Query psy16309
Match_columns 271
No_of_seqs 109 out of 129
Neff 4.3
Searched_HMMs 13730
Date Fri Aug 16 18:01:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16309.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/16309hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2je8a1 b.1.4.1 (A:220-330) Be 20.6 54 0.0039 22.5 4.2 34 125-158 65-98 (111)
2 d1iufa1 a.4.1.7 (A:-2-75) Ars- 13.8 43 0.0031 23.6 2.1 31 214-244 15-52 (78)
3 d3b7sa2 b.98.1.1 (A:1-208) Leu 10.9 58 0.0042 24.8 2.2 24 149-172 21-44 (208)
4 d1vd6a1 c.1.18.3 (A:8-224) Put 9.5 44 0.0032 24.7 1.0 23 5-27 27-49 (217)
5 d3bvua3 c.6.2.1 (A:31-411) Gol 9.3 28 0.0021 30.6 -0.3 14 242-255 124-137 (381)
6 d1rp1a1 b.12.1.2 (A:337-449) P 8.8 1.2E+02 0.0086 21.3 3.2 27 149-175 2-28 (113)
7 d1gpla1 b.12.1.2 (A:337-449) P 8.4 1.3E+02 0.0092 21.4 3.2 26 149-174 2-27 (112)
8 d1zcca1 c.1.18.3 (A:1-240) Gly 7.8 56 0.0041 25.1 1.0 24 4-27 27-50 (240)
9 d1bo9a_ a.65.1.1 (A:) Annexin 7.5 75 0.0055 20.8 1.4 26 212-241 28-53 (73)
10 d1j1ta_ b.29.1.18 (A:) Alginat 7.5 1.4E+02 0.011 23.8 3.4 18 15-35 110-127 (228)
No 1
>d2je8a1 b.1.4.1 (A:220-330) Beta-mannosidase, domains 2, 4 and 5 {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=20.56 E-value=54 Score=22.50 Aligned_cols=34 Identities=15% Similarity=0.150 Sum_probs=24.8
Q ss_pred eeEEEEEEeeeeeecCCCCCCCceEEEEEEEEEe
Q psy16309 125 KAELKISLKTVNFKAAGPISPPDCYQFDITINLD 158 (271)
Q Consensus 125 ~vtI~F~LKtInLqti~~~e~PDCY~F~ItI~FD 158 (271)
.+++.|.++.+.|=.......|.-|++.+++.-|
T Consensus 65 ~v~~~~~i~~p~LW~P~g~g~P~LY~~~v~l~~~ 98 (111)
T d2je8a1 65 HITLPAEVTNPVRWMPNGWGTPTLYDFSAQIACG 98 (111)
T ss_dssp EEEEEEEEESCCCBCCTTSSCBCCEEEEEEEEET
T ss_pred EEEEEEEeCCccCcCCCCCCCCceEEEEEEEEEC
Confidence 4667778887776444445589999999998753
No 2
>d1iufa1 a.4.1.7 (A:-2-75) Ars-binding protein 1, ABP1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=13.78 E-value=43 Score=23.64 Aligned_cols=31 Identities=26% Similarity=0.420 Sum_probs=23.5
Q ss_pred hhhhHHHHHh-------hhHHHHHHhHHhcCCCCCccc
Q psy16309 214 CTRAIWRAQL-------LKYETINFFQEKFNKKLSMEG 244 (271)
Q Consensus 214 C~RSIirg~~-------L~ke~~~FF~~~~~k~Ls~sd 244 (271)
--|.-+|++. -+++..++|+++|+.+++++.
