Query psy16312
Match_columns 245
No_of_seqs 198 out of 2058
Neff 9.2
Searched_HMMs 29240
Date Fri Aug 16 18:10:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16312.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16312hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p35_A Trans-aconitate 2-methy 99.9 3.1E-21 1E-25 158.9 16.0 192 2-205 63-259 (259)
2 3ccf_A Cyclopropane-fatty-acyl 99.9 4.2E-21 1.4E-25 160.2 12.5 190 2-205 85-278 (279)
3 1vl5_A Unknown conserved prote 99.8 2.6E-20 9E-25 153.7 12.5 186 2-206 65-253 (260)
4 2yqz_A Hypothetical protein TT 99.8 2.9E-19 1E-23 147.2 16.6 194 2-205 67-263 (263)
5 1xxl_A YCGJ protein; structura 99.7 1.6E-17 5.6E-22 135.4 14.0 187 2-206 49-238 (239)
6 4hg2_A Methyltransferase type 99.7 6E-17 2.1E-21 133.7 12.3 183 2-205 67-252 (257)
7 3mgg_A Methyltransferase; NYSG 99.7 9.6E-16 3.3E-20 127.3 14.8 188 2-206 67-271 (276)
8 2p7i_A Hypothetical protein; p 99.6 6.5E-15 2.2E-19 119.8 15.6 120 2-128 70-198 (250)
9 3ujc_A Phosphoethanolamine N-m 99.6 3.1E-16 1E-20 129.2 7.0 119 2-127 84-204 (266)
10 3bus_A REBM, methyltransferase 99.6 1.2E-15 4E-20 126.4 9.0 179 2-205 90-273 (273)
11 2aot_A HMT, histamine N-methyl 99.6 1.7E-15 5.9E-20 127.0 7.7 184 2-203 88-291 (292)
12 2ld4_A Anamorsin; methyltransf 99.6 4.6E-15 1.6E-19 115.1 8.6 99 2-121 26-128 (176)
13 4htf_A S-adenosylmethionine-de 99.6 7.7E-15 2.6E-19 122.5 10.0 126 2-128 96-231 (285)
14 3g5t_A Trans-aconitate 3-methy 99.6 1.8E-15 6.3E-20 127.2 5.7 190 2-204 67-298 (299)
15 2o57_A Putative sarcosine dime 99.6 1.7E-15 5.9E-20 127.1 4.9 117 2-128 111-233 (297)
16 3dtn_A Putative methyltransfer 99.6 2.5E-14 8.6E-19 115.7 11.0 125 2-128 74-213 (234)
17 3l8d_A Methyltransferase; stru 99.5 8.9E-15 3E-19 118.8 8.3 118 2-127 81-198 (242)
18 3hnr_A Probable methyltransfer 99.5 5.6E-15 1.9E-19 118.4 6.9 124 2-128 73-200 (220)
19 3sm3_A SAM-dependent methyltra 99.5 3.9E-14 1.3E-18 114.2 11.1 130 2-131 58-209 (235)
20 3bgv_A MRNA CAP guanine-N7 met 99.5 1.6E-17 5.6E-22 140.8 -9.7 77 2-78 63-158 (313)
21 3gu3_A Methyltransferase; alph 99.5 5.2E-14 1.8E-18 117.5 11.7 170 2-179 53-254 (284)
22 3ege_A Putative methyltransfer 99.5 8E-15 2.7E-19 121.0 6.2 121 2-135 62-184 (261)
23 3h2b_A SAM-dependent methyltra 99.5 9.8E-15 3.4E-19 115.6 5.8 111 2-128 69-181 (203)
24 4gek_A TRNA (CMO5U34)-methyltr 99.5 1.5E-14 5.1E-19 119.6 6.8 124 2-127 102-243 (261)
25 3dli_A Methyltransferase; PSI- 99.5 3.8E-14 1.3E-18 115.3 9.0 110 2-127 69-182 (240)
26 4fsd_A Arsenic methyltransfera 99.5 1.2E-14 3.9E-19 126.7 6.3 141 2-150 114-273 (383)
27 1vlm_A SAM-dependent methyltra 99.5 1.5E-13 5.2E-18 110.2 11.9 117 2-128 71-187 (219)
28 3dlc_A Putative S-adenosyl-L-m 99.5 1.5E-14 5E-19 115.4 5.7 125 2-128 72-202 (219)
29 3dh0_A SAM dependent methyltra 99.5 5.7E-14 1.9E-18 112.4 8.8 110 2-127 68-179 (219)
30 3ou2_A SAM-dependent methyltra 99.5 5.5E-14 1.9E-18 112.2 7.2 123 2-128 74-204 (218)
31 3kkz_A Uncharacterized protein 99.5 7.1E-14 2.4E-18 115.5 7.8 115 2-128 75-195 (267)
32 3g5l_A Putative S-adenosylmeth 99.5 1.1E-13 3.6E-18 113.4 8.4 75 2-77 73-147 (253)
33 1nkv_A Hypothetical protein YJ 99.5 1.7E-14 5.9E-19 118.2 3.5 115 2-127 65-185 (256)
34 3f4k_A Putative methyltransfer 99.5 1.5E-13 5.2E-18 112.6 8.4 114 2-127 75-194 (257)
35 3cc8_A Putative methyltransfer 99.5 2.7E-13 9.1E-18 108.9 9.7 133 2-145 60-199 (230)
36 3vc1_A Geranyl diphosphate 2-C 99.4 5.6E-14 1.9E-18 118.9 4.6 116 2-128 146-268 (312)
37 2gs9_A Hypothetical protein TT 99.4 6.2E-13 2.1E-17 105.8 10.0 110 2-120 62-171 (211)
38 1xtp_A LMAJ004091AAA; SGPP, st 99.4 1.1E-13 3.7E-18 113.2 4.8 114 2-128 122-237 (254)
39 3ocj_A Putative exported prote 99.4 4.1E-13 1.4E-17 113.2 8.0 123 2-127 149-289 (305)
40 3bkw_A MLL3908 protein, S-aden 99.4 7.6E-13 2.6E-17 107.3 9.3 75 2-77 72-146 (243)
41 3e23_A Uncharacterized protein 99.4 4.7E-13 1.6E-17 106.6 6.6 110 2-130 71-183 (211)
42 3m33_A Uncharacterized protein 99.4 3.8E-12 1.3E-16 102.6 11.5 142 2-206 76-219 (226)
43 2ex4_A Adrenal gland protein A 99.4 3.5E-13 1.2E-17 109.6 5.1 113 2-128 108-224 (241)
44 1pjz_A Thiopurine S-methyltran 99.4 2.8E-13 9.6E-18 107.7 3.8 109 2-128 50-175 (203)
45 3hem_A Cyclopropane-fatty-acyl 99.3 2.2E-12 7.6E-17 108.4 8.7 118 2-127 101-241 (302)
46 3lcc_A Putative methyl chlorid 99.3 2.1E-12 7.2E-17 104.5 8.0 108 2-128 94-206 (235)
47 2g72_A Phenylethanolamine N-me 99.3 5E-13 1.7E-17 111.8 4.3 115 2-129 100-256 (289)
48 1kpg_A CFA synthase;, cyclopro 99.3 1.1E-11 3.7E-16 103.3 12.4 119 2-127 93-226 (287)
49 2qe6_A Uncharacterized protein 99.3 2.2E-12 7.6E-17 107.3 8.0 113 2-125 110-238 (274)
50 2a14_A Indolethylamine N-methy 99.3 8.4E-13 2.9E-17 109.0 4.6 114 2-128 84-237 (263)
51 3i9f_A Putative type 11 methyl 99.3 1.1E-12 3.7E-17 100.8 4.8 102 2-127 45-146 (170)
52 3pfg_A N-methyltransferase; N, 99.3 2.8E-12 9.7E-17 105.5 6.8 71 2-76 78-152 (263)
53 2fk8_A Methoxy mycolic acid sy 99.3 6.4E-12 2.2E-16 106.3 8.3 119 2-127 119-252 (318)
54 2gb4_A Thiopurine S-methyltran 99.3 5.8E-12 2E-16 103.5 7.8 107 2-127 96-225 (252)
55 1ri5_A MRNA capping enzyme; me 99.3 6.8E-13 2.3E-17 110.8 2.1 120 2-127 93-248 (298)
56 3jwh_A HEN1; methyltransferase 99.3 4.5E-12 1.6E-16 101.3 6.4 117 2-125 59-188 (217)
57 1y8c_A S-adenosylmethionine-de 99.3 1.2E-12 4.1E-17 106.2 2.6 76 2-78 65-145 (246)
58 3bkx_A SAM-dependent methyltra 99.3 1.4E-11 4.7E-16 101.9 8.8 127 2-128 74-218 (275)
59 4e2x_A TCAB9; kijanose, tetron 99.3 8.8E-13 3E-17 115.8 1.6 118 2-128 135-252 (416)
60 2i62_A Nicotinamide N-methyltr 99.3 5.4E-12 1.8E-16 103.6 6.1 114 2-128 85-238 (265)
61 3g2m_A PCZA361.24; SAM-depende 99.3 1.7E-12 5.7E-17 109.0 3.1 78 2-80 110-195 (299)
62 2kw5_A SLR1183 protein; struct 99.3 5.9E-12 2E-16 99.4 6.1 117 2-132 57-174 (202)
63 3ofk_A Nodulation protein S; N 99.2 4E-12 1.4E-16 101.4 4.8 75 2-77 79-156 (216)
64 3giw_A Protein of unknown func 99.2 5.8E-12 2E-16 103.9 5.7 117 2-126 111-244 (277)
65 3jwg_A HEN1, methyltransferase 99.2 3.6E-12 1.2E-16 101.9 4.2 74 2-75 59-141 (219)
66 3e8s_A Putative SAM dependent 99.2 4E-12 1.4E-16 101.7 4.1 119 2-128 80-208 (227)
67 3g07_A 7SK snRNA methylphospha 99.2 3.2E-12 1.1E-16 107.2 2.4 100 20-126 154-266 (292)
68 1p91_A Ribosomal RNA large sub 99.2 6.8E-11 2.3E-15 97.5 9.1 118 2-146 115-232 (269)
69 3cgg_A SAM-dependent methyltra 99.2 3.3E-11 1.1E-15 93.9 6.7 97 2-127 74-173 (195)
70 3i53_A O-methyltransferase; CO 99.2 5.9E-11 2E-15 101.1 8.7 116 2-127 199-319 (332)
71 3bxo_A N,N-dimethyltransferase 99.2 2.8E-11 9.6E-16 97.7 6.2 72 2-77 68-143 (239)
72 3d2l_A SAM-dependent methyltra 99.2 1.1E-11 3.8E-16 100.4 3.7 76 2-78 60-140 (243)
73 2p8j_A S-adenosylmethionine-de 99.2 8E-12 2.7E-16 99.0 2.1 124 2-125 52-179 (209)
74 2xvm_A Tellurite resistance pr 99.1 3.4E-11 1.2E-15 94.5 5.5 109 2-129 60-173 (199)
75 3dp7_A SAM-dependent methyltra 99.1 4.4E-11 1.5E-15 103.3 6.6 123 2-127 209-340 (363)
