Query psy16306
Match_columns 302
No_of_seqs 292 out of 2487
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 17:59:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16306.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16306hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dtg_A Branched-chain amino ac 100.0 4.6E-36 1.6E-40 283.1 11.3 156 2-158 7-167 (372)
2 2coi_A Branched chain aminotra 100.0 5.6E-35 1.9E-39 276.7 16.0 152 2-156 27-178 (386)
3 3dth_A Branched-chain amino ac 100.0 3E-35 1E-39 276.7 11.5 137 19-156 28-165 (372)
4 3uzo_A Branched-chain-amino-ac 100.0 1.1E-34 3.9E-39 271.9 13.3 138 18-157 23-161 (358)
5 4dqn_A Putative branched-chain 100.0 6.8E-34 2.3E-38 265.7 15.0 138 17-156 7-145 (345)
6 2a1h_A Branched chain aminotra 100.0 1.5E-33 5E-38 265.5 16.0 151 2-156 7-158 (365)
7 3u0g_A Putative branched-chain 99.9 2.9E-27 1E-31 219.4 3.5 115 44-166 30-145 (328)
8 3daa_A D-amino acid aminotrans 99.9 1.6E-26 5.5E-31 209.9 1.6 112 44-167 2-115 (277)
9 1iye_A Branched-chain amino ac 99.9 2.4E-24 8.4E-29 198.4 5.2 115 44-166 8-123 (309)
10 2eiy_A ILVE, branched-chain am 99.9 1E-21 3.6E-26 180.8 10.4 114 44-165 7-121 (308)
11 3lul_A 4-amino-4-deoxychorisma 99.8 2.3E-20 7.8E-25 168.9 10.0 106 44-165 5-111 (272)
12 3sno_A Hypothetical aminotrans 99.8 1.4E-19 4.7E-24 167.0 9.7 95 44-150 16-119 (315)
13 1i2k_A 4-amino-4-deoxychorisma 99.7 3.4E-18 1.1E-22 154.4 9.9 104 45-166 2-105 (269)
14 2xpf_A 4-amino-4-deoxychorisma 99.7 1.3E-17 4.6E-22 152.2 10.3 104 44-166 23-126 (292)
15 2zgi_A Putative 4-amino-4-deox 99.7 3.5E-17 1.2E-21 145.9 7.5 91 45-154 2-95 (246)
16 3dth_A Branched-chain amino ac 99.6 3.7E-18 1.3E-22 160.4 -2.9 174 122-295 52-253 (372)
17 3uzo_A Branched-chain-amino-ac 99.6 8.3E-18 2.8E-22 157.4 -0.6 172 124-295 49-247 (358)
18 4dqn_A Putative branched-chain 99.6 1.1E-17 3.8E-22 156.0 -1.3 172 124-295 34-233 (345)
19 3dtg_A Branched-chain amino ac 99.6 1.5E-16 5.2E-21 149.7 5.2 111 124-234 54-166 (372)
20 3csw_A BCAT, putative branched 99.6 5.7E-16 2E-20 140.9 5.0 87 45-146 17-104 (285)
21 2a1h_A Branched chain aminotra 99.6 6.8E-17 2.3E-21 151.9 -2.4 173 123-295 47-246 (365)
22 2coi_A Branched chain aminotra 99.5 3E-14 1E-18 134.6 6.3 103 199-301 66-169 (386)
23 3u0g_A Putative branched-chain 99.4 1.2E-13 4.1E-18 127.9 5.1 96 199-301 30-127 (328)
24 2eiy_A ILVE, branched-chain am 99.4 1.4E-14 4.9E-19 133.0 -2.1 166 122-295 7-202 (308)
25 3lul_A 4-amino-4-deoxychorisma 99.4 2.5E-14 8.5E-19 129.2 -2.7 159 122-295 5-183 (272)
26 3ceb_A D-aminoacid aminotransf 99.3 9.9E-13 3.4E-17 112.8 4.9 68 67-147 2-73 (194)
27 3daa_A D-amino acid aminotrans 99.3 2.4E-12 8.1E-17 116.5 4.7 89 199-299 2-92 (277)
28 1iye_A Branched-chain amino ac 99.2 1.4E-11 4.7E-16 113.1 5.4 95 199-301 8-104 (309)
29 3sno_A Hypothetical aminotrans 99.1 2.2E-11 7.5E-16 112.1 5.3 90 199-300 16-115 (315)
30 3qqm_A MLR3007 protein; struct 99.1 5.8E-11 2E-15 103.9 7.2 70 66-148 12-81 (221)
31 2zgi_A Putative 4-amino-4-deox 99.1 6.5E-13 2.2E-17 118.1 -6.0 150 123-295 2-168 (246)
32 1i2k_A 4-amino-4-deoxychorisma 99.1 2.5E-12 8.7E-17 115.7 -2.3 155 123-295 2-182 (269)
33 2xpf_A 4-amino-4-deoxychorisma 99.0 4.4E-12 1.5E-16 115.6 -5.0 158 120-295 21-203 (292)
34 3csw_A BCAT, putative branched 98.5 3.2E-08 1.1E-12 89.7 2.8 85 200-299 17-103 (285)
35 3ceb_A D-aminoacid aminotransf 98.3 3E-07 1E-11 78.4 3.2 67 221-300 2-72 (194)
36 3qqm_A MLR3007 protein; struct 98.1 3.7E-06 1.3E-10 73.2 6.2 66 222-300 14-79 (221)
37 2guz_B Mitochondrial import in 30.5 50 0.0017 22.2 3.5 30 99-128 4-37 (65)
No 1
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=4.6e-36 Score=283.06 Aligned_cols=156 Identities=36% Similarity=0.653 Sum_probs=137.4
Q ss_pred CCccEEEecCCCCCCCCCCc----CCCCcccccCCceEEEEEeCCCcceeCCeeccCCCcccCccchhhhcCCeeeeeee
Q psy16306 2 FQEIHVQLCSPEQLQPKPEV----SQLKFGTVFTDHMLQIEFNEQLGGWQAPRVSPLKYLTLHPAAKVLHYSVELFEGMK 77 (302)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~----~~~~f~~~~~~~m~~~~~~~~~~~w~~g~~~~~~~~~i~~~~~~~~yG~~vfEg~r 77 (302)
++.|+++...++..+|++.+ .++|||++|||||++|+|+.+ .+|+||+++|+++++|||.+++||||||||||||
T Consensus 7 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~fg~~~tdhm~~~~~~~~-~gW~ng~ivp~~~~~i~p~~~~lhYG~gvFEgir 85 (372)
T 3dtg_A 7 SGPLEFTVSANTNPATDAVRESILANPGFGKYYTDHMVSIDYTVD-EGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLK 85 (372)
T ss_dssp ---CCCEECCCSSCCCHHHHHHHHHSCCSSSCCCSEEEEEEEETT-TEEEEEEEEESCCEEECTTCTHHHHCCEEECCEE
T ss_pred CcceEEEEeCCCCCCCcchhhhHhhccCCCCCccceeEEEEECCC-CcEeCCEEEEchhceeCcchhhhhccceeeeeEE
Confidence 45566666666654454433 478999999999999999866 7899999999999999999999999999999999
Q ss_pred eeecCCCceeecCcchhHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhccccccCCC-Cceeeecccccccccccccccc
Q psy16306 78 AYRGVDGHIRMFRPEMNMDRMNRSALRAGLPQFDPEEMIQCLNRLIQIDQEWVPHTT-AASLYIRPTLIGTDLFEGMKAY 156 (302)
Q Consensus 78 ~y~~~~g~~~~Fr~~~H~~Rl~~S~~~l~~~~~~~~~l~~~~~~lv~~Ng~~vp~~~-~~s~yirp~~~g~~~~~g~~~~ 156 (302)
+|+++||++.+||+++|++||.+||++|+||.++.+++.+++.+++..|..|||... ..++||||++++++...|+++.
T Consensus 86 aY~~~dG~i~~Fr~~~h~~Rl~~Sa~~l~iP~~~~e~~~~~~~~l~~~~~~~v~~~~~~~~~YiRp~~~~~~~~lgv~p~ 165 (372)
T 3dtg_A 86 AYRWADGSIVSFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPS 165 (372)
T ss_dssp EEECTTSCEEEESHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHGGGSCCSSSSCEEEEEEEEEECCCCCSCSCC
T ss_pred EEECCCCeEEeeCchHHHHHHhhcccccCCCCCCHHHHHHHHHHHHHHhhhhccccCCCCceEEEEEEEeecCccCcCCC
Confidence 999999999999999999999999999999988999999999999999999999864 5899999999999988888876
Q ss_pred cC
Q psy16306 157 RG 158 (302)
Q Consensus 157 ~~ 158 (302)
..
T Consensus 166 ~~ 167 (372)
T 3dtg_A 166 NE 167 (372)
T ss_dssp SE
T ss_pred CC
Confidence 44
No 2
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A*
Probab=100.00 E-value=5.6e-35 Score=276.67 Aligned_cols=152 Identities=53% Similarity=0.974 Sum_probs=139.4
Q ss_pred CCccEEEecCCCCCCCCCCcCCCCcccccCCceEEEEEeCCCcceeCCeeccCCCcccCccchhhhcCCeeeeeeeeeec
Q psy16306 2 FQEIHVQLCSPEQLQPKPEVSQLKFGTVFTDHMLQIEFNEQLGGWQAPRVSPLKYLTLHPAAKVLHYSVELFEGMKAYRG 81 (302)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~m~~~~~~~~~~~w~~g~~~~~~~~~i~~~~~~~~yG~~vfEg~r~y~~ 81 (302)
++++++++.++++.++ +|++|+||++|||||+.++|+++ .+|+||+++|.++++|++.|++||||||||||||+|++
T Consensus 27 ~~~~~~~~~~~~~~~~--~~~~~~fg~~~td~m~~~~~~~~-~~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEg~k~y~g 103 (386)
T 2coi_A 27 AKDLIVTPATILKEKP--DPNNLVFGTVFTDHMLTVEWSSE-FGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRG 103 (386)
T ss_dssp GGGCEECCCSSCCCCC--CCC-CCTTCCCCSEEEEEEEETT-TEECCCEEEECCCEEECTTCHHHHSCCEEECCEEEEEC
T ss_pred cccceeeccCCcccCC--CccccCCccccccceEEEEeCCC-cEEECCEEeecccCccCcccchhhcCceeEEEEEEEeC
Confidence 5688899888877544 46899999999999999999987 78999999999999999999999999999999999999
Q ss_pred CCCceeecCcchhHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhccccccCCCCceeeecccccccccccccccc
Q psy16306 82 VDGHIRMFRPEMNMDRMNRSALRAGLPQFDPEEMIQCLNRLIQIDQEWVPHTTAASLYIRPTLIGTDLFEGMKAY 156 (302)
Q Consensus 82 ~~g~~~~Fr~~~H~~Rl~~S~~~l~~~~~~~~~l~~~~~~lv~~Ng~~vp~~~~~s~yirp~~~g~~~~~g~~~~ 156 (302)
+||++++||+++|++||++||++|+||+++.++|.+++.++|..|+.|+|...+.++||||++++++...|+.+.
T Consensus 104 ~dg~i~~frld~H~~RL~~Sa~~l~~p~~~~e~~~~~i~~lv~~~~~~vp~~~g~~~yiR~~~~~~~~~~g~~p~ 178 (386)
T 2coi_A 104 VDNKIRLFQPNLNMDRMYRSAVRATLPVFDKEELLECIQQLVKLDQEWVPYSTSASLYIRPTFIGTEPSLGVKKP 178 (386)
T ss_dssp TTSCEEEESHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCSSSSCEEEEEEEEEECCCSCSCSCC
T ss_pred CCCceeecCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHhccccCCCCCCccEEEEEEEEecCCccccCCC
Confidence 999999999999999999999999999999999999999999999999997667899999999988777777654
No 3
>3dth_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP OBZ; 1.85A {Mycobacterium smegmatis} PDB: 3dtf_A* 3dtg_A* 3jz6_A* 3ht5_A*
Probab=100.00 E-value=3e-35 Score=276.68 Aligned_cols=137 Identities=41% Similarity=0.753 Sum_probs=129.4
Q ss_pred CCcCCCCcccccCCceEEEEEeCCCcceeCCeeccCCCcccCccchhhhcCCeeeeeeeeeecCCCceeecCcchhHHHH
Q psy16306 19 PEVSQLKFGTVFTDHMLQIEFNEQLGGWQAPRVSPLKYLTLHPAAKVLHYSVELFEGMKAYRGVDGHIRMFRPEMNMDRM 98 (302)
Q Consensus 19 ~~~~~~~f~~~~~~~m~~~~~~~~~~~w~~g~~~~~~~~~i~~~~~~~~yG~~vfEg~r~y~~~~g~~~~Fr~~~H~~Rl 98 (302)
.+|++|+||++|||||++|+|+++ .+|+||+++|.++++||+.|+|||||||||||||+|++++|++++||+++|++||
T Consensus 28 ~~~~~l~fg~~~td~m~~~~~~~~-~~W~~g~i~p~~~~~i~~~d~gl~yGdgvFEglkay~~~dG~i~lFrl~~H~~RL 106 (372)
T 3dth_A 28 SILANPGFGKYYTDHMVSIDYTVD-EGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARL 106 (372)
T ss_dssp HHHHSCCSSSCCCSEEEEEEEETT-TEEEEEEEEESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHH
T ss_pred cchhccCCCCccCCceEEEEEcCC-CeEECCcEeehHhcccCccccHhhcCcEEEEEEEEEECCCCcEeecCHHHHHHHH
Confidence 456899999999999999999986 7999999999999999999999999999999999999999988999999999999
Q ss_pred HHHHHHcCCCCCCHHHHHHHHHHHHhhccccccCC-CCceeeecccccccccccccccc
Q psy16306 99 NRSALRAGLPQFDPEEMIQCLNRLIQIDQEWVPHT-TAASLYIRPTLIGTDLFEGMKAY 156 (302)
Q Consensus 99 ~~S~~~l~~~~~~~~~l~~~~~~lv~~Ng~~vp~~-~~~s~yirp~~~g~~~~~g~~~~ 156 (302)
++||++|+||+++.++|.+++.++|..|+.|||.. .+.++||||++++++...|+++.
