Query psy1631
Match_columns 77
No_of_seqs 27 out of 29
Neff 3.0
Searched_HMMs 29240
Date Fri Aug 16 18:02:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1631.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1631hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2vyw_A Hemoglobin; trematode, 70.3 9 0.00031 24.6 4.9 52 19-70 45-96 (148)
2 1mba_A Myoglobin; oxygen stora 67.0 6.9 0.00024 24.5 3.7 51 19-69 42-92 (147)
3 1x3k_A Hemoglobin component V; 66.6 6 0.00021 25.4 3.4 52 19-70 44-95 (152)
4 2wtg_A Globin-like protein; me 64.9 5.4 0.00019 26.7 3.0 54 18-71 46-99 (159)
5 1b0b_A Hemoglobin; hemoprotein 64.9 9.1 0.00031 23.9 3.9 51 19-69 41-92 (142)
6 2bk9_A CG9734-PA; oxygen trans 63.2 9.3 0.00032 24.2 3.8 50 19-69 40-92 (153)
7 1it2_A Hemoglobin; hagfish, de 57.9 13 0.00045 23.6 3.8 50 19-69 50-99 (146)
8 1h97_A Globin-3; HET: HEM; 1.1 53.8 25 0.00085 22.4 4.7 53 19-71 44-96 (147)
9 3pt8_A Hemoglobin II; oxygen c 53.6 10 0.00035 24.0 2.7 51 19-69 43-94 (152)
10 1hlm_A Hemoglobin (cyano Met); 50.6 27 0.00093 22.0 4.4 50 19-69 52-101 (159)
11 1ash_A Hemoglobin (OXY); oxyge 50.3 13 0.00045 24.8 3.0 53 18-70 42-94 (150)
12 1x46_A Globin chain, hemoglobi 48.0 20 0.00068 22.5 3.4 51 19-69 42-95 (150)
13 3pt8_B Hemoglobin III; oxygen 47.3 18 0.0006 22.8 3.1 51 19-69 43-94 (152)
14 1ith_A Hemoglobin (cyano Met); 45.0 34 0.0012 21.2 4.1 40 19-58 42-81 (141)
15 3lb2_A Dehaloperoxidase A; glo 43.9 24 0.00081 22.7 3.4 51 19-69 33-83 (137)
16 2c0k_A Hemoglobin; oxygen tran 42.5 24 0.00081 22.4 3.2 52 19-70 40-94 (151)
17 1hlb_A Hemoglobin (deoxy); oxy 37.5 16 0.00054 23.2 1.7 50 19-69 52-101 (158)
18 3mhs_C SAGA-associated factor 36.1 13 0.00045 24.5 1.2 12 35-46 82-93 (99)
19 3hhs_A Propo-P2, phenoloxidase 33.5 60 0.002 27.1 4.9 46 24-70 58-121 (694)
20 4b4y_A Neuroglobin; transport 33.2 26 0.00087 22.3 2.2 53 19-71 48-101 (154)
21 3esg_A HUTD, putative uncharac 32.7 7.4 0.00025 27.7 -0.5 17 24-40 46-62 (193)
22 3g46_A Globin-1; oxygen transp 31.7 79 0.0027 19.8 4.3 51 19-71 49-99 (146)
23 4hrt_A Globin-2 A chain; oxyge 31.1 81 0.0028 19.9 4.4 36 36-71 65-100 (150)
24 4akr_A F-actin-capping protein 30.6 11 0.00039 28.0 0.2 11 16-26 158-168 (281)
25 4hrt_B Hemoglobin B chain; oxy 30.3 71 0.0024 20.2 4.0 50 19-70 52-101 (152)
26 2lhb_A Hemoglobin V (cyano Met 29.4 52 0.0018 20.6 3.2 51 19-69 50-101 (149)
27 2nrl_A Myoglobin; transport pr 28.2 97 0.0033 19.4 4.3 43 19-61 38-80 (147)
28 2ia7_A Tail lysozyme, putative 28.1 30 0.001 21.8 1.9 35 16-51 3-43 (134)
29 2ys2_A Cytoplasmic tyrosine-pr 27.3 19 0.00064 20.8 0.7 11 3-13 10-20 (50)
30 1yll_A PA5104, conserved hypot 27.2 10 0.00034 26.8 -0.6 17 24-40 41-57 (200)
31 2xki_A Neural hemoglobin; oxyg 26.4 85 0.0029 19.1 3.7 45 19-67 24-68 (110)
32 3mvc_A Globin protein 6; oxyge 26.3 86 0.0029 20.3 3.9 35 37-71 56-90 (161)
33 2gz6_A N-acetyl-D-glucosamine 25.9 43 0.0015 23.5 2.5 19 38-56 369-387 (388)
34 1juq_A ADP-ribosylation factor 21.8 28 0.00094 23.5 0.8 40 36-75 4-47 (171)
35 2lxl_A Vacuolar protein sortin 21.7 49 0.0017 22.9 2.1 30 31-60 103-135 (183)
36 2zs0_A Extracellular giant hem 21.7 1.2E+02 0.0042 18.7 3.8 36 35-70 56-91 (140)
37 2kfs_A Conserved hypothetical 21.6 62 0.0021 22.2 2.5 40 22-65 63-104 (148)
38 2lr8_A CAsp8-associated protei 26.3 21 0.00071 22.4 0.0 18 59-76 36-53 (70)
39 2ls0_1 Zoocin A endopeptidase; 20.6 25 0.00086 24.2 0.4 23 15-38 26-48 (128)
40 1x9f_C Erythrocruorin, globin 20.5 1.3E+02 0.0045 18.8 3.8 35 35-69 64-98 (153)
41 2kzv_A Uncharacterized protein 20.5 72 0.0025 19.9 2.5 33 44-76 8-44 (92)
42 1yhu_A Hemoglobin A1 chain; gl 20.4 1.2E+02 0.0039 19.0 3.5 34 37-70 58-91 (145)
No 1
>2vyw_A Hemoglobin; trematode, oxygen binding; HET: HEM; 1.8A {Fasciola hepatica}
Probab=70.31 E-value=9 Score=24.61 Aligned_cols=52 Identities=12% Similarity=0.043 Sum_probs=40.7
Q ss_pred ccccccccccccccCCCCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHhc
Q psy1631 19 HFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVALK 70 (77)
Q Consensus 19 NFFnGiWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L~ 70 (77)
++|+..=..+.++|.-...|..|..|-+.-|-++...++|.+.|.....+|.
