BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16310
(1493 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9GZR7|DDX24_HUMAN ATP-dependent RNA helicase DDX24 OS=Homo sapiens GN=DDX24 PE=1 SV=1
Length = 859
Score = 382 bits (982), Expect = e-105, Method: Compositional matrix adjust.
Identities = 206/453 (45%), Positives = 293/453 (64%), Gaps = 26/453 (5%)
Query: 792 TKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTE----------- 840
T I+S +PS DI A +G T++ +L G + E P+
Sbjct: 302 TVIESEALPS------DIAAEARAKTGGTVS-DQALLFGDDDAGEGPSSLIREKPVPKQN 354
Query: 841 EDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQNHILDAG 900
E+E ++ +E+ + +EL+++SA + K+ L L+L PTRELA+QV+ HI
Sbjct: 355 ENEEENLDKEQTGNLKQELDDKSATCKAYPKRP---LLGLVLTPTRELAVQVKQHIDAVA 411
Query: 901 KYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVID 960
++T +K A +VGGMST+KQ R+LN+ P I+VATPGRLWE I+ H+HL L ++ LV+D
Sbjct: 412 RFTGIKTAILVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVD 471
Query: 961 ETDRMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLT--HSLKNSLNLKKGQSKSKK 1018
E DRM+E GHF EL +L+ + ++ + RQT VFSATLT H + KK K K
Sbjct: 472 EADRMVEKGHFAELSQLLEMLNDSQYNPKRQTLVFSATLTLVHQAPARILHKKHTKKMDK 531
Query: 1019 VSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPG 1078
+K D +Q + PK++DLT +TLTE+KI C+ DEKD YLYYF++Q+PG
Sbjct: 532 TAKLD---LLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFLMQYPG 588
Query: 1079 RTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAA 1138
R+LVF NSIS +KRL+ LL +L PL LHA M+Q+QRL+NL++F + +LLATDVAA
Sbjct: 589 RSLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQFARLEDCVLLATDVAA 648
Query: 1139 RGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEK 1198
RGLDIP ++HVIHY VPRTSEIY+HRSGRTARA NEGL+L+LI +++ + K++ +L+K
Sbjct: 649 RGLDIPKVQHVIHYQVPRTSEIYVHRSGRTARATNEGLSLMLIGPEDVINFKKIYKTLKK 708
Query: 1199 KVDLPDFPIDESVLSLIKKRIDLAKSIEYLESK 1231
D+P FP+ + ++K+RI LA+ IE E +
Sbjct: 709 DEDIPLFPVQTKYMDVVKERIRLARQIEKSEYR 741
Score = 318 bits (816), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 191/492 (38%), Positives = 267/492 (54%), Gaps = 110/492 (22%)
Query: 175 TKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTE----------- 223
T I+S +PS DI A +G T++ +L G + E P+
Sbjct: 302 TVIESEALPS------DIAAEARAKTGGTVS-DQALLFGDDDAGEGPSSLIREKPVPKQN 354
Query: 224 EDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQNHILDAG 283
E+E ++ +E+ + +EL+++SA + K+ L L+L PTRELA+QV+ HI
Sbjct: 355 ENEEENLDKEQTGNLKQELDDKSATCKAYPKRP---LLGLVLTPTRELAVQVKQHIDAVA 411
Query: 284 KYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVID 343
++T +K A +VGGMST+KQ R+LN+ P I+VATPGRLWE I+ H+HL L ++ LV+D
Sbjct: 412 RFTGIKTAILVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVD 471
Query: 344 ETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNILDRVTMTETSQPRQT 403
E DRM+E G HF EL +L+ + ++ + RQT
Sbjct: 472 EADRMVEKG----------------------------HFAELSQLLEMLNDSQYNPKRQT 503
Query: 404 FVFSAT--LTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGIT 461
VFSAT L H + KK K K + K+ L +KIG+
Sbjct: 504 LVFSATLTLVHQAPARILHKKHTKKMDKTA------------------KLDLLMQKIGMR 545
Query: 462 KTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDLLNIKSPKIVDLTEKIGITKTLT 521
PK++DLT +TLT
Sbjct: 546 G-----------------------------------------KPKVIDLTRNEATVETLT 564
Query: 522 ESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQR 581
E+KI C+ DEKD YLYYF++Q+PGR+LVF NSIS +KRL+ LL +L PL LHA M+Q+
Sbjct: 565 ETKIHCETDEKDFYLYYFLMQYPGRSLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQK 624
Query: 582 QRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNE 641
QRL+NL++F + +LLATDVAARGLDIP ++HVIHY VPRTSEIY+HRSGRTARA NE
Sbjct: 625 QRLRNLEQFARLEDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYVHRSGRTARATNE 684
Query: 642 GLTVVLIESDEI 653
GL+++LI +++
Sbjct: 685 GLSLMLIGPEDV 696
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Query: 1240 WLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRID 1299
++HRSGRTARA NEGL+L+LI +++ + K++ +L+K D+P FP+ + ++K+RI
Sbjct: 671 YVHRSGRTARATNEGLSLMLIGPEDVINFKKIYKTLKKDEDIPLFPVQTKYMDVVKERIR 730
Query: 1300 LAKSIEYLESK-IKKNRPDNWLEKAAKDMDIIIDDE 1334
LA+ IE E + + ++W+E+AA ++I ++++
Sbjct: 731 LARQIEKSEYRNFQACLHNSWIEQAAAALEIELEED 766
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 45/59 (76%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGAL 1414
L+L PTRELA+QV+ HI ++T +K A +VGGMST+KQ R+LN+ P I+VATPG L
Sbjct: 390 GLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQRMLNRRPEIVVATPGRL 448
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 145 DMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTL 204
D ++ W +P ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTL
Sbjct: 186 DQKADVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTL 245
Query: 205 AFGIPILTGIVN 216
AF IP++ ++
Sbjct: 246 AFAIPMIHAVLQ 257
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 45/72 (62%)
Query: 762 DMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTL 821
D ++ W +P ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTL
Sbjct: 186 DQKADVSAWKDLFVPRPVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTL 245
Query: 822 AFGIPILTGIVN 833
AF IP++ ++
Sbjct: 246 AFAIPMIHAVLQ 257
>sp|Q5RDL2|DDX24_PONAB ATP-dependent RNA helicase DDX24 OS=Pongo abelii GN=DDX24 PE=2 SV=1
Length = 859
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 205/453 (45%), Positives = 292/453 (64%), Gaps = 26/453 (5%)
Query: 792 TKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTE----------- 840
T I+S +PS D A +G T++ +L G + E P+
Sbjct: 302 TVIESEALPS------DTAAEARAKTGGTVS-DQALLFGDDDAGEGPSSLIREKPVPKQN 354
Query: 841 EDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQNHILDAG 900
E+E ++ +E+ + +EL+++SA + K+ L L+L PTRELA+QV+ HI
Sbjct: 355 ENEEENLDKEQTGNLKQELDDKSATCKTYPKRP---LLGLVLTPTRELAVQVKQHIDAVA 411
Query: 901 KYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVID 960
++T +K A +VGGMST+KQ R+LN+ P I+VATPGRLWE I+ H+HL L ++ LV+D
Sbjct: 412 RFTGIKTAILVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVD 471
Query: 961 ETDRMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLT--HSLKNSLNLKKGQSKSKK 1018
E DRM+E GHF EL +L+ + ++ + RQT VFSATLT H + KK K K
Sbjct: 472 EADRMVEKGHFAELSQLLEMLNDSQYNPKRQTLVFSATLTLVHQAPARILHKKHTKKMDK 531
Query: 1019 VSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPG 1078
+K D +Q + PK++DLT +TLTE+KI C+ DEKD YLYYF++Q+PG
Sbjct: 532 TAKLD---LLMQKIGMRGKPKVIDLTRNEATVETLTETKIHCETDEKDFYLYYFLMQYPG 588
Query: 1079 RTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAA 1138
R+LVF NSIS +KRL+ LL +L PL LHA M+Q+QRL+NL++F + +LLATDVAA
Sbjct: 589 RSLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQKQRLRNLEQFARLEDCVLLATDVAA 648
Query: 1139 RGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEK 1198
RGLDIP ++HVIHY VPRTSEIY+HRSGRTARA NEGL+L+LI +++ + K++ +L+K
Sbjct: 649 RGLDIPKVQHVIHYQVPRTSEIYVHRSGRTARATNEGLSLMLIGPEDVINFKKIYKTLKK 708
Query: 1199 KVDLPDFPIDESVLSLIKKRIDLAKSIEYLESK 1231
D+P FP+ + ++K+RI LA+ IE E +
Sbjct: 709 DEDIPLFPVQTKYMDVVKERIRLARQIEKSEYR 741
Score = 316 bits (809), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 190/492 (38%), Positives = 266/492 (54%), Gaps = 110/492 (22%)
Query: 175 TKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTE----------- 223
T I+S +PS D A +G T++ +L G + E P+
Sbjct: 302 TVIESEALPS------DTAAEARAKTGGTVS-DQALLFGDDDAGEGPSSLIREKPVPKQN 354
Query: 224 EDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQNHILDAG 283
E+E ++ +E+ + +EL+++SA + K+ L L+L PTRELA+QV+ HI
Sbjct: 355 ENEEENLDKEQTGNLKQELDDKSATCKTYPKRP---LLGLVLTPTRELAVQVKQHIDAVA 411
Query: 284 KYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVID 343
++T +K A +VGGMST+KQ R+LN+ P I+VATPGRLWE I+ H+HL L ++ LV+D
Sbjct: 412 RFTGIKTAILVGGMSTQKQQRMLNRRPEIVVATPGRLWELIKEKHYHLRNLRQLRCLVVD 471
Query: 344 ETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNILDRVTMTETSQPRQT 403
E DRM+E G HF EL +L+ + ++ + RQT
Sbjct: 472 EADRMVEKG----------------------------HFAELSQLLEMLNDSQYNPKRQT 503
Query: 404 FVFSAT--LTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGIT 461
VFSAT L H + KK K K + K+ L +KIG+
Sbjct: 504 LVFSATLTLVHQAPARILHKKHTKKMDKTA------------------KLDLLMQKIGMR 545
Query: 462 KTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDLLNIKSPKIVDLTEKIGITKTLT 521
PK++DLT +TLT
Sbjct: 546 G-----------------------------------------KPKVIDLTRNEATVETLT 564
Query: 522 ESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQR 581
E+KI C+ DEKD YLYYF++Q+PGR+LVF NSIS +KRL+ LL +L PL LHA M+Q+
Sbjct: 565 ETKIHCETDEKDFYLYYFLMQYPGRSLVFANSISCIKRLSGLLKVLDIMPLTLHACMHQK 624
Query: 582 QRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNE 641
QRL+NL++F + +LLATDVAARGLDIP ++HVIHY VPRTSEIY+HRSGRTARA NE
Sbjct: 625 QRLRNLEQFARLEDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYVHRSGRTARATNE 684
Query: 642 GLTVVLIESDEI 653
GL+++LI +++
Sbjct: 685 GLSLMLIGPEDV 696
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 67/96 (69%), Gaps = 1/96 (1%)
Query: 1240 WLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRID 1299
++HRSGRTARA NEGL+L+LI +++ + K++ +L+K D+P FP+ + ++K+RI
Sbjct: 671 YVHRSGRTARATNEGLSLMLIGPEDVINFKKIYKTLKKDEDIPLFPVQTKYMDVVKERIR 730
Query: 1300 LAKSIEYLESK-IKKNRPDNWLEKAAKDMDIIIDDE 1334
LA+ IE E + + ++W+E+AA ++I ++++
Sbjct: 731 LARQIEKSEYRNFQACLHNSWIEQAAAALEIELEED 766
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 45/59 (76%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGAL 1414
L+L PTRELA+QV+ HI ++T +K A +VGGMST+KQ R+LN+ P I+VATPG L
Sbjct: 390 GLVLTPTRELAVQVKQHIDAVARFTGIKTAILVGGMSTQKQQRMLNRRPEIVVATPGRL 448
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 145 DMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTL 204
D ++ W +P ++RAL GF PT IQ + + A+ + DI+GAAETGSGKTL
Sbjct: 186 DQKADVSAWKDLFVPRPVLRALSFLGFSAPTPIQVLTLAPAIRDKLDILGAAETGSGKTL 245
Query: 205 AFGIPILTGIVN 216
AF IP++ ++
Sbjct: 246 AFAIPMIHAVLQ 257
Score = 68.2 bits (165), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 762 DMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTL 821
D ++ W +P ++RAL GF PT IQ + + A+ + DI+GAAETGSGKTL
Sbjct: 186 DQKADVSAWKDLFVPRPVLRALSFLGFSAPTPIQVLTLAPAIRDKLDILGAAETGSGKTL 245
Query: 822 AFGIPILTGIVN 833
AF IP++ ++
Sbjct: 246 AFAIPMIHAVLQ 257
>sp|Q9ESV0|DDX24_MOUSE ATP-dependent RNA helicase DDX24 OS=Mus musculus GN=Ddx24 PE=1 SV=2
Length = 857
Score = 374 bits (960), Expect = e-102, Method: Compositional matrix adjust.
Identities = 193/392 (49%), Positives = 266/392 (67%), Gaps = 6/392 (1%)
Query: 843 ENDSGLEEEAEEVLEELEEESANTTEFVK-KTRNKLYALILAPTRELAIQVQNHILDAGK 901
+N+ G E+ E +L++E + K R L L+L PTRELAIQV+ HI K
Sbjct: 353 QNEDGEEKFDAEQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAK 412
Query: 902 YTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDE 961
+T + A +VGGMST+KQ R+LN+ P I++ATPGRLWE ++ H HL+ L ++ LVIDE
Sbjct: 413 FTGINTAILVGGMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDE 472
Query: 962 TDRMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLT--HSLKNSLNLKKGQSKSKKV 1019
DRM+E GHF EL +L+ + ++ + RQT VFSATLT H + KK KK+
Sbjct: 473 ADRMVEKGHFAELSQLLEMLNDSQYNPSRQTLVFSATLTLVHQAPARILHKK---HVKKM 529
Query: 1020 SKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGR 1079
K D +Q + PK++DLT G +TLTE+KI C+ DEKD YLYYF++Q+PGR
Sbjct: 530 DKTDKLDLLMQKVGMRGKPKVIDLTRNEGTVETLTETKIHCETDEKDLYLYYFLMQYPGR 589
Query: 1080 TLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAAR 1139
+LVF NSIS +KRL+ LL +L PL LHA M+Q+QRL+NL++F + +LLATDVAAR
Sbjct: 590 SLVFANSISCIKRLSGLLKVLDVMPLTLHACMHQKQRLRNLEQFARLQDCVLLATDVAAR 649
Query: 1140 GLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKK 1199
GLDIP ++HVIHY VPRTSEIYIHRSGRTARA +EGL+L+LI +++ + K++ +L+K
Sbjct: 650 GLDIPKVQHVIHYQVPRTSEIYIHRSGRTARAASEGLSLMLIGPEDVINFKKIYKTLQKD 709
Query: 1200 VDLPDFPIDESVLSLIKKRIDLAKSIEYLESK 1231
D+P FP+ + ++K+RI LA+ IE E +
Sbjct: 710 EDIPLFPVQSKYMDVVKERIRLARQIEKAEYR 741
Score = 310 bits (793), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 179/431 (41%), Positives = 242/431 (56%), Gaps = 90/431 (20%)
Query: 226 ENDSGLEEEAEEVLEELEEESANTTEFVK-KTRNKLYALILAPTRELAIQVQNHILDAGK 284
+N+ G E+ E +L++E + K R L L+L PTRELAIQV+ HI K
Sbjct: 353 QNEDGEEKFDAEQAGKLKQELCDQIAIYKVHPRRPLLGLVLTPTRELAIQVRQHIDAVAK 412
Query: 285 YTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDE 344
+T + A +VGGMST+KQ R+LN+ P I++ATPGRLWE ++ H HL+ L ++ LVIDE
Sbjct: 413 FTGINTAILVGGMSTQKQQRMLNRHPEIVIATPGRLWELVKEKHPHLSNLRQLRCLVIDE 472
Query: 345 TDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNILDRVTMTETSQPRQTF 404
DRM+E G HF EL +L+ + ++ + RQT
Sbjct: 473 ADRMVEKG----------------------------HFAELSQLLEMLNDSQYNPSRQTL 504
Query: 405 VFSAT--LTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITK 462
VFSAT L H + KK KK+ K D K+ L +K+G+
Sbjct: 505 VFSATLTLVHQAPARILHKK---HVKKMDKTD---------------KLDLLMQKVGMRG 546
Query: 463 TLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDLLNIKSPKIVDLTEKIGITKTLTE 522
PK++DLT G +TLTE
Sbjct: 547 -----------------------------------------KPKVIDLTRNEGTVETLTE 565
Query: 523 SKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQ 582
+KI C+ DEKD YLYYF++Q+PGR+LVF NSIS +KRL+ LL +L PL LHA M+Q+Q
Sbjct: 566 TKIHCETDEKDLYLYYFLMQYPGRSLVFANSISCIKRLSGLLKVLDVMPLTLHACMHQKQ 625
Query: 583 RLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEG 642
RL+NL++F + +LLATDVAARGLDIP ++HVIHY VPRTSEIYIHRSGRTARA +EG
Sbjct: 626 RLRNLEQFARLQDCVLLATDVAARGLDIPKVQHVIHYQVPRTSEIYIHRSGRTARAASEG 685
Query: 643 LTVVLIESDEI 653
L+++LI +++
Sbjct: 686 LSLMLIGPEDV 696
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGAL 1414
L+L PTRELAIQV+ HI K+T + A +VGGMST+KQ R+LN+ P I++ATPG L
Sbjct: 390 GLVLTPTRELAIQVRQHIDAVAKFTGINTAILVGGMSTQKQQRMLNRHPEIVIATPGRL 448
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 145 DMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTL 204
D ++ W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTL
Sbjct: 187 DQKADVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTL 246
Query: 205 AFGIPILTGIV--NKLENP 221
AF IP++ ++ +K++ P
Sbjct: 247 AFAIPMIHSVLQWHKMKAP 265
Score = 70.1 bits (170), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 762 DMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTL 821
D ++ W +P+ ++RAL GF PT IQ++ + A+ + DI+GAAETGSGKTL
Sbjct: 187 DQKADVSAWRDLFVPKAVLRALSFLGFSAPTPIQALTLAPAIRDKLDILGAAETGSGKTL 246
Query: 822 AFGIPILTGIV--NKLENP 838
AF IP++ ++ +K++ P
Sbjct: 247 AFAIPMIHSVLQWHKMKAP 265
Score = 69.7 bits (169), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 1240 WLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRID 1299
++HRSGRTARA +EGL+L+LI +++ + K++ +L+K D+P FP+ + ++K+RI
Sbjct: 671 YIHRSGRTARAASEGLSLMLIGPEDVINFKKIYKTLQKDEDIPLFPVQSKYMDVVKERIR 730
Query: 1300 LAKSIEYLESK-IKKNRPDNWLEK 1322
LA+ IE E + + ++W+E+
Sbjct: 731 LARQIEKAEYRNFQACLHNSWIEQ 754
>sp|Q54TD7|DDX24_DICDI ATP-dependent RNA helicase ddx24 OS=Dictyostelium discoideum GN=ddx24
PE=3 SV=1
Length = 940
Score = 359 bits (922), Expect = 9e-98, Method: Compositional matrix adjust.
Identities = 217/562 (38%), Positives = 316/562 (56%), Gaps = 72/562 (12%)
Query: 750 KELLEVDT-SNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKD 808
KE+ E T S E + M+EW +N+ I++ L GF PT+IQS V+P A+ + D
Sbjct: 275 KEISEQKTISKEEQDQLDMSEWNSYNLDPLILKGLRSLGFSKPTEIQSSVIPVAVSSGYD 334
Query: 809 IVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTE 868
++GAA+TGSGKTLAFGIP++ I+ L + EN + ++ + E EE E
Sbjct: 335 VIGAAQTGSGKTLAFGIPMVQRILQHLRKHGQNVENKANKQQNDNDDENEDVEEEEEEEE 394
Query: 869 FVKKTR--NKLYALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKC 926
+++ KL++L++ PTRELAIQV NHI +T +KV +VGGM++++Q R+L+K
Sbjct: 395 EEGRSKEYRKLFSLVICPTRELAIQVTNHIKSIISHTNLKVISIVGGMASQRQQRVLSKR 454
Query: 927 PHILVATPGRLWEF-------------------------IQLGHF------------HLT 949
P I+VATPGRLWE ++ GHF H T
Sbjct: 455 PEIVVATPGRLWELITEGHQHLVELESLLCLGIDEADRMVEQGHFAELESILKTLPIHRT 514
Query: 950 ELYKINYLVIDET----------DRMIESGHF--PELKNILDRV-------------TMT 984
+ K L ET D++ + G + ++ D++
Sbjct: 515 AMSKKERLKKKETEEKRNKRRKVDKLNDKGEMIKGDQDDMDDQIPDEEMEELEQEEQNHL 574
Query: 985 ETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLT 1044
T+ RQTFVFSATL N S+ KK K P ++ + + K++D+T
Sbjct: 575 TTTHKRQTFVFSATLV----NIPGDGAPTSQKKKYRKLTPIENLIEKVRFQRDYKLIDVT 630
Query: 1045 EKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKCSP 1104
+K K L E+KI C +EKD YLYYF+ ++PGRTLVF NSI +RL + +L+
Sbjct: 631 QKRLTAKNLLETKIFCNLEEKDMYLYYFVERYPGRTLVFVNSIDCARRLIPIFNILEVPV 690
Query: 1105 LPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHR 1164
LHA M Q+QRLKNLDRFR +N +L+ATDVAARGLDIP ++HVIHY VPRT+++YIHR
Sbjct: 691 FALHAQMQQKQRLKNLDRFRTLDNVVLIATDVAARGLDIPLVQHVIHYQVPRTTQLYIHR 750
Query: 1165 SGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRIDLAKS 1224
SGRTAR++ +G+++VL+ E PLYIK+ +S+E D+ +FP D + ++ RI+LAK
Sbjct: 751 SGRTARSDQDGISVVLVTPKERPLYIKLDSSIEH--DIGNFPTDIRYMEGVRDRIELAKE 808
Query: 1225 IEYLESK-IKKNRPDNWLHRSG 1245
I+ L + +K NR +W +
Sbjct: 809 IDKLSHQSLKDNREKSWFKKQA 830
Score = 346 bits (887), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 215/552 (38%), Positives = 304/552 (55%), Gaps = 71/552 (12%)
Query: 133 KELLEVDT-SNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKD 191
KE+ E T S E + M+EW +N+ I++ L GF PT+IQS V+P A+ + D
Sbjct: 275 KEISEQKTISKEEQDQLDMSEWNSYNLDPLILKGLRSLGFSKPTEIQSSVIPVAVSSGYD 334
Query: 192 IVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTE 251
++GAA+TGSGKTLAFGIP++ I+ L + EN + ++ + E EE E
Sbjct: 335 VIGAAQTGSGKTLAFGIPMVQRILQHLRKHGQNVENKANKQQNDNDDENEDVEEEEEEEE 394
Query: 252 FVKKTR--NKLYALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKC 309
+++ KL++L++ PTRELAIQV NHI +T +KV +VGGM++++Q R+L+K
Sbjct: 395 EEGRSKEYRKLFSLVICPTRELAIQVTNHIKSIISHTNLKVISIVGGMASQRQQRVLSKR 454
Query: 310 PHILVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTET 369
P I+VATPGRLWE I GH HL EL + L IDE DRM+E G
Sbjct: 455 PEIVVATPGRLWELITEGHQHLVELESLLCLGIDEADRMVEQG----------------- 497
Query: 370 SQPRQTMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKK 429
HF EL++IL + + T+ S K L K+ + K K
Sbjct: 498 -----------HFAELESILKTLPIHRTAM-------------SKKERLKKKETEEKRNK 533
Query: 430 VSKGDP------SIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYF 483
K D IK QD ++ + P + LT + H +
Sbjct: 534 RRKVDKLNDKGEMIKGDQDDMDDQIPDEEMEELEQEEQNHLTTT-----HKRQTFVFSAT 588
Query: 484 ILQHPG-----------RTLCEEIQDLLN----IKSPKIVDLTEKIGITKTLTESKILCK 528
++ PG R L I++L+ + K++D+T+K K L E+KI C
Sbjct: 589 LVNIPGDGAPTSQKKKYRKLTP-IENLIEKVRFQRDYKLIDVTQKRLTAKNLLETKIFCN 647
Query: 529 HDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLD 588
+EKD YLYYF+ ++PGRTLVF NSI +RL + +L+ LHA M Q+QRLKNLD
Sbjct: 648 LEEKDMYLYYFVERYPGRTLVFVNSIDCARRLIPIFNILEVPVFALHAQMQQKQRLKNLD 707
Query: 589 RFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLI 648
RFR +N +L+ATDVAARGLDIP ++HVIHY VPRT+++YIHRSGRTAR++ +G++VVL+
Sbjct: 708 RFRTLDNVVLIATDVAARGLDIPLVQHVIHYQVPRTTQLYIHRSGRTARSDQDGISVVLV 767
Query: 649 ESDEIPLKTKFN 660
E PL K +
Sbjct: 768 TPKERPLYIKLD 779
Score = 82.0 bits (201), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 67/96 (69%), Gaps = 3/96 (3%)
Query: 1240 WLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRID 1299
++HRSGRTAR++ +G+++VL+ E PLYIK+ +S+E D+ +FP D + ++ RI+
Sbjct: 747 YIHRSGRTARSDQDGISVVLVTPKERPLYIKLDSSIEH--DIGNFPTDIRYMEGVRDRIE 804
Query: 1300 LAKSIEYLESK-IKKNRPDNWLEKAAKDMDIIIDDE 1334
LAK I+ L + +K NR +W +K A++MDI +D +
Sbjct: 805 LAKEIDKLSHQSLKDNREKSWFKKQAEEMDIELDGD 840
Score = 72.4 bits (176), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 45/59 (76%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGAL 1414
+L++ PTRELAIQV NHI +T +KV +VGGM++++Q R+L+K P I+VATPG L
Sbjct: 407 SLVICPTRELAIQVTNHIKSIISHTNLKVISIVGGMASQRQQRVLSKRPEIVVATPGRL 465
>sp|A3AVH5|RH13_ORYSJ DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp.
japonica GN=Os04g0510400 PE=2 SV=2
Length = 832
Score = 357 bits (916), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 209/536 (38%), Positives = 310/536 (57%), Gaps = 53/536 (9%)
Query: 754 EVDTSNNEDMFV---QMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIV 810
+++ NN+ + + ++ W + + +I A+ + GFK PT IQ P+A KD++
Sbjct: 181 DMEQDNNDGLILGEDEVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVI 240
Query: 811 GAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFV 870
GAAETGSGKTLAFG+PIL ++ EE E L E E +E ES
Sbjct: 241 GAAETGSGKTLAFGLPILQRLL-------EEQEKAMRLSREDESTQDENSRESP------ 287
Query: 871 KKTRNKLYALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHIL 930
L ALIL PTRELA QV +H+ +A K+ ++V +VGG+S EKQ R+L + P I+
Sbjct: 288 ------LRALILTPTRELAKQVCDHLKEAAKFLRIQVVPIVGGLSMEKQERLLKRKPEIV 341
Query: 931 VATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETS--- 987
V TPGRLWE + G+ HL +L+ +++ V+DE DRMIE GHF EL++I++ + +T S
Sbjct: 342 VGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADRMIERGHFHELQSIIEMLPVTNGSDEQ 401
Query: 988 ----------------QPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGD-PSIKRLQ 1030
+ RQTFVFSATL S LK+G +K + D SI+ L
Sbjct: 402 TVGTTPSCETVPILQIKKRQTFVFSATLALSANFRKKLKRGLVTAKASASTDLSSIEALS 461
Query: 1031 DLLNIK-SPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHP-GRTLVFCNSIS 1088
+K + +IVDLT+ + + L ES I C D+KD+YLYY + H GRT++FC SI+
Sbjct: 462 KQARMKPNAEIVDLTKASILPEKLEESFIECSDDDKDAYLYYILSVHGQGRTIIFCTSIA 521
Query: 1089 SVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEH 1148
+++ L+ +L +L + L HA M QR R+K +DRFR+ NSIL+ATD ARG+D +
Sbjct: 522 ALRHLSSILRVLGINVLTNHAQMQQRARMKAVDRFRESENSILVATDGFARGMDFDDVRT 581
Query: 1149 VIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPID 1208
VIHY +P ++++YIHRSGRTAR + G ++ LI + + + SL K+ +L FP+D
Sbjct: 582 VIHYQLPHSTDVYIHRSGRTARKSMAGCSIALISPADKAKFYSLCKSLSKE-NLQQFPVD 640
Query: 1209 ESVLSLIKKRIDLAKSIEYLESK-IKKNRPDNWLHRSGRTARANNEGLTLVLIESD 1263
+ + + R+ LA+ I+ + K ++N +WL R N E + L+L SD
Sbjct: 641 HAYMPAVMNRLTLARQIDKITRKNSQENANKSWLQR-------NAESMGLLLETSD 689
Score = 311 bits (796), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 193/516 (37%), Positives = 283/516 (54%), Gaps = 86/516 (16%)
Query: 137 EVDTSNNEDMFV---QMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIV 193
+++ NN+ + + ++ W + + +I A+ + GFK PT IQ P+A KD++
Sbjct: 181 DMEQDNNDGLILGEDEVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVI 240
Query: 194 GAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFV 253
GAAETGSGKTLAFG+PIL ++ EE E L E E +E ES
Sbjct: 241 GAAETGSGKTLAFGLPILQRLL-------EEQEKAMRLSREDESTQDENSRESP------ 287
Query: 254 KKTRNKLYALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHIL 313
L ALIL PTRELA QV +H+ +A K+ ++V +VGG+S EKQ R+L + P I+
Sbjct: 288 ------LRALILTPTRELAKQVCDHLKEAAKFLRIQVVPIVGGLSMEKQERLLKRKPEIV 341
Query: 314 VATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPR 373
V TPGRLWE + G+ HL +L+ +++ V+DE DRMIE GHF EL++I++ + +T S
Sbjct: 342 VGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADRMIERGHFHELQSIIEMLPVTNGSD-E 400
Query: 374 QTMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKG 433
QT+ G P + V + + + RQTFVFSATL S N +K K+ +G
Sbjct: 401 QTV---GTTPSCET----VPILQIKK-RQTFVFSATLALSA----NFRK------KLKRG 442
Query: 434 DPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLC 493
L+ K+ DL+ ++K P
Sbjct: 443 ---------LVTAKASASTDLSSIEALSKQAR--------------------MKP----- 468
Query: 494 EEIQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHP-GRTLVFCN 552
+ +IVDLT+ + + L ES I C D+KD+YLYY + H GRT++FC
Sbjct: 469 ----------NAEIVDLTKASILPEKLEESFIECSDDDKDAYLYYILSVHGQGRTIIFCT 518
Query: 553 SISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPG 612
SI++++ L+ +L +L + L HA M QR R+K +DRFR+ NSIL+ATD ARG+D
Sbjct: 519 SIAALRHLSSILRVLGINVLTNHAQMQQRARMKAVDRFRESENSILVATDGFARGMDFDD 578
Query: 613 IEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLI 648
+ VIHY +P ++++YIHRSGRTAR + G ++ LI
Sbjct: 579 VRTVIHYQLPHSTDVYIHRSGRTARKSMAGCSIALI 614
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGAL 1414
ALIL PTRELA QV +H+ +A K+ ++V +VGG+S EKQ R+L + P I+V TPG L
Sbjct: 290 ALILTPTRELAKQVCDHLKEAAKFLRIQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRL 348
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKR 1297
D ++HRSGRTAR + G ++ LI + + + SL K+ +L FP+D + + + R
Sbjct: 592 DVYIHRSGRTARKSMAGCSIALISPADKAKFYSLCKSLSKE-NLQQFPVDHAYMPAVMNR 650
Query: 1298 IDLAKSIEYLESK-IKKNRPDNWLEKAAKDMDIIID 1332
+ LA+ I+ + K ++N +WL++ A+ M ++++
Sbjct: 651 LTLARQIDKITRKNSQENANKSWLQRNAESMGLLLE 686
>sp|A2XVF7|RH13_ORYSI DEAD-box ATP-dependent RNA helicase 13 OS=Oryza sativa subsp. indica
GN=OsI_016050 PE=2 SV=2
Length = 832
Score = 357 bits (916), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 209/536 (38%), Positives = 310/536 (57%), Gaps = 53/536 (9%)
Query: 754 EVDTSNNEDMFV---QMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIV 810
+++ NN+ + + ++ W + + +I A+ + GFK PT IQ P+A KD++
Sbjct: 181 DMEQDNNDGLILGEDEVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVI 240
Query: 811 GAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFV 870
GAAETGSGKTLAFG+PIL ++ EE E L E E +E ES
Sbjct: 241 GAAETGSGKTLAFGLPILQRLL-------EEQEKAMRLSREDESTQDENSRESP------ 287
Query: 871 KKTRNKLYALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHIL 930
L ALIL PTRELA QV +H+ +A K+ ++V +VGG+S EKQ R+L + P I+
Sbjct: 288 ------LRALILTPTRELAKQVCDHLKEAAKFLRIQVVPIVGGLSMEKQERLLKRKPEIV 341
Query: 931 VATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETS--- 987
V TPGRLWE + G+ HL +L+ +++ V+DE DRMIE GHF EL++I++ + +T S
Sbjct: 342 VGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADRMIERGHFHELQSIIEMLPVTNGSDEQ 401
Query: 988 ----------------QPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGD-PSIKRLQ 1030
+ RQTFVFSATL S LK+G +K + D SI+ L
Sbjct: 402 TVGTTPSCETVPILQIKKRQTFVFSATLALSANFRKKLKRGLVTAKASASTDLSSIEALS 461
Query: 1031 DLLNIK-SPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHP-GRTLVFCNSIS 1088
+K + +IVDLT+ + + L ES I C D+KD+YLYY + H GRT++FC SI+
Sbjct: 462 KQARMKPNAEIVDLTKASILPEKLEESFIECSDDDKDAYLYYILSVHGQGRTIIFCTSIA 521
Query: 1089 SVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEH 1148
+++ L+ +L +L + L HA M QR R+K +DRFR+ NSIL+ATD ARG+D +
Sbjct: 522 ALRHLSSILRVLGINVLTNHAQMQQRARMKAVDRFRESENSILVATDGFARGMDFDDVRT 581
Query: 1149 VIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPID 1208
VIHY +P ++++YIHRSGRTAR + G ++ LI + + + SL K+ +L FP+D
Sbjct: 582 VIHYQLPHSTDVYIHRSGRTARKSMAGCSIALISPADKAKFYSLCKSLSKE-NLQQFPVD 640
Query: 1209 ESVLSLIKKRIDLAKSIEYLESK-IKKNRPDNWLHRSGRTARANNEGLTLVLIESD 1263
+ + + R+ LA+ I+ + K ++N +WL R N E + L+L SD
Sbjct: 641 HAYMPAVMNRLTLARQIDKITRKNSQENANKSWLQR-------NAESMGLLLETSD 689
Score = 311 bits (796), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 193/516 (37%), Positives = 283/516 (54%), Gaps = 86/516 (16%)
Query: 137 EVDTSNNEDMFV---QMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIV 193
+++ NN+ + + ++ W + + +I A+ + GFK PT IQ P+A KD++
Sbjct: 181 DMEQDNNDGLILGEDEVYAWRELRLHPLLITAVRRLGFKEPTPIQKACFPAAAHQGKDVI 240
Query: 194 GAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFV 253
GAAETGSGKTLAFG+PIL ++ EE E L E E +E ES
Sbjct: 241 GAAETGSGKTLAFGLPILQRLL-------EEQEKAMRLSREDESTQDENSRESP------ 287
Query: 254 KKTRNKLYALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHIL 313
L ALIL PTRELA QV +H+ +A K+ ++V +VGG+S EKQ R+L + P I+
Sbjct: 288 ------LRALILTPTRELAKQVCDHLKEAAKFLRIQVVPIVGGLSMEKQERLLKRKPEIV 341
Query: 314 VATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPR 373
V TPGRLWE + G+ HL +L+ +++ V+DE DRMIE GHF EL++I++ + +T S
Sbjct: 342 VGTPGRLWELMSTGNQHLIKLHSLSFFVLDEADRMIERGHFHELQSIIEMLPVTNGSD-E 400
Query: 374 QTMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKG 433
QT+ G P + V + + + RQTFVFSATL S N +K K+ +G
Sbjct: 401 QTV---GTTPSCET----VPILQIKK-RQTFVFSATLALSA----NFRK------KLKRG 442
Query: 434 DPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLC 493
L+ K+ DL+ ++K P
Sbjct: 443 ---------LVTAKASASTDLSSIEALSKQAR--------------------MKP----- 468
Query: 494 EEIQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHP-GRTLVFCN 552
+ +IVDLT+ + + L ES I C D+KD+YLYY + H GRT++FC
Sbjct: 469 ----------NAEIVDLTKASILPEKLEESFIECSDDDKDAYLYYILSVHGQGRTIIFCT 518
Query: 553 SISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPG 612
SI++++ L+ +L +L + L HA M QR R+K +DRFR+ NSIL+ATD ARG+D
Sbjct: 519 SIAALRHLSSILRVLGINVLTNHAQMQQRARMKAVDRFRESENSILVATDGFARGMDFDD 578
Query: 613 IEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLI 648
+ VIHY +P ++++YIHRSGRTAR + G ++ LI
Sbjct: 579 VRTVIHYQLPHSTDVYIHRSGRTARKSMAGCSIALI 614
Score = 68.6 bits (166), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGAL 1414
ALIL PTRELA QV +H+ +A K+ ++V +VGG+S EKQ R+L + P I+V TPG L
Sbjct: 290 ALILTPTRELAKQVCDHLKEAAKFLRIQVVPIVGGLSMEKQERLLKRKPEIVVGTPGRL 348
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 57/96 (59%), Gaps = 2/96 (2%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKR 1297
D ++HRSGRTAR + G ++ LI + + + SL K+ +L FP+D + + + R
Sbjct: 592 DVYIHRSGRTARKSMAGCSIALISPADKAKFYSLCKSLSKE-NLQQFPVDHAYMPAVMNR 650
Query: 1298 IDLAKSIEYLESK-IKKNRPDNWLEKAAKDMDIIID 1332
+ LA+ I+ + K ++N +WL++ A+ M ++++
Sbjct: 651 LTLARQIDKITRKNSQENANKSWLQRNAESMGLLLE 686
>sp|Q93Y39|RH13_ARATH DEAD-box ATP-dependent RNA helicase 13 OS=Arabidopsis thaliana
GN=RH13 PE=2 SV=3
Length = 826
Score = 339 bits (869), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 198/500 (39%), Positives = 287/500 (57%), Gaps = 43/500 (8%)
Query: 767 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 826
+ W + +++++Y+ FK PTKIQ A KD++GAAETGSGKTLAFG+P
Sbjct: 189 FSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLP 248
Query: 827 ILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTR 886
IL +++ E E L L+ E A L ALI+ PTR
Sbjct: 249 ILQRLLD---------------EREKVGKLYALKGEEAQKY----AADGYLRALIITPTR 289
Query: 887 ELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHF 946
ELA+QV H+ +A K VKV +VGGM +EKQ R L + P I+VATPGRLWE + G
Sbjct: 290 ELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGRLWELMSAGEK 349
Query: 947 HLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTET-------------------S 987
HL EL+ +++ V+DE DRM+E GHF EL++ILD + +T+
Sbjct: 350 HLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTDKPNEGKTQTVKSNDTVLNVPK 409
Query: 988 QPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDP-SIKRLQDLLNIK-SPKIVDLTE 1045
+ RQTFVFSAT+ S LK+G SKSK+ S G+ SI+ L + ++ + I+DLT
Sbjct: 410 KKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMRDNVAIIDLTT 469
Query: 1046 KIGITKTLTESKILCKHDEKDSYLYYFILQHP-GRTLVFCNSISSVKRLTQLLTMLKCSP 1104
+ + ES I C+ EKD+YLYY + H GRT+VFC S++ ++ ++ LL +L
Sbjct: 470 TSILAPKIEESFIKCEEKEKDAYLYYILSVHGQGRTIVFCTSVTDLRHISGLLKILGLDV 529
Query: 1105 LPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHR 1164
L + M QR RLK++DRFR N IL+ATD+ ARG+DI + +IHY +P ++E+Y+HR
Sbjct: 530 CTLFSEMKQRARLKSIDRFRASENGILIATDLVARGIDIKNVRTIIHYKLPHSAEVYVHR 589
Query: 1165 SGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRIDLAKS 1224
GRTARA +G ++ LIE +E + + S + + FP+D S + ++KR+ LA+
Sbjct: 590 CGRTARAFADGCSIALIEPNETSKFYTLCKSFSME-SVKIFPLDNSYMPAVRKRLYLARQ 648
Query: 1225 IEYLESKIKKNRPD-NWLHR 1243
I +E K + D WL +
Sbjct: 649 IYEIERKGSRENADRTWLKK 668
Score = 281 bits (720), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 188/508 (37%), Positives = 266/508 (52%), Gaps = 91/508 (17%)