T Consensus 107 ~~Sa~~L~mp~~~~e~l~~~i~~lv~~n~~~vp~~~~~~~lYiRp~~~~~~~~~G~~p~ 165 (372)
T 3dth_A 107 QSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPS 165 (372)
T ss_dssp HHHHHHTTCCCCCHHHHHHHHHHHHHHHGGGSCCSSSSCEEEEEEEEEECCCCSSCSCC
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCCcEEEEEEEEcCCCcCCcCCC
Confidence 99999999999999999999999999999999986 67899999999998877777654
No 4
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A*
Probab=100.00 E-value=1.1e-34 Score=271.91 Aligned_cols=138 Identities=30% Similarity=0.539 Sum_probs=129.1
Q ss_pred CCCcCCCCcccccCCceEEEEEeCCCcceeCCeeccCCCcccCccchhhhcCCeeeeeeeeeecCCCceeecCcchhHHH
Q psy16306 18 KPEVSQLKFGTVFTDHMLQIEFNEQLGGWQAPRVSPLKYLTLHPAAKVLHYSVELFEGMKAYRGVDGHIRMFRPEMNMDR 97 (302)
Q Consensus 18 ~~~~~~~~f~~~~~~~m~~~~~~~~~~~w~~g~~~~~~~~~i~~~~~~~~yG~~vfEg~r~y~~~~g~~~~Fr~~~H~~R 97 (302)
.++|++|+||++|||||++|+|+++ .|+||+++|.+++.|++.|+|||||||||||||+|++.+|++++||+++|++|
T Consensus 23 ~~~~~~l~fg~~~td~m~~~~~~~~--~w~ng~i~p~~~~~i~~~d~gl~yGdgvFE~ir~y~~~dG~i~lfrl~~Hl~R 100 (358)
T 3uzo_A 23 DIDWSTLGFSYIRTDLRYLAHWKDG--EWDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPDQNAAR 100 (358)
T ss_dssp -CCGGGCCSCCCCCSCEEEEEEETT--EECCCEEESCCEEEEETTCHHHHSCCEEECCEEEEECTTSCEEECCHHHHHHH
T ss_pred CCCcccCCCCCcccCeeEEEEEeCC--cEECCEEeEcccceeChHHcceecCcEEEEEEEEEECCCCcEeecCHHHHHHH
Confidence 4567999999999999999999986 59999999999999999999999999999999999999998999999999999
Q ss_pred HHHHHHHcCCCCCCHHHHHHHHHHHHhhccccccCC-CCceeeeccccccccccccccccc
Q psy16306 98 MNRSALRAGLPQFDPEEMIQCLNRLIQIDQEWVPHT-TAASLYIRPTLIGTDLFEGMKAYR 157 (302)
Q Consensus 98 l~~S~~~l~~~~~~~~~l~~~~~~lv~~Ng~~vp~~-~~~s~yirp~~~g~~~~~g~~~~~ 157 (302)
|++||++|+||+++.++|.+++.++|..|+.|||.. .+.++||||++++++...|+.+..
T Consensus 101 L~~Sa~~L~ip~~~~e~l~~~i~~lv~~n~~~vp~~~~~~~~yiR~~v~~~~~~~G~~p~~ 161 (358)
T 3uzo_A 101 MRMSCRRLLMPELSDEQFIDACLQVVRANEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAP 161 (358)
T ss_dssp HHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCTTSCCEEEEEEEEEEESSCCSSSCCS
T ss_pred HHHHHHHhCCCCCCHHHHHHHHHHHHHHcCCcCCCCCCCceEEEEEEEEecCCccccCCCC
Confidence 999999999999999999999999999999999975 568999999999998888877643
No 5
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans}
Probab=100.00 E-value=6.8e-34 Score=265.65 Aligned_cols=138 Identities=30% Similarity=0.551 Sum_probs=128.7
Q ss_pred CCCCcCCCCcccccCCceEEEEEeCCCcceeCCeeccCCCcccCccchhhhcCCeeeeeeeeeecCCCceeecCcchhHH
Q psy16306 17 PKPEVSQLKFGTVFTDHMLQIEFNEQLGGWQAPRVSPLKYLTLHPAAKVLHYSVELFEGMKAYRGVDGHIRMFRPEMNMD 96 (302)
Q Consensus 17 ~~~~~~~~~f~~~~~~~m~~~~~~~~~~~w~~g~~~~~~~~~i~~~~~~~~yG~~vfEg~r~y~~~~g~~~~Fr~~~H~~ 96 (302)
+.++|++|+||++|||||++++|+++ .|+||+++|.++++||+.|+|||||||||||||+|++.+|++++|++++|++
T Consensus 7 ~~~~~~~l~fg~~~td~m~~~~~~~~--~w~nG~~vp~~~~~i~~~d~gl~yGdgvFE~ir~~~g~dg~~~~f~l~~Hl~ 84 (345)
T 4dqn_A 7 VDLDWKNLGFEYHKLPFRYISYYKDG--KWDDGKLTEDATLHISESSPALHYGQEAFEGLKAYRTKDGSVQLFRPNMNAE 84 (345)
T ss_dssp CCCCGGGCCSCCCCCSCEEEEEEETT--EECCCEEESCCSCCCCTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHHH
T ss_pred CCCCchhcCCCCcccCceEEEEecCC--cEECCEEeEhhhcccCccccccccccEEEEEEEEEeCCCCcccccCHHHHHH
Confidence 34567999999999999999999996 5999999999999999999999999999999999999989888999999999
Q ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHHHhhccccccCC-CCceeeecccccccccccccccc
Q psy16306 97 RMNRSALRAGLPQFDPEEMIQCLNRLIQIDQEWVPHT-TAASLYIRPTLIGTDLFEGMKAY 156 (302)
Q Consensus 97 Rl~~S~~~l~~~~~~~~~l~~~~~~lv~~Ng~~vp~~-~~~s~yirp~~~g~~~~~g~~~~ 156 (302)
||.+||++|+||+++.++|.+++.++|..|+.|||.. .+.++||||++++++...|+.+.
T Consensus 85 RL~~Sa~~L~i~~~~~~~l~~~i~~lv~~n~~~vp~~~~~~~~yiR~~v~~~~~~~g~~p~ 145 (345)
T 4dqn_A 85 RLQRTADRLLMPQVPTDKFIDAAKQVVRANEEYVPPYGTGATLYLRPLLIGVGDVIGVHPA 145 (345)
T ss_dssp HHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCTTSSCEEEEEEEEEEESCCCSSCCC
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCCCcEEEEEEEEeCCCccCCCCC
Confidence 9999999999999999999999999999999999985 56799999999998877777654
No 6
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A*
Probab=100.00 E-value=1.5e-33 Score=265.52 Aligned_cols=151 Identities=47% Similarity=0.932 Sum_probs=138.2
Q ss_pred CCccEEEecCCCCCCCCCCc-CCCCcccccCCceEEEEEeCCCcceeCCeeccCCCcccCccchhhhcCCeeeeeeeeee
Q psy16306 2 FQEIHVQLCSPEQLQPKPEV-SQLKFGTVFTDHMLQIEFNEQLGGWQAPRVSPLKYLTLHPAAKVLHYSVELFEGMKAYR 80 (302)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~-~~~~f~~~~~~~m~~~~~~~~~~~w~~g~~~~~~~~~i~~~~~~~~yG~~vfEg~r~y~ 80 (302)
+++++++++++++.+++ + ++|+||++|||||+.++|++ .+|+||+++|.++++|++.|++||||||||||||+|+
T Consensus 7 ~~~~~~~~~~~~~~~~~--~~~~l~fg~~~~d~m~~~~~~~--~~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEt~r~y~ 82 (365)
T 2a1h_A 7 AADLQLEMTQKPHKKPG--PGEPLVFGKTFTDHMLMVEWND--KGWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFK 82 (365)
T ss_dssp GGGCEECCCSSCCCCCC--TTSCCCTTCSCCSEEEEEEEET--TEECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEE
T ss_pred hhhceeccCCCccCCCc--cccccCcCCccccceeeeeccc--CeEECCEEeEcccceeCccchhhhcCceeEeEEEEEe
Confidence 45788888888875554 5 89999999999999999988 6999999999999999999999999999999999999
Q ss_pred cCCCceeecCcchhHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhccccccCCCCceeeecccccccccccccccc
Q psy16306 81 GVDGHIRMFRPEMNMDRMNRSALRAGLPQFDPEEMIQCLNRLIQIDQEWVPHTTAASLYIRPTLIGTDLFEGMKAY 156 (302)
Q Consensus 81 ~~~g~~~~Fr~~~H~~Rl~~S~~~l~~~~~~~~~l~~~~~~lv~~Ng~~vp~~~~~s~yirp~~~g~~~~~g~~~~ 156 (302)
+.+|++++|++++|++||.+||++|+||+++.++|.+++.++|..|+.|+|...+.++||||++++++...|+.+.
T Consensus 83 g~dG~i~~f~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~i~~lv~~~~~~~p~~~g~~~yiR~~~~~~~~~~g~~p~ 158 (365)
T 2a1h_A 83 GKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIEVDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQP 158 (365)
T ss_dssp CTTSCEEEESHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHTGGGSCCSTTCEEEEEEEEEECCBCCSCSCC
T ss_pred cCCCceeecCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHhccccCCCCCCceEEEEEEEEecCCccCCCCC
Confidence 9899899999999999999999999999999999999999999999999987666789999999998877777644
No 7
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei}
Probab=99.93 E-value=2.9e-27 Score=219.45 Aligned_cols=115 Identities=23% Similarity=0.377 Sum_probs=102.8
Q ss_pred cceeCCeeccCCCcccCccchhhhcCCeeeeeeeeeecCCCceeecCcchhHHHHHHHHHHcCCC-CCCHHHHHHHHHHH
Q psy16306 44 GGWQAPRVSPLKYLTLHPAAKVLHYSVELFEGMKAYRGVDGHIRMFRPEMNMDRMNRSALRAGLP-QFDPEEMIQCLNRL 122 (302)
Q Consensus 44 ~~w~~g~~~~~~~~~i~~~~~~~~yG~~vfEg~r~y~~~~g~~~~Fr~~~H~~Rl~~S~~~l~~~-~~~~~~l~~~~~~l 122 (302)
.+|+||+++|.++++||+.|+||+||||||||||+|++++|++++|++++|++||.+||++|+|| +++.++|.+++.++
T Consensus 30 ~~w~nG~~vp~~~~~i~~~drg~~yGdgvFEtir~~~~~dG~~~~f~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l 109 (328)
T 3u0g_A 30 KIWMDGKLIEWRDAKIHVLTHTLHYGMGVFEGVRAYKTADGGTAIFRLKEHTKRLLNSAKIFQMDVPFDQETLEAAQRDV 109 (328)
T ss_dssp EEEETTEEEEGGGCEEESSCHHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHH
T ss_pred EEEECCEEeehHhCccCccchHHhcCceEEEEEEEEECCCCCeeeCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Confidence 68999999999999999999999999999999999998888889999999999999999999999 89999999999999
Q ss_pred HhhccccccCCCCceeeecccccccccccccccccCCCCceEEe
Q psy16306 123 IQIDQEWVPHTTAASLYIRPTLIGTDLFEGMKAYRGVDGHIRMF 166 (302)
Q Consensus 123 v~~Ng~~vp~~~~~s~yirp~~~g~~~~~g~~~~~~~~~~i~~f 166 (302)
+..|+. .+.|||++++++....|+.+.. ..+++.++
T Consensus 110 v~~n~~-------~~~~iR~~vtrg~~~~g~~p~~-~~~~~~i~ 145 (328)
T 3u0g_A 110 VRENKL-------ESCYLRPIIWIGSEKLGVSAKG-NTIHVAIA 145 (328)
T ss_dssp HHHTTC-------SSEEEEEEEEECSSCCSTTCCC-CCEEEEEE
T ss_pred HHhcCC-------CCeEEEEEEEecCCCCCcCCCC-CCcEEEEE
Confidence 999986 6899999999988777776432 23444443
No 8
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A*
Probab=99.92 E-value=1.6e-26 Score=209.95 Aligned_cols=112 Identities=14% Similarity=0.169 Sum_probs=92.1
Q ss_pred cceeCCeeccCCCcccCccchhhhcCCeeeeeeeeeecCCCceeecCcchhHHHHHHHHHHcCCC-CCCHHHHHHHHHHH
Q psy16306 44 GGWQAPRVSPLKYLTLHPAAKVLHYSVELFEGMKAYRGVDGHIRMFRPEMNMDRMNRSALRAGLP-QFDPEEMIQCLNRL 122 (302)
Q Consensus 44 ~~w~~g~~~~~~~~~i~~~~~~~~yG~~vfEg~r~y~~~~g~~~~Fr~~~H~~Rl~~S~~~l~~~-~~~~~~l~~~~~~l 122 (302)
++|+||+++|.+++.||+.|+|||||||||||||+|++ ++|++++|++||.+||++|+|| +++.++|.+++.++
T Consensus 2 ~~~~nG~~~~~~~~~i~~~d~g~~yGdgvFEtir~~~g-----~~f~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~l 76 (277)
T 3daa_A 2 YTLWNDQIVKDEEVKIDKEDRGYQFGDGVYEVVKVYNG-----EMFTVNEHIDRLYASAEKIRITIPYTKDKFHQLLHEL 76 (277)
T ss_dssp EEEETTEEEEGGGCCBCTTBHHHHTCCEEEEEEEEETT-----EETTHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHH
T ss_pred EEEECCEEeEhHHCeechhhhHHhcccEEEEEEEEECC-----EEcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 58999999999999999999999999999999999976 8999999999999999999999 89999999999999
Q ss_pred HhhccccccCCCCceeeecccccccccccccccc-cCCCCceEEec
Q psy16306 123 IQIDQEWVPHTTAASLYIRPTLIGTDLFEGMKAY-RGVDGHIRMFR 167 (302)
Q Consensus 123 v~~Ng~~vp~~~~~s~yirp~~~g~~~~~g~~~~-~~~~~~i~~f~ 167 (302)
+..|+. .+.++|..++.+....+...+ ....+++.++.
