Query psy16309
Match_columns 271
No_of_seqs 109 out of 129
Neff 4.3
Searched_HMMs 46136
Date Fri Aug 16 18:01:26 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16309.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16309hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3733|consensus 100.0 2.8E-60 6.1E-65 457.0 5.5 229 19-267 127-357 (566)
2 KOG3733|consensus 98.8 3.2E-09 6.9E-14 104.4 2.7 137 16-180 139-275 (566)
3 PF11116 DUF2624: Protein of u 28.9 13 0.00029 29.7 -0.8 44 30-80 11-54 (85)
4 PHA03164 hypothetical protein; 28.2 12 0.00026 29.8 -1.1 55 161-217 19-76 (88)
5 PLN02701 alpha-mannosidase 24.7 31 0.00067 38.4 0.7 20 239-261 110-129 (1050)
6 PF05304 DUF728: Protein of un 23.8 31 0.00068 28.3 0.4 27 240-266 34-61 (103)
7 KOG0623|consensus 21.7 44 0.00095 33.7 1.1 16 58-73 268-283 (541)
8 cd01755 PLAT_lipase PLAT/ LH2 19.1 1.4E+02 0.003 24.4 3.4 26 149-174 1-29 (120)
9 cd01758 PLAT_LPL PLAT/ LH2 dom 16.5 1.7E+02 0.0037 24.8 3.4 25 149-173 1-29 (137)
10 cd01759 PLAT_PL PLAT/LH2 domai 16.3 1.7E+02 0.0036 24.2 3.2 22 150-171 2-24 (113)
No 1
>KOG3733|consensus
Probab=100.00 E-value=2.8e-60 Score=457.02 Aligned_cols=229 Identities=34% Similarity=0.610 Sum_probs=212.9
Q ss_pred CceEEEEEEEEEeecccccccchhhhHHHHHhhhcCCCCCccchhhHHhhhhhcccccCccccccccccccCCCCCCcce
Q psy16309 19 NGIFHFQVQYFVITCRSLLKLISLSSELNELLLQCSHGPLNIELSLWWHFLKVGSEFLTNAQRKFCTHFDFPPSSPDLRM 98 (271)
Q Consensus 19 ~~~~~~~~~y~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~~~pL~lCq~~Yk~g~I~p~NdT~~~~~~f~iDp~i~tdCi 98 (271)
|-++|+..||-+++.- +|. ++|| -.|.+++||.+||++||||+|+|.||| |+|||+++|+|.
T Consensus 127 d~~~yav~~Y~~~~~~-~g~-----yay~------~~~~t~~~L~lcq~~y~rg~i~~~ndt------~~~dp~i~t~c~ 188 (566)
T KOG3733|consen 127 DTVQYAVNQYLNLSRV-IGP-----YAYP------TPGTTMSPLALCQQNYRRGTIFPFNDT------FDIDPHIDTVCE 188 (566)
T ss_pred chHHHHHHHHhccccc-ccc-----cccc------CCCCCcchhhhhhhhhcccceeccccc------cccCCCCCccee
Confidence 5578999999999998 999 9999 666889999999999999999999999 999999999999
Q ss_pred EeccCCC--CChhhhhhcCCceeeceeeeeEEEEEEeeeeeecCCCCCCCceEEEEEEEEEeCCCCCeeEEEEEeccccc
Q psy16309 99 RARTKGY--DSKTELEKVGMGIEFSRFVKAELKISLKTVNFKAAGPISPPDCYQFDITINLDNSDMDGQVLISLDTEPTR 176 (271)
Q Consensus 99 ~i~p~~~--~~~~~l~~~nftl~F~rLI~vtI~F~LKtInLqti~~~e~PDCY~F~ItI~FDNkaHSGqIkI~Ld~e~~i 176 (271)
.++|+.. ..++.+.+.|.+++|++|++++|+|+||+||+|+.++.|.||||+|+|+|+|||+||||||+++|++++++
T Consensus 189 ~~~pne~~~~~e~~~~~~~~t~~F~~lv~~~L~fkiktin~~~~~~~~~pdc~~f~v~itf~nk~h~g~~~isl~~~~s~ 268 (566)
T KOG3733|consen 189 RVPPNETTIGVENYLRQRNLTLNFHSLVSVQLTFKLKTINLQANGGLEAPDCYRFDISITFDNKAHSGRILISLDAEATI 268 (566)
T ss_pred ecCCCccccccccCccccchhhHHHHHhhheeEEEEEeeeeccccCcCCCccCceEEEEEeeccccccccceeechHHHH
Confidence 9999632 34445578999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCccccCCcccceeeeeecceeeeehhhhhhhhhhhhHHHHHhhhHHHHHHhHHhcCCCCCcccccccccceEEEe