T Consensus 45 ~~F~~~~~~~~~~l~~n~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~ 96 (148)
T 2vyw_A 45 SYFSKLQGLTKDNVGQSEGIRYYGRTLGEELIRLLKAASNPSVLEERIVQGA 96 (148)
T ss_dssp GGSGGGTTCCTTTGGGCSHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HhhhhhcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 4565443456778888999999999999999999999999777665555543
No 2
>1mba_A Myoglobin; oxygen storage; HET: HEM; 1.60A {Aplysia limacina} SCOP: a.1.1.2 PDB: 2fal_A* 3mba_A* 4mba_A* 5mba_A* 2fam_A* 1dm1_A*
Probab=67.04 E-value=6.9 Score=24.53 Aligned_cols=51 Identities=12% Similarity=0.159 Sum_probs=38.6
Q ss_pred ccccccccccccccCCCCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHh
Q psy1631 19 HFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVAL 69 (77)
Q Consensus 19 NFFnGiWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L 69 (77)
++|+..=..+.+++.....|.+|..|-+.-|-.+...++|.+.|......|
T Consensus 42 ~~F~~~~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ld~~~~l~~~l~~L 92 (147)
T 1mba_A 42 NFFADFKGKSVADIKASPKLRDVSSRIFTRLNEFVNNAANAGKMSAMLSQF 92 (147)
T ss_dssp GGCTTTTTCCHHHHHTCTTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhhHhhcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 455443334667777788999999999999999999999987665554444
No 3
>1x3k_A Hemoglobin component V; diptera, midge larva, oxygen storage/transport complex; HET: HEM; 1.64A {Tokunagayusurika akamusi} PDB: 2zwj_A* 3a5a_A* 3a5b_A* 3a5g_A* 3a9m_A* 3arj_A* 3ark_A* 3arl_A*
Probab=66.62 E-value=6 Score=25.41 Aligned_cols=52 Identities=10% Similarity=0.176 Sum_probs=40.4
Q ss_pred ccccccccccccccCCCCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHhc
Q psy1631 19 HFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVALK 70 (77)
Q Consensus 19 NFFnGiWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L~ 70 (77)
++|+..=..+.+++-....|.+|..|-+.-|-++...++|.+.|......|.
T Consensus 44 ~~F~~f~~~~~~~l~~~~~~~ah~~~v~~~l~~~v~~ldd~~~l~~~l~~L~ 95 (152)
T 1x3k_A 44 DKFETLKGHPLDEVKDTANFKLIAGRIFTIFDNCVKNVGNDKGFQKVIADMS 95 (152)
T ss_dssp GGSTTTTTSCHHHHTTSHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHhHhhcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4555433446778877889999999999999999999999987766655553
No 4
>2wtg_A Globin-like protein; metal-binding, oxygen transport; HET: HEM; 1.50A {Caenorhabditis elegans} PDB: 2wth_A*
Probab=64.91 E-value=5.4 Score=26.74 Aligned_cols=54 Identities=9% Similarity=0.030 Sum_probs=46.6
Q ss_pred cccccccccccccccCCCCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHhcc
Q psy1631 18 VHFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVALKD 71 (77)
Q Consensus 18 tNFFnGiWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L~r 71 (77)
-++|++.=.++.+|+...+.|..|..|=+.-|..+...++|-+.|.....+|-+
T Consensus 46 r~lF~~~~~v~~~d~~~s~~f~~q~~rl~~aL~~~v~~lDd~~~L~~~l~~L~~ 99 (159)
T 2wtg_A 46 RVYFKGAEKYTADDVKKSERFDKQGQRILLACHLLANVYTNEEVFKGYVRETIN 99 (159)
T ss_dssp GGGSTTCTTCCHHHHHTCHHHHHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHH
T ss_pred HHHccCcccCCHHhhhcCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Confidence 357887777889999999999999999999999999999999998877766643
No 5
>1b0b_A Hemoglobin; hemoprotein, sulfide carrier, globins, oxygen transport, oxygen storage/transport complex; HET: HEM; 1.43A {Lucina pectinata} SCOP: a.1.1.2 PDB: 1ebt_A* 1flp_A* 1moh_A*
Probab=64.87 E-value=9.1 Score=23.91 Aligned_cols=51 Identities=12% Similarity=0.065 Sum_probs=37.5
Q ss_pred ccccc-cccccccccCCCCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHh
Q psy1631 19 HFGLG-LWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVAL 69 (77)
Q Consensus 19 NFFnG-iWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L 69 (77)
++|+. .=..+.+++.-...|.+|..|-+.-|-.+...++|.+.|......|
T Consensus 41 ~~F~~~f~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ld~~~~l~~~l~~L 92 (142)
T 1b0b_A 41 AKFSGLFSGAAKGTVKNTPEMAAQAQSFKGLVSNWVDNLDNAGALEGQCKTF 92 (142)
T ss_dssp HTTTTTTTTCCGGGCTTSHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHH
T ss_pred HHhHHhhCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHH
Confidence 35554 3345666765555799999999999999999999977766555444
No 6
>2bk9_A CG9734-PA; oxygen transport, drosophila melanogaster hemoglobin, heme hexacoordination, insect hemoglobin, protein cavities; HET: HEM CXS; 1.2A {Drosophila melanogaster} PDB: 2g3h_A*
Probab=63.20 E-value=9.3 Score=24.22 Aligned_cols=50 Identities=18% Similarity=0.247 Sum_probs=38.3
Q ss_pred ccccccccccccccCCCCchhHHHHHHHHHHHHHHHhc---CcHhHHHHHHHHh
Q psy1631 19 HFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEI---KDAKTLMDIAVAL 69 (77)
Q Consensus 19 NFFnGiWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~---~D~~tLl~l~~~L 69 (77)
++|+ .=..+.+++.....|.+|..|-+.-|-++...+ +|.+.|......|
T Consensus 40 ~~F~-~~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~l~~~dd~~~l~~~l~~L 92 (153)
T 2bk9_A 40 EKFP-FRDVPLEELSGNARFRAHAGRIIRVFDESIQVLGQDGDLEKLDEIWTKI 92 (153)
T ss_dssp GGST-TTTSCGGGGGGCHHHHHHHHHHHHHHHHHHHHTTSTTHHHHHHHHHHHH
T ss_pred hcCc-CCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHccccCCHHHHHHHHHHH
Confidence 4666 335577788888899999999999999999999 7776665555444
No 7