T Consensus 77 i~~n~~-------~~~~lri~vtrG~~~r~~~~p~~~~~~~~~i~~ 115 (277)
T 3daa_A 77 VEKNEL-------NTGHIYFQVTRGTSPRAHQFPENTVKPVIIGYT 115 (277)
T ss_dssp HHHHTC-------CSEEEEEEEESCBCSCCSSCCSSCCCCEEEEEE
T ss_pred HHhcCC-------CcEEEEEEEEecCCCcCCCCCCCCCCcEEEEEE
Confidence 999985 334555555554433343322 23345555553
No 9
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A*
Probab=99.89 E-value=2.4e-24 Score=198.41 Aligned_cols=115 Identities=23% Similarity=0.401 Sum_probs=100.2
Q ss_pred cceeCCeeccCCCcccCccchhhhcCCeeeeeeeeeecCCCceeecCcchhHHHHHHHHHHcCCC-CCCHHHHHHHHHHH
Q psy16306 44 GGWQAPRVSPLKYLTLHPAAKVLHYSVELFEGMKAYRGVDGHIRMFRPEMNMDRMNRSALRAGLP-QFDPEEMIQCLNRL 122 (302)
Q Consensus 44 ~~w~~g~~~~~~~~~i~~~~~~~~yG~~vfEg~r~y~~~~g~~~~Fr~~~H~~Rl~~S~~~l~~~-~~~~~~l~~~~~~l 122 (302)
.+|+||+++|.++++|++.|+|++||||||||||+|++++|+ ++|++++|++||.+||+.|+|| +++.+++.+++.++
T Consensus 8 ~~~~ng~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~~~~G~-~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~ 86 (309)
T 1iye_A 8 YIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGP-VVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDV 86 (309)
T ss_dssp EEEETTEEEEGGGCCCCTTCHHHHHCCEEECCEEEECCTTSS-EEETHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHHH
T ss_pred eEEECCEEEEhHHcccCccchHHhccceeEEEEEEEECCCCc-EEcCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 589999999999999999999999999999999999776664 7899999999999999999999 89999999999999
Q ss_pred HhhccccccCCCCceeeecccccccccccccccccCCCCceEEe
Q psy16306 123 IQIDQEWVPHTTAASLYIRPTLIGTDLFEGMKAYRGVDGHIRMF 166 (302)
Q Consensus 123 v~~Ng~~vp~~~~~s~yirp~~~g~~~~~g~~~~~~~~~~i~~f 166 (302)
+..|+. .+.|+|++++++....|+.+.....+++.++
T Consensus 87 ~~~~~~-------~~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~ 123 (309)
T 1iye_A 87 IRKNNL-------TSAYIRPLIFVGDVGMGVNPPAGYSTDVIIA 123 (309)
T ss_dssp HHHTTC-------SSEEEEEEEEECSSCSSSSCCTTCCEEEEEE
T ss_pred HHhcCC-------CCEEEEEEEEeCCCccCCCCCCCCCcEEEEE
Confidence 999974 6789999999987666766443334444443
No 10
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A*
Probab=99.85 E-value=1e-21 Score=180.76 Aligned_cols=114 Identities=23% Similarity=0.373 Sum_probs=100.0
Q ss_pred cceeCCeeccCCCcccCccchhhhcCCeeeeeeeeeecCCCceeecCcchhHHHHHHHHHHcCCC-CCCHHHHHHHHHHH
Q psy16306 44 GGWQAPRVSPLKYLTLHPAAKVLHYSVELFEGMKAYRGVDGHIRMFRPEMNMDRMNRSALRAGLP-QFDPEEMIQCLNRL 122 (302)
Q Consensus 44 ~~w~~g~~~~~~~~~i~~~~~~~~yG~~vfEg~r~y~~~~g~~~~Fr~~~H~~Rl~~S~~~l~~~-~~~~~~l~~~~~~l 122 (302)
.+|+||+++|.+++.|++.|+|++||+|||||||+|++.+|. ++|++++|++||.+||+.|+|| +++.+++.+++.++
T Consensus 7 ~~~~nG~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~g~~g~-~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~ 85 (308)
T 2eiy_A 7 LIWMNGAFVPQEEAKTSVLSHALHYGTSVFEGIRAYETAKGP-AIFRLKEHVKRFYNSAKVLRMEIPFAPEELEEAIKEV 85 (308)
T ss_dssp SEEETTEEECGGGCCCCTTCHHHHHCCEEECCEEEECCTTSC-EEETHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHH
T ss_pred eEEECCEEeEhHHCccCccchHhhhcceEEEEEEEECCCCcc-cccCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 689999999999999999999999999999999999998886 8999999999999999999999 89999999999999
Q ss_pred HhhccccccCCCCceeeecccccccccccccccccCCCCceEE
Q psy16306 123 IQIDQEWVPHTTAASLYIRPTLIGTDLFEGMKAYRGVDGHIRM 165 (302)
Q Consensus 123 v~~Ng~~vp~~~~~s~yirp~~~g~~~~~g~~~~~~~~~~i~~ 165 (302)
+..|+. .+.|+|+++++++...|..+.....+++.+
T Consensus 86 ~~~~~~-------~~~~iR~~v~~g~~~~~~~p~~~~~~~~~i 121 (308)
T 2eiy_A 86 VRRNGY-------RSCYIRPLAWMGAKALGVNPLPNNPAEVMV 121 (308)
T ss_dssp HHHTTC-------SSEEEEEEEECCSSCCSSCCGGGCSCEEEE
T ss_pred HHhCCC-------CcEEEEEEEEecCCccCcCCCCCCCeEEEE
Confidence 999974 578999999988766666544222344433
No 11
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila}
Probab=99.82 E-value=2.3e-20 Score=168.94 Aligned_cols=106 Identities=18% Similarity=0.147 Sum_probs=90.3
Q ss_pred cceeCCeeccCCCcccCccchhhhcCCeeeeeeeeeecCCCceeecCcchhHHHHHHHHHHcCCC-CCCHHHHHHHHHHH
Q psy16306 44 GGWQAPRVSPLKYLTLHPAAKVLHYSVELFEGMKAYRGVDGHIRMFRPEMNMDRMNRSALRAGLP-QFDPEEMIQCLNRL 122 (302)
Q Consensus 44 ~~w~~g~~~~~~~~~i~~~~~~~~yG~~vfEg~r~y~~~~g~~~~Fr~~~H~~Rl~~S~~~l~~~-~~~~~~l~~~~~~l 122 (302)
.+|+|| .+++.||+.|+|++||+|||||||+|++ ++|++++|++||.+||+.|+|| +++.+++.+++.++
T Consensus 5 ~~~~nG----~~~a~i~~~d~g~~yG~gvFEtir~~~g-----~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l 75 (272)
T 3lul_A 5 RVIEDK----GDMTPSFGIDDRIFLGEGLFETIRVNSS-----KPSFAYMHWERLGNSARQLGIPFEISFDDWFEHLIQK 75 (272)
T ss_dssp EECCCC----C--CCCCCTTBGGGGTCEEEEEEEEETT-----EESSHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHH
T ss_pred EEEECC----ccccccCCccchhhcceEeEEEEEEECC-----EeCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 489999 8899999999999999999999999976 8999999999999999999999 78999999999999
Q ss_pred HhhccccccCCCCceeeecccccccccccccccccCCCCceEE
Q psy16306 123 IQIDQEWVPHTTAASLYIRPTLIGTDLFEGMKAYRGVDGHIRM 165 (302)
Q Consensus 123 v~~Ng~~vp~~~~~s~yirp~~~g~~~~~g~~~~~~~~~~i~~ 165 (302)
+..|+. .+.|+|+.++++....|+.+.....+++.+
T Consensus 76 ~~~~~~-------~~~~irl~v~rg~~~~g~~~~~~~~~~~~~ 111 (272)
T 3lul_A 76 IQKDNL-------YHGGIKAILSGGPASRGLAERGQVSQLIFQ 111 (272)
T ss_dssp HHHTTC-------SSEEEEEEEECCBCCSSTTCCCSSEEEEEE
T ss_pred HHhcCC-------CCEEEEEEEEecCCccCcCCCCCCCcEEEE
Confidence 999985 678999999987766666654443344433
No 12
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum}
Probab=99.79 E-value=1.4e-19 Score=166.98 Aligned_cols=95 Identities=15% Similarity=-0.002 Sum_probs=85.4
Q ss_pred cceeC---Cee--ccCCCcccCccchhhhcCCeeeeeeeeeecCCCceeecCcchhHHHHHHHHHHcCCCCCCHHHHHHH
Q psy16306 44 GGWQA---PRV--SPLKYLTLHPAAKVLHYSVELFEGMKAYRGVDGHIRMFRPEMNMDRMNRSALRAGLPQFDPEEMIQC 118 (302)
Q Consensus 44 ~~w~~---g~~--~~~~~~~i~~~~~~~~yG~~vfEg~r~y~~~~g~~~~Fr~~~H~~Rl~~S~~~l~~~~~~~~~l~~~ 118 (302)
.+|+| |++ +|.+++.||+.|+||+||||||||||+|++ ++|++++|++||.+||+.|+||.++.+++.++
T Consensus 16 ~v~~n~~~G~~~~~~~~~a~i~~~Drg~~yGdgvFEtirv~~G-----~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~l~~~ 90 (315)
T 3sno_A 16 ILIVEPYGGSIRQQNPNLPMVFWDDAALTRGDGIFETLLIRDG-----HACNVRRHGERFKASAALLGLPEPILEDWEKA 90 (315)
T ss_dssp EEEECSTTCCEEEECTTSCCCCTTBTTTTTCCEEEEEEEEETT-----EETTHHHHHHHHHHHHHHHTCCCCCHHHHHHH
T ss_pred EEEEECCCCeEEEeeHHHCcccccchHhhcCCEeEEEEEEECC-----EECCHHHHHHHHHHHHHHhCCCCcCHHHHHHH
Confidence 48889 999 999999999999999999999999999975 89999999999999999999994489999999
Q ss_pred HHHHHhh----ccccccCCCCceeeecccccccccc
Q psy16306 119 LNRLIQI----DQEWVPHTTAASLYIRPTLIGTDLF 150 (302)
Q Consensus 119 ~~~lv~~----Ng~~vp~~~~~s~yirp~~~g~~~~ 150 (302)
+.+++.. |+. .+.|+|++++++...
T Consensus 91 i~~~v~~~~~~n~~-------~~~~iRl~vtrG~~~ 119 (315)
T 3sno_A 91 TQMGIESWYSHPNA-------GEASCTWTLSRGRSS 119 (315)
T ss_dssp HHHHHHHHHTC--C-------CCEEEEEEEECCBTT
T ss_pred HHHHHHhhcccCCC-------CCEEEEEEEEeCCCC
Confidence 9999988 443 678999999986543
No 13
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A*
Probab=99.74 E-value=3.4e-18 Score=154.36 Aligned_cols=104 Identities=9% Similarity=0.001 Sum_probs=87.3
Q ss_pred ceeCCeeccCCCcccCccchhhhcCCeeeeeeeeeecCCCceeecCcchhHHHHHHHHHHcCCCCCCHHHHHHHHHHHHh
Q psy16306 45 GWQAPRVSPLKYLTLHPAAKVLHYSVELFEGMKAYRGVDGHIRMFRPEMNMDRMNRSALRAGLPQFDPEEMIQCLNRLIQ 124 (302)
Q Consensus 45 ~w~~g~~~~~~~~~i~~~~~~~~yG~~vfEg~r~y~~~~g~~~~Fr~~~H~~Rl~~S~~~l~~~~~~~~~l~~~~~~lv~ 124 (302)
+|+||+ .++.|++.|+|++||||||||||+|+| ++|++++|++||.+||+.|+||..+.+++.+++.+++.
T Consensus 2 ~~~nG~----~~~~i~~~d~g~~yG~gvfEtir~~~G-----~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~i~~~~~ 72 (269)
T 1i2k_A 2 FLINGH----KQESLAVSDRATQFGDGCFTTARVIDG-----KVSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAA 72 (269)
T ss_dssp EEETTE----EESCCCTTCHHHHHCCEEEEEEEEETT-----EETTHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred EEECCC----cCCccCccccccccceeEEEEEEEECC-----EEecHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHH
Confidence 689999 468899999999999999999999965 89999999999999999999993399999999999987
Q ss_pred hccccccCCCCceeeecccccccccccccccccCCCCceEEe
Q psy16306 125 IDQEWVPHTTAASLYIRPTLIGTDLFEGMKAYRGVDGHIRMF 166 (302)
Q Consensus 125 ~Ng~~vp~~~~~s~yirp~~~g~~~~~g~~~~~~~~~~i~~f 166 (302)
.+ .+.|+|+.++++....|..+.....+++.+.
T Consensus 73 ~~---------~~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~ 105 (269)
T 1i2k_A 73 EQ---------QNGVLKVVISRGSGGRGYSTLNSGPATRILS 105 (269)
T ss_dssp HH---------CSEEEEEEEECCSCCSTTCCTTCCCCEEEEE
T ss_pred hC---------CCeEEEEEEEcCCCCCCCCCccCCCcEEEEE
Confidence 64 2569999999887666766554445555444
No 14
>2xpf_A 4-amino-4-deoxychorismate lyase; para-aminobenzoic acid, folate biosynthesis; HET: PLP PG4; 1.75A {Pseudomonas aeruginosa} PDB: 2y4r_A* 2xpf_B*
Probab=99.72 E-value=1.3e-17 Score=152.23 Aligned_cols=104 Identities=16% Similarity=0.147 Sum_probs=87.2
Q ss_pred cceeCCeeccCCCcccCccchhhhcCCeeeeeeeeeecCCCceeecCcchhHHHHHHHHHHcCCCCCCHHHHHHHHHHHH
Q psy16306 44 GGWQAPRVSPLKYLTLHPAAKVLHYSVELFEGMKAYRGVDGHIRMFRPEMNMDRMNRSALRAGLPQFDPEEMIQCLNRLI 123 (302)
Q Consensus 44 ~~w~~g~~~~~~~~~i~~~~~~~~yG~~vfEg~r~y~~~~g~~~~Fr~~~H~~Rl~~S~~~l~~~~~~~~~l~~~~~~lv 123 (302)
.+|+||+++ ++|++.|+|++||||||||||+|+| ++|++++|++||.+||+.|+||. +.+++.+++.+++
T Consensus 23 ~~~~nG~~~----~~i~~~d~g~~yGdgvFEtir~~~G-----~~~~l~~Hl~RL~~Sa~~l~~~~-~~~~l~~~i~~~v 92 (292)
T 2xpf_A 23 LDWVDGRPA----AELSVRDRGLAYGDGLFETLAVRAG-----TPRLLERHLARLEEGCRRLAIPL-DTAALRQELLAFC 92 (292)
T ss_dssp CEEETTEEC----SEEETTBHHHHHCCEEEEEEEEETT-----EETTHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHHH
T ss_pred EEEECCEEE----EEEcccchhhhcCcEeEEEEEEECC-----EECCHHHHHHHHHHHHHhcCCCC-CHHHHHHHHHHHH
Confidence 489999998 8999999999999999999999965 89999999999999999999994 2899999999998
Q ss_pred hhccccccCCCCceeeecccccccccccccccccCCCCceEEe
Q psy16306 124 QIDQEWVPHTTAASLYIRPTLIGTDLFEGMKAYRGVDGHIRMF 166 (302)
Q Consensus 124 ~~Ng~~vp~~~~~s~yirp~~~g~~~~~g~~~~~~~~~~i~~f 166 (302)
..+ .+.|+|+.++++....|..+.....+++.+.