Query: 150 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 209
+ W + +++++Y+ FK PTKIQ A KD++GAAETGSGKTLAFG+P
Sbjct: 189 FSAWSSMRLHPLLMKSIYRLDFKEPTKIQKACFNVAAYQGKDVIGAAETGSGKTLAFGLP 248
Query: 210 ILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTR 269
IL +++ E E L L+ E A L ALI+ PTR
Sbjct: 249 ILQRLLD---------------EREKVGKLYALKGEEAQKY----AADGYLRALIITPTR 289
Query: 270 ELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHF 329
ELA+QV H+ +A K VKV +VGGM +EKQ R L + P I+VATPGRLWE + G
Sbjct: 290 ELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGRLWELMSAGEK 349
Query: 330 HLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNIL 389
HL EL+ +++ V+DE DRM+E GHF EL++ILD + +T+ +P + G +K+
Sbjct: 350 HLVELHSLSFFVLDEADRMVERGHFRELQSILDLLPVTD--KPNE-----GKTQTVKS-- 400
Query: 390 DRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDP-SIKRLQDLLNIK- 447
+ + + RQTFVFSAT+ S LK+G SKSK+ S G+ SI+ L + ++
Sbjct: 401 NDTVLNVPKKKRQTFVFSATIALSSDFRKKLKRGSSKSKQSSSGEVNSIEVLSERAGMRD 460
Query: 448 SPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHP-GRTL--CEEIQDLLNIKS 504
+ I+DLT + + ES I C+ EKD+YLYY + H GRT+ C + DL +I
Sbjct: 461 NVAIIDLTTTSILAPKIEESFIKCEEKEKDAYLYYILSVHGQGRTIVFCTSVTDLRHIS- 519
Query: 505 PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLL 564
G+ K L L C S +K
Sbjct: 520 ----------GLLKIL--------------------------GLDVCTLFSEMK------ 537
Query: 565 TMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRT 624
QR RLK++DRFR N IL+ATD+ ARG+DI + +IHY +P +
Sbjct: 538 ---------------QRARLKSIDRFRASENGILIATDLVARGIDIKNVRTIIHYKLPHS 582
Query: 625 SEIYIHRSGRTARANNEGLTVVLIESDE 652
+E+Y+HR GRTARA +G ++ LIE +E
Sbjct: 583 AEVYVHRCGRTARAFADGCSIALIEPNE 610
Score = 67.8 bits (164), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 42/59 (71%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGAL 1414
ALI+ PTRELA+QV H+ +A K VKV +VGGM +EKQ R L + P I+VATPG L
Sbjct: 282 ALIITPTRELALQVTEHLENAAKNLSVKVVPIVGGMFSEKQERRLKEKPEIVVATPGRL 340
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 1240 WLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRID 1299
++HR GRTARA +G ++ LIE +E + + S + + FP+D S + ++KR+
Sbjct: 586 YVHRCGRTARAFADGCSIALIEPNETSKFYTLCKSFSME-SVKIFPLDNSYMPAVRKRLY 644
Query: 1300 LAKSIEYLESKIKKNRPD-NWLEKAAKDM 1327
LA+ I +E K + D WL+K A+ M
Sbjct: 645 LARQIYEIERKGSRENADRTWLKKHAESM 673
>sp|P0CQ91|MAK5_CRYNB ATP-dependent RNA helicase MAK5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=MAK5 PE=3 SV=1
Length = 772
Score = 331 bits (848), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 209/528 (39%), Positives = 306/528 (57%), Gaps = 77/528 (14%)
Query: 753 LEVDTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGA 812
L+ + + N+D+ + EW ++ ++ R+ F PT IQS +P+ + R D+VG
Sbjct: 160 LDDEPAFNDDL---LPEWSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGITGR-DVVGV 215
Query: 813 AETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKK 872
AETGSGKTLA+ +PIL ++ + ++ +G+
Sbjct: 216 AETGSGKTLAYSLPILHYLLG-------QRKSKAGI------------------------ 244
Query: 873 TRNKLYALILAPTRELAIQVQNHI---LDAGKYTP----------VKVACVVGGMSTEKQ 919
+ L AL+L PTRELA+QV +H+ L TP V V VVGG+S +KQ
Sbjct: 245 -KRPLSALVLCPTRELALQVMDHLNALLKHALATPDGEKPQGPPRVSVGSVVGGLSAQKQ 303
Query: 920 LRILNKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNIL- 978
RIL + ++VATPGRLW+ I+ T + + +LVIDE DRMIE+GHF EL++I+
Sbjct: 304 KRILERGCDVIVATPGRLWDLIKADDELATSVRTLRFLVIDEADRMIENGHFAELESIVK 363
Query: 979 --------------DRV-----TMTETSQPR---QTFVFSATLTHSLKNSLNLKKGQSKS 1016
D V T+ E S R QTFVFSATL+ L+ NLK+
Sbjct: 364 LTQRSTAQQGPDDDDPVFQAMATLFEESTAREDMQTFVFSATLSKDLQK--NLKRRSRSW 421
Query: 1017 KKVSKGDPSIKRLQDLLNIK--SPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFIL 1074
K K +++ L + L+ + +P+++DL+ + G+ +L ES I D+KD YLYYF+L
Sbjct: 422 KGKGKRSSTLEDLVEKLDFRDENPEVIDLSPEGGVVSSLRESMIESTKDDKDLYLYYFLL 481
Query: 1075 QHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLAT 1134
++PGR++VF NSI S++RL LLT+L+ PLH+ + Q+QRLKNLDRF+ IL+AT
Sbjct: 482 RYPGRSIVFVNSIDSIRRLLPLLTLLQLPVFPLHSHLQQKQRLKNLDRFKSNPKGILIAT 541
Query: 1135 DVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMFN 1194
DVAARGLDIP ++HV+H+++PRT++ YIHRSGRTARA NEG L L+ DE + +
Sbjct: 542 DVAARGLDIPQVDHVVHFNLPRTADAYIHRSGRTARAQNEGFALQLVSPDEKSVQRALMK 601
Query: 1195 SLEKKVDLPDFPIDESVLSLIKKRIDLAKSIEYLESKIKKNRPD-NWL 1241
SLE+ +LPD PI+ L +++R+ +A IE + + K D NWL
Sbjct: 602 SLERTHELPDLPIEAGFLPSLRERLRVATEIEKAQHRATKATHDKNWL 649
Score = 290 bits (743), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 199/531 (37%), Positives = 291/531 (54%), Gaps = 112/531 (21%)
Query: 136 LEVDTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGA 195
L+ + + N+D+ + EW ++ ++ R+ F PT IQS +P+ + R D+VG
Sbjct: 160 LDDEPAFNDDL---LPEWSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGITGR-DVVGV 215
Query: 196 AETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKK 255
AETGSGKTLA+ +PIL ++ + ++ +G+
Sbjct: 216 AETGSGKTLAYSLPILHYLLG-------QRKSKAGI------------------------ 244
Query: 256 TRNKLYALILAPTRELAIQVQNHI---LDAGKYTP----------VKVACVVGGMSTEKQ 302
+ L AL+L PTRELA+QV +H+ L TP V V VVGG+S +KQ
Sbjct: 245 -KRPLSALVLCPTRELALQVMDHLNALLKHALATPDGEKPQGPPRVSVGSVVGGLSAQKQ 303
Query: 303 LRILNKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILD 362
RIL + ++VATPGRLW+ I+ T + + +LVIDE DRMIE+GHF EL++I
Sbjct: 304 KRILERGCDVIVATPGRLWDLIKADDELATSVRTLRFLVIDEADRMIENGHFAELESI-- 361
Query: 363 RVTMTETSQPRQTMIESGH-FPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLK 421
V +T+ S +Q + F + + + T E QTFVFSATL+ L+ NLK
Sbjct: 362 -VKLTQRSTAQQGPDDDDPVFQAMATLFEESTARED---MQTFVFSATLSKDLQK--NLK 415
Query: 422 KGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLY 481
+ +S+S K KG +S + DL EK+ D +D
Sbjct: 416 R-RSRSWK-GKGK------------RSSTLEDLVEKL---------------DFRD---- 442
Query: 482 YFILQHPGRTLCEEIQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFIL 541
++P+++DL+ + G+ +L ES I D+KD YLYYF+L
Sbjct: 443 ---------------------ENPEVIDLSPEGGVVSSLRESMIESTKDDKDLYLYYFLL 481
Query: 542 QHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLAT 601
++PGR++VF NSI S++RL LLT+L+ PLH+ + Q+QRLKNLDRF+ IL+AT
Sbjct: 482 RYPGRSIVFVNSIDSIRRLLPLLTLLQLPVFPLHSHLQQKQRLKNLDRFKSNPKGILIAT 541
Query: 602 DVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDE 652
DVAARGLDIP ++HV+H+++PRT++ YIHRSGRTARA NEG + L+ DE
Sbjct: 542 DVAARGLDIPQVDHVVHFNLPRTADAYIHRSGRTARAQNEGFALQLVSPDE 592
Score = 79.7 bits (195), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKR 1297
D ++HRSGRTARA NEG L L+ DE + + SLE+ +LPD PI+ L +++R
Sbjct: 566 DAYIHRSGRTARAQNEGFALQLVSPDEKSVQRALMKSLERTHELPDLPIEAGFLPSLRER 625
Query: 1298 IDLAKSIEYLESKIKKNRPD-NWLEKAAKDMDIIID 1332
+ +A IE + + K D NWL +AA+ MDI ID
Sbjct: 626 LRVATEIEKAQHRATKATHDKNWLLEAAEAMDIDID 661
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 17/94 (18%)
Query: 1356 ALILAPTRELAIQVQNHI---LDAGKYTP----------VKVACVVGGMSTEKQLRILNK 1402
AL+L PTRELA+QV +H+ L TP V V VVGG+S +KQ RIL +
Sbjct: 250 ALVLCPTRELALQVMDHLNALLKHALATPDGEKPQGPPRVSVGSVVGGLSAQKQKRILER 309
Query: 1403 CPHILVATPGALSLKRIDLAKSIEYLESKIKKNR 1436
++VATPG L DL K+ + L + ++ R
Sbjct: 310 GCDVIVATPGRL----WDLIKADDELATSVRTLR 339
>sp|P0CQ90|MAK5_CRYNJ ATP-dependent RNA helicase MAK5 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=MAK5 PE=3 SV=1
Length = 772
Score = 330 bits (847), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 208/528 (39%), Positives = 305/528 (57%), Gaps = 77/528 (14%)
Query: 753 LEVDTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGA 812
L+ + + N+D+ + EW ++ ++ R+ F PT IQS +P+ + R D+VG
Sbjct: 160 LDDEPAFNDDL---LPEWSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGITGR-DVVGV 215
Query: 813 AETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKK 872
AETGSGKTLA+ +PIL ++ + ++ +G+
Sbjct: 216 AETGSGKTLAYSLPILHYLLG-------QRKSKAGI------------------------ 244
Query: 873 TRNKLYALILAPTRELAIQVQNHI---LDAGKYTP----------VKVACVVGGMSTEKQ 919
+ L AL+L PTRELA+QV +H+ L TP V V VVGG+S +KQ
Sbjct: 245 -KRPLSALVLCPTRELALQVMDHLNALLKHALATPDGEKPQGPPRVSVGSVVGGLSAQKQ 303
Query: 920 LRILNKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNIL- 978
RIL + ++VATPGRLW+ I+ T + + +LVIDE DRMIE+GHF EL++I+
Sbjct: 304 KRILERGCDVIVATPGRLWDLIKADDELATSVRTLRFLVIDEADRMIENGHFAELESIVK 363
Query: 979 --------------DRV-----TMTETSQPR---QTFVFSATLTHSLKNSLNLKKGQSKS 1016
D V T+ E S R QTFVFSATL+ L+ NLK+
Sbjct: 364 LTQRSTAQQGPDDDDPVFQAMATLFEESTAREDMQTFVFSATLSKDLQK--NLKRRSRSW 421
Query: 1017 KKVSKGDPSIKRLQDLLNIK--SPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFIL 1074
K K +++ L + L+ + +P+++DL+ + G+ +L ES I D+KD YLYYF+L
Sbjct: 422 KGKGKRSSTLEDLVEKLDFRDENPEVIDLSPEGGVVSSLRESMIESTKDDKDLYLYYFLL 481
Query: 1075 QHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLAT 1134
++PGR++VF NSI S++RL L T+L+ PLH+ + Q+QRLKNLDRF+ IL+AT
Sbjct: 482 RYPGRSIVFVNSIDSIRRLLPLFTLLQLPVFPLHSHLQQKQRLKNLDRFKSNPKGILIAT 541
Query: 1135 DVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMFN 1194
DVAARGLDIP ++HV+H+++PRT++ YIHRSGRTARA NEG L L+ DE + +
Sbjct: 542 DVAARGLDIPQVDHVVHFNLPRTADAYIHRSGRTARAQNEGFALQLVSPDEKSVQRALMK 601
Query: 1195 SLEKKVDLPDFPIDESVLSLIKKRIDLAKSIEYLESKIKKNRPD-NWL 1241
SLE+ +LPD PI+ L +++R+ +A IE + + K D NWL
Sbjct: 602 SLERTHELPDLPIEAGFLPSLRERLRVATEIEKAQHRATKATHDKNWL 649
Score = 290 bits (742), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 198/531 (37%), Positives = 290/531 (54%), Gaps = 112/531 (21%)
Query: 136 LEVDTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGA 195
L+ + + N+D+ + EW ++ ++ R+ F PT IQS +P+ + R D+VG
Sbjct: 160 LDDEPAFNDDL---LPEWSSISLHPSLKRSFLASSFTAPTAIQSRAIPAGITGR-DVVGV 215
Query: 196 AETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKK 255
AETGSGKTLA+ +PIL ++ + ++ +G+
Sbjct: 216 AETGSGKTLAYSLPILHYLLG-------QRKSKAGI------------------------ 244
Query: 256 TRNKLYALILAPTRELAIQVQNHI---LDAGKYTP----------VKVACVVGGMSTEKQ 302
+ L AL+L PTRELA+QV +H+ L TP V V VVGG+S +KQ
Sbjct: 245 -KRPLSALVLCPTRELALQVMDHLNALLKHALATPDGEKPQGPPRVSVGSVVGGLSAQKQ 303
Query: 303 LRILNKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILD 362
RIL + ++VATPGRLW+ I+ T + + +LVIDE DRMIE+GHF EL++I
Sbjct: 304 KRILERGCDVIVATPGRLWDLIKADDELATSVRTLRFLVIDEADRMIENGHFAELESI-- 361
Query: 363 RVTMTETSQPRQTMIESGH-FPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLK 421
V +T+ S +Q + F + + + T E QTFVFSATL+ L+ NLK
Sbjct: 362 -VKLTQRSTAQQGPDDDDPVFQAMATLFEESTARED---MQTFVFSATLSKDLQK--NLK 415
Query: 422 KGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLY 481
+ +S+S K KG +S + DL EK+ D +D
Sbjct: 416 R-RSRSWK-GKGK------------RSSTLEDLVEKL---------------DFRD---- 442
Query: 482 YFILQHPGRTLCEEIQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFIL 541
++P+++DL+ + G+ +L ES I D+KD YLYYF+L
Sbjct: 443 ---------------------ENPEVIDLSPEGGVVSSLRESMIESTKDDKDLYLYYFLL 481
Query: 542 QHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLAT 601
++PGR++VF NSI S++RL L T+L+ PLH+ + Q+QRLKNLDRF+ IL+AT
Sbjct: 482 RYPGRSIVFVNSIDSIRRLLPLFTLLQLPVFPLHSHLQQKQRLKNLDRFKSNPKGILIAT 541
Query: 602 DVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDE 652
DVAARGLDIP ++HV+H+++PRT++ YIHRSGRTARA NEG + L+ DE
Sbjct: 542 DVAARGLDIPQVDHVVHFNLPRTADAYIHRSGRTARAQNEGFALQLVSPDE 592
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKR 1297
D ++HRSGRTARA NEG L L+ DE + + SLE+ +LPD PI+ L +++R
Sbjct: 566 DAYIHRSGRTARAQNEGFALQLVSPDEKSVQRALMKSLERTHELPDLPIEAGFLPSLRER 625
Query: 1298 IDLAKSIEYLESKIKKNRPD-NWLEKAAKDMDIIID 1332
+ +A IE + + K D NWL +AA+ MDI ID
Sbjct: 626 LRVATEIEKAQHRATKATHDKNWLLEAAEAMDIDID 661
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 52/94 (55%), Gaps = 17/94 (18%)
Query: 1356 ALILAPTRELAIQVQNHI---LDAGKYTP----------VKVACVVGGMSTEKQLRILNK 1402
AL+L PTRELA+QV +H+ L TP V V VVGG+S +KQ RIL +
Sbjct: 250 ALVLCPTRELALQVMDHLNALLKHALATPDGEKPQGPPRVSVGSVVGGLSAQKQKRILER 309
Query: 1403 CPHILVATPGALSLKRIDLAKSIEYLESKIKKNR 1436
++VATPG L DL K+ + L + ++ R
Sbjct: 310 GCDVIVATPGRL----WDLIKADDELATSVRTLR 339
>sp|O74393|MAK5_SCHPO ATP-dependent RNA helicase mak5 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mak5 PE=1 SV=1
Length = 648
Score = 327 bits (838), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 196/532 (36%), Positives = 297/532 (55%), Gaps = 70/532 (13%)
Query: 733 KKLKQKKKKKQTYTSANKELLEVD---TSNNEDMF-------------VQMAEWVKFNIP 776
+K +KKKK TS E+ + TS N + F V ++ W F++
Sbjct: 71 QKEASEKKKKGKRTSPTIEMTSLGSKVTSKNYNEFSTLEEEDEHNSHGVDVSAWAHFSLS 130
Query: 777 ETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLE 836
++ +L + GF P IQS+V+P A + DI+G A+TGSGKTLAFGIPIL
Sbjct: 131 PEMLGSLSKAGFSKPMPIQSLVIPEASIGF-DIIGKADTGSGKTLAFGIPIL-------- 181
Query: 837 NPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQNHI 896
E L ++ ++V+ AL++APTRELA Q+ H
Sbjct: 182 ----------------EHCLRNVD------AKYVQ-------ALVVAPTRELAHQICQH- 211
Query: 897 LDAGKYTP-VKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQ----LGHFHLTEL 951
+ K +P ++V + GG++ +KQ R+LNK PH++VATPGRLW I G+F
Sbjct: 212 FELIKPSPNIRVMSITGGLAVQKQQRLLNKHPHVVVATPGRLWSVINENNLTGNFK---- 267
Query: 952 YKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKK 1011
KI LV+DE DR+++ HF EL +L+ + +Q RQTF+FSAT L+ LKK
Sbjct: 268 -KIKCLVLDEADRLLQKSHFEELSKLLEILGNPMHTQ-RQTFIFSATFDEGLQQ--RLKK 323
Query: 1012 GQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYY 1071
+ P L+++ PK +D + + + E I C EKD YLYY
Sbjct: 324 NMKGNITEKYNSPMENMLKEVRFFGKPKFLDANPQSAVASRVLEGLIECAPAEKDLYLYY 383
Query: 1072 FILQHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSIL 1131
I+++PG+T+VF N I +KR+T L LK PLHA ++Q++RL++L++F++ +L
Sbjct: 384 LIMRYPGKTMVFANGIEDIKRITPFLNELKVPSYPLHAQLDQKKRLQSLEKFKNNPKGVL 443
Query: 1132 LATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIK 1191
+ TDVAARG+DIP + HVIHYHVP T+++Y+HRSGRTARAN +G+++++ E+ +
Sbjct: 444 VCTDVAARGIDIPSVTHVIHYHVPHTADMYVHRSGRTARANEDGVSILMCGPKELSQLKR 503
Query: 1192 MFNSLEKKVD-LPDFPIDESVLSLIKKRIDLAKSIEYLESKIKK-NRPDNWL 1241
+ L+KK++ +FP+D S+L ++K R+ LA I L K + R + WL
Sbjct: 504 LCYRLKKKIETFINFPVDMSILDILKTRVVLAHKIVNLTRKDGRVGREEAWL 555
Score = 278 bits (710), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 185/559 (33%), Positives = 274/559 (49%), Gaps = 152/559 (27%)
Query: 116 KKLKQKKKKKQTYTSANKELLEVD---TSNNEDMF-------------VQMAEWVKFNIP 159
+K +KKKK TS E+ + TS N + F V ++ W F++
Sbjct: 71 QKEASEKKKKGKRTSPTIEMTSLGSKVTSKNYNEFSTLEEEDEHNSHGVDVSAWAHFSLS 130
Query: 160 ETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLE 219
++ +L + GF P IQS+V+P A + DI+G A+TGSGKTLAFGIPIL
Sbjct: 131 PEMLGSLSKAGFSKPMPIQSLVIPEASIGF-DIIGKADTGSGKTLAFGIPIL-------- 181
Query: 220 NPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQNHI 279
E L ++ ++V+ AL++APTRELA Q+ H
Sbjct: 182 ----------------EHCLRNVD------AKYVQ-------ALVVAPTRELAHQICQH- 211
Query: 280 LDAGKYTP-VKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQ----LGHFHLTEL 334
+ K +P ++V + GG++ +KQ R+LNK PH++VATPGRLW I G+F
Sbjct: 212 FELIKPSPNIRVMSITGGLAVQKQQRLLNKHPHVVVATPGRLWSVINENNLTGNFK---- 267
Query: 335 YKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNILDRVTM 394
KI LV+DE DR+++ HF EL +L+ IL
Sbjct: 268 -KIKCLVLDEADRLLQKSHFEELSKLLE-------------------------ILGNPMH 301
Query: 395 TETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDL 454
T+ RQTF+FSAT L Q + KK KG+ +
Sbjct: 302 TQ----RQTFIFSATFDEGL---------QQRLKKNMKGN-------------------I 329
Query: 455 TEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDLLNIKSPKIVDLTEKI 514
TEK P + +E++ PK +D +
Sbjct: 330 TEK---------------------------YNSPMENMLKEVR---FFGKPKFLDANPQS 359
Query: 515 GITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPL 574
+ + E I C EKD YLYY I+++PG+T+VF N I +KR+T L LK PL
Sbjct: 360 AVASRVLEGLIECAPAEKDLYLYYLIMRYPGKTMVFANGIEDIKRITPFLNELKVPSYPL 419
Query: 575 HASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGR 634
HA ++Q++RL++L++F++ +L+ TDVAARG+DIP + HVIHYHVP T+++Y+HRSGR
Sbjct: 420 HAQLDQKKRLQSLEKFKNNPKGVLVCTDVAARGIDIPSVTHVIHYHVPHTADMYVHRSGR 479
Query: 635 TARANNEGLTVVLIESDEI 653
TARAN +G+++++ E+
Sbjct: 480 TARANEDGVSILMCGPKEL 498
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 63/101 (62%), Gaps = 3/101 (2%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVD-LPDFPIDESVLSLIKK 1296
D ++HRSGRTARAN +G+++++ E+ ++ L+KK++ +FP+D S+L ++K
Sbjct: 471 DMYVHRSGRTARANEDGVSILMCGPKELSQLKRLCYRLKKKIETFINFPVDMSILDILKT 530
Query: 1297 RIDLAKSIEYLESKIKK-NRPDNWLEKAAKDMDI-IIDDEN 1335
R+ LA I L K + R + WL+ A+++ + DDE+
Sbjct: 531 RVVLAHKIVNLTRKDGRVGREEAWLKSMAQELGVESSDDED 571
Score = 61.6 bits (148), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 44/60 (73%), Gaps = 2/60 (3%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTP-VKVACVVGGMSTEKQLRILNKCPHILVATPGAL 1414
AL++APTRELA Q+ H + K +P ++V + GG++ +KQ R+LNK PH++VATPG L
Sbjct: 195 ALVVAPTRELAHQICQH-FELIKPSPNIRVMSITGGLAVQKQQRLLNKHPHVVVATPGRL 253
>sp|Q2UMY7|MAK5_ASPOR ATP-dependent RNA helicase mak5 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=mak5 PE=3 SV=1
Length = 757
Score = 301 bits (772), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 196/523 (37%), Positives = 280/523 (53%), Gaps = 71/523 (13%)
Query: 761 EDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKT 820
ED ++ W + I+ + + F TPT +Q +P L R D++G A TGSGKT
Sbjct: 177 EDDGADVSAWESLGLSPEILAGISKMKFTTPTSVQKACIPPILDGR-DVIGKASTGSGKT 235
Query: 821 LAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYAL 880
LAFGIPIL + KL + T++D +KT AL
Sbjct: 236 LAFGIPILEYYLEKLRSKTQKDS---------------------------EKTETTPIAL 268
Query: 881 ILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPGRL 937
+L+PTRELA Q+ HI + + P ++A + GG+S +KQ R+L I++ TPGR+
Sbjct: 269 VLSPTRELAHQLAKHIGEVVSHAPGVNARIALLTGGLSLQKQQRVLTNA-DIVIGTPGRV 327
Query: 938 WEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNIL---DRVTMTE--------- 985
WE + GH + ++ I +LVIDE DR++ GHF E IL DRV E
Sbjct: 328 WEVLSSGHGLIRKMQAIKFLVIDEADRLLSEGHFKEAHEILAALDRVVDGEFPDESSDES 387
Query: 986 -----TSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKS--P 1038
RQT VFSAT L+ L KG+ + S++ L LN + P
Sbjct: 388 DDELDPKSGRQTLVFSATFHRDLQQKL-AGKGKWTGGDIMSQKESMEYLLQKLNFREEKP 446
Query: 1039 KIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPG-RTLVFCNSISSVKRLTQLL 1097
+ +D+ + + L E + C EKD +LY +L HP RTLVF NSIS+V+RLTQLL
Sbjct: 447 RFIDVNPVSQMAENLKEGIVECAAMEKDLFLYTLLLYHPKHRTLVFTNSISAVRRLTQLL 506
Query: 1098 TMLKCSPLPLHASMNQRQRLKNLDRFRDQNNS---ILLATDVAARGLDIPGIEHVIHYHV 1154
L+ L LH+SM Q+ RL++++RF ++ IL+ATDVAARGLDI GI+ V+HYH
Sbjct: 507 QTLQLPALALHSSMAQKARLRSVERFSSPSSDPSSILVATDVAARGLDIKGIDFVVHYHA 566
Query: 1155 PRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLE------KKVDLPDFPID 1208
PRT++ Y+HRSGRTARA G ++++ DE+ +++ + KKV L +D
Sbjct: 567 PRTADAYVHRSGRTARAGASGKSVIICSPDEMVGVVRLAAKVHANMANRKKVPLESLELD 626
Query: 1209 ESVLSLIKKRIDLAKSIEYLESKIKKNR---PDNWLHRSGRTA 1248
V+S +K+R+ LA I ++S I K + DNWL RTA
Sbjct: 627 RRVVSRVKQRVTLAARI--VDSNIAKEKVSSEDNWL----RTA 663
Score = 267 bits (682), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 181/521 (34%), Positives = 254/521 (48%), Gaps = 110/521 (21%)
Query: 144 EDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKT 203
ED ++ W + I+ + + F TPT +Q +P L R D++G A TGSGKT
Sbjct: 177 EDDGADVSAWESLGLSPEILAGISKMKFTTPTSVQKACIPPILDGR-DVIGKASTGSGKT 235
Query: 204 LAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYAL 263
LAFGIPIL + KL + T++D +KT AL
Sbjct: 236 LAFGIPILEYYLEKLRSKTQKDS---------------------------EKTETTPIAL 268
Query: 264 ILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPGRL 320
+L+PTRELA Q+ HI + + P ++A + GG+S +KQ R+L I++ TPGR+
Sbjct: 269 VLSPTRELAHQLAKHIGEVVSHAPGVNARIALLTGGLSLQKQQRVLTNA-DIVIGTPGRV 327
Query: 321 WEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNI---LDRVTMTETSQPRQTMI 377
WE + GH + ++ I +LVIDE DR++ GHF E I LDRV
Sbjct: 328 WEVLSSGHGLIRKMQAIKFLVIDEADRLLSEGHFKEAHEILAALDRVV------------ 375
Query: 378 ESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSI 437
G FP+ + + S RQT VFSAT L+ L KG+ + S+
Sbjct: 376 -DGEFPDESSDESDDELDPKS-GRQTLVFSATFHRDLQQKL-AGKGKWTGGDIMSQKESM 432
Query: 438 KRLQDLLNIKS--PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEE 495
+ L LN + P+ +D+ + + L E + C EKD +LY +L HP
Sbjct: 433 EYLLQKLNFREEKPRFIDVNPVSQMAENLKEGIVECAAMEKDLFLYTLLLYHP------- 485
Query: 496 IQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSIS 555
KH RTLVF NSIS
Sbjct: 486 --------------------------------KH----------------RTLVFTNSIS 497
Query: 556 SVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRF---RDQNNSILLATDVAARGLDIPG 612
+V+RLTQLL L+ L LH+SM Q+ RL++++RF +SIL+ATDVAARGLDI G
Sbjct: 498 AVRRLTQLLQTLQLPALALHSSMAQKARLRSVERFSSPSSDPSSILVATDVAARGLDIKG 557
Query: 613 IEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDEI 653
I+ V+HYH PRT++ Y+HRSGRTARA G +V++ DE+
Sbjct: 558 IDFVVHYHAPRTADAYVHRSGRTARAGASGKSVIICSPDEM 598
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/123 (31%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 1223 KSIEYLESKIKKNRPDNWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLE------ 1276
K I+++ D ++HRSGRTARA G ++++ DE+ +++ +
Sbjct: 556 KGIDFVVHYHAPRTADAYVHRSGRTARAGASGKSVIICSPDEMVGVVRLAAKVHANMANR 615
Query: 1277 KKVDLPDFPIDESVLSLIKKRIDLAKSIEYLESKIKKNR---PDNWLEKAAKDMDIIIDD 1333
KKV L +D V+S +K+R+ LA I ++S I K + DNWL AA+D+ + D
Sbjct: 616 KKVPLESLELDRRVVSRVKQRVTLAARI--VDSNIAKEKVSSEDNWLRTAAEDLGVDYDS 673
Query: 1334 ENL 1336
E
Sbjct: 674 EEF 676
Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPG 1412
AL+L+PTRELA Q+ HI + + P ++A + GG+S +KQ R+L I++ TPG
Sbjct: 267 ALVLSPTRELAHQLAKHIGEVVSHAPGVNARIALLTGGLSLQKQQRVLTNA-DIVIGTPG 325
>sp|A7EAY2|MAK5_SCLS1 ATP-dependent RNA helicase mak5 OS=Sclerotinia sclerotiorum (strain
ATCC 18683 / 1980 / Ss-1) GN=mak5 PE=3 SV=1
Length = 780
Score = 297 bits (761), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 201/505 (39%), Positives = 283/505 (56%), Gaps = 61/505 (12%)
Query: 765 VQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFG 824
V+++ WV+ ++ + AL + GF PT IQS +P +LA D+VG A TGSGKTLAFG
Sbjct: 210 VEVSGWVELDLSSNTLMALSKMGFSKPTPIQSEAIPE-VLAGHDVVGKASTGSGKTLAFG 268
Query: 825 IPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAP 884
IPI+ E+ EV EL+E+ +KK+ ALIL+P
Sbjct: 269 IPIV---------------------EKWLEVYGELDEDE------LKKSTRPPTALILSP 301
Query: 885 TRELAIQVQNHILDAGKYTPVK--VACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQ 942
TRELA Q+ HI K P VA V GG+S +KQ R L+K I++ TPGRLWE I
Sbjct: 302 TRELAHQLTEHITTLCKGMPTSPYVAAVTGGLSVQKQQRQLSKA-DIIIGTPGRLWEVIS 360
Query: 943 LGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMT---------ETSQPRQTF 993
+ L ++ +LVIDE DR++ GHF E + IL+ + T +T PRQT
Sbjct: 361 SSNELSAGLKQVRFLVIDEADRLLTDGHFKEAEEILNALDRTHGNEDDDEEDTLPPRQTL 420
Query: 994 VFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKS--PKIVDLTEKIGITK 1051
VFSAT L+ L KG+ K S+ S++ L LN + PK VD+ +
Sbjct: 421 VFSATFHKGLQQKL-AGKGKQSFKDDSQ---SMEYLLKKLNFREEKPKFVDVNPISQMAA 476
Query: 1052 TLTESKILCKHDEKDSYLYYFILQHPG-RTLVFCNSISSVKRLTQLLTMLKCSPLPLHAS 1110
L E + C +EKD YLY +L HP RTL+F NSI SV+RLT +L L LH+
Sbjct: 477 NLKEGMVECGGEEKDLYLYSLLLHHPNQRTLIFTNSIHSVRRLTPMLQTLNIPAHSLHSQ 536
Query: 1111 MNQRQRLKNLDRFRDQNN--SILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRT 1168
M Q+ R++++++F NN S+L+ATDVAARGLDI G++ VIHYH+PRT+++Y+HRSGRT
Sbjct: 537 MIQKARMRSIEKFSRTNNTGSVLVATDVAARGLDIGGVQLVIHYHLPRTADMYVHRSGRT 596
Query: 1169 ARANNEGLTLVLIESDEIPLYIKMF------NSL-----EKKVDLPDFPIDESVLSLIKK 1217
ARA G +++L +E+ ++ N+L + K + ID V+S +K
Sbjct: 597 ARAAASGSSILLCGPEEVVGTRRLVAKVHAQNALHGEGKKSKFYIRSLDIDRRVVSRLKP 656
Query: 1218 RIDLAKSI-EYLESKIKKNRPDNWL 1241
R+ LAK I + +K KK D+W+
Sbjct: 657 RVTLAKKIADSALAKEKKGHDDDWV 681
Score = 263 bits (671), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 188/519 (36%), Positives = 254/519 (48%), Gaps = 127/519 (24%)
Query: 148 VQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFG 207
V+++ WV+ ++ + AL + GF PT IQS +P +LA D+VG A TGSGKTLAFG
Sbjct: 210 VEVSGWVELDLSSNTLMALSKMGFSKPTPIQSEAIPE-VLAGHDVVGKASTGSGKTLAFG 268
Query: 208 IPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAP 267
IPI+ E+ EV EL+E+ +KK+ ALIL+P
Sbjct: 269 IPIV---------------------EKWLEVYGELDEDE------LKKSTRPPTALILSP 301
Query: 268 TRELAIQVQNHILDAGKYTPVK--VACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQ 325
TRELA Q+ HI K P VA V GG+S +KQ R L+K I++ TPGRLWE I
Sbjct: 302 TRELAHQLTEHITTLCKGMPTSPYVAAVTGGLSVQKQQRQLSKA-DIIIGTPGRLWEVIS 360
Query: 326 LGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPEL 385
+ L ++ +LVIDE DR++ GHF E + IL
Sbjct: 361 SSNELSAGLKQVRFLVIDEADRLLTDGHFKEAEEIL------------------------ 396
Query: 386 KNILDRVTMTE------TSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKR 439
N LDR E T PRQT VFSAT L+ L KG S K
Sbjct: 397 -NALDRTHGNEDDDEEDTLPPRQTLVFSATFHKGLQQKL-----------AGKGKQSFK- 443
Query: 440 LQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDL 499
DS ++L+
Sbjct: 444 ------------------------------------DDSQSMEYLLKK------------ 455
Query: 500 LNIKS--PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPG-RTLVFCNSISS 556
LN + PK VD+ + L E + C +EKD YLY +L HP RTL+F NSI S
Sbjct: 456 LNFREEKPKFVDVNPISQMAANLKEGMVECGGEEKDLYLYSLLLHHPNQRTLIFTNSIHS 515
Query: 557 VKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNN--SILLATDVAARGLDIPGIE 614
V+RLT +L L LH+ M Q+ R++++++F NN S+L+ATDVAARGLDI G++
Sbjct: 516 VRRLTPMLQTLNIPAHSLHSQMIQKARMRSIEKFSRTNNTGSVLVATDVAARGLDIGGVQ 575
Query: 615 HVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDEI 653
VIHYH+PRT+++Y+HRSGRTARA G +++L +E+
Sbjct: 576 LVIHYHLPRTADMYVHRSGRTARAAASGSSILLCGPEEV 614
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTPVK--VACVVGGMSTEKQLRILNKCPHILVATPGA 1413
ALIL+PTRELA Q+ HI K P VA V GG+S +KQ R L+K I++ TPG
Sbjct: 296 ALILSPTRELAHQLTEHITTLCKGMPTSPYVAAVTGGLSVQKQQRQLSKA-DIIIGTPGR 354
Query: 1414 L 1414
L
Sbjct: 355 L 355
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 12/111 (10%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEIPLYIKMF------NSL-----EKKVDLPDFPI 1286
D ++HRSGRTARA G +++L +E+ ++ N+L + K + I
Sbjct: 587 DMYVHRSGRTARAAASGSSILLCGPEEVVGTRRLVAKVHAQNALHGEGKKSKFYIRSLDI 646
Query: 1287 DESVLSLIKKRIDLAKSI-EYLESKIKKNRPDNWLEKAAKDMDIIIDDENL 1336
D V+S +K R+ LAK I + +K KK D+W++ AA+++ + D E
Sbjct: 647 DRRVVSRLKPRVTLAKKIADSALAKEKKGHDDDWVKNAAEELGVEYDSEEF 697
>sp|Q7RZH4|MAK5_NEUCR ATP-dependent RNA helicase mak-5 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=mak-5 PE=3 SV=1
Length = 805
Score = 295 bits (755), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 192/545 (35%), Positives = 289/545 (53%), Gaps = 100/545 (18%)
Query: 765 VQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFG 824
+ M+EWV ++ +I ++ + F PT IQS +P ++A D++G A TGSGKTLAFG
Sbjct: 206 IDMSEWVPLDLSPRMISSIAKLRFSKPTVIQSKAIPE-IMAGHDVIGKASTGSGKTLAFG 264
Query: 825 IPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAP 884
IP++ ++ +A T + K+ R ALIL+P
Sbjct: 265 IPVIESWLS-----------------------------AAETRKQNKEERKGATALILSP 295
Query: 885 TRELAIQVQNHI--LDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQ 942
TRELA Q+++H+ L G T + V+GGM+ +KQ R L + I++ATPGR+WE +
Sbjct: 296 TRELAQQIRDHLQALCKGLPTAPYICSVLGGMAVQKQKRQL-QVADIVIATPGRMWEVMS 354
Query: 943 LGHFHLTELYKINYLVIDETDRMIESGHFPELKNI---LDRVTMTETSQP---------- 989
+ L L I++LV+DE DR+++ GHF E + I LDR + E ++
Sbjct: 355 SDNSVLASLRNISFLVLDEADRLLKDGHFKEAEEIFKALDRPPVEENNEDQKMGGTDEEG 414
Query: 990 ---------------------RQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKR 1028
RQT +FSAT +L+ L G+SK K S D ++
Sbjct: 415 QEEEEEDSEEEEEEEEEHVNKRQTLIFSATFNKNLQQKL---AGKSKFKATSTQD--MEY 469
Query: 1029 LQDLLNIK-SPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGR-TLVFCNS 1086
L LN + +PK VD + + L E I+C EKD YLY ++ P R LVF NS
Sbjct: 470 LLQKLNFRETPKFVDANPVHQMAENLKEGLIMCGDMEKDLYLYATLMLQPTRRALVFTNS 529
Query: 1087 ISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFR--------DQNNSILLATDVAA 1138
++SV+RLT LL L PLH+ M Q+ RL+++DRF+ + + +IL+ATDVAA
Sbjct: 530 VNSVRRLTPLLENLNLPAFPLHSGMIQQARLRSIDRFKANEGAKKKNGSAAILVATDVAA 589
Query: 1139 RGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDE-IP---LYIKMFN 1194
RGLDIP ++ VIHYHVPR +E Y+HRSGRTARA+N G +++L E +P L K+
Sbjct: 590 RGLDIPDVDLVIHYHVPRAAEDYVHRSGRTARASNSGTSILLCGPKEAVPTQRLVAKVHA 649
Query: 1195 SLEKKV-------------DLPDFPIDESVLSLIKKRIDLAKSI-EYLESKIKKNRPDNW 1240
E K L ID +++ +++R+DLAK I + +++K + D+W
Sbjct: 650 QAEVKAGNSGNNTKKLVSSGLRTIDIDRRIVAKLRERVDLAKKIADAVQAKTMGGKEDDW 709
Query: 1241 LHRSG 1245
+ ++
Sbjct: 710 MKKAA 714
Score = 164 bits (416), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 119/352 (33%), Positives = 181/352 (51%), Gaps = 45/352 (12%)
Query: 148 VQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFG 207
+ M+EWV ++ +I ++ + F PT IQS +P ++A D++G A TGSGKTLAFG
Sbjct: 206 IDMSEWVPLDLSPRMISSIAKLRFSKPTVIQSKAIPE-IMAGHDVIGKASTGSGKTLAFG 264
Query: 208 IPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAP 267
IP++ ++ +A T + K+ R ALIL+P
Sbjct: 265 IPVIESWLS-----------------------------AAETRKQNKEERKGATALILSP 295
Query: 268 TRELAIQVQNHI--LDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQ 325
TRELA Q+++H+ L G T + V+GGM+ +KQ R L + I++ATPGR+WE +
Sbjct: 296 TRELAQQIRDHLQALCKGLPTAPYICSVLGGMAVQKQKRQL-QVADIVIATPGRMWEVMS 354
Query: 326 LGHFHLTELYKINYLVIDETDRMIESGHFPELKNI---LDRVTMTETSQPRQ---TMIES 379
+ L L I++LV+DE DR+++ GHF E + I LDR + E ++ ++ T E
Sbjct: 355 SDNSVLASLRNISFLVLDEADRLLKDGHFKEAEEIFKALDRPPVEENNEDQKMGGTDEEG 414
Query: 380 GHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKR 439
E + + E RQT +FSAT +L+ L G+SK K S D ++
Sbjct: 415 QEEEEEDSEEEEEEEEEHVNKRQTLIFSATFNKNLQQKL---AGKSKFKATSTQD--MEY 469
Query: 440 LQDLLNIK-SPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGR 490
L LN + +PK VD + + L E I+C EKD YLY ++ P R
Sbjct: 470 LLQKLNFRETPKFVDANPVHQMAENLKEGLIMCGDMEKDLYLYATLMLQPTR 521
Score = 152 bits (385), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/158 (48%), Positives = 105/158 (66%), Gaps = 10/158 (6%)
Query: 500 LNIK-SPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGR-TLVFCNSISSV 557
LN + +PK VD + + L E I+C EKD YLY ++ P R LVF NS++SV
Sbjct: 474 LNFRETPKFVDANPVHQMAENLKEGLIMCGDMEKDLYLYATLMLQPTRRALVFTNSVNSV 533
Query: 558 KRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFR--------DQNNSILLATDVAARGLD 609
+RLT LL L PLH+ M Q+ RL+++DRF+ + + +IL+ATDVAARGLD
Sbjct: 534 RRLTPLLENLNLPAFPLHSGMIQQARLRSIDRFKANEGAKKKNGSAAILVATDVAARGLD 593
Query: 610 IPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVL 647
IP ++ VIHYHVPR +E Y+HRSGRTARA+N G +++L
Sbjct: 594 IPDVDLVIHYHVPRAAEDYVHRSGRTARASNSGTSILL 631
Score = 50.8 bits (120), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 1351 RYSWDALILAPTRELAIQVQNHI--LDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILV 1408
R ALIL+PTRELA Q+++H+ L G T + V+GGM+ +KQ R L + I++
Sbjct: 285 RKGATALILSPTRELAQQIRDHLQALCKGLPTAPYICSVLGGMAVQKQKRQL-QVADIVI 343
Query: 1409 ATPGAL 1414
ATPG +
Sbjct: 344 ATPGRM 349
Score = 35.4 bits (80), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Query: 1418 RIDLAKSI-EYLESKIKKNRPDNWLEKAAKDMDIIIDDENL 1457
R+DLAK I + +++K + D+W++KAA+D+ + D E L
Sbjct: 686 RVDLAKKIADAVQAKTMGGKEDDWMKKAAEDLGVDYDSEEL 726
>sp|A6R9U4|MAK5_AJECN ATP-dependent RNA helicase MAK5 OS=Ajellomyces capsulata (strain NAm1
/ WU24) GN=MAK5 PE=3 SV=1
Length = 772
Score = 293 bits (751), Expect = 5e-78, Method: Compositional matrix adjust.
