q92615 STRING:Q92615 PhosphoSite:Q92615 DMDM:134034150
PaxDb:Q92615 PRIDE:Q92615 Ensembl:ENST00000316157
Ensembl:ENST00000412411 GeneID:23185 KEGG:hsa:23185 UCSC:uc001ifs.1
CTD:23185 GeneCards:GC10M000851 HGNC:HGNC:28987 HPA:HPA036566
neXtProt:NX_Q92615 PharmGKB:PA165548762 eggNOG:NOG327281
HOGENOM:HOG000004803 HOVERGEN:HBG055137 OMA:LITPQTW
OrthoDB:EOG4FN4HK ChiTaRS:LARP4B GenomeRNAi:23185 NextBio:44651
ArrayExpress:Q92615 Bgee:Q92615 CleanEx:HS_LARP5
Genevestigator:Q92615 Uniprot:Q92615
Length = 738
Score = 477 (173.0 bits), Expect = 5.7e-45, P = 5.7e-45
Identities = 88/136 (64%), Positives = 111/136 (81%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENLA+D YL+SQMD+DQYVPI TVAN + +KKL+ D+ LI EVLR P VQVDE+G KV
Sbjct: 170 RENLASDMYLISQMDSDQYVPITTVANLDHIKKLSTDVDLIVEVLRSLPLVQVDEKGEKV 229
Query: 74 RPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAY 133
RPN RCIVILREI +STP+EE+ LF G + P+FI+CEFA+N++W+ITFE + DAQ+AY
Sbjct: 230 RPNQNRCIVILREISESTPVEEVEALFKGDNLPKFINCEFAYNDNWFITFETEADAQQAY 289
Query: 134 RYLREDVREFQNKESK 149
+YLRE+V+ FQ K K
Sbjct: 290 KYLREEVKTFQGKPIK 305
>ZFIN|ZDB-GENE-061027-39 [details] [associations]
symbol:larp4b "La ribonucleoprotein domain family,
member 4B" species:7955 "Danio rerio" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] ZFIN:ZDB-GENE-061027-39 Gene3D:1.10.10.10
InterPro:IPR011991 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 CTD:23185 eggNOG:NOG327281 HOGENOM:HOG000004803
HOVERGEN:HBG055137 OrthoDB:EOG4FN4HK GeneTree:ENSGT00530000063417
EMBL:CR376848 EMBL:BC124489 EMBL:BC134834 IPI:IPI00805097
RefSeq:NP_001071030.1 UniGene:Dr.83457 SMR:Q05AJ1
Ensembl:ENSDART00000089506 GeneID:563742 KEGG:dre:563742
InParanoid:Q05AJ1 OMA:WEETAGH NextBio:20885045 Uniprot:Q05AJ1
Length = 723
Score = 470 (170.5 bits), Expect = 2.9e-44, P = 2.9e-44
Identities = 86/136 (63%), Positives = 112/136 (82%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENLAND YL+SQMD+DQYVPI T+AN +Q+KKLT D+ LI+++L+ P VQVD+ G KV
Sbjct: 158 RENLANDMYLISQMDSDQYVPIVTLANLDQIKKLTTDVDLISDILKTLPLVQVDKCGEKV 217
Query: 74 RPNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQKAY 133
RPN RCIVILREIP++TPLEE+ LF + P+FI+CEFA+N++W+ITFE++ DAQ AY
Sbjct: 218 RPNQNRCIVILREIPEATPLEEVEALFKSDNLPKFINCEFAYNDNWFITFESEADAQLAY 277
Query: 134 RYLREDVREFQNKESK 149
+YLRE+V+ FQ K K
Sbjct: 278 QYLREEVKTFQGKPIK 293
>DICTYBASE|DDB_G0289333 [details] [associations]
symbol:DDB_G0289333 species:44689 "Dictyostelium
discoideum" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 PROSITE:PS50102 SMART:SM00360
dictyBase:DDB_G0289333 GO:GO:0000166 Gene3D:3.30.70.330
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
EMBL:AAFI02000139 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 eggNOG:NOG327281 RefSeq:XP_636262.1
ProteinModelPortal:Q54HN9 EnsemblProtists:DDB0188365 GeneID:8627081
KEGG:ddi:DDB_G0289333 InParanoid:Q54HN9 OMA:YADMIAM
ProtClustDB:CLSZ2846640 Uniprot:Q54HN9
Length = 621
Score = 269 (99.8 bits), Expect = 1.8e-22, P = 1.8e-22
Identities = 59/138 (42%), Positives = 88/138 (63%)
Query: 14 RENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
RENL+ D YL S+M+N+ +V I +ANF VK LT D+ LI EV+ +S NV +DE +
Sbjct: 36 RENLSTDYYLTSRMNNEMFVAIEVIANFKMVKNLTTDMNLIVEVMSKSSNVIIDETKTLI 95
Query: 74 RPNHK--RCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSWYITFENDEDAQK 131
+P+ K R I+ILR+IP TP+EEIRG+FS ++ S N W+I F+ +EDA +
Sbjct: 96 KPSFKLQRNIIILRDIPTETPVEEIRGIFS-ETGKTISSVRSDIGNYWFIQFDKEEDALE 154
Query: 132 AYRYLREDVREFQNKESK 149
A+ ++ F++K+ K
Sbjct: 155 AHDQIKN--LTFKDKQIK 170
>UNIPROTKB|D6RFF0 [details] [associations]
symbol:LARP7 "La-related protein 7" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000504 InterPro:IPR002344
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 HOGENOM:HOG000113284
HGNC:HGNC:24912 ChiTaRS:LARP7 EMBL:AC106864 IPI:IPI00966774
ProteinModelPortal:D6RFF0 SMR:D6RFF0 Ensembl:ENST00000505034
ArrayExpress:D6RFF0 Bgee:D6RFF0 Uniprot:D6RFF0
Length = 299
Score = 127 (49.8 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 47/149 (31%), Positives = 67/149 (44%)
Query: 16 NLANDAYLLSQMDN--DQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
NL D +L Q++ D YV I + +FN++KKLT D KLI LR S V++D EG ++
Sbjct: 50 NLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRI 109
Query: 74 R---PNHKRC------IVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSW----- 119
R P +R V + +P + I +F GK C + H S
Sbjct: 110 RRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVF-GK-CGNVVYISIPHYKSTGDPKG 167
Query: 120 --YITFENDEDAQKAYRYLREDVREFQNK 146
++ FE E A KA +L E K
Sbjct: 168 FAFVEFETKEQAAKAIEFLNNPPEEAPRK 196
>TAIR|locus:2125334 [details] [associations]
symbol:LARP1c "La related protein 1c" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0048523 "negative regulation of cellular process" evidence=RCA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0010150 "leaf senescence"
evidence=IMP] GO:GO:0005737 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0010150
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
EMBL:AF370207 EMBL:AY133869 IPI:IPI00542126 RefSeq:NP_567991.1
UniGene:At.23352 UniGene:At.70045 ProteinModelPortal:Q94K80
SMR:Q94K80 PRIDE:Q94K80 EnsemblPlants:AT4G35890.1 GeneID:829743
KEGG:ath:AT4G35890 TAIR:At4g35890 HOGENOM:HOG000151189
InParanoid:Q94K80 OMA:MSPRRIS PhylomeDB:Q94K80
ProtClustDB:CLSN2917672 Genevestigator:Q94K80 Uniprot:Q94K80
Length = 523
Score = 130 (50.8 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 30/74 (40%), Positives = 45/74 (60%)
Query: 15 ENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKVR 74