>1it2_A Hemoglobin; hagfish, deoxy form, oxygen storage/transport complex; HET: HEM; 1.60A {Eptatretus burgeri} SCOP: a.1.1.2 PDB: 1it3_A*
Probab=57.86 E-value=13 Score=23.62 Aligned_cols=50 Identities=8% Similarity=0.093 Sum_probs=39.6
Q ss_pred ccccccccccccccCCCCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHh
Q psy1631 19 HFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVAL 69 (77)
Q Consensus 19 NFFnGiWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L 69 (77)
++|+.. +.|.+++--...|.+|..|-+.-|-++...++|-+.|.....+|
T Consensus 50 ~~F~~f-~~~~~~l~~n~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L 99 (146)
T 1it2_A 50 ASFPKF-STKKSNLEQDPEVKHQAVVIFNKVNEIINSMDNQEEIIKSLKDL 99 (146)
T ss_dssp GGCTTT-TTCCSCGGGCHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHH
T ss_pred HHcccc-CCCHHHHhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 567543 37888998888999999999999999999999966665544443
No 8
>1h97_A Globin-3; HET: HEM; 1.17A {Paramphistomum epiclitum} SCOP: a.1.1.2 PDB: 1kfr_A*
Probab=53.84 E-value=25 Score=22.44 Aligned_cols=53 Identities=15% Similarity=0.112 Sum_probs=40.6
Q ss_pred ccccccccccccccCCCCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHhcc
Q psy1631 19 HFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVALKD 71 (77)
Q Consensus 19 NFFnGiWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L~r 71 (77)
++|+..=..+.++|.....|..|..|=+.-|..+...++|.+.|.....+|.+
T Consensus 44 ~~F~~~~~~~~~~l~~n~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~~ 96 (147)
T 1h97_A 44 SHFSRLEGHTIENVMQSEGIKHYARTLTEAIVHMLKEISNDAEVKKIAAQYGK 96 (147)
T ss_dssp GGSGGGTTCCTTTGGGSHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred HhhhhhcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHH
Confidence 46654334566778778889999999999999999999998877666555543
No 9
>3pt8_A Hemoglobin II; oxygen carrier, oxygen transport; HET: HEM; 1.76A {Lucina pectinata} SCOP: a.1.1.0 PDB: 3pi1_A* 2olp_A* 3pi3_A* 3pi4_A* 3pt7_A* 3pi2_A*
Probab=53.62 E-value=10 Score=23.95 Aligned_cols=51 Identities=8% Similarity=0.001 Sum_probs=39.5
Q ss_pred ccccc-cccccccccCCCCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHh
Q psy1631 19 HFGLG-LWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVAL 69 (77)
Q Consensus 19 NFFnG-iWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L 69 (77)
++|+. .=.++.+++.-...|..|..|-+.-|-.+...++|.+.|......|
T Consensus 43 ~~F~~~f~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ld~~~~l~~~l~~L 94 (152)
T 3pt8_A 43 TPFKSLFGGLTLAQLQDNPKMKAQSLVFCNGMSSFVDHLDDNDMLVVLIQKM 94 (152)
T ss_dssp GGGHHHHTTSCHHHHTTCHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHH
T ss_pred HHhHHHHcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 45555 3345667887788999999999999999999999998766555554
No 10
>1hlm_A Hemoglobin (cyano Met); oxygen transport; HET: HEM; 2.90A {Caudina arenicola} SCOP: a.1.1.2
Probab=50.58 E-value=27 Score=21.99 Aligned_cols=50 Identities=16% Similarity=0.150 Sum_probs=38.6
Q ss_pred ccccccccccccccCCCCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHh
Q psy1631 19 HFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVAL 69 (77)
Q Consensus 19 NFFnGiWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L 69 (77)
++|+..=.++.++|.....|..|..|-+.-|..+...++| ..|......|
T Consensus 52 ~~F~~~~d~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ld~-~~l~~~l~~L 101 (159)
T 1hlm_A 52 RKFPQMAGLSPAELRTSRQMHAHAIRVSALMTTYIDEMDT-EVLPELLATL 101 (159)
T ss_dssp TSSTTTTTSCSTTCSCCHHHHHHHHHHHHHHHHHHHTTTS-TTHHHHHHHH
T ss_pred HhcccccCCCHHHHhcCHHHHHHHHHHHHHHHHHHHhCCC-HHHHHHHHHH
Confidence 4666543567778888889999999999999999999999 6665544444
No 11
>1ash_A Hemoglobin (OXY); oxygen storage; HET: HEM; 2.15A {Ascaris suum} SCOP: a.1.1.2
Probab=50.32 E-value=13 Score=24.82 Aligned_cols=53 Identities=13% Similarity=0.015 Sum_probs=45.8
Q ss_pred cccccccccccccccCCCCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHhc
Q psy1631 18 VHFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVALK 70 (77)
Q Consensus 18 tNFFnGiWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L~ 70 (77)
-++|++.=.+|.+|+.-.+.|..|..|=+.-|..+...++|-+.|......|-
T Consensus 42 r~~F~~~~~~~~~d~~~s~~f~~q~~rl~~aL~~~i~~lDd~~~L~~~l~~L~ 94 (150)
T 1ash_A 42 RKYFKSREEYTAEDVQNDPFFAKQGQKILLACHVLCATYDDRETFNAYTRELL 94 (150)
T ss_dssp GGGSTTTTTCCHHHHHHCHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHH
T ss_pred HHHhhhcccCChhhhhcCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 45898888889999999999999999999999999999999999877666553
No 12
>1x46_A Globin chain, hemoglobin component VII; diptera, midge larva, oxygen storage/transport complex; HET: HEM; 1.50A {Tokunagayusurika akamusi}
Probab=47.96 E-value=20 Score=22.49 Aligned_cols=51 Identities=12% Similarity=0.151 Sum_probs=37.8
Q ss_pred ccccccccccccccCCCCchhHHHHHHHHHHHHHHHhcCc---HhHHHHHHHHh
Q psy1631 19 HFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKD---AKTLMDIAVAL 69 (77)
Q Consensus 19 NFFnGiWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D---~~tLl~l~~~L 69 (77)
++|+..=....+|+.....|..|..|-+.-|-.+...++| .+.|......|
T Consensus 42 ~~F~~~~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ld~~~~~~~l~~~l~~L 95 (150)