Q psy16309 177 LACKGDVKYYDNNRLDFILRSLLNLLVITVCCTSFILCTRAIWRAQLLKYETINFFQEKFNKKLSMEGRLEFLNLWYDAV 256 (271)
Q Consensus 177 ~eCkg~~~~~~~~~~~~~~~~~fD~~VIliCi~SliLC~RSIirg~~L~ke~~~FF~~~~~k~Ls~sdrlEFvNgWYILI 256 (271)
.||||+..+ ..+..++.++.+||++||++|++|++||+||++||++||.|++.||+.++||++|.+||+||+|||||||
T Consensus 269 ~ec~~~~~~-~~~~~d~~~r~v~~~~viltc~ls~~Lc~rsl~r~~~Lq~~~v~f~~~~~~~~~s~~~rlefvn~wyi~i 347 (566)
T KOG3733|consen 269 LECKGAHFS-SDANFDSMLRSVFDIFVILTCALSFALCTRSLWRGYLLQCEFVNFFRSQFGKELSFDGRLEFVNGWYIMI 347 (566)
T ss_pred hhhhcCccc-cccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccceeEEeeeeEEe
Confidence 999998543 4455688999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeehhhHhhhc
Q psy16309 257 PLSFCVQELYG 267 (271)
Q Consensus 257 IISDiL~~~~~ 267 (271)
|+||+++ +-|
T Consensus 348 i~~dvl~-i~g 357 (566)
T KOG3733|consen 348 IFSDVLT-IIG 357 (566)
T ss_pred eehhHHH-HHH
Confidence 9999998 544
No 2
>KOG3733|consensus
Probab=98.76 E-value=3.2e-09 Score=104.44 Aligned_cols=137 Identities=9% Similarity=-0.197 Sum_probs=119.4
Q ss_pred EccCceEEEEEEEEEeecccccccchhhhHHHHHhhhcCCCCCccchhhHHhhhhhcccccCccccccccccccCCCCCC
Q psy16309 16 VSANGIFHFQVQYFVITCRSLLKLISLSSELNELLLQCSHGPLNIELSLWWHFLKVGSEFLTNAQRKFCTHFDFPPSSPD 95 (271)
Q Consensus 16 ~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~~~pL~lCq~~Yk~g~I~p~NdT~~~~~~f~iDp~i~t 95 (271)
+++-.++|+.+||. ++++. |+.|.|+.++..+..|.+.|+.|...|+|.+ .++|+++-+
T Consensus 139 ~~~~~g~yay~~~~----~t~~~-----------L~lcq~~y~rg~i~~~ndt~~~dp~i~t~c~------~~~pne~~~ 197 (566)
T KOG3733|consen 139 LSRVIGPYAYPTPG----TTMSP-----------LALCQQNYRRGTIFPFNDTFDIDPHIDTVCE------RVPPNETTI 197 (566)
T ss_pred cccccccccccCCC----CCcch-----------hhhhhhhhcccceeccccccccCCCCCccee------ecCCCcccc
Confidence 44558899999987 77777 8888888999999999999999999999999 999988832
Q ss_pred cceEeccCCCCChhhhhhcCCceeeceeeeeEEEEEEeeeeeecCCCCCCCceEEEEEEEEEeCCCCCeeEEEEEecccc
Q psy16309 96 LRMRARTKGYDSKTELEKVGMGIEFSRFVKAELKISLKTVNFKAAGPISPPDCYQFDITINLDNSDMDGQVLISLDTEPT 175 (271)
Q Consensus 96 dCi~i~p~~~~~~~~l~~~nftl~F~rLI~vtI~F~LKtInLqti~~~e~PDCY~F~ItI~FDNkaHSGqIkI~Ld~e~~ 175 (271)
.+.+. +.+.-.+.+|...|++++.++|++-.+.++++ +...|.||||.+.-++.+||++|+|+.++.-++..+
T Consensus 198 ---~~e~~---~~~~~~t~~F~~lv~~~L~fkiktin~~~~~~-~~~pdc~~f~v~itf~nk~h~g~~~isl~~~~s~~e 270 (566)
T KOG3733|consen 198 ---GVENY---LRQRNLTLNFHSLVSVQLTFKLKTINLQANGG-LEAPDCYRFDISITFDNKAHSGRILISLDAEATILE 270 (566)
T ss_pred ---ccccC---ccccchhhHHHHHhhheeEEEEEeeeeccccC-cCCCccCceEEEEEeeccccccccceeechHHHHhh
Confidence 22221 11111568999999999999999999999999 999999999999999999999999999999999999
Q ss_pred ccccc
Q psy16309 176 RLACK 180 (271)
Q Consensus 176 i~eCk 180 (271)
..+|+
T Consensus 271 c~~~~ 275 (566)
T KOG3733|consen 271 CKGAH 275 (566)
T ss_pred hhcCc
Confidence 99998
No 3
>PF11116 DUF2624: Protein of unknown function (DUF2624); InterPro: IPR020277 This entry contains proteins with no known function.