T Consensus 93 ~~~---------~~~~iR~~v~rg~~~~g~~p~~~~~~~~~i~ 126 (292)
T 2xpf_A 93 AAL---------GDGVAKLIVTRGEGLRGYAPPAEASPRRILS 126 (292)
T ss_dssp HHH---------CSEEEEEEEECCBCCSSSSCCTTCCCEEEEE
T ss_pred HhC---------CCcEEEEEEEecCCCCCCCCCCCCCcEEEEE
Confidence 773 2459999999776566766554444555444
No 15
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus}
Probab=99.68 E-value=3.5e-17 Score=145.85 Aligned_cols=91 Identities=21% Similarity=0.243 Sum_probs=80.0
Q ss_pred ceeCCeeccCCCcccCccchhhhc-CCeeeeeeeeeecCCCceeecCcchhHHHHHHHHHHcCCC-CCCHHHHHHHHHHH
Q psy16306 45 GWQAPRVSPLKYLTLHPAAKVLHY-SVELFEGMKAYRGVDGHIRMFRPEMNMDRMNRSALRAGLP-QFDPEEMIQCLNRL 122 (302)
Q Consensus 45 ~w~~g~~~~~~~~~i~~~~~~~~y-G~~vfEg~r~y~~~~g~~~~Fr~~~H~~Rl~~S~~~l~~~-~~~~~~l~~~~~~l 122 (302)
.|+||+.+ +++.|+|++| |+|||||||+|+| ++|++++|++||.+||+.|+|| +++ +++.+++.++
T Consensus 2 ~~~nG~~~------~~~~d~g~~y~G~gvFEtir~~~G-----~~~~l~~Hl~RL~~Sa~~l~~~~p~~-~~l~~~i~~~ 69 (246)
T 2zgi_A 2 RLLNGTPL------ALALPEAFLYHGASVFTTLRAEGG-----RPLWLEEHLARLRRHALALGLSYPGD-EAFLEDLEAL 69 (246)
T ss_dssp EEETTEEC------CCSSCHHHHHSCCCEEEEEEEETT-----EETTHHHHHHHHHHHHHHTTCCCCCH-HHHHHHHHHH
T ss_pred EEECCccc------CCCccCcccccCeeEEEEEEEECC-----EeCCHHHHHHHHHHHHHHhCCCCCCH-HHHHHHHHHH
Confidence 58899954 4999999999 9999999999975 8999999999999999999999 777 9999999999
Q ss_pred Hhhc-cccccCCCCceeeecccccccccccccc
Q psy16306 123 IQID-QEWVPHTTAASLYIRPTLIGTDLFEGMK 154 (302)
Q Consensus 123 v~~N-g~~vp~~~~~s~yirp~~~g~~~~~g~~ 154 (302)
+..| +. .+.|+|+++++++...+..
T Consensus 70 ~~~~~~~-------~~~~vR~~v~~g~~~~~~~ 95 (246)
T 2zgi_A 70 LRAFPKA-------PCLRLRFTVGEGVRLSEAR 95 (246)
T ss_dssp TTSCTTC-------SEEEEEEEEETTEEEEEEE
T ss_pred HHhcCCC-------CCEEEEEEEECCCCccCcC
Confidence 9887 43 6889999999876655443
No 16
>3dth_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP OBZ; 1.85A {Mycobacterium smegmatis} PDB: 3dtf_A* 3dtg_A* 3jz6_A* 3ht5_A*
Probab=99.65 E-value=3.7e-18 Score=160.38 Aligned_cols=174 Identities=26% Similarity=0.372 Sum_probs=128.0
Q ss_pred HHhhccccccCC-CCceeeecccccccccccccccccCCCCceEEecccchHHHHHHHHHHcCCCCCCHHHHHHHHHHHH
Q psy16306 122 LIQIDQEWVPHT-TAASLYIRPTLIGTDLFEGMKAYRGVDGHIRMFRPEMNMDRMNQSALRAGLPQFDPEEMIQCLNRLI 200 (302)
Q Consensus 122 lv~~Ng~~vp~~-~~~s~yirp~~~g~~~~~g~~~~~~~~~~i~~f~~~~h~~Rl~~s~~~l~~~~~~~e~l~~gi~~ii 200 (302)
.+|.||.++|.+ ...++..|.++||+++|||+++|++.++.+.+|+|++|++||.+||+++.||+++.+++.+++..++
T Consensus 52 ~~W~~g~i~p~~~~~i~~~d~gl~yGdgvFEglkay~~~dG~i~lFrl~~H~~RL~~Sa~~L~mp~~~~e~l~~~i~~lv 131 (372)
T 3dth_A 52 EGWHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIPELPEEVFIESLRQLI 131 (372)
T ss_dssp TEEEEEEEEESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHH
T ss_pred CeEECCcEeehHhcccCccccHhhcCcEEEEEEEEEECCCCcEeecCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHH
Confidence 468999999986 4789999999999999999999988888889999999999999999999999889999999999999
Q ss_pred HhcccccccC-CCceeeecceeeccccccccccccCCC------CccccCCchhhHHHHHHHH-HHhCCC-CC----C-H
Q psy16306 201 QIDQEWVPHT-TAASLYIRPTLIGTDLFEGMKAYRGVD------GHIRMFRPEMNMDRMNRSA-LRAGLP-QF----D-P 266 (302)
Q Consensus 201 ~~ng~~vp~~-~~~s~ylr~~l~g~~~feG~r~~~~~~------~~~~if~~~~h~~RL~~Sa-~~r~~~-~~----~-~ 266 (302)
..|+.|+|.. ...++|+|+++++++...|+++..... +-...|....+..++..|. +.|..| .. . .
T Consensus 132 ~~n~~~vp~~~~~~~lYiRp~~~~~~~~~G~~p~~~~~~~i~~~p~~~y~~~g~~~v~l~v~~~~~R~~p~g~~~~K~~g 211 (372)
T 3dth_A 132 AVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGG 211 (372)
T ss_dssp HHHGGGSCCSSSSCEEEEEEEEEECCCCSSCSCCSEEEEEEEEEEESCSSSCSSSCEEEEECSSCCSCCTTSSTTSCCHH
T ss_pred HhccccCCCCCCCCcEEEEEEEEcCCCcCCcCCCCCeEEEEEEeeCchhhccCCccEEEEEccceeccCCCcccchhhHh
Confidence 9999999974 346899999999988777776532100 0001111111233343332 223222 10 1 1
Q ss_pred HHH----------HHHHHHHHHHc---CCccCCCCcccEEEE
Q psy16306 267 EEM----------IQCLNRLIQID---QEWVPHTTAASLYIR 295 (302)
Q Consensus 267 ~~l----------~~~~~e~l~~n---~~~v~e~~~~n~yir 295 (302)
..+ .++++++|.+| +|+|.|++.+|+|+.
T Consensus 212 NY~~~~la~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v 253 (372)
T 3dth_A 212 NYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFV 253 (372)
T ss_dssp HHHTTHHHHHHHHHTTCSEEEEECTTTSCBEEEETTEEEEEE
T ss_pred hhHHHHHHHHHHHHcCCCEEEEEcCCCCCEEEEcCceeEEEE
Confidence 111 34556667777 589999999999875
No 17
>3uzo_A Branched-chain-amino-acid aminotransferase; BCAT, amino-acid biosynthesis, branched-CH acid biosynthesis, pyridoxal phosphate, L-GLUT; HET: PLP GLU; 2.00A {Deinococcus radiodurans} PDB: 3uzb_A* 3uyy_A*
Probab=99.65 E-value=8.3e-18 Score=157.45 Aligned_cols=172 Identities=23% Similarity=0.324 Sum_probs=128.0
Q ss_pred hhccccccCC-CCceeeecccccccccccccccccCCCCceEEecccchHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHh
Q psy16306 124 QIDQEWVPHT-TAASLYIRPTLIGTDLFEGMKAYRGVDGHIRMFRPEMNMDRMNQSALRAGLPQFDPEEMIQCLNRLIQI 202 (302)
Q Consensus 124 ~~Ng~~vp~~-~~~s~yirp~~~g~~~~~g~~~~~~~~~~i~~f~~~~h~~Rl~~s~~~l~~~~~~~e~l~~gi~~ii~~ 202 (302)
|.||.++|.+ ...++..|.++||+++|||++++++.++.+.+|++++|++||.+||+++.||+++.+++.+.+..++..
T Consensus 49 w~ng~i~p~~~~~i~~~d~gl~yGdgvFE~ir~y~~~dG~i~lfrl~~Hl~RL~~Sa~~L~ip~~~~e~l~~~i~~lv~~ 128 (358)
T 3uzo_A 49 WDAGTLTEDNQIHLAEGSTALHYGQQCFEGLKAYRCADGSINLFRPDQNAARMRMSCRRLLMPELSDEQFIDACLQVVRA 128 (358)
T ss_dssp ECCCEEESCCEEEEETTCHHHHSCCEEECCEEEEECTTSCEEECCHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHH
T ss_pred EECCEEeEcccceeChHHcceecCcEEEEEEEEEECCCCcEeecCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHH
Confidence 7899999986 478889999999999999999998888889999999999999999999999988999999999999999
Q ss_pred cccccccC-CCceeeecceeeccccccccccccCCC------CccccCCchhhHHHHHHHHHHhCCC-CCC-----HHHH
Q psy16306 203 DQEWVPHT-TAASLYIRPTLIGTDLFEGMKAYRGVD------GHIRMFRPEMNMDRMNRSALRAGLP-QFD-----PEEM 269 (302)
Q Consensus 203 ng~~vp~~-~~~s~ylr~~l~g~~~feG~r~~~~~~------~~~~if~~~~h~~RL~~Sa~~r~~~-~~~-----~~~l 269 (302)
|+.|+|.. ...++|+|+++++++...|+.+..... +....+.......++..|.+.|..| ... ...+
T Consensus 129 n~~~vp~~~~~~~~yiR~~v~~~~~~~G~~p~~~~~~~i~~~P~~~~~~~g~~~v~l~~~~~~R~~p~~~~~~K~~~NYl 208 (358)
T 3uzo_A 129 NEHFLPPYGTGGSLYLRPFVIGVGDNIGVRTAPEFIFSVFCVPVGPYFKGGLTPTNFITSDYDRAAPHGTGAAKVGGNYA 208 (358)
T ss_dssp TGGGSCCTTSCCEEEEEEEEEEESSCCSSSCCSEEEEEEEEEEECCSSCSSSCCEEEECCSCCSSCTTSSTTSCBHHHHH
T ss_pred cCCcCCCCCCCceEEEEEEEEecCCccccCCCCCeEEEEEEecChhhhhcCCccEEEEEEeeeccCCCccccccchhhhH
Confidence 99999864 335899999999988877776532100 0000111111224444444444433 110 1111
Q ss_pred ----------HHHHHHHHHHcC---CccCCCCcccEEEE
Q psy16306 270 ----------IQCLNRLIQIDQ---EWVPHTTAASLYIR 295 (302)
Q Consensus 270 ----------~~~~~e~l~~n~---~~v~e~~~~n~yir 295 (302)
.++++++|.+|. |+|+|++.+|+|+.
T Consensus 209 ~~vla~~eA~~~G~~e~l~ld~~~~g~V~E~~~sNif~v 247 (358)
T 3uzo_A 209 ASLLPGYEAKKRDFADVIYLDPATHTTIEEAGAANFFAI 247 (358)
T ss_dssp HHHHHHHHHHHTTCSEECCBCTTTSCBBCBCSSSEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEEeCCCCCeEEEcCCeeEEEE
Confidence 244566677774 99999999999975
No 18
>4dqn_A Putative branched-chain amino acid aminotransfera; aminotransferase, transferase; 1.97A {Streptococcus mutans}
Probab=99.63 E-value=1.1e-17 Score=156.00 Aligned_cols=172 Identities=24% Similarity=0.370 Sum_probs=129.3
Q ss_pred hhccccccCC-CCceeeecccccccccccccccccCCCCceEEecccchHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHh
Q psy16306 124 QIDQEWVPHT-TAASLYIRPTLIGTDLFEGMKAYRGVDGHIRMFRPEMNMDRMNQSALRAGLPQFDPEEMIQCLNRLIQI 202 (302)
Q Consensus 124 ~~Ng~~vp~~-~~~s~yirp~~~g~~~~~g~~~~~~~~~~i~~f~~~~h~~Rl~~s~~~l~~~~~~~e~l~~gi~~ii~~ 202 (302)
|.||.++|.+ ...++..|.++||+++|||++++++.++.+.+|++++|++||.+||+.+.||+++.+++.+.+..++..
T Consensus 34 w~nG~~vp~~~~~i~~~d~gl~yGdgvFE~ir~~~g~dg~~~~f~l~~Hl~RL~~Sa~~L~i~~~~~~~l~~~i~~lv~~ 113 (345)
T 4dqn_A 34 WDDGKLTEDATLHISESSPALHYGQEAFEGLKAYRTKDGSVQLFRPNMNAERLQRTADRLLMPQVPTDKFIDAAKQVVRA 113 (345)
T ss_dssp ECCCEEESCCSCCCCTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHH
T ss_pred EECCEEeEhhhcccCccccccccccEEEEEEEEEeCCCCcccccCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHh
Confidence 7899999986 589999999999999999999999988888999999999999999999999988999999999999999
Q ss_pred cccccccC-CCceeeecceeeccccccccccccCCC-----Ccc-ccCCchhhHHHHHHHH-HHhCCC-CC----C-HHH
Q psy16306 203 DQEWVPHT-TAASLYIRPTLIGTDLFEGMKAYRGVD-----GHI-RMFRPEMNMDRMNRSA-LRAGLP-QF----D-PEE 268 (302)
Q Consensus 203 ng~~vp~~-~~~s~ylr~~l~g~~~feG~r~~~~~~-----~~~-~if~~~~h~~RL~~Sa-~~r~~~-~~----~-~~~ 268 (302)
|+.|+|.. ...++|+|+++++++...|+.+...+. .+. ..+.....+.|+..|. +.|..+ .. + ...