T 1x46_A 42 AKFSAFAGKDLESLKDTAPFALHATRIVSVINEAIALMGVAENRPALKNVLKQQ 95 (150)
T ss_dssp TTCTTTTTSCHHHHTTSHHHHHHHHHHHHHHHHHHHHTTCGGGHHHHHHHHHHH
T ss_pred HhhHhccCCCHHHHhhChHHHHHHHHHHHHHHHHHHHccCcCcHHHHHHHHHHH
Confidence 3454332345677877889999999999999999999999 76665555444
No 13
>3pt8_B Hemoglobin III; oxygen carrier, oxygen transport; HET: HEM; 1.76A {Lucina pectinata} PDB: 3pt7_B*
Probab=47.32 E-value=18 Score=22.79 Aligned_cols=51 Identities=4% Similarity=0.003 Sum_probs=37.6
Q ss_pred ccccc-cccccccccCCCCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHh
Q psy1631 19 HFGLG-LWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVAL 69 (77)
Q Consensus 19 NFFnG-iWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L 69 (77)
++|+. .=..+.+++--...|..|..|-+..|-.+...++|.+.|......|
T Consensus 43 ~~F~~~f~~~~~~~l~~n~~~~~h~~~v~~~l~~~v~~ldd~~~l~~~l~~L 94 (152)
T 3pt8_B 43 TPFKSLFQNVSFNQMTNHPTMKAQSLVFCNGMSSFVDNLDDHEVLVVLLQKM 94 (152)
T ss_dssp GGGTTTTTTCCHHHHTTCHHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHH
T ss_pred HHhhHHHcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 45554 3334556665666899999999999999999999998766555554
No 14
>1ith_A Hemoglobin (cyano Met); oxygen transport; HET: HEM; 2.50A {Urechis caupo} SCOP: a.1.1.2
Probab=44.98 E-value=34 Score=21.24 Aligned_cols=40 Identities=10% Similarity=0.145 Sum_probs=33.7
Q ss_pred ccccccccccccccCCCCchhHHHHHHHHHHHHHHHhcCc
Q psy1631 19 HFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKD 58 (77)
Q Consensus 19 NFFnGiWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D 58 (77)
++|+..=.++.+++...+.|..|..|-+.-|-.+...++|
T Consensus 42 ~~F~~~~~~~~~~l~~~~~~~~h~~~v~~al~~~v~~ld~ 81 (141)
T 1ith_A 42 AFFHKFSSVPLYGLRSNPAYKAQTLTVINYLDKVVDALGG 81 (141)
T ss_dssp GGCTTTTTSCGGGGGGCHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHhHhhcCCCHHHHhhCHHHHHHHHHHHHHHHHHHHHccc
Confidence 4666544567788888889999999999999999999998
No 15
>3lb2_A Dehaloperoxidase A; globin, oxidoreductase; HET: HEM; 1.06A {Amphitrite ornata} SCOP: a.1.1.2 PDB: 1ewa_A* 1ew6_A* 2qfk_A* 3kun_A* 3lb1_A* 3dr9_A* 3lb3_A* 3lb4_A* 3mou_A* 3ord_A* 3mym_A* 3k3u_A* 3o7n_A* 3kuo_A* 2qfn_A* 3myn_A* 3oj1_A* 3ok5_A* 3ixf_A*
Probab=43.88 E-value=24 Score=22.68 Aligned_cols=51 Identities=16% Similarity=0.199 Sum_probs=36.7
Q ss_pred ccccccccccccccCCCCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHh
Q psy1631 19 HFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVAL 69 (77)
Q Consensus 19 NFFnGiWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L 69 (77)
.+|...=.++.++|.....|.+|-.|=+.-|-+++..++|.+.|-....+|
T Consensus 33 ~~F~~f~~~s~~~l~~n~~~~aHg~kV~~al~~~v~~ldd~~~l~~~l~~L 83 (137)
T 3lb2_A 33 RYFKNYVGKSDQELKSMAKFGDHTEKVFNLMMEVADRATDCVPLASDANTL 83 (137)
T ss_dssp GGCTTTTTCCCC-CTTSHHHHHHHHHHHHHHHHHHHHCBTTBCCHHHHHHH
T ss_pred HHhHHcCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Confidence 345433245668888889999999999999999999999955544433333
No 16
>2c0k_A Hemoglobin; oxygen transport, heme, iron, metal-binding; HET: HEM; 2.6A {Gasterophilus intestinalis}
Probab=42.52 E-value=24 Score=22.37 Aligned_cols=52 Identities=19% Similarity=0.186 Sum_probs=39.9
Q ss_pred ccccccccccccccCCCCchhHHHHHHHHHHHHHHHhcC---cHhHHHHHHHHhc
Q psy1631 19 HFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIK---DAKTLMDIAVALK 70 (77)
Q Consensus 19 NFFnGiWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~---D~~tLl~l~~~L~ 70 (77)
++|+..=..+.+++.-...|.+|..|-+.-|-++...++ |.+.|.....+|.
T Consensus 40 ~~F~~f~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ld~~~~~~~l~~~l~~L~ 94 (151)
T 2c0k_A 40 NHFPWFKEIPFDDLPENARFKTHGTRILRQVDEGVKALSVDFGDKKFDDVWKKLA 94 (151)
T ss_dssp GGCHHHHTSCGGGGGGCHHHHHHHHHHHHHHHHHHHTCCGGGCCHHHHHHHHHHH
T ss_pred HHHHHhCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHcCCcCCHHHHHHHHHHHH
Confidence 466532245667787777999999999999999999999 8877766665554
No 17
>1hlb_A Hemoglobin (deoxy); oxygen transport; HET: HEM; 2.50A {Caudina arenicola} SCOP: a.1.1.2
Probab=37.54 E-value=16 Score=23.19 Aligned_cols=50 Identities=12% Similarity=0.149 Sum_probs=36.6
Q ss_pred ccccccccccccccCCCCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHh
Q psy1631 19 HFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVAL 69 (77)
Q Consensus 19 NFFnGiWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L 69 (77)
++|+..=.++.++|.....|..|..|-+.-|-.+...++| +.|......|
T Consensus 52 ~~F~~~~~~~~~~l~~n~~~~~h~~~v~~al~~~v~~ld~-~~l~~~l~~L 101 (158)
T 1hlb_A 52 NKFPQMAGMSASQLRSSRQMQAHAIRVSSIMSEYVEELDS-DILPELLATL 101 (158)
T ss_dssp HTSGGGTTCCHHHHTTCHHHHHHHHHHHHHHHHHHTTCCT-TSHHHHTHHH
T ss_pred HHhhhhcCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHCCc-HHHHHHHHHH
Confidence 3554432345677778889999999999999999999999 6555444333
No 18
>3mhs_C SAGA-associated factor 11; multi-protein complex, hydrolase-transcription regulator-Pro binding complex, acetylation, cytoplasm; 1.89A {Saccharomyces cerevisiae} PDB: 3m99_B 3mhh_C 4fjc_C 4fk5_C 4fip_C 2lo2_A 3kjl_E 3kik_E
Probab=36.14 E-value=13 Score=24.48 Aligned_cols=12 Identities=25% Similarity=0.537 Sum_probs=10.1
Q ss_pred CCchhHHHHHHH
Q psy1631 35 PGSFAYHMSRSI 46 (77)
Q Consensus 35 PGsFa~Hm~Rsv 46 (77)
+|-||.|+.||.