76 3ggd_A SAM-dependent methyltra 99.1 6.6E-11 2.3E-15 96.2 7.3 122 2-127 84-217 (245)
77 2vdw_A Vaccinia virus capping 99.1 7.2E-12 2.5E-16 105.6 0.3 77 2-78 77-172 (302)
78 2r3s_A Uncharacterized protein 99.1 1.3E-10 4.4E-15 98.9 7.9 119 2-127 195-321 (335)
79 3m70_A Tellurite resistance pr 99.1 1.7E-10 5.8E-15 96.0 8.3 108 2-127 148-258 (286)
80 1qzz_A RDMB, aclacinomycin-10- 99.1 2.2E-10 7.4E-15 99.0 9.0 117 2-127 212-337 (374)
81 2pxx_A Uncharacterized protein 99.1 4.8E-11 1.6E-15 94.6 4.3 77 2-78 71-162 (215)
82 1fp1_D Isoliquiritigenin 2'-O- 99.1 3.4E-10 1.2E-14 97.9 9.3 113 2-128 239-359 (372)
83 3reo_A (ISO)eugenol O-methyltr 99.1 2.5E-09 8.7E-14 92.4 14.6 114 2-128 233-354 (368)
84 3gwz_A MMCR; methyltransferase 99.1 4E-10 1.4E-14 97.4 9.4 116 2-127 232-354 (369)
85 3p9c_A Caffeic acid O-methyltr 99.1 2.6E-09 8.9E-14 92.2 14.4 113 2-127 231-351 (364)
86 2zfu_A Nucleomethylin, cerebra 99.1 1.9E-10 6.4E-15 91.6 6.7 79 21-126 98-176 (215)
87 2ip2_A Probable phenazine-spec 99.0 4.5E-10 1.5E-14 95.6 8.5 117 2-127 197-320 (334)
88 3lst_A CALO1 methyltransferase 99.0 1.9E-09 6.5E-14 92.4 12.4 116 2-127 214-334 (348)
89 3mcz_A O-methyltransferase; ad 99.0 4.4E-10 1.5E-14 96.4 7.8 117 2-125 209-335 (352)
90 1fp2_A Isoflavone O-methyltran 99.0 9.8E-10 3.4E-14 94.3 9.5 111 2-127 218-339 (352)
91 1zx0_A Guanidinoacetate N-meth 99.0 6.9E-11 2.4E-15 95.7 1.7 73 2-75 89-170 (236)
92 3thr_A Glycine N-methyltransfe 99.0 3.4E-11 1.2E-15 100.5 -0.2 76 2-77 85-177 (293)
93 1x19_A CRTF-related protein; m 99.0 6.5E-10 2.2E-14 95.6 7.8 121 2-128 220-347 (359)
94 3orh_A Guanidinoacetate N-meth 99.0 5.5E-11 1.9E-15 96.6 0.8 73 2-74 89-169 (236)
95 1ve3_A Hypothetical protein PH 99.0 1.3E-10 4.5E-15 93.0 2.6 76 2-77 66-144 (227)
96 1af7_A Chemotaxis receptor met 99.0 2.9E-10 9.8E-15 94.3 4.5 73 2-74 143-251 (274)
97 1tw3_A COMT, carminomycin 4-O- 99.0 8.1E-10 2.8E-14 95.0 7.5 118 2-128 213-338 (360)
98 2efj_A 3,7-dimethylxanthine me 99.0 2.3E-09 7.9E-14 92.6 9.8 108 22-131 130-294 (384)
99 3mq2_A 16S rRNA methyltransfer 99.0 2.6E-10 8.8E-15 91.1 3.2 115 2-127 57-182 (218)
100 1zg3_A Isoflavanone 4'-O-methy 98.9 4.6E-09 1.6E-13 90.3 11.0 112 2-127 223-345 (358)
101 2avn_A Ubiquinone/menaquinone 98.9 4.7E-10 1.6E-14 92.1 4.6 73 2-78 82-155 (260)
102 3p2e_A 16S rRNA methylase; met 98.9 1.9E-09 6.6E-14 86.8 7.7 119 2-128 54-184 (225)
103 4a6d_A Hydroxyindole O-methylt 98.9 6.8E-09 2.3E-13 89.2 10.8 116 3-127 210-332 (353)
104 3q87_B N6 adenine specific DNA 98.9 1E-08 3.4E-13 78.9 9.8 90 2-128 50-148 (170)
105 1yzh_A TRNA (guanine-N(7)-)-me 98.9 2.4E-09 8.3E-14 85.2 6.4 74 2-75 71-156 (214)
106 1m6e_X S-adenosyl-L-methionnin 98.8 2.6E-08 8.8E-13 85.3 11.6 107 23-131 121-282 (359)
107 3b5i_A S-adenosyl-L-methionine 98.8 1.8E-08 6.1E-13 86.9 10.6 105 24-130 133-299 (374)
108 3fpf_A Mtnas, putative unchara 98.8 2E-09 6.9E-14 89.8 3.5 69 2-75 152-222 (298)
109 4df3_A Fibrillarin-like rRNA/T 98.8 8.1E-09 2.8E-13 83.4 6.1 73 2-76 108-183 (233)
110 3htx_A HEN1; HEN1, small RNA m 98.8 4.1E-09 1.4E-13 98.1 4.7 75 2-77 752-836 (950)
111 3grz_A L11 mtase, ribosomal pr 98.8 3.2E-09 1.1E-13 83.9 3.5 93 2-127 89-183 (205)
112 1dus_A MJ0882; hypothetical pr 98.8 4E-09 1.4E-13 81.9 3.9 78 2-80 80-162 (194)
113 3evz_A Methyltransferase; NYSG 98.7 1.1E-08 3.9E-13 82.0 6.1 74 2-75 85-179 (230)
114 2fca_A TRNA (guanine-N(7)-)-me 98.7 4.8E-09 1.6E-13 83.7 3.1 74 2-75 68-153 (213)
115 3dxy_A TRNA (guanine-N(7)-)-me 98.7 2.2E-09 7.5E-14 86.1 0.9 74 2-75 64-150 (218)
116 1xdz_A Methyltransferase GIDB; 98.7 1.1E-08 3.8E-13 82.9 5.1 70 2-75 100-174 (240)
117 3e05_A Precorrin-6Y C5,15-meth 98.7 1.8E-08 6.2E-13 79.4 5.7 71 2-75 70-142 (204)
118 3ckk_A TRNA (guanine-N(7)-)-me 98.7 8.7E-09 3E-13 83.5 3.7 74 2-75 76-168 (235)
119 3mti_A RRNA methylase; SAM-dep 98.7 3.4E-09 1.2E-13 82.2 1.1 76 2-77 50-137 (185)
120 1ej0_A FTSJ; methyltransferase 98.7 1.2E-08 4.3E-13 77.7 4.2 65 20-84 62-145 (180)
121 3hm2_A Precorrin-6Y C5,15-meth 98.7 1.2E-08 4E-13 78.4 3.9 70 2-76 55-128 (178)
122 3dmg_A Probable ribosomal RNA 98.7 1.1E-08 3.9E-13 88.6 4.3 77 2-78 261-343 (381)
123 1wzn_A SAM-dependent methyltra 98.7 6.9E-09 2.4E-13 84.4 2.7 74 2-76 69-146 (252)
124 3p9n_A Possible methyltransfer 98.7 3.2E-09 1.1E-13 82.8 0.6 76 2-77 73-155 (189)
125 3njr_A Precorrin-6Y methylase; 98.7 2.1E-08 7.3E-13 79.4 5.1 95 2-129 83-180 (204)
126 3sso_A Methyltransferase; macr 98.6 3.3E-09 1.1E-13 91.7 0.2 66 2-75 253-324 (419)
127 1fbn_A MJ fibrillarin homologu 98.6 2.3E-08 7.9E-13 80.5 4.7 67 2-74 104-177 (230)
128 2b25_A Hypothetical protein; s 98.6 5.3E-09 1.8E-13 89.1 0.9 121 2-130 136-282 (336)
129 3iv6_A Putative Zn-dependent a 98.6 1.8E-08 6.2E-13 82.8 4.0 70 2-76 73-149 (261)
130 3bwc_A Spermidine synthase; SA 98.6 9.8E-09 3.3E-13 86.4 2.3 103 1-127 124-238 (304)
131 2frn_A Hypothetical protein PH 98.6 1.3E-07 4.3E-12 78.6 8.3 104 2-132 154-260 (278)
132 3lbf_A Protein-L-isoaspartate 98.6 1.1E-08 3.7E-13 81.0 1.6 70 2-77 105-176 (210)
133 2b3t_A Protein methyltransfera 98.6 2.7E-08 9.4E-13 82.3 4.0 95 2-126 139-260 (276)
134 3eey_A Putative rRNA methylase 98.6 8.2E-09 2.8E-13 80.9 0.4 76 2-77 53-141 (197)
135 1yb2_A Hypothetical protein TA 98.6 2.4E-08 8.1E-13 82.7 2.8 68 2-75 141-211 (275)
136 1nt2_A Fibrillarin-like PRE-rR 98.5 2.8E-08 9.4E-13 79.2 2.5 71 2-75 87-161 (210)
137 3lpm_A Putative methyltransfer 98.5 5.6E-08 1.9E-12 79.7 4.3 74 2-75 78-176 (259)
138 2fyt_A Protein arginine N-meth 98.5 2.2E-08 7.4E-13 85.6 1.8 70 2-72 93-168 (340)
139 3opn_A Putative hemolysin; str 98.5 6.5E-09 2.2E-13 84.1 -1.5 120 2-136 66-191 (232)
140 2pwy_A TRNA (adenine-N(1)-)-me 98.5 2.6E-08 8.8E-13 81.2 2.0 69 2-75 127-198 (258)
141 3q7e_A Protein arginine N-meth 98.5 3.3E-08 1.1E-12 84.8 2.6 71 2-73 95-171 (349)
142 1vbf_A 231AA long hypothetical 98.5 4.3E-08 1.5E-12 78.7 2.8 70 2-77 98-167 (231)
143 1i9g_A Hypothetical protein RV 98.5 3.2E-08 1.1E-12 81.8 1.9 70 2-76 130-204 (280)
144 3hp7_A Hemolysin, putative; st 98.5 2.3E-08 8E-13 83.3 0.5 114 2-128 114-231 (291)
145 2ift_A Putative methylase HI07 98.5 1.9E-08 6.4E-13 79.4 -0.1 75 2-77 82-165 (201)
146 2h00_A Methyltransferase 10 do 98.5 4.9E-08 1.7E-12 79.6 2.3 118 2-127 95-236 (254)
147 2pjd_A Ribosomal RNA small sub 98.5 8.3E-08 2.8E-12 82.0 3.8 75 2-78 226-306 (343)
148 3uwp_A Histone-lysine N-methyl 98.4 2E-08 6.7E-13 87.2 -0.4 72 2-74 203-287 (438)
149 4dzr_A Protein-(glutamine-N5) 98.4 1.2E-08 4.2E-13 80.5 -1.7 73 2-75 60-165 (215)
150 2nxc_A L11 mtase, ribosomal pr 98.4 4.6E-08 1.6E-12 80.1 1.6 95 2-128 148-243 (254)
151 2oxt_A Nucleoside-2'-O-methylt 98.4 3.9E-07 1.3E-11 75.1 6.9 74 2-79 101-189 (265)
152 2wa2_A Non-structural protein 98.4 2.3E-07 7.9E-12 76.9 5.4 75 2-80 109-198 (276)
153 2ipx_A RRNA 2'-O-methyltransfe 98.4 5.5E-08 1.9E-12 78.3 1.5 71 2-75 108-182 (233)
154 2fpo_A Methylase YHHF; structu 98.4 4.1E-08 1.4E-12 77.6 0.4 74 2-76 83-161 (202)
