BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16302
(273 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9Y548|YIPF1_HUMAN Protein YIPF1 OS=Homo sapiens GN=YIPF1 PE=2 SV=1
Length = 306
Score = 202 bits (514), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/223 (45%), Positives = 146/223 (65%), Gaps = 7/223 (3%)
Query: 38 NSQKQDAFPGDDSSKPSQWSFEYFQRFFDVDTDTVISRIKGSVYPKFGDNYLQTYIQSKP 97
+S K + G S P W+FEY+Q FFDVDT V RIKGS+ P G N+++ YI+S P
Sbjct: 60 DSDKTELLAGQKKSSPF-WTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNP 118
Query: 98 DLYGPFWVCVTLIITIAISGNIANYLQAAATHKYHWKYDFHAISTSATAIFSYAWLLPVL 157
DLYGPFW+C TL+ IAISGN++N+L YH+ +F +S +AT I++YAWL+P+
Sbjct: 119 DLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFRKVSIAATIIYAYAWLVPLA 178
Query: 158 VWGYLKYQNDS--EVVNLSILELLCVYGYSLSIYIPIAILWVIQVGFLQVTLVLIGALLS 215
+WG+L ++N +V+ S LE++CVYGYSL IYIP AILW+I ++ LV+I +S
Sbjct: 179 LWGFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGIS 238
Query: 216 GYILITSLLPAFRQPN----ILPLVVLGGLHFLLALGLMLYFF 254
G +L + PA R+ N + +V + LH LL++G + YFF
Sbjct: 239 GSLLAMTFWPAVREDNRRVALATIVTIVLLHMLLSVGCLAYFF 281
>sp|Q91VU1|YIPF1_MOUSE Protein YIPF1 OS=Mus musculus GN=Yipf1 PE=2 SV=1
Length = 306
Score = 201 bits (512), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 147/223 (65%), Gaps = 7/223 (3%)
Query: 38 NSQKQDAFPGDDSSKPSQWSFEYFQRFFDVDTDTVISRIKGSVYPKFGDNYLQTYIQSKP 97
+S + + G S P W+FEY+Q FFDVDT V RIKGS+ P G N+++ YI+S P
Sbjct: 60 DSDETELLAGQKRSSPF-WTFEYYQTFFDVDTYQVFDRIKGSLLPVPGKNFVRLYIRSNP 118
Query: 98 DLYGPFWVCVTLIITIAISGNIANYLQAAATHKYHWKYDFHAISTSATAIFSYAWLLPVL 157
DLYGPFW+C TL+ IAISGN++N+L YH+ +F +S +AT I++YAWL+P+
Sbjct: 119 DLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFQKVSIAATVIYAYAWLVPLA 178
Query: 158 VWGYLKYQNDS--EVVNLSILELLCVYGYSLSIYIPIAILWVIQVGFLQVTLVLIGALLS 215
+WG+L ++N +V+ S LE++CVYGYSL IYIP A+LW+I ++ LV+I +S
Sbjct: 179 LWGFLLWRNSKVMSMVSYSFLEIVCVYGYSLFIYIPTAVLWIIPQRVVRWVLVMIALGVS 238
Query: 216 GYILITSLLPAFRQPN----ILPLVVLGGLHFLLALGLMLYFF 254
G +L+ + PA R+ N + +V + LH LL++G + YFF
Sbjct: 239 GSVLVMTFWPAVREDNRRVALATIVTIVLLHVLLSVGCLAYFF 281
>sp|Q5RBL0|YIPF1_PONAB Protein YIPF1 OS=Pongo abelii GN=YIPF1 PE=2 SV=1
Length = 306
Score = 201 bits (510), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 101/223 (45%), Positives = 145/223 (65%), Gaps = 7/223 (3%)
Query: 38 NSQKQDAFPGDDSSKPSQWSFEYFQRFFDVDTDTVISRIKGSVYPKFGDNYLQTYIQSKP 97
+S K + G S P W+FEY+Q FFDVDT V RIKGS+ P G N+++ YI+S P
Sbjct: 60 DSDKTELLAGQKKSSPF-WTFEYYQTFFDVDTYQVFDRIKGSLLPIPGKNFVRLYIRSNP 118
Query: 98 DLYGPFWVCVTLIITIAISGNIANYLQAAATHKYHWKYDFHAISTSATAIFSYAWLLPVL 157