T Consensus 82 a~RFApHLeKCm 93 (99)
T 3mhs_C 82 ANRLAAHLQRCL 93 (99)
T ss_dssp GGGHHHHHHHHS
T ss_pred hhhhHHHHHHHH
Confidence 368999999995
No 19
>3hhs_A Propo-P2, phenoloxidase subunit 2; alpha helix, beta strand, melanin biosynthesis, metal-bindin monooxygenase, oxidoreductase, secreted; 1.97A {Manduca sexta}
Probab=33.53 E-value=60 Score=27.06 Aligned_cols=46 Identities=20% Similarity=0.331 Sum_probs=35.5
Q ss_pred cccccccccCCCCch----------------hHHHHHHHHHHHHHHHhc--CcHhHHHHHHHHhc
Q psy1631 24 LWRTPIADLDRPGSF----------------AYHMSRSIHLVVDLLSEI--KDAKTLMDIAVALK 70 (77)
Q Consensus 24 iWriPv~dIDRPGsF----------------a~Hm~Rsv~LLl~vL~e~--~D~~tLl~l~~~L~ 70 (77)
.=+||+.+++|+..+ ..|. +-...|.++|-.- +|++++.+.|...+
T Consensus 58 ~~~~~~~~~~~~~~l~~~~~Lprg~~FS~f~~~H~-eeA~~Lf~~fy~a~~kD~dtF~~~A~~aR 121 (694)
T 3hhs_A 58 SRKIILKNLDKIPEFPKAKQLPNDADFSLFLPSHQ-EMANEVIDVLMSVTENQLQELLSTCVYAR 121 (694)
T ss_dssp CEEEECCCCSSCCCCTTGGGSCTTSCCCTTSHHHH-HHHHHHHHHHHHSCTTCHHHHHHHHHHHH
T ss_pred cccccccccccCccccccccCCCCCcccCCCHHHH-HHHHHHHHHHHhCcCCCHHHHHHHHHHHH
Confidence 348999999965544 3344 5566788999999 99999999998765
No 20
>4b4y_A Neuroglobin; transport protein, nervous system evolution, globin evolutio cnidarian, metazoan; HET: HEM; 2.30A {Symsagittifera roscoffensis}
Probab=33.23 E-value=26 Score=22.28 Aligned_cols=53 Identities=11% Similarity=0.030 Sum_probs=38.3
Q ss_pred cccccccccc-ccccCCCCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHhcc
Q psy1631 19 HFGLGLWRTP-IADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVALKD 71 (77)
Q Consensus 19 NFFnGiWriP-v~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L~r 71 (77)
++|+..=..+ .+++.....|.+|..|-+.-|-.+...++|.+.|.....+|.+
T Consensus 48 ~~F~~~~~~~~~~~l~~~~~~~~H~~~v~~~l~~~v~~ld~~~~l~~~l~~L~~ 101 (154)
T 4b4y_A 48 QIFPWADASKTAKEMRSHPRFKSHAKSIGKVISDCLVDLNGVKKHEPKLSSLGA 101 (154)
T ss_dssp HHSTTCCTTSCHHHHTTSHHHHHHHHHHHHHHHHHHTTGGGGGGGHHHHGGGGG
T ss_pred HHhHHhcCCCcHHHHHcCHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHH
Confidence 4555321232 3455556679999999999999999999999987776666654
No 21
>3esg_A HUTD, putative uncharacterized protein; beta barrel, unknown function; 1.80A {Pseudomonas fluorescens} SCOP: b.82.1.0
Probab=32.66 E-value=7.4 Score=27.70 Aligned_cols=17 Identities=41% Similarity=0.816 Sum_probs=15.7
Q ss_pred cccccccccCCCCchhH
Q psy1631 24 LWRTPIADLDRPGSFAY 40 (77)
Q Consensus 24 iWriPv~dIDRPGsFa~ 40 (77)
-|||-+++|+.+|.|+.
T Consensus 46 ~wRiSiA~V~~~g~FS~ 62 (193)
T 3esg_A 46 GWRLSIADIGESGGFSS 62 (193)
T ss_dssp SEEEEEEEECSSEECCC
T ss_pred eEEEEEEEEcCCCCCCC
Confidence 69999999999999974
No 22
>3g46_A Globin-1; oxygen transport, allostery, oxygen affinity, cytoplasm, heme, iron, metal-binding, oxygen storage/transport, oxygen binding; HET: HEM; 0.91A {Scapharca inaequivalvis} SCOP: a.1.1.2 PDB: 1nxf_A* 3g4q_A* 3g4r_A* 3g4u_A* 3g4v_A* 3g4w_A* 3g4y_A* 3g52_A* 3g53_A* 3uhg_A* 3uhs_A* 3uhk_A* 3uhi_A* 3uhn_A* 3ugy_A* 2auo_A* 2aup_A* 3uhr_A* 3uh5_A* 3uh3_A* ...
Probab=31.71 E-value=79 Score=19.81 Aligned_cols=51 Identities=6% Similarity=0.032 Sum_probs=36.4
Q ss_pred ccccccccccccccCCCCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHhcc
Q psy1631 19 HFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVALKD 71 (77)
Q Consensus 19 NFFnGiWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L~r 71 (77)
++|+..=.++.++ ....|..|..|-+.-|-.+...++|.+.|......|.+
T Consensus 49 ~~F~~~~~~~~~~--~n~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~l~~ 99 (146)
T 3g46_A 49 GYFKRLGDVSQGM--ANDKLRGHSITLMYALQNFIDQLDNPDDLVCVVEKFAV 99 (146)
T ss_dssp GGGGGGCCGGGGG--GCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCCcc--cCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4665332333333 34479999999999999999999998877776666543
No 23
>4hrt_A Globin-2 A chain; oxygen transport, globin fold, oxygen; HET: HEM; 1.46A {Scapharca inaequivalvis} PDB: 1sct_A*
Probab=31.12 E-value=81 Score=19.89 Aligned_cols=36 Identities=8% Similarity=0.082 Sum_probs=30.7
Q ss_pred CchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHhcc
Q psy1631 36 GSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVALKD 71 (77)
Q Consensus 36 GsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L~r 71 (77)
..|.+|..|-+.-|-.+...++|...|..+..+|-+
T Consensus 65 ~~~~~H~~~v~~al~~~v~~ldd~~~L~~~l~~l~~ 100 (150)
T 4hrt_A 65 SKLRGHAITLTYALNNFVDSLDDPSRLKCVVEKFAV 100 (150)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 478999999999999999999999888877766643
No 24
>4akr_A F-actin-capping protein subunit alpha; actin-binding protein; 2.20A {Dictyostelium discoideum}
Probab=30.62 E-value=11 Score=27.95 Aligned_cols=11 Identities=36% Similarity=0.591 Sum_probs=9.5
Q ss_pred ccccccccccc
Q psy1631 16 SVVHFGLGLWR 26 (77)
Q Consensus 16 nktNFFnGiWr 26 (77)
|-.||.||-||
T Consensus 158 np~NFwnGrWr 168 (281)
T 4akr_A 158 KPNAFYSGRWR 168 (281)
T ss_dssp EGGGTEEEEEE
T ss_pred CcccccCCceE
Confidence 56799999988
No 25
>4hrt_B Hemoglobin B chain; oxygen transport, globin fold, oxygen; HET: HEM; 1.46A {Scapharca inaequivalvis} PDB: 1sct_B*
Probab=30.33 E-value=71 Score=20.17 Aligned_cols=50 Identities=8% Similarity=0.018 Sum_probs=34.5
Q ss_pred ccccccccccccccCCCCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHhc
Q psy1631 19 HFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVALK 70 (77)
Q Consensus 19 NFFnGiWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L~ 70 (77)
++|+..=..+.++ -...|..|..|-+.-|..+...++|.+.|......|.