T Consensus 114 n~~~vp~~~~~~~~yiR~~v~~~~~~~g~~p~~~~~~~i~~~p~~~~~~~~~~gv~l~~~~~~~R~~~~~~~~~Kt~~ny 193 (345)
T 4dqn_A 114 NEEYVPPYGTGATLYLRPLLIGVGDVIGVHPADEYIFTIFAMPVGNYFKGGLAPTNFLIQDDYDRAAPHGTGAAKVGGNY 193 (345)
T ss_dssp TGGGSCCTTSSCEEEEEEEEEEESCCCSSCCCSEEEEEEEEEEECCSCTTSCCCEEEEECTTCCSSCTTSSTTSCCHHHH
T ss_pred ccccCCCCCCCCcEEEEEEEEeCCCccCCCCCCCeEEEEEEEECccccccCCCCEEEEEccceEecCCCccccccccccC
Confidence 99999973 235899999998887777765421100 000 1111112345666666 344333 11 1 222
Q ss_pred H----------HHHHHHHHHHcC---CccCCCCcccEEEE
Q psy16306 269 M----------IQCLNRLIQIDQ---EWVPHTTAASLYIR 295 (302)
Q Consensus 269 l----------~~~~~e~l~~n~---~~v~e~~~~n~yir 295 (302)
+ .++++|+|.+|. |+|+|++.+|+|+.
T Consensus 194 l~~vla~~eA~~~G~de~l~ld~~~~g~v~E~~~sNif~v 233 (345)
T 4dqn_A 194 AASLLPGKVAHERQFSDVIYLDPATHTKIEEVGSANFFGI 233 (345)
T ss_dssp HHHHHHHHHHHHTTCSCEEEECTTTSCBEEEETTEEEEEE
T ss_pred HHHHHHHHHHHHCCCCEEEEEcCCCCCeEEEcCCceEEEE
Confidence 2 234455666775 99999999999975
No 19
>3dtg_A Branched-chain amino acid aminotransferase; open twisted alpha/beta; HET: PLP; 1.90A {Mycobacterium smegmatis} PDB: 3dtf_A* 3jz6_A* 3ht5_A*
Probab=99.62 E-value=1.5e-16 Score=149.74 Aligned_cols=111 Identities=35% Similarity=0.584 Sum_probs=101.5
Q ss_pred hhccccccCC-CCceeeecccccccccccccccccCCCCceEEecccchHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHh
Q psy16306 124 QIDQEWVPHT-TAASLYIRPTLIGTDLFEGMKAYRGVDGHIRMFRPEMNMDRMNQSALRAGLPQFDPEEMIQCLNRLIQI 202 (302)
Q Consensus 124 ~~Ng~~vp~~-~~~s~yirp~~~g~~~~~g~~~~~~~~~~i~~f~~~~h~~Rl~~s~~~l~~~~~~~e~l~~gi~~ii~~ 202 (302)
|.||.++|.+ ...++..+.++||+++|||+|+|++.++.|.+|++++|..||.+||+++.||..+.+++.+.+..++..
T Consensus 54 W~ng~ivp~~~~~i~p~~~~lhYG~gvFEgiraY~~~dG~i~~Fr~~~h~~Rl~~Sa~~l~iP~~~~e~~~~~~~~l~~~ 133 (372)
T 3dtg_A 54 WHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAV 133 (372)
T ss_dssp EEEEEEEESCCEEECTTCTHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHH
T ss_pred EeCCEEEEchhceeCcchhhhhccceeeeeEEEEECCCCeEEeeCchHHHHHHhhcccccCCCCCCHHHHHHHHHHHHHH
Confidence 8899999987 489999999999999999999999888999999999999999999999999977899999999999999
Q ss_pred cccccccCC-Cceeeecceeecccccccccccc
Q psy16306 203 DQEWVPHTT-AASLYIRPTLIGTDLFEGMKAYR 234 (302)
Q Consensus 203 ng~~vp~~~-~~s~ylr~~l~g~~~feG~r~~~ 234 (302)
|.+|+|... ..++|+||++++++...|+++..
T Consensus 134 ~~~~v~~~~~~~~~YiRp~~~~~~~~lgv~p~~ 166 (372)
T 3dtg_A 134 DEKWVPPAGGEESLYLRPFVIATEPGLGVRPSN 166 (372)
T ss_dssp HGGGSCCSSSSCEEEEEEEEEECCCCCSCSCCS
T ss_pred hhhhccccCCCCceEEEEEEEeecCccCcCCCC
Confidence 999998754 36899999999999888887653
No 20
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8}
Probab=99.59 E-value=5.7e-16 Score=140.92 Aligned_cols=87 Identities=20% Similarity=0.159 Sum_probs=79.5
Q ss_pred ceeCCeeccCCCcccCccchhhhcCCeeeeeeeeeecCCCceeecCcchhHHHHHHHHHHcCCC-CCCHHHHHHHHHHHH
Q psy16306 45 GWQAPRVSPLKYLTLHPAAKVLHYSVELFEGMKAYRGVDGHIRMFRPEMNMDRMNRSALRAGLP-QFDPEEMIQCLNRLI 123 (302)
Q Consensus 45 ~w~~g~~~~~~~~~i~~~~~~~~yG~~vfEg~r~y~~~~g~~~~Fr~~~H~~Rl~~S~~~l~~~-~~~~~~l~~~~~~lv 123 (302)
-|.+|++++..+++|++.|+|+ |+|||||||+|++ ++|++++|++||.+||+.|+|| +++.+++.+++.+++
T Consensus 17 ~~~~~~~~~~~~~~i~~~d~g~--G~gvFEtir~~~G-----~~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~l~~~i~~~~ 89 (285)
T 3csw_A 17 WRGKFRRADEISLDFSLFEKSL--QGAVYETLRTYSR-----APFAAYKHYTRLKRSADFFNLPLSLSFDEFTKVLKAGA 89 (285)
T ss_dssp ETTEEEESSEEEEEHHHHHHHT--TCCEEEEEEEETT-----EETTHHHHHHHHHHHHHTTTCCCSSCHHHHHHHHHHHH
T ss_pred EccCceEcccccCEeCCccccc--ceeeEEEEEEECC-----EECCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 4789999999999999999999 9999999999975 8999999999999999999999 899999999999999
Q ss_pred hhccccccCCCCceeeecccccc
Q psy16306 124 QIDQEWVPHTTAASLYIRPTLIG 146 (302)
Q Consensus 124 ~~Ng~~vp~~~~~s~yirp~~~g 146 (302)
..|+ .+.|+|+++..
T Consensus 90 ~~~~--------~~~~iR~~v~~ 104 (285)
T 3csw_A 90 DEFK--------QEVRIKVYLFP 104 (285)
T ss_dssp TTCS--------SCEEEEEEECT
T ss_pred HhhC--------CCeEEEEEEEc
Confidence 8875 23588888754
No 21
>2a1h_A Branched chain aminotransferase; fold type IV; HET: PLP GBN; 1.80A {Homo sapiens} SCOP: e.17.1.1 PDB: 1ekp_A* 1ekv_A* 1ekf_A* 1kta_A* 1kt8_A* 2hhf_B* 2hhf_A* 2hgw_A* 2hg8_A* 2hgx_A* 2hdk_A*
Probab=99.58 E-value=6.8e-17 Score=151.85 Aligned_cols=173 Identities=27% Similarity=0.487 Sum_probs=125.9
Q ss_pred HhhccccccCC-CCceeeecccccccccccccccccCCCCceEEecccchHHHHHHHHHHcCCCCCCHHHHHHHHHHHHH
Q psy16306 123 IQIDQEWVPHT-TAASLYIRPTLIGTDLFEGMKAYRGVDGHIRMFRPEMNMDRMNQSALRAGLPQFDPEEMIQCLNRLIQ 201 (302)
Q Consensus 123 v~~Ng~~vp~~-~~~s~yirp~~~g~~~~~g~~~~~~~~~~i~~f~~~~h~~Rl~~s~~~l~~~~~~~e~l~~gi~~ii~ 201 (302)
+|.||.++|.+ ...++..|.++||+++|||++++++.++.|.+|++++|++||.+||+.++||+++.+++.+.+..++.
T Consensus 47 ~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEt~r~y~g~dG~i~~f~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~i~~lv~ 126 (365)
T 2a1h_A 47 GWGQPRIQPFQNLTLHPASSSLHYSLQLFEGMKAFKGKDQQVRLFRPWLNMDRMLRSAMRLCLPSFDKLELLECIRRLIE 126 (365)
T ss_dssp EECCCEEEESCCEEECTTBHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH
T ss_pred eEECCEEeEcccceeCccchhhhcCceeEeEEEEEecCCCceeecCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHH
Confidence 68999999986 47899999999999999999999888888899999999999999999999998899999999999999
Q ss_pred hcccccccCCCceeeecceeeccccccccccccCCC-----Ccc-ccCCch-hhHHHHHHHHH-HhCCC----------C
Q psy16306 202 IDQEWVPHTTAASLYIRPTLIGTDLFEGMKAYRGVD-----GHI-RMFRPE-MNMDRMNRSAL-RAGLP----------Q 263 (302)
Q Consensus 202 ~ng~~vp~~~~~s~ylr~~l~g~~~feG~r~~~~~~-----~~~-~if~~~-~h~~RL~~Sa~-~r~~~----------~ 263 (302)
.|+.|+|.....++|+|+++++++...|+.+...+. .+. ..+... ....++..+.. .|..+ +
T Consensus 127 ~~~~~~p~~~g~~~yiR~~~~~~~~~~g~~p~~~~~~~i~~~p~~~~~~~g~~~~v~l~~~~~~~R~~~~~~~~~Kt~~n 206 (365)
T 2a1h_A 127 VDKDWVPDAAGTSLYVRPVLIGNEPSLGVSQPRRALLFVILCPVGAYFPGGSVTPVSLLADPAFIRAWVGGVGNYKLGGN 206 (365)
T ss_dssp HTGGGSCCSTTCEEEEEEEEEECCBCCSCSCCSEEEEEEEEEEECCSSSSSSCCCEEEEECTTCCSCCTTSSTTSCBGGG
T ss_pred hccccCCCCCCceEEEEEEEEecCCccCCCCCCCcEEEEEEEECccccccccccceEEEEccccccCCCCccchhchhhc
Confidence 999999864434789999998887666654321000 000 001000 11233333332 22111 1
Q ss_pred CCHHH------HHHHHHHHHHH-c-CCccCCCCcccEEEE
Q psy16306 264 FDPEE------MIQCLNRLIQI-D-QEWVPHTTAASLYIR 295 (302)
Q Consensus 264 ~~~~~------l~~~~~e~l~~-n-~~~v~e~~~~n~yir 295 (302)
+...- ..++++|+|.+ | +|+|+|++.+|+|+.
T Consensus 207 y~~~~la~~eA~~~G~de~L~l~d~~G~V~E~~~sNif~v 246 (365)
T 2a1h_A 207 YGPTVLVQQEALKRGCEQVLWLYGPDHQLTEVGTMNIFVY 246 (365)
T ss_dssp TTTHHHHHHHHHHTTCSEEEEEETTTTEEEEETTEEEEEE
T ss_pred cHHHHHHHHHHHHcCCCeEEEEECCCCeEEEcCceEEEEE
Confidence 21111 13456677888 7 899999999999875
No 22
>2coi_A Branched chain aminotransferase 1, cytosolic; PLP-dependent enzyme; HET: PLP GBN; 1.90A {Homo sapiens} PDB: 2cog_A* 2coj_A* 2abj_A*
Probab=99.47 E-value=3e-14 Score=134.60 Aligned_cols=103 Identities=50% Similarity=0.852 Sum_probs=93.0
Q ss_pred HHHhcccccccCC-CceeeecceeeccccccccccccCCCCccccCCchhhHHHHHHHHHHhCCCCCCHHHHHHHHHHHH
Q psy16306 199 LIQIDQEWVPHTT-AASLYIRPTLIGTDLFEGMKAYRGVDGHIRMFRPEMNMDRMNRSALRAGLPQFDPEEMIQCLNRLI 277 (302)
Q Consensus 199 ii~~ng~~vp~~~-~~s~ylr~~l~g~~~feG~r~~~~~~~~~~if~~~~h~~RL~~Sa~~r~~~~~~~~~l~~~~~e~l 277 (302)
..|.||+++|..+ ..++..+.++||+++|||+|+|+..+|.+.+|++++|+.||..|+.++.+|+++.+++.+++.+++
T Consensus 66 ~~w~ng~~~p~~~~~i~~~d~~l~yG~gvFEg~k~y~g~dg~i~~frld~H~~RL~~Sa~~l~~p~~~~e~~~~~i~~lv 145 (386)
T 2coi_A 66 FGWEKPHIKPLQNLSLHPGSSALHYAVELFEGLKAFRGVDNKIRLFQPNLNMDRMYRSAVRATLPVFDKEELLECIQQLV 145 (386)
T ss_dssp TEECCCEEEECCCEEECTTCHHHHSCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHH
T ss_pred cEEECCEEeecccCccCcccchhhcCceeEEEEEEEeCCCCceeecCHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHH
Confidence 5699999999865 456788899999999999999987777678999999999999999999999888999999999999
Q ss_pred HHcCCccCCCCcccEEEEEEeeec
Q psy16306 278 QIDQEWVPHTTAASLYIRPTLIGT 301 (302)
Q Consensus 278 ~~n~~~v~e~~~~n~yir~~~~~~ 301 (302)
.+|..||+++.+.++||||+++|+
T Consensus 146 ~~~~~~vp~~~g~~~yiR~~~~~~ 169 (386)
T 2coi_A 146 KLDQEWVPYSTSASLYIRPTFIGT 169 (386)
T ss_dssp HHTGGGSCSSSSCEEEEEEEEEEC
T ss_pred HhccccCCCCCCccEEEEEEEEec
Confidence 999889998777899999999976
No 23
>3u0g_A Putative branched-chain amino acid aminotransfera; structural genomics, seattle structural genomics center for infectious disease; 1.90A {Burkholderia pseudomallei}
Probab=99.40 E-value=1.2e-13 Score=127.87 Aligned_cols=96 Identities=23% Similarity=0.377 Sum_probs=86.4
Q ss_pred HHHhcccccccCC-CceeeecceeeccccccccccccCCCCccccCCchhhHHHHHHHHHHhCCC-CCCHHHHHHHHHHH
Q psy16306 199 LIQIDQEWVPHTT-AASLYIRPTLIGTDLFEGMKAYRGVDGHIRMFRPEMNMDRMNRSALRAGLP-QFDPEEMIQCLNRL 276 (302)
Q Consensus 199 ii~~ng~~vp~~~-~~s~ylr~~l~g~~~feG~r~~~~~~~~~~if~~~~h~~RL~~Sa~~r~~~-~~~~~~l~~~~~e~ 276 (302)
.+|.||+++|.++ ..++.+++++||+++|||+|+|++++|..++|++++|+.||..|+..+.++ +++.+++.+++.++
T Consensus 30 ~~w~nG~~vp~~~~~i~~~drg~~yGdgvFEtir~~~~~dG~~~~f~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l 109 (328)
T 3u0g_A 30 KIWMDGKLIEWRDAKIHVLTHTLHYGMGVFEGVRAYKTADGGTAIFRLKEHTKRLLNSAKIFQMDVPFDQETLEAAQRDV 109 (328)
T ss_dssp EEEETTEEEEGGGCEEESSCHHHHHCCEEECCEEEEECTTSCEEEESHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHH
T ss_pred EEEECCEEeehHhCccCccchHHhcCceEEEEEEEEECCCCCeeeCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
Confidence 5899999999865 467799999999999999999987665458999999999999999999999 88999999999999
Q ss_pred HHHcCCccCCCCcccEEEEEEeeec
Q psy16306 277 IQIDQEWVPHTTAASLYIRPTLIGT 301 (302)
Q Consensus 277 l~~n~~~v~e~~~~n~yir~~~~~~ 301 (302)
+++|+ ..++||||+++..