155 3id6_C Fibrillarin-like rRNA/T 98.4 3.5E-07 1.2E-11 73.8 5.8 67 2-75 107-181 (232)
156 2cmg_A Spermidine synthase; tr 98.4 3.3E-07 1.1E-11 75.4 5.4 67 1-75 99-171 (262)
157 2ozv_A Hypothetical protein AT 98.4 5E-07 1.7E-11 74.1 6.5 74 2-75 66-170 (260)
158 1jsx_A Glucose-inhibited divis 98.4 1.3E-07 4.4E-12 74.5 2.8 69 2-75 95-165 (207)
159 1dl5_A Protein-L-isoaspartate 98.4 8.9E-08 3E-12 80.9 1.6 69 2-76 106-176 (317)
160 3gdh_A Trimethylguanosine synt 98.4 1.7E-09 5.9E-14 87.6 -8.7 72 2-74 106-180 (241)
161 3mb5_A SAM-dependent methyltra 98.4 1.6E-07 5.5E-12 76.5 3.0 68 2-75 124-194 (255)
162 4dcm_A Ribosomal RNA large sub 98.4 2.3E-07 7.7E-12 80.3 4.1 76 2-78 252-337 (375)
163 3g89_A Ribosomal RNA small sub 98.3 6.6E-08 2.3E-12 79.0 0.6 70 2-75 110-184 (249)
164 2yxd_A Probable cobalt-precorr 98.3 1E-07 3.5E-12 73.2 1.5 91 2-127 63-155 (183)
165 1g8a_A Fibrillarin-like PRE-rR 98.3 3.2E-07 1.1E-11 73.4 4.5 71 2-75 104-178 (227)
166 1l3i_A Precorrin-6Y methyltran 98.3 5.2E-08 1.8E-12 75.4 -0.2 71 2-76 61-135 (192)
167 2plw_A Ribosomal RNA methyltra 98.3 6.1E-07 2.1E-11 70.2 5.9 64 20-83 63-162 (201)
168 2qm3_A Predicted methyltransfe 98.3 3.6E-07 1.2E-11 79.0 4.8 74 2-76 201-279 (373)
169 2yxe_A Protein-L-isoaspartate 98.3 1.4E-07 4.7E-12 74.8 2.0 70 2-77 108-179 (215)
170 3r0q_C Probable protein argini 98.3 7.6E-08 2.6E-12 83.3 0.5 71 2-74 92-168 (376)
171 2yvl_A TRMI protein, hypotheti 98.3 3.1E-07 1.1E-11 74.2 4.1 70 2-76 119-191 (248)
172 3gjy_A Spermidine synthase; AP 98.3 3E-07 1E-11 77.5 3.9 77 1-77 118-202 (317)
173 1g6q_1 HnRNP arginine N-methyl 98.3 1.7E-07 5.7E-12 79.7 2.4 71 2-73 67-143 (328)
174 1ixk_A Methyltransferase; open 98.3 2.7E-07 9.2E-12 78.0 3.6 75 2-76 149-247 (315)
175 3adn_A Spermidine synthase; am 98.3 1.8E-07 6.2E-12 78.2 2.5 75 1-75 112-198 (294)
176 3fzg_A 16S rRNA methylase; met 98.3 1.9E-08 6.5E-13 78.3 -3.3 71 2-73 79-150 (200)
177 1o9g_A RRNA methyltransferase; 98.3 3.1E-07 1.1E-11 74.7 3.6 52 24-75 149-214 (250)
178 3u81_A Catechol O-methyltransf 98.3 7.1E-08 2.4E-12 77.1 -0.4 73 2-75 89-170 (221)
179 2esr_A Methyltransferase; stru 98.3 3.9E-08 1.3E-12 75.6 -1.9 76 2-78 60-141 (177)
180 3bzb_A Uncharacterized protein 98.3 1.1E-06 3.7E-11 73.0 6.3 74 2-75 108-205 (281)
181 1i1n_A Protein-L-isoaspartate 98.3 1.8E-07 6.2E-12 74.8 1.5 69 2-76 108-183 (226)
182 1r18_A Protein-L-isoaspartate( 98.3 1.5E-07 5E-12 75.5 0.9 69 2-77 120-196 (227)
183 2fhp_A Methylase, putative; al 98.3 6.4E-08 2.2E-12 74.8 -1.4 76 2-78 73-157 (187)
184 1ws6_A Methyltransferase; stru 98.3 2.4E-08 8.1E-13 76.1 -4.0 75 2-78 69-150 (171)
185 2p41_A Type II methyltransfera 98.3 8.3E-07 2.8E-11 74.6 5.1 57 20-78 131-194 (305)
186 1o54_A SAM-dependent O-methylt 98.2 3.2E-07 1.1E-11 75.9 2.2 68 2-75 143-213 (277)
187 2bm8_A Cephalosporin hydroxyla 98.2 5.4E-07 1.9E-11 72.9 3.5 69 2-76 115-188 (236)
188 1uir_A Polyamine aminopropyltr 98.2 1.6E-07 5.6E-12 79.3 0.1 75 1-75 106-195 (314)
189 2vdv_E TRNA (guanine-N(7)-)-me 98.2 6.8E-07 2.3E-11 72.6 3.8 74 2-75 79-173 (246)
190 3tma_A Methyltransferase; thum 98.2 4.1E-07 1.4E-11 78.0 2.3 75 2-76 234-318 (354)
191 3ntv_A MW1564 protein; rossman 98.2 1.9E-07 6.5E-12 75.3 -0.1 71 2-75 101-176 (232)
192 2b2c_A Spermidine synthase; be 98.2 2.4E-07 8.1E-12 78.3 0.3 75 1-75 137-222 (314)
193 2pt6_A Spermidine synthase; tr 98.2 3.6E-07 1.2E-11 77.4 1.3 76 1-76 145-231 (321)
194 1jg1_A PIMT;, protein-L-isoasp 98.2 3.3E-07 1.1E-11 73.8 1.0 69 2-77 120-191 (235)
195 2o07_A Spermidine synthase; st 98.2 2.2E-07 7.4E-12 78.2 -0.2 75 1-75 124-209 (304)
196 2xyq_A Putative 2'-O-methyl tr 98.2 1.2E-06 4.1E-11 73.0 4.3 56 21-77 106-173 (290)
197 1xj5_A Spermidine synthase 1; 98.2 3.8E-07 1.3E-11 77.6 1.3 75 1-75 149-235 (334)
198 1inl_A Spermidine synthase; be 98.2 3.5E-07 1.2E-11 76.6 0.9 76 1-76 119-206 (296)
199 3a27_A TYW2, uncharacterized p 98.2 8.1E-07 2.8E-11 73.4 3.1 71 2-77 149-221 (272)
200 2i7c_A Spermidine synthase; tr 98.2 3.3E-07 1.1E-11 76.2 0.7 76 1-76 107-193 (283)
201 3dr5_A Putative O-methyltransf 98.2 4.9E-07 1.7E-11 72.4 1.7 70 2-74 87-162 (221)
202 3tfw_A Putative O-methyltransf 98.2 4.7E-07 1.6E-11 73.7 1.6 71 2-75 94-170 (248)
203 1iy9_A Spermidine synthase; ro 98.2 5.9E-07 2E-11 74.4 2.2 76 1-76 104-190 (275)
204 2pbf_A Protein-L-isoaspartate 98.2 2E-07 7E-12 74.5 -0.7 69 2-76 115-194 (227)
205 2y1w_A Histone-arginine methyl 98.1 3.8E-07 1.3E-11 78.1 0.8 71 2-74 79-154 (348)
206 3c3p_A Methyltransferase; NP_9 98.1 3.8E-07 1.3E-11 72.1 -0.0 70 2-75 87-160 (210)
207 2gpy_A O-methyltransferase; st 98.1 7.8E-07 2.7E-11 71.5 1.3 71 2-75 84-160 (233)
208 3b3j_A Histone-arginine methyl 98.0 9.7E-07 3.3E-11 78.8 1.4 71 2-74 187-262 (480)
209 2yxl_A PH0851 protein, 450AA l 98.0 3.9E-06 1.3E-10 74.3 4.4 76 2-77 290-391 (450)
210 2nyu_A Putative ribosomal RNA 98.0 7.4E-06 2.5E-10 63.6 4.9 65 20-84 70-154 (196)
211 3ajd_A Putative methyltransfer 98.0 1.2E-06 4.1E-11 72.4 0.4 75 2-76 114-212 (274)
212 1u2z_A Histone-lysine N-methyl 98.0 1.7E-06 5.7E-11 76.0 1.3 72 2-74 272-358 (433)
213 1mjf_A Spermidine synthase; sp 97.9 1.7E-06 5.9E-11 71.8 0.9 74 1-75 103-193 (281)
214 4azs_A Methyltransferase WBDD; 97.9 5.9E-07 2E-11 81.9 -2.3 73 2-74 94-172 (569)
215 3r3h_A O-methyltransferase, SA 97.9 3.4E-07 1.2E-11 74.4 -3.7 71 2-75 91-170 (242)
216 1ne2_A Hypothetical protein TA 97.9 1.1E-05 3.8E-10 63.0 5.2 58 2-65 80-139 (200)
217 2igt_A SAM dependent methyltra 97.9 5.1E-07 1.7E-11 76.8 -2.9 75 2-76 181-273 (332)
218 3tr6_A O-methyltransferase; ce 97.9 9.5E-07 3.3E-11 70.4 -1.5 71 2-75 95-174 (225)
219 1sui_A Caffeoyl-COA O-methyltr 97.9 2.5E-06 8.7E-11 69.4 0.6 71 2-75 110-190 (247)
220 3duw_A OMT, O-methyltransferas 97.8 2.8E-06 9.6E-11 67.6 0.3 71 2-75 89-167 (223)
221 2frx_A Hypothetical protein YE 97.8 7.1E-06 2.4E-10 73.1 2.8 76 2-77 148-248 (479)
222 1nv8_A HEMK protein; class I a 97.8 6.8E-06 2.3E-10 68.3 2.2 71 2-75 152-249 (284)
223 3cbg_A O-methyltransferase; cy 97.8 3.4E-06 1.2E-10 67.8 0.1 71 2-75 103-182 (232)
224 1wy7_A Hypothetical protein PH 97.7 8.1E-05 2.8E-09 58.2 7.6 66 2-72 78-146 (207)
225 3dou_A Ribosomal RNA large sub 97.7 4.2E-05 1.4E-09 59.6 5.4 61 20-80 62-144 (191)
226 3lec_A NADB-rossmann superfami 97.7 4.7E-05 1.6E-09 61.1 5.6 92 2-125 51-145 (230)
227 2hnk_A SAM-dependent O-methylt 97.7 8.1E-06 2.8E-10 65.8 1.0 71 2-75 91-181 (239)
228 3c3y_A Pfomt, O-methyltransfer 97.7 5.3E-06 1.8E-10 67.0 -0.3 71 2-75 101-181 (237)
229 3tm4_A TRNA (guanine N2-)-meth 97.7 3E-05 1E-09 66.8 4.4 72 2-75 247-329 (373)
230 4hc4_A Protein arginine N-meth 97.7 2.5E-05 8.6E-10 67.3 3.8 69 2-72 112-186 (376)
231 3v97_A Ribosomal RNA large sub 97.7 3.8E-06 1.3E-10 78.3 -1.5 75 2-76 568-658 (703)
232 1sqg_A SUN protein, FMU protei 97.7 1.6E-05 5.3E-10 69.9 2.5 75 2-76 276-375 (429)
233 1zq9_A Probable dimethyladenos 97.6 1.3E-05 4.3E-10 66.7 1.5 69 2-72 56-144 (285)