T Consensus 52 ~~F~~f~~~~~~~--~~~~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~ 101 (152)
T 4hrt_B 52 GKFARLGDVSAGK--DNSKLRGHSITLMYALQNFVDALDDVERLKCVVEKFA 101 (152)
T ss_dssp HHTGGGCCCC-----CCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HhhHHhCCCCccc--cCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4565432334333 3447899999999999999999999887766665554
No 26
>2lhb_A Hemoglobin V (cyano Met); oxygen transport; HET: HEM; 2.00A {Petromyzon marinus} SCOP: a.1.1.2 PDB: 3lhb_A* 1f5o_A* 1f5p_A* 1uc3_A*
Probab=29.41 E-value=52 Score=20.62 Aligned_cols=51 Identities=18% Similarity=0.229 Sum_probs=36.3
Q ss_pred ccccccccc-cccccCCCCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHh
Q psy1631 19 HFGLGLWRT-PIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVAL 69 (77)
Q Consensus 19 NFFnGiWri-Pv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L 69 (77)
++|+..=.. |.+++.....|.+|..|-+.-|-++...++|-+.|......|
T Consensus 50 ~~F~~~~~~~~~~~l~~~~~~~~h~~~v~~~l~~~v~~ldd~~~l~~~l~~L 101 (149)
T 2lhb_A 50 EFFPKFKGLTTADELKKSADVRWHAERIINAVDDAVASMDDTEKMSMKLRNL 101 (149)
T ss_dssp GGCGGGTTCCSHHHHHTCHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHhhhhcCCCCHHHHhCCHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 466532122 345666778999999999999999999999966665544444
No 27
>2nrl_A Myoglobin; transport protein; HET: HEM; 0.91A {Thunnus atlanticus} PDB: 2nx0_A* 3qm5_A* 3qm6_A* 3qm7_A* 3qm8_A* 3qm9_A* 3qma_A* 1myt_A* 2nrm_A*
Probab=28.22 E-value=97 Score=19.39 Aligned_cols=43 Identities=12% Similarity=0.058 Sum_probs=34.2
Q ss_pred ccccccccccccccCCCCchhHHHHHHHHHHHHHHHhcCcHhH
Q psy1631 19 HFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKT 61 (77)
Q Consensus 19 NFFnGiWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D~~t 61 (77)
++|+..=..+.++|.-...|..|..|-+.-|..+...++|.+.
T Consensus 38 ~~F~~f~~~~~~~l~~n~~~~~h~~~v~~al~~~v~~ldd~~~ 80 (147)
T 2nrl_A 38 KLFPKFAGIAQADIAGNAAVSAHGATVLKKLGELLKAKGSHAA 80 (147)
T ss_dssp TTCTTTTTCCGGGTTTCHHHHHHHHHHHHHHHHHHHCSSCHHH
T ss_pred HHhhhhcCCCHHHHcCCHHHHHHHHHHHHHHHHHHHhcCCHHH
Confidence 3554332446778888889999999999999999999999763
No 28
>2ia7_A Tail lysozyme, putative; NP_952040.1, putative tail lysozyme, structural genomics, JO center for structural genomics, JCSG; 1.44A {Geobacter sulfurreducens} SCOP: d.373.1.1
Probab=28.10 E-value=30 Score=21.82 Aligned_cols=35 Identities=17% Similarity=0.396 Sum_probs=11.8
Q ss_pred cccc-cccccccccccccCCCCch-----hHHHHHHHHHHHH
Q psy1631 16 SVVH-FGLGLWRTPIADLDRPGSF-----AYHMSRSIHLVVD 51 (77)
Q Consensus 16 nktN-FFnGiWriPv~dIDRPGsF-----a~Hm~Rsv~LLl~ 51 (77)
||.+ |..-=|..|+ .+|+-|.. ..|+..||..+|-
T Consensus 3 ~~~~~flg~g~~fp~-~~~~~g~~~~~~~~~~I~qsI~~iL~ 43 (134)
T 2ia7_A 3 TKAREFLGTGWKFPV-AAGADGAMVLSSAEEDIAESIRIILG 43 (134)
T ss_dssp ----------------------CCCCCCHHHHHHHHHHHHHT
T ss_pred cccccccccCccCCc-eeCCCCCeEEeccHHHHHHHHHHHHC
Confidence 6667 6656699999 57766644 6799999998873
No 29
>2ys2_A Cytoplasmic tyrosine-protein kinase BMX; bone marrow tyrosine kinase gene in chromosome X protein, epithelial and endothelial tyrosine kinase, ETK; NMR {Homo sapiens}
Probab=27.35 E-value=19 Score=20.82 Aligned_cols=11 Identities=36% Similarity=0.440 Sum_probs=8.2
Q ss_pred ccccccccccc
Q psy1631 3 TLLDTYHPQSC 13 (77)
Q Consensus 3 ~~~~~~~~~fc 13 (77)
.++..|||-|-
T Consensus 10 ~~l~~YHPg~~ 20 (50)
T 2ys2_A 10 HLLVKYHSGFF 20 (50)
T ss_dssp CCSCCCCSSCE
T ss_pred chhhhcCCCcc
Confidence 36789999764
No 30
>1yll_A PA5104, conserved hypothetical protein; structural genomics, beta-BA PSI, protein structure initiative, midwest center for struc genomics; 1.64A {Pseudomonas aeruginosa} SCOP: b.82.1.17
Probab=27.22 E-value=10 Score=26.77 Aligned_cols=17 Identities=41% Similarity=0.755 Sum_probs=15.5
Q ss_pred cccccccccCCCCchhH
Q psy1631 24 LWRTPIADLDRPGSFAY 40 (77)
Q Consensus 24 iWriPv~dIDRPGsFa~ 40 (77)
-|||-+++|+..|.|+.