Identities = 203/552 (36%), Positives = 291/552 (52%), Gaps = 76/552 (13%)
Query: 734 KLKQKKK---KKQTYTSANKELLEVDTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKT 790
++++KKK K + + E LE + +E V ++ W I I +L + F
Sbjct: 153 EIQRKKKPAPKHDIQSGISFEALEEEVDGDE---VDVSGWDPLGISAEIQTSLSKLRFAK 209
Query: 791 PTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV-NKLENPTEEDENDSGLE 849
PT IQ+ +P + + D+VG A TGSGKTLAFGIPIL + N+ E P + ND+ L
Sbjct: 210 PTPIQTACIP-LIASGHDVVGKASTGSGKTLAFGIPILEYYLKNRREEPVQH--NDAELS 266
Query: 850 EEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQNHILDAGKYTP---VK 906
+ ALIL+PTRELA Q+ HI P +
Sbjct: 267 SKYP------------------------IALILSPTRELAHQLSKHITALCTNAPNINAR 302
Query: 907 VACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMI 966
+A + GG+S +KQ R+L I++ TPGRLW+ I GH L + I +LVIDE DR++
Sbjct: 303 IALLTGGLSVQKQQRVLANA-DIVIGTPGRLWDVISTGHGLLRKFQNIKFLVIDEADRLL 361
Query: 967 ESGHFPELKNIL---DR------VTMTETSQ-------PRQTFVFSATLTHSLKNSLNLK 1010
GHF E++ IL DR VT S+ PRQT VFSAT L+ L
Sbjct: 362 SEGHFKEVEEILTALDRKEIHHKVTADSESEDDASRESPRQTLVFSATFHKGLQQKLA-G 420
Query: 1011 KGQSKSKKVSKGDPSIKRLQDLLNIKS--PKIVDLTEKIGITKTLTESKILCKHDEKDSY 1068
KG+ + S++ L LN + PK +D+ + + L E + C EKD Y
Sbjct: 421 KGRYFDGDLLDDKQSMEYLLKKLNFREDRPKFIDVNPVAQMAENLKEGLVECPAMEKDLY 480
Query: 1069 LYYFILQHP-GRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQN 1127
LY +L HP RTLVF NSIS+V+RLT L L L LH+SM Q+ RL++++RF
Sbjct: 481 LYTLMLYHPQHRTLVFTNSISAVRRLTAFLQNLNLPALALHSSMAQKARLRSVERFSSPT 540
Query: 1128 ---NSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESD 1184
+SIL+ATDVAARGLDI GI+ +IHYHVPRT++ Y+HRSGRTARA+ G +++L +
Sbjct: 541 ADPSSILVATDVAARGLDIKGIDLIIHYHVPRTADTYVHRSGRTARASASGKSILLCAPE 600
Query: 1185 EIPLYIKMFNSLE--------------KKVDLPDFPIDESVLSLIKKRIDLAKSI-EYLE 1229
EI ++ + K++ L +D V++ ++ R+ LAK I +
Sbjct: 601 EIVGVARLAAKVHASSTASSSSSSSVTKRLPLHSVDLDRRVIARVRPRVALAKKITNHAL 660
Query: 1230 SKIKKNRPDNWL 1241
+K K + ++WL
Sbjct: 661 AKEKLSSENDWL 672
Score = 266 bits (679), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 194/556 (34%), Positives = 268/556 (48%), Gaps = 125/556 (22%)
Query: 117 KLKQKKK---KKQTYTSANKELLEVDTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKT 173
++++KKK K + + E LE + +E V ++ W I I +L + F
Sbjct: 153 EIQRKKKPAPKHDIQSGISFEALEEEVDGDE---VDVSGWDPLGISAEIQTSLSKLRFAK 209
Query: 174 PTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV-NKLENPTEEDENDSGLE 232
PT IQ+ +P + + D+VG A TGSGKTLAFGIPIL + N+ E P + ND+ L
Sbjct: 210 PTPIQTACIP-LIASGHDVVGKASTGSGKTLAFGIPILEYYLKNRREEPVQH--NDAELS 266
Query: 233 EEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQNHILDAGKYTP---VK 289
+ ALIL+PTRELA Q+ HI P +
Sbjct: 267 SKYP------------------------IALILSPTRELAHQLSKHITALCTNAPNINAR 302
Query: 290 VACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMI 349
+A + GG+S +KQ R+L I++ TPGRLW+ I GH L + I +LVIDE DR++
Sbjct: 303 IALLTGGLSVQKQQRVLANA-DIVIGTPGRLWDVISTGHGLLRKFQNIKFLVIDEADRLL 361
Query: 350 ESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNILDRVTMTETSQ-------PRQ 402
GHF E++ IL T+ R K I +VT S+ PRQ
Sbjct: 362 SEGHFKEVEEIL-------TALDR------------KEIHHKVTADSESEDDASRESPRQ 402
Query: 403 TFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKS--PKIVDLTEKIGI 460
T VFSAT L+ L KG+ + S++ L LN + PK +D+ +
Sbjct: 403 TLVFSATFHKGLQQKLA-GKGRYFDGDLLDDKQSMEYLLKKLNFREDRPKFIDVNPVAQM 461
Query: 461 TKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDLLNIKSPKIVDLTEKIGITKTL 520
+ L E + C EKD YLY +L HP
Sbjct: 462 AENLKEGLVECPAMEKDLYLYTLMLYHP-------------------------------- 489
Query: 521 TESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQ 580
QH RTLVF NSIS+V+RLT L L L LH+SM Q
Sbjct: 490 ---------------------QH--RTLVFTNSISAVRRLTAFLQNLNLPALALHSSMAQ 526
Query: 581 RQRLKNLDRFRDQN---NSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTAR 637
+ RL++++RF +SIL+ATDVAARGLDI GI+ +IHYHVPRT++ Y+HRSGRTAR
Sbjct: 527 KARLRSVERFSSPTADPSSILVATDVAARGLDIKGIDLIIHYHVPRTADTYVHRSGRTAR 586
Query: 638 ANNEGLTVVLIESDEI 653
A+ G +++L +EI
Sbjct: 587 ASASGKSILLCAPEEI 602
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 15/116 (12%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLE--------------KKVDLPD 1283
D ++HRSGRTARA+ G +++L +EI ++ + K++ L
Sbjct: 575 DTYVHRSGRTARASASGKSILLCAPEEIVGVARLAAKVHASSTASSSSSSSVTKRLPLHS 634
Query: 1284 FPIDESVLSLIKKRIDLAKSI-EYLESKIKKNRPDNWLEKAAKDMDIIIDDENLIQ 1338
+D V++ ++ R+ LAK I + +K K + ++WL AA D+ + D E +
Sbjct: 635 VDLDRRVIARVRPRVALAKKITNHALAKEKLSSENDWLRSAADDLGVDYDSEEFAE 690
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPG 1412
ALIL+PTRELA Q+ HI P ++A + GG+S +KQ R+L I++ TPG
Sbjct: 272 ALILSPTRELAHQLSKHITALCTNAPNINARIALLTGGLSVQKQQRVLANA-DIVIGTPG 330
Query: 1413 AL 1414
L
Sbjct: 331 RL 332
>sp|Q757I6|MAK5_ASHGO ATP-dependent RNA helicase MAK5 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MAK5 PE=3 SV=1
Length = 752
Score = 291 bits (746), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 185/537 (34%), Positives = 281/537 (52%), Gaps = 88/537 (16%)
Query: 751 ELLEVDTSNNEDMFVQMAEWVK-FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDI 809
E+ D +E ++ W + T+++ L + GF PT+IQ +P AL DI
Sbjct: 162 EIFNKDIGLDEAEAPELPSWTNTMKLSATVLQGLSRLGFSNPTEIQLQSIPKALDGH-DI 220
Query: 810 VGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEF 869
+G A TGSGKTLA+GIPIL GI+ D+ DS
Sbjct: 221 MGKASTGSGKTLAYGIPILEGII--------RDDTDS----------------------- 249
Query: 870 VKKTRNKLYALILAPTRELAIQVQNHILDAG----KYTPVKVACVVGGMSTEKQLRIL-- 923
+ LI PTRELA QV +H+ + G K P + C+ GG+S +KQ R+L
Sbjct: 250 ------RPIGLIFTPTRELAHQVTDHLREVGALLVKRNPYSIMCLTGGLSIQKQERLLKY 303
Query: 924 NKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTM 983
++VATPGR E ++ + K++ LV+DE DR+++ GHF E + IL ++
Sbjct: 304 KGSARVVVATPGRFLELLEKDQTLIDRFAKVDTLVLDEADRLLQDGHFEEFERILKHLSR 363
Query: 984 TE-----TSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLN---- 1034
+T ++SAT + N L+ + KK+ K PS ++++L
Sbjct: 364 ARKFTNGKKHGWKTMIYSATFSLDYFNKLS----NTSWKKMKKA-PSENEMEEVLKHLMT 418
Query: 1035 ----IKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSV 1090
P I+D + + + ES I C E+D Y+YYF+ +PG TLVFCN+I SV
Sbjct: 419 KIPFRGKPLIIDTNPEQKVASQIKESLIECLPTERDLYVYYFVTLYPGTTLVFCNAIDSV 478
Query: 1091 KRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNN--------SILLATDVAARGLD 1142
K+L L LK S +H+SM Q+ RLK+L++F++Q ++L+A+DVAARGLD
Sbjct: 479 KKLNAYLHNLKISAFQIHSSMLQKNRLKSLEKFQEQAKKNQALNKPTVLIASDVAARGLD 538
Query: 1143 IPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEI--PLYIKMFNSLEKKV 1200
IPGI+HVIHYH+PR++++YIHRSGRTARA NEG+ + + E PL K+ L K
Sbjct: 539 IPGIQHVIHYHLPRSADVYIHRSGRTARAENEGVAVTICSPQEAMGPLR-KLRRVLAGKA 597
Query: 1201 ---------DLPDFPIDESVLSLIKKRIDLAKSI---EYLESKIKKNRPDNWLHRSG 1245
++ P++ ++S +++R LA ++ E S + K+ DNWL ++
Sbjct: 598 GSKGKRWQNEIALLPVEPDIVSQLRERSRLASALADSEIATSSLSKD--DNWLKKAA 652
Score = 258 bits (659), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 173/545 (31%), Positives = 257/545 (47%), Gaps = 141/545 (25%)
Query: 134 ELLEVDTSNNEDMFVQMAEWVK-FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDI 192
E+ D +E ++ W + T+++ L + GF PT+IQ +P AL DI
Sbjct: 162 EIFNKDIGLDEAEAPELPSWTNTMKLSATVLQGLSRLGFSNPTEIQLQSIPKALDGH-DI 220
Query: 193 VGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEF 252
+G A TGSGKTLA+GIPIL GI+ D+ DS
Sbjct: 221 MGKASTGSGKTLAYGIPILEGII--------RDDTDS----------------------- 249
Query: 253 VKKTRNKLYALILAPTRELAIQVQNHILDAG----KYTPVKVACVVGGMSTEKQLRILN- 307
+ LI PTRELA QV +H+ + G K P + C+ GG+S +KQ R+L
Sbjct: 250 ------RPIGLIFTPTRELAHQVTDHLREVGALLVKRNPYSIMCLTGGLSIQKQERLLKY 303
Query: 308 -KCPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTM 366
++VATPGR E ++ + K++ LV+DE DR+++ G
Sbjct: 304 KGSARVVVATPGRFLELLEKDQTLIDRFAKVDTLVLDEADRLLQDG-------------- 349
Query: 367 TETSQPRQTMIESGHFPELKNILDRVTMTET-----SQPRQTFVFSATLTHSLKNSLNLK 421
HF E + IL ++ +T ++SAT + N L+
Sbjct: 350 --------------HFEEFERILKHLSRARKFTNGKKHGWKTMIYSATFSLDYFNKLS-- 393
Query: 422 KGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLY 481
+ S K+++ K+P +E + L
Sbjct: 394 ------------NTSWKKMK-----KAPS----------------------ENEMEEVLK 414
Query: 482 YFILQHPGRTLCEEIQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFIL 541
+ + + P R P I+D + + + ES I C E+D Y+YYF+
Sbjct: 415 HLMTKIPFRG------------KPLIIDTNPEQKVASQIKESLIECLPTERDLYVYYFVT 462
Query: 542 QHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNN------ 595
+PG TLVFCN+I SVK+L L LK S +H+SM Q+ RLK+L++F++Q
Sbjct: 463 LYPGTTLVFCNAIDSVKKLNAYLHNLKISAFQIHSSMLQKNRLKSLEKFQEQAKKNQALN 522
Query: 596 --SILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDEI 653
++L+A+DVAARGLDIPGI+HVIHYH+PR++++YIHRSGRTARA NEG+ V + E
Sbjct: 523 KPTVLIASDVAARGLDIPGIQHVIHYHLPRSADVYIHRSGRTARAENEGVAVTICSPQEA 582
Query: 654 --PLK 656
PL+
Sbjct: 583 MGPLR 587
Score = 53.9 bits (128), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 37/63 (58%), Gaps = 6/63 (9%)
Query: 1356 ALILAPTRELAIQVQNHILDAG----KYTPVKVACVVGGMSTEKQLRIL--NKCPHILVA 1409
LI PTRELA QV +H+ + G K P + C+ GG+S +KQ R+L ++VA
Sbjct: 253 GLIFTPTRELAHQVTDHLREVGALLVKRNPYSIMCLTGGLSIQKQERLLKYKGSARVVVA 312
Query: 1410 TPG 1412
TPG
Sbjct: 313 TPG 315
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 61/112 (54%), Gaps = 17/112 (15%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEI--PLYIKMFNSLEKKV---------DLPDFPI 1286
D ++HRSGRTARA NEG+ + + E PL K+ L K ++ P+
Sbjct: 555 DVYIHRSGRTARAENEGVAVTICSPQEAMGPLR-KLRRVLAGKAGSKGKRWQNEIALLPV 613
Query: 1287 DESVLSLIKKRIDLAKSI---EYLESKIKKNRPDNWLEKAAKDMDIIIDDEN 1335
+ ++S +++R LA ++ E S + K+ DNWL+KAA D+ I +D ++
Sbjct: 614 EPDIVSQLRERSRLASALADSEIATSSLSKD--DNWLKKAADDLGIDVDSDD 663
>sp|A4REU9|MAK5_MAGO7 ATP-dependent RNA helicase MAK5 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=MAK5 PE=3 SV=2
Length = 760
Score = 291 bits (744), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 191/528 (36%), Positives = 281/528 (53%), Gaps = 63/528 (11%)
Query: 746 TSANKELLEVDTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLA 805
T + L E+D + D ++EW + E I+ ++ + F PT IQ+ +P +LA
Sbjct: 168 TGSFAALAEIDET---DEGADVSEWEPLGLSEEIMSSIAKLKFAKPTAIQAATIPE-ILA 223
Query: 806 RKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESAN 865
D+VG A TGSGKTLAFGIPI V + L ++
Sbjct: 224 GHDVVGKASTGSGKTLAFGIPI---------------------------VEKWLSINAST 256
Query: 866 TTEFVKKTRNKL-YALILAPTRELAIQVQNHI--LDAGKYTPVKVACVVGGMSTEKQLRI 922
++ V + K AL+L+PTRELA Q+ +HI L AG T V V GG+S KQ R
Sbjct: 257 QSKRVAEGETKTPIALVLSPTRELAHQLTDHIKNLCAGLATSPYVCSVTGGLSVHKQQRQ 316
Query: 923 LNKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVT 982
L K I+V TPGRLWE + + I +LV+DE DR++ GHF + K+I + +
Sbjct: 317 LEKA-DIVVGTPGRLWEVLSSSTKLIQAFRGIKFLVVDEADRLLSEGHFKDAKDIFEGLD 375
Query: 983 MTET--------SQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLN 1034
ET + RQT VFSAT L+ L K + + +K+L+
Sbjct: 376 KVETDDDGIIRGGKARQTLVFSATFNKGLQQKLAGKGRFDLATDSQSMEYLLKKLKFREE 435
Query: 1035 IKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPG-RTLVFCNSISSVKRL 1093
I PK +D+ + + L E + C EKD YLY +L HP RTLVF NSISSV+RL
Sbjct: 436 I--PKFIDVNPVSQMAEGLKEGIVECGAMEKDLYLYSLLLMHPTQRTLVFTNSISSVRRL 493
Query: 1094 TQLLTMLKCSPLPLHASMNQRQRLKNLDRF---RDQNNSILLATDVAARGLDIPGIEHVI 1150
T +L L + LH+ M Q+ RL++++RF + + SIL+ATDVAARGLDI GI+ VI
Sbjct: 494 TPMLQQLTLPVIALHSQMIQKARLRSVERFTSSKPGSASILIATDVAARGLDIRGIDVVI 553
Query: 1151 HYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLE------------- 1197
HYHVPRT++ Y+HRSGRTARA++ GL++++ +E+ ++ +
Sbjct: 554 HYHVPRTADAYVHRSGRTARADSSGLSILICAPEEVTPTRRLVAKVHASAAAKGKKKGSA 613
Query: 1198 KKVDLPDFPIDESVLSLIKKRIDLAKSI-EYLESKIKKNRPDNWLHRS 1244
V + +D ++S +++R+ LAK I + +K K + DNW+ ++
Sbjct: 614 GGVFVHSVELDRRLVSKLRERVQLAKQIADSTLAKEKIGKEDNWMQKA 661
Score = 157 bits (398), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/153 (50%), Positives = 107/153 (69%), Gaps = 4/153 (2%)
Query: 505 PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPG-RTLVFCNSISSVKRLTQL 563
PK +D+ + + L E + C EKD YLY +L HP RTLVF NSISSV+RLT +
Sbjct: 437 PKFIDVNPVSQMAEGLKEGIVECGAMEKDLYLYSLLLMHPTQRTLVFTNSISSVRRLTPM 496
Query: 564 LTMLKCSPLPLHASMNQRQRLKNLDRF---RDQNNSILLATDVAARGLDIPGIEHVIHYH 620
L L + LH+ M Q+ RL++++RF + + SIL+ATDVAARGLDI GI+ VIHYH
Sbjct: 497 LQQLTLPVIALHSQMIQKARLRSVERFTSSKPGSASILIATDVAARGLDIRGIDVVIHYH 556
Query: 621 VPRTSEIYIHRSGRTARANNEGLTVVLIESDEI 653
VPRT++ Y+HRSGRTARA++ GL++++ +E+
Sbjct: 557 VPRTADAYVHRSGRTARADSSGLSILICAPEEV 589
Score = 156 bits (394), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 120/369 (32%), Positives = 170/369 (46%), Gaps = 58/369 (15%)
Query: 129 TSANKELLEVDTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLA 188
T + L E+D + D ++EW + E I+ ++ + F PT IQ+ +P +LA
Sbjct: 168 TGSFAALAEIDET---DEGADVSEWEPLGLSEEIMSSIAKLKFAKPTAIQAATIPE-ILA 223
Query: 189 RKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESAN 248
D+VG A TGSGKTLAFGIPI V + L ++
Sbjct: 224 GHDVVGKASTGSGKTLAFGIPI---------------------------VEKWLSINAST 256
Query: 249 TTEFVKKTRNKL-YALILAPTRELAIQVQNHI--LDAGKYTPVKVACVVGGMSTEKQLRI 305
++ V + K AL+L+PTRELA Q+ +HI L AG T V V GG+S KQ R
Sbjct: 257 QSKRVAEGETKTPIALVLSPTRELAHQLTDHIKNLCAGLATSPYVCSVTGGLSVHKQQRQ 316
Query: 306 LNKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVT 365
L K I+V TPGRLWE + + I +LV+DE DR++ GHF + K+I + +
Sbjct: 317 LEKA-DIVVGTPGRLWEVLSSSTKLIQAFRGIKFLVVDEADRLLSEGHFKDAKDIFEGLD 375
Query: 366 MTETSQPRQTMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQS 425
ET D + + RQT VFSAT L+ L K
Sbjct: 376 KVET--------------------DDDGIIRGGKARQTLVFSATFNKGLQQKLAGKGRFD 415
Query: 426 KSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFIL 485
+ + +K+L+ I PK +D+ + + L E + C EKD YLY +L
Sbjct: 416 LATDSQSMEYLLKKLKFREEI--PKFIDVNPVSQMAEGLKEGIVECGAMEKDLYLYSLLL 473
Query: 486 QHPG-RTLC 493
HP RTL
Sbjct: 474 MHPTQRTLV 482
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 63/113 (55%), Gaps = 14/113 (12%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLE-------------KKVDLPDF 1284
D ++HRSGRTARA++ GL++++ +E+ ++ + V +
Sbjct: 562 DAYVHRSGRTARADSSGLSILICAPEEVTPTRRLVAKVHASAAAKGKKKGSAGGVFVHSV 621
Query: 1285 PIDESVLSLIKKRIDLAKSI-EYLESKIKKNRPDNWLEKAAKDMDIIIDDENL 1336
+D ++S +++R+ LAK I + +K K + DNW++KAA+++ + D E+L
Sbjct: 622 ELDRRLVSKLRERVQLAKQIADSTLAKEKIGKEDNWMQKAAEELGVEYDSEDL 674
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 1356 ALILAPTRELAIQVQNHI--LDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGA 1413
AL+L+PTRELA Q+ +HI L AG T V V GG+S KQ R L K I+V TPG
Sbjct: 271 ALVLSPTRELAHQLTDHIKNLCAGLATSPYVCSVTGGLSVHKQQRQLEKA-DIVVGTPGR 329
Query: 1414 L------SLKRIDLAKSIEYL 1428
L S K I + I++L
Sbjct: 330 LWEVLSSSTKLIQAFRGIKFL 350
Score = 35.8 bits (81), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 1417 KRIDLAKSI-EYLESKIKKNRPDNWLEKAAKDMDIIIDDENLIQP----------KANSR 1465
+R+ LAK I + +K K + DNW++KAA+++ + D E+L + K+ +
Sbjct: 633 ERVQLAKQIADSTLAKEKIGKEDNWMQKAAEELGVEYDSEDLEKASNWSGRGSGRKSKQK 692
Query: 1466 ENALMSKA-LVSKRKELQSLLGKSVQS 1491
E MSKA + S + +L+ LL K + S
Sbjct: 693 EAKEMSKAEVASLKAQLKQLLSKRINS 719
>sp|Q0CI35|MAK5_ASPTN ATP-dependent RNA helicase mak5 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=mak5 PE=3 SV=2
Length = 774
Score = 290 bits (742), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 190/515 (36%), Positives = 279/515 (54%), Gaps = 66/515 (12%)
Query: 761 EDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKT 820
ED V ++ W + I+ +L + F +PT +Q +P +L D+VG A TGSGKT
Sbjct: 195 EDDGVDISAWESLGLSPEILNSLSKLKFSSPTAVQKSCIPP-ILDGHDVVGKASTGSGKT 253
Query: 821 LAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYAL 880
LAFGIPIL E LE+ E+ N + K AL
Sbjct: 254 LAFGIPIL------------------------EYYLEKKRRETKNKDD---KKETSPIAL 286
Query: 881 ILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPGRL 937
IL+PTRELA Q+ HI + + P ++A + GG+S +KQ R+LN I++ TPGR+
Sbjct: 287 ILSPTRELAHQLVKHIGEVITHAPGVNARIALLTGGLSVQKQQRLLNGA-DIVIGTPGRV 345
Query: 938 WEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQ--------- 988
WE + G ++++ +I YLV+DE DR++ GHF E IL + E +
Sbjct: 346 WEVLSGGQGLISKMKEIKYLVVDEADRLLSEGHFKEAHEILAALDREEINDFPGAEEDES 405
Query: 989 -------PRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKS--PK 1039
RQT VFSAT L+ L K + S ++K + S++ L LN + PK
Sbjct: 406 DDEDSKTQRQTLVFSATFHRDLQQKLAGKGKWTGSDLMNKQE-SMEYLLKKLNFREEKPK 464
Query: 1040 IVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHP-GRTLVFCNSISSVKRLTQLLT 1098
+D+ + + L E + C EKD YLY +L HP RTLVF NSIS+V+RLTQ L
Sbjct: 465 FIDVNPVSQMAEGLKEGIVECAAMEKDLYLYTLLLYHPKHRTLVFTNSISAVRRLTQFLQ 524
Query: 1099 MLKCSPLPLHASMNQRQRLKNLDRFRDQN---NSILLATDVAARGLDIPGIEHVIHYHVP 1155
L+ L LH+SM Q+ RL++++RF ++IL+ATDVAARGLDI GI+ VIHYH P
Sbjct: 525 ALQLPALALHSSMAQKARLRSVERFSSPTADPSTILVATDVAARGLDIKGIDFVIHYHAP 584
Query: 1156 RTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLE------KKVDLPDFPIDE 1209
RT++ Y+HRSGRTARA G ++++ +E+ +++ + K++ L +D
Sbjct: 585 RTADTYVHRSGRTARAGASGKSVIICAPEEMVGVVRLAAKVHANMANGKRLPLESLELDR 644
Query: 1210 SVLSLIKKRIDLAKSIEYLESKIKKNR---PDNWL 1241
++S +K+R+ LA I ++ I K + DNWL
Sbjct: 645 RIVSRVKQRVTLAARI--CDANIAKEKVSAEDNWL 677
Score = 259 bits (663), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 181/518 (34%), Positives = 257/518 (49%), Gaps = 105/518 (20%)
Query: 144 EDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKT 203
ED V ++ W + I+ +L + F +PT +Q +P +L D+VG A TGSGKT
Sbjct: 195 EDDGVDISAWESLGLSPEILNSLSKLKFSSPTAVQKSCIPP-ILDGHDVVGKASTGSGKT 253
Query: 204 LAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYAL 263
LAFGIPIL E LE+ E+ N + K AL
Sbjct: 254 LAFGIPIL------------------------EYYLEKKRRETKNKDD---KKETSPIAL 286
Query: 264 ILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPGRL 320
IL+PTRELA Q+ HI + + P ++A + GG+S +KQ R+LN I++ TPGR+
Sbjct: 287 ILSPTRELAHQLVKHIGEVITHAPGVNARIALLTGGLSVQKQQRLLNGA-DIVIGTPGRV 345
Query: 321 WEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESG 380
WE + G ++++ +I YLV+DE DR++ GHF E IL + E +
Sbjct: 346 WEVLSGGQGLISKMKEIKYLVVDEADRLLSEGHFKEAHEILAALDREEIND--------- 396
Query: 381 HFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRL 440
FP + ++T RQT VFSAT L+ L K + S ++K + S++ L
Sbjct: 397 -FPGAEEDESDDEDSKTQ--RQTLVFSATFHRDLQQKLAGKGKWTGSDLMNKQE-SMEYL 452
Query: 441 QDLLNIKS--PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQD 498
LN + PK +D+ + + L E + C EKD YLY +L HP
Sbjct: 453 LKKLNFREEKPKFIDVNPVSQMAEGLKEGIVECAAMEKDLYLYTLLLYHP---------- 502
Query: 499 LLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVK 558
KH RTLVF NSIS+V+
Sbjct: 503 -----------------------------KH----------------RTLVFTNSISAVR 517
Query: 559 RLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQN---NSILLATDVAARGLDIPGIEH 615
RLTQ L L+ L LH+SM Q+ RL++++RF ++IL+ATDVAARGLDI GI+
Sbjct: 518 RLTQFLQALQLPALALHSSMAQKARLRSVERFSSPTADPSTILVATDVAARGLDIKGIDF 577
Query: 616 VIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDEI 653
VIHYH PRT++ Y+HRSGRTARA G +V++ +E+
Sbjct: 578 VIHYHAPRTADTYVHRSGRTARAGASGKSVIICAPEEM 615
Score = 54.3 bits (129), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 64/123 (52%), Gaps = 11/123 (8%)
Query: 1223 KSIEYLESKIKKNRPDNWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLE------ 1276
K I+++ D ++HRSGRTARA G ++++ +E+ +++ +
Sbjct: 573 KGIDFVIHYHAPRTADTYVHRSGRTARAGASGKSVIICAPEEMVGVVRLAAKVHANMANG 632
Query: 1277 KKVDLPDFPIDESVLSLIKKRIDLAKSIEYLESKIKKNR---PDNWLEKAAKDMDIIIDD 1333
K++ L +D ++S +K+R+ LA I ++ I K + DNWL+ AA+++ + D
Sbjct: 633 KRLPLESLELDRRIVSRVKQRVTLAARI--CDANIAKEKVSAEDNWLKNAAEELGVDYDS 690
Query: 1334 ENL 1336
E
Sbjct: 691 EEF 693
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%), Gaps = 4/60 (6%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPG 1412
ALIL+PTRELA Q+ HI + + P ++A + GG+S +KQ R+LN I++ TPG
Sbjct: 285 ALILSPTRELAHQLVKHIGEVITHAPGVNARIALLTGGLSVQKQQRLLNGA-DIVIGTPG 343
>sp|Q4WMS3|MAK5_ASPFU ATP-dependent RNA helicase mak5 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=mak5 PE=3
SV=2
Length = 777
Score = 290 bits (741), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 189/514 (36%), Positives = 279/514 (54%), Gaps = 60/514 (11%)
Query: 761 EDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKT 820
ED ++ W + I+ L + F +PT +Q +P +L D++G A TGSGKT
Sbjct: 194 EDDGADVSAWDSLGLSPEILTGLSKMKFGSPTSVQEACIPQ-ILEGHDVIGKASTGSGKT 252
Query: 821 LAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYAL 880
LAFGIPIL E LE+ ++ + E + + + AL
Sbjct: 253 LAFGIPIL------------------------EHYLEKKRDDISAQKEQMSEKDSTPIAL 288
Query: 881 ILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPGRL 937
IL+PTRELA Q+ HI + P ++A + GG+S +KQ R+L+ I++ TPGR+
Sbjct: 289 ILSPTRELAHQLSKHIGELIAQAPGVNARIALLTGGLSVQKQQRLLSGA-DIVIGTPGRV 347
Query: 938 WEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNIL---DRVTMTET-------- 986
WE + G + ++ +I +LV+DE DR++ GHF E++ IL DRV E
Sbjct: 348 WEILSTGQGLIRKMQQIKFLVVDEADRLLSEGHFKEVEEILNSLDRVEDGEVPDGEDQAS 407
Query: 987 ------SQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKS--P 1038
S RQT VFSAT L+ L K+ ++ + K + S+ L LN + P
Sbjct: 408 EEESDPSSERQTLVFSATFHRDLQQKLAGKRKWTRGDIMDKKE-SMDYLLQKLNFREEKP 466
Query: 1039 KIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHP-GRTLVFCNSISSVKRLTQLL 1097
K +D+ + L E + C EKD +LY +L HP RTLVF NSIS+V+RLT+LL
Sbjct: 467 KFIDMNPISQMADNLKEGIVECGAMEKDLFLYTLLLYHPKHRTLVFTNSISAVRRLTKLL 526
Query: 1098 TMLKCSPLPLHASMNQRQRLKNLDRFRDQNN---SILLATDVAARGLDIPGIEHVIHYHV 1154
L+ L LH+SM Q+ RL++++RF ++ +IL+ATDVAARGLDI GI+ VIHYH
Sbjct: 527 QTLQLPALALHSSMAQKARLRSVERFSSPSSDPSTILIATDVAARGLDIKGIDLVIHYHA 586
Query: 1155 PRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLE------KKVDLPDFPID 1208
PRT++ Y+HRSGRTARA G ++++ DE+ +++ + KK+ L +D
Sbjct: 587 PRTADTYVHRSGRTARAGASGKSVIICGPDEMVGVVRLAAKVHANMANGKKLPLESLELD 646
Query: 1209 ESVLSLIKKRIDLAKSIEYLE-SKIKKNRPDNWL 1241
V+S +K R+ LA I +K K + DNWL
Sbjct: 647 RRVVSRVKPRVSLASRITDANIAKEKISAEDNWL 680
Score = 257 bits (656), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 174/518 (33%), Positives = 260/518 (50%), Gaps = 101/518 (19%)
Query: 144 EDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKT 203
ED ++ W + I+ L + F +PT +Q +P +L D++G A TGSGKT
Sbjct: 194 EDDGADVSAWDSLGLSPEILTGLSKMKFGSPTSVQEACIPQ-ILEGHDVIGKASTGSGKT 252
Query: 204 LAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYAL 263
LAFGIPIL E LE+ ++ + E + + + AL
Sbjct: 253 LAFGIPIL------------------------EHYLEKKRDDISAQKEQMSEKDSTPIAL 288
Query: 264 ILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPGRL 320
IL+PTRELA Q+ HI + P ++A + GG+S +KQ R+L+ I++ TPGR+
Sbjct: 289 ILSPTRELAHQLSKHIGELIAQAPGVNARIALLTGGLSVQKQQRLLSGA-DIVIGTPGRV 347
Query: 321 WEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESG 380
WE + G + ++ +I +LV+DE DR++ GHF E++ IL+ + +E G
Sbjct: 348 WEILSTGQGLIRKMQQIKFLVVDEADRLLSEGHFKEVEEILNSL----------DRVEDG 397
Query: 381 HFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRL 440
P+ ++ ++ S RQT VFSAT L+ L K+ ++ + K + S+ L
Sbjct: 398 EVPDGEDQA-SEEESDPSSERQTLVFSATFHRDLQQKLAGKRKWTRGDIMDKKE-SMDYL 455
Query: 441 QDLLNIKS--PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQD 498
LN + PK +D+ + L E + C EKD +LY +L HP
Sbjct: 456 LQKLNFREEKPKFIDMNPISQMADNLKEGIVECGAMEKDLFLYTLLLYHP---------- 505
Query: 499 LLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVK 558
KH RTLVF NSIS+V+
Sbjct: 506 -----------------------------KH----------------RTLVFTNSISAVR 520
Query: 559 RLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQN---NSILLATDVAARGLDIPGIEH 615
RLT+LL L+ L LH+SM Q+ RL++++RF + ++IL+ATDVAARGLDI GI+
Sbjct: 521 RLTKLLQTLQLPALALHSSMAQKARLRSVERFSSPSSDPSTILIATDVAARGLDIKGIDL 580
Query: 616 VIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDEI 653
VIHYH PRT++ Y+HRSGRTARA G +V++ DE+
Sbjct: 581 VIHYHAPRTADTYVHRSGRTARAGASGKSVIICGPDEM 618
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLE------KKVDLPDFPIDESVL 1291
D ++HRSGRTARA G ++++ DE+ +++ + KK+ L +D V+
Sbjct: 591 DTYVHRSGRTARAGASGKSVIICGPDEMVGVVRLAAKVHANMANGKKLPLESLELDRRVV 650
Query: 1292 SLIKKRIDLAKSIEYLE-SKIKKNRPDNWLEKAAKDMDIIIDDENLIQPN 1340
S +K R+ LA I +K K + DNWL AA+D+ + D E + N
Sbjct: 651 SRVKPRVSLASRITDANIAKEKISAEDNWLRNAAEDLGVEYDSEEFDESN 700
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPG 1412
ALIL+PTRELA Q+ HI + P ++A + GG+S +KQ R+L+ I++ TPG
Sbjct: 287 ALILSPTRELAHQLSKHIGELIAQAPGVNARIALLTGGLSVQKQQRLLSGA-DIVIGTPG 345
>sp|A1DMT9|MAK5_NEOFI ATP-dependent RNA helicase mak5 OS=Neosartorya fischeri (strain ATCC
1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=mak5 PE=3
SV=1
Length = 777
Score = 289 bits (739), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 191/514 (37%), Positives = 279/514 (54%), Gaps = 60/514 (11%)
Query: 761 EDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKT 820
ED ++ W + I+ L + F +PT +Q +P +L D++G A TGSGKT
Sbjct: 194 EDDGADVSAWDSLGLSPEILTGLSKMKFASPTSVQEACIPQ-ILEGHDVIGKASTGSGKT 252
Query: 821 LAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYAL 880
LAFGIPIL + LE++ +++ E E++S + + AL
Sbjct: 253 LAFGIPIL----------------EHYLEKKRDDISAEKEKKSEKDSTPI--------AL 288
Query: 881 ILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPGRL 937
IL+PTRELA Q+ HI + P ++A + GG+S +KQ R+L+ I++ TPGR+
Sbjct: 289 ILSPTRELAHQLSKHIGELIAQAPGVNARIALLTGGLSVQKQQRLLSGA-DIVIGTPGRV 347
Query: 938 WEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELK---NILDRVTMTET-------- 986
WE + G + ++ +I +LV+DE DR++ GHF E++ N LDRV E
Sbjct: 348 WEILSTGQGLIRKMQQIKFLVVDEADRLLSEGHFKEVEEILNALDRVEDGEVPGGENQAS 407
Query: 987 ------SQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKS--P 1038
S RQT VFSAT L+ L KG+ V S+ L LN + P
Sbjct: 408 EEESDPSSERQTLVFSATFHRDLQQKL-AGKGKWTGGDVMDKKESMDYLLQKLNFREEKP 466
Query: 1039 KIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHP-GRTLVFCNSISSVKRLTQLL 1097
K +D+ + L E + C EKD +LY +L HP RTLVF NSIS+V+RLT+LL
Sbjct: 467 KFIDMNPISQMADNLKEGIVECGAMEKDLFLYTLLLYHPKHRTLVFTNSISAVRRLTKLL 526
Query: 1098 TMLKCSPLPLHASMNQRQRLKNLDRFRDQNN---SILLATDVAARGLDIPGIEHVIHYHV 1154
L+ L LH+SM Q+ RL++++RF ++ +IL+ATDVAARGLDI GI VIHYH
Sbjct: 527 QTLQLPALALHSSMAQKARLRSVERFSSPSSDPSTILVATDVAARGLDIKGINLVIHYHA 586
Query: 1155 PRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLE------KKVDLPDFPID 1208
PRT++ Y+HRSGRTARA G ++++ DE+ +++ + KK+ L +D
Sbjct: 587 PRTADTYVHRSGRTARAGASGKSVIICGPDEMVGVVRLAAKVHANMANGKKLPLESLELD 646
Query: 1209 ESVLSLIKKRIDLAKSIEYLE-SKIKKNRPDNWL 1241
V+S +K R+ LA I +K K + DNWL
Sbjct: 647 RRVVSRVKPRVSLASRITDANIAKEKISAEDNWL 680
Score = 256 bits (654), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 177/518 (34%), Positives = 259/518 (50%), Gaps = 101/518 (19%)
Query: 144 EDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKT 203