T Consensus 15 ~qK~ALR~~~~~~~~~~sqk~l~~WFe~~y~q~Isqss 52 (78)
T d1iufa1 15 HEKRALRHYFFQLQNRSGQQDLIEWFREKFGKDISQPS 52 (78)
T ss_dssp HHHHHHHHHHHSSSSCCCHHHHHHHHHHHHSSCCSSSS
T ss_pred HHHHHHHHHHHhcCCCccHHHHHHHHHHHHCCcchHHH
Confidence 3455556552 468899999999999999864
No 3
>d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.92 E-value=58 Score=24.76 Aligned_cols=24 Identities=4% Similarity=0.383 Sum_probs=19.3
Q ss_pred EEEEEEEEEeCCCCCeeEEEEEec
Q psy16309 149 YQFDITINLDNSDMDGQVLISLDT 172 (271)
Q Consensus 149 Y~F~ItI~FDNkaHSGqIkI~Ld~ 172 (271)
|..++++.++++.-+|.+.|.++.
T Consensus 21 y~L~l~~d~~~~~~~G~v~I~~~~ 44 (208)
T d3b7sa2 21 LHLRCSVDFTRRTLTGTAALTVQS 44 (208)
T ss_dssp EEEEEEEETTTTEEEEEEEEEEEE
T ss_pred EEEEEEEcCCCCEEEEEEEEEEEE
Confidence 777788888888888888888863
No 4
>d1vd6a1 c.1.18.3 (A:8-224) Putative glycerophosphodiester phosphodiesterase TTHB141 {Thermus thermophilus [TaxId: 274]}
Probab=9.53 E-value=44 Score=24.75 Aligned_cols=23 Identities=30% Similarity=0.546 Sum_probs=19.2
Q ss_pred CCCCCCcceeEEccCceEEEEEE
Q psy16309 5 SGYDTNELDFRVSANGIFHFQVQ 27 (271)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~ 27 (271)
.|+|.=|+|.|+++||++-..|-
T Consensus 27 ~G~~~iE~DV~~TkDg~~vv~HD 49 (217)
T d1vd6a1 27 AGLDGVELDVWPTRDGVFAVRHD 49 (217)
T ss_dssp TTCSEEEEEEEECTTSCEEECSC
T ss_pred cCCCEEEEEEEEecCCCEEEecc
Confidence 58999999999999998765543
No 5
>d3bvua3 c.6.2.1 (A:31-411) Golgi alpha-mannosidase II {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=9.26 E-value=28 Score=30.57 Aligned_cols=14 Identities=29% Similarity=0.396 Sum_probs=12.7
Q ss_pred cccccccccceEEE
Q psy16309 242 MEGRLEFLNLWYDA 255 (271)
Q Consensus 242 ~sdrlEFvNgWYIL 255 (271)
-++||||++|||+|
T Consensus 124 ~~GrlEivgg~wv~ 137 (381)
T d3bvua3 124 KNGQLEFVTGGWVM 137 (381)
T ss_dssp HTTSEEESSCCSSC
T ss_pred HCCCEEEeCCeeec
Confidence 37899999999998
No 6
>d1rp1a1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Dog (Canis familiaris) [TaxId: 9615]}
Probab=8.77 E-value=1.2e+02 Score=21.31 Aligned_cols=27 Identities=19% Similarity=0.400 Sum_probs=21.9
Q ss_pred EEEEEEEEEeCCCCCeeEEEEEecccc
Q psy16309 149 YQFDITINLDNSDMDGQVLISLDTEPT 175 (271)
Q Consensus 149 Y~F~ItI~FDNkaHSGqIkI~Ld~e~~ 175 (271)
|++.|+|...++.-+|+|.|.|--+..
T Consensus 2 ~rY~V~V~t~gagT~a~v~i~L~G~~g 28 (113)
T d1rp1a1 2 WRYGVSITLSGKRATGQAKVALFGSKG 28 (113)
T ss_dssp EEEEEEEEEEESCEEEEEEEEEEETTE
T ss_pred eEEEEEEEECCCCccceEEEEEEcCCC
Confidence 678888888888888999988876544
No 7
>d1gpla1 b.12.1.2 (A:337-449) Pancreatic lipase, C-terminal domain {Guinea pig (Cavia porcellus) [TaxId: 10141]}
Probab=8.45 E-value=1.3e+02 Score=21.40 Aligned_cols=26 Identities=19% Similarity=0.583 Sum_probs=20.3
Q ss_pred EEEEEEEEEeCCCCCeeEEEEEeccc
Q psy16309 149 YQFDITINLDNSDMDGQVLISLDTEP 174 (271)
Q Consensus 149 Y~F~ItI~FDNkaHSGqIkI~Ld~e~ 174 (271)
|++.|+|....+.-+|.|.|.|--+.