T Consensus 41 ~wRiSiA~V~~~g~FS~ 57 (200)
T 1yll_A 41 GWRLSIADVGESGGFSG 57 (200)
T ss_dssp SEEEEEEEECSCEEECC
T ss_pred eEEEEEEEeccCCCCCC
Confidence 59999999999999974
No 31
>2xki_A Neural hemoglobin; oxygen storage, metal-binding; HET: HEM SO4; 1.30A {Cerebratulus lacteus} PDB: 1kr7_A* 1v07_A* 2xkg_A* 2xkh_A* 2vyz_A* 2vyy_A*
Probab=26.44 E-value=85 Score=19.06 Aligned_cols=45 Identities=9% Similarity=0.175 Sum_probs=33.2
Q ss_pred ccccccccccccccCCCCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHH
Q psy1631 19 HFGLGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAV 67 (77)
Q Consensus 19 NFFnGiWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~ 67 (77)
.+| ..=..+.+++-.+..|.+|..|=+.-|-+++. +|. +|-+|+.
T Consensus 24 ~~F-~f~~~~~~~~~~s~~~~~H~~~v~~~l~~~v~--dd~-~l~~L~~ 68 (110)
T 2xki_A 24 NKF-GFKGVALGSLKGNAAYKTQAGKTVDYINAAIG--GSA-DAAGLAS 68 (110)
T ss_dssp GGS-TTTTCCGGGGGGCHHHHHHHHHHHHHHHHHHH--TCC-CHHHHHH
T ss_pred HHC-CCCCCCHHHHccCHHHHHHHHHHHHHHHHHHC--CCH-HHHHHHH
Confidence 355 33335777777788999999999988888888 666 6666654
No 32
>3mvc_A Globin protein 6; oxygen sensor, heme-binding protein, C. elegans, OXY transport, electron transport; HET: HEM; 1.40A {Caenorhabditis elegans}
Probab=26.32 E-value=86 Score=20.27 Aligned_cols=35 Identities=11% Similarity=0.106 Sum_probs=30.6
Q ss_pred chhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHhcc
Q psy1631 37 SFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVALKD 71 (77)
Q Consensus 37 sFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L~r 71 (77)
.|.+|..|-+..|-.+...++|.+.|......|.+
T Consensus 56 ~~~~Ha~rv~~~l~~~V~~Ldd~~~l~~~L~~LG~ 90 (161)
T 3mvc_A 56 RLKKHAQLFTVLMDDLIANLDSPSATVAGLREAGE 90 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 59999999999999999999999988887777654
No 33
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=25.88 E-value=43 Score=23.52 Aligned_cols=19 Identities=16% Similarity=0.356 Sum_probs=16.1
Q ss_pred hhHHHHHHHHHHHHHHHhc
Q psy1631 38 FAYHMSRSIHLVVDLLSEI 56 (77)
Q Consensus 38 Fa~Hm~Rsv~LLl~vL~e~ 56 (77)
..+|..|++..+++.|+++
T Consensus 369 ~~YH~~~~~~~~~~~~~~~ 387 (388)
T 2gz6_A 369 GCFHVPRAMYLCWQQFEAL 387 (388)
T ss_dssp SSSHHHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHHHHhh
Confidence 7899999999888887664
No 34
>1juq_A ADP-ribosylation factor binding protein GGA3; protein-peptide compelx, VHS domain, DXXLL sorting signal, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.9.2 PDB: 1jpl_A 1lf8_A*
Probab=21.85 E-value=28 Score=23.53 Aligned_cols=40 Identities=18% Similarity=0.209 Sum_probs=24.0
Q ss_pred CchhHHHHHHHHHHHHHHHh----cCcHhHHHHHHHHhccCCCC
Q psy1631 36 GSFAYHMSRSIHLVVDLLSE----IKDAKTLMDIAVALKDEPEA 75 (77)
Q Consensus 36 GsFa~Hm~Rsv~LLl~vL~e----~~D~~tLl~l~~~L~r~Pd~ 75 (77)
|.|+.|...++.-+++-+-. --||...++|+-+++.+|+.
T Consensus 4 g~~~~~~~s~~~~~IekATs~~l~~~Dw~~ileicD~I~~~~~~ 47 (171)
T 1juq_A 4 GSMAEAEGESLESWLNKATNPSNRQEDWEYIIGFCDQINKELEG 47 (171)
T ss_dssp --------CCHHHHHHHHTCTTCSSCCHHHHHHHHHHHHHSTTH
T ss_pred ccCCCCCCCcHHHHHHHHcCCCCCCcCHHHHHHHHHHHHcCCcc
Confidence 66777777777666654433 46999999999999888763
No 35
>2lxl_A Vacuolar protein sorting-associated protein VTA1; MIT, protein transport; NMR {Homo sapiens} PDB: 2lxm_A
Probab=21.73 E-value=49 Score=22.92 Aligned_cols=30 Identities=20% Similarity=0.396 Sum_probs=24.4
Q ss_pred ccCCCCch---hHHHHHHHHHHHHHHHhcCcHh
Q psy1631 31 DLDRPGSF---AYHMSRSIHLVVDLLSEIKDAK 60 (77)
Q Consensus 31 dIDRPGsF---a~Hm~Rsv~LLl~vL~e~~D~~ 60 (77)
.-||.|.| ...+..+...+++||..+++.+
T Consensus 103 ~~dRa~~~t~~~~k~F~aA~~f~eVL~~fg~l~ 135 (183)
T 2lxl_A 103 NEDRAGRFHKNMIKSFYTASLLIDVITVFGELT 135 (183)
T ss_dssp HHHHTTCCCHHHHHHHHHHHHHHHHHHTTSCCC
T ss_pred HHhhccchhHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 34789988 5667779999999999998854
No 36
>2zs0_A Extracellular giant hemoglobin major globin subun; annelida, magnesium, cooperativity, heme, iron, binding, oxygen transport, secreted; HET: HEM; 1.60A {Oligobrachia mashikoi} PDB: 2d2n_A* 2d2m_A* 2zfo_A* 2zs1_A*
Probab=21.65 E-value=1.2e+02 Score=18.66 Aligned_cols=36 Identities=19% Similarity=0.235 Sum_probs=28.9
Q ss_pred CCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHhc
Q psy1631 35 PGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVALK 70 (77)
Q Consensus 35 PGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L~ 70 (77)
...|.+|..|-+.-|-.+...++|...|......|.