ENL D YL M+N+ +VP+ VA F +V +LT +I+ I E L+ SP+V+V + I+ R
Sbjct: 384 ENLITDIYLRGFMNNEGFVPLRVVAGFKKVAELTDNIQQIVEALQNSPHVEVQGDFIRKR 443
Query: 75 PNHKRCIVILREIP 88
N + + LR P
Sbjct: 444 DNWQNWV--LRRNP 455
>DICTYBASE|DDB_G0281763 [details] [associations]
symbol:DDB_G0281763 "Lupus La protein" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002344
InterPro:IPR012677 PRINTS:PR00302 SMART:SM00360
dictyBase:DDB_G0281763 GO:GO:0005634 GO:GO:0045335 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 EMBL:AAFI02000042 GO:GO:0030529
InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193 KO:K11090
Pfam:PF05383 SMART:SM00715 InterPro:IPR014886 Pfam:PF08777
RefSeq:XP_640625.1 ProteinModelPortal:Q54TG6 STRING:Q54TG6
EnsemblProtists:DDB0233755 GeneID:8623235 KEGG:ddi:DDB_G0281763
InParanoid:Q54TG6 OMA:NDDANAC ProtClustDB:CLSZ2430537
Uniprot:Q54TG6
Length = 354
Score = 127 (49.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 37/131 (28%), Positives = 65/131 (49%)
Query: 16 NLANDAYLLSQMDN--DQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
N D +L S+ D Y+ I +A+FN++K ++ D++LITE L++S +QV E+G V
Sbjct: 21 NFPRDKFLRSEAAKNVDNYISIDVIASFNRMKTISTDLQLITEALKKSTRLQVSEDGKMV 80
Query: 74 R-----PNHKRCIVIL--REIPDSTPLEEIRGLFSGKSCPRFISCEF------AHNNSWY 120
R P + C L + P+ T +E+++ F+ + +S + S+
Sbjct: 81 RRLDPLPENIDCGKTLYSKGWPEDTTIEKVQEFFNANGGYKVVSVRLRKKSDKSFKGSFL 140
Query: 121 ITFENDEDAQK 131
FE +E K
Sbjct: 141 ADFETEEIVNK 151
>TAIR|locus:2170478 [details] [associations]
symbol:LARP6a "La related protein 6a" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0048193
"Golgi vesicle transport" evidence=RCA] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.30.70.330
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723 GO:GO:0006396
GO:GO:0030529 HSSP:P19339 InterPro:IPR006630 PROSITE:PS50961
Pfam:PF05383 SMART:SM00715 KO:K15191 HOGENOM:HOG000244026
EMBL:AY050403 EMBL:BT000588 IPI:IPI00526923 RefSeq:NP_851141.1
UniGene:At.9180 ProteinModelPortal:Q94A38 SMR:Q94A38 IntAct:Q94A38
STRING:Q94A38 PRIDE:Q94A38 EnsemblPlants:AT5G46250.1 GeneID:834667
KEGG:ath:AT5G46250 TAIR:At5g46250 InParanoid:Q94A38 OMA:WRNGMRV
PhylomeDB:Q94A38 ProtClustDB:CLSN2680453 Genevestigator:Q94A38
Uniprot:Q94A38
Length = 422
Score = 128 (50.1 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 37/100 (37%), Positives = 58/100 (58%)
Query: 15 ENLANDAYLLSQMDNDQ--YVPIWTVANFNQVKKLTKDIKLITEVLRESPN--VQVDEEG 70
ENL D +LL+ M ++ +VPI T+A F+++KKLT+D LI L+ES V DE+
Sbjct: 118 ENLPTDKFLLNAMKRNKKGFVPISTIATFHKMKKLTRDHALIVSALKESSFLVVSADEKK 177
Query: 71 IK-VRP-----NHKRCIVILREIPDSTPLEEIRGLFSGKS 104
+K + P + K V++ +P+ E IR +F GK+
Sbjct: 178 VKRLSPLPEIRDPKIFTVLVENLPEDHSNENIREIF-GKA 216
>UNIPROTKB|D6RAF3 [details] [associations]
symbol:LARP7 "La-related protein 7" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR002344 PRINTS:PR00302
GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 HGNC:HGNC:24912
ChiTaRS:LARP7 EMBL:AC106864 IPI:IPI00966387
ProteinModelPortal:D6RAF3 SMR:D6RAF3 Ensembl:ENST00000507443
HOGENOM:HOG000213946 ArrayExpress:D6RAF3 Bgee:D6RAF3 Uniprot:D6RAF3
Length = 129
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 16 NLANDAYLLSQMDN--DQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
NL D +L Q++ D YV I + +FN++KKLT D KLI LR S V++D EG ++
Sbjct: 50 NLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRI 109
Query: 74 R 74
R
Sbjct: 110 R 110
>UNIPROTKB|D6RF49 [details] [associations]
symbol:LARP7 "La-related protein 7" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR002344 PRINTS:PR00302
GO:GO:0005634 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 HGNC:HGNC:24912
ChiTaRS:LARP7 EMBL:AC106864 IPI:IPI00967495
ProteinModelPortal:D6RF49 SMR:D6RF49 Ensembl:ENST00000508577
ArrayExpress:D6RF49 Bgee:D6RF49 Uniprot:D6RF49
Length = 119
Score = 117 (46.2 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 16 NLANDAYLLSQMDN--DQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
NL D +L Q++ D YV I + +FN++KKLT D KLI LR S V++D EG ++
Sbjct: 50 NLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRI 109
Query: 74 R 74
R
Sbjct: 110 R 110
>UNIPROTKB|F1NJ86 [details] [associations]
symbol:LARP7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
GeneTree:ENSGT00530000063464 EMBL:AADN02009328 IPI:IPI00598515
Ensembl:ENSGALT00000032138 ArrayExpress:F1NJ86 Uniprot:F1NJ86
Length = 233
Score = 120 (47.3 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 46/149 (30%), Positives = 70/149 (46%)
Query: 16 NLANDAYLLSQMDN--DQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
NL D +L Q++ D YV I + +FN++KKLT D KLI ++ S V++D EG ++
Sbjct: 52 NLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARAVKSSSVVELDLEGTRI 111
Query: 74 R---PNHKRC------IVILREIPDSTPLEEIRGLFSGK-------SCPRFISCEFAHNN 117
R P +R V + +P + I +F GK S PR+ S
Sbjct: 112 RRRRPLGERPKDVDSRTVYVELLPKNVNHSWIERVF-GKCGNVVYVSIPRYKSTGDPKGF 170
Query: 118 SWYITFENDEDAQKAYRYLREDVREFQNK 146
+ ++ FE E A+KA +L E K
Sbjct: 171 A-FVEFETKEQAEKAIEFLNNPPEEAPRK 198
>UNIPROTKB|Q4G0J3 [details] [associations]
symbol:LARP7 "La-related protein 7" species:9606 "Homo
sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006396
"RNA processing" evidence=IEA] [GO:0030529 "ribonucleoprotein
complex" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000504 InterPro:IPR002344 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102 SMART:SM00360
GO:GO:0005634 GO:GO:0005737 GO:GO:0005654 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 EMBL:CH471057
InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193 Pfam:PF05383