Probab=28.85 E-value=13 Score=29.69 Aligned_cols=44 Identities=14% Similarity=0.058 Sum_probs=32.5
Q ss_pred EeecccccccchhhhHHHHHhhhcCCCCCccchhhHHhhhhhcccccCccc
Q psy16309 30 VITCRSLLKLISLSSELNELLLQCSHGPLNIELSLWWHFLKVGSEFLTNAQ 80 (271)
Q Consensus 30 ~~~~~~~~~~~~~~~~~n~~l~~~~~~~~~~pL~lCq~~Yk~g~I~p~NdT 80 (271)
+|+++|...|+.+|.+||..+-.. -...=..+-|.-.++++|+.
T Consensus 11 Kln~iT~~eLlkyskqy~i~it~~-------QA~~I~~~lr~k~inIfn~~ 54 (85)
T PF11116_consen 11 KLNNITAKELLKYSKQYNISITKK-------QAEQIANILRGKNINIFNEQ 54 (85)
T ss_pred HHhcCCHHHHHHHHHHhCCCCCHH-------HHHHHHHHHhcCCCCCCCHH
Confidence 578999999999999999776332 22333456677788888887
No 4
>PHA03164 hypothetical protein; Provisional
Probab=28.19 E-value=12 Score=29.80 Aligned_cols=55 Identities=16% Similarity=0.167 Sum_probs=34.4
Q ss_pred CCCeeEEEEEecccccccccCCccccCCcc--cceeeeeecceeeeehhh-hhhhhhhhh
Q psy16309 161 DMDGQVLISLDTEPTRLACKGDVKYYDNNR--LDFILRSLLNLLVITVCC-TSFILCTRA 217 (271)
Q Consensus 161 aHSGqIkI~Ld~e~~i~eCkg~~~~~~~~~--~~~~~~~~fD~~VIliCi-~SliLC~RS 217 (271)
-|+||+....+++.+..||-.+.+....+. +++. |--| .|.+++|+ +|.|||+-=
T Consensus 19 vm~gqVspH~~NdtsfveclpPpqisrtawnlwnnr-Rktf-tFlvLtgLaIamILfiif 76 (88)
T PHA03164 19 VMDGQVSPHQENDTSFVECLPPPQISRTAWNLWNNR-RKTF-TFLVLTGLAIAMILFIIF 76 (88)
T ss_pred HHccccccccccCcccceecCCcccCchhHHHHHhh-hhee-ehHHHHHHHHHHHHHHHH
Confidence 488999999999999999986654322211 1111 1112 35566665 578888643
No 5
>PLN02701 alpha-mannosidase
Probab=24.67 E-value=31 Score=38.43 Aligned_cols=20 Identities=25% Similarity=0.170 Sum_probs=15.8
Q ss_pred CCCcccccccccceEEEeeeehh
Q psy16309 239 KLSMEGRLEFLNLWYDAVPLSFC 261 (271)
Q Consensus 239 ~Ls~sdrlEFvNgWYILIIISDi 261 (271)
+|=-++||||++|||+| +|-
T Consensus 110 ~LV~~GrLE~vgGgwvm---~DE 129 (1050)
T PLN02701 110 KLVKNGQLEIVGGGWVM---NDE 129 (1050)
T ss_pred HHHHcCCEEEECCceec---ccc
Confidence 34448899999999999 664
No 6
>PF05304 DUF728: Protein of unknown function (DUF728); InterPro: IPR007968 This entry is represented by the Tobacco rattle virus, 16kDa protein; it is a family of uncharacterised viral proteins.