ED ++ W + I+ L + F +PT +Q +P +L D++G A TGSGKT
Sbjct: 194 EDDGADVSAWDSLGLSPEILTGLSKMKFASPTSVQEACIPQ-ILEGHDVIGKASTGSGKT 252
Query: 204 LAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYAL 263
LAFGIPIL + LE++ +++ E E++S + + AL
Sbjct: 253 LAFGIPIL----------------EHYLEKKRDDISAEKEKKSEKDSTPI--------AL 288
Query: 264 ILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPGRL 320
IL+PTRELA Q+ HI + P ++A + GG+S +KQ R+L+ I++ TPGR+
Sbjct: 289 ILSPTRELAHQLSKHIGELIAQAPGVNARIALLTGGLSVQKQQRLLSGA-DIVIGTPGRV 347
Query: 321 WEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESG 380
WE + G + ++ +I +LV+DE DR++ GHF E++ IL+ + +E G
Sbjct: 348 WEILSTGQGLIRKMQQIKFLVVDEADRLLSEGHFKEVEEILNAL----------DRVEDG 397
Query: 381 HFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRL 440
P +N ++ S RQT VFSAT L+ L KG+ V S+ L
Sbjct: 398 EVPGGENQA-SEEESDPSSERQTLVFSATFHRDLQQKL-AGKGKWTGGDVMDKKESMDYL 455
Query: 441 QDLLNIKS--PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQD 498
LN + PK +D+ + L E + C EKD +LY +L HP
Sbjct: 456 LQKLNFREEKPKFIDMNPISQMADNLKEGIVECGAMEKDLFLYTLLLYHP---------- 505
Query: 499 LLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVK 558
KH RTLVF NSIS+V+
Sbjct: 506 -----------------------------KH----------------RTLVFTNSISAVR 520
Query: 559 RLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQN---NSILLATDVAARGLDIPGIEH 615
RLT+LL L+ L LH+SM Q+ RL++++RF + ++IL+ATDVAARGLDI GI
Sbjct: 521 RLTKLLQTLQLPALALHSSMAQKARLRSVERFSSPSSDPSTILVATDVAARGLDIKGINL 580
Query: 616 VIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDEI 653
VIHYH PRT++ Y+HRSGRTARA G +V++ DE+
Sbjct: 581 VIHYHAPRTADTYVHRSGRTARAGASGKSVIICGPDEM 618
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLE------KKVDLPDFPIDESVL 1291
D ++HRSGRTARA G ++++ DE+ +++ + KK+ L +D V+
Sbjct: 591 DTYVHRSGRTARAGASGKSVIICGPDEMVGVVRLAAKVHANMANGKKLPLESLELDRRVV 650
Query: 1292 SLIKKRIDLAKSIEYLE-SKIKKNRPDNWLEKAAKDMDIIIDDENLIQPN 1340
S +K R+ LA I +K K + DNWL AA+D+ + D E + N
Sbjct: 651 SRVKPRVSLASRITDANIAKEKISAEDNWLRNAAEDLGVEYDSEEFDESN 700
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPG 1412
ALIL+PTRELA Q+ HI + P ++A + GG+S +KQ R+L+ I++ TPG
Sbjct: 287 ALILSPTRELAHQLSKHIGELIAQAPGVNARIALLTGGLSVQKQQRLLSGA-DIVIGTPG 345
>sp|A7TEG8|MAK5_VANPO ATP-dependent RNA helicase MAK5 OS=Vanderwaltozyma polyspora (strain
ATCC 22028 / DSM 70294) GN=MAK5 PE=3 SV=1
Length = 763
Score = 287 bits (735), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 183/519 (35%), Positives = 281/519 (54%), Gaps = 81/519 (15%)
Query: 767 MAEWVK--FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFG 824
+ EW + + T + L + GF PT IQ +P AL +DI+G A TGSGKTLA+G
Sbjct: 189 LPEWTEKVGELSFTTLHGLTKLGFNKPTLIQEEAIPMALKG-EDIMGKASTGSGKTLAYG 247
Query: 825 IPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAP 884
IPI +E+L + +NT LI P
Sbjct: 248 IPI----------------------------IEKLMKSKSNTAPI---------GLIFTP 270
Query: 885 TRELAIQVQNHILDAGKY----TPVKVACVVGGMSTEKQLRILN--KCPHILVATPGRLW 938
TRELA QV +H+ +P + + GG+S +KQ R+L I+VATPGR
Sbjct: 271 TRELAKQVTDHLRKIASLIVDKSPHAILSLTGGLSIQKQERLLKYEGSGRIVVATPGRFL 330
Query: 939 EFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPR--QTFVFS 996
E I+ + +I+ LV+DE DR+++ GHF E +NIL + ++ QT +FS
Sbjct: 331 ELIEKDKTLVERFSQISTLVLDEADRLLQDGHFDEFENILKYLGRESKNRKHNWQTMIFS 390
Query: 997 ATLTHSLKNSL---NLKKGQSKSKKVSKGDPSIKRLQDLLNIKS-PKIVDLTEKIGITKT 1052
AT L + L + K ++ SK ++ + +K L ++ KS P ++D + ++
Sbjct: 391 ATFATDLFDKLSHASWKNMKTPSKNENEMEIVLKHLMTKIHFKSKPILIDANPEDKVSSQ 450
Query: 1053 LTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMN 1112
+ ES I C E+D + YYF+ +PG+TL+FCN+I SVK+LT L L S +H+SM
Sbjct: 451 IKESLIECAATERDLFCYYFVSMYPGKTLIFCNAIDSVKKLTAYLNNLNISCFQIHSSMT 510
Query: 1113 QRQRLKNLDRFRDQNN--------SILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHR 1164
Q+ RL+NL+R++ Q+ ++L+ +DVAARGLDIPGI+HVIHYH+PRT+++YIHR
Sbjct: 511 QKNRLRNLERYQQQSEKNKILGKPTVLVGSDVAARGLDIPGIQHVIHYHLPRTADVYIHR 570
Query: 1165 SGRTARANNEGLTLVLIESDEI--PLYIKMFNSLEKKVD-------------LPDFPIDE 1209
SGRTARANNEG+++++ +E PL K+ +L K + PID+
Sbjct: 571 SGRTARANNEGVSVMICSPEEAMGPLR-KLRKTLANKSGKDIIMGKKKWQKTVTMLPIDD 629
Query: 1210 SVLSLIKKRIDLAKSI---EYLESKIKKNRPDNWLHRSG 1245
++LS +K+R LA + + S ++K+ D W+ ++
Sbjct: 630 TILSQLKERSRLASELADHDLASSSLQKD--DTWMKKAA 666
Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 169/522 (32%), Positives = 251/522 (48%), Gaps = 138/522 (26%)
Query: 150 MAEWVK--FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFG 207
+ EW + + T + L + GF PT IQ +P AL +DI+G A TGSGKTLA+G
Sbjct: 189 LPEWTEKVGELSFTTLHGLTKLGFNKPTLIQEEAIPMALKG-EDIMGKASTGSGKTLAYG 247
Query: 208 IPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAP 267
IPI+ E+L + +NT LI P
Sbjct: 248 IPII----------------------------EKLMKSKSNTAPI---------GLIFTP 270
Query: 268 TRELAIQVQNHILDAGKY----TPVKVACVVGGMSTEKQLRILN--KCPHILVATPGRLW 321
TRELA QV +H+ +P + + GG+S +KQ R+L I+VATPGR
Sbjct: 271 TRELAKQVTDHLRKIASLIVDKSPHAILSLTGGLSIQKQERLLKYEGSGRIVVATPGRFL 330
Query: 322 EFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGH 381
E I+ + +I+ LV+DE DR+++ GH
Sbjct: 331 ELIEKDKTLVERFSQISTLVLDEADRLLQDGH---------------------------- 362
Query: 382 FPELKNILDRVTMTETSQPR--QTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKR 439
F E +NIL + ++ QT +FSAT L + L+ +
Sbjct: 363 FDEFENILKYLGRESKNRKHNWQTMIFSATFATDLFDKLSHASWK--------------- 407
Query: 440 LQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDL 499
N+K+P +K E +I+ KH +
Sbjct: 408 -----NMKTP-----------SKNENEMEIVLKH----------------------LMTK 429
Query: 500 LNIKS-PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVK 558
++ KS P ++D + ++ + ES I C E+D + YYF+ +PG+TL+FCN+I SVK
Sbjct: 430 IHFKSKPILIDANPEDKVSSQIKESLIECAATERDLFCYYFVSMYPGKTLIFCNAIDSVK 489
Query: 559 RLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNN--------SILLATDVAARGLDI 610
+LT L L S +H+SM Q+ RL+NL+R++ Q+ ++L+ +DVAARGLDI
Sbjct: 490 KLTAYLNNLNISCFQIHSSMTQKNRLRNLERYQQQSEKNKILGKPTVLVGSDVAARGLDI 549
Query: 611 PGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDE 652
PGI+HVIHYH+PRT+++YIHRSGRTARANNEG++V++ +E
Sbjct: 550 PGIQHVIHYHLPRTADVYIHRSGRTARANNEGVSVMICSPEE 591
Score = 57.4 bits (137), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 69/119 (57%), Gaps = 21/119 (17%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEI--PLYIKMFNSLEKKVD-------------LP 1282
D ++HRSGRTARANNEG+++++ +E PL K+ +L K +
Sbjct: 565 DVYIHRSGRTARANNEGVSVMICSPEEAMGPLR-KLRKTLANKSGKDIIMGKKKWQKTVT 623
Query: 1283 DFPIDESVLSLIKKRIDLAKSI---EYLESKIKKNRPDNWLEKAAKDMDIIIDDENLIQ 1338
PID+++LS +K+R LA + + S ++K+ D W++KAA+D+ + ID ++ I+
Sbjct: 624 MLPIDDTILSQLKERSRLASELADHDLASSSLQKD--DTWMKKAAEDLGVDIDSDDEIK 680
Score = 43.9 bits (102), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKY----TPVKVACVVGGMSTEKQLRILN--KCPHILVA 1409
LI PTRELA QV +H+ +P + + GG+S +KQ R+L I+VA
Sbjct: 265 GLIFTPTRELAKQVTDHLRKIASLIVDKSPHAILSLTGGLSIQKQERLLKYEGSGRIVVA 324
Query: 1410 TPG 1412
TPG
Sbjct: 325 TPG 327
>sp|Q5BCI0|MAK5_EMENI ATP-dependent RNA helicase mak5 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=mak5
PE=3 SV=1
Length = 770
Score = 285 bits (728), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 185/513 (36%), Positives = 273/513 (53%), Gaps = 67/513 (13%)
Query: 767 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 826
++ W + + +L + F TPT +Q +P +L D++G A TGSGKTLAFG+P
Sbjct: 196 ISAWEPLGLSPETLTSLSKLKFSTPTSVQKSCIP-PILDGHDVIGKASTGSGKTLAFGLP 254
Query: 827 ILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTR 886
IL + + T + EEE E++ ALIL+PTR
Sbjct: 255 ILEHYLERERRKTIDS------EEEKEKI---------------------PIALILSPTR 287
Query: 887 ELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQL 943
ELA Q+Q HI P + A + GG+S +KQ R+L + I++ TPGR+WE ++
Sbjct: 288 ELAHQLQKHIYGLISNAPGVNARTALLTGGLSVQKQQRLL-ETADIVIGTPGRVWEVLRT 346
Query: 944 GHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQP-------------- 989
G + + I +LVIDE DR++ GHF E+++IL + E P
Sbjct: 347 GQGLIRRMQGIKFLVIDEADRLLSEGHFKEVEDILSSLDRVEDGGPPDEEDDSSEENVVP 406
Query: 990 ---RQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKS--PKIVDLT 1044
RQT VFSAT L+ L KG+ + S++ L LN + PK +D+
Sbjct: 407 GVERQTLVFSATFHRDLQQKL-AGKGKWTGGDIMNKKESMEYLLQKLNFREEKPKFIDVN 465
Query: 1045 EKIGITKTLTESKILCKHDEKDSYLYYFILQHP-GRTLVFCNSISSVKRLTQLLTMLKCS 1103
+ + L E + C EKD YLY +L HP RTLVF NSIS+V+R+TQLL L+
Sbjct: 466 PVSQMAEGLKEGIVECPAMEKDLYLYTLLLYHPKHRTLVFTNSISAVRRITQLLQTLQLP 525
Query: 1104 PLPLHASMNQRQRLKNLDRFRDQN---NSILLATDVAARGLDIPGIEHVIHYHVPRTSEI 1160
L LH+SM Q+ RL++++RF +IL+ATDVAARGLDI GI+ VIHYH PRT++
Sbjct: 526 ALALHSSMAQKARLRSVERFSSSTANPGTILVATDVAARGLDIKGIDFVIHYHAPRTADT 585
Query: 1161 YIHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLE------KKVDLPDFPIDESVLSL 1214
Y+HRSGRTARA G ++++ +E+ +++ + KK+ L +D ++S
Sbjct: 586 YVHRSGRTARAGASGKSVIICSPEEMVGVVRLAAKVHANMANGKKLPLESLELDRRIVSR 645
Query: 1215 IKKRIDLAKSIEYLESKIKKNR---PDNWLHRS 1244
+++R+ LA I +S I K + DNWL +
Sbjct: 646 VRQRVVLAARI--TDSNIAKEKITTEDNWLRNA 676
Score = 252 bits (644), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 175/512 (34%), Positives = 251/512 (49%), Gaps = 104/512 (20%)
Query: 150 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 209
++ W + + +L + F TPT +Q +P +L D++G A TGSGKTLAFG+P
Sbjct: 196 ISAWEPLGLSPETLTSLSKLKFSTPTSVQKSCIP-PILDGHDVIGKASTGSGKTLAFGLP 254
Query: 210 ILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTR 269
IL + + T + EEE E++ ALIL+PTR
Sbjct: 255 ILEHYLERERRKTIDS------EEEKEKI---------------------PIALILSPTR 287
Query: 270 ELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQL 326
ELA Q+Q HI P + A + GG+S +KQ R+L + I++ TPGR+WE ++
Sbjct: 288 ELAHQLQKHIYGLISNAPGVNARTALLTGGLSVQKQQRLL-ETADIVIGTPGRVWEVLRT 346
Query: 327 GHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELK 386
G + + I +LVIDE DR++ GHF E+++IL + E P +S +
Sbjct: 347 GQGLIRRMQGIKFLVIDEADRLLSEGHFKEVEDILSSLDRVEDGGPPDEEDDSSE----E 402
Query: 387 NILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNI 446
N++ V RQT VFSAT L+ L KG+ + S++ L LN
Sbjct: 403 NVVPGVE-------RQTLVFSATFHRDLQQKL-AGKGKWTGGDIMNKKESMEYLLQKLNF 454
Query: 447 KS--PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDLLNIKS 504
+ PK +D+ + + L E + C EKD YLY +L HP
Sbjct: 455 REEKPKFIDVNPVSQMAEGLKEGIVECPAMEKDLYLYTLLLYHP---------------- 498
Query: 505 PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLL 564
KH RTLVF NSIS+V+R+TQLL
Sbjct: 499 -----------------------KH----------------RTLVFTNSISAVRRITQLL 519
Query: 565 TMLKCSPLPLHASMNQRQRLKNLDRFRDQN---NSILLATDVAARGLDIPGIEHVIHYHV 621
L+ L LH+SM Q+ RL++++RF +IL+ATDVAARGLDI GI+ VIHYH
Sbjct: 520 QTLQLPALALHSSMAQKARLRSVERFSSSTANPGTILVATDVAARGLDIKGIDFVIHYHA 579
Query: 622 PRTSEIYIHRSGRTARANNEGLTVVLIESDEI 653
PRT++ Y+HRSGRTARA G +V++ +E+
Sbjct: 580 PRTADTYVHRSGRTARAGASGKSVIICSPEEM 611
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 64/125 (51%), Gaps = 11/125 (8%)
Query: 1223 KSIEYLESKIKKNRPDNWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLE------ 1276
K I+++ D ++HRSGRTARA G ++++ +E+ +++ +
Sbjct: 569 KGIDFVIHYHAPRTADTYVHRSGRTARAGASGKSVIICSPEEMVGVVRLAAKVHANMANG 628
Query: 1277 KKVDLPDFPIDESVLSLIKKRIDLAKSIEYLESKIKKNR---PDNWLEKAAKDMDIIIDD 1333
KK+ L +D ++S +++R+ LA I +S I K + DNWL AA+D+ + D
Sbjct: 629 KKLPLESLELDRRIVSRVRQRVVLAARI--TDSNIAKEKITTEDNWLRNAAEDLGVEYDS 686
Query: 1334 ENLIQ 1338
+ Q
Sbjct: 687 DEFDQ 691
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPG 1412
ALIL+PTRELA Q+Q HI P + A + GG+S +KQ R+L + I++ TPG
Sbjct: 280 ALILSPTRELAHQLQKHIYGLISNAPGVNARTALLTGGLSVQKQQRLL-ETADIVIGTPG 338
>sp|Q0U6X2|MAK5_PHANO ATP-dependent RNA helicase MAK5 OS=Phaeosphaeria nodorum (strain SN15
/ ATCC MYA-4574 / FGSC 10173) GN=MAK5 PE=3 SV=1
Length = 817
Score = 284 bits (727), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 176/504 (34%), Positives = 265/504 (52%), Gaps = 63/504 (12%)
Query: 770 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 829
W + + I+ +L + F PT IQ+ +P ++A +D++G A TGSGKTLAFGIPI
Sbjct: 251 WEELELSTKILESLAKLKFSKPTTIQASTIPE-IMAGRDVIGKASTGSGKTLAFGIPI-- 307
Query: 830 GIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELA 889
+E A+ ++ ALI+APTRELA
Sbjct: 308 -----------------------------IESYLASKSKSKDVKDKTPLALIIAPTRELA 338
Query: 890 IQVQNH---ILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHF 946
Q+ H + G + +A V GG++ +KQ R L K I+V TPGRLWE I GH
Sbjct: 339 HQITAHLTALCAKGAFEAPLIASVTGGLAVQKQRRQLEKA-DIIVGTPGRLWEVISTGHG 397
Query: 947 HLTELYKINYLVIDETDRMIESGHFPELKNIL-----------DRVTMTETSQPRQTFVF 995
L ++ +I +LV+DE DR++ G++ EL IL + T RQT VF
Sbjct: 398 LLEKVKQIRFLVVDEADRLLSQGNYKELGEILKILEKDAPAEGEAEAEETTEVERQTLVF 457
Query: 996 SATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKS--PKIVDLTEKIGITKTL 1053
SAT L+ L K +SK S++ L +N + PK +D + L
Sbjct: 458 SATFQKGLQQKLAGKAKGGSDNLMSK-QQSMEYLLKKINFREEKPKFIDANPSSQMASKL 516
Query: 1054 TESKILCKHDEKDSYLYYFILQHP-GRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMN 1112
E I C EKD YLY ++ +P R L+F NSIS+V+RLT L L LPLH+SM
Sbjct: 517 KEGLIECAGTEKDLYLYSLLMFYPKKRALIFTNSISAVRRLTPFLQNLALPALPLHSSMA 576
Query: 1113 QRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARAN 1172
Q+ RL++++RF+++ SIL+ATDVAARGLDIP +E VIHYH+PR ++ Y+HRSGRTARA
Sbjct: 577 QKARLRSIERFKERPGSILVATDVAARGLDIPKVELVIHYHLPRAADTYVHRSGRTARAE 636
Query: 1173 NEGLTLVLIESDEIPLYIKMFNSLEKKVD-----------LPDFPIDESVLSLIKKRIDL 1221
G ++++ +E+ ++ + + D + ID +++ +K R +
Sbjct: 637 ASGSSILICAPEEVGGVRRLIAKVHARADEAPKSKKTAYFIRTLDIDRRIVARLKPRASI 696
Query: 1222 AKSI-EYLESKIKKNRPDNWLHRS 1244
+K + + + +K KK+ D+ L ++
Sbjct: 697 SKKLADTVIAKEKKHSEDDTLRQA 720
Score = 227 bits (579), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 186/625 (29%), Positives = 284/625 (45%), Gaps = 143/625 (22%)
Query: 44 QEAENNEEEVEEAEADKEKTEGINVTVSSKK---------KKL-KRKQNPSQVEVSELSA 93
Q + E+V+ E D T NV +S+ K KK+ KR++ + ++ L+
Sbjct: 154 QNGDEQSEDVQMVEEDAPPTP--NVVLSTTKADGDGEAEPKKMNKRERAAEKKRIAALAK 211
Query: 94 NTNDPDDQVNKTEEIQSDEPSSKKLKQKKKKKQTYTSANKELLEVDTSNNEDMFVQMAEW 153
T PDD DE S K T+ ++L + +++ED V ++ W
Sbjct: 212 KTKKPDD----------DEASEGK---------TFGPGAFDIL-ANRADDEDDEVDVSAW 251
Query: 154 VKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTG 213
+ + I+ +L + F PT IQ+ +P ++A +D++G A TGSGKTLAFGIPI
Sbjct: 252 EELELSTKILESLAKLKFSKPTTIQASTIPE-IMAGRDVIGKASTGSGKTLAFGIPI--- 307
Query: 214 IVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAI 273
+E A+ ++ ALI+APTRELA
Sbjct: 308 ----------------------------IESYLASKSKSKDVKDKTPLALIIAPTRELAH 339
Query: 274 QVQNH---ILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFH 330
Q+ H + G + +A V GG++ +KQ R L K I+V TPGRLWE I GH
Sbjct: 340 QITAHLTALCAKGAFEAPLIASVTGGLAVQKQRRQLEKA-DIIVGTPGRLWEVISTGHGL 398
Query: 331 LTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNILD 390
L ++ +I +LV+DE DR++ G++ EL IL ++E + +
Sbjct: 399 LEKVKQIRFLVVDEADRLLSQGNYKELGEIL-------------KILEK----DAPAEGE 441
Query: 391 RVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKS-- 448
T RQT VFSAT L+ L K +SK S++ L +N +
Sbjct: 442 AEAEETTEVERQTLVFSATFQKGLQQKLAGKAKGGSDNLMSK-QQSMEYLLKKINFREEK 500
Query: 449 PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDLLNIKSPKIV 508
PK +D + L E I C EKD YLY ++ +P + + +
Sbjct: 501 PKFIDANPSSQMASKLKEGLIECAGTEKDLYLYSLLMFYPKK---------------RAL 545
Query: 509 DLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLK 568
T I + LT F +++ L
Sbjct: 546 IFTNSISAVRRLTP---------------------------FLQNLA-----------LP 567
Query: 569 CSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIY 628
PL H+SM Q+ RL++++RF+++ SIL+ATDVAARGLDIP +E VIHYH+PR ++ Y
Sbjct: 568 ALPL--HSSMAQKARLRSIERFKERPGSILVATDVAARGLDIPKVELVIHYHLPRAADTY 625
Query: 629 IHRSGRTARANNEGLTVVLIESDEI 653
+HRSGRTARA G ++++ +E+
Sbjct: 626 VHRSGRTARAEASGSSILICAPEEV 650
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 37/62 (59%), Gaps = 4/62 (6%)
Query: 1356 ALILAPTRELAIQVQNH---ILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPG 1412
ALI+APTRELA Q+ H + G + +A V GG++ +KQ R L K I+V TPG
Sbjct: 328 ALIIAPTRELAHQITAHLTALCAKGAFEAPLIASVTGGLAVQKQRRQLEKA-DIIVGTPG 386
Query: 1413 AL 1414
L
Sbjct: 387 RL 388
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 57/111 (51%), Gaps = 12/111 (10%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVD-----------LPDFPI 1286
D ++HRSGRTARA G ++++ +E+ ++ + + D + I
Sbjct: 623 DTYVHRSGRTARAEASGSSILICAPEEVGGVRRLIAKVHARADEAPKSKKTAYFIRTLDI 682
Query: 1287 DESVLSLIKKRIDLAKSI-EYLESKIKKNRPDNWLEKAAKDMDIIIDDENL 1336
D +++ +K R ++K + + + +K KK+ D+ L +AA+D+ + D E
Sbjct: 683 DRRIVARLKPRASISKKLADTVIAKEKKHSEDDTLRQAAEDLGVDYDSEEF 733
>sp|Q6CTN7|MAK5_KLULA ATP-dependent RNA helicase MAK5 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=MAK5 PE=3 SV=1
Length = 796
Score = 281 bits (718), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 193/555 (34%), Positives = 294/555 (52%), Gaps = 97/555 (17%)
Query: 744 TYTSANKELLEVDT-SNNEDMFVQ----MAEWVK-FNIPETIIRALYQKGFKTPTKIQSM 797
T N +LL+ + S+N D+ Q + EW + ++ T+++ L GF PT+IQ
Sbjct: 189 TEDQTNDDLLQSNVFSSNVDIDDQEPPVLPEWSENMDLSFTVLKGLSGLGFTRPTEIQLK 248
Query: 798 VMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLE 857
+P AL +I+G A TGSGKTLA+GIPI +E
Sbjct: 249 SIPLALKGH-NIMGKASTGSGKTLAYGIPI----------------------------IE 279
Query: 858 ELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQNHILDA-------GKYTPVKVACV 910
+L ++++N ++ LI PTRELA QV +H+ KYT + +
Sbjct: 280 QLIKDTSN---------DRSIGLIFTPTRELAHQVTDHLQKVWTKMNKLNKYT---ILSL 327
Query: 911 VGGMSTEKQLRIL--NKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIES 968
GG+S +KQ RIL + I+VATPGR E ++ + KI+ LV+DE DR+++
Sbjct: 328 TGGLSIQKQERILKYDGSGRIIVATPGRFLELLERNPDLIPRFAKIDTLVLDEADRLLQD 387
Query: 969 GHFPELKNILD----------RVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKK 1018
GHF E + IL + T QT +FSAT + L L+ K K K
Sbjct: 388 GHFDEFEKILKLLGKARKIKTSIDGKPTGSGWQTMIFSATFSLDLFTKLD--KTSWKILK 445
Query: 1019 VSKGDPS-----IKRLQDLLNIKS-PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYF 1072
+ G+ + + L + KS P I+D + +T + ES I C E+D Y+YYF
Sbjct: 446 TAGGENNEMEQVLNHLMKKIQFKSKPVIIDTNPEHKVTSQVKESLIECLPMERDLYVYYF 505
Query: 1073 ILQHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNN---- 1128
I+ +PG TLVFCN+I SVK+L L LK S +H+SM Q+ RL+NL++F++Q+
Sbjct: 506 IMMYPGTTLVFCNAIDSVKKLNAFLNNLKISSFQIHSSMAQKNRLRNLEKFKEQSEKNSK 565
Query: 1129 ----SILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESD 1184
+IL+A+DVAARGLDI GI+HV+HYH+PR++++YIHRSGRTAR +NEG+++++
Sbjct: 566 VGKPTILIASDVAARGLDISGIKHVLHYHLPRSADVYIHRSGRTARGDNEGVSVMICSPQ 625
Query: 1185 EI--PLYIKMFNSLEKKV-----------DLPDFPIDESVLSLIKKRIDLAKSIEYLESK 1231
E PL K+ L K D+P P++ ++S +++R +A + E
Sbjct: 626 ESMGPLR-KLRKVLSTKKSSNPRKTKWQNDVPMLPLEPDIVSQLRERSKIASELADDEIA 684
Query: 1232 IKK-NRPDNWLHRSG 1245
K ++ DNWL ++
Sbjct: 685 TKSLHKDDNWLKKAA 699
Score = 243 bits (619), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 182/560 (32%), Positives = 268/560 (47%), Gaps = 156/560 (27%)
Query: 127 TYTSANKELLEVDT-SNNEDMFVQ----MAEWVK-FNIPETIIRALYQKGFKTPTKIQSM 180
T N +LL+ + S+N D+ Q + EW + ++ T+++ L GF PT+IQ
Sbjct: 189 TEDQTNDDLLQSNVFSSNVDIDDQEPPVLPEWSENMDLSFTVLKGLSGLGFTRPTEIQLK 248
Query: 181 VMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLE 240
+P AL +I+G A TGSGKTLA+GIPI+ E
Sbjct: 249 SIPLALKGH-NIMGKASTGSGKTLAYGIPII----------------------------E 279
Query: 241 ELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQNHILDA-------GKYTPVKVACV 293
+L ++++N ++ LI PTRELA QV +H+ KYT + +
Sbjct: 280 QLIKDTSN---------DRSIGLIFTPTRELAHQVTDHLQKVWTKMNKLNKYT---ILSL 327
Query: 294 VGGMSTEKQLRIL--NKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIES 351
GG+S +KQ RIL + I+VATPGR E ++ + KI+ LV+DE DR+++
Sbjct: 328 TGGLSIQKQERILKYDGSGRIIVATPGRFLELLERNPDLIPRFAKIDTLVLDEADRLLQD 387
Query: 352 GHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNILD----------RVTMTETSQPR 401
GHF E + IL + T
Sbjct: 388 ----------------------------GHFDEFEKILKLLGKARKIKTSIDGKPTGSGW 419
Query: 402 QTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGIT 461
QT +FSA T SL L K K K + G+ + ++ +LN
Sbjct: 420 QTMIFSA--TFSLDLFTKLDKTSWKILKTAGGENN--EMEQVLN---------------- 459
Query: 462 KTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDLLNIKS-PKIVDLTEKIGITKTL 520
L ++IQ KS P I+D + +T +
Sbjct: 460 -----------------------------HLMKKIQ----FKSKPVIIDTNPEHKVTSQV 486
Query: 521 TESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQ 580
ES I C E+D Y+YYFI+ +PG TLVFCN+I SVK+L L LK S +H+SM Q
Sbjct: 487 KESLIECLPMERDLYVYYFIMMYPGTTLVFCNAIDSVKKLNAFLNNLKISSFQIHSSMAQ 546
Query: 581 RQRLKNLDRFRDQNN--------SILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRS 632
+ RL+NL++F++Q+ +IL+A+DVAARGLDI GI+HV+HYH+PR++++YIHRS
Sbjct: 547 KNRLRNLEKFKEQSEKNSKVGKPTILIASDVAARGLDISGIKHVLHYHLPRSADVYIHRS 606
Query: 633 GRTARANNEGLTVVLIESDE 652
GRTAR +NEG++V++ E
Sbjct: 607 GRTARGDNEGVSVMICSPQE 626
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 79/153 (51%), Gaps = 27/153 (17%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEI--PLYIKMFNSLEKKV-----------DLPDF 1284
D ++HRSGRTAR +NEG+++++ E PL K+ L K D+P
Sbjct: 600 DVYIHRSGRTARGDNEGVSVMICSPQESMGPLR-KLRKVLSTKKSSNPRKTKWQNDVPML 658
Query: 1285 PIDESVLSLIKKRIDLAKSIEYLESKIKK-NRPDNWLEKAAKDMDIIIDDE-----NLIQ 1338
P++ ++S +++R +A + E K ++ DNWL+KAA+++DI +D E +
Sbjct: 659 PLEPDIVSQLRERSKIASELADDEIATKSLHKDDNWLKKAAEELDIELDSEEEEKDQFLA 718
Query: 1339 PN-------QLLIFESRNLRYSWDALILAPTRE 1364
N QL E++ L+Y + L+ P R+
Sbjct: 719 RNKTKKLNKQLEKNENKALKYQLNELLKMPLRK 751
Score = 45.4 bits (106), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 36/66 (54%), Gaps = 12/66 (18%)
Query: 1356 ALILAPTRELAIQVQNHILDA-------GKYTPVKVACVVGGMSTEKQLRIL--NKCPHI 1406
LI PTRELA QV +H+ KYT + + GG+S +KQ RIL + I
Sbjct: 292 GLIFTPTRELAHQVTDHLQKVWTKMNKLNKYT---ILSLTGGLSIQKQERILKYDGSGRI 348
Query: 1407 LVATPG 1412
+VATPG
Sbjct: 349 IVATPG 354
>sp|A1CTL8|MAK5_ASPCL ATP-dependent RNA helicase mak5 OS=Aspergillus clavatus (strain ATCC
1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1) GN=mak5
PE=3 SV=1
Length = 774
Score = 280 bits (716), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 187/516 (36%), Positives = 272/516 (52%), Gaps = 64/516 (12%)
Query: 761 EDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKT 820
ED V ++ W N+ ++ + + F +PT +Q+ +P +L D+VG A TGSGKT
Sbjct: 191 EDDGVDVSAWDALNLSTELLTGISKMKFTSPTAVQAACIPH-ILDGHDVVGKASTGSGKT 249
Query: 821 LAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYAL 880
LAFGIPIL E LE+ + + K + AL
Sbjct: 250 LAFGIPIL------------------------EHYLEKNRDGHGDIIGKKDKKDSTPIAL 285
Query: 881 ILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPGRL 937
IL+PTRELA Q+ HI + P ++A + GG+S +KQ R+L I++ TPGR+
Sbjct: 286 ILSPTRELAHQLAKHIGELVTQAPGVNARIALLTGGLSVQKQQRLLAGA-DIVIGTPGRV 344
Query: 938 WEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNI---LDRVTMTET-------- 986
WE + G + ++ KI +LV+DE DR++ GHF E++ I LDRV +
Sbjct: 345 WEIMSTGQGLIRKMQKIKFLVVDEADRLLSEGHFKEVEEIIGALDRVEDGDVLDEEDEAP 404
Query: 987 ------SQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKS--P 1038
RQT VFSAT L+ L KG+ + S+ L LN + P
Sbjct: 405 EEESDPRSERQTLVFSATFHRDLQQKL-AGKGKWTGGDIMNKKESMDYLLQKLNFREEKP 463
Query: 1039 KIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHP-GRTLVFCNSISSVKRLTQLL 1097
K +D + + L E + C EKD +LY +L HP RTLVF NSIS+V+RL QLL
Sbjct: 464 KFIDTNPVSQMAENLKEGIVECGAMEKDLFLYTLLLYHPKHRTLVFTNSISAVRRLAQLL 523
Query: 1098 TMLKCSPLPLHASMNQRQRLKNLDRFRDQN---NSILLATDVAARGLDIPGIEHVIHYHV 1154
L+ L LH+SM Q+ RL++++RF +IL+ATDVAARGLDI GI+ VIHYH
Sbjct: 524 QALQLPALALHSSMAQKARLRSVERFSSPTANPGTILIATDVAARGLDIKGIDLVIHYHA 583
Query: 1155 PRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLE------KKVDLPDFPID 1208
PRT++ Y+HRSGRTARA G ++++ DE+ +++ + K++ L +D
Sbjct: 584 PRTADTYVHRSGRTARAGASGKSVIICGPDEMVGVVRLAAKVHANMANGKRLPLESLELD 643
Query: 1209 ESVLSLIKKRIDLAKSIEYLESKIKKNR---PDNWL 1241
V+ +K R+ LA I +++ I K + DNWL
Sbjct: 644 RRVVGRVKPRVSLASRI--VDANIAKEKISSEDNWL 677
Score = 246 bits (627), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 177/521 (33%), Positives = 247/521 (47%), Gaps = 107/521 (20%)
Query: 144 EDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKT 203
ED V ++ W N+ ++ + + F +PT +Q+ +P +L D+VG A TGSGKT
Sbjct: 191 EDDGVDVSAWDALNLSTELLTGISKMKFTSPTAVQAACIPH-ILDGHDVVGKASTGSGKT 249
Query: 204 LAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYAL 263
LAFGIPIL E LE+ + + K + AL
Sbjct: 250 LAFGIPIL------------------------EHYLEKNRDGHGDIIGKKDKKDSTPIAL 285
Query: 264 ILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPGRL 320
IL+PTRELA Q+ HI + P ++A + GG+S +KQ R+L I++ TPGR+
Sbjct: 286 ILSPTRELAHQLAKHIGELVTQAPGVNARIALLTGGLSVQKQQRLLAGA-DIVIGTPGRV 344
Query: 321 WEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNI---LDRVTMTETSQPRQTMI 377
WE + G + ++ KI +LV+DE DR++ GHF E++ I LDRV +
Sbjct: 345 WEIMSTGQGLIRKMQKIKFLVVDEADRLLSEGHFKEVEEIIGALDRVEDGDVLDEEDEAP 404
Query: 378 ESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSI 437
E P RQT VFSAT L+ L KG+ + S+
Sbjct: 405 EEESDPR--------------SERQTLVFSATFHRDLQQKL-AGKGKWTGGDIMNKKESM 449
Query: 438 KRLQDLLNIKS--PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEE 495
L LN + PK +D + + L E + C EKD +LY +L HP
Sbjct: 450 DYLLQKLNFREEKPKFIDTNPVSQMAENLKEGIVECGAMEKDLFLYTLLLYHP------- 502
Query: 496 IQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSIS 555
KH RTLVF NSIS
Sbjct: 503 --------------------------------KH----------------RTLVFTNSIS 514
Query: 556 SVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQN---NSILLATDVAARGLDIPG 612
+V+RL QLL L+ L LH+SM Q+ RL++++RF +IL+ATDVAARGLDI G
Sbjct: 515 AVRRLAQLLQALQLPALALHSSMAQKARLRSVERFSSPTANPGTILIATDVAARGLDIKG 574
Query: 613 IEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDEI 653
I+ VIHYH PRT++ Y+HRSGRTARA G +V++ DE+
Sbjct: 575 IDLVIHYHAPRTADTYVHRSGRTARAGASGKSVIICGPDEM 615
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 57/108 (52%), Gaps = 11/108 (10%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLE------KKVDLPDFPIDESVL 1291
D ++HRSGRTARA G ++++ DE+ +++ + K++ L +D V+
Sbjct: 588 DTYVHRSGRTARAGASGKSVIICGPDEMVGVVRLAAKVHANMANGKRLPLESLELDRRVV 647
Query: 1292 SLIKKRIDLAKSIEYLESKIKKNR---PDNWLEKAAKDMDIIIDDENL 1336
+K R+ LA I +++ I K + DNWL AA+D+ + D E
Sbjct: 648 GRVKPRVSLASRI--VDANIAKEKISSEDNWLRNAAEDLGVEYDSEEF 693
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPG 1412
ALIL+PTRELA Q+ HI + P ++A + GG+S +KQ R+L I++ TPG
Sbjct: 284 ALILSPTRELAHQLAKHIGELVTQAPGVNARIALLTGGLSVQKQQRLLAGA-DIVIGTPG 342
>sp|Q1E7Y4|MAK5_COCIM ATP-dependent RNA helicase MAK5 OS=Coccidioides immitis (strain RS)
GN=MAK5 PE=3 SV=1
Length = 783
Score = 280 bits (715), Expect = 9e-74, Method: Compositional matrix adjust.