234 2avd_A Catechol-O-methyltransf 97.6 2.6E-06 9E-11 68.0 -2.7 71 2-75 100-179 (229)
235 1wxx_A TT1595, hypothetical pr 97.6 3.3E-06 1.1E-10 73.1 -2.4 76 2-77 237-327 (382)
236 1yub_A Ermam, rRNA methyltrans 97.6 4.8E-06 1.6E-10 67.6 -1.7 73 2-75 57-145 (245)
237 2as0_A Hypothetical protein PH 97.6 3.3E-06 1.1E-10 73.5 -3.0 76 2-77 246-337 (396)
238 3m4x_A NOL1/NOP2/SUN family pr 97.6 1.6E-05 5.6E-10 70.2 1.4 76 2-77 136-236 (456)
239 2f8l_A Hypothetical protein LM 97.6 5.4E-05 1.8E-09 64.4 4.5 73 2-75 165-256 (344)
240 2b78_A Hypothetical protein SM 97.6 3.1E-06 1.1E-10 73.4 -3.4 76 2-77 241-333 (385)
241 3k6r_A Putative transferase PH 97.5 0.00023 7.9E-09 58.8 7.8 104 2-132 154-260 (278)
242 3m6w_A RRNA methylase; rRNA me 97.5 1.2E-05 4.2E-10 71.2 -1.0 75 2-77 132-231 (464)
243 3gnl_A Uncharacterized protein 97.4 0.00012 4.2E-09 59.2 4.9 72 2-75 51-125 (244)
244 3c0k_A UPF0064 protein YCCW; P 97.4 1.3E-05 4.5E-10 69.6 -1.1 76 2-77 249-341 (396)
245 2yx1_A Hypothetical protein MJ 97.4 5.2E-05 1.8E-09 64.4 2.6 70 2-78 222-294 (336)
246 3frh_A 16S rRNA methylase; met 97.4 4.1E-05 1.4E-09 61.7 1.8 70 2-72 132-203 (253)
247 3kr9_A SAM-dependent methyltra 97.3 0.00026 9E-09 56.6 5.4 91 2-125 45-139 (225)
248 3lcv_B Sisomicin-gentamicin re 97.3 6.7E-05 2.3E-09 61.1 1.8 70 2-72 162-233 (281)
249 4dmg_A Putative uncharacterize 97.3 4E-05 1.4E-09 66.5 0.1 75 2-76 242-327 (393)
250 2qfm_A Spermine synthase; sper 97.0 8.6E-05 2.9E-09 63.4 -0.1 75 1-75 216-314 (364)
251 3evf_A RNA-directed RNA polyme 96.9 0.0016 5.4E-08 53.3 6.1 58 21-78 123-187 (277)
252 3o4f_A Spermidine synthase; am 96.9 0.00056 1.9E-08 56.8 3.5 75 1-75 112-198 (294)
253 2vz8_A Fatty acid synthase; tr 96.9 0.00014 4.8E-09 76.3 -0.6 116 2-126 1275-1392(2512)
254 2okc_A Type I restriction enzy 96.8 0.00055 1.9E-08 60.3 3.0 73 2-75 214-307 (445)
255 3k0b_A Predicted N6-adenine-sp 96.8 0.0009 3.1E-08 58.0 4.2 73 2-75 269-350 (393)
256 2h1r_A Dimethyladenosine trans 96.7 0.00055 1.9E-08 57.1 2.3 48 2-51 70-119 (299)
257 2ih2_A Modification methylase 96.7 0.00084 2.9E-08 58.3 3.4 67 2-76 70-165 (421)
258 3ldg_A Putative uncharacterize 96.7 0.0018 6.1E-08 55.9 5.0 74 2-76 262-344 (384)
259 1uwv_A 23S rRNA (uracil-5-)-me 96.6 0.0012 4.3E-08 57.8 3.7 70 2-75 314-389 (433)
260 2jjq_A Uncharacterized RNA met 96.6 0.0015 5E-08 57.3 4.0 69 2-75 318-387 (425)
261 1qam_A ERMC' methyltransferase 96.5 0.00019 6.6E-09 58.1 -1.7 47 2-49 58-105 (244)
262 3ldu_A Putative methylase; str 96.4 0.00092 3.1E-08 57.8 1.8 73 2-75 263-344 (385)
263 3bt7_A TRNA (uracil-5-)-methyl 96.2 0.00074 2.5E-08 58.0 -0.3 69 2-78 241-329 (369)
264 3gru_A Dimethyladenosine trans 96.1 0.0023 7.9E-08 53.2 2.2 50 2-51 78-127 (295)
265 3v97_A Ribosomal RNA large sub 95.5 0.015 5.1E-07 54.2 5.6 74 2-75 262-347 (703)
266 2zig_A TTHA0409, putative modi 95.5 0.0039 1.3E-07 51.8 1.5 56 20-75 20-97 (297)
267 3axs_A Probable N(2),N(2)-dime 95.5 0.0031 1.1E-07 54.5 0.8 70 2-75 83-158 (392)
268 2ar0_A M.ecoki, type I restric 95.5 0.006 2E-07 55.1 2.5 74 2-75 217-312 (541)
269 2b9e_A NOL1/NOP2/SUN domain fa 95.5 0.0083 2.8E-07 50.2 3.3 74 2-76 133-235 (309)
270 3cvo_A Methyltransferase-like 95.2 0.016 5.4E-07 45.3 3.8 68 2-74 57-153 (202)
271 2dul_A N(2),N(2)-dimethylguano 94.8 0.0021 7.3E-08 55.3 -2.4 70 2-75 77-164 (378)
272 3gcz_A Polyprotein; flavivirus 94.5 0.03 1E-06 45.8 3.8 57 21-77 139-203 (282)
273 1qyr_A KSGA, high level kasuga 94.4 0.008 2.7E-07 48.8 0.3 46 2-47 49-99 (252)
274 4gqb_A Protein arginine N-meth 94.3 0.016 5.5E-07 53.1 2.1 69 2-72 391-464 (637)
275 1boo_A Protein (N-4 cytosine-s 94.3 0.012 4E-07 49.5 1.2 56 20-75 13-84 (323)
276 3c6k_A Spermine synthase; sper 93.6 0.022 7.6E-07 48.8 1.5 75 1-75 233-331 (381)
277 3lkd_A Type I restriction-modi 93.1 0.11 3.6E-06 46.9 5.2 75 2-76 254-359 (542)
278 3tqs_A Ribosomal RNA small sub 93.0 0.027 9.1E-07 45.7 1.1 45 2-47 57-105 (255)
279 3eld_A Methyltransferase; flav 92.7 0.41 1.4E-05 39.4 7.7 56 21-77 130-193 (300)
280 2qy6_A UPF0209 protein YFCK; s 92.3 0.047 1.6E-06 44.3 1.6 53 20-72 150-210 (257)
281 2hwk_A Helicase NSP2; rossman 91.9 0.31 1.1E-05 39.8 5.9 43 37-79 205-258 (320)
282 3fut_A Dimethyladenosine trans 91.4 0.044 1.5E-06 44.9 0.5 47 2-49 74-121 (271)
283 3khk_A Type I restriction-modi 91.2 0.13 4.6E-06 46.3 3.5 74 2-75 289-395 (544)
284 2uyo_A Hypothetical protein ML 90.7 0.68 2.3E-05 38.5 7.2 103 20-124 153-274 (310)
285 3vyw_A MNMC2; tRNA wobble urid 90.5 0.3 1E-05 40.6 4.7 74 21-127 167-246 (308)
286 3ll7_A Putative methyltransfer 89.8 0.027 9.3E-07 48.9 -2.2 44 2-45 121-170 (410)
287 3ua3_A Protein arginine N-meth 89.0 0.05 1.7E-06 50.2 -1.2 52 20-72 472-531 (745)
288 3r24_A NSP16, 2'-O-methyl tran 88.8 0.43 1.5E-05 39.4 4.3 54 23-77 155-219 (344)
289 3ftd_A Dimethyladenosine trans 87.5 1.5 5.1E-05 35.0 6.8 43 2-47 60-104 (249)
290 2km1_A Protein DRE2; yeast, an 87.5 0.46 1.6E-05 34.4 3.3 41 33-73 54-96 (136)
291 2r6z_A UPF0341 protein in RSP 87.3 0.016 5.5E-07 47.1 -5.1 50 2-51 111-174 (258)
292 1m6y_A S-adenosyl-methyltransf 87.0 0.053 1.8E-06 45.1 -2.2 45 2-46 56-106 (301)
293 1rjd_A PPM1P, carboxy methyl t 86.7 0.42 1.4E-05 40.2 3.2 98 20-122 167-281 (334)
294 2oyr_A UPF0341 protein YHIQ; a 86.6 0.15 5E-06 41.4 0.3 67 2-69 116-194 (258)
295 4fzv_A Putative methyltransfer 85.6 0.17 5.9E-06 43.0 0.3 75 2-76 178-285 (359)
296 2px2_A Genome polyprotein [con 84.7 3.2 0.00011 33.5 7.2 53 23-78 125-186 (269)
297 1eg2_A Modification methylase 83.7 0.56 1.9E-05 39.2 2.6 54 22-75 39-106 (319)
298 2wk1_A NOVP; transferase, O-me 83.4 0.47 1.6E-05 38.9 1.9 55 20-76 189-245 (282)
299 3s1s_A Restriction endonucleas 83.3 1.7 5.8E-05 41.0 5.7 75 2-76 354-466 (878)
300 4auk_A Ribosomal RNA large sub 81.2 11 0.00039 31.9 9.7 51 20-74 252-304 (375)
301 3uzu_A Ribosomal RNA small sub 80.0 0.32 1.1E-05 39.8 -0.2 43 2-46 74-122 (279)
302 1g60_A Adenine-specific methyl 76.1 1.3 4.3E-05 35.6 2.3 53 23-75 6-74 (260)
303 3trk_A Nonstructural polyprote 68.0 1.8 6.3E-05 35.0 1.3 43 36-78 209-262 (324)
304 3p8z_A Mtase, non-structural p 65.3 32 0.0011 27.5 7.9 58 19-80 126-191 (267)
305 3tos_A CALS11; methyltransfera 63.6 2.2 7.6E-05 34.3 1.1 56 20-77 158-219 (257)
306 3lkz_A Non-structural protein 63.5 36 0.0012 28.0 8.2 57 20-79 143-208 (321)
307 1wg8_A Predicted S-adenosylmet 60.6 4.5 0.00015 33.0 2.4 25 53-77 211-235 (285)
308 1wg8_A Predicted S-adenosylmet 58.7 3 0.0001 34.1 1.0 43 2-46 50-97 (285)
309 3tka_A Ribosomal RNA small sub 58.7 4.8 0.00016 33.8 2.3 25 53-77 252-276 (347)
310 3iei_A Leucine carboxyl methyl 58.6 78 0.0027 26.2 12.5 102 20-125 163-277 (334)
311 2oo3_A Protein involved in cat 54.5 17 0.00059 29.6 4.9 74 2-75 119-198 (283)
312 4gua_A Non-structural polyprot 51.3 7.8 0.00027 34.8 2.4 43 36-78 219-272 (670)
313 1m6y_A S-adenosyl-methyltransf 46.5 8.4 0.00029 31.6 1.9 25 53-77 223-247 (301)