Probab=23.79 E-value=31 Score=28.32 Aligned_cols=27 Identities=22% Similarity=0.427 Sum_probs=20.4
Q ss_pred CCccccccccc-ceEEEeeeehhhHhhh
Q psy16309 240 LSMEGRLEFLN-LWYDAVPLSFCVQELY 266 (271)
Q Consensus 240 Ls~sdrlEFvN-gWYILIIISDiL~~~~ 266 (271)
++...|-|=.| |||+.|+|.|-..|.|
T Consensus 34 ~~v~RkC~~~NCGWf~~i~v~~~~~eVY 61 (103)
T PF05304_consen 34 VGVKRKCECNNCGWFPAISVNDDTFEVY 61 (103)
T ss_pred hChhhhhhccCCCceEEEEEeccEEeee
Confidence 34445555555 9999999999888887
No 7
>KOG0623|consensus
Probab=21.68 E-value=44 Score=33.68 Aligned_cols=16 Identities=19% Similarity=0.301 Sum_probs=13.8
Q ss_pred CccchhhHHhhhhhcc
Q psy16309 58 LNIELSLWWHFLKVGS 73 (271)
Q Consensus 58 ~~~pL~lCq~~Yk~g~ 73 (271)
.+-|+.+||+||++|.
T Consensus 268 LGKPV~Laq~Yyq~GA 283 (541)
T KOG0623|consen 268 LGKPVDLAQQYYQDGA 283 (541)
T ss_pred cCChHHHHHHHHhcCC
Confidence 3569999999999985
No 8
>cd01755 PLAT_lipase PLAT/ LH2 domain present in connection with a lipase domain. This family contains two major subgroups, the lipoprotein lipase (LPL) and the pancreatic triglyceride lipase. LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs). The central role of triglyceride lipases is in energy production. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=19.12 E-value=1.4e+02 Score=24.39 Aligned_cols=26 Identities=12% Similarity=0.268 Sum_probs=19.8
Q ss_pred EEEEEEEEEeCCCCCe---eEEEEEeccc
Q psy16309 149 YQFDITINLDNSDMDG---QVLISLDTEP 174 (271)
Q Consensus 149 Y~F~ItI~FDNkaHSG---qIkI~Ld~e~ 174 (271)
|.+.|+|.+.++..+| +|.|.|--+.
T Consensus 1 ~hY~vtV~~~~~~~agt~~~v~v~L~G~~ 29 (120)
T cd01755 1 WHYQVKVHLSGKKNLEVDGTFTVSLYGTK 29 (120)
T ss_pred CEEEEEEEEeCccccCcCccEEEEEEcCC
Confidence 5678888888887666 9999887443
No 9
>cd01758 PLAT_LPL PLAT/ LH2 domain present in lipoprotein lipase (LPL). LPL is a key enzyme in catabolism of plasma lipoprotein triglycerides (TGs) and has therefeore has a profound influence on triglyceride and high-density lipoprotein (HDL) cholesterol levels in the blood. In general, PLAT/LH2 domain's proposed function is to mediate interaction with lipids or membrane bound proteins.
Probab=16.46 E-value=1.7e+02 Score=24.84 Aligned_cols=25 Identities=24% Similarity=0.372 Sum_probs=17.8
Q ss_pred EEEEEEEEEeCCCC----CeeEEEEEecc
Q psy16309 149 YQFDITINLDNSDM----DGQVLISLDTE 173 (271)
Q Consensus 149 Y~F~ItI~FDNkaH----SGqIkI~Ld~e 173 (271)
|.+.|+|.+.++.. +|+|.|+|--.
T Consensus 1 yhYqVtV~~~~~~~~~~t~~~v~i~L~G~ 29 (137)
T cd01758 1 FHYQLKIHFFNQTNRIETDPTFTISLYGT 29 (137)
T ss_pred CeEEEEEEEecccCCCcccceEEEEEEcC
Confidence 56777788887764 44888888743
No 10
>cd01759 PLAT_PL PLAT/LH2 domain of pancreatic triglyceride lipase. Lipases hydrolyze phospholipids and triglycerides to generate fatty acids for energy production or for storage and to release inositol phosphates that act as second messengers. The central role of triglyceride lipases is in energy production. The proposed function of PLAT/LH2 domains is to mediate interaction with lipids or membrane bound proteins.
Probab=16.27 E-value=1.7e+02 Score=24.23 Aligned_cols=22 Identities=23% Similarity=0.646 Sum_probs=15.7
Q ss_pred EEEEEEEEeCC-CCCeeEEEEEe
Q psy16309 150 QFDITINLDNS-DMDGQVLISLD 171 (271)
Q Consensus 150 ~F~ItI~FDNk-aHSGqIkI~Ld 171 (271)
.+.|+|.|.++ ...|.|.|+|-
T Consensus 2 ~Yqv~V~~s~~~~~~g~~~vsL~ 24 (113)
T cd01759 2 RYKVSVTLSGKKKVTGTILVSLY 24 (113)
T ss_pred eEEEEEEEecccccCceEEEEEE
Confidence 46677777765 47788888876
Done!