Identities = 194/526 (36%), Positives = 284/526 (53%), Gaps = 79/526 (15%)
Query: 765 VQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFG 824
V ++ W ++ + +L + F +PT IQS +P A+L D++G A TGSGKTLAFG
Sbjct: 187 VDVSAWDSLDLSAELQTSLGRLKFSSPTPIQSACIP-AVLQGHDVIGKASTGSGKTLAFG 245
Query: 825 IPILTGIVNKLEN---PTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALI 881
IPI+ + K PT +E +S E ALI
Sbjct: 246 IPIVEYFLGKYRGGRAPTASEERESTKEP---------------------------MALI 278
Query: 882 LAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPGRLW 938
L+PTRELA Q+ H+ D + P V++A V GG+S KQ R+L I++ATPGRLW
Sbjct: 279 LSPTRELAHQLNKHLTDLVNHAPNTQVRIATVTGGLSIYKQQRLLADA-DIIIATPGRLW 337
Query: 939 EFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNIL---DRVTMTE---------- 985
E + L++L KI +LVIDE DR++ GHF E++ IL D+V +TE
Sbjct: 338 EVVGSMTGFLSKLKKIRFLVIDEADRLLSEGHFKEVEEILNAIDKVEITEEAYGERSERE 397
Query: 986 ---------TSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIK 1036
++PRQT VFSAT L+ L+ K + K + S++ L LN +
Sbjct: 398 PEPEPDEEKKAEPRQTLVFSATFHKGLQQKLSGKIRYRNDDLLDKKE-SMEYLLRKLNFR 456
Query: 1037 S--PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHP-GRTLVFCNSISSVKRL 1093
PK +D+ + + L E + C +KD LY +L HP RTLVF NSIS+V+RL
Sbjct: 457 EERPKFIDVNPISQMAQNLKEGLVQCAPMDKDLLLYTLLLYHPKHRTLVFTNSISAVRRL 516
Query: 1094 TQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNS---ILLATDVAARGLDIPGIEHVI 1150
TQLL L LH+SM Q+ RL++++RF ++ IL+ATDVAARGLDI GI+ ++
Sbjct: 517 TQLLQNLNLPTFALHSSMAQKARLRSVERFSSLSSDPSSILVATDVAARGLDIKGIDLIV 576
Query: 1151 HYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMF--------------NSL 1196
HYH+PRT++ Y+HRSGRTARA+ G ++++ +E ++ + +
Sbjct: 577 HYHIPRTADTYVHRSGRTARASASGKSILICAPEETTGVARLVAKIHSNKKDSSATESKM 636
Query: 1197 EKKVDLPDFPIDESVLSLIKKRIDLAKSI-EYLESKIKKNRPDNWL 1241
EKKV L +D ++ ++ R+ LAK I E + +K K + D+WL
Sbjct: 637 EKKVPLQSVDLDRRIIDRLRPRVTLAKKITESILAKEKLSSEDDWL 682
Score = 248 bits (633), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 213/673 (31%), Positives = 320/673 (47%), Gaps = 123/673 (18%)
Query: 19 GGVKKKRKKKKPLKTKVKSKTKPNLQEAENNEEEVEEAEADKEKTEGINVTVSSKKKKLK 78
GG K + K +K +K+ T + Q AE+ EE + D E +G + K
Sbjct: 77 GGEIKFKASKSKIKGILKNSTDKSGQPAEDWEEWSGFGD-DSEDGDGTTLEAE------K 129
Query: 79 RKQNPSQVEVSELSANTNDPDDQVNKTEEIQSDEPSSKKLKQKKKKKQTYTSANKELLEV 138
+ +N +V N ++ + + NK + D K K ++ + E+
Sbjct: 130 KAENHGKVNDRRTKTNNSNKEKESNK---LPKDRGPRIKTDNGIKTGVSFAALQDEV--- 183
Query: 139 DTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAET 198
ED V ++ W ++ + +L + F +PT IQS +P A+L D++G A T
Sbjct: 184 ----EED--VDVSAWDSLDLSAELQTSLGRLKFSSPTPIQSACIP-AVLQGHDVIGKAST 236
Query: 199 GSGKTLAFGIPILTGIVNKLEN---PTEEDENDSGLEEEAEEVLEELEEESANTTEFVKK 255
GSGKTLAFGIPI+ + K PT +E +S E
Sbjct: 237 GSGKTLAFGIPIVEYFLGKYRGGRAPTASEERESTKEP---------------------- 274
Query: 256 TRNKLYALILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHI 312
ALIL+PTRELA Q+ H+ D + P V++A V GG+S KQ R+L I
Sbjct: 275 -----MALILSPTRELAHQLNKHLTDLVNHAPNTQVRIATVTGGLSIYKQQRLLADA-DI 328
Query: 313 LVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQP 372
++ATPGRLWE + L++L KI +LVIDE DR++ GHF E++ IL+ + E ++
Sbjct: 329 IIATPGRLWEVVGSMTGFLSKLKKIRFLVIDEADRLLSEGHFKEVEEILNAIDKVEITE- 387
Query: 373 RQTMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSK 432
E+ + + ++PRQT VFSAT L+ Q S K+
Sbjct: 388 -----EAYGERSEREPEPEPDEEKKAEPRQTLVFSATFHKGLQ--------QKLSGKIRY 434
Query: 433 GDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTL 492
R DLL D+K+S Y +L+
Sbjct: 435 ------RNDDLL-----------------------------DKKESMEY--LLRK----- 452
Query: 493 CEEIQDLLNIKS--PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHP-GRTLV 549
LN + PK +D+ + + L E + C +KD LY +L HP RTLV
Sbjct: 453 -------LNFREERPKFIDVNPISQMAQNLKEGLVQCAPMDKDLLLYTLLLYHPKHRTLV 505
Query: 550 FCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNS---ILLATDVAAR 606
F NSIS+V+RLTQLL L LH+SM Q+ RL++++RF ++ IL+ATDVAAR
Sbjct: 506 FTNSISAVRRLTQLLQNLNLPTFALHSSMAQKARLRSVERFSSLSSDPSSILVATDVAAR 565
Query: 607 GLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDEIPLKTKFNLQEEEN 666
GLDI GI+ ++HYH+PRT++ Y+HRSGRTARA+ G ++++ +E + + N
Sbjct: 566 GLDIKGIDLIVHYHIPRTADTYVHRSGRTARASASGKSILICAPEETTGVARLVAKIHSN 625
Query: 667 NEEEERAEADKEK 679
++ E+ EK
Sbjct: 626 KKDSSATESKMEK 638
Score = 57.4 bits (137), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 8/84 (9%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPG 1412
ALIL+PTRELA Q+ H+ D + P V++A V GG+S KQ R+L I++ATPG
Sbjct: 276 ALILSPTRELAHQLNKHLTDLVNHAPNTQVRIATVTGGLSIYKQQRLLADA-DIIIATPG 334
Query: 1413 ALSLKRIDLAKSIEYLESKIKKNR 1436
L ++ S+ SK+KK R
Sbjct: 335 RL----WEVVGSMTGFLSKLKKIR 354
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 60/116 (51%), Gaps = 15/116 (12%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEIPLYIKMF--------------NSLEKKVDLPD 1283
D ++HRSGRTARA+ G ++++ +E ++ + +EKKV L
Sbjct: 585 DTYVHRSGRTARASASGKSILICAPEETTGVARLVAKIHSNKKDSSATESKMEKKVPLQS 644
Query: 1284 FPIDESVLSLIKKRIDLAKSI-EYLESKIKKNRPDNWLEKAAKDMDIIIDDENLIQ 1338
+D ++ ++ R+ LAK I E + +K K + D+WL AA+D+ + D + +
Sbjct: 645 VDLDRRIIDRLRPRVTLAKKITESILAKEKLSSEDDWLRSAAEDLGVDYDSDEFAE 700
>sp|Q6BV58|MAK5_DEBHA ATP-dependent RNA helicase MAK5 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=MAK5 PE=3 SV=1
Length = 790
Score = 279 bits (713), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 187/526 (35%), Positives = 279/526 (53%), Gaps = 68/526 (12%)
Query: 755 VDTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAE 814
VD + +D V + W ++ + L ++ PT IQ +P A+ KD++G A
Sbjct: 186 VDLTLPDDNEVNLPYWDDLSLSSFTLNGLSALEYEKPTAIQKRTIPLAIEG-KDVIGKAI 244
Query: 815 TGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTR 874
TGSGKTLA+GIPIL + K+ + KK
Sbjct: 245 TGSGKTLAYGIPILERHLQKMAKANQS-----------------------------KKVI 275
Query: 875 NKLYALILAPTRELAIQVQNHILDAGKYTPVK---VACVVGGMSTEKQLRILNKCPHILV 931
N +I APTRELA QV +H+ K+TP+ + + GG+S +KQ R+L+ P I+V
Sbjct: 276 NPPTGIIFAPTRELAHQVVDHLNRIAKFTPLSQHGIVSITGGLSIQKQERLLSHGPGIVV 335
Query: 932 ATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPR- 990
ATPGR E +Q + L + +V+DE DR+++ GHF E IL+ + +PR
Sbjct: 336 ATPGRFLELLQKDMALVQRLSCTDIVVLDEADRLLQDGHFDEFVKILE---LFGKHRPRD 392
Query: 991 --------QTFVFSATLTHSLKNSLN--LKKGQSKSKKVSK---GDPSIKRLQDLLNIKS 1037
QT VFSAT + L L+ LK ++K + S D ++ L D L K
Sbjct: 393 NKELEWKWQTLVFSATFSRDLFGKLDKHLKSNKNKEEMGSSLIDNDEILQLLNDKLKFKD 452
Query: 1038 --PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQ 1095
P +VD K + +TE+ + C E+D YLYYF+L +PG TLVF NSI SVKRL
Sbjct: 453 SKPTLVDANPKEMVAGQITEALVECGPTERDLYLYYFLLLYPGSTLVFANSIDSVKRLAP 512
Query: 1096 LLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNN----SILLATDVAARGLDIPGIEHVIH 1151
L LK +H+SM Q+QRL+ L+RF++ ++ ++L+A+DVAARGLDIP I+HV H
Sbjct: 513 FLNNLKVPTFSIHSSMIQKQRLRTLERFKEASSKNSTAVLIASDVAARGLDIPNIDHVAH 572
Query: 1152 YHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIK-----MFNSLEKKV------ 1200
YH+PR++++YIHRSGRT RA EG++++ E ++ + N+ +K+
Sbjct: 573 YHLPRSADVYIHRSGRTGRAGKEGVSIMFCSPQESSGPLRKLRKLVANNTKKRTRLNVHN 632
Query: 1201 DLPDFPIDESVLSLIKKRIDLAKSIEYLESKIKKNRP-DNWLHRSG 1245
D+ P++ ++S IK R+ LA + E R DNW+H +
Sbjct: 633 DVKLLPLEMDLVSQIKPRVTLASKLADAERSSSSTRKEDNWVHEAA 678
Score = 246 bits (629), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 176/524 (33%), Positives = 255/524 (48%), Gaps = 112/524 (21%)
Query: 138 VDTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAE 197
VD + +D V + W ++ + L ++ PT IQ +P A+ KD++G A
Sbjct: 186 VDLTLPDDNEVNLPYWDDLSLSSFTLNGLSALEYEKPTAIQKRTIPLAIEG-KDVIGKAI 244
Query: 198 TGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTR 257
TGSGKTLA+GIPIL + K+ + KK
Sbjct: 245 TGSGKTLAYGIPILERHLQKMAKANQS-----------------------------KKVI 275
Query: 258 NKLYALILAPTRELAIQVQNHILDAGKYTPVK---VACVVGGMSTEKQLRILNKCPHILV 314
N +I APTRELA QV +H+ K+TP+ + + GG+S +KQ R+L+ P I+V
Sbjct: 276 NPPTGIIFAPTRELAHQVVDHLNRIAKFTPLSQHGIVSITGGLSIQKQERLLSHGPGIVV 335
Query: 315 ATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQ 374
ATPGR E +Q + L + +V+DE DR+++ GHF E IL+ + +PR
Sbjct: 336 ATPGRFLELLQKDMALVQRLSCTDIVVLDEADRLLQDGHFDEFVKILE---LFGKHRPRD 392
Query: 375 TMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGD 434
E QT VFSAT + L L+ +K+K
Sbjct: 393 N-------------------KELEWKWQTLVFSATFSRDLFGKLDKHLKSNKNK------ 427
Query: 435 PSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCE 494
E++G + L +DE ILQ
Sbjct: 428 ---------------------EEMGSS--------LIDNDE--------ILQL------- 443
Query: 495 EIQDLLNIKS--PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCN 552
+ D L K P +VD K + +TE+ + C E+D YLYYF+L +PG TLVF N
Sbjct: 444 -LNDKLKFKDSKPTLVDANPKEMVAGQITEALVECGPTERDLYLYYFLLLYPGSTLVFAN 502
Query: 553 SISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNN----SILLATDVAARGL 608
SI SVKRL L LK +H+SM Q+QRL+ L+RF++ ++ ++L+A+DVAARGL
Sbjct: 503 SIDSVKRLAPFLNNLKVPTFSIHSSMIQKQRLRTLERFKEASSKNSTAVLIASDVAARGL 562
Query: 609 DIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDE 652
DIP I+HV HYH+PR++++YIHRSGRT RA EG++++ E
Sbjct: 563 DIPNIDHVAHYHLPRSADVYIHRSGRTGRAGKEGVSIMFCSPQE 606
Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%), Gaps = 4/71 (5%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTPVK---VACVVGGMSTEKQLRILNKCPHILVATPG 1412
+I APTRELA QV +H+ K+TP+ + + GG+S +KQ R+L+ P I+VATPG
Sbjct: 280 GIIFAPTRELAHQVVDHLNRIAKFTPLSQHGIVSITGGLSIQKQERLLSHGPGIVVATPG 339
Query: 1413 A-LSLKRIDLA 1422
L L + D+A
Sbjct: 340 RFLELLQKDMA 350
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEIPLYIK-----MFNSLEKKV------DLPDFPI 1286
D ++HRSGRT RA EG++++ E ++ + N+ +K+ D+ P+
Sbjct: 580 DVYIHRSGRTGRAGKEGVSIMFCSPQESSGPLRKLRKLVANNTKKRTRLNVHNDVKLLPL 639
Query: 1287 DESVLSLIKKRIDLAKSIEYLESKIKKNRP-DNWLEKAAKDMDI 1329
+ ++S IK R+ LA + E R DNW+ +AA+++ I
Sbjct: 640 EMDLVSQIKPRVTLASKLADAERSSSSTRKEDNWVHEAAEELGI 683
>sp|Q4IBS2|MAK5_GIBZE ATP-dependent RNA helicase MAK5 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=MAK5 PE=3 SV=2
Length = 781
Score = 278 bits (712), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 190/520 (36%), Positives = 274/520 (52%), Gaps = 73/520 (14%)
Query: 756 DTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAET 815
D + ED V MA WV N+ II A+ + F PTKIQ +P ++A D++G A+T
Sbjct: 205 DYKDQED--VDMAAWVSLNLSPQIISAIAKLKFMKPTKIQKRTIPE-IVAGHDVIGKAQT 261
Query: 816 GSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRN 875
GSGKTLAFGIP++ E E++E+ VK+T
Sbjct: 262 GSGKTLAFGIPMV-------------------------ERWLEMQEQG------VKRT-- 288
Query: 876 KLYALILAPTRELAIQVQNHI--LDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVAT 933
+L+L+PTRELA Q+ +H+ L G + V V GG+S KQ R L K I++ T
Sbjct: 289 GPMSLVLSPTRELAKQLGDHLKALCDGLPSAPYVCVVTGGLSILKQQRQLEKA-DIVIGT 347
Query: 934 PGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRV------------ 981
PGRLWE + ++ KI +LV+DE DR+ + G F E ++I+ +
Sbjct: 348 PGRLWEVLSGDRALQSKFAKIRFLVVDEADRLFKVGQFKEAEDIIGALDGKSPGDDAESE 407
Query: 982 ------TMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNI 1035
+ RQT VFSAT L+ L K K D + L L
Sbjct: 408 EESDEEDEDDEDAARQTLVFSATFDKDLQTKL-----AGKGKSSGNDDEKMAYLMKCLKF 462
Query: 1036 KS-PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGR-TLVFCNSISSVKRL 1093
+ PK +D+ + + L E I C EKD YLY ++ +PGR TLVF NSIS+V+RL
Sbjct: 463 RGEPKFIDVNPVSQMAEGLREGLIECGAMEKDLYLYTVLILNPGRRTLVFTNSISAVRRL 522
Query: 1094 TQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYH 1153
T LLT L + LPLH+ M Q+ R ++L+RF NSIL+ATDVAARGLDI ++ V+HYH
Sbjct: 523 TPLLTNLNLTALPLHSQMAQKARHRSLERFTASRNSILIATDVAARGLDIKEVDQVLHYH 582
Query: 1154 VPRTSEIYIHRSGRTARANNEGLTLVLIESDEI--------PLYIKMFNSLEKKVDLPDF 1205
VPR+++ YIHRSGRTAR + G++++L +E+ ++ ++++ +
Sbjct: 583 VPRSADTYIHRSGRTARGESSGISVILCAPEEVLPTRRLASKVHAVRSAGVKREHFIQTL 642
Query: 1206 PIDESVLSLIKKRIDLAKSI-EYLESKIKKNRPDNWLHRS 1244
ID S +K R+DLAK I + + +K K + D WL +
Sbjct: 643 LIDRKAASRLKPRVDLAKKIADTILAKEKAHSDDTWLRNA 682
Score = 250 bits (639), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 184/518 (35%), Positives = 256/518 (49%), Gaps = 110/518 (21%)
Query: 139 DTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAET 198
D + ED V MA WV N+ II A+ + F PTKIQ +P ++A D++G A+T
Sbjct: 205 DYKDQED--VDMAAWVSLNLSPQIISAIAKLKFMKPTKIQKRTIPE-IVAGHDVIGKAQT 261
Query: 199 GSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRN 258
GSGKTLAFGIP++ E E++E+ VK+T
Sbjct: 262 GSGKTLAFGIPMV-------------------------ERWLEMQEQG------VKRT-- 288
Query: 259 KLYALILAPTRELAIQVQNHI--LDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVAT 316
+L+L+PTRELA Q+ +H+ L G + V V GG+S KQ R L K I++ T
Sbjct: 289 GPMSLVLSPTRELAKQLGDHLKALCDGLPSAPYVCVVTGGLSILKQQRQLEKA-DIVIGT 347
Query: 317 PGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTM 376
PGRLWE + ++ KI +LV+DE DR+ + G F E ++I + + P
Sbjct: 348 PGRLWEVLSGDRALQSKFAKIRFLVVDEADRLFKVGQFKEAEDI---IGALDGKSP---- 400
Query: 377 IESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPS 436
G E + D + RQT VFSAT L+ L G+ KS
Sbjct: 401 ---GDDAESEEESDEEDEDDEDAARQTLVFSATFDKDLQTKL---AGKGKSS-------- 446
Query: 437 IKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEI 496
DEK +YL C +
Sbjct: 447 ----------------------------------GNDDEKMAYLMK----------CLKF 462
Query: 497 QDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGR-TLVFCNSIS 555
+ PK +D+ + + L E I C EKD YLY ++ +PGR TLVF NSIS
Sbjct: 463 RG-----EPKFIDVNPVSQMAEGLREGLIECGAMEKDLYLYTVLILNPGRRTLVFTNSIS 517
Query: 556 SVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEH 615
+V+RLT LLT L + LPLH+ M Q+ R ++L+RF NSIL+ATDVAARGLDI ++
Sbjct: 518 AVRRLTPLLTNLNLTALPLHSQMAQKARHRSLERFTASRNSILIATDVAARGLDIKEVDQ 577
Query: 616 VIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDEI 653
V+HYHVPR+++ YIHRSGRTAR + G++V+L +E+
Sbjct: 578 VLHYHVPRSADTYIHRSGRTARGESSGISVILCAPEEV 615
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 60/112 (53%), Gaps = 9/112 (8%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEI--------PLYIKMFNSLEKKVDLPDFPIDES 1289
D ++HRSGRTAR + G++++L +E+ ++ ++++ + ID
Sbjct: 588 DTYIHRSGRTARGESSGISVILCAPEEVLPTRRLASKVHAVRSAGVKREHFIQTLLIDRK 647
Query: 1290 VLSLIKKRIDLAKSI-EYLESKIKKNRPDNWLEKAAKDMDIIIDDENLIQPN 1340
S +K R+DLAK I + + +K K + D WL AA ++ + D ++L + N
Sbjct: 648 AASRLKPRVDLAKKIADTILAKEKAHSDDTWLRNAADELGVEYDSDDLEEIN 699
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 37/61 (60%), Gaps = 3/61 (4%)
Query: 1356 ALILAPTRELAIQVQNHI--LDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGA 1413
+L+L+PTRELA Q+ +H+ L G + V V GG+S KQ R L K I++ TPG
Sbjct: 292 SLVLSPTRELAKQLGDHLKALCDGLPSAPYVCVVTGGLSILKQQRQLEKA-DIVIGTPGR 350
Query: 1414 L 1414
L
Sbjct: 351 L 351
>sp|Q59ZH9|MAK5_CANAL ATP-dependent RNA helicase MAK5 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=MAK5 PE=3 SV=1
Length = 782
Score = 276 bits (707), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 188/533 (35%), Positives = 287/533 (53%), Gaps = 64/533 (12%)
Query: 748 ANKELLEVDTSN-----NEDMFVQMAEWVKFNIPETI----IRALYQKGFKTPTKIQSMV 798
+N EL V +N +D + + W + ++ +I + L Q FK PT IQ
Sbjct: 168 SNDELNAVSFANLDLPLPDDNEINLPNWQEGDLGSSISAYTLYGLSQLDFKKPTPIQKET 227
Query: 799 MPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEE 858
+P AL + KD++G A TGSGKTLA+GIPIL + L N +++ D
Sbjct: 228 IPIAL-SGKDVIGKATTGSGKTLAYGIPILEKYIQSL-NLIKQNNKD------------- 272
Query: 859 LEEESANTTEFVKKTRNKLYALILAPTRELAIQVQNHILDAGKYTPVK---VACVVGGMS 915
K N +I APTRELA QV +H+ KY+P+ + + GG+S
Sbjct: 273 -------------KKINHPTGIIFAPTRELAHQVVDHLNKLAKYSPLSTRGIVSITGGLS 319
Query: 916 TEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELK 975
+KQ R+L P I+VATPGR+ E +Q L I+ +V+DE DR+++ GHF E +
Sbjct: 320 IQKQQRLLRHGPGIIVATPGRMLELVQGDSELAKRLASIDIIVLDEADRLLQDGHFDEFE 379
Query: 976 NIL-----DRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQ 1030
IL +R QT VFSAT + L L+ + + KS + D ++ L
Sbjct: 380 KILELFGKNRPKSKSIEWKWQTLVFSATFSRDLFRKLD-RHQKGKSSSLMGNDEIVQLLN 438
Query: 1031 DLLNIKS--PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSIS 1088
+ L K P +VD K ++ +TE+ + C E+D YLYYF+L + G TLVF NSI
Sbjct: 439 EKLKFKDKKPTLVDANPKEIVSGQITEALVECGPTERDLYLYYFLLMYKGSTLVFANSID 498
Query: 1089 SVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRD--QNN--SILLATDVAARGLDIP 1144
SVKRL LL L +H+SM Q+QRL+ L++F++ Q N ++L+A+DVAARGLDIP
Sbjct: 499 SVKRLVPLLNNLNIPAFSIHSSMIQKQRLRALEKFKEASQKNEVAVLVASDVAARGLDIP 558
Query: 1145 GIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSL-------E 1197
I+HV+HYH+PR++++YIHRSGRTARA EG++ + E ++ L E
Sbjct: 559 NIDHVVHYHLPRSADVYIHRSGRTARAGKEGVSAMFCSPQEASGPLRKLRRLVAGNSNKE 618
Query: 1198 KKVDLPD----FPIDESVLSLIKKRIDLAKSIEYLE-SKIKKNRPDNWLHRSG 1245
++++ + PI+ ++S IK R++++ + S + D+W+ ++
Sbjct: 619 SRLNMHNDVKLLPIEMDLVSQIKPRVEISSKLADASISSTATRKEDSWVKQAA 671
Score = 147 bits (371), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 127/402 (31%), Positives = 192/402 (47%), Gaps = 67/402 (16%)
Query: 106 EEIQSDEPSSKKLKQKKKKKQTYTSANKELLEVDTSN-----NEDMFVQMAEWVKFNIPE 160
E Q D +S+++ K + S N EL V +N +D + + W + ++
Sbjct: 144 ENNQEDANTSERVSNNDKDDKLAES-NDELNAVSFANLDLPLPDDNEINLPNWQEGDLGS 202
Query: 161 TI----IRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVN 216
+I + L Q FK PT IQ +P AL + KD++G A TGSGKTLA+GIPIL +
Sbjct: 203 SISAYTLYGLSQLDFKKPTPIQKETIPIAL-SGKDVIGKATTGSGKTLAYGIPILEKYIQ 261
Query: 217 KLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQ 276
L N +++ D K N +I APTRELA QV
Sbjct: 262 SL-NLIKQNNKD--------------------------KKINHPTGIIFAPTRELAHQVV 294
Query: 277 NHILDAGKYTPVK---VACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTE 333
+H+ KY+P+ + + GG+S +KQ R+L P I+VATPGR+ E +Q
Sbjct: 295 DHLNKLAKYSPLSTRGIVSITGGLSIQKQQRLLRHGPGIIVATPGRMLELVQGDSELAKR 354
Query: 334 LYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNILDRVT 393
L I+ +V+DE DR+++ GHF E + IL+ + ++P+ IE
Sbjct: 355 LASIDIIVLDEADRLLQDGHFDEFEKILE---LFGKNRPKSKSIE--------------- 396
Query: 394 MTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKS--PKI 451
QT VFSAT + L L+ + + KS + D ++ L + L K P +
Sbjct: 397 -----WKWQTLVFSATFSRDLFRKLD-RHQKGKSSSLMGNDEIVQLLNEKLKFKDKKPTL 450
Query: 452 VDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLC 493
VD K ++ +TE+ + C E+D YLYYF+L + G TL
Sbjct: 451 VDANPKEIVSGQITEALVECGPTERDLYLYYFLLMYKGSTLV 492
Score = 145 bits (366), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 122/188 (64%), Gaps = 12/188 (6%)
Query: 494 EEIQDLLN------IKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRT 547
+EI LLN K P +VD K ++ +TE+ + C E+D YLYYF+L + G T
Sbjct: 431 DEIVQLLNEKLKFKDKKPTLVDANPKEIVSGQITEALVECGPTERDLYLYYFLLMYKGST 490
Query: 548 LVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRD--QNN--SILLATDV 603
LVF NSI SVKRL LL L +H+SM Q+QRL+ L++F++ Q N ++L+A+DV
Sbjct: 491 LVFANSIDSVKRLVPLLNNLNIPAFSIHSSMIQKQRLRALEKFKEASQKNEVAVLVASDV 550
Query: 604 AARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDEI--PLKTKFNL 661
AARGLDIP I+HV+HYH+PR++++YIHRSGRTARA EG++ + E PL+ L
Sbjct: 551 AARGLDIPNIDHVVHYHLPRSADVYIHRSGRTARAGKEGVSAMFCSPQEASGPLRKLRRL 610
Query: 662 QEEENNEE 669
+N+E
Sbjct: 611 VAGNSNKE 618
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTPVK---VACVVGGMSTEKQLRILNKCPHILVATPG 1412
+I APTRELA QV +H+ KY+P+ + + GG+S +KQ R+L P I+VATPG
Sbjct: 280 GIIFAPTRELAHQVVDHLNKLAKYSPLSTRGIVSITGGLSIQKQQRLLRHGPGIIVATPG 339
Query: 1413 AL 1414
+
Sbjct: 340 RM 341
>sp|A5DPU0|MAK5_PICGU ATP-dependent RNA helicase MAK5 OS=Meyerozyma guilliermondii (strain
ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 /
NRRL Y-324) GN=MAK5 PE=3 SV=1
Length = 754
Score = 273 bits (699), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 196/558 (35%), Positives = 293/558 (52%), Gaps = 72/558 (12%)
Query: 716 DDQVNKTEEIQSDEPHSKKLKQKKKKKQTYTSANKELLEVDTSNNEDMFVQMAEWVKFNI 775
DD V +T+ SDEP K K++K K N + VD S +D + +W N+
Sbjct: 134 DDPVTETKR-PSDEPDLKSKKKQKPNKDDELRENA-FVGVDASLPKD--TDLPKWSMENV 189
Query: 776 PETI--IRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVN 833
+ I L GFK PT IQ +P AL KD++G A TGSGKTLA+GIPIL
Sbjct: 190 SLSTYTINGLAGCGFKEPTAIQRKAIPLALQG-KDVIGKATTGSGKTLAYGIPIL----- 243
Query: 834 KLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQ 893
E L +LE ++ T A+I APTRELA QV
Sbjct: 244 -------------------ERCLAQLESKT--------NTIKPPTAMIFAPTRELAHQVV 276
Query: 894 NHILDAGKYTPVK---VACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTE 950
+H+ K++P+ + + GG+S +KQ R+L+ P ILVATPGR E ++ +
Sbjct: 277 DHMNKIAKFSPLAQNGIVSITGGLSIQKQERLLSHGPSILVATPGRCLELMEKSVDLVNR 336
Query: 951 LYKINYLVIDETDRMIESGHFPELKNILDRVT------MTETSQPRQTFVFSATLTHSLK 1004
+ + +V+DE DR+++ GHF E + ILD + S+ QT VFSAT + L
Sbjct: 337 MALTDMIVLDEADRLLQDGHFEEFEKILDMLNKHRPKKTQGVSRRWQTLVFSATFSRDLF 396
Query: 1005 NSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIK--SPKIVDLTEKIGITKTLTESKILCKH 1062
L+ K ++K + D + L L + +P ++D K ++ +TE+ + C
Sbjct: 397 GKLSNNKPRNKESSFIENDEILSLLNTKLQFRDRTPAVIDANPKEIVSGKVTEALVECGP 456
Query: 1063 DEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDR 1122
E+D YLYYF+L +PG TLVF N+I SVKRL LT L +H+SM Q+QRL+ L+R
Sbjct: 457 SERDLYLYYFLLMYPGSTLVFANAIDSVKRLVPFLTNLNIPTFSIHSSMIQKQRLRALER 516
Query: 1123 FRDQN----NSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTL 1178
F+ ++L+A+DVAARGLDIP I+HV HYH+PR++++Y+HRSGRTARA EG+++
Sbjct: 517 FKAAGEKNQTAVLIASDVAARGLDIPNIDHVAHYHLPRSADVYVHRSGRTARAGKEGVSV 576
Query: 1179 VLIESDEIPLYIKMFNSLEKKV--------------DLPDFPIDESVLSLIKKRIDLAKS 1224
+ E F L K V D+ PI+ +++ +K R++++
Sbjct: 577 MFCSPQEAS---GPFRKLRKLVADSANKGSRMNMHSDVKLLPIEMDLVTQLKPRVNISSK 633
Query: 1225 IEYLE-SKIKKNRPDNWL 1241
+ S + + D+W+
Sbjct: 634 LANSTISTVSTKKSDSWM 651
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 132/401 (32%), Positives = 194/401 (48%), Gaps = 66/401 (16%)
Query: 99 DDQVNKTEEIQSDEPSSKKLKQKKKKKQTYTSANKELLEVDTSNNEDMFVQMAEWVKFNI 158
DD V +T+ SDEP K K++K K N + VD S +D + +W N+
Sbjct: 134 DDPVTETKR-PSDEPDLKSKKKQKPNKDDELRENA-FVGVDASLPKD--TDLPKWSMENV 189
Query: 159 PETI--IRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVN 216
+ I L GFK PT IQ +P AL KD++G A TGSGKTLA+GIPIL
Sbjct: 190 SLSTYTINGLAGCGFKEPTAIQRKAIPLALQG-KDVIGKATTGSGKTLAYGIPIL----- 243
Query: 217 KLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQ 276
E L +LE ++ T A+I APTRELA QV
Sbjct: 244 -------------------ERCLAQLESKT--------NTIKPPTAMIFAPTRELAHQVV 276
Query: 277 NHILDAGKYTPVK---VACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTE 333
+H+ K++P+ + + GG+S +KQ R+L+ P ILVATPGR E ++ +
Sbjct: 277 DHMNKIAKFSPLAQNGIVSITGGLSIQKQERLLSHGPSILVATPGRCLELMEKSVDLVNR 336
Query: 334 LYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNILDRVT 393
+ + +V+DE DR+++ GHF E + ILD M +P++T
Sbjct: 337 MALTDMIVLDEADRLLQDGHFEEFEKILD---MLNKHRPKKTQ----------------- 376
Query: 394 MTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNI--KSPKI 451
S+ QT VFSAT + L L+ K ++K + D + L L ++P +
Sbjct: 377 --GVSRRWQTLVFSATFSRDLFGKLSNNKPRNKESSFIENDEILSLLNTKLQFRDRTPAV 434
Query: 452 VDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTL 492
+D K ++ +TE+ + C E+D YLYYF+L +PG TL
Sbjct: 435 IDANPKEIVSGKVTEALVECGPSERDLYLYYFLLMYPGSTL 475
Score = 149 bits (376), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/169 (47%), Positives = 113/169 (66%), Gaps = 10/169 (5%)
Query: 494 EEIQDLLNIK------SPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRT 547
+EI LLN K +P ++D K ++ +TE+ + C E+D YLYYF+L +PG T
Sbjct: 415 DEILSLLNTKLQFRDRTPAVIDANPKEIVSGKVTEALVECGPSERDLYLYYFLLMYPGST 474
Query: 548 LVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQN----NSILLATDV 603
LVF N+I SVKRL LT L +H+SM Q+QRL+ L+RF+ ++L+A+DV
Sbjct: 475 LVFANAIDSVKRLVPFLTNLNIPTFSIHSSMIQKQRLRALERFKAAGEKNQTAVLIASDV 534
Query: 604 AARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDE 652
AARGLDIP I+HV HYH+PR++++Y+HRSGRTARA EG++V+ E
Sbjct: 535 AARGLDIPNIDHVAHYHLPRSADVYVHRSGRTARAGKEGVSVMFCSPQE 583
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTPVK---VACVVGGMSTEKQLRILNKCPHILVATPG 1412
A+I APTRELA QV +H+ K++P+ + + GG+S +KQ R+L+ P ILVATPG
Sbjct: 262 AMIFAPTRELAHQVVDHMNKIAKFSPLAQNGIVSITGGLSIQKQERLLSHGPSILVATPG 321
Score = 43.5 bits (101), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 58/112 (51%), Gaps = 18/112 (16%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKV--------------DLPD 1283
D ++HRSGRTARA EG++++ E F L K V D+
Sbjct: 557 DVYVHRSGRTARAGKEGVSVMFCSPQEAS---GPFRKLRKLVADSANKGSRMNMHSDVKL 613
Query: 1284 FPIDESVLSLIKKRIDLAKSIEYLE-SKIKKNRPDNWLEKAAKDMDIIIDDE 1334
PI+ +++ +K R++++ + S + + D+W+++AA+++ + +++E
Sbjct: 614 LPIEMDLVTQLKPRVNISSKLANSTISTVSTKKSDSWMKEAAEELGVDMEEE 665
>sp|A2QWW0|MAK5_ASPNC ATP-dependent RNA helicase mak5 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=mak5 PE=3 SV=1
Length = 766
Score = 271 bits (694), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 186/508 (36%), Positives = 273/508 (53%), Gaps = 62/508 (12%)
Query: 770 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 829
W + I+ +L + F TPT +Q +P +L D++G A TGSGKTLAFGIPIL
Sbjct: 194 WESLGLSPEILTSLSKMKFTTPTLVQKSCIPQ-ILDGHDVIGKASTGSGKTLAFGIPIL- 251
Query: 830 GIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELA 889
+ LE+ +++ EE+ +T ALI++PTRELA
Sbjct: 252 ---------------EHYLEKRRQDLRAGKEEKKKDTAPI---------ALIMSPTRELA 287
Query: 890 IQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHF 946
Q+ HI + + P ++A + GG+S +KQ R+L I++ TPGR+WE + G
Sbjct: 288 HQLAKHIGELALHAPGSNARIALLTGGLSVQKQQRVLAGA-DIVIGTPGRVWEVLSSGQG 346
Query: 947 HLTELYKINYLVIDETDRMIESGHFPELKNIL---DRV-------------TMTETSQPR 990
+ ++ +I +LVIDE DR++ GHF E + IL DRV + R
Sbjct: 347 LIRKMSEIKFLVIDEADRLLSEGHFKEAEEILGALDRVEEGNFGGEESEDEEKEDARSER 406
Query: 991 QTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDL-LNIKSPKIVDLTEKIGI 1049
QT VFSAT L+ L K + +S + LQ L + PK +D+ +
Sbjct: 407 QTLVFSATFHRDLQQKLAGKARWTGGDIMSNKESMEYLLQKLKFREEKPKFIDVNPVSQM 466
Query: 1050 TKTLTESKILCKHDEKDSYLYYFILQHP-GRTLVFCNSISSVKRLTQLLTMLKCSPLPLH 1108
+ L E + C EKD YLY +L +P RTLVF NSIS+V+RLTQLL L L LH
Sbjct: 467 AEGLKEGIVECGAMEKDLYLYTLLLYNPKHRTLVFTNSISAVRRLTQLLQNLGLPALALH 526
Query: 1109 ASMNQRQRLKNLDRFRDQNN---SILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRS 1165
+SM Q+ RL++++RF + SIL+ATDVAARGLDI GI+ VIHYH PR ++ Y+HRS
Sbjct: 527 SSMAQKARLRSVERFSSPTSDPSSILVATDVAARGLDIKGIDFVIHYHAPRAADTYVHRS 586
Query: 1166 GRTARANNEGLTLVLIESDEIPLYIKMFNSLE------KKVDLPDFPIDESVLSLIKKRI 1219
GRTARA G ++++ +E+ +++ + KK+ L +D V+ +++R+
Sbjct: 587 GRTARAGASGKSVIICAPEEMVGVVRLAAKVHANMANGKKLPLESLELDRRVVLRVRQRV 646
Query: 1220 DLAKSIEYLESKIKKNR---PDNWLHRS 1244
DLA I +S I K + DNWL ++
Sbjct: 647 DLAAKI--TDSNIAKEKISAEDNWLQKA 672
Score = 246 bits (629), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 172/508 (33%), Positives = 253/508 (49%), Gaps = 101/508 (19%)
Query: 153 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 212
W + I+ +L + F TPT +Q +P +L D++G A TGSGKTLAFGIPIL
Sbjct: 194 WESLGLSPEILTSLSKMKFTTPTLVQKSCIPQ-ILDGHDVIGKASTGSGKTLAFGIPIL- 251
Query: 213 GIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELA 272
+ LE+ +++ EE+ +T ALI++PTRELA
Sbjct: 252 ---------------EHYLEKRRQDLRAGKEEKKKDTAPI---------ALIMSPTRELA 287
Query: 273 IQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHF 329
Q+ HI + + P ++A + GG+S +KQ R+L I++ TPGR+WE + G
Sbjct: 288 HQLAKHIGELALHAPGSNARIALLTGGLSVQKQQRVLAGA-DIVIGTPGRVWEVLSSGQG 346
Query: 330 HLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNIL 389
+ ++ +I +LVIDE DR++ GHF E + IL + +E G+F ++
Sbjct: 347 LIRKMSEIKFLVIDEADRLLSEGHFKEAEEILGALDR----------VEEGNFGGEESED 396
Query: 390 DRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSP 449
+ + RQT VFSAT
Sbjct: 397 EEKEDARSE--RQTLVFSATFHR------------------------------------- 417
Query: 450 KIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDLLNIKSPKIVD 509
DL +K+ T I+ K+S Y L ++++ + PK +D
Sbjct: 418 ---DLQQKLAGKARWTGGDIMSN---KESMEY----------LLQKLK--FREEKPKFID 459
Query: 510 LTEKIGITKTLTESKILCKHDEKDSYLYYFILQHP-GRTLVFCNSISSVKRLTQLLTMLK 568
+ + + L E + C EKD YLY +L +P RTLVF NSIS+V+RLTQLL L
Sbjct: 460 VNPVSQMAEGLKEGIVECGAMEKDLYLYTLLLYNPKHRTLVFTNSISAVRRLTQLLQNLG 519
Query: 569 CSPLPLHASMNQRQRLKNLDRFRDQNN---SILLATDVAARGLDIPGIEHVIHYHVPRTS 625
L LH+SM Q+ RL++++RF + SIL+ATDVAARGLDI GI+ VIHYH PR +
Sbjct: 520 LPALALHSSMAQKARLRSVERFSSPTSDPSSILVATDVAARGLDIKGIDFVIHYHAPRAA 579
Query: 626 EIYIHRSGRTARANNEGLTVVLIESDEI 653
+ Y+HRSGRTARA G +V++ +E+
Sbjct: 580 DTYVHRSGRTARAGASGKSVIICAPEEM 607
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 65/123 (52%), Gaps = 11/123 (8%)
Query: 1223 KSIEYLESKIKKNRPDNWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLE------ 1276
K I+++ D ++HRSGRTARA G ++++ +E+ +++ +
Sbjct: 565 KGIDFVIHYHAPRAADTYVHRSGRTARAGASGKSVIICAPEEMVGVVRLAAKVHANMANG 624
Query: 1277 KKVDLPDFPIDESVLSLIKKRIDLAKSIEYLESKIKKNR---PDNWLEKAAKDMDIIIDD 1333
KK+ L +D V+ +++R+DLA I +S I K + DNWL+KAA+D+ + D
Sbjct: 625 KKLPLESLELDRRVVLRVRQRVDLAAKI--TDSNIAKEKISAEDNWLQKAAEDLGVEYDS 682
Query: 1334 ENL 1336
E
Sbjct: 683 EEF 685
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTP---VKVACVVGGMSTEKQLRILNKCPHILVATPG 1412
ALI++PTRELA Q+ HI + + P ++A + GG+S +KQ R+L I++ TPG
Sbjct: 277 ALIMSPTRELAHQLAKHIGELALHAPGSNARIALLTGGLSVQKQQRVLAGA-DIVIGTPG 335
>sp|P38112|MAK5_YEAST ATP-dependent RNA helicase MAK5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=MAK5 PE=1 SV=1
Length = 773
Score = 270 bits (691), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 178/545 (32%), Positives = 283/545 (51%), Gaps = 106/545 (19%)
Query: 765 VQMAEWVKFN-IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 823
V + EW + TI+++L F PT+IQ +P ++ D++G A TGSGKTLA+
Sbjct: 167 VNLPEWTNLAPLSMTILQSLQNLNFLRPTEIQKKSIP-VIMQGVDVMGKASTGSGKTLAY 225
Query: 824 GIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILA 883
GIPI+ ++ + F +K + K +LI
Sbjct: 226 GIPIVEKLI----------------------------------SNFSQKNK-KPISLIFT 250
Query: 884 PTRELAIQVQNH-------ILDAGKYTPVKVACVVGGMSTEKQLRIL--NKCPHILVATP 934
PTRELA QV +H +L +Y+ + + GG+S +KQ R+L + I++ATP
Sbjct: 251 PTRELAHQVTDHLKKICEPVLAKSQYS---ILSLTGGLSIQKQQRLLKYDNSGQIVIATP 307
Query: 935 GRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNIL---------DRVTMTE 985
GR E ++ + + K+N L++DE DR+++ GHF E + I+ +R
Sbjct: 308 GRFLELLEKDNTLIKRFSKVNTLILDEADRLLQDGHFDEFEKIIKHLLVERRKNRENSEG 367
Query: 986 TSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKG----DPSIKRLQDLLNIKS-PKI 1040