314 1pqw_A Polyketide synthase; ro 42.6 14 0.00048 27.6 2.5 31 37-74 106-136 (198)
315 2zwa_A Leucine carboxyl methyl 41.9 1.4E+02 0.0049 27.2 9.6 98 21-124 189-304 (695)
316 3ufb_A Type I restriction-modi 41.2 27 0.00092 31.1 4.4 73 3-75 261-362 (530)
317 2g7j_A Putative cytoplasmic pr 30.6 63 0.0021 22.0 3.8 21 108-128 4-24 (124)
318 3g2e_A OORC subunit of 2-oxogl 28.2 1.1E+02 0.0036 23.1 5.4 31 37-75 69-99 (194)
319 3pvc_A TRNA 5-methylaminomethy 27.2 62 0.0021 29.5 4.6 52 21-72 149-208 (689)
320 1whz_A Hypothetical protein; a 26.2 96 0.0033 18.8 4.0 28 108-135 6-33 (70)
321 1kol_A Formaldehyde dehydrogen 25.7 45 0.0015 28.0 3.1 38 37-74 253-299 (398)
322 1v3u_A Leukotriene B4 12- hydr 25.6 37 0.0013 27.7 2.5 31 37-74 213-243 (333)
323 1pl8_A Human sorbitol dehydrog 20.9 90 0.0031 25.6 4.0 32 37-74 241-272 (356)
324 3ps9_A TRNA 5-methylaminomethy 20.4 1E+02 0.0035 27.9 4.6 51 21-72 157-216 (676)
No 1
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=3.1e-21 Score=158.89 Aligned_cols=192 Identities=16% Similarity=0.089 Sum_probs=135.5
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCCcH
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGETL 81 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~~~ 81 (245)
+|+|+.|++.|+++. +++.|+++|+++++ .+++||+|+|+.++||++|+..++++++++|||||++++++++....
T Consensus 63 ~D~s~~~~~~a~~~~---~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 138 (259)
T 2p35_A 63 IDSDDDMLEKAADRL---PNTNFGKADLATWK-PAQKADLLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQMPDNLQE 138 (259)
T ss_dssp EESCHHHHHHHHHHS---TTSEEEECCTTTCC-CSSCEEEEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEEECCTTS
T ss_pred EECCHHHHHHHHHhC---CCcEEEECChhhcC-ccCCcCEEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEeCCCCCc
Confidence 799999999998773 47999999999998 67899999999999999999999999999999999999987654221
Q ss_pred HHHHHHHHHH-HHHhcC----CCCCcccCCCCHHHHHHHHHhCCCeeeEEEEEeEEEeCCCHHHHHHHHhcccccccccc
Q psy16312 82 YELRSAVHLA-EMERRG----GVASHISPFTQIRDVGSLLTRAGFNMLTIDVDEIVIHYPSMFELMWDLKGMGESNACVN 156 (245)
Q Consensus 82 ~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 156 (245)
.. ...+... ....+. ...+...++.+.+++.++|+++||.+.. ........+++...++++++.+|.......
T Consensus 139 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 216 (259)
T 2p35_A 139 PT-HIAMHETADGGPWKDAFSGGGLRRKPLPPPSDYFNALSPKSSRVDV-WHTVYNHPMKDADSIVEWVKGTGLRPYLAA 216 (259)
T ss_dssp HH-HHHHHHHHHHSTTGGGC-------CCCCCHHHHHHHHGGGEEEEEE-EEEEEEEEESCHHHHHHHHTTTTTTHHHHT
T ss_pred HH-HHHHHHHhcCcchHHHhccccccccCCCCHHHHHHHHHhcCCceEE-EEEEeeeccCCchHHhhhhhcCcchHHHHh
Confidence 11 1111110 000111 0012234577899999999999997543 334556678899999999998874332211
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCCceeceeEEEEEEEeeCC
Q psy16312 157 RSLHFPLELQYASAAIYEKYYGKPNDDKNGGGTCVPATFQIIYLVAWKP 205 (245)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~~~~~~~~~~~~~a~Kp 205 (245)
......+.++.++.+.+++.+... .+ |. +.+++.+++++|+||
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~-~~----g~-~~~~~~~~~~~a~Kp 259 (259)
T 2p35_A 217 AGEENREAFLADYTRRIAAAYPPM-AD----GR-LLLRFPRLFVVAVKK 259 (259)
T ss_dssp TCGGGHHHHHHHHHHHHHHHSCCC-TT----SC-EEEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHHhCCCC-CC----Ce-EEEEeeeEEEEEecC
Confidence 122223455566666666665421 35 77 999999999999997
No 2
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.85 E-value=4.2e-21 Score=160.24 Aligned_cols=190 Identities=18% Similarity=0.211 Sum_probs=137.3
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCCcH
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGETL 81 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~~~ 81 (245)
+|+|+.|++.|+++. +++.|.++|++.+++ +++||+|+|+.+++|++|+..++++++++|||||++++.+++..+.
T Consensus 85 vD~s~~~~~~a~~~~---~~~~~~~~d~~~~~~-~~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~~~~~~ 160 (279)
T 3ccf_A 85 TDNAATMIEKARQNY---PHLHFDVADARNFRV-DKPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFGGKGNI 160 (279)
T ss_dssp EESCHHHHHHHHHHC---TTSCEEECCTTTCCC-SSCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECTTTT
T ss_pred EECCHHHHHHHHhhC---CCCEEEECChhhCCc-CCCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEecCCcch
Confidence 799999999998876 479999999999998 4899999999999999999999999999999999999988776554
Q ss_pred HHHHHHHHHHHHHhcCC-C--CCcccCCCCHHHHHHHHHhCCCeeeEEEEEeEEEeCC-CHHHHHHHHhccccccccccC
Q psy16312 82 YELRSAVHLAEMERRGG-V--ASHISPFTQIRDVGSLLTRAGFNMLTIDVDEIVIHYP-SMFELMWDLKGMGESNACVNR 157 (245)
Q Consensus 82 ~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~~~~~~~~-~~~~~~~~l~~~g~~~~~~~~ 157 (245)
..+...+.... ...+. . ......+.+..++.++|+++||+++.+........++ +...+..++..++.... ...
T Consensus 161 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~ 238 (279)
T 3ccf_A 161 KYILEALYNAL-ETLGIHNPQALNPWYFPSIGEYVNILEKQGFDVTYAALFNRPTTLAEGEFGMANWIQMFASAFL-VGL 238 (279)
T ss_dssp HHHHHHHHHHH-HHHTCCCGGGGCCCCCCCHHHHHHHHHHHTEEEEEEEEEECCEECSSGGGHHHHHHHHHCHHHH-TTC
T ss_pred HHHHHHHHHHH-HhcCCccccCcCceeCCCHHHHHHHHHHcCCEEEEEEEecccccccCCHHHHHHHHHHhhHHHh-ccC
Confidence 44433332221 11111 0 1112245688999999999999998887777666776 56667777766553211 111
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCCCCCceeceeEEEEEEEeeCC
Q psy16312 158 SLHFPLELQYASAAIYEKYYGKPNDDKNGGGTCVPATFQIIYLVAWKP 205 (245)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~~~~~~~~~~~~~a~Kp 205 (245)
.....+.+++++.+.++..+. .+ |. +.++|.+++++|+||
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~---~~----g~-~~~~~~~~~v~a~Kp 278 (279)
T 3ccf_A 239 TPDQQVQLIRKVEATLQDKLY---HQ----ES-WTADYRRIRIVSIKA 278 (279)
T ss_dssp CHHHHHHHHHHHHHHHHHHHE---ET----TE-EEECCEEEEEEEEEC
T ss_pred CHHHHHHHHHHHHHHHHhhcc---CC----Cc-EEEEEEEEEEEEecC
Confidence 111223444555555555443 45 87 999999999999998
No 3
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.83 E-value=2.6e-20 Score=153.71 Aligned_cols=186 Identities=17% Similarity=0.157 Sum_probs=127.0
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCC
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGE 79 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~ 79 (245)
+|+|+.|++.|+++.. +.+++.|+++|++++|+++++||+|+|+.++||++|+..+|++++++|||||++++..+...
T Consensus 65 vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~~ 144 (260)
T 1vl5_A 65 FDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSAP 144 (260)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEBC
T ss_pred EeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCCC
Confidence 7999999999987642 22479999999999999889999999999999999999999999999999999988653322
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEEEeEEEeCCCHHHHHHHHhccccccccccCCC
Q psy16312 80 TLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDVDEIVIHYPSMFELMWDLKGMGESNACVNRSL 159 (245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 159 (245)
........+....... .+....+.+..++.++|+++||+++.+......+.+.+ ++..++......