SMART:SM00715 HSSP:P05455 CTD:51574 HOGENOM:HOG000113284
HOVERGEN:HBG081891 KO:K15191 OrthoDB:EOG4TXBS0 InterPro:IPR014886
Pfam:PF08777 EMBL:EU667388 EMBL:AF068284 EMBL:BC066945
EMBL:BC107709 EMBL:AL049996 IPI:IPI00294742 IPI:IPI00395536
PIR:T08692 RefSeq:NP_001253968.1 RefSeq:NP_056269.1
RefSeq:NP_057732.2 UniGene:Hs.713663 ProteinModelPortal:Q4G0J3
SMR:Q4G0J3 DIP:DIP-47624N IntAct:Q4G0J3 MINT:MINT-4540675
STRING:Q4G0J3 PhosphoSite:Q4G0J3 DMDM:121945944 PaxDb:Q4G0J3
PRIDE:Q4G0J3 Ensembl:ENST00000324052 Ensembl:ENST00000344442
Ensembl:ENST00000509061 GeneID:51574 KEGG:hsa:51574 UCSC:uc003iay.3
GeneCards:GC04P113559 HGNC:HGNC:24912 HPA:HPA026842 HPA:HPA027930
MIM:612026 neXtProt:NX_Q4G0J3 PharmGKB:PA145148525
InParanoid:Q4G0J3 ChiTaRS:LARP7 GenomeRNAi:51574 NextBio:55403
ArrayExpress:Q4G0J3 Bgee:Q4G0J3 CleanEx:HS_LARP7
Genevestigator:Q4G0J3 Uniprot:Q4G0J3
Length = 582
Score = 127 (49.8 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 47/149 (31%), Positives = 67/149 (44%)
Query: 16 NLANDAYLLSQMDN--DQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
NL D +L Q++ D YV I + +FN++KKLT D KLI LR S V++D EG ++
Sbjct: 50 NLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALRSSAVVELDLEGTRI 109
Query: 74 R---PNHKRC------IVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSW----- 119
R P +R V + +P + I +F GK C + H S
Sbjct: 110 RRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVF-GK-CGNVVYISIPHYKSTGDPKG 167
Query: 120 --YITFENDEDAQKAYRYLREDVREFQNK 146
++ FE E A KA +L E K
Sbjct: 168 FAFVEFETKEQAAKAIEFLNNPPEEAPRK 196
>MGI|MGI:107634 [details] [associations]
symbol:Larp7 "La ribonucleoprotein domain family, member 7"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0035562 "negative regulation of chromatin binding"
evidence=IGI] [GO:0036093 "germ cell proliferation" evidence=IMP]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=IMP] InterPro:IPR000504 InterPro:IPR002344
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102
SMART:SM00360 MGI:MGI:107634 GO:GO:0005654 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 eggNOG:COG5193 Pfam:PF05383 SMART:SM00715 CTD:51574
HOVERGEN:HBG081891 KO:K15191 OrthoDB:EOG4TXBS0 InterPro:IPR014886
Pfam:PF08777 ChiTaRS:LARP7 EMBL:AC113952 EMBL:BC020127
EMBL:BC023165 EMBL:BC029178 EMBL:AK012726 EMBL:AK012772
EMBL:AK015041 EMBL:AK162147 IPI:IPI00340860 IPI:IPI00831552
RefSeq:NP_613059.2 UniGene:Mm.291032 ProteinModelPortal:Q05CL8
SMR:Q05CL8 IntAct:Q05CL8 STRING:Q05CL8 PhosphoSite:Q05CL8
PaxDb:Q05CL8 PRIDE:Q05CL8 DNASU:28036 Ensembl:ENSMUST00000029588
GeneID:28036 KEGG:mmu:28036 UCSC:uc008rhd.1
GeneTree:ENSGT00530000063464 InParanoid:Q05CL8 OMA:NNPPEDA
NextBio:306558 Bgee:Q05CL8 CleanEx:MM_LARP7 Genevestigator:Q05CL8
Uniprot:Q05CL8
Length = 570
Score = 126 (49.4 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 45/149 (30%), Positives = 67/149 (44%)
Query: 16 NLANDAYLLSQMDN--DQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
NL D +L Q++ D YV I + +FN++KKLT D KLI L+ S V++D EG ++
Sbjct: 44 NLHKDKFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVELDLEGTRI 103
Query: 74 R---P------NHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSW----- 119
R P + + V + +P + I +F GK C + H S
Sbjct: 104 RRKKPLGERPKDEEERTVYVELLPKNVTHSWIERVF-GK-CGNVVYISIPHYKSTGDPKG 161
Query: 120 --YITFENDEDAQKAYRYLREDVREFQNK 146
++ FE E A KA +L E K
Sbjct: 162 FAFVEFETKEQAAKAIEFLNNPPEEAPRK 190
>RGD|1592474 [details] [associations]
symbol:Larp7 "La ribonucleoprotein domain family, member 7"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005654 "nucleoplasm" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0035562
"negative regulation of chromatin binding" evidence=ISO]
[GO:0036093 "germ cell proliferation" evidence=ISO] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=ISO] InterPro:IPR000504 InterPro:IPR002344
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102
SMART:SM00360 RGD:1592474 GO:GO:0005737 GO:GO:0005654 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 eggNOG:COG5193 Pfam:PF05383 SMART:SM00715
HSSP:Q7YZ92 CTD:51574 HOVERGEN:HBG081891 KO:K15191
OrthoDB:EOG4TXBS0 InterPro:IPR014886 Pfam:PF08777 EMBL:BC083898
IPI:IPI00389960 RefSeq:NP_001037755.2 UniGene:Rn.79854
ProteinModelPortal:Q5XI01 STRING:Q5XI01 PhosphoSite:Q5XI01
PRIDE:Q5XI01 GeneID:686883 KEGG:rno:686883 NextBio:732906
ArrayExpress:Q5XI01 Genevestigator:Q5XI01 Uniprot:Q5XI01
Length = 571
Score = 126 (49.4 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 45/149 (30%), Positives = 67/149 (44%)
Query: 16 NLANDAYLLSQMDN--DQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
NL D +L Q++ D YV I + +FN++KKLT D KLI L+ S V++D EG ++
Sbjct: 45 NLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVELDLEGTRI 104
Query: 74 R---P------NHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSW----- 119
R P + + V + +P + I +F GK C + H S
Sbjct: 105 RRKKPLGERPKDEEERTVYVELLPKNVTHSWIERVF-GK-CGNVVYISIPHYKSTGDPKG 162
Query: 120 --YITFENDEDAQKAYRYLREDVREFQNK 146
++ FE E A KA +L E K
Sbjct: 163 FAFVEFETKEQAAKAIEFLNNPPEEAPRK 191
>UNIPROTKB|Q5XI01 [details] [associations]
symbol:Larp7 "La-related protein 7" species:10116 "Rattus
norvegicus" [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002344 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102 SMART:SM00360
RGD:1592474 GO:GO:0005737 GO:GO:0005654 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 eggNOG:COG5193 Pfam:PF05383 SMART:SM00715
HSSP:Q7YZ92 CTD:51574 HOVERGEN:HBG081891 KO:K15191
OrthoDB:EOG4TXBS0 InterPro:IPR014886 Pfam:PF08777 EMBL:BC083898