+S+ QT +FSAT + L + L+ + Q K ++ + I+ L ++ S P I
Sbjct: 368 SSKIWQTLIFSATFSIDLFDKLSSSR-QVKDRRFKNNEDELNAVIQHLMSKIHFNSKPVI 426
Query: 1041 VDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTML 1100
+D + ++ + ES I C E+D Y YYF+ PG TL+FCN+I SVK+LT L L
Sbjct: 427 IDTNPESKVSSQIKESLIECPPLERDLYCYYFLTMFPGTTLIFCNAIDSVKKLTVYLNNL 486
Query: 1101 KCSPLPLHASMNQRQRLKNLDRFRDQN----------------NSILLATDVAARGLDIP 1144
+H+SM Q+ RLK+L+RF+ Q+ +++L+A+DVAARGLDIP
Sbjct: 487 GIPAFQIHSSMTQKNRLKSLERFKQQSAKQKTINHSNPDSVQLSTVLIASDVAARGLDIP 546
Query: 1145 GIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEI--PLY-----IKMFNSLE 1197
G++HVIHYH+PR+++IYIHRSGRTARA +EG++ ++ E PL + NS+
Sbjct: 547 GVQHVIHYHLPRSTDIYIHRSGRTARAGSEGVSAMICSPQESMGPLRKLRKTLATKNSVS 606
Query: 1198 KKVD--------------LPDFPIDESVLSLIKKRIDLAKSIEYLESKIKKN---RPDNW 1240
++ +P PI+ +LS +++R LA E + +I N + DNW
Sbjct: 607 TDLNSRSTNRKPIKWQNTVPLLPIETDILSQLRERSRLAG--ELADHEIASNSLRKDDNW 664
Query: 1241 LHRSG 1245
L ++
Sbjct: 665 LKKAA 669
Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 189/635 (29%), Positives = 308/635 (48%), Gaps = 150/635 (23%)
Query: 47 ENNEEEVEEAEADKEKTEGINVTVSSKKKKLKRKQNPSQVEVSELSA---NTNDPDDQVN 103
++N+E+V + D+E E N + S + +L +N ++ ELSA +++D D+Q N
Sbjct: 74 DSNKEKVGD---DQESVE--NESGSDSESELLEFKNLDDIKEGELSAASYSSSDEDEQGN 128
Query: 104 KTEEIQSDEPSSKKLKQKKKKKQTYTSANKELLEVDTSNNEDMFVQMAEWVKFN-IPETI 162
E + +PS + + NK++ D S V + EW + TI
Sbjct: 129 -IESSKLTDPSEDVDEDVDEDVLKENVFNKDINIDDISP-----VNLPEWTNLAPLSMTI 182
Query: 163 IRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPT 222
+++L F PT+IQ +P ++ D++G A TGSGKTLA+GIPI+ ++
Sbjct: 183 LQSLQNLNFLRPTEIQKKSIP-VIMQGVDVMGKASTGSGKTLAYGIPIVEKLI------- 234
Query: 223 EEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQNH---- 278
+ F +K + K +LI PTRELA QV +H
Sbjct: 235 ---------------------------SNFSQKNK-KPISLIFTPTRELAHQVTDHLKKI 266
Query: 279 ---ILDAGKYTPVKVACVVGGMSTEKQLRIL--NKCPHILVATPGRLWEFIQLGHFHLTE 333
+L +Y+ + + GG+S +KQ R+L + I++ATPGR E ++ + +
Sbjct: 267 CEPVLAKSQYS---ILSLTGGLSIQKQQRLLKYDNSGQIVIATPGRFLELLEKDNTLIKR 323
Query: 334 LYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNILDRVT 393
K+N L++DE DR+++ GHF E + I+ + ++E +R
Sbjct: 324 FSKVNTLILDEADRLLQDGHFDEFEKII-----------KHLLVERRK--------NREN 364
Query: 394 MTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVD 453
+S+ QT +FSAT + +D
Sbjct: 365 SEGSSKIWQTLIFSATFS----------------------------------------ID 384
Query: 454 LTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDLLNIKSPKIVDLTEK 513
L +K+ ++ + + + DE ++ ++QH L +I N K P I+D +
Sbjct: 385 LFDKLSSSRQVKDRRFKNNEDELNA-----VIQH----LMSKIH--FNSK-PVIIDTNPE 432
Query: 514 IGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKCSPLP 573
++ + ES I C E+D Y YYF+ PG TL+FCN+I SVK+LT L L
Sbjct: 433 SKVSSQIKESLIECPPLERDLYCYYFLTMFPGTTLIFCNAIDSVKKLTVYLNNLGIPAFQ 492
Query: 574 LHASMNQRQRLKNLDRFRDQN----------------NSILLATDVAARGLDIPGIEHVI 617
+H+SM Q+ RLK+L+RF+ Q+ +++L+A+DVAARGLDIPG++HVI
Sbjct: 493 IHSSMTQKNRLKSLERFKQQSAKQKTINHSNPDSVQLSTVLIASDVAARGLDIPGVQHVI 552
Query: 618 HYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDE 652
HYH+PR+++IYIHRSGRTARA +EG++ ++ E
Sbjct: 553 HYHLPRSTDIYIHRSGRTARAGSEGVSAMICSPQE 587
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 26/121 (21%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEI--PLY-----IKMFNSLEKKVD---------- 1280
D ++HRSGRTARA +EG++ ++ E PL + NS+ ++
Sbjct: 561 DIYIHRSGRTARAGSEGVSAMICSPQESMGPLRKLRKTLATKNSVSTDLNSRSTNRKPIK 620
Query: 1281 ----LPDFPIDESVLSLIKKRIDLAKSIEYLESKIKKN---RPDNWLEKAAKDMDIIIDD 1333
+P PI+ +LS +++R LA E + +I N + DNWL+KAA ++ I +D
Sbjct: 621 WQNTVPLLPIETDILSQLRERSRLAG--ELADHEIASNSLRKDDNWLKKAADELGIDVDS 678
Query: 1334 E 1334
+
Sbjct: 679 D 679
Score = 44.3 bits (103), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 31/144 (21%)
Query: 1356 ALILAPTRELAIQVQNH-------ILDAGKYTPVKVACVVGGMSTEKQLRIL--NKCPHI 1406
+LI PTRELA QV +H +L +Y+ + + GG+S +KQ R+L + I
Sbjct: 246 SLIFTPTRELAHQVTDHLKKICEPVLAKSQYS---ILSLTGGLSIQKQQRLLKYDNSGQI 302
Query: 1407 LVATPGALSLKRIDLAKSIEYLESKIKKNRPDNWLEKAAKDMDIIIDDE--NLIQPKANS 1464
++ATPG +E LE DN L K ++ +I DE L+Q
Sbjct: 303 VIATPGRF----------LELLEK-------DNTLIKRFSKVNTLILDEADRLLQDGHFD 345
Query: 1465 RENALMSKALVSKRKELQSLLGKS 1488
++ LV +RK ++ G S
Sbjct: 346 EFEKIIKHLLVERRKNRENSEGSS 369
>sp|A3GG51|MAK5_PICST ATP-dependent RNA helicase MAK5 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=MAK5 PE=3 SV=2
Length = 836
Score = 270 bits (691), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 193/559 (34%), Positives = 287/559 (51%), Gaps = 77/559 (13%)
Query: 723 EEIQSDEP-HSKKLKQKKKKKQTYTSANKELLEVDTSNNEDMFVQMAEWVKFNIPETIIR 781
E +Q +P H ++L + + + + E + + NED F++ +
Sbjct: 184 EPVQESKPEHDEELSENVFQHSQFVLPDDEDINLPHWQNEDS--------NFSLSPYTLH 235
Query: 782 ALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEE 841
L GF PT IQ +P A KD+VG A TGSGKTLA+GIPIL
Sbjct: 236 GLSVLGFDKPTPIQKKTIPLAAEG-KDVVGKAITGSGKTLAYGIPIL------------- 281
Query: 842 DENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQNHILDAGK 901
E+ L L + N KK N +I APTRELA QV +H+ K
Sbjct: 282 -----------EKYLSNLSIINQNRQ---KKIINHPTGIIFAPTRELAHQVVSHLNSLAK 327
Query: 902 YTPVK---VACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTELYKINYLV 958
Y+P+ + + GG+S +KQ R+L+ P I+VATPGR+ E +Q L + +V
Sbjct: 328 YSPLSTNGIVSITGGLSIQKQERLLSHGPGIIVATPGRILELLQKDEDLTKRLASTDIIV 387
Query: 959 IDETDRMIESGHFPELKNILDRVTMTETSQPR--------QTFVFSATLTHSLKNSLNLK 1010
+DE DR+++ GHF E + ILD + ++P+ QT VFSAT + L L+
Sbjct: 388 LDEADRLLQDGHFEEFETILD---LFRKNRPKNKTFPWKWQTLVFSATFSRDLFGKLD-- 442
Query: 1011 KGQSKSKKVSKG------DPSIKRLQDLLNIKS--PKIVDLTEKIGITKTLTESKILCKH 1062
K Q K+ S+G D + L D L K P +VD K ++ +TE+ + C
Sbjct: 443 KNQKSHKRNSEGSSLIGNDEILNLLNDKLKFKDTRPALVDANPKEIVSGNITEALVECGP 502
Query: 1063 DEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDR 1122
E+D YLYYF+L + G TLVF NSI SVKRL L L +H+SM Q+QRL+ L+R
Sbjct: 503 TERDLYLYYFLLMYKGSTLVFANSIDSVKRLVPFLNNLNIPAFAIHSSMIQKQRLRALER 562
Query: 1123 FRD----QNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTL 1178
F+ + ++L+A+DVAARGLDIP I+HV HYH+PR++++YIHRSGRTARA EG+++
Sbjct: 563 FQKASEKNDTAVLIASDVAARGLDIPNIDHVAHYHLPRSADVYIHRSGRTARAGKEGVSV 622
Query: 1179 VLIESDEIPLYIKMF-----------NSLEKKVDLPDFPIDESVLSLIKKRIDLAKSIEY 1227
+ E ++ L D+ PI+ ++S +K R+ +A +
Sbjct: 623 MFCSPQEASGPLRKLRRLVANNSTKGGRLNMHNDVKLLPIEMDLVSQLKPRVIIASKLAD 682
Query: 1228 LE-SKIKKNRPDNWLHRSG 1245
+ S + D+W+ ++
Sbjct: 683 ADISNTSTRKEDSWVKQAA 701
Score = 248 bits (632), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 181/526 (34%), Positives = 256/526 (48%), Gaps = 114/526 (21%)
Query: 144 EDMFVQMAEW----VKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETG 199
+D + + W F++ + L GF PT IQ +P A KD+VG A TG
Sbjct: 211 DDEDINLPHWQNEDSNFSLSPYTLHGLSVLGFDKPTPIQKKTIPLAAEG-KDVVGKAITG 269
Query: 200 SGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNK 259
SGKTLA+GIPIL E+ L L + N KK N
Sbjct: 270 SGKTLAYGIPIL------------------------EKYLSNLSIINQNRQ---KKIINH 302
Query: 260 LYALILAPTRELAIQVQNHILDAGKYTPVK---VACVVGGMSTEKQLRILNKCPHILVAT 316
+I APTRELA QV +H+ KY+P+ + + GG+S +KQ R+L+ P I+VAT
Sbjct: 303 PTGIIFAPTRELAHQVVSHLNSLAKYSPLSTNGIVSITGGLSIQKQERLLSHGPGIIVAT 362
Query: 317 PGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTM 376
PGR+ E +Q L + +V+DE DR+++ GHF E + ILD + ++P+
Sbjct: 363 PGRILELLQKDEDLTKRLASTDIIVLDEADRLLQDGHFEEFETILD---LFRKNRPKNKT 419
Query: 377 IESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPS 436
FP QT VFSAT + L L+ K Q K+ S+G
Sbjct: 420 -----FP---------------WKWQTLVFSATFSRDLFGKLD--KNQKSHKRNSEGSSL 457
Query: 437 IKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEI 496
I ++LN+ L +K+ T
Sbjct: 458 IGN-DEILNL-------LNDKLKFKDT--------------------------------- 476
Query: 497 QDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISS 556
P +VD K ++ +TE+ + C E+D YLYYF+L + G TLVF NSI S
Sbjct: 477 -------RPALVDANPKEIVSGNITEALVECGPTERDLYLYYFLLMYKGSTLVFANSIDS 529
Query: 557 VKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRD----QNNSILLATDVAARGLDIPG 612
VKRL L L +H+SM Q+QRL+ L+RF+ + ++L+A+DVAARGLDIP
Sbjct: 530 VKRLVPFLNNLNIPAFAIHSSMIQKQRLRALERFQKASEKNDTAVLIASDVAARGLDIPN 589
Query: 613 IEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDEI--PLK 656
I+HV HYH+PR++++YIHRSGRTARA EG++V+ E PL+
Sbjct: 590 IDHVAHYHLPRSADVYIHRSGRTARAGKEGVSVMFCSPQEASGPLR 635
Score = 61.2 bits (147), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTPVK---VACVVGGMSTEKQLRILNKCPHILVATPG 1412
+I APTRELA QV +H+ KY+P+ + + GG+S +KQ R+L+ P I+VATPG
Sbjct: 305 GIIFAPTRELAHQVVSHLNSLAKYSPLSTNGIVSITGGLSIQKQERLLSHGPGIIVATPG 364
Query: 1413 AL 1414
+
Sbjct: 365 RI 366
Score = 41.2 bits (95), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 52/104 (50%), Gaps = 12/104 (11%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEIPLYIKMF-----------NSLEKKVDLPDFPI 1286
D ++HRSGRTARA EG++++ E ++ L D+ PI
Sbjct: 603 DVYIHRSGRTARAGKEGVSVMFCSPQEASGPLRKLRRLVANNSTKGGRLNMHNDVKLLPI 662
Query: 1287 DESVLSLIKKRIDLAKSIEYLE-SKIKKNRPDNWLEKAAKDMDI 1329
+ ++S +K R+ +A + + S + D+W+++AA+++ +
Sbjct: 663 EMDLVSQLKPRVIIASKLADADISNTSTRKEDSWVKQAAEELGV 706
>sp|A5DUB2|MAK5_LODEL ATP-dependent RNA helicase MAK5 OS=Lodderomyces elongisporus (strain
ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL
YB-4239) GN=MAK5 PE=3 SV=1
Length = 855
Score = 270 bits (689), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 180/506 (35%), Positives = 275/506 (54%), Gaps = 79/506 (15%)
Query: 765 VQMAEW----VKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKT 820
+ + EW ++ + I+ L F TPT IQ +P AL KD++G A TGSGKT
Sbjct: 212 IDLPEWGEDKIETCLSPYILNGLSNMKFTTPTPIQKRTIPLALEG-KDVIGKATTGSGKT 270
Query: 821 LAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYAL 880
LA+GIPIL + L+ V ++ E K N +
Sbjct: 271 LAYGIPILEKYIQSLDT-----------------VKRKVRE----------KVVNHPTGI 303
Query: 881 ILAPTRELAIQVQNHILDAGKYTPVK---VACVVGGMSTEKQLRILNKCPHILVATPGRL 937
I APTRELA QV +H+ +Y+P+ + V GG+S +KQ R+L+ P I+VATPGR+
Sbjct: 304 IFAPTRELAHQVVDHLNKIAQYSPLSTKGIVSVTGGLSIQKQERLLSFGPGIIVATPGRM 363
Query: 938 WEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPR------- 990
E Q + L + +V+DE DR+++ GHF E + IL+ + ++P+
Sbjct: 364 LELCQNDQELVKRLSMTDIIVLDEADRLLQDGHFEEFEKILE---LFNKNRPKNDKSIEW 420
Query: 991 --QTFVFSATLTHSLKNSLNLKKGQ----SKSKKVSKGDPS---------IKRLQDLLNI 1035
QT VFSAT + L L+ ++ Q K ++K D I+ L++ L
Sbjct: 421 KWQTLVFSATFSRDLFGKLDKQQKQKSVKGNGKALNKADSGNSLVQNDEIIELLREKLRF 480
Query: 1036 K--SPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRL 1093
K +P +VD K ++ +TE+ + C E+D YLYYF+L + G TLVF NSI SVKRL
Sbjct: 481 KDKAPSLVDANPKEIVSGQITEALVECGPLERDLYLYYFLLMYKGSTLVFANSIDSVKRL 540
Query: 1094 TQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQN----NSILLATDVAARGLDIPGIEHV 1149
LL L +H+SM Q+QRL++L+RF+D + ++L+A+DVAARGLDIP I+HV
Sbjct: 541 VPLLNNLNIPAFAIHSSMIQKQRLRSLERFKDASEKNQTAVLVASDVAARGLDIPNIDHV 600
Query: 1150 IHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMF---------NSLEKKV 1200
HYH+PR++++YIHRSGRTARA EG++++ E ++ N+ +K+
Sbjct: 601 AHYHLPRSADVYIHRSGRTARAGKEGVSVMFCSPQEASGPLRKLRKLVASNAANNKNQKI 660
Query: 1201 ----DLPDFPIDESVLSLIKKRIDLA 1222
D+ P++ ++S ++ R++LA
Sbjct: 661 NVHSDVKLLPVEMDLVSQLRPRVELA 686
Score = 249 bits (637), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 183/524 (34%), Positives = 265/524 (50%), Gaps = 108/524 (20%)
Query: 148 VQMAEW----VKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKT 203
+ + EW ++ + I+ L F TPT IQ +P AL KD++G A TGSGKT
Sbjct: 212 IDLPEWGEDKIETCLSPYILNGLSNMKFTTPTPIQKRTIPLALEG-KDVIGKATTGSGKT 270
Query: 204 LAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYAL 263
LA+GIPIL + L+ V ++ E K N +
Sbjct: 271 LAYGIPILEKYIQSLDT-----------------VKRKVRE----------KVVNHPTGI 303
Query: 264 ILAPTRELAIQVQNHILDAGKYTPVK---VACVVGGMSTEKQLRILNKCPHILVATPGRL 320
I APTRELA QV +H+ +Y+P+ + V GG+S +KQ R+L+ P I+VATPGR+
Sbjct: 304 IFAPTRELAHQVVDHLNKIAQYSPLSTKGIVSVTGGLSIQKQERLLSFGPGIIVATPGRM 363
Query: 321 WEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESG 380
E Q + L + +V+DE DR+++ GHF E + IL+ + ++P+
Sbjct: 364 LELCQNDQELVKRLSMTDIIVLDEADRLLQDGHFEEFEKILE---LFNKNRPKND----- 415
Query: 381 HFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRL 440
K+I QT VFSAT + L L+ Q K K V KG+
Sbjct: 416 -----KSI---------EWKWQTLVFSATFSRDLFGKLD---KQQKQKSV-KGN------ 451
Query: 441 QDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDLL 500
K L K D +S + + E +++ L
Sbjct: 452 --------------------------GKALNKADSGNSLVQ-------NDEIIELLREKL 478
Query: 501 NIK--SPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVK 558
K +P +VD K ++ +TE+ + C E+D YLYYF+L + G TLVF NSI SVK
Sbjct: 479 RFKDKAPSLVDANPKEIVSGQITEALVECGPLERDLYLYYFLLMYKGSTLVFANSIDSVK 538
Query: 559 RLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQN----NSILLATDVAARGLDIPGIE 614
RL LL L +H+SM Q+QRL++L+RF+D + ++L+A+DVAARGLDIP I+
Sbjct: 539 RLVPLLNNLNIPAFAIHSSMIQKQRLRSLERFKDASEKNQTAVLVASDVAARGLDIPNID 598
Query: 615 HVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDEI--PLK 656
HV HYH+PR++++YIHRSGRTARA EG++V+ E PL+
Sbjct: 599 HVAHYHLPRSADVYIHRSGRTARAGKEGVSVMFCSPQEASGPLR 642
Score = 60.1 bits (144), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%), Gaps = 3/62 (4%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTPVK---VACVVGGMSTEKQLRILNKCPHILVATPG 1412
+I APTRELA QV +H+ +Y+P+ + V GG+S +KQ R+L+ P I+VATPG
Sbjct: 302 GIIFAPTRELAHQVVDHLNKIAQYSPLSTKGIVSVTGGLSIQKQERLLSFGPGIIVATPG 361
Query: 1413 AL 1414
+
Sbjct: 362 RM 363
>sp|A6ZL85|MAK5_YEAS7 ATP-dependent RNA helicase MAK5 OS=Saccharomyces cerevisiae (strain
YJM789) GN=MAK5 PE=3 SV=1
Length = 769
Score = 268 bits (684), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 177/545 (32%), Positives = 282/545 (51%), Gaps = 106/545 (19%)
Query: 765 VQMAEWVKFN-IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 823
V + EW + TI+++L F PT+IQ +P ++ D++G A TGSGKTLA+
Sbjct: 163 VNLPEWTNLAPLSMTILQSLQNLNFLRPTEIQKKSIP-VIMQGVDVMGKASTGSGKTLAY 221
Query: 824 GIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILA 883
GIPI+ ++ + F +K + K +LI
Sbjct: 222 GIPIVEKLI----------------------------------SNFSQKNK-KPISLIFT 246
Query: 884 PTRELAIQVQNH-------ILDAGKYTPVKVACVVGGMSTEKQLRIL--NKCPHILVATP 934
PTRELA QV +H +L +Y+ + + GG+S +KQ R+L + I++ATP
Sbjct: 247 PTRELAHQVTDHLKKICEPVLAKSQYS---ILSLTGGLSIQKQQRLLKYDNSGQIVIATP 303
Query: 935 GRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNIL---------DRVTMTE 985
GR E ++ + + K++ L++DE DR+++ GHF E + I+ +R
Sbjct: 304 GRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKIIKHLLVERRKNRENSEG 363
Query: 986 TSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPS----IKRLQDLLNIKS-PKI 1040
+S+ QT +FSAT + L + L+ + Q K ++ + I+ L ++ S P I
Sbjct: 364 SSKIWQTLIFSATFSIDLFDKLSSSR-QVKDRRFKNNEDELNAVIQHLMSKIHFNSKPVI 422
Query: 1041 VDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTML 1100
+D + ++ + ES I C E+D Y YYF+ PG TL+FCN+I SVK+LT L L
Sbjct: 423 IDTNPESKVSSQIKESLIECPPLERDLYCYYFLTMFPGTTLIFCNAIDSVKKLTVYLNNL 482
Query: 1101 KCSPLPLHASMNQRQRLKNLDRFRDQN----------------NSILLATDVAARGLDIP 1144
+H+SM Q+ RLK+L+RF+ Q+ +++L+A+DVAARGLDIP
Sbjct: 483 GIPAFQIHSSMTQKNRLKSLERFKQQSAKQKTINHSNPDSVQLSTVLIASDVAARGLDIP 542
Query: 1145 GIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEI--PLY-----IKMFNSLE 1197
G++HVIHYH+PR+++IYIHRSGRTARA EG++ ++ E PL + NS+
Sbjct: 543 GVQHVIHYHLPRSTDIYIHRSGRTARAGCEGVSAMICSPQESMGPLRKLRKTLATKNSVS 602
Query: 1198 KKVD--------------LPDFPIDESVLSLIKKRIDLAKSIEYLESKIKKN---RPDNW 1240
++ +P PI+ +LS +++R LA E + +I N + DNW
Sbjct: 603 TDLNSRSTNRKPIKWQNTVPLLPIETDILSQLRERSRLAG--ELADHEIASNSLRKDDNW 660
Query: 1241 LHRSG 1245
L ++
Sbjct: 661 LKKAA 665
Score = 247 bits (631), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 163/531 (30%), Positives = 260/531 (48%), Gaps = 136/531 (25%)
Query: 148 VQMAEWVKFN-IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 206
V + EW + TI+++L F PT+IQ +P ++ D++G A TGSGKTLA+
Sbjct: 163 VNLPEWTNLAPLSMTILQSLQNLNFLRPTEIQKKSIP-VIMQGVDVMGKASTGSGKTLAY 221
Query: 207 GIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILA 266
GIPI+ ++ + F +K + K +LI
Sbjct: 222 GIPIVEKLI----------------------------------SNFSQKNK-KPISLIFT 246
Query: 267 PTRELAIQVQNH-------ILDAGKYTPVKVACVVGGMSTEKQLRIL--NKCPHILVATP 317
PTRELA QV +H +L +Y+ + + GG+S +KQ R+L + I++ATP
Sbjct: 247 PTRELAHQVTDHLKKICEPVLAKSQYS---ILSLTGGLSIQKQQRLLKYDNSGQIVIATP 303
Query: 318 GRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMI 377
GR E ++ + + K++ L++DE DR+++ GHF E + I+ + ++
Sbjct: 304 GRFLELLEKDNTLIKRFSKVDTLILDEADRLLQDGHFDEFEKII-----------KHLLV 352
Query: 378 ESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSI 437
E +R +S+ QT +FSAT +
Sbjct: 353 ERRK--------NRENSEGSSKIWQTLIFSATFS-------------------------- 378
Query: 438 KRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQ 497
+DL +K+ ++ + + + DE ++ ++QH L +I
Sbjct: 379 --------------IDLFDKLSSSRQVKDRRFKNNEDELNA-----VIQH----LMSKIH 415
Query: 498 DLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSV 557
N K P I+D + ++ + ES I C E+D Y YYF+ PG TL+FCN+I SV
Sbjct: 416 --FNSK-PVIIDTNPESKVSSQIKESLIECPPLERDLYCYYFLTMFPGTTLIFCNAIDSV 472
Query: 558 KRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQN----------------NSILLAT 601
K+LT L L +H+SM Q+ RLK+L+RF+ Q+ +++L+A+
Sbjct: 473 KKLTVYLNNLGIPAFQIHSSMTQKNRLKSLERFKQQSAKQKTINHSNPDSVQLSTVLIAS 532
Query: 602 DVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDE 652
DVAARGLDIPG++HVIHYH+PR+++IYIHRSGRTARA EG++ ++ E
Sbjct: 533 DVAARGLDIPGVQHVIHYHLPRSTDIYIHRSGRTARAGCEGVSAMICSPQE 583
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 26/121 (21%)
Query: 1238 DNWLHRSGRTARANNEGLTLVLIESDEI--PLY-----IKMFNSLEKKVD---------- 1280
D ++HRSGRTARA EG++ ++ E PL + NS+ ++
Sbjct: 557 DIYIHRSGRTARAGCEGVSAMICSPQESMGPLRKLRKTLATKNSVSTDLNSRSTNRKPIK 616
Query: 1281 ----LPDFPIDESVLSLIKKRIDLAKSIEYLESKIKKN---RPDNWLEKAAKDMDIIIDD 1333
+P PI+ +LS +++R LA E + +I N + DNWL+KAA ++ I +D
Sbjct: 617 WQNTVPLLPIETDILSQLRERSRLAG--ELADHEIASNSLRKDDNWLKKAADELGIDVDS 674
Query: 1334 E 1334
+
Sbjct: 675 D 675
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 66/144 (45%), Gaps = 31/144 (21%)
Query: 1356 ALILAPTRELAIQVQNH-------ILDAGKYTPVKVACVVGGMSTEKQLRIL--NKCPHI 1406
+LI PTRELA QV +H +L +Y+ + + GG+S +KQ R+L + I
Sbjct: 242 SLIFTPTRELAHQVTDHLKKICEPVLAKSQYS---ILSLTGGLSIQKQQRLLKYDNSGQI 298
Query: 1407 LVATPGALSLKRIDLAKSIEYLESKIKKNRPDNWLEKAAKDMDIIIDDE--NLIQPKANS 1464
++ATPG +E LE DN L K +D +I DE L+Q
Sbjct: 299 VIATPGRF----------LELLEK-------DNTLIKRFSKVDTLILDEADRLLQDGHFD 341
Query: 1465 RENALMSKALVSKRKELQSLLGKS 1488
++ LV +RK ++ G S
Sbjct: 342 EFEKIIKHLLVERRKNRENSEGSS 365
>sp|Q6FY67|MAK5_CANGA ATP-dependent RNA helicase MAK5 OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=MAK5
PE=3 SV=1
Length = 733
Score = 256 bits (654), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 175/518 (33%), Positives = 260/518 (50%), Gaps = 98/518 (18%)
Query: 764 FVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAF 823
F +M K +IP A L KDI+G A TGSGKTLA+
Sbjct: 175 FTEMTPIQKLSIP-------------------------AALEGKDIMGKASTGSGKTLAY 209
Query: 824 GIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILA 883
GIPI+ ++ +N + +I
Sbjct: 210 GIPIIEKMIKSKDNL-------------------------------------RTNGIIFT 232
Query: 884 PTRELAIQVQNHILDAG----KYTPVKVACVVGGMSTEKQLRIL--NKCPHILVATPGRL 937
PTRELA QV H+ + K P + + GG+S +KQ R+L + I+VATPGR
Sbjct: 233 PTRELAQQVTKHLQNVCSMLLKKNPYMILSLTGGLSIQKQERLLKYDGSARIVVATPGRF 292
Query: 938 WEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETS----QPRQTF 993
E I+ + KI+ LV+DE DR+++ GHF E + IL + S + QT
Sbjct: 293 LELIEKNEELMKRFAKIDVLVLDEADRLLQDGHFDEFEKILKHLGRIRKSLKNMEYWQTL 352
Query: 994 VFSATLTHSLKNSL--NLKKGQSKSKKVSKGDPSIKRLQDLLNIKS-PKIVDLTEKIGIT 1050
++SAT + L + L + K ++ SK S+ + +K L +N KS P ++D + I+
Sbjct: 353 IYSATFSTDLFDKLANSSWKKKNNSKDESEMESVLKHLMTKINFKSKPMMIDANPEDKIS 412
Query: 1051 KTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHAS 1110
+ ES I C E+D Y YYF+ +PG TL+FCNSI SVK+L L L + +H+S
Sbjct: 413 AQIKESLIECAPLERDLYCYYFVTLYPGTTLIFCNSIESVKKLNAYLINLGINSFQIHSS 472
Query: 1111 MNQRQRLKNLDRFR---DQNN-----SILLATDVAARGLDIPGIEHVIHYHVPRTSEIYI 1162
M Q+ RLKNL++F +NN ++L+A+DVAARGLDI GI+HV+HYH+P +++ YI
Sbjct: 473 MTQKNRLKNLEKFEAMASKNNHLGKPTVLIASDVAARGLDIKGIKHVVHYHLPHSADTYI 532
Query: 1163 HRSGRTARANNEGLTLVLIESDEI--PL--YIKMFNSLEK----------KVDLPDFPID 1208
HRSGRTAR +NEG+ +++ E PL ++ S E+ + +P PI+
Sbjct: 533 HRSGRTARGDNEGVAVMICSPQEAMGPLRKLRRLLASKEQISKSTKNKKWQQTVPLLPIE 592
Query: 1209 ESVLSLIKKRIDLAKSIEYLESKIKKNRPD-NWLHRSG 1245
+L +++R LA I E + R D NWL ++
Sbjct: 593 IDILQQLRERSSLANDIAEHELASRSLRKDSNWLKQAA 630
Score = 241 bits (615), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 167/511 (32%), Positives = 241/511 (47%), Gaps = 131/511 (25%)
Query: 157 NIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVN 216
++ T I L GF T IQ + +P+AL KDI+G A TGSGKTLA+GIPI+ ++
Sbjct: 161 DLSMTTINGLSNLGFTEMTPIQKLSIPAALEG-KDIMGKASTGSGKTLAYGIPIIEKMIK 219
Query: 217 KLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQ 276
+N + +I PTRELA QV
Sbjct: 220 SKDNL-------------------------------------RTNGIIFTPTRELAQQVT 242
Query: 277 NHILDAG----KYTPVKVACVVGGMSTEKQLRIL--NKCPHILVATPGRLWEFIQLGHFH 330
H+ + K P + + GG+S +KQ R+L + I+VATPGR E I+
Sbjct: 243 KHLQNVCSMLLKKNPYMILSLTGGLSIQKQERLLKYDGSARIVVATPGRFLELIEKNEEL 302
Query: 331 LTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNILD 390
+ KI+ LV+DE DR+++ GHF E + IL + S LKN+
Sbjct: 303 MKRFAKIDVLVLDEADRLLQDGHFDEFEKILKHLGRIRKS--------------LKNM-- 346
Query: 391 RVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPK 450
+ QT ++SAT + L + L S KK
Sbjct: 347 --------EYWQTLIYSATFSTDLFDKL----ANSSWKK--------------------- 373
Query: 451 IVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDLLNIKS-PKIVD 509
K++ KD +L+H + +N KS P ++D
Sbjct: 374 ---------------------KNNSKDESEMESVLKH--------LMTKINFKSKPMMID 404
Query: 510 LTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKC 569
+ I+ + ES I C E+D Y YYF+ +PG TL+FCNSI SVK+L L L
Sbjct: 405 ANPEDKISAQIKESLIECAPLERDLYCYYFVTLYPGTTLIFCNSIESVKKLNAYLINLGI 464
Query: 570 SPLPLHASMNQRQRLKNLDRFR---DQNN-----SILLATDVAARGLDIPGIEHVIHYHV 621
+ +H+SM Q+ RLKNL++F +NN ++L+A+DVAARGLDI GI+HV+HYH+
Sbjct: 465 NSFQIHSSMTQKNRLKNLEKFEAMASKNNHLGKPTVLIASDVAARGLDIKGIKHVVHYHL 524
Query: 622 PRTSEIYIHRSGRTARANNEGLTVVLIESDE 652
P +++ YIHRSGRTAR +NEG+ V++ E
Sbjct: 525 PHSADTYIHRSGRTARGDNEGVAVMICSPQE 555
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 39/70 (55%), Gaps = 8/70 (11%)
Query: 1349 NLRYSWDALILAPTRELAIQVQNHILDAG----KYTPVKVACVVGGMSTEKQLRIL--NK 1402
NLR + +I PTRELA QV H+ + K P + + GG+S +KQ R+L +
Sbjct: 223 NLRT--NGIIFTPTRELAQQVTKHLQNVCSMLLKKNPYMILSLTGGLSIQKQERLLKYDG 280
Query: 1403 CPHILVATPG 1412
I+VATPG
Sbjct: 281 SARIVVATPG 290
>sp|Q6BQ61|RRP3_DEBHA ATP-dependent rRNA helicase RRP3 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=RRP3 PE=3 SV=2
Length = 477
Score = 234 bits (598), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 176/540 (32%), Positives = 268/540 (49%), Gaps = 91/540 (16%)
Query: 716 DDQVNKTEEIQSDEPHSKKLKQKKKKKQTYTSANKE-LLEVDTSNNEDMFVQMAEWVKFN 774
D +NK + S + ++ L +K KK A +E E + + N D V +KF
Sbjct: 6 DGMINKKSKTHSKKLDARALAEKIKKNALKQQAQEEPAKEENVAENFDTVVDPTAELKFK 65
Query: 775 -------IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 827
IPE ++ A+ Q F PT IQS +P AL KDI+G A+TGSGKT AF IPI
Sbjct: 66 SFNELKLIPE-LLEAIQQMKFTKPTPIQSEAIPHALEG-KDIIGLAQTGSGKTAAFAIPI 123
Query: 828 LTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRE 887
L + E ++A Y L+LAPTRE
Sbjct: 124 LQAL---------------------------WEAQAA------------YYGLVLAPTRE 144
Query: 888 LAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFH 947
LA Q++ G ++ C+VGGM Q R L + PHILVATPGR+ + ++ H
Sbjct: 145 LAYQIKETFDALGSSMGLRSVCIVGGMDMMDQARDLMRKPHILVATPGRIMDHLE--HTK 202
Query: 948 LTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSL 1007
L + YLV+DE DR+++ P L IL ++ T+ R T++FSAT+T+
Sbjct: 203 GFSLKNLKYLVMDEADRLLDMDFGPALDKIL-KIIPTQ----RTTYLFSATMTNK----- 252
Query: 1008 NLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDS 1067
I +LQ ++ +P V ++ K L +S +L K++
Sbjct: 253 ------------------IAKLQRA-SLHNPVRVAVSNKYQTADNLVQSMMLVSDGYKNT 293
Query: 1068 YLYYFILQHPGRTLV-FCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQ 1126
YL + + + G++++ F + + +R L +L S +PLH + Q QRL +L++F+
Sbjct: 294 YLIHLLNEFLGKSIIIFTRTCAHSQRTALLARILGFSAVPLHGQLTQAQRLGSLNKFKAG 353
Query: 1127 NNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEI 1186
+IL+ATDVAARGLDIP ++ VI+Y +P S+ YIHR GRTARA G ++ LI ++
Sbjct: 354 KANILIATDVAARGLDIPSVDIVINYDIPTDSKAYIHRVGRTARAGKSGKSISLITQYDL 413
Query: 1187 PLYIKMFNSLEKKVDLPDFPI-DESVLSLIKKRIDLAKSIEYLESK-------IKKNRPD 1238
+Y+++ + L KK LP P ++VL + +D A + ++K KKNR D
Sbjct: 414 EMYLRIESVLGKK--LPKDPSPSKAVLDTLHVHVDRASAEAIRQTKDFHEKRNPKKNRDD 471
Score = 197 bits (501), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 165/558 (29%), Positives = 240/558 (43%), Gaps = 163/558 (29%)
Query: 99 DDQVNKTEEIQSDEPSSKKLKQKKKKKQTYTSANKE-LLEVDTSNNEDMFVQMAEWVKFN 157
D +NK + S + ++ L +K KK A +E E + + N D V +KF
Sbjct: 6 DGMINKKSKTHSKKLDARALAEKIKKNALKQQAQEEPAKEENVAENFDTVVDPTAELKFK 65
Query: 158 -------IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPI 210
IPE ++ A+ Q F PT IQS +P AL KDI+G A+TGSGKT AF IPI
Sbjct: 66 SFNELKLIPE-LLEAIQQMKFTKPTPIQSEAIPHALEG-KDIIGLAQTGSGKTAAFAIPI 123
Query: 211 LTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRE 270
L + E ++A Y L+LAPTRE
Sbjct: 124 LQAL---------------------------WEAQAA------------YYGLVLAPTRE 144
Query: 271 LAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFH 330
LA Q++ G ++ C+VGGM Q R L + PHILVATPGR+ + ++ H
Sbjct: 145 LAYQIKETFDALGSSMGLRSVCIVGGMDMMDQARDLMRKPHILVATPGRIMDHLE--HTK 202
Query: 331 LTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNILD 390
L + YLV+DE DR+++ P L IL + P Q
Sbjct: 203 GFSLKNLKYLVMDEADRLLDMDFGPALDKILKII-------PTQ---------------- 239
Query: 391 RVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPK 450
R T++FSAT+T+ I +LQ ++ +P
Sbjct: 240 ----------RTTYLFSATMTN-----------------------KIAKLQR-ASLHNPV 265
Query: 451 IVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDLLNIKSPKIVDL 510
V ++ K L +S +L K++YL + + + G+++
Sbjct: 266 RVAVSNKYQTADNLVQSMMLVSDGYKNTYLIHLLNEFLGKSI------------------ 307
Query: 511 TEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKCS 570
I T+T C H ++ + L R L F S
Sbjct: 308 ---IIFTRT-------CAHSQRTALL--------ARILGF-------------------S 330
Query: 571 PLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIH 630
+PLH + Q QRL +L++F+ +IL+ATDVAARGLDIP ++ VI+Y +P S+ YIH
Sbjct: 331 AVPLHGQLTQAQRLGSLNKFKAGKANILIATDVAARGLDIPSVDIVINYDIPTDSKAYIH 390
Query: 631 RSGRTARANNEGLTVVLI 648
R GRTARA G ++ LI
Sbjct: 391 RVGRTARAGKSGKSISLI 408
Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%)
Query: 1353 SWDALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPG 1412
++ L+LAPTRELA Q++ G ++ C+VGGM Q R L + PHILVATPG
Sbjct: 133 AYYGLVLAPTRELAYQIKETFDALGSSMGLRSVCIVGGMDMMDQARDLMRKPHILVATPG 192
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 1240 WLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPI-DESVLSLIKKRI 1298
++HR GRTARA G ++ LI ++ +Y+++ + L KK LP P ++VL + +
Sbjct: 388 YIHRVGRTARAGKSGKSISLITQYDLEMYLRIESVLGKK--LPKDPSPSKAVLDTLHVHV 445
Query: 1299 DLAKSIEYLESK-------IKKNRPD 1317
D A + ++K KKNR D
Sbjct: 446 DRASAEAIRQTKDFHEKRNPKKNRDD 471
>sp|Q6CH58|RRP3_YARLI ATP-dependent rRNA helicase RRP3 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=RRP3 PE=3 SV=1
Length = 480
Score = 234 bits (597), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 154/484 (31%), Positives = 242/484 (50%), Gaps = 88/484 (18%)
Query: 739 KKKKQTYTSANKELLEVDTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMV 798
KK + YTS +EVD S Q + + ++I + F PT IQ+
Sbjct: 45 KKSSKNYTS-----VEVDESEE-----QTKTFKDLGVIDSICETCEELKFTKPTPIQAQS 94
Query: 799 MPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEE 858
+P AL R DI+G A+TGSGKT AF IP+L + ENP
Sbjct: 95 IPYALEGR-DIIGLAQTGSGKTAAFAIPVLQSL---YENP-------------------- 130
Query: 859 LEEESANTTEFVKKTRNKLYALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEK 918
LY ++LAPTRELA Q+ G ++ A VVGGM+
Sbjct: 131 ----------------QPLYCVVLAPTRELAYQISETFEALGSAMGLRTAVVVGGMNMMT 174
Query: 919 QLRILNKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNIL 978
Q L+K PH++VATPGRL + ++ + L + +LV+DE DR+++ P L IL
Sbjct: 175 QAVALSKKPHVIVATPGRLVDHLE--NTKGFSLRTLKFLVMDEADRLLDMEFGPSLDKIL 232
Query: 979 DRVTMTETSQPRQ--TFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIK 1036
+ PRQ T++FSAT+T SK +K+ + ++
Sbjct: 233 KVI-------PRQRNTYLFSATMT-------------SKVEKLQRA-----------SLV 261
Query: 1037 SPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLV-FCNSISSVKRLTQ 1095
P V ++ K L + + C KD++L Y + ++ G +++ F + S +R++
Sbjct: 262 DPVRVAVSTKYQTADNLLQYMVFCPFKHKDTHLVYLVSENAGNSMIIFARTKSDTQRISL 321
Query: 1096 LLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVP 1155
LL L +PLH ++Q RL L++F+ + +IL+ATDVA+RGLDIP ++ VI+Y +P
Sbjct: 322 LLRNLGYGAIPLHGDLSQTARLGALNKFKSGSRNILIATDVASRGLDIPAVDLVINYDIP 381
Query: 1156 RTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLI 1215
S+ YIHR GRTARA G ++ L+ ++ LY+++ +L KK+D +P++ + L
Sbjct: 382 SDSKSYIHRVGRTARAGRAGKSVALVSQYDLELYLRIEGALGKKLD--SYPLESEAVMLF 439
Query: 1216 KKRI 1219
+R+
Sbjct: 440 SERV 443
Score = 187 bits (474), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 165/635 (25%), Positives = 262/635 (41%), Gaps = 187/635 (29%)
Query: 90 ELSANTNDPDDQVNKTEEIQSDEPSSKKLKQKKKKKQTYTSANKELLEVDTSNNEDMFVQ 149
E S + ++ +D + +EI S + ++ KK + YTS +EVD S Q
Sbjct: 15 EESGSESEDNDAI--AQEILDTTKSDNEEEEPKKSSKNYTS-----VEVDESEE-----Q 62
Query: 150 MAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIP 209
+ + ++I + F PT IQ+ +P AL R DI+G A+TGSGKT AF IP
Sbjct: 63 TKTFKDLGVIDSICETCEELKFTKPTPIQAQSIPYALEGR-DIIGLAQTGSGKTAAFAIP 121
Query: 210 ILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTR 269
+L + ENP LY ++LAPTR
Sbjct: 122 VLQSL---YENP------------------------------------QPLYCVVLAPTR 142
Query: 270 ELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHF 329
ELA Q+ G ++ A VVGGM+ Q L+K PH++VATPGRL + ++ +
