BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16309
(271 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8R4F0|MCLN3_MOUSE Mucolipin-3 OS=Mus musculus GN=Mcoln3 PE=1 SV=1
Length = 553
Score = 87.8 bits (216), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 77/147 (52%), Gaps = 1/147 (0%)
Query: 113 KVGMGIEFSRFVKAELKISLKTVNFKAAGPISPPDCYQFDITINLDNSDMDGQVLISLDT 172
K+ + ++F R + EL+ LK +N + PDCY F +TI DN G++ ISLD
Sbjct: 203 KLNLSLDFHRLLTVELQFKLKAINLQTVRHQELPDCYDFTLTITFDNKAHSGRIKISLDN 262
Query: 173 EPTRLACKGDVKYYDNNRLDFILRSLLNLLVITVCCTSFILCTRAIWRAQLLKYETINFF 232
+ + CK D + + + + + VI C S +LC R++ R L+ E +NFF
Sbjct: 263 DISIKECK-DWHVSGSIQKNTHYMMIFDAFVILTCLASLVLCARSVIRGLQLQQEFVNFF 321
Query: 233 QEKFNKKLSMEGRLEFLNLWYDAVPLS 259
+ K++S ++EF+N WY + +S
Sbjct: 322 LLHYKKEVSASDQMEFINGWYIMIIIS 348
>sp|Q8TDD5|MCLN3_HUMAN Mucolipin-3 OS=Homo sapiens GN=MCOLN3 PE=2 SV=1
Length = 553
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 75/141 (53%), Gaps = 1/141 (0%)
Query: 113 KVGMGIEFSRFVKAELKISLKTVNFKAAGPISPPDCYQFDITINLDNSDMDGQVLISLDT 172
K+ + ++F R + EL+ LK +N + PDCY F +TI DN G++ ISLD
Sbjct: 203 KLNLTLDFHRLLTVELQFKLKAINLQTVRHQELPDCYDFTLTITFDNKAHSGRIKISLDN 262
Query: 173 EPTRLACKGDVKYYDNNRLDFILRSLLNLLVITVCCTSFILCTRAIWRAQLLKYETINFF 232
+ + CK D + + + + + VI C S ILC R++ R L+ E +NFF
Sbjct: 263 DISIRECK-DWHVSGSIQKNTHYMMIFDAFVILTCLVSLILCIRSVIRGLQLQQEFVNFF 321
Query: 233 QEKFNKKLSMEGRLEFLNLWY 253
+ K++S+ ++EF+N WY
Sbjct: 322 LLHYKKEVSVSDQMEFVNGWY 342
>sp|Q8K595|MCLN2_MOUSE Mucolipin-2 OS=Mus musculus GN=Mcoln2 PE=2 SV=1
Length = 566
Score = 84.0 bits (206), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 78/143 (54%), Gaps = 3/143 (2%)
Query: 118 IEFSRFVKAELKISLKTVNFKAAGPISPPDCYQFDITINLDNSDMDGQVLISLDTEPTRL 177
++F R V+ ++ +LK ++ +A PDCY F TI DN+ G++ I L++E
Sbjct: 213 LDFYRLVQVDISFALKGIDLQAVHSREIPDCYLFQNTITFDNTAHSGKIKIYLNSEANIE 272
Query: 178 ACKG-DVKYYDNNRLDFILRSLLNLLVITVCCTSFILCTRAIWRAQLLKYETINFFQEKF 236
CK ++ ++L + ++ VI +C S ILCTR+I A L+ +NFF EK+
Sbjct: 273 ECKNMNISGSTQRSTHYLL--VFDVFVIMICLASLILCTRSIVLALRLRKRFLNFFLEKY 330
Query: 237 NKKLSMEGRLEFLNLWYDAVPLS 259
+++ + EF+N WY V +S
Sbjct: 331 KQRVCGADQWEFVNGWYVLVTIS 353
>sp|Q60HE8|MCLN1_MACFA Mucolipin-1 OS=Macaca fascicularis GN=MCOLN1 PE=2 SV=1
Length = 580
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 116 MGIEFSRFVKAELKISLKTVNFKAAGPISPPDCYQFDITINLDNSDMDGQVLISLDTEPT 175
+ ++F + V + LKT+N ++ PDCY F + I DN G++ ISL+T+
Sbjct: 221 LTLKFHKLVNVTIHFRLKTINLQSLINNEIPDCYTFSVLITFDNKAHSGRIPISLETQAH 280
Query: 176 RLACKGD--VKYYDNNRLDFILRSLLNLLVITVCCTSFILCTRAIWRAQLLKYETINFFQ 233
CK ++ DN+ R L +++VI C SF+LC R++ R LL+ E + F
Sbjct: 281 IQECKHPSVFRHGDNS-----FRLLFDVVVILTCSLSFLLCARSLLRGFLLQNEFVRFMW 335
Query: 234 EKFNKKLSMEGRLEFLNLWY 253
+ + +S+ RLEF+N WY
Sbjct: 336 RQRRRVISLWERLEFVNGWY 355
>sp|Q9GZU1|MCLN1_HUMAN Mucolipin-1 OS=Homo sapiens GN=MCOLN1 PE=1 SV=1
Length = 580
Score = 82.8 bits (203), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 116 MGIEFSRFVKAELKISLKTVNFKAAGPISPPDCYQFDITINLDNSDMDGQVLISLDTEPT 175