T Consensus 56 ~~~~~~h~~~v~~al~~~v~~ld~~~~l~~~l~~L~ 91 (140)
T 2zs0_A 56 SAAFTAHCLRVTGALNRLISQLDQQATINADLAHLA 91 (140)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 447999999999999999999999777665555443
No 37
>2kfs_A Conserved hypothetical regulatory protein; WHTH, DNA binding, phosphorylation, DNA-binding protein; NMR {Mycobacterium tuberculosis}
Probab=21.60 E-value=62 Score=22.23 Aligned_cols=40 Identities=15% Similarity=0.239 Sum_probs=27.9
Q ss_pred cccccccccccCCCCchhHHHHHHHHHHHHHHHh--cCcHhHHHHH
Q psy1631 22 LGLWRTPIADLDRPGSFAYHMSRSIHLVVDLLSE--IKDAKTLMDI 65 (77)
Q Consensus 22 nGiWriPv~dIDRPGsFa~Hm~Rsv~LLl~vL~e--~~D~~tLl~l 65 (77)
.|.||||...++-.|.-- +++.=++.+|+. .+|.+.+--+
T Consensus 63 Gr~~rVP~~f~~~~g~vv----~~L~G~l~vL~D~G~~d~e~~~wL 104 (148)
T 2kfs_A 63 AGGVVIPQVFFTNSGQVV----KSLPGLLTILHDGGYRDTEIMRWL 104 (148)
T ss_dssp TTEEEEEGGGBCTTSCBC----TTHHHHHHHHHHTTCCHHHHHHHH
T ss_pred CCEEEecHHHhccCCCcc----CCCccHHHHHhcCCCCHHHHHHHh
Confidence 389999999997656433 555668888886 4566665544
No 38
>2lr8_A CAsp8-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology, apoptosis; NMR {Homo sapiens}
Probab=26.26 E-value=21 Score=22.36 Aligned_cols=18 Identities=28% Similarity=0.418 Sum_probs=15.5
Q ss_pred HhHHHHHHHHhccCCCCC
Q psy1631 59 AKTLMDIAVALKDEPEAE 76 (77)
Q Consensus 59 ~~tLl~l~~~L~r~Pd~~ 76 (77)
-++...||.+|.|+|+|=
T Consensus 36 ~~tfa~iA~~Lnks~~QV 53 (70)
T 2lr8_A 36 SKTFAYLAAKLDKNPNQV 53 (70)
Confidence 578899999999999874
No 39
>2ls0_1 Zoocin A endopeptidase; specificity, hydrolase; NMR {Streptococcus equi subsp}
Probab=20.61 E-value=25 Score=24.23 Aligned_cols=23 Identities=22% Similarity=0.323 Sum_probs=15.7
Q ss_pred ccccccccccccccccccCCCCch
Q psy1631 15 TSVVHFGLGLWRTPIADLDRPGSF 38 (77)
Q Consensus 15 rnktNFFnGiWriPv~dIDRPGsF 38 (77)
-+.--|-||||+|-.+.+- |-.|
T Consensus 26 vDelk~VNGIWQv~n~~L~-p~dF 48 (128)
T 2ls0_1 26 VDDLQKINGIWQVRNNILV-PTDF 48 (128)
T ss_dssp CSCCEEETTEEEECCTTTC-SSCC
T ss_pred ecceeeecceEEEEeceec-CCCC
Confidence 3556688999998766655 4444
No 40
>1x9f_C Erythrocruorin, globin III, extracellular, globin C; crystal, dodecamer, allosteric, oxygen storage/transport complex; HET: HEM; 2.60A {Lumbricus terrestris} SCOP: a.1.1.2 PDB: 2gtl_C*
Probab=20.50 E-value=1.3e+02 Score=18.81 Aligned_cols=35 Identities=17% Similarity=0.101 Sum_probs=28.3
Q ss_pred CCchhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHh
Q psy1631 35 PGSFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVAL 69 (77)
Q Consensus 35 PGsFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L 69 (77)
...|.+|..|-+.-|-.+...++|.+.|......|
T Consensus 64 ~~~~~~h~~~v~~~l~~~v~~ldd~~~l~~~l~~L 98 (153)
T 1x9f_C 64 GPKFSAHALRILNGLDLAINLLDDPPALDAALDHL 98 (153)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 44799999999999999999999977666555544
No 41
>2kzv_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; NMR {Chromobacterium violaceum}
Probab=20.49 E-value=72 Score=19.88 Aligned_cols=33 Identities=9% Similarity=0.171 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhcCc---HhHHHHHHHHhcc-CCCCC
Q psy1631 44 RSIHLVVDLLSEIKD---AKTLMDIAVALKD-EPEAE 76 (77)
Q Consensus 44 Rsv~LLl~vL~e~~D---~~tLl~l~~~L~r-~Pd~~ 76 (77)
+.+.||.+...++.| |-.|-.|..+|.| .||-+
T Consensus 8 ~l~~ll~~Ai~~~~dedGWa~Lg~vG~~i~k~~PdFD 44 (92)
T 2kzv_A 8 PLQDMFTSAIEAVARDSGWAELSAVGSYLAKNDPSFD 44 (92)
T ss_dssp SHHHHHHHHHHHHTTTTSSCBHHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHHHHhcCCCCcEeHHHHHHHHHHhCcCCC
Confidence 345667776666655 8899999999999 58754
No 42
>1yhu_A Hemoglobin A1 chain; globin fold, oxygen storage-transport complex; HET: HEM; 3.15A {Riftia pachyptila}
Probab=20.39 E-value=1.2e+02 Score=19.05 Aligned_cols=34 Identities=24% Similarity=0.275 Sum_probs=29.1
Q ss_pred chhHHHHHHHHHHHHHHHhcCcHhHHHHHHHHhc
Q psy1631 37 SFAYHMSRSIHLVVDLLSEIKDAKTLMDIAVALK 70 (77)
Q Consensus 37 sFa~Hm~Rsv~LLl~vL~e~~D~~tLl~l~~~L~ 70 (77)
.|..|..|-+.-|-.+...++|.+.|.....+|.
T Consensus 58 ~~~~h~~~v~~al~~~v~~ldd~~~l~~~l~~L~ 91 (145)
T 1yhu_A 58 EFKAHIARVLGGLDRVISMLDNQATLDADLAHLK 91 (145)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Confidence 6999999999999999999999998766655553
Done!