IPI:IPI00389960 RefSeq:NP_001037755.2 UniGene:Rn.79854
ProteinModelPortal:Q5XI01 STRING:Q5XI01 PhosphoSite:Q5XI01
PRIDE:Q5XI01 GeneID:686883 KEGG:rno:686883 NextBio:732906
ArrayExpress:Q5XI01 Genevestigator:Q5XI01 Uniprot:Q5XI01
Length = 571
Score = 126 (49.4 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 45/149 (30%), Positives = 67/149 (44%)
Query: 16 NLANDAYLLSQMDN--DQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
NL D +L Q++ D YV I + +FN++KKLT D KLI L+ S V++D EG ++
Sbjct: 45 NLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVELDLEGTRI 104
Query: 74 R---P------NHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSW----- 119
R P + + V + +P + I +F GK C + H S
Sbjct: 105 RRKKPLGERPKDEEERTVYVELLPKNVTHSWIERVF-GK-CGNVVYISIPHYKSTGDPKG 162
Query: 120 --YITFENDEDAQKAYRYLREDVREFQNK 146
++ FE E A KA +L E K
Sbjct: 163 FAFVEFETKEQAAKAIEFLNNPPEEAPRK 191
>UNIPROTKB|I3LNK9 [details] [associations]
symbol:I3LNK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 InterPro:IPR014886
Pfam:PF08777 GeneTree:ENSGT00530000063464
Ensembl:ENSSSCT00000031777 OMA:NASEECE Uniprot:I3LNK9
Length = 580
Score = 125 (49.1 bits), Expect = 5.1e-07, P = 5.1e-07
Identities = 46/149 (30%), Positives = 67/149 (44%)
Query: 16 NLANDAYLLSQMDN--DQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
NL D +L Q++ D YV I + +FN++KKLT D KLI L+ S V++D EG ++
Sbjct: 50 NLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDRKLIARALKSSAVVELDLEGTRI 109
Query: 74 R---PNHKRC------IVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSW----- 119
R P +R V + +P + I +F GK C + H S
Sbjct: 110 RRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVF-GK-CGNVVYISIPHYKSTGDPKG 167
Query: 120 --YITFENDEDAQKAYRYLREDVREFQNK 146
++ FE E A KA +L E K
Sbjct: 168 FAFVEFETKEQAAKAIEFLNNPPEEAPRK 196
>UNIPROTKB|F1S150 [details] [associations]
symbol:LARP7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 InterPro:IPR014886
Pfam:PF08777 GeneTree:ENSGT00530000063464 OMA:NNPPEDA EMBL:FP236150
Ensembl:ENSSSCT00000009986 Uniprot:F1S150
Length = 582
Score = 125 (49.1 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 46/149 (30%), Positives = 67/149 (44%)
Query: 16 NLANDAYLLSQMDN--DQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
NL D +L Q++ D YV I + +FN++KKLT D KLI L+ S V++D EG ++
Sbjct: 50 NLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDRKLIARALKSSAVVELDLEGTRI 109
Query: 74 R---PNHKRC------IVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSW----- 119
R P +R V + +P + I +F GK C + H S
Sbjct: 110 RRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVF-GK-CGNVVYISIPHYKSTGDPKG 167
Query: 120 --YITFENDEDAQKAYRYLREDVREFQNK 146
++ FE E A KA +L E K
Sbjct: 168 FAFVEFETKEQAAKAIEFLNNPPEEAPRK 196
>UNIPROTKB|Q659C4 [details] [associations]
symbol:LARP1B "La-related protein 1B" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 InterPro:IPR006630 PROSITE:PS50961
eggNOG:COG5193 Pfam:PF05383 SMART:SM00715 EMBL:AK001240
EMBL:AK027164 EMBL:AK092764 EMBL:AK098437 EMBL:AL137759
EMBL:AL832170 EMBL:BX537937 EMBL:AC096898 EMBL:AC099340
EMBL:AC108045 EMBL:AC114735 EMBL:AC124030 EMBL:BC030516
EMBL:BC050654 EMBL:BC062606 EMBL:BC110300 IPI:IPI00383949
IPI:IPI00855721 IPI:IPI00855786 IPI:IPI00855812 IPI:IPI00855930
IPI:IPI00855953 IPI:IPI00856120 IPI:IPI00940348 IPI:IPI00943149
RefSeq:NP_060548.2 RefSeq:NP_115615.2 RefSeq:NP_835144.1
UniGene:Hs.657067 HSSP:Q71RC2 ProteinModelPortal:Q659C4 SMR:Q659C4
DIP:DIP-47319N IntAct:Q659C4 PhosphoSite:Q659C4 DMDM:158564329
PaxDb:Q659C4 PRIDE:Q659C4 DNASU:55132 Ensembl:ENST00000264584
Ensembl:ENST00000326639 Ensembl:ENST00000354456
Ensembl:ENST00000394288 Ensembl:ENST00000441387 GeneID:55132
KEGG:hsa:55132 UCSC:uc003ifw.1 UCSC:uc003iga.3 UCSC:uc003igc.3
UCSC:uc003igf.3 CTD:55132 GeneCards:GC04P128983 HGNC:HGNC:24704
HPA:HPA036280 neXtProt:NX_Q659C4 PharmGKB:PA165664174
InParanoid:Q659C4 OMA:PPYVKKH OrthoDB:EOG4PZJ64 PhylomeDB:Q659C4
ChiTaRS:LARP1B GenomeRNAi:55132 NextBio:58806 ArrayExpress:Q659C4
Bgee:Q659C4 CleanEx:HS_LARP2 Genevestigator:Q659C4
InterPro:IPR006607 SMART:SM00684 Uniprot:Q659C4
Length = 914
Score = 117 (46.2 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 29/95 (30%), Positives = 50/95 (52%)
Query: 15 ENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKVR 74
ENL D +L +MD ++PI +A F +V+ LT ++ LI E L++S V++ +E ++ +
Sbjct: 230 ENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKK 289
Query: 75 PNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFI 109
++ I P S P + L CP F+
Sbjct: 290 IEPEKW-PIPGPPPRSVPPTDFSQLID---CPEFV 320
Score = 34 (17.0 bits), Expect = 5.9e-07, Sum P(2) = 5.9e-07
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 127 EDAQKAYRY 135
EDA++ YRY
Sbjct: 763 EDAKENYRY 771
>UNIPROTKB|F1MR14 [details] [associations]
symbol:F1MR14 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR002344
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 InterPro:IPR014886
Pfam:PF08777 GeneTree:ENSGT00530000063464 OMA:NNPPEDA
EMBL:DAAA02016483 EMBL:DAAA02016480 EMBL:DAAA02016481
EMBL:DAAA02016482 IPI:IPI00691372 Ensembl:ENSBTAT00000012693
ArrayExpress:F1MR14 Uniprot:F1MR14
Length = 578
Score = 124 (48.7 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 46/149 (30%), Positives = 67/149 (44%)
Query: 16 NLANDAYLLSQMDN--DQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
NL D +L Q++ D YV I + +FN++KKLT D KLI L+ S V++D EG ++
Sbjct: 48 NLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSAVVELDLEGTRI 107
Query: 74 R---PNHKRC------IVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSW----- 119