T Consensus 110 v~~n~-------~~~~~iR~~vtrg 127 (328)
T 3u0g_A 110 VRENK-------LESCYLRPIIWIG 127 (328)
T ss_dssp HHHTT-------CSSEEEEEEEEEC
T ss_pred HHhcC-------CCCeEEEEEEEec
Confidence 99987 5789999999864
No 24
>2eiy_A ILVE, branched-chain amino acid aminotransferase; PLP-dependent enzyme; HET: PLP; 1.35A {Thermus thermophilus} PDB: 1wrv_A* 2ej0_A* 2ej2_A* 2ej3_A*
Probab=99.39 E-value=1.4e-14 Score=132.99 Aligned_cols=166 Identities=20% Similarity=0.317 Sum_probs=118.0
Q ss_pred HHhhccccccCC-CCceeeecccccccccccccccccCCCCceEEecccchHHHHHHHHHHcCCC-CCCHHHHHHHHHHH
Q psy16306 122 LIQIDQEWVPHT-TAASLYIRPTLIGTDLFEGMKAYRGVDGHIRMFRPEMNMDRMNQSALRAGLP-QFDPEEMIQCLNRL 199 (302)
Q Consensus 122 lv~~Ng~~vp~~-~~~s~yirp~~~g~~~~~g~~~~~~~~~~i~~f~~~~h~~Rl~~s~~~l~~~-~~~~e~l~~gi~~i 199 (302)
.+|.||.++|.+ ...++..|+++||+++||+++.+++.++. .+|++++|++||.+||+.++++ +++.+++.+.+..+
T Consensus 7 ~~~~nG~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~g~~g~-~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~ 85 (308)
T 2eiy_A 7 LIWMNGAFVPQEEAKTSVLSHALHYGTSVFEGIRAYETAKGP-AIFRLKEHVKRFYNSAKVLRMEIPFAPEELEEAIKEV 85 (308)
T ss_dssp SEEETTEEECGGGCCCCTTCHHHHHCCEEECCEEEECCTTSC-EEETHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHH
T ss_pred eEEECCEEeEhHHCccCccchHhhhcceEEEEEEEECCCCcc-cccCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 468899999975 58999999999999999999999887666 7999999999999999999999 78999999999999
Q ss_pred HHhcccccccCCCceeeecceeeccccccccccccCCCCccc----c----CCch--hhHHHHHHHHHHhCCC-CCC---
Q psy16306 200 IQIDQEWVPHTTAASLYIRPTLIGTDLFEGMKAYRGVDGHIR----M----FRPE--MNMDRMNRSALRAGLP-QFD--- 265 (302)
Q Consensus 200 i~~ng~~vp~~~~~s~ylr~~l~g~~~feG~r~~~~~~~~~~----i----f~~~--~h~~RL~~Sa~~r~~~-~~~--- 265 (302)
+..|+. .+.++|+.+++++...|..+......... + +... .++.|+..+.+.|..+ ...
T Consensus 86 ~~~~~~-------~~~~iR~~v~~g~~~~~~~p~~~~~~~~~i~~~p~~~~~~~~~~~~gv~l~~~~~~r~~~~~~~~~~ 158 (308)
T 2eiy_A 86 VRRNGY-------RSCYIRPLAWMGAKALGVNPLPNNPAEVMVAAWEWGAYLGEEAVRKGARLITSSWARFPANVMPGKA 158 (308)
T ss_dssp HHHTTC-------SSEEEEEEEECCSSCCSSCCGGGCSCEEEEEEEEC--------CCSCEEEEECSSCBCCTTTSCTTS
T ss_pred HHhCCC-------CcEEEEEEEEecCCccCcCCCCCCCeEEEEEEEEcCccCCcccccCCeEEEEecceecCCCCcCcce
Confidence 888763 26799999977765555443210010000 0 0011 1344555555544332 110
Q ss_pred --HH-HH----------HHHHHHHHHHc-CCccCCCCcccEEEE
Q psy16306 266 --PE-EM----------IQCLNRLIQID-QEWVPHTTAASLYIR 295 (302)
Q Consensus 266 --~~-~l----------~~~~~e~l~~n-~~~v~e~~~~n~yir 295 (302)
.. .+ .++++|+|..| +|+|+|++.+|+|+.
T Consensus 159 Kt~~ny~~~~la~~~A~~~G~de~l~ld~~G~V~Egs~sNif~v 202 (308)
T 2eiy_A 159 KVGGNYVNSALAKMEAVAAGADEALLLDEEGYVAEGSGENLFFV 202 (308)
T ss_dssp CBGGGHHHHHHHHHHHHHTTCSEEEEEBTTSSEEEESSCEEEEE
T ss_pred ehhhhHHHHHHHHHHHHHcCCCEEEEECCCCeEEEcCceEEEEE
Confidence 11 21 23445667777 799999999999985
No 25
>3lul_A 4-amino-4-deoxychorismate lyase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, pyridoxal phosphate; HET: MSE LLP; 1.78A {Legionella pneumophila}
Probab=99.36 E-value=2.5e-14 Score=129.24 Aligned_cols=159 Identities=18% Similarity=0.191 Sum_probs=108.6
Q ss_pred HHhhccccccCCCCceeeecccccccccccccccccCCCCceEEecccchHHHHHHHHHHcCCC-CCCHHHHHHHHHHHH
Q psy16306 122 LIQIDQEWVPHTTAASLYIRPTLIGTDLFEGMKAYRGVDGHIRMFRPEMNMDRMNQSALRAGLP-QFDPEEMIQCLNRLI 200 (302)
Q Consensus 122 lv~~Ng~~vp~~~~~s~yirp~~~g~~~~~g~~~~~~~~~~i~~f~~~~h~~Rl~~s~~~l~~~-~~~~e~l~~gi~~ii 200 (302)
+++.|| +.++..++.+|.++||+++||+++.+++ .+|++++|++||.+||+.++++ +++.+++.+.+..++
T Consensus 5 ~~~~nG---~~~a~i~~~d~g~~yG~gvFEtir~~~g-----~~~~l~~Hl~RL~~Sa~~l~i~~p~~~~~l~~~i~~l~ 76 (272)
T 3lul_A 5 RVIEDK---GDMTPSFGIDDRIFLGEGLFETIRVNSS-----KPSFAYMHWERLGNSARQLGIPFEISFDDWFEHLIQKI 76 (272)
T ss_dssp EECCCC---C--CCCCCTTBGGGGTCEEEEEEEEETT-----EESSHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHH
T ss_pred EEEECC---ccccccCCccchhhcceEeEEEEEEECC-----EeCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 467888 4456899999999999999999999988 7999999999999999999999 679999999999999
Q ss_pred HhcccccccCCCceeeecceeeccccccccccccCCCCcccc---CCchhhHHHHHHHHHHhC-------CC--CCCHHH
Q psy16306 201 QIDQEWVPHTTAASLYIRPTLIGTDLFEGMKAYRGVDGHIRM---FRPEMNMDRMNRSALRAG-------LP--QFDPEE 268 (302)
Q Consensus 201 ~~ng~~vp~~~~~s~ylr~~l~g~~~feG~r~~~~~~~~~~i---f~~~~h~~RL~~Sa~~r~-------~~--~~~~~~ 268 (302)
..|+. .+.++|+.++++....|+.+.....+...+ +.......|+..+.+.|. ++ ++....
T Consensus 77 ~~~~~-------~~~~irl~v~rg~~~~g~~~~~~~~~~~~~~~p~~~~~~~v~l~~~~~~r~~~~~~~~~Kt~nyl~~~ 149 (272)
T 3lul_A 77 QKDNL-------YHGGIKAILSGGPASRGLAERGQVSQLIFQTFNYSIQKHPVRLISINWLRDKANPLYQLKSVNYLEAI 149 (272)
T ss_dssp HHTTC-------SSEEEEEEEECCBCCSSTTCCCSSEEEEEEEECCCCCCSCEEEEEEEEEECTTCGGGGSCBSCCHHHH
T ss_pred HhcCC-------CCEEEEEEEEecCCccCcCCCCCCCcEEEEEECCCCccccEEEEEEeEEecCCCcccchhhhccHHHH
Confidence 88864 257888888665444444322110000000 110101133434444442 22 221111
Q ss_pred H------HHHHHHHHHHc-CCccCCCCcccEEEE
Q psy16306 269 M------IQCLNRLIQID-QEWVPHTTAASLYIR 295 (302)
Q Consensus 269 l------~~~~~e~l~~n-~~~v~e~~~~n~yir 295 (302)
+ .++++|+|..| +|+|+|++.+|+|+.
T Consensus 150 la~~~A~~~G~de~L~ld~~g~v~E~~~sNif~~ 183 (272)
T 3lul_A 150 IAQRQAIAVGADDALFFNTENHVTETTCANLFLI 183 (272)
T ss_dssp HHHHHHHHTTCSEEEEEETTSBEEEESSCEEEEE
T ss_pred HHHHHHHHcCCCEEEEECCCCeEEEcCCeEEEEE
Confidence 1 24456677787 799999999999886
No 26
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus}
Probab=99.31 E-value=9.9e-13 Score=112.80 Aligned_cols=68 Identities=16% Similarity=0.119 Sum_probs=61.2
Q ss_pred hcCCeeeeeeeeeecCCCceeecCcchhHHHHHHHH-HHcCCC-C--CCHHHHHHHHHHHHhhccccccCCCCceeeecc
Q psy16306 67 HYSVELFEGMKAYRGVDGHIRMFRPEMNMDRMNRSA-LRAGLP-Q--FDPEEMIQCLNRLIQIDQEWVPHTTAASLYIRP 142 (302)
Q Consensus 67 ~yG~~vfEg~r~y~~~~g~~~~Fr~~~H~~Rl~~S~-~~l~~~-~--~~~~~l~~~~~~lv~~Ng~~vp~~~~~s~yirp 142 (302)
+||+|||||||+|++ ++|++++|++||.+|| +.++|| + ++.+++.+++. ++..|+. .+.|+|+
T Consensus 2 ~~g~~vfEt~r~~~g-----~~~~l~~Hl~RL~~Sa~~~l~~~~~~~~~~~~~~~~i~-~~~~~~~-------~~~~iR~ 68 (194)
T 3ceb_A 2 MWQFPLFETILIEQG-----QAKNISYHQQRYEKSLLKFYPKMKLQPFDLAKIIAKHT-ALFTHRE-------GLIRCRI 68 (194)
T ss_dssp CTTCCEEEEEEEETT-----EECSHHHHHHHHHHHHHHHSTTCCCCCCCHHHHHHTCG-GGGSCSS-------SEEEEEE
T ss_pred CCCCeEEEEEEEECC-----EecCHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HHhhCCC-------CCEEEEE
Confidence 699999999999965 7999999999999999 999998 3 79999999988 8888764 7899999
Q ss_pred ccccc
Q psy16306 143 TLIGT 147 (302)
Q Consensus 143 ~~~g~ 147 (302)
+++++
T Consensus 69 ~~~~g 73 (194)
T 3ceb_A 69 DYNHH 73 (194)
T ss_dssp EECSS
T ss_pred EEeCC
Confidence 98876
No 27
>3daa_A D-amino acid aminotransferase; pyridoxal phosphate, transaminase; HET: PDD; 1.90A {Bacillus SP} SCOP: e.17.1.1 PDB: 4daa_A* 3lqs_A* 1daa_A* 2daa_A* 5daa_A* 1g2w_A* 1a0g_A* 2dab_A*
Probab=99.26 E-value=2.4e-12 Score=116.50 Aligned_cols=89 Identities=18% Similarity=0.233 Sum_probs=78.9
Q ss_pred HHHhcccccccCC-CceeeecceeeccccccccccccCCCCccccCCchhhHHHHHHHHHHhCCC-CCCHHHHHHHHHHH
Q psy16306 199 LIQIDQEWVPHTT-AASLYIRPTLIGTDLFEGMKAYRGVDGHIRMFRPEMNMDRMNRSALRAGLP-QFDPEEMIQCLNRL 276 (302)
Q Consensus 199 ii~~ng~~vp~~~-~~s~ylr~~l~g~~~feG~r~~~~~~~~~~if~~~~h~~RL~~Sa~~r~~~-~~~~~~l~~~~~e~ 276 (302)
++|.||+++|.++ ..++.+++++||+++|||+|+|+ +++|++++|+.||..|+..++++ +++.+++.+++.++
T Consensus 2 ~~~~nG~~~~~~~~~i~~~d~g~~yGdgvFEtir~~~-----g~~f~l~~Hl~RL~~Sa~~l~i~~~~~~~~l~~~i~~l 76 (277)
T 3daa_A 2 YTLWNDQIVKDEEVKIDKEDRGYQFGDGVYEVVKVYN-----GEMFTVNEHIDRLYASAEKIRITIPYTKDKFHQLLHEL 76 (277)
T ss_dssp EEEETTEEEEGGGCCBCTTBHHHHTCCEEEEEEEEET-----TEETTHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHH
T ss_pred EEEECCEEeEhHHCeechhhhHHhcccEEEEEEEEEC-----CEEcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 3689999999864 56789999999999999999996 48999999999999999999999 88999999999999
Q ss_pred HHHcCCccCCCCcccEEEEEEee
Q psy16306 277 IQIDQEWVPHTTAASLYIRPTLI 299 (302)
Q Consensus 277 l~~n~~~v~e~~~~n~yir~~~~ 299 (302)
+++|+ ..+.+||+.++
T Consensus 77 i~~n~-------~~~~~lri~vt 92 (277)
T 3daa_A 77 VEKNE-------LNTGHIYFQVT 92 (277)
T ss_dssp HHHHT-------CCSEEEEEEEE
T ss_pred HHhcC-------CCcEEEEEEEE
Confidence 99986 45667777665
No 28
>1iye_A Branched-chain amino acid aminotransferase; hexamer, PLP; HET: PGU; 1.82A {Escherichia coli} SCOP: e.17.1.1 PDB: 1i1l_A* 1i1m_A* 1iyd_A* 1i1k_A* 1a3g_A*
Probab=99.18 E-value=1.4e-11 Score=113.06 Aligned_cols=95 Identities=25% Similarity=0.417 Sum_probs=82.7
Q ss_pred HHHhcccccccCC-CceeeecceeeccccccccccccCCCCccccCCchhhHHHHHHHHHHhCCC-CCCHHHHHHHHHHH
Q psy16306 199 LIQIDQEWVPHTT-AASLYIRPTLIGTDLFEGMKAYRGVDGHIRMFRPEMNMDRMNRSALRAGLP-QFDPEEMIQCLNRL 276 (302)
Q Consensus 199 ii~~ng~~vp~~~-~~s~ylr~~l~g~~~feG~r~~~~~~~~~~if~~~~h~~RL~~Sa~~r~~~-~~~~~~l~~~~~e~ 276 (302)
++|.||+++|.++ ..++.+++++||+++|||+|+|+..+|. ++|++++|..||..|+..++++ +++.+++.+.+.++
T Consensus 8 ~~~~ng~~~~~~~~~i~~~d~g~~yG~gvFEtir~~~~~~G~-~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~~l~~~i~~~ 86 (309)
T 1iye_A 8 YIWFNGEMVRWEDAKVHVMSHALHYGTSVFEGIRCYDSHKGP-VVFRHREHMQRLHDSAKIYRFPVSQSIDELMEACRDV 86 (309)
T ss_dssp EEEETTEEEEGGGCCCCTTCHHHHHCCEEECCEEEECCTTSS-EEETHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHHH
T ss_pred eEEECCEEEEhHHcccCccchHHhccceeEEEEEEEECCCCc-EEcCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHH
Confidence 4789999999764 5677899999999999999999543332 7999999999999999999999 88999999999999
Q ss_pred HHHcCCccCCCCcccEEEEEEeeec
Q psy16306 277 IQIDQEWVPHTTAASLYIRPTLIGT 301 (302)
Q Consensus 277 l~~n~~~v~e~~~~n~yir~~~~~~ 301 (302)
+..|. ..+.|||+++++.