+ ++F + V + LKT+N ++ PDCY F + I DN G++ ISL+T+
Sbjct: 221 LTLKFHKLVNVTIHFRLKTINLQSLINNEIPDCYTFSVLITFDNKAHSGRIPISLETQAH 280
Query: 176 RLACKGD--VKYYDNNRLDFILRSLLNLLVITVCCTSFILCTRAIWRAQLLKYETINFFQ 233
CK ++ DN+ R L +++VI C SF+LC R++ R LL+ E + F
Sbjct: 281 IQECKHPSVFQHGDNS-----FRLLFDVVVILTCSLSFLLCARSLLRGFLLQNEFVGFMW 335
Query: 234 EKFNKKLSMEGRLEFLNLWY 253
+ + +S+ RLEF+N WY
Sbjct: 336 RQRGRVISLWERLEFVNGWY 355
>sp|Q99J21|MCLN1_MOUSE Mucolipin-1 OS=Mus musculus GN=Mcoln1 PE=1 SV=1
Length = 580
Score = 81.3 bits (199), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 5/139 (3%)
Query: 116 MGIEFSRFVKAELKISLKTVNFKAAGPISPPDCYQFDITINLDNSDMDGQVLISLDTEPT 175
+ ++F + + + LKT+N ++ PDCY F I I DN G++ I L+T+
Sbjct: 221 LTLKFHKLINVTIHFQLKTINLQSLINNEIPDCYTFSILITFDNKAHSGRIPIRLETKTH 280
Query: 176 RLACKG-DVKYYDNNRLDFILRSLLNLLVITVCCTSFILCTRAIWRAQLLKYETINFFQE 234
CK V + +N R L +++VI C SF+LC R++ R LL+ E + F
Sbjct: 281 IQECKHPSVSRHGDNSF----RLLFDVVVILTCSLSFLLCARSLLRGFLLQNEFVVFMWR 336
Query: 235 KFNKKLSMEGRLEFLNLWY 253
+ +++S+ RLEF+N WY
Sbjct: 337 RRGREISLWERLEFVNGWY 355
>sp|Q8IZK6|MCLN2_HUMAN Mucolipin-2 OS=Homo sapiens GN=MCOLN2 PE=2 SV=2
Length = 566
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 73/142 (51%), Gaps = 1/142 (0%)
Query: 118 IEFSRFVKAELKISLKTVNFKAAGPISPPDCYQFDITINLDNSDMDGQVLISLDTEPTRL 177
+EF R ++ E+ LK ++ + PDCY F TI DN G++ I D++
Sbjct: 213 LEFYRLLQVEISFHLKGIDLQTIHSRELPDCYVFQNTIIFDNKAHSGKIKIYFDSDAKIE 272
Query: 178 ACKGDVKYYDNNRLDFILRSLLNLLVITVCCTSFILCTRAIWRAQLLKYETINFFQEKFN 237
CK D+ + + + + + + VI +C S ILCTR+I A L+ +NFF EK+
Sbjct: 273 ECK-DLNIFGSTQKNAQYVLVFDAFVIVICLASLILCTRSIVLALRLRKRFLNFFLEKYK 331
Query: 238 KKLSMEGRLEFLNLWYDAVPLS 259
+ + + EF+N WY V +S
Sbjct: 332 RPVCDTDQWEFINGWYVLVIIS 353
>sp|Q6DRM0|WRB_DANRE Tail-anchored protein insertion receptor WRB OS=Danio rerio GN=wrb
PE=2 SV=1
Length = 170
Score = 31.6 bits (70), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 5/108 (4%)
Query: 68 FLKVGSEFLTNAQRKFCTHFDFPPSS-----PDLRMRARTKGYDSKTELEKVGMGIEFSR 122
FL + S FL N + F S D M RT+ + K EL + M EF+R
Sbjct: 8 FLVLSSVFLCNLVKTFLPSISSFLSKIFHKDADQEMEMRTEIQNMKMELSTISMMDEFAR 67
Query: 123 FVKAELKISLKTVNFKAAGPISPPDCYQFDITINLDNSDMDGQVLISL 170
+ + E KI+ T K + +N+ + ++ISL
Sbjct: 68 YARLERKINKMTDQLKTLVKSRTAQQAKMKWIVNIAFYILQAALMISL 115
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.139 0.435
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 98,647,880
Number of Sequences: 539616
Number of extensions: 3737197
Number of successful extensions: 9678
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 9664
Number of HSP's gapped (non-prelim): 10
length of query: 271
length of database: 191,569,459
effective HSP length: 116
effective length of query: 155
effective length of database: 128,974,003
effective search space: 19990970465
effective search space used: 19990970465
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)