R P +R V + +P + I +F GK C + H S
Sbjct: 108 RRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVF-GK-CGNVVYISIPHYKSTGDPKG 165
Query: 120 --YITFENDEDAQKAYRYLREDVREFQNK 146
++ FE E A KA +L E K
Sbjct: 166 FAFVEFETKEQAAKAIEFLNNPPEEAPRK 194
>UNIPROTKB|E2QW27 [details] [associations]
symbol:LARP7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000504 InterPro:IPR002344
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 InterPro:IPR014886
Pfam:PF08777 GeneTree:ENSGT00530000063464 OMA:NNPPEDA
EMBL:AAEX03016829 ProteinModelPortal:E2QW27
Ensembl:ENSCAFT00000018607 Uniprot:E2QW27
Length = 582
Score = 124 (48.7 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 46/149 (30%), Positives = 67/149 (44%)
Query: 16 NLANDAYLLSQMDN--DQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
NL D +L Q++ D YV I + +FN++KKLT D KLI L+ S V++D EG ++
Sbjct: 49 NLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARALKSSSVVELDLEGTRI 108
Query: 74 R---PNHKRC------IVILREIPDSTPLEEIRGLFSGKSCPRFISCEFAHNNSW----- 119
R P +R V + +P + I +F GK C + H S
Sbjct: 109 RRKKPLGERPKDEDERTVYVELLPKNVNHSWIERVF-GK-CGNVVYISIPHYKSTGDPKG 166
Query: 120 --YITFENDEDAQKAYRYLREDVREFQNK 146
++ FE E A KA +L E K
Sbjct: 167 FAFVEFETKEQAAKAIEFLNNPPEEAPRK 195
>RGD|1306683 [details] [associations]
symbol:Larp1 "La ribonucleoprotein domain family, member 1"
species:10116 "Rattus norvegicus" [GO:0016239 "positive regulation
of macroautophagy" evidence=ISO] RGD:1306683 Gene3D:1.10.10.10
InterPro:IPR011991 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 InterPro:IPR006607 SMART:SM00684
GeneTree:ENSGT00390000000523 IPI:IPI00369227 PRIDE:F1M062
Ensembl:ENSRNOT00000036959 Uniprot:F1M062
Length = 1024
Score = 115 (45.5 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 15 ENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKVR 74
+NL D +L +MD D ++PI +A+F++V+ LT DI LI L++S V++ EE ++ R
Sbjct: 345 DNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEMVEEKVRRR 404
Score = 36 (17.7 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 127 EDAQKAYRY 135
EDA++ YRY
Sbjct: 870 EDAKEGYRY 878
>ZFIN|ZDB-GENE-030131-6896 [details] [associations]
symbol:larp7 "La ribonucleoprotein domain family,
member 7" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000504 InterPro:IPR002344 InterPro:IPR012677
Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-030131-6896 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 eggNOG:COG5193 Pfam:PF05383 SMART:SM00715
EMBL:BC049455 IPI:IPI00509628 RefSeq:NP_956224.1 UniGene:Dr.29131
HSSP:Q7YZ92 ProteinModelPortal:Q7ZWE3 STRING:Q7ZWE3 PRIDE:Q7ZWE3
GeneID:334956 KEGG:dre:334956 CTD:51574 HOGENOM:HOG000113284
HOVERGEN:HBG081891 InParanoid:Q7ZWE3 KO:K15191 OrthoDB:EOG4TXBS0
NextBio:20810607 ArrayExpress:Q7ZWE3 InterPro:IPR014886
Pfam:PF08777 Uniprot:Q7ZWE3
Length = 555
Score = 123 (48.4 bits), Expect = 7.9e-07, P = 7.9e-07
Identities = 43/149 (28%), Positives = 68/149 (45%)
Query: 16 NLANDAYLLS--QMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
NL D ++ S + D Y+ I + FN++K LT D+KLI L+ S V+V++EG ++
Sbjct: 58 NLHKDRFMKSIIEQSRDGYIDIAVLTTFNRMKNLTADVKLIARALKNSTIVEVNDEGTRI 117
Query: 74 R--------PNHKRCIVILREI-PDSTPLEEIRGLFS--GK----SCPRFISCEFAHNNS 118
R P + E+ P + + +FS G S PR+ S H+
Sbjct: 118 RRKEPLGETPKDVDSRTVYVELLPKTVTHIWLERVFSKCGHVVYISIPRYKSTR--HSKG 175
Query: 119 W-YITFENDEDAQKAYRYLREDVREFQNK 146
+ ++ FE E AQKA L + K
Sbjct: 176 FAFVEFETQEQAQKAVEMLNNPPEDAPRK 204
>UNIPROTKB|F1MZU1 [details] [associations]
symbol:LARP1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016239 "positive regulation of macroautophagy"
evidence=IEA] Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016239
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
InterPro:IPR006607 SMART:SM00684 OMA:GSEPATY
GeneTree:ENSGT00390000000523 EMBL:DAAA02020719 IPI:IPI00714415
PRIDE:F1MZU1 Ensembl:ENSBTAT00000011109 Uniprot:F1MZU1
Length = 951
Score = 114 (45.2 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 23/60 (38%), Positives = 40/60 (66%)
Query: 15 ENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKVR 74
+NL D +L +MD D ++P+ +A+F++V+ LT DI LI L++S V++ EE ++ R
Sbjct: 273 DNLERDFFLRRKMDADGFLPMTLIASFHRVQALTTDISLIFAALKDSKVVEIVEEKVRRR 332
Score = 36 (17.7 bits), Expect = 8.3e-07, Sum P(2) = 8.3e-07
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 127 EDAQKAYRY 135
EDA++ YRY
Sbjct: 798 EDAKEGYRY 806
>UNIPROTKB|G3V0E9 [details] [associations]
symbol:LARP1B "La-related protein 1B" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 EMBL:CH471056
GO:GO:0030529 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 EMBL:AC096898 EMBL:AC099340 EMBL:AC108045
EMBL:AC114735 EMBL:AC124030 RefSeq:NP_115615.2 UniGene:Hs.657067
GeneID:55132 KEGG:hsa:55132 CTD:55132 HGNC:HGNC:24704
ChiTaRS:LARP1B GenomeRNAi:55132 NextBio:58806
ProteinModelPortal:G3V0E9 SMR:G3V0E9 PRIDE:G3V0E9
Ensembl:ENST00000432347 ArrayExpress:G3V0E9 Bgee:G3V0E9
Uniprot:G3V0E9
Length = 358
Score = 120 (47.3 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 33/114 (28%), Positives = 59/114 (51%)
Query: 15 ENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKVR 74
ENL D +L +MD ++PI +A F +V+ LT ++ LI E L++S V++ +E ++ +
Sbjct: 230 ENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKK 289
Query: 75 PNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISCE-F-AHNNSWYITFEND 126
++ I P S P + L CP F+ + F +H + + + ND
Sbjct: 290 IEPEKW-PIPGPPPRSVPPTDFSQLID---CPEFVPGQAFCSHTGNIFSSRAND 339
>MGI|MGI:1890165 [details] [associations]
