BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy1631
         (77 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9Y6J0|CABIN_HUMAN Calcineurin-binding protein cabin-1 OS=Homo sapiens GN=CABIN1 PE=1
            SV=1
          Length = 2220

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 46/65 (70%)

Query: 13   CLTSVVHFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVALKDE 72
            C  +  +F  G+WR P+ ++DRPGSFA+HM+RSI L++ +L++++D  TL+ ++  L+  
Sbjct: 1573 CERNKTNFFNGIWRIPVDEIDRPGSFAWHMNRSIVLLLKVLAQLRDHSTLLKVSSMLQRT 1632

Query: 73   PEAEK 77
            P+  K
Sbjct: 1633 PDQGK 1637


>sp|O88480|CABIN_RAT Calcineurin-binding protein cabin-1 OS=Rattus norvegicus GN=Cabin1
            PE=1 SV=1
          Length = 2182

 Score = 64.7 bits (156), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 26/65 (40%), Positives = 46/65 (70%)

Query: 13   CLTSVVHFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVALKDE 72
            C  +  +F  G+WR P+ ++DRPGSFA+HM+RSI L++ +L++++D  TL+ ++  L+  
Sbjct: 1573 CERNKTNFFNGIWRIPVDEIDRPGSFAWHMNRSIVLLLKVLAQLRDHSTLLKVSSMLQRT 1632

Query: 73   PEAEK 77
            P+  K
Sbjct: 1633 PDQGK 1637


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.136    0.406 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,425,756
Number of Sequences: 539616
Number of extensions: 909361
Number of successful extensions: 1739
Number of sequences better than 100.0: 2
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1737
Number of HSP's gapped (non-prelim): 2
length of query: 77
length of database: 191,569,459
effective HSP length: 48
effective length of query: 29
effective length of database: 165,667,891
effective search space: 4804368839
effective search space used: 4804368839
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)