DLYGPFW+C TL+ IAISGN++N+L Y + +F +S +AT I++YAWL+P+
Sbjct: 119 DLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYRYVPEFRKVSIAATTIYAYAWLVPLA 178
Query: 158 VWGYLKYQNDS--EVVNLSILELLCVYGYSLSIYIPIAILWVIQVGFLQVTLVLIGALLS 215
+WG+L ++N +V+ S LE++CVYGYSL IYIP AILW+I ++ LV+I +S
Sbjct: 179 LWGFLMWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAILWIIPQKAVRWILVMIALGIS 238
Query: 216 GYILITSLLPAFRQPN----ILPLVVLGGLHFLLALGLMLYFF 254
G +L + PA R+ N + +V + LH LL++G + YFF
Sbjct: 239 GSVLAMTFWPAVREDNRRVALATIVTIVLLHMLLSVGCLAYFF 281
>sp|Q6P6G5|YIPF1_RAT Protein YIPF1 OS=Rattus norvegicus GN=Yipf1 PE=2 SV=1
Length = 306
Score = 200 bits (508), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 145/223 (65%), Gaps = 7/223 (3%)
Query: 38 NSQKQDAFPGDDSSKPSQWSFEYFQRFFDVDTDTVISRIKGSVYPKFGDNYLQTYIQSKP 97
+S + + G S P W+FEY+Q FFDVDT V RIKGS+ P G N+++ YI+S P
Sbjct: 60 DSDETELLAGQKKSSPF-WTFEYYQTFFDVDTYQVFDRIKGSLLPVPGKNFVRLYIRSNP 118
Query: 98 DLYGPFWVCVTLIITIAISGNIANYLQAAATHKYHWKYDFHAISTSATAIFSYAWLLPVL 157
DLYGPFW+C TL+ IAISGN++N+L YH+ +F +S +AT I++YAWL+P+
Sbjct: 119 DLYGPFWICATLVFAIAISGNLSNFLIHLGEKTYHYVPEFQKVSIAATVIYAYAWLVPLA 178
Query: 158 VWGYLKYQNDS--EVVNLSILELLCVYGYSLSIYIPIAILWVIQVGFLQVTLVLIGALLS 215
+WG+L ++N +V+ S LE++CVYGYSL IYIP A+LW+I ++ LV I +S
Sbjct: 179 LWGFLLWRNSKVMNIVSYSFLEIVCVYGYSLFIYIPTAVLWIIPQRVIRWVLVTIALGIS 238
Query: 216 GYILITSLLPAFRQPN----ILPLVVLGGLHFLLALGLMLYFF 254
G +L + PA R+ N + +V + LH LL++G + YFF
Sbjct: 239 GSVLAMTFWPAVREDNRRVALATIVTIMLLHVLLSVGCLAYFF 281
>sp|Q99LP8|YIPF2_MOUSE Protein YIPF2 OS=Mus musculus GN=Yipf2 PE=2 SV=1
Length = 312
Score = 162 bits (411), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 131/214 (61%), Gaps = 6/214 (2%)
Query: 48 DDSSKPSQWSFEYFQRFFDVDTDTVISRIKGSVYPKFGDNYLQTYIQSKPDLYGPFWVCV 107
++ +P W+F+Y+Q FFDVDT V+ RIKGS+ P G N+++ +++++PDLYGPFW+C
Sbjct: 67 EEKPQPRFWTFDYYQSFFDVDTSQVLDRIKGSLLPHPGHNFVRHHLRNRPDLYGPFWICA 126
Query: 108 TLIITIAISGNIANYLQAAATHKYHWKYDFHAISTSATAIFSYAWLLPVLVWGYLKY-QN 166
TL +A++GN+ L H+ FH ++ + I+ YAWL+P+ +WG+L++ Q
Sbjct: 127 TLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTIAGITIYCYAWLVPLALWGFLRWRQG 186
Query: 167 DSEVVNL-SILELLCVYGYSLSIYIPIAILWVIQVGFLQVTLVLIGALLSGYILITSLLP 225
E + L + LE +CVYGYSL ++IP +LW+I V ++Q +G LS L+ +L P
Sbjct: 187 TRERMGLYTFLETVCVYGYSLFVFIPTVVLWLIPVQWIQWLFGALGLALSAAGLVFTLWP 246
Query: 226 AFRQPNILPLVVL----GGLHFLLALGLMLYFFH 255
R+ L L LH LLALG LYFF
Sbjct: 247 VVREDTRLVAAALLSTVVLLHALLALGCKLYFFQ 280
>sp|Q5XIT3|YIPF2_RAT Protein YIPF2 OS=Rattus norvegicus GN=Yipf2 PE=2 SV=1
Length = 311
Score = 157 bits (398), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/214 (40%), Positives = 130/214 (60%), Gaps = 6/214 (2%)