T Consensus 87 ~~~~~-------~~~~~iR~~v~~g 104 (309)
T 1iye_A 87 IRKNN-------LTSAYIRPLIFVG 104 (309)
T ss_dssp HHHTT-------CSSEEEEEEEEEC
T ss_pred HHhcC-------CCCEEEEEEEEeC
Confidence 99986 5689999999864
No 29
>3sno_A Hypothetical aminotransferase; D-aminoacid aminotransferase-like PLP-dependent enzymes, STR genomics; HET: MSE; 1.60A {Corynebacterium glutamicum}
Probab=99.15 E-value=2.2e-11 Score=112.07 Aligned_cols=90 Identities=16% Similarity=0.044 Sum_probs=78.9
Q ss_pred HHHhc---ccc--cccCC-CceeeecceeeccccccccccccCCCCccccCCchhhHHHHHHHHHHhCCCCCCHHHHHHH
Q psy16306 199 LIQID---QEW--VPHTT-AASLYIRPTLIGTDLFEGMKAYRGVDGHIRMFRPEMNMDRMNRSALRAGLPQFDPEEMIQC 272 (302)
Q Consensus 199 ii~~n---g~~--vp~~~-~~s~ylr~~l~g~~~feG~r~~~~~~~~~~if~~~~h~~RL~~Sa~~r~~~~~~~~~l~~~ 272 (302)
++|.| |++ +|.++ ..++.+++++||+++|||+|+|+ +++|.+++|+.||..|+..++++..+.+++.++
T Consensus 16 ~v~~n~~~G~~~~~~~~~a~i~~~Drg~~yGdgvFEtirv~~-----G~~~~l~~Hl~RL~~Sa~~L~i~~p~~~~l~~~ 90 (315)
T 3sno_A 16 ILIVEPYGGSIRQQNPNLPMVFWDDAALTRGDGIFETLLIRD-----GHACNVRRHGERFKASAALLGLPEPILEDWEKA 90 (315)
T ss_dssp EEEECSTTCCEEEECTTSCCCCTTBTTTTTCCEEEEEEEEET-----TEETTHHHHHHHHHHHHHHHTCCCCCHHHHHHH
T ss_pred EEEEECCCCeEEEeeHHHCcccccchHhhcCCEeEEEEEEEC-----CEECCHHHHHHHHHHHHHHhCCCCcCHHHHHHH
Confidence 68899 999 99875 56889999999999999999995 489999999999999999999993378899999
Q ss_pred HHHHHHH----cCCccCCCCcccEEEEEEeee
Q psy16306 273 LNRLIQI----DQEWVPHTTAASLYIRPTLIG 300 (302)
Q Consensus 273 ~~e~l~~----n~~~v~e~~~~n~yir~~~~~ 300 (302)
+.++++. |+ ..+.|||++++.
T Consensus 91 i~~~v~~~~~~n~-------~~~~~iRl~vtr 115 (315)
T 3sno_A 91 TQMGIESWYSHPN-------AGEASCTWTLSR 115 (315)
T ss_dssp HHHHHHHHHTC---------CCCEEEEEEEEC
T ss_pred HHHHHHhhcccCC-------CCCEEEEEEEEe
Confidence 9999998 44 568999999984
No 30
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti}
Probab=99.14 E-value=5.8e-11 Score=103.91 Aligned_cols=70 Identities=20% Similarity=0.301 Sum_probs=60.7
Q ss_pred hhcCCeeeeeeeeeecCCCceeecCcchhHHHHHHHHHHcCCCCCCHHHHHHHHHHHHhhccccccCCCCceeeeccccc
Q psy16306 66 LHYSVELFEGMKAYRGVDGHIRMFRPEMNMDRMNRSALRAGLPQFDPEEMIQCLNRLIQIDQEWVPHTTAASLYIRPTLI 145 (302)
Q Consensus 66 ~~yG~~vfEg~r~y~~~~g~~~~Fr~~~H~~Rl~~S~~~l~~~~~~~~~l~~~~~~lv~~Ng~~vp~~~~~s~yirp~~~ 145 (302)
-.-|+|||||||+|+ +| ++|++++|++||.+||+.|+|| ++.+++.+++.+++. |+. .+.|+|++++
T Consensus 12 ~~~g~glFEtir~~~--~G--~~~~l~~Hl~RL~~Sa~~l~~~-~~~~~l~~~i~~~~~-~~~-------~~~~iR~~~~ 78 (221)
T 3qqm_A 12 DTADFELIETMRWQP--GT--SFLRFDRHLARLYGSAAELGFA-CDPQRIAEVLSDALD-GAR-------TAMRTRLALA 78 (221)
T ss_dssp TTSCCEEEEEEEEET--TT--EETTHHHHHHHHHHHHHHHTCC-CCHHHHHHHHHHHHT-TCC-------SCEEEEEEEE
T ss_pred CCCCCEEEEEEEEec--CC--cCcCHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHh-cCC-------CCEEEEEEEE
Confidence 346899999999992 24 8999999999999999999998 689999999999987 543 6789999999
Q ss_pred ccc
Q psy16306 146 GTD 148 (302)
Q Consensus 146 g~~ 148 (302)
+++
T Consensus 79 ~~g 81 (221)
T 3qqm_A 79 RNG 81 (221)
T ss_dssp TTS
T ss_pred cCC
Confidence 865
No 31
>2zgi_A Putative 4-amino-4-deoxychorismate lyase; TTHA0621, PLP cofactor, pyridoxal enzyme, structural NPPSFA; HET: PLP PGE; 1.93A {Thermus thermophilus}
Probab=99.12 E-value=6.5e-13 Score=118.13 Aligned_cols=150 Identities=18% Similarity=0.156 Sum_probs=104.0
Q ss_pred HhhccccccCCCCceeeeccccc-ccccccccccccCCCCceEEecccchHHHHHHHHHHcCCC-CCCHHHHHHHHHHHH
Q psy16306 123 IQIDQEWVPHTTAASLYIRPTLI-GTDLFEGMKAYRGVDGHIRMFRPEMNMDRMNQSALRAGLP-QFDPEEMIQCLNRLI 200 (302)
Q Consensus 123 v~~Ng~~vp~~~~~s~yirp~~~-g~~~~~g~~~~~~~~~~i~~f~~~~h~~Rl~~s~~~l~~~-~~~~e~l~~gi~~ii 200 (302)
++.||..+ .++..|+++| |++.||+++.+++ .+|++++|++||.+||+.++++ +++ +++.+.+..++
T Consensus 2 ~~~nG~~~-----~~~~d~g~~y~G~gvFEtir~~~G-----~~~~l~~Hl~RL~~Sa~~l~~~~p~~-~~l~~~i~~~~ 70 (246)
T 2zgi_A 2 RLLNGTPL-----ALALPEAFLYHGASVFTTLRAEGG-----RPLWLEEHLARLRRHALALGLSYPGD-EAFLEDLEALL 70 (246)
T ss_dssp EEETTEEC-----CCSSCHHHHHSCCCEEEEEEEETT-----EETTHHHHHHHHHHHHHHTTCCCCCH-HHHHHHHHHHT
T ss_pred EEECCccc-----CCCccCcccccCeeEEEEEEEECC-----EeCCHHHHHHHHHHHHHHhCCCCCCH-HHHHHHHHHHH
Confidence 45688732 4788999999 9999999999988 7999999999999999999999 666 88999998887
Q ss_pred Hhc-ccccccCCCceeeecceeeccccccccccccCCCCccccCCchhhHHHHHHHHH-----HhCCC--CCCHHHH---
Q psy16306 201 QID-QEWVPHTTAASLYIRPTLIGTDLFEGMKAYRGVDGHIRMFRPEMNMDRMNRSAL-----RAGLP--QFDPEEM--- 269 (302)
Q Consensus 201 ~~n-g~~vp~~~~~s~ylr~~l~g~~~feG~r~~~~~~~~~~if~~~~h~~RL~~Sa~-----~r~~~--~~~~~~l--- 269 (302)
..| +. .+.++|+.+++++...|..++..+.+. ....+.++..+.+ ...++ ++....+
T Consensus 71 ~~~~~~-------~~~~vR~~v~~g~~~~~~~p~~~~~~~-----~~~~g~~l~~~~~r~~~~~~~~Kt~n~~~~~~a~~ 138 (246)
T 2zgi_A 71 RAFPKA-------PCLRLRFTVGEGVRLSEARPYAPLPLS-----LYREGVRVRLTGYRVHPDLARYKTGNYLPYRLALE 138 (246)
T ss_dssp TSCTTC-------SEEEEEEEEETTEEEEEEEECCCCCTH-----HHHHCBCEEEEEEECCTTTTTSCBSCCHHHHHHHH
T ss_pred HhcCCC-------CCEEEEEEEECCCCccCcCcCCCCchh-----HhhcCeEEEEecccCCCCCccchhhhhHHHHHHHH
Confidence 765 32 378999999877666666554321110 0011222222222 11233 2211111
Q ss_pred ---HHHHHHHHHHc-CCccCCCCcccEEEE
Q psy16306 270 ---IQCLNRLIQID-QEWVPHTTAASLYIR 295 (302)
Q Consensus 270 ---~~~~~e~l~~n-~~~v~e~~~~n~yir 295 (302)
.++++|+|..| +|+|+|++.+|+|+.
T Consensus 139 ~A~~~g~de~l~ld~~G~v~Egs~sNif~v 168 (246)
T 2zgi_A 139 EARKEGAFEGLLLDAFGHVVDGSRTSPLLF 168 (246)
T ss_dssp HHHTTTCSEEEEECTTSCEEEESSSEEEEE
T ss_pred HHHHcCCCEEEEECCCCCEEEcCCeEEEEE
Confidence 23456677787 799999999999985
No 32
>1i2k_A 4-amino-4-deoxychorismate lyase; pyridoxal phosphate, PABC; HET: PLP; 1.79A {Escherichia coli} SCOP: e.17.1.1 PDB: 1et0_A* 1i2l_A*
Probab=99.12 E-value=2.5e-12 Score=115.74 Aligned_cols=155 Identities=14% Similarity=0.167 Sum_probs=103.9
Q ss_pred HhhccccccCCCCceeeecccccccccccccccccCCCCceEEecccchHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHh
Q psy16306 123 IQIDQEWVPHTTAASLYIRPTLIGTDLFEGMKAYRGVDGHIRMFRPEMNMDRMNQSALRAGLPQFDPEEMIQCLNRLIQI 202 (302)
Q Consensus 123 v~~Ng~~vp~~~~~s~yirp~~~g~~~~~g~~~~~~~~~~i~~f~~~~h~~Rl~~s~~~l~~~~~~~e~l~~gi~~ii~~ 202 (302)
++.||. .++..++.+|+++||++.||+++.+++ .+|++++|++||.+||+.++++.++.+++.+.+..++..