symbol:Larp1 "La ribonucleoprotein domain family, member 1"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISA] [GO:0016239 "positive regulation of
macroautophagy" evidence=ISO] MGI:MGI:1890165 GO:GO:0005737
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723 GO:GO:0016239
EMBL:AL672182 InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193
Pfam:PF05383 SMART:SM00715 OrthoDB:EOG4PZJ64 InterPro:IPR006607
SMART:SM00684 HOGENOM:HOG000113283 HOVERGEN:HBG054322 OMA:GSEPATY
EMBL:BC053449 EMBL:AK129202 IPI:IPI00929761 IPI:IPI00929786
UniGene:Mm.248843 ProteinModelPortal:Q6ZQ58 SMR:Q6ZQ58
STRING:Q6ZQ58 PhosphoSite:Q6ZQ58 PaxDb:Q6ZQ58 PRIDE:Q6ZQ58
Ensembl:ENSMUST00000071487 UCSC:uc007jah.2
GeneTree:ENSGT00390000000523 InParanoid:Q6ZQ58 Bgee:Q6ZQ58
CleanEx:MM_LARP1 Genevestigator:Q6ZQ58
GermOnline:ENSMUSG00000037331 Uniprot:Q6ZQ58
Length = 1072
Score = 115 (45.5 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 15 ENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKVR 74
+NL D +L +MD D ++PI +A+F++V+ LT DI LI L++S V++ EE ++ R
Sbjct: 393 DNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEMVEEKVRRR 452
Score = 36 (17.7 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 6/9 (66%), Positives = 8/9 (88%)
Query: 127 EDAQKAYRY 135
EDA++ YRY
Sbjct: 918 EDAKEGYRY 926
>UNIPROTKB|E1BVY8 [details] [associations]
symbol:LOC420093 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006396 "RNA processing" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
InterPro:IPR002344 PRINTS:PR00302 GO:GO:0005634 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 GO:GO:0006396 GO:GO:0030529
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
GeneTree:ENSGT00510000048191 EMBL:AADN02072211 IPI:IPI00821190
Ensembl:ENSGALT00000041247 Uniprot:E1BVY8
Length = 173
Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 26/62 (41%), Positives = 40/62 (64%)
Query: 15 ENLANDAYLLSQMDNDQ--YVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIK 72
ENLA DA+LL + ++ +V I + +F +VK LT+D +L LR S ++V++EG K
Sbjct: 92 ENLAKDAFLLKHVQKNKLGFVSIKLLTSFKKVKYLTRDWRLTLYALRFSKLLEVNQEGTK 151
Query: 73 VR 74
VR
Sbjct: 152 VR 153
>UNIPROTKB|E1BQG3 [details] [associations]
symbol:LARP7 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0006396 "RNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR000504 InterPro:IPR002344
InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 InterPro:IPR014886
Pfam:PF08777 GeneTree:ENSGT00530000063464 OMA:NNPPEDA
EMBL:AADN02009328 IPI:IPI00680045 Ensembl:ENSGALT00000019679
ArrayExpress:E1BQG3 Uniprot:E1BQG3
Length = 602
Score = 120 (47.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 46/149 (30%), Positives = 70/149 (46%)
Query: 16 NLANDAYLLSQMDN--DQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKV 73
NL D +L Q++ D YV I + +FN++KKLT D KLI ++ S V++D EG ++
Sbjct: 52 NLHKDRFLREQIEKSRDGYVDISLLVSFNKMKKLTTDGKLIARAVKSSSVVELDLEGTRI 111
Query: 74 R---PNHKRC------IVILREIPDSTPLEEIRGLFSGK-------SCPRFISCEFAHNN 117
R P +R V + +P + I +F GK S PR+ S
Sbjct: 112 RRRRPLGERPKDVDSRTVYVELLPKNVNHSWIERVF-GKCGNVVYVSIPRYKSTGDPKGF 170
Query: 118 SWYITFENDEDAQKAYRYLREDVREFQNK 146
+ ++ FE E A+KA +L E K
Sbjct: 171 A-FVEFETKEQAEKAIEFLNNPPEEAPRK 198
>UNIPROTKB|G3XAJ5 [details] [associations]
symbol:LARP1B "La-related protein 1B" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0030529 "ribonucleoprotein complex" evidence=IEA]
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 EMBL:CH471056
GO:GO:0030529 InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383
SMART:SM00715 EMBL:AC096898 EMBL:AC099340 EMBL:AC108045
EMBL:AC114735 EMBL:AC124030 RefSeq:NP_835144.1 UniGene:Hs.657067
GeneID:55132 KEGG:hsa:55132 CTD:55132 HGNC:HGNC:24704
ChiTaRS:LARP1B GenomeRNAi:55132 NextBio:58806
ProteinModelPortal:G3XAJ5 SMR:G3XAJ5 PRIDE:G3XAJ5
Ensembl:ENST00000427266 ArrayExpress:G3XAJ5 Bgee:G3XAJ5
Uniprot:G3XAJ5
Length = 522
Score = 117 (46.2 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 29/95 (30%), Positives = 50/95 (52%)
Query: 15 ENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKVR 74
ENL D +L +MD ++PI +A F +V+ LT ++ LI E L++S V++ +E ++ +
Sbjct: 230 ENLERDFFLRGKMDEQGFLPISLIAGFQRVQALTTNLNLILEALKDSTEVEIVDEKMRKK 289
Query: 75 PNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFI 109
++ I P S P + L CP F+
Sbjct: 290 IEPEKW-PIPGPPPRSVPPTDFSQLID---CPEFV 320
>FB|FBgn0260771 [details] [associations]
symbol:Larp7 "La related protein 7" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IEA] [GO:0006396 "RNA
processing" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0097322 "7SK snRNA binding" evidence=IDA] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
EMBL:AE014298 Gene3D:3.30.70.330 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715 KO:K15191
InterPro:IPR014886 Pfam:PF08777 GeneTree:ENSGT00530000063464
GO:GO:0097322 EMBL:AY061107 RefSeq:NP_524795.2 UniGene:Dm.31047
SMR:Q9W362 IntAct:Q9W362 STRING:Q9W362 EnsemblMetazoa:FBtr0301275
GeneID:44900 KEGG:dme:Dmel_CG42569 UCSC:CG12058-RA
FlyBase:FBgn0260771 InParanoid:Q9W362 OMA:PGLIVEC OrthoDB:EOG4CVDQ5
GenomeRNAi:44900 NextBio:837804 Uniprot:Q9W362
Length = 595
Score = 116 (45.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 25/76 (32%), Positives = 44/76 (57%)
Query: 16 NLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKVRP 75
NL+ D +L ++ D YVP+ FN++K LT+D++ I + L S +++DE +KV+
Sbjct: 75 NLSKDRFLRRYVEQDPYVPLEIFLTFNKIKTLTQDVQQIAKALSNSQLLELDETELKVKR 134
Query: 76 NHKRCIVILREIPDST 91
K + R++ D T
Sbjct: 135 RTK--LPDQRDVNDKT 148
>UNIPROTKB|F1P339 [details] [associations]