T Consensus 145 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~~~~~~------~~~~~~~~~~~~---- 210 (260)
T 1vl5_A 145 ENDAFDVFYNYVEKER----DYSHHRAWKKSDWLKMLEEAGFELEELHCFHKTFIFED------WCDRMNVTTEKK---- 210 (260)
T ss_dssp SSHHHHHHHHHHHHHH----CTTCCCCCBHHHHHHHHHHHTCEEEEEEEEEEEEEHHH------HHHHTTCCHHHH----
T ss_pred CCHHHHHHHHHHHHhc----CccccCCCCHHHHHHHHHHCCCeEEEEEEeeccCCHHH------HHHhcCCCHHHH----
Confidence 2122222222111111 11223456889999999999999988887766665533 223333222110
Q ss_pred CCCHHHHHHHHHHHHHHhCC-CCCCCCCCCceeceeEEEEEEEeeCCC
Q psy16312 160 HFPLELQYASAAIYEKYYGK-PNDDKNGGGTCVPATFQIIYLVAWKPD 206 (245)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~-~~~d~~~~g~~~~~~~~~~~~~a~Kp~ 206 (245)
...+..+.++.+.+++.|.. . .+ |..+.+++.+++++|+||.
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~-~~----g~~~~~~~~~~~~~a~k~~ 253 (260)
T 1vl5_A 211 QELSDFIKSKPTEYYQKFKIVV-ED----GRVYSFRGESILMKARKPT 253 (260)
T ss_dssp HHHHHHHHTSCHHHHHHTTCEE-ET----TEEEEEEEEEEEEEEECCC
T ss_pred HHHHHHHHhCcHHHHHHcceec-cC----CCcceEEeeEEEEEEEccc
Confidence 01123344444677777753 2 34 5216899999999999996
No 4
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.82 E-value=2.9e-19 Score=147.22 Aligned_cols=194 Identities=15% Similarity=0.095 Sum_probs=132.8
Q ss_pred CcChHHHHHhhCCCCC-CCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCC--
Q psy16312 2 CDNCESILSQAEPPED-TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGG-- 78 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~-~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~-- 78 (245)
+|+|+.|++.|++++. ..+++.+.++|++++++++++||+|+++.++||++|+..++++++++|||||++++.....
T Consensus 67 vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 146 (263)
T 2yqz_A 67 LDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEGWDQAEA 146 (263)
T ss_dssp EESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEEEECC
T ss_pred EECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEEecCCCc
Confidence 7999999999988752 2368999999999999888999999999999999999999999999999999998873222
Q ss_pred CcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEEEeEEEeCCCHHHHHHHHhccccccccccCC
Q psy16312 79 ETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDVDEIVIHYPSMFELMWDLKGMGESNACVNRS 158 (245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 158 (245)
.....+...+.... ...+...+....+.+..++.++|+++||+++.+........ .+..++++.+...... ......
T Consensus 147 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~ 223 (263)
T 2yqz_A 147 SPEWTLQERWRAFA-AEEGFPVERGLHAKRLKEVEEALRRLGLKPRTREVARWREE-RTPREALEALSERLYS-FTQGLP 223 (263)
T ss_dssp CHHHHHHHHHHHHH-HHHTCCCCCCHHHHHHHHHHHHHHHTTCCCEEEEEEEEEEE-ECHHHHHHHHHTTCSG-GGSSSC
T ss_pred cHHHHHHHHHHHHH-HHhCCCcccccccCCHHHHHHHHHHcCCCcceEEEeeeecC-CCHHHHHHHHHHhhcc-cccCCC
Confidence 12112222222111 11121111122345778899999999999877665555544 3678888877653321 111111
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCCCCceeceeEEEEEEEeeCC
Q psy16312 159 LHFPLELQYASAAIYEKYYGKPNDDKNGGGTCVPATFQIIYLVAWKP 205 (245)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~~~~~~~~~~~~~a~Kp 205 (245)
....+.+++++.+.+++.+.. .+ +. +.+++..++++||||
T Consensus 224 ~~~~~~~~~~~~~~l~~~~~~--~~----~~-~~~~~~~~~~~~rkp 263 (263)
T 2yqz_A 224 EPVHARVMERLWAWAEAELGD--LD----RP-FPVEKRFLLRVSRLG 263 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHSSC--TT----SC-EEEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHhcCC--cC----cc-ccccceeEEEeeecC
Confidence 112234455555666666654 44 66 899999999999998
No 5
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.75 E-value=1.6e-17 Score=135.43 Aligned_cols=187 Identities=15% Similarity=0.145 Sum_probs=127.9
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCC
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGE 79 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~ 79 (245)
+|+|+.|++.|++++. +..++.++++|++++++++++||+|+|..+++|++|+..++++++++|||||++++..+...
T Consensus 49 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 128 (239)
T 1xxl_A 49 VDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAP 128 (239)
T ss_dssp EESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred EECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCC
Confidence 7999999999987643 12479999999999999889999999999999999999999999999999999988754332
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEEEeEEEeCCCHHHHHHHHhccccccccccCCC
Q psy16312 80 TLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDVDEIVIHYPSMFELMWDLKGMGESNACVNRSL 159 (245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 159 (245)
........+....... .+......+..++.++|+++||+++.+......+.+.++.+.+ .. .... .
T Consensus 129 ~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ll~~aGf~~~~~~~~~~~~~~~~w~~~~---~~---~~~~----~ 194 (239)
T 1xxl_A 129 EDPVLDEFVNHLNRLR----DPSHVRESSLSEWQAMFSANQLAYQDIQKWNLPIQYDSWIKRG---GT---PADR----E 194 (239)
T ss_dssp SSHHHHHHHHHHHHHH----CTTCCCCCBHHHHHHHHHHTTEEEEEEEEEEEEEEHHHHHHHH---TC---CHHH----H
T ss_pred CChhHHHHHHHHHHhc----cccccCCCCHHHHHHHHHHCCCcEEEEEeecCccCHHHHHHHc---CC---CHHH----H
Confidence 2233332222211111 1111235678999999999999998887766666664433322 11 1000 0
Q ss_pred CCCHHHHHHHHHHHHHHhCCC-CCCCCCCCceeceeEEEEEEEeeCCC
Q psy16312 160 HFPLELQYASAAIYEKYYGKP-NDDKNGGGTCVPATFQIIYLVAWKPD 206 (245)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~-~~d~~~~g~~~~~~~~~~~~~a~Kp~ 206 (245)
...+..+.++.+.+++.|... +.+ |+.+.+++..+++.|.|..
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~----G~~~~~t~~~~~~~~~k~~ 238 (239)
T 1xxl_A 195 KQIITHLNHASDEARDTFCITLNQN----GQPISFCLKAILIQGIKRE 238 (239)
T ss_dssp HHHHHHHHTCCHHHHHHTTCEECTT----SCEEEEEEEEEEEEEEECB
T ss_pred HHHHHHHHhCCHHHHHHhCeeecCC----CCceeEEeeeeehehhccC
Confidence 011344455556777777641 024 6523799999999988853
No 6
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.71 E-value=6e-17 Score=133.66 Aligned_cols=183 Identities=20% Similarity=0.179 Sum_probs=117.0
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCCcH
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGETL 81 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~~~ 81 (245)
+|+|+.||+.|+++ +++.|+++|++++|+++++||+|+|..++||+ ++..++++++|+|||||+|++..++....
T Consensus 67 vD~s~~ml~~a~~~----~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~-~~~~~~~e~~rvLkpgG~l~~~~~~~~~~ 141 (257)
T 4hg2_A 67 VDPGEAQIRQALRH----PRVTYAVAPAEDTGLPPASVDVAIAAQAMHWF-DLDRFWAELRRVARPGAVFAAVTYGLTRV 141 (257)
T ss_dssp EESCHHHHHTCCCC----TTEEEEECCTTCCCCCSSCEEEEEECSCCTTC-CHHHHHHHHHHHEEEEEEEEEEEECCCBC
T ss_pred EeCcHHhhhhhhhc----CCceeehhhhhhhcccCCcccEEEEeeehhHh-hHHHHHHHHHHHcCCCCEEEEEECCCCCC
Confidence 79999999999764 47999999999999999999999999999999 78899999999999999998877654332
Q ss_pred -HHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhC--CCeeeEEEEEeEEEeCCCHHHHHHHHhccccccccccCC
Q psy16312 82 -YELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRA--GFNMLTIDVDEIVIHYPSMFELMWDLKGMGESNACVNRS 158 (245)
Q Consensus 82 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a--GF~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~ 158 (245)
+++...+..... ....+...+ ....+....... .|..+......+...+ +..+++..++...+..... .
T Consensus 142 ~~~~~~~~~~~~~---~~~~~~~~~--~~~~~~~~y~~l~~pf~~~~~~~~~~~~~~-tl~~~~~~l~T~S~~~~~~-~- 213 (257)
T 4hg2_A 142 DPEVDAVVDRLYH---GLLARDWPP--ERVHVESGYRTLPFPFPELEAPPLEIEERW-PMDAFLGYLGTWSAVTAHR-R- 213 (257)
T ss_dssp CHHHHHHHHHHHH---TTTGGGCCS--CCHHHHTTTTTSCCCSCEECCCCCEEEEEE-CHHHHHHHHTTSHHHHHHH-H-
T ss_pred CHHHHHHHHHHHh---cccccccch--hhhHHHhhhhhCCCCCccceeeEEEEEEEe-cHHHHHHHHHHHHHHHHHH-H-
Confidence 333333322110 111111111 111111111221 2333222222222222 5677777776544322211 1
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCCCCCCCCCceeceeEEEEEEEeeCC
Q psy16312 159 LHFPLELQYASAAIYEKYYGKPNDDKNGGGTCVPATFQIIYLVAWKP 205 (245)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~~~~~~~~~~~~~a~Kp 205 (245)
....+.+.++.+.+++.++. .+ +. +.++|.+++.++|.+
T Consensus 214 -~~~~d~l~~~~~~l~~~~g~--~~----~~-~~v~~pi~l~~Grv~ 252 (257)
T 4hg2_A 214 -RTGADPLAEIAPALRAAWGT--PE----RP-LRVTWPIAIRAGRIL 252 (257)
T ss_dssp -HHSSCHHHHHHHHHHHHHSS--TT----SC-EEEEEEEEEEEEESS
T ss_pred -HcCccHHHHHHHHHHHhcCC--CC----cE-EEEEEEEEEEEEEEC
Confidence 11134677788888888876 55 66 889999999999875
No 7
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.67 E-value=9.6e-16 Score=127.25 Aligned_cols=188 Identities=14% Similarity=0.045 Sum_probs=120.4
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCC
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGE 79 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~ 79 (245)
+|+|+.|++.|++++. +.+++.|.++|+..+++++++||+|+++.+++|++|+..++++++++|||||++++..+...