Query: 48 DDSSKPSQWSFEYFQRFFDVDTDTVISRIKGSVYPKFGDNYLQTYIQSKPDLYGPFWVCV 107
D+ +P W+F+Y+Q FFDVDT V+ RIKGS+ P G N+++ +++++PDLYGPFW+C
Sbjct: 66 DEKPQPRFWTFDYYQSFFDVDTSQVLDRIKGSLLPHPGHNFVRHHLRNRPDLYGPFWICA 125
Query: 108 TLIITIAISGNIANYLQAAATHKYHWKYDFHAISTSATAIFSYAWLLPVLVWGYLKY-QN 166
TL +A++GN+ L H+ FH ++ + I+ YAWL+P+ +WG+L++ Q
Sbjct: 126 TLAFVLAVTGNLTLVLAQRRDPSIHYSPQFHKVTIAGITIYCYAWLVPLALWGFLRWRQG 185
Query: 167 DSEVVNL-SILELLCVYGYSLSIYIPIAILWVIQVGFLQVTLVLIGALLSGYILITSLLP 225
E + L + LE +CVYGYSL ++IP +LW+I V +LQ + LS L+ +L P
Sbjct: 186 TRERMGLYTFLETVCVYGYSLFVFIPTVVLWLIPVQWLQWLFGALALALSAAGLVFTLWP 245
Query: 226 AFRQPNILPLVVLGGL----HFLLALGLMLYFFH 255
R+ L L + H LLALG LYFF
Sbjct: 246 VVREDTRLVAAALLSIVVLLHALLALGCKLYFFQ 279
>sp|Q9BWQ6|YIPF2_HUMAN Protein YIPF2 OS=Homo sapiens GN=YIPF2 PE=2 SV=1
Length = 316
Score = 157 bits (398), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 114/179 (63%), Gaps = 2/179 (1%)
Query: 53 PSQWSFEYFQRFFDVDTDTVISRIKGSVYPKFGDNYLQTYIQSKPDLYGPFWVCVTLIIT 112
P W+F Y+Q FFDVDT V+ RIKGS+ P+ G N+++ +++++PDLYGPFW+C TL
Sbjct: 75 PGFWTFSYYQSFFDVDTSQVLDRIKGSLLPRPGHNFVRHHLRNRPDLYGPFWICATLAFV 134
Query: 113 IAISGNIANYLQAAATHKYHWKYDFHAISTSATAIFSYAWLLPVLVWGYLKYQN--DSEV 170
+A++GN+ L H+ FH ++ + +I+ YAWL+P+ +WG+L+++ +
Sbjct: 135 LAVTGNLTLVLAQRRDPSIHYSPQFHKVTVAGISIYCYAWLVPLALWGFLRWRKGVQERM 194
Query: 171 VNLSILELLCVYGYSLSIYIPIAILWVIQVGFLQVTLVLIGALLSGYILITSLLPAFRQ 229
+ LE +C+YGYSL ++IP+ +LW+I V +LQ + LS L+ +L P R+
Sbjct: 195 GPYTFLETVCIYGYSLFVFIPMVVLWLIPVPWLQWLFGALALGLSAAGLVFTLWPVVRE 253
>sp|Q54TS4|YIPF1_DICDI Protein YIPF1 homolog OS=Dictyostelium discoideum GN=yipf1 PE=3
SV=1
Length = 347
Score = 129 bits (324), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 132/233 (56%), Gaps = 19/233 (8%)
Query: 38 NSQKQDAFP--GDDSSKPSQWSF---EYFQRFFDVDTDTVISRIKGSVYP-KFGDNYLQT 91
N++ D P ++ ++SF Y++ F+VDT V R+ S+ P KF
Sbjct: 103 NNKFSDNVPLNTNEDGTEKKYSFYEVPYYRFLFNVDTKEVGLRLIRSMLPIKFS---FFN 159
Query: 92 YIQSKPDLYGPFWVCVTLIITIAISGNIANYLQAAATHKYHWKYDFHAISTSATAIFSYA 151
I+ PDLYGPFWV +L+ +A++ N+ Y ++ HK W+ D I SA I+ Y+
Sbjct: 160 LIRENPDLYGPFWVLTSLVFIVAVTSNLNEYFHSS-DHK-SWEVDIQKIVYSAITIYGYS 217
Query: 152 WLLPVLVWGYLKYQNDSEVVNLSILELLCVYGYSLSIYIPIAILWVIQVGFLQVTLVLIG 211
+++P+++WG K+ N + L +L++LC+YGY+L I++P +IL VI + +Q +V I
Sbjct: 218 FVIPLILWGIFKWMN----LGLRLLDMLCIYGYTLFIFVPASILCVIPLQLVQWIIVAIA 273
Query: 212 ALLSGYILITSLLPA----FRQPNILPLVVLGGLHFLLALGLMLYFFHITRRN 260
+++SG L+T++ F + ++ V+G LH LAL L LYFF + N
Sbjct: 274 SIVSGLFLVTNIFTPLKEDFTKRGLIICAVIGALHIGLALVLKLYFFANSTEN 326
>sp|Q9UTD3|YIP5_SCHPO Protein YIP5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=yip5 PE=3 SV=1