T Consensus 2 ~~~nG~---~~~~i~~~d~g~~yG~gvfEtir~~~G-----~~~~l~~Hl~RL~~Sa~~l~~~~~~~~~l~~~i~~~~~~ 73 (269)
T 1i2k_A 2 FLINGH---KQESLAVSDRATQFGDGCFTTARVIDG-----KVSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAAE 73 (269)
T ss_dssp EEETTE---EESCCCTTCHHHHHCCEEEEEEEEETT-----EETTHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHH
T ss_pred EEECCC---cCCccCccccccccceeEEEEEEEECC-----EEecHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHh
Confidence 466776 234688999999999999999999988 799999999999999999999933899999999888764
Q ss_pred cccccccCCCceeeecceeeccccccccccccCCCCcc----ccCCc-----hhhHHHHHHHHHHhC-------CC--CC
Q psy16306 203 DQEWVPHTTAASLYIRPTLIGTDLFEGMKAYRGVDGHI----RMFRP-----EMNMDRMNRSALRAG-------LP--QF 264 (302)
Q Consensus 203 ng~~vp~~~~~s~ylr~~l~g~~~feG~r~~~~~~~~~----~if~~-----~~h~~RL~~Sa~~r~-------~~--~~ 264 (302)
+ .+.++|+.++++....|..+........ .++.. ...+.|+..+..++. ++ ++
T Consensus 74 ~---------~~~~iR~~v~~g~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~Kt~n~ 144 (269)
T 1i2k_A 74 Q---------QNGVLKVVISRGSGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSPVRLGRNPHLAGIKHLNR 144 (269)
T ss_dssp H---------CSEEEEEEEECCSCCSTTCCTTCCCCEEEEEEECCCSHHHHHHHHCEEEEECSCCBCCCTTTTBCCBSCC
T ss_pred C---------CCeEEEEEEEcCCCCCCCCCccCCCcEEEEEEEECCCcchhhhcCCeEEEEeceecCCCCcccCcchhhh
Confidence 3 1468888887654444543321111111 11111 012334444443332 22 11
Q ss_pred CHHHH-------HHHHHHHHHHc-CCccCCCCcccEEEE
Q psy16306 265 DPEEM-------IQCLNRLIQID-QEWVPHTTAASLYIR 295 (302)
Q Consensus 265 ~~~~l-------~~~~~e~l~~n-~~~v~e~~~~n~yir 295 (302)
.+.+ .++++|+|..| +|+|+|++.+|+|+.
T Consensus 145 -~~~~~a~~~A~~~G~de~l~ld~~G~v~E~s~sNif~v 182 (269)
T 1i2k_A 145 -LEQVLIRSHLEQTNADEALVLDSEGWVTECCAANLFWR 182 (269)
T ss_dssp -HHHHHHHHHHTTSSCSEEEEEBTTSBEEECSSSEEEEE
T ss_pred -HHHHHHHHHHHHCCCCEEEEECCCCcEEEcCceEEEEE
Confidence 1222 13455667777 799999999999985
No 33
>2xpf_A 4-amino-4-deoxychorismate lyase; para-aminobenzoic acid, folate biosynthesis; HET: PLP PG4; 1.75A {Pseudomonas aeruginosa} PDB: 2y4r_A* 2xpf_B*
Probab=99.03 E-value=4.4e-12 Score=115.59 Aligned_cols=158 Identities=15% Similarity=0.055 Sum_probs=105.1
Q ss_pred HHHHhhccccccCCCCceeeecccccccccccccccccCCCCceEEecccchHHHHHHHHHHcCCCCCCHHHHHHHHHHH
Q psy16306 120 NRLIQIDQEWVPHTTAASLYIRPTLIGTDLFEGMKAYRGVDGHIRMFRPEMNMDRMNQSALRAGLPQFDPEEMIQCLNRL 199 (302)
Q Consensus 120 ~~lv~~Ng~~vp~~~~~s~yirp~~~g~~~~~g~~~~~~~~~~i~~f~~~~h~~Rl~~s~~~l~~~~~~~e~l~~gi~~i 199 (302)
.++++.||.++ ...++..|+++||+++||+++.+++ .+|++++|++||.+||+.++++. +.+++.+.+..+
T Consensus 21 ~m~~~~nG~~~---~~i~~~d~g~~yGdgvFEtir~~~G-----~~~~l~~Hl~RL~~Sa~~l~~~~-~~~~l~~~i~~~ 91 (292)
T 2xpf_A 21 HMLDWVDGRPA---AELSVRDRGLAYGDGLFETLAVRAG-----TPRLLERHLARLEEGCRRLAIPL-DTAALRQELLAF 91 (292)
T ss_dssp --CEEETTEEC---SEEETTBHHHHHCCEEEEEEEEETT-----EETTHHHHHHHHHHHHHHTTCCC-CHHHHHHHHHHH
T ss_pred ccEEEECCEEE---EEEcccchhhhcCcEeEEEEEEECC-----EECCHHHHHHHHHHHHHhcCCCC-CHHHHHHHHHHH
Confidence 34689999987 4588899999999999999999988 79999999999999999999994 378888888887
Q ss_pred HHhcccccccCCCceeeecceeeccccccccccccCCCCcc----ccCCc---h--hhHHHHHHHHHHhCC-------C-
Q psy16306 200 IQIDQEWVPHTTAASLYIRPTLIGTDLFEGMKAYRGVDGHI----RMFRP---E--MNMDRMNRSALRAGL-------P- 262 (302)
Q Consensus 200 i~~ng~~vp~~~~~s~ylr~~l~g~~~feG~r~~~~~~~~~----~if~~---~--~h~~RL~~Sa~~r~~-------~- 262 (302)
+..+. ..++|+.++++....|..+........ .++.. + ..+.|+..+.+++.. +
T Consensus 92 v~~~~---------~~~iR~~v~rg~~~~g~~p~~~~~~~~~i~~~p~~~~~~~~~~~gv~l~~~~~~~~~~~~~~~~Kt 162 (292)
T 2xpf_A 92 CAALG---------DGVAKLIVTRGEGLRGYAPPAEASPRRILSGSPRPAYPERHWQQGVRLFACRTRLAEQPLLAGLKH 162 (292)
T ss_dssp HHHHC---------SEEEEEEEECCBCCSSSSCCTTCCCEEEEEEECCCCCCHHHHHTCEEEEECCCCBCCCTTTTBCCB
T ss_pred HHhCC---------CcEEEEEEEecCCCCCCCCCCCCCcEEEEEEEECCccchhhccCCeEEEEeeeeccCCCCCCCcch
Confidence 76521 458888886543344543321111100 01110 0 123344444443322 2
Q ss_pred -CCCHHHH------HHHHHHHHHHc-CCccCCCCcccEEEE
Q psy16306 263 -QFDPEEM------IQCLNRLIQID-QEWVPHTTAASLYIR 295 (302)
Q Consensus 263 -~~~~~~l------~~~~~e~l~~n-~~~v~e~~~~n~yir 295 (302)
++....+ .++++|+|..| +|+|+|++.+|+|+.
T Consensus 163 ~ny~~~~la~~~A~~~G~de~L~ld~~G~V~Egs~sNif~v 203 (292)
T 2xpf_A 163 LNRLEQVLARAEWSDAGHAEGLMLDVHERVVEGVFSNLLLV 203 (292)
T ss_dssp SCCHHHHHHHTTCCCTTCSEEEEEBTTCCEEEESSSEEEEE
T ss_pred hhhHHHHHHHHHHHHcCCCEEEEECCCCCEEEcCCeEEEEE
Confidence 1111111 24567788888 899999999999985
No 34
>3csw_A BCAT, putative branched-chain-amino-acid aminotransfera; TM0831, putative branched-chain amino acid aminotransferase; HET: PLP CIT; 2.15A {Thermotoga maritima MSB8}
Probab=98.51 E-value=3.2e-08 Score=89.66 Aligned_cols=85 Identities=18% Similarity=0.195 Sum_probs=70.7
Q ss_pred HHhcccccccCC-CceeeecceeeccccccccccccCCCCccccCCchhhHHHHHHHHHHhCCC-CCCHHHHHHHHHHHH
Q psy16306 200 IQIDQEWVPHTT-AASLYIRPTLIGTDLFEGMKAYRGVDGHIRMFRPEMNMDRMNRSALRAGLP-QFDPEEMIQCLNRLI 277 (302)
Q Consensus 200 i~~ng~~vp~~~-~~s~ylr~~l~g~~~feG~r~~~~~~~~~~if~~~~h~~RL~~Sa~~r~~~-~~~~~~l~~~~~e~l 277 (302)
-|.++++++... ..++.++++ |+++|||+|+|+ +++|.+++|..||..|+..++++ +++.+++.+.+.+++
T Consensus 17 ~~~~~~~~~~~~~~i~~~d~g~--G~gvFEtir~~~-----G~~~~l~~Hl~RL~~Sa~~l~~~~p~~~~~l~~~i~~~~ 89 (285)
T 3csw_A 17 WRGKFRRADEISLDFSLFEKSL--QGAVYETLRTYS-----RAPFAAYKHYTRLKRSADFFNLPLSLSFDEFTKVLKAGA 89 (285)
T ss_dssp ETTEEEESSEEEEEHHHHHHHT--TCCEEEEEEEET-----TEETTHHHHHHHHHHHHHTTTCCCSSCHHHHHHHHHHHH
T ss_pred EccCceEcccccCEeCCccccc--ceeeEEEEEEEC-----CEECCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHH
Confidence 356778887543 456677777 999999999995 48999999999999999999999 889999999999998
Q ss_pred HHcCCccCCCCcccEEEEEEee
Q psy16306 278 QIDQEWVPHTTAASLYIRPTLI 299 (302)
Q Consensus 278 ~~n~~~v~e~~~~n~yir~~~~ 299 (302)
..|. .+.|||+++.
T Consensus 90 ~~~~--------~~~~iR~~v~ 103 (285)
T 3csw_A 90 DEFK--------QEVRIKVYLF 103 (285)
T ss_dssp TTCS--------SCEEEEEEEC
T ss_pred HhhC--------CCeEEEEEEE
Confidence 8763 2579999874
No 35
>3ceb_A D-aminoacid aminotransferase-like PLP-dependent E; joint center for structural genomics, protein structure initiative, PSI-2, lyase; HET: LLP; 2.40A {Haemophilus somnus}
Probab=98.29 E-value=3e-07 Score=78.43 Aligned_cols=67 Identities=13% Similarity=0.022 Sum_probs=57.0
Q ss_pred eeccccccccccccCCCCccccCCchhhHHHHHHHH-HHhCCC-C--CCHHHHHHHHHHHHHHcCCccCCCCcccEEEEE
Q psy16306 221 LIGTDLFEGMKAYRGVDGHIRMFRPEMNMDRMNRSA-LRAGLP-Q--FDPEEMIQCLNRLIQIDQEWVPHTTAASLYIRP 296 (302)
Q Consensus 221 l~g~~~feG~r~~~~~~~~~~if~~~~h~~RL~~Sa-~~r~~~-~--~~~~~l~~~~~e~l~~n~~~v~e~~~~n~yir~ 296 (302)
+||.++|||+|+++ +++|.+++|..||..|+ ..++++ + ++.+++.+.+. ++.+|. ..++|||+
T Consensus 2 ~~g~~vfEt~r~~~-----g~~~~l~~Hl~RL~~Sa~~~l~~~~~~~~~~~~~~~~i~-~~~~~~-------~~~~~iR~ 68 (194)
T 3ceb_A 2 MWQFPLFETILIEQ-----GQAKNISYHQQRYEKSLLKFYPKMKLQPFDLAKIIAKHT-ALFTHR-------EGLIRCRI 68 (194)
T ss_dssp CTTCCEEEEEEEET-----TEECSHHHHHHHHHHHHHHHSTTCCCCCCCHHHHHHTCG-GGGSCS-------SSEEEEEE
T ss_pred CCCCeEEEEEEEEC-----CEecCHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH-HHhhCC-------CCCEEEEE
Confidence 58999999999995 47999999999999999 999998 3 67888887777 777765 46899999
Q ss_pred Eeee
Q psy16306 297 TLIG 300 (302)
Q Consensus 297 ~~~~ 300 (302)
+++.
T Consensus 69 ~~~~ 72 (194)
T 3ceb_A 69 DYNH 72 (194)
T ss_dssp EECS
T ss_pred EEeC
Confidence 9874
No 36
>3qqm_A MLR3007 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, transferase; HET: LLP; 2.30A {Mesorhizobium loti}
Probab=98.10 E-value=3.7e-06 Score=73.20 Aligned_cols=66 Identities=20% Similarity=0.324 Sum_probs=56.1
Q ss_pred eccccccccccccCCCCccccCCchhhHHHHHHHHHHhCCCCCCHHHHHHHHHHHHHHcCCccCCCCcccEEEEEEeee
Q psy16306 222 IGTDLFEGMKAYRGVDGHIRMFRPEMNMDRMNRSALRAGLPQFDPEEMIQCLNRLIQIDQEWVPHTTAASLYIRPTLIG 300 (302)
Q Consensus 222 ~g~~~feG~r~~~~~~~~~~if~~~~h~~RL~~Sa~~r~~~~~~~~~l~~~~~e~l~~n~~~v~e~~~~n~yir~~~~~ 300 (302)
-|.++|||+|+++ + +++|.+++|.+||..|+..++++ ++.+++.+.+.+++. |. ..+.|||++++.
T Consensus 14 ~g~glFEtir~~~--~--G~~~~l~~Hl~RL~~Sa~~l~~~-~~~~~l~~~i~~~~~-~~-------~~~~~iR~~~~~ 79 (221)
T 3qqm_A 14 ADFELIETMRWQP--G--TSFLRFDRHLARLYGSAAELGFA-CDPQRIAEVLSDALD-GA-------RTAMRTRLALAR 79 (221)
T ss_dssp SCCEEEEEEEEET--T--TEETTHHHHHHHHHHHHHHHTCC-CCHHHHHHHHHHHHT-TC-------CSCEEEEEEEET
T ss_pred CCCEEEEEEEEec--C--CcCcCHHHHHHHHHHHHHHcCCC-CCHHHHHHHHHHHHh-cC-------CCCEEEEEEEEc
Confidence 5779999999993 1 48899999999999999999997 467899999999887 53 457899999875
No 37
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=30.53 E-value=50 Score=22.20 Aligned_cols=30 Identities=10% Similarity=0.274 Sum_probs=26.0
Q ss_pred HHHHHHcCCC-C---CCHHHHHHHHHHHHhhccc
Q psy16306 99 NRSALRAGLP-Q---FDPEEMIQCLNRLIQIDQE 128 (302)
Q Consensus 99 ~~S~~~l~~~-~---~~~~~l~~~~~~lv~~Ng~ 128 (302)
...++.|++. . .+.+++.+.-+.++..|..
T Consensus 4 ~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhP 37 (65)
T 2guz_B 4 DESCKILNIEESKGDLNMDKINNRFNYLFEVNDK 37 (65)
T ss_dssp HHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCG
T ss_pred HHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCC
Confidence 4567889998 6 7999999999999999974
Done!