Sbjct: 143 ELAYQISETFEALGSAMGLRTAVVVGGMNMMTQAVALSKKPHVIVATPGRLVDHLE--NT 200
Query: 330 HLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNIL 389
L + +LV+DE DR+++ P L IL + PRQ
Sbjct: 201 KGFSLRTLKFLVMDEADRLLDMEFGPSLDKILKVI-------PRQ--------------- 238
Query: 390 DRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSP 449
R T++FSAT+T SK +K+ + ++ P
Sbjct: 239 -----------RNTYLFSATMT-------------SKVEKLQRA-----------SLVDP 263
Query: 450 KIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDLLNIKSPKIVD 509
V ++ K L + + C KD++L Y + ++ G ++
Sbjct: 264 VRVAVSTKYQTADNLLQYMVFCPFKHKDTHLVYLVSENAGNSM----------------- 306
Query: 510 LTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKC 569
I+ + D+ +L++ G
Sbjct: 307 ---------------IIFARTKSDTQRISLLLRNLG-----------------------Y 328
Query: 570 SPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYI 629
+PLH ++Q RL L++F+ + +IL+ATDVA+RGLDIP ++ VI+Y +P S+ YI
Sbjct: 329 GAIPLHGDLSQTARLGALNKFKSGSRNILIATDVASRGLDIPAVDLVINYDIPSDSKSYI 388
Query: 630 HRSGRTARANNEGLTVVLIES-----------------DEIPLKTKFNLQEEENNEEEER 672
HR GRTARA G +V L+ D PL+++ + E E R
Sbjct: 389 HRVGRTARAGRAGKSVALVSQYDLELYLRIEGALGKKLDSYPLESEAVMLFSERVAEASR 448
Query: 673 AEADKEKTEDINVTVSSKKKKLKRKQNPSQVEVSE 707
A + K ED + K+ K +K+ ++++ E
Sbjct: 449 AAIQEMKGED----GTKKRSKFDKKRRRDEMDIGE 479
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 36/59 (61%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGAL 1414
++LAPTRELA Q+ G ++ A VVGGM+ Q L+K PH++VATPG L
Sbjct: 135 CVVLAPTRELAYQISETFEALGSAMGLRTAVVVGGMNMMTQAVALSKKPHVIVATPGRL 193
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 1239 NWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRI 1298
+++HR GRTARA G ++ L+ ++ LY+++ +L KK+D +P++ + L +R+
Sbjct: 386 SYIHRVGRTARAGRAGKSVALVSQYDLELYLRIEGALGKKLD--SYPLESEAVMLFSERV 443
>sp|Q2UNB7|RRP3_ASPOR ATP-dependent rRNA helicase rrp3 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=rrp3 PE=3 SV=1
Length = 472
Score = 231 bits (588), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 171/554 (30%), Positives = 264/554 (47%), Gaps = 126/554 (22%)
Query: 690 KKKKLKRKQNPSQVEVSELSANTNDPDDQVNKTEEIQSDEPHSKKLKQKKKKKQTYTSAN 749
KK+K+ R + P Q + S+ A+++ +D T E Q EP S+ KQ K +
Sbjct: 5 KKRKIAR-EAPQQEDHSDSEAHSSASEDAAPNTTE-QEQEP-SEAPKQAPK-------SF 54
Query: 750 KELLEVDTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDI 809
KEL + E + A G+K PT IQ+ +P AL R D+
Sbjct: 55 KEL---------------------GLIEQLCEACDSMGYKAPTAIQAEAIPLALQGR-DL 92
Query: 810 VGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEF 869
+G AETGSGKT AF +PIL +++K
Sbjct: 93 IGLAETGSGKTAAFALPILQALMDK----------------------------------- 117
Query: 870 VKKTRNKLYALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHI 929
+ + L+LAPTRELA Q+ G V+ +VGGM Q L K PHI
Sbjct: 118 ----PSSFFGLVLAPTRELAYQISQAFEGLGSTISVRSTVLVGGMDMVSQSIALGKKPHI 173
Query: 930 LVATPGRLWEFIQLGHFHLTE---LYKINYLVIDETDRMIESGHFPELKNILDRVTMTET 986
+VATPGRL L H T+ L + YLV+DE DR+++ P ILD++ +
Sbjct: 174 IVATPGRL-----LDHLENTKGFSLRNLKYLVMDEADRLLDMDFGP----ILDKI-LKVL 223
Query: 987 SQPRQTFVFSATLTH--------SLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSP 1038
+ R+T++FSAT++ SL+N L + SK + VS
Sbjct: 224 PRERRTYLFSATMSSKVESLQRASLQNPLRVAVSSSKFQTVS------------------ 265
Query: 1039 KIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRT-LVFCNSISSVKRLTQLL 1097
TL +S I H KD YL Y + + G++ ++FC ++ +RL+ L
Sbjct: 266 -------------TLQQSYIFIPHKHKDLYLVYLLNEFVGQSCIIFCRTVHETQRLSFFL 312
Query: 1098 TMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRT 1157
+L +PLH ++Q RL L +FR ++ IL+ATDVAARGLDIP ++ V+++ +P
Sbjct: 313 RLLGFGAIPLHGQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPGD 372
Query: 1158 SEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKK 1217
S+ +IHR GRTARA G+ + ++ ++++ +L KK LP++P ++ + ++ +
Sbjct: 373 SKTFIHRIGRTARAGKSGVAISFATQYDVEAWLRIEGALGKK--LPEYPAEKDEVMVLAE 430
Query: 1218 RIDLAKSIEYLESK 1231
R+ A+ LE K
Sbjct: 431 RVSEAQRSAILEMK 444
Score = 182 bits (462), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 158/584 (27%), Positives = 231/584 (39%), Gaps = 206/584 (35%)
Query: 73 KKKKLKRKQNPSQVEVSELSANTNDPDDQVNKTEEIQSDEPSSKKLKQKKKKKQTYTSAN 132
KK+K+ R + P Q + S+ A+++ +D T E Q EPS + K K+
Sbjct: 5 KKRKIAR-EAPQQEDHSDSEAHSSASEDAAPNTTE-QEQEPSEAPKQAPKSFKE------ 56
Query: 133 KELLEVDTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDI 192
+ E + A G+K PT IQ+ +P AL R D+
Sbjct: 57 -----------------------LGLIEQLCEACDSMGYKAPTAIQAEAIPLALQGR-DL 92
Query: 193 VGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEF 252
+G AETGSGKT AF +PIL +++K
Sbjct: 93 IGLAETGSGKTAAFALPILQALMDK----------------------------------- 117
Query: 253 VKKTRNKLYALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHI 312
+ + L+LAPTRELA Q+ G V+ +VGGM Q L K PHI
Sbjct: 118 ----PSSFFGLVLAPTRELAYQISQAFEGLGSTISVRSTVLVGGMDMVSQSIALGKKPHI 173
Query: 313 LVATPGRLWEFIQLGHFHLTE---LYKINYLVIDETDRMIESGHFPELKNILDRVTMTET 369
+VATPGRL L H T+ L + YLV+DE DR+++ P L IL +
Sbjct: 174 IVATPGRL-----LDHLENTKGFSLRNLKYLVMDEADRLLDMDFGPILDKILKVL----- 223
Query: 370 SQPRQTMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLTH--------SLKNSLNLK 421
PR+ R+T++FSAT++ SL+N L +
Sbjct: 224 --PRE--------------------------RRTYLFSATMSSKVESLQRASLQNPLRVA 255
Query: 422 KGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLY 481
SK + VS TL +S I H KD YL
Sbjct: 256 VSSSKFQTVS-------------------------------TLQQSYIFIPHKHKDLYLV 284
Query: 482 YFILQHPGRTLCEEIQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFIL 541
Y + + G++ I C+
Sbjct: 285 YLLNEFVGQSCI-------------------------------IFCR------------- 300
Query: 542 QHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLAT 601
++ +RL+ L +L +PLH ++Q RL L +FR ++ IL+AT
Sbjct: 301 -----------TVHETQRLSFFLRLLGFGAIPLHGQLSQSARLGALGKFRSRSRDILVAT 349
Query: 602 DVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTV 645
DVAARGLDIP ++ V+++ +P S+ +IHR GRTARA G+ +
Sbjct: 350 DVAARGLDIPSVDVVLNFDLPGDSKTFIHRIGRTARAGKSGVAI 393
Score = 57.0 bits (136), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 35/62 (56%)
Query: 1353 SWDALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPG 1412
S+ L+LAPTRELA Q+ G V+ +VGGM Q L K PHI+VATPG
Sbjct: 120 SFFGLVLAPTRELAYQISQAFEGLGSTISVRSTVLVGGMDMVSQSIALGKKPHIIVATPG 179
Query: 1413 AL 1414
L
Sbjct: 180 RL 181
Score = 40.8 bits (94), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 50/96 (52%), Gaps = 8/96 (8%)
Query: 1239 NWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRI 1298
++HR GRTARA G+ + ++ ++++ +L KK LP++P ++ + ++ +R+
Sbjct: 375 TFIHRIGRTARAGKSGVAISFATQYDVEAWLRIEGALGKK--LPEYPAEKDEVMVLAERV 432
Query: 1299 DLAKSIEYLESKIKKNRPDNWLEKAAK------DMD 1328
A+ LE K + + +K AK DMD
Sbjct: 433 SEAQRSAILEMKNYDEKKGSRGKKFAKGKRSREDMD 468
>sp|P38712|RRP3_YEAST ATP-dependent rRNA helicase RRP3 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RRP3 PE=1 SV=2
Length = 501
Score = 230 bits (587), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 152/468 (32%), Positives = 242/468 (51%), Gaps = 76/468 (16%)
Query: 756 DTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAET 815
+ +N ++ F +E N+ +I+A + PT IQS +P AL DI+G A+T
Sbjct: 72 ENTNEDESFESFSE---LNLVPELIQACKNLNYSKPTPIQSKAIPPALEGH-DIIGLAQT 127
Query: 816 GSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRN 875
GSGKT AF IPIL N+L + E
Sbjct: 128 GSGKTAAFAIPIL----NRLWHDQE----------------------------------- 148
Query: 876 KLYALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPG 935
YA ILAPTRELA Q++ G V+ C+VGGM+ Q R L + PHI++ATPG
Sbjct: 149 PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPG 208
Query: 936 RLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTFVF 995
RL + ++ + L K+ +LV+DE DR+++ P +LDR+ +Q R T++F
Sbjct: 209 RLMDHLE--NTKGFSLRKLKFLVMDEADRLLDMEFGP----VLDRILKIIPTQERTTYLF 262
Query: 996 SATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTE 1055
SAT+T SK K+ + ++ +P ++ K TL +
Sbjct: 263 SATMT-------------SKIDKLQRA-----------SLTNPVKCAVSNKYQTVDTLVQ 298
Query: 1056 SKILCKHDEKDSYLYYFILQHPGRTLV-FCNSISSVKRLTQLLTMLKCSPLPLHASMNQR 1114
+ ++ K++YL Y + + G+T++ F + ++ +RL+ L +L+ S LH +NQ
Sbjct: 299 TLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQN 358
Query: 1115 QRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNE 1174
QR+ +LD F+ SIL+ATDVAARGLDIP ++ V++Y +P S+ YIHR GRTARA
Sbjct: 359 QRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRS 418
Query: 1175 GLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRIDLA 1222
G ++ L+ ++ L +++ L KK LP +D++++ ++ +D A
Sbjct: 419 GKSISLVSQYDLELILRIEEVLGKK--LPKESVDKNIILTLRDSVDKA 464
Score = 184 bits (466), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 146/517 (28%), Positives = 222/517 (42%), Gaps = 156/517 (30%)
Query: 139 DTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAET 198
+ +N ++ F +E N+ +I+A + PT IQS +P AL DI+G A+T
Sbjct: 72 ENTNEDESFESFSE---LNLVPELIQACKNLNYSKPTPIQSKAIPPALEGH-DIIGLAQT 127
Query: 199 GSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRN 258
GSGKT AF IPIL N+L + E
Sbjct: 128 GSGKTAAFAIPIL----NRLWHDQE----------------------------------- 148
Query: 259 KLYALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPG 318
YA ILAPTRELA Q++ G V+ C+VGGM+ Q R L + PHI++ATPG
Sbjct: 149 PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPG 208
Query: 319 RLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIE 378
RL + ++ + L K+ +LV+DE DR+++ P
Sbjct: 209 RLMDHLE--NTKGFSLRKLKFLVMDEADRLLDMEFGP----------------------- 243
Query: 379 SGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIK 438
+LDR+ +Q R T++FSAT+T SK K+ +
Sbjct: 244 ---------VLDRILKIIPTQERTTYLFSATMT-------------SKIDKLQRA----- 276
Query: 439 RLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQD 498
++ +P ++ K TL ++ ++ K++YL Y + + G+T+
Sbjct: 277 ------SLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTM------ 324
Query: 499 LLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVK 558
I T+T ++ L CN
Sbjct: 325 ---------------IIFTRTKANAERLSG---------------------LCN------ 342
Query: 559 RLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIH 618
+L+ S LH +NQ QR+ +LD F+ SIL+ATDVAARGLDIP ++ V++
Sbjct: 343 -------LLEFSATALHGDLNQNQRMGSLDLFKAGKRSILVATDVAARGLDIPSVDIVVN 395
Query: 619 YHVPRTSEIYIHRSGRTARANNEGLTVVLIESDEIPL 655
Y +P S+ YIHR GRTARA G ++ L+ ++ L
Sbjct: 396 YDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLEL 432
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 1354 WDALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGA 1413
+ A ILAPTRELA Q++ G V+ C+VGGM+ Q R L + PHI++ATPG
Sbjct: 150 YYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGR 209
Query: 1414 L 1414
L
Sbjct: 210 L 210
Score = 37.7 bits (86), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 1239 NWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRI 1298
+++HR GRTARA G ++ L+ ++ L +++ L KK LP +D++++ ++ +
Sbjct: 404 SYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK--LPKESVDKNIILTLRDSV 461
Query: 1299 DLA 1301
D A
Sbjct: 462 DKA 464
>sp|A6QRQ7|RRP3_AJECN ATP-dependent rRNA helicase RRP3 OS=Ajellomyces capsulata (strain
NAm1 / WU24) GN=RRP3 PE=3 SV=1
Length = 485
Score = 230 bits (587), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 150/460 (32%), Positives = 238/460 (51%), Gaps = 78/460 (16%)
Query: 749 NKELLEVDTSNNEDMFVQMAEWVK-----FNIPETIIRALYQKGFKTPTKIQSMVMPSAL 803
+++L + ++E VQ E V I +++ A G+K+PT IQ+ +P AL
Sbjct: 35 DEQLTAANEQDDESPQVQREEAVTKSFKDLGIIDSLCEACEALGYKSPTPIQAESIPLAL 94
Query: 804 LARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEES 863
R D++G AETGSGKT AF +PIL ++NK ++
Sbjct: 95 QGR-DLIGLAETGSGKTAAFALPILQALMNKPQS-------------------------- 127
Query: 864 ANTTEFVKKTRNKLYALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRIL 923
L+ LILAPTRELA Q+ G V+ A +VGGM Q L
Sbjct: 128 -------------LFGLILAPTRELACQISEAFEALGSLISVRCAVIVGGMDMVSQAISL 174
Query: 924 NKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTM 983
K PHI+VATPGRL + ++ + L + YLV+DE DR+++ P ILD++ +
Sbjct: 175 GKKPHIIVATPGRLLDHLE--NTKGFSLRSLKYLVMDEADRLLDLDFGP----ILDKI-L 227
Query: 984 TETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDL 1043
+ R+T++FSAT++ ++ S++R ++ +P V +
Sbjct: 228 KVLPRERRTYLFSATMSSKVE--------------------SLQRA----SLSNPLRVSI 263
Query: 1044 TE-KIGITKTLTESKILCKHDEKDSYLYYFILQHPGRT-LVFCNSISSVKRLTQLLTMLK 1101
+ K TL +S + H KD YL Y + ++ G++ +VF +++ +RL LL L
Sbjct: 264 SSNKYQTVATLLQSYLFIPHKYKDIYLVYLLNEYAGQSAIVFTRTVNETQRLAILLRALG 323
Query: 1102 CSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIY 1161
+PLH ++Q RL L +FR ++ IL+ATDVAARGLDIP ++ V+++ +P S+ Y
Sbjct: 324 FGSIPLHGQLSQSSRLGALSKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPSDSKTY 383
Query: 1162 IHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVD 1201
IHR GRTARA G ++ +I +++++ N+L KK+D
Sbjct: 384 IHRVGRTARAGKSGHAFSIVTQYDIEVWLRIENALGKKLD 423
Score = 186 bits (472), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 149/528 (28%), Positives = 227/528 (42%), Gaps = 160/528 (30%)
Query: 132 NKELLEVDTSNNEDMFVQMAEWVK-----FNIPETIIRALYQKGFKTPTKIQSMVMPSAL 186
+++L + ++E VQ E V I +++ A G+K+PT IQ+ +P AL
Sbjct: 35 DEQLTAANEQDDESPQVQREEAVTKSFKDLGIIDSLCEACEALGYKSPTPIQAESIPLAL 94
Query: 187 LARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEES 246
R D++G AETGSGKT AF +PIL ++NK ++
Sbjct: 95 QGR-DLIGLAETGSGKTAAFALPILQALMNKPQS-------------------------- 127
Query: 247 ANTTEFVKKTRNKLYALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRIL 306
L+ LILAPTRELA Q+ G V+ A +VGGM Q L
Sbjct: 128 -------------LFGLILAPTRELACQISEAFEALGSLISVRCAVIVGGMDMVSQAISL 174
Query: 307 NKCPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTM 366
K PHI+VATPGRL + ++ + L + YLV+DE DR+++ P L IL +
Sbjct: 175 GKKPHIIVATPGRLLDHLE--NTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKVL-- 230
Query: 367 TETSQPRQTMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSK 426
PR+ R+T++FSAT++ ++
Sbjct: 231 -----PRE--------------------------RRTYLFSATMSSKVE----------- 248
Query: 427 SKKVSKGDPSIKRLQDLLNIKSPKIVDLTE-KIGITKTLTESKILCKHDEKDSYLYYFIL 485
S++R ++ +P V ++ K TL +S + H KD YL Y +
Sbjct: 249 ---------SLQR----ASLSNPLRVSISSNKYQTVATLLQSYLFIPHKYKDIYLVYLLN 295
Query: 486 QHPGRTLCEEIQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPG 545
++ G++ I T+T+ E+
Sbjct: 296 EYAGQS---------------------AIVFTRTVNET---------------------- 312
Query: 546 RTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAA 605
+RL LL L +PLH ++Q RL L +FR ++ IL+ATDVAA
Sbjct: 313 ------------QRLAILLRALGFGSIPLHGQLSQSSRLGALSKFRSRSRDILVATDVAA 360
Query: 606 RGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDEI 653
RGLDIP ++ V+++ +P S+ YIHR GRTARA G ++ +I
Sbjct: 361 RGLDIPSVDVVLNFDLPSDSKTYIHRVGRTARAGKSGHAFSIVTQYDI 408
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 35/62 (56%)
Query: 1353 SWDALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPG 1412
S LILAPTRELA Q+ G V+ A +VGGM Q L K PHI+VATPG
Sbjct: 127 SLFGLILAPTRELACQISEAFEALGSLISVRCAVIVGGMDMVSQAISLGKKPHIIVATPG 186
Query: 1413 AL 1414
L
Sbjct: 187 RL 188
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 50/102 (49%), Gaps = 14/102 (13%)
Query: 1239 NWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRI 1298
++HR GRTARA G ++ +I +++++ N+L KK+D ++ +++ + ++ R+
Sbjct: 382 TYIHRVGRTARAGKSGHAFSIVTQYDIEVWLRIENALGKKLD--EYKVEKEEVMVLSDRV 439
Query: 1299 DLAKSIEYLESK------------IKKNRPDNWLEKAAKDMD 1328
A+ E K +K RP ++ +MD
Sbjct: 440 GEAQRHAITEMKDLHEKRGSRGATLKGRRPAKGAKRGRDEMD 481
>sp|A6ZSX1|RRP3_YEAS7 ATP-dependent rRNA helicase RRP3 OS=Saccharomyces cerevisiae (strain
YJM789) GN=RRP3 PE=3 SV=1
Length = 501
Score = 229 bits (585), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 152/468 (32%), Positives = 241/468 (51%), Gaps = 76/468 (16%)
Query: 756 DTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAET 815
+ +N ++ F +E N+ +I+A + PT IQS +P AL DI+G A+T
Sbjct: 72 ENTNEDESFESFSE---LNLVPELIQACKNLNYSKPTPIQSKAIPPALEGH-DIIGLAQT 127
Query: 816 GSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRN 875
GSGKT AF IPIL N+L + E
Sbjct: 128 GSGKTAAFAIPIL----NRLWHDQE----------------------------------- 148
Query: 876 KLYALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPG 935
YA ILAPTRELA Q++ G V+ C+VGGM+ Q R L + PHI++ATPG
Sbjct: 149 PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPG 208
Query: 936 RLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTFVF 995
RL + ++ + L K+ +LV+DE DR+++ P +LDR+ +Q R T++F
Sbjct: 209 RLMDHLE--NTKGFSLRKLKFLVMDEADRLLDMEFGP----VLDRILKIIPTQERTTYLF 262
Query: 996 SATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTE 1055
SAT+T SK K+ + ++ +P ++ K TL +
Sbjct: 263 SATMT-------------SKIDKLQRA-----------SLTNPVKCAVSNKYQTVDTLVQ 298
Query: 1056 SKILCKHDEKDSYLYYFILQHPGRTLV-FCNSISSVKRLTQLLTMLKCSPLPLHASMNQR 1114
+ ++ K++YL Y + + G+T++ F + ++ +RL+ L +L+ S LH +NQ
Sbjct: 299 TLMVVPGGLKNTYLIYLLNEFIGKTMIIFTRTKANAERLSGLCNLLEFSATALHGDLNQN 358
Query: 1115 QRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNE 1174
QR+ LD F+ SIL+ATDVAARGLDIP ++ V++Y +P S+ YIHR GRTARA
Sbjct: 359 QRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVNYDIPVDSKSYIHRVGRTARAGRS 418
Query: 1175 GLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRIDLA 1222
G ++ L+ ++ L +++ L KK LP +D++++ ++ +D A
Sbjct: 419 GKSISLVSQYDLELILRIEEVLGKK--LPKESVDKNIILTLRDSVDKA 464
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 146/517 (28%), Positives = 221/517 (42%), Gaps = 156/517 (30%)
Query: 139 DTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAET 198
+ +N ++ F +E N+ +I+A + PT IQS +P AL DI+G A+T
Sbjct: 72 ENTNEDESFESFSE---LNLVPELIQACKNLNYSKPTPIQSKAIPPALEGH-DIIGLAQT 127
Query: 199 GSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRN 258
GSGKT AF IPIL N+L + E
Sbjct: 128 GSGKTAAFAIPIL----NRLWHDQE----------------------------------- 148
Query: 259 KLYALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPG 318
YA ILAPTRELA Q++ G V+ C+VGGM+ Q R L + PHI++ATPG
Sbjct: 149 PYYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPG 208
Query: 319 RLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIE 378
RL + ++ + L K+ +LV+DE DR+++ P
Sbjct: 209 RLMDHLE--NTKGFSLRKLKFLVMDEADRLLDMEFGP----------------------- 243
Query: 379 SGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIK 438
+LDR+ +Q R T++FSAT+T SK K+ +
Sbjct: 244 ---------VLDRILKIIPTQERTTYLFSATMT-------------SKIDKLQRA----- 276
Query: 439 RLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQD 498
++ +P ++ K TL ++ ++ K++YL Y + + G+T+
Sbjct: 277 ------SLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTYLIYLLNEFIGKTM------ 324
Query: 499 LLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVK 558
I T+T ++ L CN
Sbjct: 325 ---------------IIFTRTKANAERLSG---------------------LCN------ 342
Query: 559 RLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIH 618
+L+ S LH +NQ QR+ LD F+ SIL+ATDVAARGLDIP ++ V++
Sbjct: 343 -------LLEFSATALHGDLNQNQRMGALDLFKAGKRSILVATDVAARGLDIPSVDIVVN 395
Query: 619 YHVPRTSEIYIHRSGRTARANNEGLTVVLIESDEIPL 655
Y +P S+ YIHR GRTARA G ++ L+ ++ L
Sbjct: 396 YDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLEL 432
Score = 62.0 bits (149), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 1354 WDALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGA 1413
+ A ILAPTRELA Q++ G V+ C+VGGM+ Q R L + PHI++ATPG
Sbjct: 150 YYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMNMMDQARDLMRKPHIIIATPGR 209
Query: 1414 L 1414
L
Sbjct: 210 L 210
Score = 37.7 bits (86), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 1239 NWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRI 1298
+++HR GRTARA G ++ L+ ++ L +++ L KK LP +D++++ ++ +
Sbjct: 404 SYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK--LPKESVDKNIILTLRDSV 461
Query: 1299 DLA 1301
D A
Sbjct: 462 DKA 464
>sp|Q75EW9|RRP3_ASHGO ATP-dependent rRNA helicase RRP3 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RRP3
PE=3 SV=2
Length = 486
Score = 228 bits (581), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 159/480 (33%), Positives = 244/480 (50%), Gaps = 75/480 (15%)
Query: 775 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 834
+PE +I A F PT IQS +P AL KDI+G A+TGSGKT AF IPIL N+
Sbjct: 74 VPE-LIEACDNLNFTKPTPIQSKAIPPALQG-KDIIGLAQTGSGKTAAFAIPIL----NR 127
Query: 835 LENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQN 894
L + + YA ILAPTRELA Q++
Sbjct: 128 LWH-----------------------------------DQQPYYACILAPTRELAQQIKE 152
Query: 895 HILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTELYKI 954
G V+ C+VGGM+ Q R L + PHI++ATPGRL + ++ + L K+
Sbjct: 153 TFDSLGSLMGVRTTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLE--NTKGFALRKL 210
Query: 955 NYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQS 1014
+LV+DE DR+++ P +LDR+ ++ R T++FSAT+T S
Sbjct: 211 QFLVMDEADRLLDMEFGP----VLDRILKNIPTKGRTTYLFSATMT-------------S 253
Query: 1015 KSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFIL 1074
K K+ + ++ +P ++ K TL ++ I+ K+++L Y +
Sbjct: 254 KIDKLQRA-----------SLTNPVKCAVSNKYQTVDTLVQTLIVVPGGLKNTFLIYLLN 302
Query: 1075 QHPGRT-LVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLA 1133
+ G+T +VF + ++ +R++ L +L+ S LH +NQ QR LD F+ SIL+A
Sbjct: 303 EFIGKTTIVFTRTKANAERISGLCNLLEFSATALHGDLNQNQRTGALDLFKAGKKSILVA 362
Query: 1134 TDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMF 1193
TDVAARGLDIP ++ VI+Y +P S+ YIHR GRTARA G ++ L+ ++ L +++
Sbjct: 363 TDVAARGLDIPSVDLVINYDIPVDSKSYIHRVGRTARAGRSGKSVSLVSQYDLELILRIE 422
Query: 1194 NSLEKKVDLPDFPIDESVLSLIKKRIDLAKSIEYLE-SKIKKNRPDNWLHRSGRTARANN 1252
L KK LP +D+S++ ++ +D A +E ++ K + R RTA N
Sbjct: 423 EVLGKK--LPKENVDKSIVLSLRDSVDKANGEVIMELNRRNKEKQTRGKGRRSRTATREN 480
Score = 183 bits (464), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 152/498 (30%), Positives = 218/498 (43%), Gaps = 154/498 (30%)
Query: 158 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 217
+PE +I A F PT IQS +P AL KDI+G A+TGSGKT AF IPIL N+
Sbjct: 74 VPE-LIEACDNLNFTKPTPIQSKAIPPALQG-KDIIGLAQTGSGKTAAFAIPIL----NR 127
Query: 218 LENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQN 277
L + + YA ILAPTRELA Q++
Sbjct: 128 LWH-----------------------------------DQQPYYACILAPTRELAQQIKE 152
Query: 278 HILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTELYKI 337
G V+ C+VGGM+ Q R L + PHI++ATPGRL + ++ + L K+
Sbjct: 153 TFDSLGSLMGVRTTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLE--NTKGFALRKL 210
Query: 338 NYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNILDRVTMTET 397
+LV+DE DR+++ P +LDR+ LKNI
Sbjct: 211 QFLVMDEADRLLDMEFGP----VLDRI--------------------LKNI--------P 238
Query: 398 SQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEK 457
++ R T++FSAT+T SK K+ + ++ +P ++ K
Sbjct: 239 TKGRTTYLFSATMT-------------SKIDKLQRA-----------SLTNPVKCAVSNK 274
Query: 458 IGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDLLNIKSPKIVDLTEKIGIT 517
TL ++ I+ K+++L Y + + G+T T
Sbjct: 275 YQTVDTLVQTLIVVPGGLKNTFLIYLLNEFIGKT-------------------------T 309
Query: 518 KTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHAS 577
T +K + E+ S L CN +L+ S LH
Sbjct: 310 IVFTRTK---ANAERISGL--------------CN-------------LLEFSATALHGD 339
Query: 578 MNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTAR 637
+NQ QR LD F+ SIL+ATDVAARGLDIP ++ VI+Y +P S+ YIHR GRTAR
Sbjct: 340 LNQNQRTGALDLFKAGKKSILVATDVAARGLDIPSVDLVINYDIPVDSKSYIHRVGRTAR 399
Query: 638 ANNEGLTVVLIESDEIPL 655
A G +V L+ ++ L
Sbjct: 400 AGRSGKSVSLVSQYDLEL 417
Score = 62.4 bits (150), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 38/61 (62%)
Query: 1354 WDALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGA 1413
+ A ILAPTRELA Q++ G V+ C+VGGM+ Q R L + PHI++ATPG
Sbjct: 135 YYACILAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMMDQARDLMRKPHIIIATPGR 194
Query: 1414 L 1414
L
Sbjct: 195 L 195
Score = 37.7 bits (86), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 1239 NWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRI 1298
+++HR GRTARA G ++ L+ ++ L +++ L KK LP +D+S++ ++ +
Sbjct: 389 SYIHRVGRTARAGRSGKSVSLVSQYDLELILRIEEVLGKK--LPKENVDKSIVLSLRDSV 446
Query: 1299 DLA 1301
D A
Sbjct: 447 DKA 449
>sp|Q4IFI0|RRP3_GIBZE ATP-dependent rRNA helicase RRP3 OS=Gibberella zeae (strain PH-1 /
ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=RRP3 PE=3 SV=1
Length = 486
Score = 228 bits (580), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 145/448 (32%), Positives = 230/448 (51%), Gaps = 79/448 (17%)
Query: 788 FKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSG 847
+K PT IQ +P AL R DI+G AETGSGKT AF +P+L +++K +
Sbjct: 80 YKYPTPIQEKSIPVALQGR-DIIGLAETGSGKTAAFALPVLQALLDKPQ----------- 127
Query: 848 LEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQNHILDAGKYTPVKV 907
L+ L+LAPTRELA Q+ G ++
Sbjct: 128 ----------------------------PLFGLVLAPTRELATQIGQAFEALGSLISLRC 159
Query: 908 ACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTE---LYKINYLVIDETDR 964
A +VGG+ Q L K PHI+VATPGRL + H T+ L + YL++DE DR
Sbjct: 160 AVIVGGLDMVPQAIALGKKPHIVVATPGRLVD-----HLEKTKGFSLRTLKYLIMDEADR 214
Query: 965 MIESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDP 1024
+++ P + IL V + R+T++FSAT++ +++ ++ S DP
Sbjct: 215 LLDMDFGPSIDKILKFV-----PRERRTYLFSATISSKIESL----------QRASLRDP 259
Query: 1025 SIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGR-TLVF 1083
K+ + K TL ++ + H +KD +L Y I +H G+ T+VF
Sbjct: 260 V-------------KVSISSNKYQTVSTLLQNYLFIPHPQKDVHLIYLINEHAGQSTIVF 306
Query: 1084 CNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDI 1143
++ +R++ LL L +PLH ++Q RL L++FR IL+ATDVAARGLDI
Sbjct: 307 TRTVWETQRVSILLRTLGFGAIPLHGQLSQSSRLGALNKFRSGTRDILVATDVAARGLDI 366
Query: 1144 PGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLP 1203
P ++ V++Y +P+ S+ YIHR GRTARA G+ + L+ ++ +Y+++ +L KK L
Sbjct: 367 PSVDVVLNYDLPQDSKTYIHRVGRTARAGKSGVAISLVTQYDLEIYLRIEAALGKK--LA 424
Query: 1204 DFPIDESVLSLIKKRIDLAKSIEYLESK 1231
++P ++ + + R++ A+ I +E K
Sbjct: 425 EYPTEKEEVMAFQSRVEEAQRIARIEMK 452
Score = 180 bits (457), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 137/481 (28%), Positives = 206/481 (42%), Gaps = 159/481 (33%)
Query: 171 FKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSG 230
+K PT IQ +P AL R DI+G AETGSGKT AF +P+L +++K +
Sbjct: 80 YKYPTPIQEKSIPVALQGR-DIIGLAETGSGKTAAFALPVLQALLDKPQ----------- 127
Query: 231 LEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQNHILDAGKYTPVKV 290
L+ L+LAPTRELA Q+ G ++
Sbjct: 128 ----------------------------PLFGLVLAPTRELATQIGQAFEALGSLISLRC 159
Query: 291 ACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTE---LYKINYLVIDETDR 347
A +VGG+ Q L K PHI+VATPGRL + H T+ L + YL++DE DR
Sbjct: 160 AVIVGGLDMVPQAIALGKKPHIVVATPGRLVD-----HLEKTKGFSLRTLKYLIMDEADR 214
Query: 348 MIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNILDRVTMTETSQPRQTFVFS 407
+++ P + IL V PR+ R+T++FS
Sbjct: 215 LLDMDFGPSIDKILKFV-------PRE--------------------------RRTYLFS 241
Query: 408 ATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTES 467
AT++ +++ ++ S DP K+ + K TL ++
Sbjct: 242 ATISSKIES----------LQRASLRDPV-------------KVSISSNKYQTVSTLLQN 278
Query: 468 KILCKHDEKDSYLYYFILQHPGRTLCEEIQDLLNIKSPKIVDLTEKIGITKTLTESKILC 527
+ H +KD +L Y I +H G++ I T+T+ E+
Sbjct: 279 YLFIPHPQKDVHLIYLINEHAGQS---------------------TIVFTRTVWET---- 313
Query: 528 KHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNL 587
+R++ LL L +PLH ++Q RL L
Sbjct: 314 ------------------------------QRVSILLRTLGFGAIPLHGQLSQSSRLGAL 343
Query: 588 DRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVL 647
++FR IL+ATDVAARGLDIP ++ V++Y +P+ S+ YIHR GRTARA G+ + L
Sbjct: 344 NKFRSGTRDILVATDVAARGLDIPSVDVVLNYDLPQDSKTYIHRVGRTARAGKSGVAISL 403
Query: 648 I 648
+
Sbjct: 404 V 404
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%)
Query: 1356 ALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGAL 1414
L+LAPTRELA Q+ G ++ A +VGG+ Q L K PHI+VATPG L
Sbjct: 131 GLVLAPTRELATQIGQAFEALGSLISLRCAVIVGGLDMVPQAIALGKKPHIVVATPGRL 189
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 43/72 (59%), Gaps = 2/72 (2%)
Query: 1239 NWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRI 1298
++HR GRTARA G+ + L+ ++ +Y+++ +L KK L ++P ++ + + R+
Sbjct: 383 TYIHRVGRTARAGKSGVAISLVTQYDLEIYLRIEAALGKK--LAEYPTEKEEVMAFQSRV 440
Query: 1299 DLAKSIEYLESK 1310
+ A+ I +E K
Sbjct: 441 EEAQRIARIEMK 452
>sp|Q6CT85|RRP3_KLULA ATP-dependent rRNA helicase RRP3 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=RRP3 PE=3 SV=1
Length = 487
Score = 228 bits (580), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 158/480 (32%), Positives = 243/480 (50%), Gaps = 75/480 (15%)
Query: 775 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 834
+PE +I A + PT IQS +P AL DI+G A+TGSGKT AF IPIL N+
Sbjct: 75 VPE-LIEACKNLNYNKPTPIQSKAIPPALKG-SDIIGLAQTGSGKTAAFAIPIL----NQ 128
Query: 835 LENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQN 894
L + + YA ILAPTRELA Q++
Sbjct: 129 LWHDQQP-----------------------------------YYACILAPTRELAQQIKE 153
Query: 895 HILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTELYKI 954
G V+ C+VGGMS Q R L + PHI++ATPGRL + ++ + L K+
Sbjct: 154 TFDSLGSLMGVRSTCIVGGMSMMDQARDLMRKPHIIIATPGRLMDHLE--NTKGFNLRKL 211
Query: 955 NYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQS 1014
YLV+DE DR+++ P +LDR+ +Q R T++FSAT+T S
Sbjct: 212 KYLVMDEADRLLDMEFGP----VLDRILNIIPTQGRTTYLFSATMT-------------S 254
Query: 1015 KSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFIL 1074
K K+ + ++ +P ++ K TL ++ ++ K+++L Y +
Sbjct: 255 KIDKLQRA-----------SLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTFLIYLLN 303
Query: 1075 QHPGR-TLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLA 1133
+ G+ T+VF + ++ +R++ L +L+ S LH +NQ QR LD F+ SIL+A
Sbjct: 304 EFIGKSTIVFTRTKANAERISNLCNLLEFSATALHGDLNQNQRTGALDLFKAGKRSILVA 363
Query: 1134 TDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMF 1193
TDVAARGLDIP ++ VI+Y +P S+ YIHR GRTARA G ++ L+ ++ L +++
Sbjct: 364 TDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIE 423
Query: 1194 NSLEKKVDLPDFPIDESVLSLIKKRIDLAKSIEYLE-SKIKKNRPDNWLHRSGRTARANN 1252
+ L KK LP +D+ + ++ +D A +E ++ K + R GR A +N
Sbjct: 424 DVLGKK--LPKENVDKDAILALRDSVDKANGEVVMELNRRNKEKQARGKGRRGRMATRDN 481
Score = 178 bits (451), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 146/498 (29%), Positives = 213/498 (42%), Gaps = 154/498 (30%)