symbol:LARP1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0016239 "positive regulation of macroautophagy"
evidence=IEA] Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016239
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
InterPro:IPR006607 SMART:SM00684 OMA:GSEPATY
GeneTree:ENSGT00390000000523 EMBL:AADN02028672 IPI:IPI00590067
Ensembl:ENSGALT00000006374 Uniprot:F1P339
Length = 927
Score = 118 (46.6 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 27/95 (28%), Positives = 56/95 (58%)
Query: 15 ENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKVR 74
+NL D +L +MD+D ++PI +A+F++V+ LT DI LI + L++S V++ ++ I+ +
Sbjct: 257 DNLERDFFLRRKMDSDGFLPITLIASFHRVQALTTDISLIIKALKDSKVVEIVDQKIRRK 316
Query: 75 PNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFI 109
++ + + D T + + + +CP F+
Sbjct: 317 EQPEKWALPGPPMADYTQTDFSQFI----NCPEFV 347
>WB|WBGene00020097 [details] [associations]
symbol:larp-1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0034046 "poly(G) RNA binding" evidence=IDA]
[GO:0008266 "poly(U) RNA binding" evidence=IDA] GO:GO:0009792
GO:GO:0002009 GO:GO:0040007 GO:GO:0040010 GO:GO:0008266
GO:GO:0002119 GO:GO:0010171 GO:GO:0040018 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0040035 GO:GO:0000932 GO:GO:0034046
InterPro:IPR006630 PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
InterPro:IPR006607 SMART:SM00684 GeneTree:ENSGT00390000000523
EMBL:FO080694 ProteinModelPortal:D5MCN2 SMR:D5MCN2 PRIDE:D5MCN2
EnsemblMetazoa:R144.7b KEGG:cel:CELE_R144.7 CTD:175680
WormBase:R144.7b OMA:CAEMNTL ArrayExpress:D5MCN2 Uniprot:D5MCN2
Length = 1150
Score = 119 (46.9 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 15 ENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKVR 74
ENL D +L +M + Y+P+ +A+F +V+ LT+D LI E L++S V + +G+++R
Sbjct: 594 ENLQKDFFLRRKMGPEGYLPVALIASFPRVRSLTEDYSLILEALKDSTKVDMSPDGLQIR 653
>POMBASE|SPAC57A10.10c [details] [associations]
symbol:sla1 "La protein homolog" species:4896
"Schizosaccharomyces pombe" [GO:0003723 "RNA binding" evidence=ISM]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006386 "termination of RNA
polymerase III transcription" evidence=TAS] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0034307 "regulation
of ascospore formation" evidence=IMP] [GO:0034414 "tRNA 3'-trailer
cleavage, endonucleolytic" evidence=IMP] [GO:0042779 "tRNA
3'-trailer cleavage" evidence=IGI] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 PomBase:SPAC57A10.10c GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0030529 GO:GO:0031137 InterPro:IPR006630
PROSITE:PS50961 EMBL:AF022949 EMBL:AB011371 PIR:T38937 PIR:T43542
RefSeq:NP_593315.1 ProteinModelPortal:P87058 STRING:P87058
PRIDE:P87058 EnsemblFungi:SPAC57A10.10c.1 GeneID:2541530
KEGG:spo:SPAC57A10.10c eggNOG:COG5193 HOGENOM:HOG000113277
KO:K11090 OMA:FFEENAG OrthoDB:EOG43JGF6 NextBio:20802627
GO:GO:0034307 GO:GO:0006386 GO:GO:0034414 Pfam:PF05383
SMART:SM00715 Uniprot:P87058
Length = 298
Score = 110 (43.8 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 16 NLANDAYL-LSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNV-QVDEEGIKV 73
NL +D +L + ND +VPI T+ANF ++++ + ++ I LR+SP + +VDE G KV
Sbjct: 79 NLPHDKFLWTTSQKNDGWVPIQTIANFKRMRRF-QPLEAIVNALRKSPELLEVDEAGEKV 137
Query: 74 R 74
R
Sbjct: 138 R 138
>UNIPROTKB|Q6PKG0 [details] [associations]
symbol:LARP1 "La-related protein 1" species:9606 "Homo
sapiens" [GO:0003723 "RNA binding" evidence=IEA] [GO:0016239
"positive regulation of macroautophagy" evidence=IMP]
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003723 GO:GO:0016239
InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193 Pfam:PF05383
SMART:SM00715 InterPro:IPR006607 SMART:SM00684 EMBL:BC001460
EMBL:BC033856 EMBL:AK091465 EMBL:AB018274 EMBL:AL133034
IPI:IPI00185919 IPI:IPI00411690 PIR:T42646 RefSeq:NP_056130.2
UniGene:Hs.292078 ProteinModelPortal:Q6PKG0 SMR:Q6PKG0
IntAct:Q6PKG0 MINT:MINT-1631511 STRING:Q6PKG0 PhosphoSite:Q6PKG0
DMDM:73621135 PaxDb:Q6PKG0 PRIDE:Q6PKG0 DNASU:23367
Ensembl:ENST00000336314 Ensembl:ENST00000518297 GeneID:23367
KEGG:hsa:23367 UCSC:uc003lvo.3 UCSC:uc010jie.1 CTD:23367
GeneCards:GC05P154092 HGNC:HGNC:29531 HPA:CAB015222 MIM:612059
neXtProt:NX_Q6PKG0 PharmGKB:PA142671564 HOGENOM:HOG000113283
HOVERGEN:HBG054322 InParanoid:Q6PKG0 OMA:GSEPATY ChiTaRS:LARP1
GenomeRNAi:23367 NextBio:45430 PMAP-CutDB:Q6PKG0 Bgee:Q6PKG0
CleanEx:HS_LARP1 Genevestigator:Q6PKG0 GermOnline:ENSG00000155506
Uniprot:Q6PKG0
Length = 1096
Score = 117 (46.2 bits), Expect = 8.3e-06, P = 8.3e-06
Identities = 39/132 (29%), Positives = 64/132 (48%)
Query: 15 ENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKVR 74
+NL D +L +MD D ++PI +A+F++V+ LT DI LI L++S V++ +E KVR
Sbjct: 418 DNLERDFFLRRKMDADGFLPITLIASFHRVQALTTDISLIFAALKDSKVVEIVDE--KVR 475
Query: 75 PNHKRCIVILREIPDSTPLEEIRGLFSGKSCPRFISC-EFAHNNSWYITFENDEDAQKAY 133
RE P+ PL I +S + ++C EF + E+ + +A
Sbjct: 476 R---------REEPEKWPLPPIVD-YSQTDFSQLLNCPEFVPRQHYQKETESAPGSPRAV 525
Query: 134 RYLREDVREFQN 145
+ E N
Sbjct: 526 TPVPTKTEEVSN 537
>FB|FBgn0261618 [details] [associations]
symbol:larp "La related protein" species:7227 "Drosophila
melanogaster" [GO:0005737 "cytoplasm" evidence=IDA] [GO:0035071
"salivary gland cell autophagic cell death" evidence=IEP]
[GO:0048102 "autophagic cell death" evidence=IEP] [GO:0003674
"molecular_function" evidence=ND] [GO:0005829 "cytosol"
evidence=IDA] [GO:0051225 "spindle assembly" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0051299 "centrosome separation" evidence=IMP] [GO:0007053