T Consensus 67 vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 146 (276)
T 3mgg_A 67 IDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDHG 146 (276)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECGG
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCCC
Confidence 7999999999988643 22479999999999999889999999999999999999999999999999999988764321
Q ss_pred c------HHHHHHHHHHH-HHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEEEeEEEeCCCHHHHH--------HH
Q psy16312 80 T------LYELRSAVHLA-EMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDVDEIVIHYPSMFELM--------WD 144 (245)
Q Consensus 80 ~------~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~~~~~~~~~~~~~~--------~~ 144 (245)
+ .......+... ...... .....+...+.++|+++||+++.+...........+.... ..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~l~~aGf~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (276)
T 3mgg_A 147 SCYFHPEGKKAIEAWNCLIRVQAYM-----KGNSLVGRQIYPLLQESGFEKIRVEPRMVYIDSSKPELVDGFILKTIIPM 221 (276)
T ss_dssp GCEEESCCHHHHHHHHHHHHHHHHT-----TCCTTGGGGHHHHHHHTTCEEEEEEEEEEEECTTCHHHHHHTTTTTHHHH
T ss_pred CceECCCcHHHHHHHHHHHHHHHhc-----CCCcchHHHHHHHHHHCCCCeEEEeeEEEECCCCChHHHHHHHHHHHHHH
Confidence 1 11121222111 001100 1122356789999999999998888665554443332111 11
Q ss_pred HhccccccccccCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCCceeceeEEEEEEEeeCCC
Q psy16312 145 LKGMGESNACVNRSLHFPLELQYASAAIYEKYYGKPNDDKNGGGTCVPATFQIIYLVAWKPD 206 (245)
Q Consensus 145 l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~~~~~~~~~~~~~a~Kp~ 206 (245)
+..++... ...+..+++.+.++.+.+++... ++ |. +..+| .-.+.++||+
T Consensus 222 ~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~---~~----g~-~~~tf-~~~~~~~~~~ 271 (276)
T 3mgg_A 222 VEGVKEQS---LKMQIIKEEEWEKGIEELHKTAE---HG----GT-FCYTF-FKGWGTKEGH 271 (276)
T ss_dssp HHTTHHHH---HHTTSSCHHHHHHHHHHHHHTTS---TT----CE-EEEEE-EEEEEEC---
T ss_pred HHHHHHHH---HHcCCCCHHHHHHHHHHHHhccC---CC----eE-EEEEE-EEEEEecccc
Confidence 12222111 11344578888888888876543 45 64 44333 2235677775
No 8
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.64 E-value=6.5e-15 Score=119.75 Aligned_cols=120 Identities=10% Similarity=0.012 Sum_probs=92.4
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHH-hhhcCCcEEEEEecCCCc
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVL-KCLRQDGVFLASIFGGET 80 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~-r~LkpGG~l~~~~~~~~~ 80 (245)
+|+|+.|++.|+++... +++|+++|++++ +++++||+|+|..+|+|++|+..+|++++ ++|||||+++++++....
T Consensus 70 vD~s~~~~~~a~~~~~~--~v~~~~~d~~~~-~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~~~~ 146 (250)
T 2p7i_A 70 VEASEEAISHAQGRLKD--GITYIHSRFEDA-QLPRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPNANA 146 (250)
T ss_dssp EESCHHHHHHHHHHSCS--CEEEEESCGGGC-CCSSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEECTTC
T ss_pred EeCCHHHHHHHHHhhhC--CeEEEEccHHHc-CcCCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCChHH
Confidence 79999999999988763 799999999988 45689999999999999999999999999 999999999999876655
Q ss_pred HHHHHHHHHHHHHHhcCCC--------CCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 81 LYELRSAVHLAEMERRGGV--------ASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
.......+. ...... ......+.+..++.++|+++||+++.+..
T Consensus 147 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 198 (250)
T 2p7i_A 147 VSRQIAVKM----GIISHNSAVTEAEFAHGHRCTYALDTLERDASRAGLQVTYRSG 198 (250)
T ss_dssp HHHHHHHHT----TSSSSTTCCCHHHHHTTCCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHc----CccccchhcccccccccccccCCHHHHHHHHHHCCCeEEEEee
Confidence 433221110 000000 01112356899999999999999876653
No 9
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.63 E-value=3.1e-16 Score=129.16 Aligned_cols=119 Identities=18% Similarity=0.199 Sum_probs=92.8
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeeccccccc--CChhHHHHHHHhhhcCCcEEEEEecCCC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWV--NNLPGCFQQVLKCLRQDGVFLASIFGGE 79 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~--~d~~~~l~~i~r~LkpGG~l~~~~~~~~ 79 (245)
+|+|+.|++.|+++.....+++++++|+.++++++++||+|+|+.+++|+ +++..++++++++|||||++++..+...
T Consensus 84 vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 163 (266)
T 3ujc_A 84 IDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCAT 163 (266)
T ss_dssp EESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEES
T ss_pred EeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 79999999999998765468999999999999988999999999999999 8899999999999999999998865433
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 80 TLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
....+...+.... . +....+.+..++.++|+++||+++.+.
T Consensus 164 ~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 204 (266)
T 3ujc_A 164 EKENWDDEFKEYV-K------QRKYTLITVEEYADILTACNFKNVVSK 204 (266)
T ss_dssp CGGGCCHHHHHHH-H------HHTCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred CcccchHHHHHHH-h------cCCCCCCCHHHHHHHHHHcCCeEEEEE
Confidence 2111111111110 1 112245688999999999999986655
No 10
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.61 E-value=1.2e-15 Score=126.45 Aligned_cols=179 Identities=15% Similarity=0.099 Sum_probs=117.3
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCC
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGG 78 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~ 78 (245)
+|+|+.|++.|+++... ..++.++++|+.++|+++++||+|+|..+++|++++..++++++++|||||++++..+..
T Consensus 90 vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 169 (273)
T 3bus_A 90 ISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVL 169 (273)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred EeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeec
Confidence 79999999999876431 246999999999999988999999999999999999999999999999999998876432
Q ss_pred C-cHHH-HHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEEEeEEEeCCCHHHHHHHHhcccccccccc
Q psy16312 79 E-TLYE-LRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDVDEIVIHYPSMFELMWDLKGMGESNACVN 156 (245)
Q Consensus 79 ~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~ 156 (245)
. +... ....+.... .. .....+.+..++.++++++||+++.+...... .........+.+......
T Consensus 170 ~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~----- 237 (273)
T 3bus_A 170 LAPVEGAKKEAVDAFR-AG-----GGVLSLGGIDEYESDVRQAELVVTSTVDISAQ-ARPSLVKTAEAFENARSQ----- 237 (273)
T ss_dssp SSCCCHHHHHHHHHHH-HH-----HTCCCCCCHHHHHHHHHHTTCEEEEEEECHHH-HTTHHHHHHHHHHHTHHH-----
T ss_pred cCCCChhHHHHHHHHH-hh-----cCccCCCCHHHHHHHHHHcCCeEEEEEECcHh-HHHHHHHHHHHHHHhHHH-----
Confidence 1 1111 111111110 00 11234678899999999999998765542211 122333333333221100
Q ss_pred CCCCCCHHHHHHHHHHHHHHhCCCCCCCCCCCceeceeEEEEEEEeeCC
Q psy16312 157 RSLHFPLELQYASAAIYEKYYGKPNDDKNGGGTCVPATFQIIYLVAWKP 205 (245)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~~~~~~~~~~~~~a~Kp 205 (245)
......++.++.+.+.++..+.. +. +...+++|+||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~--------~~-----~~~~~~~~~kp 273 (273)
T 3bus_A 238 VEPFMGAEGLDRMIATFRGLAEV--------PE-----AGYVLIGARKP 273 (273)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHTC--------TT-----EEEEEEEEECC
T ss_pred HHhhcCHHHHHHHHHHHHHHhhC--------CC-----eeEEEEEEECC
Confidence 00123356677777777765432 32 34466789997
No 11
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.59 E-value=1.7e-15 Score=127.04 Aligned_cols=184 Identities=10% Similarity=0.068 Sum_probs=113.1
Q ss_pred CcChHHHHHhhCCCCC---CCCcee--EEEcCCCCCC------CCCCccceeeecccccccCChhHHHHHHHhhhcCCcE
Q psy16312 2 CDNCESILSQAEPPED---TEVIYE--KKFVDEEHLP------FAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGV 70 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~---~~~~i~--f~~~D~~~l~------~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~ 70 (245)
+|+|++|++.|++++. ...++. +.++++++++ +++++||+|+|+.+|||++|+..+|++++++|||||+
T Consensus 88 vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~ 167 (292)
T 2aot_A 88 VEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAK 167 (292)
T ss_dssp ECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTTTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEE
T ss_pred EeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcE
Confidence 7999999999987642 223444 4556665543 5678999999999999999999999999999999999
Q ss_pred EEEEecCCCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEEEeEEEeCC------C--HHHHH
Q psy16312 71 FLASIFGGETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDVDEIVIHYP------S--MFELM 142 (245)
Q Consensus 71 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~~~~~~~~------~--~~~~~ 142 (245)
+++....+... +...+... ....+ ......+.+..++.++|+++||+++...... .+... + ...++
T Consensus 168 l~i~~~~~~~~--~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~l~~aGf~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 241 (292)
T 2aot_A 168 MLIIVVSGSSG--WDKLWKKY-GSRFP--QDDLCQYITSDDLTQMLDNLGLKYECYDLLS-TMDISDCFIDGNENGDLLW 241 (292)
T ss_dssp EEEEEECTTSH--HHHHHHHH-GGGSC--CCTTCCCCCHHHHHHHHHHHTCCEEEEEECC-EEECGGGGSTTCHHHHHHH
T ss_pred EEEEEecCCcc--HHHHHHHH-HHhcc--CCCcccCCCHHHHHHHHHHCCCceEEEEecc-ccchhhccCCCCccHHHHH
Confidence 99876554321 11122111 01111 1123356788999999999999876533221 22211 1 12334
Q ss_pred HHHhccccccccccCCCCCCHHHHHHHHHHHHH-HhCCCCCCCCCCCceeceeEEEEEEEee
Q psy16312 143 WDLKGMGESNACVNRSLHFPLELQYASAAIYEK-YYGKPNDDKNGGGTCVPATFQIIYLVAW 203 (245)
Q Consensus 143 ~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~g~~~~~~~~~~~~~a~ 203 (245)
.++..... . ....+++..+.+.+.+++ .+.. ..+ |+ +.++....++++.