Query: 158 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 217
+PE +I A + PT IQS +P AL DI+G A+TGSGKT AF IPIL N+
Sbjct: 75 VPE-LIEACKNLNYNKPTPIQSKAIPPALKG-SDIIGLAQTGSGKTAAFAIPIL----NQ 128
Query: 218 LENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQN 277
L + + YA ILAPTRELA Q++
Sbjct: 129 LWHDQQP-----------------------------------YYACILAPTRELAQQIKE 153
Query: 278 HILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTELYKI 337
G V+ C+VGGMS Q R L + PHI++ATPGRL + ++ + L K+
Sbjct: 154 TFDSLGSLMGVRSTCIVGGMSMMDQARDLMRKPHIIIATPGRLMDHLE--NTKGFNLRKL 211
Query: 338 NYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNILDRVTMTET 397
YLV+DE DR+++ P +LDR+
Sbjct: 212 KYLVMDEADRLLDMEFGP--------------------------------VLDRILNIIP 239
Query: 398 SQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEK 457
+Q R T++FSAT+T SK K+ + ++ +P ++ K
Sbjct: 240 TQGRTTYLFSATMT-------------SKIDKLQRA-----------SLTNPVKCAVSNK 275
Query: 458 IGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDLLNIKSPKIVDLTEKIGIT 517
TL ++ ++ K+++L Y + + G++ T
Sbjct: 276 YQTVDTLVQTLMVVPGGLKNTFLIYLLNEFIGKS-------------------------T 310
Query: 518 KTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHAS 577
T +K + E+ S L CN +L+ S LH
Sbjct: 311 IVFTRTK---ANAERISNL--------------CN-------------LLEFSATALHGD 340
Query: 578 MNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTAR 637
+NQ QR LD F+ SIL+ATDVAARGLDIP ++ VI+Y +P S+ YIHR GRTAR
Sbjct: 341 LNQNQRTGALDLFKAGKRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTAR 400
Query: 638 ANNEGLTVVLIESDEIPL 655
A G ++ L+ ++ L
Sbjct: 401 AGRSGKSISLVSQYDLEL 418
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 38/61 (62%)
Query: 1354 WDALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGA 1413
+ A ILAPTRELA Q++ G V+ C+VGGMS Q R L + PHI++ATPG
Sbjct: 136 YYACILAPTRELAQQIKETFDSLGSLMGVRSTCIVGGMSMMDQARDLMRKPHIIIATPGR 195
Query: 1414 L 1414
L
Sbjct: 196 L 196
Score = 36.6 bits (83), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 1239 NWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRI 1298
+++HR GRTARA G ++ L+ ++ L +++ + L KK LP +D+ + ++ +
Sbjct: 390 SYIHRVGRTARAGRSGKSISLVSQYDLELILRIEDVLGKK--LPKENVDKDAILALRDSV 447
Query: 1299 DLA 1301
D A
Sbjct: 448 DKA 450
>sp|A7TS37|RRP3_VANPO ATP-dependent rRNA helicase RRP3 OS=Vanderwaltozyma polyspora (strain
ATCC 22028 / DSM 70294) GN=RRP3 PE=3 SV=1
Length = 506
Score = 227 bits (578), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 158/476 (33%), Positives = 243/476 (51%), Gaps = 75/476 (15%)
Query: 775 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 834
+PE +I A F PT IQ+ +P AL DI+G A+TGSGKT AF IPIL N+
Sbjct: 94 VPE-LIEACKNLNFAKPTPIQARSIPPALQGH-DIIGLAQTGSGKTAAFAIPIL----NR 147
Query: 835 LENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQN 894
L + + YA ILAPTRELA Q++
Sbjct: 148 LWHDQQP-----------------------------------YYACILAPTRELAQQIKE 172
Query: 895 HILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTELYKI 954
G V+ AC+VGGM+ Q R L + PHI++ATPGRL + ++ + L K+
Sbjct: 173 TFDSLGSLMGVRSACIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLE--NTRGFSLRKL 230
Query: 955 NYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQS 1014
+LV+DE DR+++ P +LDR+ +Q R T++FSAT+T S
Sbjct: 231 KFLVMDEADRLLDMEFGP----VLDRILKIIPTQGRTTYLFSATMT-------------S 273
Query: 1015 KSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFIL 1074
K K+ + ++ +P ++ K TL ++ I+ K++YL Y +
Sbjct: 274 KIDKLQRA-----------SLTNPVKCAVSNKYQTVDTLVQTLIVVPGGLKNTYLIYLMN 322
Query: 1075 QHPGRTL-VFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLA 1133
+ G+T+ VF + ++ +R+T L +L+ S LH +NQ QR +LD F+ SIL+A
Sbjct: 323 EFIGKTIIVFTRTKANAERITTLANLLEFSATALHGDLNQNQRTGSLDLFKAGRRSILVA 382
Query: 1134 TDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMF 1193
TDVAARGLDIP ++ VI+Y +P S+ YIHR GRTARA G ++ L+ ++ L +++
Sbjct: 383 TDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLELILRIE 442
Query: 1194 NSLEKKVDLPDFPIDESVLSLIKKRIDLAKSIEYLE-SKIKKNRPDNWLHRSGRTA 1248
+ L KK LP +++ + ++ +D A +E ++ K + R GR A
Sbjct: 443 DVLGKK--LPKENVNKDAILTLRDSVDKANGEVVMELNRRNKEKIARGKGRRGRMA 496
Score = 118 bits (296), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 145/335 (43%), Gaps = 99/335 (29%)
Query: 158 IPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNK 217
+PE +I A F PT IQ+ +P AL DI+G A+TGSGKT AF IPIL N+
Sbjct: 94 VPE-LIEACKNLNFAKPTPIQARSIPPALQGH-DIIGLAQTGSGKTAAFAIPIL----NR 147
Query: 218 LENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQN 277
L + + YA ILAPTRELA Q++
Sbjct: 148 LWHDQQP-----------------------------------YYACILAPTRELAQQIKE 172
Query: 278 HILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTELYKI 337
G V+ AC+VGGM+ Q R L + PHI++ATPGRL + ++ + L K+
Sbjct: 173 TFDSLGSLMGVRSACIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLE--NTRGFSLRKL 230
Query: 338 NYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNILDRVTMTET 397
+LV+DE DR+++ P +LDR+
Sbjct: 231 KFLVMDEADRLLDMEFGP--------------------------------VLDRILKIIP 258
Query: 398 SQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEK 457
+Q R T++FSAT+T SK K+ + ++ +P ++ K
Sbjct: 259 TQGRTTYLFSATMT-------------SKIDKLQRA-----------SLTNPVKCAVSNK 294
Query: 458 IGITKTLTESKILCKHDEKDSYLYYFILQHPGRTL 492
TL ++ I+ K++YL Y + + G+T+
Sbjct: 295 YQTVDTLVQTLIVVPGGLKNTYLIYLMNEFIGKTI 329
Score = 114 bits (286), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 60/156 (38%), Positives = 95/156 (60%), Gaps = 1/156 (0%)
Query: 501 NIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTL-VFCNSISSVKR 559
++ +P ++ K TL ++ I+ K++YL Y + + G+T+ VF + ++ +R
Sbjct: 282 SLTNPVKCAVSNKYQTVDTLVQTLIVVPGGLKNTYLIYLMNEFIGKTIIVFTRTKANAER 341
Query: 560 LTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHY 619
+T L +L+ S LH +NQ QR +LD F+ SIL+ATDVAARGLDIP ++ VI+Y
Sbjct: 342 ITTLANLLEFSATALHGDLNQNQRTGSLDLFKAGRRSILVATDVAARGLDIPSVDIVINY 401
Query: 620 HVPRTSEIYIHRSGRTARANNEGLTVVLIESDEIPL 655
+P S+ YIHR GRTARA G ++ L+ ++ L
Sbjct: 402 DIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLEL 437
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%)
Query: 1354 WDALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGA 1413
+ A ILAPTRELA Q++ G V+ AC+VGGM+ Q R L + PHI++ATPG
Sbjct: 155 YYACILAPTRELAQQIKETFDSLGSLMGVRSACIVGGMNMMDQARDLMRKPHIIIATPGR 214
Query: 1414 L 1414
L
Sbjct: 215 L 215
Score = 35.8 bits (81), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 8/96 (8%)
Query: 1239 NWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRI 1298
+++HR GRTARA G ++ L+ ++ L +++ + L KK LP +++ + ++ +
Sbjct: 409 SYIHRVGRTARAGRSGKSISLVSQYDLELILRIEDVLGKK--LPKENVNKDAILTLRDSV 466
Query: 1299 DLAKSIEYLE------SKIKKNRPDNWLEKAAKDMD 1328
D A +E KI + + A DMD
Sbjct: 467 DKANGEVVMELNRRNKEKIARGKGRRGRMAARDDMD 502
>sp|A5DQF1|RRP3_PICGU ATP-dependent rRNA helicase RRP3 OS=Meyerozyma guilliermondii (strain
ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC 10279 /
NRRL Y-324) GN=RRP3 PE=3 SV=2
Length = 475
Score = 226 bits (577), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 166/517 (32%), Positives = 261/517 (50%), Gaps = 85/517 (16%)
Query: 733 KKLKQKKKKKQTYTSANKELLEVDTSNNEDMFV--QMAEWVKFNIPETIIRALYQKGFKT 790
KK K+KK+ T +E++E + ++D+ Q + + N+ ++ A+ + +
Sbjct: 27 KKNALKQKKQAPVTEKPEEIVETTSEASQDVNSEQQFHTFSELNLVPELMEAIEKLKYTK 86
Query: 791 PTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEE 850
PT IQS +P AL KDI+G A+TGSGKT AF IPIL +
Sbjct: 87 PTPIQSGAIPHALEG-KDIIGLAQTGSGKTAAFAIPILQSLW------------------ 127
Query: 851 EAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQNHILDAGKYTPVKVACV 910
+ + YAL+LAPTRELA Q++ G V+ C+
Sbjct: 128 ---------------------EAQRPYYALVLAPTRELAYQIKETFDALGSGMGVRSVCI 166
Query: 911 VGGMSTEKQLRILNKCPHILVATPGRLWEFIQ-LGHFHLTELYKINYLVIDETDRMIESG 969
VGGM Q R L + PHILVATPGR+ + ++ F L L YLV+DE DR+++
Sbjct: 167 VGGMDMMDQARDLMRKPHILVATPGRIMDHLENTKGFSLKSL---QYLVMDEADRLLDMD 223
Query: 970 HFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRL 1029
P L IL +V T+ R T++FSAT+T+ I +L
Sbjct: 224 FGPALDKIL-KVIPTK----RTTYLFSATMTNK-----------------------IAKL 255
Query: 1030 QDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTL-VFCNSIS 1088
Q ++ P V ++ K L +S +L K+++L + + + G+++ VF + +
Sbjct: 256 QRA-SLHEPVKVAVSNKYQTADNLVQSMMLVSDGYKNTFLIHLLNEFMGKSIIVFTRTCA 314
Query: 1089 SVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEH 1148
+R T L +L S +PLH + Q QRL +L++F+ +IL+ATDVAARGLDIP ++
Sbjct: 315 HTQRSTLLARILGFSAVPLHGQLTQSQRLGSLNKFKSGKANILIATDVAARGLDIPSVDV 374
Query: 1149 VIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDL-PDFPI 1207
VI+Y +P S+ YIHR GRTARA G ++ L+ ++ +Y+++ + L K+ P P
Sbjct: 375 VINYDIPTDSKAYIHRVGRTARAGKSGKSISLVTQYDLEMYLRIESVLGFKLPKDPSPPR 434
Query: 1208 DESVLSLIKKRIDLA------KSIEYLESKIKKNRPD 1238
D VL+ + +D A ++ ++ E + KK R D
Sbjct: 435 D--VLNALHVHVDRASAEAIKQTKDFHEKRTKKKRDD 469
Score = 188 bits (477), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 154/536 (28%), Positives = 232/536 (43%), Gaps = 158/536 (29%)
Query: 116 KKLKQKKKKKQTYTSANKELLEVDTSNNEDMFV--QMAEWVKFNIPETIIRALYQKGFKT 173
KK K+KK+ T +E++E + ++D+ Q + + N+ ++ A+ + +
Sbjct: 27 KKNALKQKKQAPVTEKPEEIVETTSEASQDVNSEQQFHTFSELNLVPELMEAIEKLKYTK 86
Query: 174 PTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEE 233
PT IQS +P AL KDI+G A+TGSGKT AF IPIL +
Sbjct: 87 PTPIQSGAIPHALEG-KDIIGLAQTGSGKTAAFAIPILQSLW------------------ 127
Query: 234 EAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQVQNHILDAGKYTPVKVACV 293
+ + YAL+LAPTRELA Q++ G V+ C+
Sbjct: 128 ---------------------EAQRPYYALVLAPTRELAYQIKETFDALGSGMGVRSVCI 166
Query: 294 VGGMSTEKQLRILNKCPHILVATPGRLWEFIQ-LGHFHLTELYKINYLVIDETDRMIESG 352
VGGM Q R L + PHILVATPGR+ + ++ F L L YLV+DE DR+++
Sbjct: 167 VGGMDMMDQARDLMRKPHILVATPGRIMDHLENTKGFSLKSL---QYLVMDEADRLLDMD 223
Query: 353 HFPELKNILDRVTMTETSQPRQTMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLTH 412
P L IL +V T+ R T++FSAT+T+
Sbjct: 224 FGPALDKIL-KVIPTK--------------------------------RTTYLFSATMTN 250
Query: 413 SLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCK 472
I +LQ ++ P V ++ K L +S +L
Sbjct: 251 -----------------------KIAKLQR-ASLHEPVKVAVSNKYQTADNLVQSMMLVS 286
Query: 473 HDEKDSYLYYFILQHPGRTLCEEIQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEK 532
K+++L + + + G+++ I T+T C H
Sbjct: 287 DGYKNTFLIHLLNEFMGKSI---------------------IVFTRT-------CAH--- 315
Query: 533 DSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRD 592
+R T L +L S +PLH + Q QRL +L++F+
Sbjct: 316 ------------------------TQRSTLLARILGFSAVPLHGQLTQSQRLGSLNKFKS 351
Query: 593 QNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLI 648
+IL+ATDVAARGLDIP ++ VI+Y +P S+ YIHR GRTARA G ++ L+
Sbjct: 352 GKANILIATDVAARGLDIPSVDVVINYDIPTDSKAYIHRVGRTARAGKSGKSISLV 407
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 15/134 (11%)
Query: 1354 WDALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGA 1413
+ AL+LAPTRELA Q++ G V+ C+VGGM Q R L + PHILVATPG
Sbjct: 133 YYALVLAPTRELAYQIKETFDALGSGMGVRSVCIVGGMDMMDQARDLMRKPHILVATPGR 192
Query: 1414 L-----SLKRIDLAKSIEYLESKIKKNRPDNWLEKAAKDMDIIIDDENLIQPKANSRENA 1468
+ + K L KS++YL + D L DMD + +++ R
Sbjct: 193 IMDHLENTKGFSL-KSLQYLV----MDEADRLL-----DMDFGPALDKILKVIPTKRTTY 242
Query: 1469 LMSKALVSKRKELQ 1482
L S + +K +LQ
Sbjct: 243 LFSATMTNKIAKLQ 256
Score = 35.4 bits (80), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 1240 WLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDL-PDFPIDESVLSLIKKRI 1298
++HR GRTARA G ++ L+ ++ +Y+++ + L K+ P P D VL+ + +
Sbjct: 387 YIHRVGRTARAGKSGKSISLVTQYDLEMYLRIESVLGFKLPKDPSPPRD--VLNALHVHV 444
Query: 1299 DLA------KSIEYLESKIKKNRPD 1317
D A ++ ++ E + KK R D
Sbjct: 445 DRASAEAIKQTKDFHEKRTKKKRDD 469
>sp|Q4WJE9|RRP3_ASPFU ATP-dependent rRNA helicase rrp3 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=rrp3 PE=3
SV=1
Length = 472
Score = 226 bits (577), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 153/493 (31%), Positives = 238/493 (48%), Gaps = 95/493 (19%)
Query: 773 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 832
I + + A G+K PT IQ+ +P AL R D++G AETGSGKT AF +PIL +
Sbjct: 57 LGIIDQLCEACETMGYKAPTPIQAESIPLALQGR-DLIGLAETGSGKTAAFALPILQAL- 114
Query: 833 NKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQV 892
+ENP + LILAPTRELA Q+
Sbjct: 115 --MENP------------------------------------QSFFGLILAPTRELAFQI 136
Query: 893 QNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTE-- 950
G V+ A +VGGM Q L K PHI+VATPGRL L H T+
Sbjct: 137 SKSFESLGSTINVRCAVIVGGMDMVSQSIALGKKPHIIVATPGRL-----LDHLENTKGF 191
Query: 951 -LYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLTH-------- 1001
L + YLV+DE DR+++ P L IL + + R+TF+FSAT++
Sbjct: 192 SLRTLKYLVMDEADRLLDMDFGPLLDKILKVL-----PRERRTFLFSATMSSKVESLQRA 246
Query: 1002 SLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCK 1061
SL N L + +K + VS TL +S +
Sbjct: 247 SLSNPLRVSVSSNKYQTVS-------------------------------TLLQSYLFLP 275
Query: 1062 HDEKDSYLYYFILQHPGR-TLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNL 1120
H KD YL Y + + G+ T++F ++ +R++ LL L +PLH ++Q RL L
Sbjct: 276 HKHKDIYLVYLLNEFVGQSTIIFTRTVHETQRISFLLRSLGFGAIPLHGQLSQSARLGAL 335
Query: 1121 DRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVL 1180
+FR ++ IL+ATDVAARGLDIP ++ V+++ +P S+ Y+HR GRTARA G+ +
Sbjct: 336 GKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTDSKTYVHRVGRTARAGKSGVAISF 395
Query: 1181 IESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRIDLAKSIEYLESKIKKNRPDNW 1240
+ ++ +++++ +L KK L ++ +++ + ++ +R+ A+ +E K +
Sbjct: 396 VTQYDVEIWLRIEGALGKK--LKEYELEKDEVMVLAERVGEAQRQAIMEMKNFDEKRGTK 453
Query: 1241 LHRSGRTARANNE 1253
+ G+ R+ +E
Sbjct: 454 AKKFGKGKRSRDE 466
Score = 184 bits (467), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 146/504 (28%), Positives = 206/504 (40%), Gaps = 175/504 (34%)
Query: 156 FNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILTGIV 215
I + + A G+K PT IQ+ +P AL R D++G AETGSGKT AF +PIL +
Sbjct: 57 LGIIDQLCEACETMGYKAPTPIQAESIPLALQGR-DLIGLAETGSGKTAAFALPILQAL- 114
Query: 216 NKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELAIQV 275
+ENP + LILAPTRELA Q+
Sbjct: 115 --MENP------------------------------------QSFFGLILAPTRELAFQI 136
Query: 276 QNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLTE-- 333
G V+ A +VGGM Q L K PHI+VATPGRL L H T+
Sbjct: 137 SKSFESLGSTINVRCAVIVGGMDMVSQSIALGKKPHIIVATPGRL-----LDHLENTKGF 191
Query: 334 -LYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNILDRV 392
L + YLV+DE DR+++ P L IL + PR+
Sbjct: 192 SLRTLKYLVMDEADRLLDMDFGPLLDKILKVL-------PRE------------------ 226
Query: 393 TMTETSQPRQTFVFSATLTH--------SLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLL 444
R+TF+FSAT++ SL N L + +K + VS
Sbjct: 227 --------RRTFLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVS------------- 265
Query: 445 NIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDLLNIKS 504
TL +S + H KD YL Y + + G++
Sbjct: 266 ------------------TLLQSYLFLPHKHKDIYLVYLLNEFVGQS------------- 294
Query: 505 PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLL 564
I T+T+ E+ +R++ LL
Sbjct: 295 --------TIIFTRTVHET----------------------------------QRISFLL 312
Query: 565 TMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRT 624
L +PLH ++Q RL L +FR ++ IL+ATDVAARGLDIP ++ V+++ +P
Sbjct: 313 RSLGFGAIPLHGQLSQSARLGALGKFRSRSRDILVATDVAARGLDIPSVDVVLNFDLPTD 372
Query: 625 SEIYIHRSGRTARANNEGLTVVLI 648
S+ Y+HR GRTARA G+ + +
Sbjct: 373 SKTYVHRVGRTARAGKSGVAISFV 396
Score = 61.6 bits (148), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 36/62 (58%)
Query: 1353 SWDALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPG 1412
S+ LILAPTRELA Q+ G V+ A +VGGM Q L K PHI+VATPG
Sbjct: 120 SFFGLILAPTRELAFQISKSFESLGSTINVRCAVIVGGMDMVSQSIALGKKPHIIVATPG 179
Query: 1413 AL 1414
L
Sbjct: 180 RL 181
Score = 36.6 bits (83), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/72 (23%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 1239 NWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRI 1298
++HR GRTARA G+ + + ++ +++++ +L KK L ++ +++ + ++ +R+
Sbjct: 375 TYVHRVGRTARAGKSGVAISFVTQYDVEIWLRIEGALGKK--LKEYELEKDEVMVLAERV 432
Query: 1299 DLAKSIEYLESK 1310
A+ +E K
Sbjct: 433 GEAQRQAIMEMK 444
>sp|Q1E1N5|RRP3_COCIM ATP-dependent rRNA helicase RRP3 OS=Coccidioides immitis (strain RS)
GN=RRP3 PE=3 SV=1
Length = 474
Score = 226 bits (575), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 146/465 (31%), Positives = 231/465 (49%), Gaps = 96/465 (20%)
Query: 746 TSANKELLEVDTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLA 805
T N E +E T+ + + I +++ A G+K PT+IQ+ +P AL
Sbjct: 35 TPGNDEKIEATTTKS---------FKDLGIIDSLCEACDSLGYKAPTQIQAESIPLALQG 85
Query: 806 RKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESAN 865
R D++G AETGSGKT AF +PIL +++K ++
Sbjct: 86 R-DLIGLAETGSGKTAAFALPILQALMDKPQS---------------------------- 116
Query: 866 TTEFVKKTRNKLYALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNK 925
++ L+LAPTRELA Q+ G V+ A +VGGM Q L K
Sbjct: 117 -----------MFGLVLAPTRELAYQISQQFEALGSLISVRCAVIVGGMDMVSQAIALGK 165
Query: 926 CPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTE 985
PHI+VATPGRL + ++ + L + YLV+DE DR+++ P ILD++ +
Sbjct: 166 KPHIIVATPGRLLDHLE--NTKGFSLRSLKYLVMDEADRLLDLDFGP----ILDKI-LKV 218
Query: 986 TSQPRQTFVFSATLTH--------SLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKS 1037
+ R+T++FSAT++ SL N L + +K + VS
Sbjct: 219 LPKERRTYLFSATMSSKVESLQRASLSNPLRVSVSSNKYQTVS----------------- 261
Query: 1038 PKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRT-LVFCNSISSVKRLTQL 1096
TL ++ ++ H KD YL Y + + PG++ ++F +++ +RL L
Sbjct: 262 --------------TLLQNCLIIPHKHKDIYLIYLLNEFPGQSVIIFTRTVNETQRLAIL 307
Query: 1097 LTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPR 1156
L L +PLH ++Q RL L +FR ++ +IL+ATDVAARGLDIP ++ V++Y +P
Sbjct: 308 LRALGFGAIPLHGQLSQSARLGALGKFRSRSRNILVATDVAARGLDIPSVDLVLNYDLPS 367
Query: 1157 TSEIYIHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVD 1201
S+ YIHR GRTARA G L+ ++ ++ ++ +L K++D
Sbjct: 368 DSKTYIHRVGRTARAGKSGRAFSLVTQYDVEIWQRIEAALGKELD 412
Score = 189 bits (480), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 161/591 (27%), Positives = 246/591 (41%), Gaps = 188/591 (31%)
Query: 129 TSANKELLEVDTSNNEDMFVQMAEWVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLA 188
T N E +E T+ + + I +++ A G+K PT+IQ+ +P AL
Sbjct: 35 TPGNDEKIEATTTKS---------FKDLGIIDSLCEACDSLGYKAPTQIQAESIPLALQG 85
Query: 189 RKDIVGAAETGSGKTLAFGIPILTGIVNKLENPTEEDENDSGLEEEAEEVLEELEEESAN 248
R D++G AETGSGKT AF +PIL +++K ++
Sbjct: 86 R-DLIGLAETGSGKTAAFALPILQALMDKPQS---------------------------- 116
Query: 249 TTEFVKKTRNKLYALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNK 308
++ L+LAPTRELA Q+ G V+ A +VGGM Q L K
Sbjct: 117 -----------MFGLVLAPTRELAYQISQQFEALGSLISVRCAVIVGGMDMVSQAIALGK 165
Query: 309 CPHILVATPGRLWEFIQLGHFHLTELYKINYLVIDETDRMIESGHFPELKNILDRVTMTE 368
PHI+VATPGRL + ++ + L + YLV+DE DR+++ P L IL +
Sbjct: 166 KPHIIVATPGRLLDHLE--NTKGFSLRSLKYLVMDEADRLLDLDFGPILDKILKVL---- 219
Query: 369 TSQPRQTMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLTH--------SLKNSLNL 420
P++ R+T++FSAT++ SL N L +
Sbjct: 220 ---PKE--------------------------RRTYLFSATMSSKVESLQRASLSNPLRV 250
Query: 421 KKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYL 480
+K + VS TL ++ ++ H KD YL
Sbjct: 251 SVSSNKYQTVS-------------------------------TLLQNCLIIPHKHKDIYL 279
Query: 481 YYFILQHPGRTLCEEIQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFI 540
Y + + PG+++ I T+T+ E+
Sbjct: 280 IYLLNEFPGQSV---------------------IIFTRTVNET----------------- 301
Query: 541 LQHPGRTLVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNNSILLA 600
+RL LL L +PLH ++Q RL L +FR ++ +IL+A
Sbjct: 302 -----------------QRLAILLRALGFGAIPLHGQLSQSARLGALGKFRSRSRNILVA 344
Query: 601 TDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTVVLIESDEIPLKTKFN 660
TDVAARGLDIP ++ V++Y +P S+ YIHR GRTARA G L+ T+++
Sbjct: 345 TDVAARGLDIPSVDLVLNYDLPSDSKTYIHRVGRTARAGKSGRAFSLV--------TQYD 396
Query: 661 LQEEENNEEEERAEADKEKTEDINVTVSSKKKKLKRKQNPSQVEVSELSAN 711
++ + E E D+ K E V V S ++ Q + E+ EL N
Sbjct: 397 VEIWQRIEAALGKELDEYKVEKEEVMVLS--DRVGEAQRHAITEMKELHEN 445
Score = 60.8 bits (146), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 64/135 (47%), Gaps = 15/135 (11%)
Query: 1353 SWDALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPG 1412
S L+LAPTRELA Q+ G V+ A +VGGM Q L K PHI+VATPG
Sbjct: 116 SMFGLVLAPTRELAYQISQQFEALGSLISVRCAVIVGGMDMVSQAIALGKKPHIIVATPG 175
Query: 1413 AL-----SLKRIDLAKSIEYLESKIKKNRPDNWLEKAAKDMDIIIDDENLIQPKANSREN 1467
L + K L +S++YL + D L+ D I+D + PK R
Sbjct: 176 RLLDHLENTKGFSL-RSLKYL----VMDEADRLLD---LDFGPILDKILKVLPK--ERRT 225
Query: 1468 ALMSKALVSKRKELQ 1482
L S + SK + LQ
Sbjct: 226 YLFSATMSSKVESLQ 240
>sp|Q8GY84|RH10_ARATH DEAD-box ATP-dependent RNA helicase 10 OS=Arabidopsis thaliana
GN=RH10 PE=2 SV=2
Length = 456
Score = 225 bits (574), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 153/480 (31%), Positives = 245/480 (51%), Gaps = 77/480 (16%)
Query: 770 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 829
+ + + E +++A + G+K P+KIQ+ +P AL KD++G A+TGSGKT AF IPIL
Sbjct: 11 FAELGVREELVKACERLGWKNPSKIQAEALPFALEG-KDVIGLAQTGSGKTGAFAIPILQ 69
Query: 830 GIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELA 889
++ + + E G ++ +A +L+PTRELA
Sbjct: 70 ALLEYVYD----SEPKKG-----------------------RRPDPAFFACVLSPTRELA 102
Query: 890 IQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLT 949
IQ+ G ++ A +VGG+ +Q L K PH++VATPGRLW+ H++
Sbjct: 103 IQIAEQFEALGADISLRCAVLVGGIDRMQQTIALGKRPHVIVATPGRLWD-------HMS 155
Query: 950 E-----LYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLK 1004
+ L + YLV+DE DR++ L IL+ + + R+TF+FSAT+T
Sbjct: 156 DTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPLE-----RKTFLFSATMT---- 206
Query: 1005 NSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDE 1064
KKV ++LQ +++P ++ K TL +
Sbjct: 207 ------------KKV-------RKLQRAC-LRNPVKIEAASKYSTVDTLKQQYRFVAAKY 246
Query: 1065 KDSYLYYFILQHPGRT-LVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRF 1123
KD YL Y + + P T ++F + + L +L L +P+ M Q +RL L++F
Sbjct: 247 KDCYLVYILSEMPESTSMIFTRTCDGTRFLALVLRSLGFRAIPISGQMTQSKRLGALNKF 306
Query: 1124 RDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIES 1183
+ +IL+ TDVA+RGLDIP ++ VI+Y +P S+ YIHR GRTARA G+ + L+
Sbjct: 307 KAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKDYIHRVGRTARAGRSGVGISLVNQ 366
Query: 1184 DEIPLYIKMFNSLEKKVDLPDFPIDES-VLSLIKKRIDLAKSIEYL---ESKIKKNRPDN 1239
E+ YI++ + KK LP++P +E VLSL+ +R+ AK + + ES +K R ++
Sbjct: 367 YELEWYIQIEKLIGKK--LPEYPAEEDEVLSLL-ERVAEAKKLSAMNMKESGGRKRRGED 423
Score = 174 bits (440), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 137/506 (27%), Positives = 216/506 (42%), Gaps = 152/506 (30%)
Query: 153 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 212
+ + + E +++A + G+K P+KIQ+ +P AL KD++G A+TGSGKT AF IPIL
Sbjct: 11 FAELGVREELVKACERLGWKNPSKIQAEALPFALEG-KDVIGLAQTGSGKTGAFAIPILQ 69
Query: 213 GIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELA 272
++ + + E G ++ +A +L+PTRELA
Sbjct: 70 ALLEYVYD----SEPKKG-----------------------RRPDPAFFACVLSPTRELA 102
Query: 273 IQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLT 332
IQ+ G ++ A +VGG+ +Q L K PH++VATPGRLW+ H++
Sbjct: 103 IQIAEQFEALGADISLRCAVLVGGIDRMQQTIALGKRPHVIVATPGRLWD-------HMS 155
Query: 333 E-----LYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKN 387
+ L + YLV+DE DR++ L IL+ + +
Sbjct: 156 DTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPLE-------------------- 195
Query: 388 ILDRVTMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIK 447
R+TF+FSAT+T KKV ++LQ ++
Sbjct: 196 -------------RKTFLFSATMT----------------KKV-------RKLQRAC-LR 218
Query: 448 SPKIVDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDLLNIKSPKI 507
+P ++ K TL + KD YL Y + + P T
Sbjct: 219 NPVKIEAASKYSTVDTLKQQYRFVAAKYKDCYLVYILSEMPEST---------------- 262
Query: 508 VDLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTML 567
+ T+T ++ L +L R+L F
Sbjct: 263 -----SMIFTRTCDGTRFLA-----------LVL----RSLGF----------------- 285
Query: 568 KCSPLPLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEI 627
+P+ M Q +RL L++F+ +IL+ TDVA+RGLDIP ++ VI+Y +P S+
Sbjct: 286 --RAIPISGQMTQSKRLGALNKFKAGECNILVCTDVASRGLDIPSVDVVINYDIPTNSKD 343
Query: 628 YIHRSGRTARANNEGLTVVLIESDEI 653
YIHR GRTARA G+ + L+ E+
Sbjct: 344 YIHRVGRTARAGRSGVGISLVNQYEL 369
Score = 55.1 bits (131), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%)
Query: 1353 SWDALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPG 1412
++ A +L+PTRELAIQ+ G ++ A +VGG+ +Q L K PH++VATPG
Sbjct: 89 AFFACVLSPTRELAIQIAEQFEALGADISLRCAVLVGGIDRMQQTIALGKRPHVIVATPG 148
Query: 1413 AL 1414
L
Sbjct: 149 RL 150
Score = 45.8 bits (107), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 1239 NWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDES-VLSLIKKR 1297
+++HR GRTARA G+ + L+ E+ YI++ + KK LP++P +E VLSL+ +R
Sbjct: 343 DYIHRVGRTARAGRSGVGISLVNQYELEWYIQIEKLIGKK--LPEYPAEEDEVLSLL-ER 399
Query: 1298 IDLAKSIEYL---ESKIKKNRPDN 1318
+ AK + + ES +K R ++
Sbjct: 400 VAEAKKLSAMNMKESGGRKRRGED 423
>sp|Q6FNK8|RRP3_CANGA ATP-dependent rRNA helicase RRP3 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=RRP3 PE=3 SV=1
Length = 493
Score = 225 bits (573), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 148/454 (32%), Positives = 235/454 (51%), Gaps = 73/454 (16%)
Query: 770 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 829
+ + N+ +I+A F PT IQ+ +P AL A D++G A+TGSGKT AF IPIL
Sbjct: 75 FAQLNLVPELIQACQNLNFTKPTPIQARAIPPAL-AGSDVIGLAQTGSGKTAAFAIPIL- 132
Query: 830 GIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELA 889
NKL ED+ YA +LAPTRELA
Sbjct: 133 ---NKLW----EDQQ-------------------------------PYYACVLAPTRELA 154
Query: 890 IQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLT 949
Q++ G V+ C+VGGM+ Q R L + PHI++ATPGRL + ++ +
Sbjct: 155 QQIKETFDSLGSLMGVRTTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLE--NTKGF 212
Query: 950 ELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTFVFSATLTHSLKNSLNL 1009
L + +LV+DE DR+++ P +LDR+ ++ R T++FSAT+T
Sbjct: 213 SLKNLKFLVMDEADRLLDMEFGP----VLDRILKIIPTKGRTTYLFSATMT--------- 259
Query: 1010 KKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIVDLTEKIGITKTLTESKILCKHDEKDSYL 1069
SK K+ + ++ +P ++ K TL ++ ++ K+++L
Sbjct: 260 ----SKIDKLQRA-----------SLTNPVKCAVSNKYQTVDTLVQTLMVVPGGLKNTFL 304
Query: 1070 YYFILQHPGRT-LVFCNSISSVKRLTQLLTMLKCSPLPLHASMNQRQRLKNLDRFRDQNN 1128
Y + + G+T ++F + ++ +RL+ L +L+ S LH +NQ QR LD F+
Sbjct: 305 IYLLNEFIGKTVIIFTRTKANAERLSGLCNLLEFSATALHGDLNQNQRTGALDLFKAGKR 364
Query: 1129 SILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRSGRTARANNEGLTLVLIESDEIPL 1188
SIL+ATDVAARGLDIP ++ VI+Y +P S+ YIHR GRTARA G ++ L+ ++ L
Sbjct: 365 SILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRVGRTARAGRSGKSISLVSQYDLEL 424
Query: 1189 YIKMFNSLEKKVDLPDFPIDESVLSLIKKRIDLA 1222
+++ L KK LP +D++++ ++ +D A
Sbjct: 425 ILRIEEVLGKK--LPKESVDKNIILTLRDSVDKA 456
Score = 178 bits (452), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 142/503 (28%), Positives = 215/503 (42%), Gaps = 153/503 (30%)
Query: 153 WVKFNIPETIIRALYQKGFKTPTKIQSMVMPSALLARKDIVGAAETGSGKTLAFGIPILT 212
+ + N+ +I+A F PT IQ+ +P AL A D++G A+TGSGKT AF IPIL
Sbjct: 75 FAQLNLVPELIQACQNLNFTKPTPIQARAIPPAL-AGSDVIGLAQTGSGKTAAFAIPIL- 132
Query: 213 GIVNKLENPTEEDENDSGLEEEAEEVLEELEEESANTTEFVKKTRNKLYALILAPTRELA 272
NKL ED+ YA +LAPTRELA
Sbjct: 133 ---NKLW----EDQQ-------------------------------PYYACVLAPTRELA 154
Query: 273 IQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGRLWEFIQLGHFHLT 332
Q++ G V+ C+VGGM+ Q R L + PHI++ATPGRL + ++ +
Sbjct: 155 QQIKETFDSLGSLMGVRTTCIVGGMNMMDQARDLMRKPHIIIATPGRLMDHLE--NTKGF 212
Query: 333 ELYKINYLVIDETDRMIESGHFPELKNILDRVTMTETSQPRQTMIESGHFPELKNILDRV 392
L + +LV+DE DR+++ P +LDR+
Sbjct: 213 SLKNLKFLVMDEADRLLDMEFGP--------------------------------VLDRI 240
Query: 393 TMTETSQPRQTFVFSATLTHSLKNSLNLKKGQSKSKKVSKGDPSIKRLQDLLNIKSPKIV 452
++ R T++FSAT+T SK K+ + ++ +P
Sbjct: 241 LKIIPTKGRTTYLFSATMT-------------SKIDKLQRA-----------SLTNPVKC 276
Query: 453 DLTEKIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLCEEIQDLLNIKSPKIVDLTE 512
++ K TL ++ ++ K+++L Y + + G+T+
Sbjct: 277 AVSNKYQTVDTLVQTLMVVPGGLKNTFLIYLLNEFIGKTV-------------------- 316
Query: 513 KIGITKTLTESKILCKHDEKDSYLYYFILQHPGRTLVFCNSISSVKRLTQLLTMLKCSPL 572
I T+T ++ L CN +L+ S
Sbjct: 317 -IIFTRTKANAERLSG---------------------LCN-------------LLEFSAT 341
Query: 573 PLHASMNQRQRLKNLDRFRDQNNSILLATDVAARGLDIPGIEHVIHYHVPRTSEIYIHRS 632
LH +NQ QR LD F+ SIL+ATDVAARGLDIP ++ VI+Y +P S+ YIHR
Sbjct: 342 ALHGDLNQNQRTGALDLFKAGKRSILVATDVAARGLDIPSVDIVINYDIPVDSKSYIHRV 401
Query: 633 GRTARANNEGLTVVLIESDEIPL 655
GRTARA G ++ L+ ++ L
Sbjct: 402 GRTARAGRSGKSISLVSQYDLEL 424
Score = 61.2 bits (147), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%)
Query: 1354 WDALILAPTRELAIQVQNHILDAGKYTPVKVACVVGGMSTEKQLRILNKCPHILVATPGA 1413
+ A +LAPTRELA Q++ G V+ C+VGGM+ Q R L + PHI++ATPG
Sbjct: 142 YYACVLAPTRELAQQIKETFDSLGSLMGVRTTCIVGGMNMMDQARDLMRKPHIIIATPGR 201
Query: 1414 L 1414
L
Sbjct: 202 L 202
Score = 37.7 bits (86), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 1239 NWLHRSGRTARANNEGLTLVLIESDEIPLYIKMFNSLEKKVDLPDFPIDESVLSLIKKRI 1298
+++HR GRTARA G ++ L+ ++ L +++ L KK LP +D++++ ++ +
Sbjct: 396 SYIHRVGRTARAGRSGKSISLVSQYDLELILRIEEVLGKK--LPKESVDKNIILTLRDSV 453
Query: 1299 DLA 1301
D A
Sbjct: 454 DKA 456
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.131 0.360
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 541,482,972
Number of Sequences: 539616
Number of extensions: 23952829
Number of successful extensions: 169015
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1559
Number of HSP's successfully gapped in prelim test: 1371
Number of HSP's that attempted gapping in prelim test: 126153
Number of HSP's gapped (non-prelim): 31740
length of query: 1493
length of database: 191,569,459
effective HSP length: 131
effective length of query: 1362
effective length of database: 120,879,763
effective search space: 164638237206
effective search space used: 164638237206
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 68 (30.8 bits)