"spindle assembly involved in male meiosis" evidence=IMP]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0007140 "male
meiosis" evidence=IMP] [GO:0000001 "mitochondrion inheritance"
evidence=IMP] [GO:0035186 "syncytial blastoderm mitotic cell cycle"
evidence=IMP] EMBL:AE014297 GO:GO:0005829 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 GO:GO:0000001 GO:GO:0035071
GO:GO:0035186 InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193
Pfam:PF05383 SMART:SM00715 InterPro:IPR006607 SMART:SM00684
ChiTaRS:LARP1 GeneTree:ENSGT00390000000523 EMBL:AF221108
EMBL:AY113653 EMBL:AY118468 EMBL:BT100187 RefSeq:NP_001163757.1
RefSeq:NP_001247347.1 RefSeq:NP_001247348.1 RefSeq:NP_524998.1
RefSeq:NP_733244.5 RefSeq:NP_733245.1 IntAct:Q9VAW5 STRING:Q9VAW5
PaxDb:Q9VAW5 PRIDE:Q9VAW5 EnsemblMetazoa:FBtr0301180
EnsemblMetazoa:FBtr0306389 EnsemblMetazoa:FBtr0306390 GeneID:53567
KEGG:dme:Dmel_CG42551 CTD:53567 FlyBase:FBgn0261618
InParanoid:Q9VAW5 OMA:EPEINEM PhylomeDB:Q9VAW5 GenomeRNAi:53567
NextBio:841422 Bgee:Q9VAW5 GermOnline:CG14066 GO:GO:0007053
Uniprot:Q9VAW5
Length = 1673
Score = 117 (46.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 15 ENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKVR 74
+NL D +L +MD + Y+P+ +A+F++V LT D+ +I ++ES +++ E G KVR
Sbjct: 744 DNLTGDFFLRRKMDPEGYIPVTLIASFHRVLALTTDVAVIVNAIKESDKLELFE-GYKVR 802
Query: 75 PNHKRCIVILREIPD 89
+ E+P+
Sbjct: 803 TKTTPTTWPITEVPE 817
>UNIPROTKB|Q5ZKS1 [details] [associations]
symbol:SSB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006396 "RNA processing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR002344 PRINTS:PR00302 GO:GO:0005634 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003723 GO:GO:0006396 GO:GO:0030529
InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193 Pfam:PF05383
SMART:SM00715 GeneTree:ENSGT00530000063464 HOGENOM:HOG000006947
OrthoDB:EOG4C2HB3 EMBL:AADN02020271 EMBL:AJ720013 IPI:IPI00599030
UniGene:Gga.42753 UniGene:Gga.53297 SMR:Q5ZKS1 STRING:Q5ZKS1
Ensembl:ENSGALT00000015751 HOVERGEN:HBG059895 InParanoid:Q5ZKS1
Uniprot:Q5ZKS1
Length = 137
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 16 NLANDAYLLSQMD-NDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPN--VQVDEEGIK 72
NL D +L Q+ +D +VP+ + FN++ +L+KD +I E LR+S ++++E+ K
Sbjct: 29 NLPRDKFLKEQIKLDDGWVPLEVMIKFNRLSRLSKDFGVIVEALRKSKTGLMEINEDKTK 88
Query: 73 VR--PN 76
+R PN
Sbjct: 89 IRRSPN 94
>TAIR|locus:2156912 [details] [associations]
symbol:LARP1b "AT5G66100" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] [GO:0010150 "leaf senescence"
evidence=IMP] EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0010150
InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193 Pfam:PF05383
SMART:SM00715 EMBL:AY091765 EMBL:AY149955 IPI:IPI00523817
RefSeq:NP_201411.2 UniGene:At.9216 ProteinModelPortal:Q8RWR2
SMR:Q8RWR2 PaxDb:Q8RWR2 PRIDE:Q8RWR2 EnsemblPlants:AT5G66100.1
GeneID:836742 KEGG:ath:AT5G66100 TAIR:At5g66100
HOGENOM:HOG000149120 InParanoid:Q8RWR2 OMA:DQMNDEG PhylomeDB:Q8RWR2
ProtClustDB:CLSN2915016 Genevestigator:Q8RWR2 Uniprot:Q8RWR2
Length = 453
Score = 108 (43.1 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 15 ENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPNVQVDEEGIKVR 74
+NL+ D +L QM+++ +VP+ +A F ++ +LT +I+ I E LR S V++ E ++ R
Sbjct: 350 DNLSRDEHLRDQMNDEGWVPVRVIAAFRRLAELTNNIQTILEALRSSEVVEIQGETLRRR 409
Query: 75 PNHKRCIVILREIPDSTP 92
+ + + + RE S P
Sbjct: 410 GDWDKYL-LPREPSRSGP 426
>UNIPROTKB|F1P301 [details] [associations]
symbol:SSB "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0030529
"ribonucleoprotein complex" evidence=IEA] InterPro:IPR000504
InterPro:IPR002344 InterPro:IPR012677 Pfam:PF00076 PRINTS:PR00302
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0003723 GO:GO:0006396 GO:GO:0030529 InterPro:IPR006630
PROSITE:PS50961 Pfam:PF05383 SMART:SM00715
GeneTree:ENSGT00530000063464 EMBL:AADN02020271 IPI:IPI01017187
Ensembl:ENSGALT00000038515 ArrayExpress:F1P301 Uniprot:F1P301
Length = 205
Score = 100 (40.3 bits), Expect = 0.00050, P = 0.00050
Identities = 23/66 (34%), Positives = 41/66 (62%)
Query: 16 NLANDAYLLSQMD-NDQYVPIWTVANFNQVKKLTKDIKLITEVLRESPN--VQVDEEGIK 72
NL D +L Q+ +D +VP+ + FN++ +L+KD +I E LR+S ++++E+ K
Sbjct: 29 NLPRDKFLKEQIKLDDGWVPLEVMIKFNRLSRLSKDFGVIVEALRKSKTGLMEINEDKTK 88
Query: 73 VR--PN 76
+R PN
Sbjct: 89 IRRSPN 94
>ASPGD|ASPL0000062948 [details] [associations]
symbol:AN1288 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] EMBL:BN001308 Gene3D:1.10.10.10 InterPro:IPR011991
EMBL:AACD01000017 InterPro:IPR006630 PROSITE:PS50961 eggNOG:COG5193
Pfam:PF05383 SMART:SM00715 OrthoDB:EOG46MFST RefSeq:XP_658892.1
EnsemblFungi:CADANIAT00001332 GeneID:2877068 KEGG:ani:AN1288.2
HOGENOM:HOG000208218 OMA:TFSYAQA Uniprot:Q5BDU2
Length = 734
Score = 105 (42.0 bits), Expect = 0.00059, P = 0.00059
Identities = 22/67 (32%), Positives = 39/67 (58%)
Query: 15 ENLANDAYLLSQMDNDQYVPIWTVANFNQVKKLTKDIKLITEVLRE--SPNVQVDEEGI- 71
+NL D YL MD+ +V + +ANF +VK+L++D +L+ R+ + E+GI
Sbjct: 587 DNLCKDIYLRKHMDSQGFVALNVIANFKRVKQLSEDFELLRHASRQLKAAEYHAGEDGID 646
Query: 72 KVRPNHK 78
++RP +
Sbjct: 647 RLRPRER 653
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.411 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 149 149 0.00078 104 3 11 22 0.46 31
30 0.39 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 56
No. of states in DFA: 596 (63 KB)
Total size of DFA: 159 KB (2095 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.55u 0.10s 17.65t Elapsed: 00:00:07
Total cpu time: 17.56u 0.10s 17.66t Elapsed: 00:00:07
Start: Thu Aug 15 12:51:01 2013 End: Thu Aug 15 12:51:08 2013