Length = 249
Score = 90.1 bits (222), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 128/265 (48%), Gaps = 28/265 (10%)
Query: 1 MSTDILVDFEETNASEFDFKSYPSQLEQNPLGDSPVRNSQKQDAFPGDDSSKPSQWSFEY 60
M+ +I +D E + F++ ++ P+ P Q + A S + + W+
Sbjct: 1 MAHEIEID-SEADLGRTTFEAEDLYKQRTPITKPPAPRLQSRRA-----SMQETPWTI-- 52
Query: 61 FQRFFDVDTDTVISRIKGSVYPKFGDNYLQTYIQSKPDLYGPFWVCVTLIITIAISGNIA 120
+ F+V+T V+ R ++ P N+ + +PDLYGPFW+ T+I + S +I
Sbjct: 53 -KDSFNVETKDVVQRCIHTLIPTV--NFFDV-VDDRPDLYGPFWITTTVIQALFFSNSIT 108
Query: 121 NYLQAAATHKYHWKYDFHAISTSATAIFSYAWLLPVLVWGYLKYQNDSEVVNLSILELLC 180
Y + A H Y + ++A+ I+ Y ++ VL+WG L + N +L+ LC
Sbjct: 109 EYARYATGHGTS-GYSIKKLISAASIIYGYTTIIAVLLWGILVWNK----CNPKLLDCLC 163
Query: 181 VYGYSLSIYIPIA-------ILWVIQVGFLQVTLVLIGALLSGYILITSLLPAFRQP--N 231
+YGY+ +++P++ +L + ++ L IG L+S L +L P +Q N
Sbjct: 164 LYGYANIVWLPVSLATPPFGLLSTLASHIVKYVLTGIGLLISIVFLTRNLYPICQQAGSN 223
Query: 232 ILPLVVLGGL--HFLLALGLMLYFF 254
+ L++ G + H LLAL L L FF
Sbjct: 224 LCKLLLFGIIVFHCLLALSLQLIFF 248
>sp|P53108|YIP5_YEAST Protein YIP5 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=YIP5 PE=1 SV=1
Length = 310
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 102/250 (40%), Gaps = 27/250 (10%)
Query: 20 KSYPSQLEQNPLGDSPVRNSQKQDAFPGDDSSKPSQWSFEYFQRFFDVDTDTVISRIKGS 79
+S P Q + +P V D G + +P Y+ ++F +D R+ S
Sbjct: 59 ESAPLQGQMDPPAYDQVIGQNDNDGL-GRNGLRPGL--INYYSKYFQIDLTQFKKRL--S 113
Query: 80 VYPKFGDNYLQTYIQSKPDLYGPFWVCVTLII---TIAISGN--IANYLQAAAT-HKYHW 133
F +++ + DLYG W+ T+++ T++ N I++ ++ T
Sbjct: 114 AVLTFRNDHNSESNEDNTDLYGAVWITATVVMINFTMSRGLNFIISDVIEGVKTGEDIDR 173
Query: 134 KYDFHAISTSATAIFSYAWLLPVLVWGYLKYQNDSEVVN--LSILELLCVYGYSLSIYIP 191
F + S + Y + +P + L SE S+ EL+ VYGY+ I+IP
Sbjct: 174 ASQFKKLLHSIWLFYGYTFGVPFITMQVLNRDEHSERNRSFKSVPELISVYGYANLIWIP 233
Query: 192 IAILWVI--------QVGFLQVTLVLIGALLSGYIL---ITSLLPAFRQPN---ILPLVV 237
+ ++ I V +Q +V +G S Y L I+S Q N L ++V
Sbjct: 234 VCVILNILDMSKRLRTVQAIQWAIVALGWAQSSYFLNSQISSNNNTETQSNGKFSLSIIV 293
Query: 238 LGGLHFLLAL 247
+ LH L L
Sbjct: 294 VVALHTLFCL 303
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,322,255
Number of Sequences: 539616
Number of extensions: 4161449
Number of successful extensions: 9168
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 9136
Number of HSP's gapped (non-prelim): 26
length of query: 273
length of database: 191,569,459
effective HSP length: 116
effective length of query: 157
effective length of database: 128,974,003
effective search space: 20248918471
effective search space used: 20248918471
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 60 (27.7 bits)