T Consensus 2 ~rY~V~V~t~g~~T~~~V~i~L~G~~ 27 (112)
T d1gpla1 2 WRYKVSVTLSGKKVTGHILVSLFGNK 27 (112)
T ss_dssp EEEEEEEEEEECCEEEEEEEEEEESS
T ss_pred cEEEEEEEEcCCCccceEEEEEEECC
Confidence 67888888888888888888886553
No 8
>d1zcca1 c.1.18.3 (A:1-240) Glycerophosphodiester phosphodiesterase UgpQ {Agrobacterium tumefaciens [TaxId: 358]}
Probab=7.83 E-value=56 Score=25.14 Aligned_cols=24 Identities=42% Similarity=0.499 Sum_probs=20.2
Q ss_pred CCCCCCCcceeEEccCceEEEEEE
Q psy16309 4 QSGYDTNELDFRVSANGIFHFQVQ 27 (271)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~ 27 (271)
+.|+|.=|+|.++++||..-..+.
T Consensus 27 ~~G~~~iE~Dv~~TkDg~~Vv~HD 50 (240)
T d1zcca1 27 QQGADYIELDVRESADGVLYVIHD 50 (240)
T ss_dssp HTTCSEEEEEEEECTTCCEEECSS
T ss_pred HcCCCEEEEEEEEecCCCEEEecc
Confidence 468999999999999998766554
No 9
>d1bo9a_ a.65.1.1 (A:) Annexin I {Human (Homo sapiens) [TaxId: 9606]}
Probab=7.51 E-value=75 Score=20.79 Aligned_cols=26 Identities=23% Similarity=0.224 Sum_probs=17.1
Q ss_pred hhhhhhHHHHHhhhHHHHHHhHHhcCCCCC
Q psy16309 212 ILCTRAIWRAQLLKYETINFFQEKFNKKLS 241 (271)
Q Consensus 212 iLC~RSIirg~~L~ke~~~FF~~~~~k~Ls 241 (271)
|||.||-..=. +..+-|++.||+.|-
T Consensus 28 Il~~rs~~~l~----~i~~~Y~~~y~~~L~ 53 (73)
T d1bo9a_ 28 ILTKRNNAQRQ----QIKAAYLQETGKPLD 53 (73)
T ss_dssp HHHHSCSTTHH----HHHHHHHHHTSSCSS
T ss_pred HHHhCCHHHHH----HHHHHHHHHHCcCHH
Confidence 58999876544 344556777787764
No 10
>d1j1ta_ b.29.1.18 (A:) Alginate lyase {Alteromonas sp. [TaxId: 232]}
Probab=7.48 E-value=1.4e+02 Score=23.78 Aligned_cols=18 Identities=39% Similarity=0.612 Sum_probs=14.8
Q ss_pred EEccCceEEEEEEEEEeeccc
Q psy16309 15 RVSANGIFHFQVQYFVITCRS 35 (271)
Q Consensus 15 ~~~~~~~~~~~~~y~~~~~~~ 35 (271)
.|.+||||- -|-||.|.|
T Consensus 110 sva~ngifd---vyvrlrnts 127 (228)
T d1j1ta_ 110 SVANNGIFD---VYVRLRNTS 127 (228)
T ss_dssp CCTTSSEEE---EEEEEEBTT
T ss_pred hhccCceeE---EEEEEecCC
Confidence 588999995 578898876
Done!