T Consensus 242 ~~l~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~-~~d----G~-~~~~~~~~~~~~~ 291 (292)
T 2aot_A 242 DFLTETCN----F--NATAPPDLRAELGKDLQEPEFSA-KKE----GK-VLFNNTLSFIVIE 291 (292)
T ss_dssp HHHHTBSS----H--HHHSCHHHHHHHHHHTTSTTTEE-EET----TE-EEEECCEEEEEEE
T ss_pred HHHHhCCc----c--ccCCCHHHHHHHHHHHhcccccc-ccC----Ce-EEecCCceEEEee
Confidence 44432210 0 012335555556555554 2211 135 88 8888888877765
No 12
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=99.58 E-value=4.6e-15 Score=115.11 Aligned_cols=99 Identities=14% Similarity=0.147 Sum_probs=81.2
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCC---CCCccceeeeccccccc-CChhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPF---AENSVDLLISNLALHWV-NNLPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~---~~~~FD~Vis~~~l~~~-~d~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+|+|+.|++.|+++... +++|+++|++++++ ++++||+|+|+.++||+ +|+..++++++++|||||++++....
T Consensus 26 vD~s~~ml~~a~~~~~~--~~~~~~~d~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 103 (176)
T 2ld4_A 26 VEALKGLVDKLQALTGN--EGRVSVENIKQLLQSAHKESSFDIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPV 103 (176)
T ss_dssp HHHHHHHHHHHHHHTTT--TSEEEEEEGGGGGGGCCCSSCEEEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eeCCHHHHHHHHHhccc--CcEEEEechhcCccccCCCCCEeEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEccc
Confidence 69999999999988753 59999999999887 78899999999999999 99999999999999999999986421
Q ss_pred CCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCC
Q psy16312 78 GETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGF 121 (245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF 121 (245)
... ........+.+++.++|+++||
T Consensus 104 ~~~-------------------~~~~~~~~~~~~~~~~l~~aGf 128 (176)
T 2ld4_A 104 ETA-------------------VDNNSKVKTASKLCSALTLSGL 128 (176)
T ss_dssp ESS-------------------SCSSSSSCCHHHHHHHHHHTTC
T ss_pred ccc-------------------cccccccCCHHHHHHHHHHCCC
Confidence 100 0001112467899999999999
No 13
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.57 E-value=7.7e-15 Score=122.46 Aligned_cols=126 Identities=16% Similarity=0.219 Sum_probs=91.9
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCC-CCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLP-FAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~-~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+|+|+.|++.|++++.. ..+++++++|+++++ +.+++||+|+|..+++|++++..++++++++|||||++++.++.
T Consensus 96 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 175 (285)
T 4htf_A 96 CDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFYN 175 (285)
T ss_dssp EESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred EECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchhhcccCHHHHHHHHHHHcCCCeEEEEEEeC
Confidence 79999999999986532 257999999999988 77799999999999999999999999999999999999998765
Q ss_pred CCcHHHHHHH---HHHHHHHhcCC---CCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 78 GETLYELRSA---VHLAEMERRGG---VASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 78 ~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
.......... +... ...... .......+.+.+++.++|+++||+++....
T Consensus 176 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~aGf~v~~~~~ 231 (285)
T 4htf_A 176 AHGLLMHNMVAGNFDYV-QAGMPKKKKRTLSPDYPRDPTQVYLWLEEAGWQIMGKTG 231 (285)
T ss_dssp HHHHHHHHHHTTCHHHH-HTTCCCC----CCCSCCBCHHHHHHHHHHTTCEEEEEEE
T ss_pred CchHHHHHHHhcCHHHH-hhhccccccccCCCCCCCCHHHHHHHHHHCCCceeeeee
Confidence 4322111111 0000 000000 011122356889999999999999876654
No 14
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.56 E-value=1.8e-15 Score=127.21 Aligned_cols=190 Identities=10% Similarity=0.134 Sum_probs=120.8
Q ss_pred CcChHHHHHhhCCCCC----CCCceeEEEcCCCCCCCCC------CccceeeecccccccCChhHHHHHHHhhhcCCcEE
Q psy16312 2 CDNCESILSQAEPPED----TEVIYEKKFVDEEHLPFAE------NSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVF 71 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~----~~~~i~f~~~D~~~l~~~~------~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l 71 (245)
+|+|+.|++.|+++.. ...+++|+++|++++++.+ ++||+|+|+.++||+ ++..++++++++|||||++
T Consensus 67 vD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l 145 (299)
T 3g5t_A 67 SDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKIDMITAVECAHWF-DFEKFQRSAYANLRKDGTI 145 (299)
T ss_dssp EESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEE
T ss_pred EeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCeeEEeHhhHHHHh-CHHHHHHHHHHhcCCCcEE
Confidence 7999999999988632 1368999999999998876 899999999999999 9999999999999999999
Q ss_pred EEEecCCC---cHHHHHHHHHHHHHHhcCCCCCcccC-C--CCHHHHHHHHHhCCCe-----eeEEEEEeE---------
Q psy16312 72 LASIFGGE---TLYELRSAVHLAEMERRGGVASHISP-F--TQIRDVGSLLTRAGFN-----MLTIDVDEI--------- 131 (245)
Q Consensus 72 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~l~~aGF~-----~~~~~~~~~--------- 131 (245)
++..+... ....+...+.... +.. ....+ + +....+.+.++++||. .+.......
T Consensus 146 ~i~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~w~~p~~~~~~~~l~~~gfp~~~f~~v~~~~~~~~~~~~~~~~ 220 (299)
T 3g5t_A 146 AIWGYADPIFPDYPEFDDLMIEVP---YGK--QGLGPYWEQPGRSRLRNMLKDSHLDPELFHDIQVSYFCAEDVRDKVKL 220 (299)
T ss_dssp EEEEEEEEECTTCGGGTTHHHHHH---HCT--TTTGGGSCTTHHHHHHTTTTTCCCCTTTEEEEEEEEECGGGGGCHHHH
T ss_pred EEEecCCccccCcHHHHHHHHHhc---cCc--ccccchhhchhhHHHHHhhhccCCChHHcCcceEEEeccccccccccc
Confidence 87433211 1112222222111 010 01122 2 4566788899999994 332221111
Q ss_pred ---------EEeCCCHHHHHHHHhccccccccccC--CCCCCHHHHHHHHHH-HHHHhCCCCCCCCCCCceeceeEEEEE
Q psy16312 132 ---------VIHYPSMFELMWDLKGMGESNACVNR--SLHFPLELQYASAAI-YEKYYGKPNDDKNGGGTCVPATFQIIY 199 (245)
Q Consensus 132 ---------~~~~~~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~d~~~~g~~~~~~~~~~~ 199 (245)
....-+..+++.+++...+... +.. ......+.+.++.+. +++...-. .+ ++ +.+.|.+++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~l~t~s~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~----~~-~~~~w~~~~ 293 (299)
T 3g5t_A 221 HQHTKKPLLIRKQVTLVEFADYVRTWSAYHQ-WKQDPKNKDKEDVADWFIKESLRRRPELS-TN----TK-IEVVWNTFY 293 (299)
T ss_dssp HHCSSCCCCCEEEECHHHHHHHHTTSHHHHH-HHHCGGGTTSCCHHHHHHHHHHHHCTTCC-TT----CC-EEEEEEEEE
T ss_pred ccCCCCceeeeccccHHHHHHHHHHhHHHHH-HHhcccCCchhhHHHHHHHHHHHhccCCC-CC----CE-EEEEeccee
Confidence 0111245677777765543222 222 111112566666666 55533321 23 56 899999999
Q ss_pred EEeeC
Q psy16312 200 LVAWK 204 (245)
Q Consensus 200 ~~a~K 204 (245)
++|||
T Consensus 294 ~~~rk 298 (299)
T 3g5t_A 294 KLGKR 298 (299)
T ss_dssp EEEEE
T ss_pred eeEec
Confidence 99998
No 15
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.56 E-value=1.7e-15 Score=127.07 Aligned_cols=117 Identities=15% Similarity=0.099 Sum_probs=90.4
Q ss_pred CcChHHHHHhhCCCCC---CCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCC
Q psy16312 2 CDNCESILSQAEPPED---TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGG 78 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~---~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~ 78 (245)
+|+|+.|++.|+++.. ...+++++++|+.++|+++++||+|++..+++|++++..+|++++++|||||++++..+..
T Consensus 111 vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 190 (297)
T 2o57_A 111 LNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMK 190 (297)
T ss_dssp EESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEecc
Confidence 7999999999987642 1247999999999999988999999999999999999999999999999999998876432
Q ss_pred Cc---HHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 79 ET---LYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 79 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
.. .......+.. + ....+.+...+.++|+++||+++.+..
T Consensus 191 ~~~~~~~~~~~~~~~-----~-----~~~~~~~~~~~~~~l~~aGf~~~~~~~ 233 (297)
T 2o57_A 191 EDGIDKSSIQPILDR-----I-----KLHDMGSLGLYRSLAKECGLVTLRTFS 233 (297)
T ss_dssp CTTCCGGGGHHHHHH-----H-----TCSSCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred CCCCchHHHHHHHHH-----h-----cCCCCCCHHHHHHHHHHCCCeEEEEEE
Confidence 11 1111111211 0 112356889999999999999876553
No 16
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.55 E-value=2.5e-14 Score=115.74 Aligned_cols=125 Identities=16% Similarity=0.206 Sum_probs=91.7
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChh--HHHHHHHhhhcCCcEEEEEecCCC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLP--GCFQQVLKCLRQDGVFLASIFGGE 79 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~--~~l~~i~r~LkpGG~l~~~~~~~~ 79 (245)
+|+|+.|++.|+++.....++.++++|++++++. ++||+|+|+.+++|++++. .++++++++|||||++++..+...
T Consensus 74 vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 74 VDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFE-EKYDMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp EESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCC-SCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred EECCHHHHHHHHHhhccCCCEEEEeCchhccCCC-CCceEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 7999999999999876545899999999999987 8999999999999998776 599999999999999998875543
Q ss_pred cHHHHH----HHHHHHHHHhcCCC---------CCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 80 TLYELR----SAVHLAEMERRGGV---------ASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 80 ~~~~~~----~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
...... ..|... ....+.. ........+.+++.++|+++||+.+.+..
T Consensus 153 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aGF~~v~~~~ 213 (234)
T 3dtn_A 153 ETAFIENLNKTIWRQY-VENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAGFRDVSCIY 213 (234)
T ss_dssp SSHHHHHHHHHHHHHH-HHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTTCEEEEEEE
T ss_pred CChhhhhHHHHHHHHH-HHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcCCCceeeee
Confidence 322211 111111 0000100 01222356889999999999999876653
No 17
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.55 E-value=8.9e-15 Score=118.85 Aligned_cols=118 Identities=14% Similarity=0.212 Sum_probs=92.6
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCCcH
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGETL 81 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~~~ 81 (245)
+|+|+.|++.|+++... .+++++++|+.++++++++||+|+|..+++|++++..++++++++|+|||+++++++++...
T Consensus 81 vD~s~~~~~~a~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~ 159 (242)
T 3l8d_A 81 VDISEVMIQKGKERGEG-PDLSFIKGDLSSLPFENEQFEAIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILGPTAK 159 (242)
T ss_dssp EESCHHHHHHHHTTTCB-TTEEEEECBTTBCSSCTTCEEEEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEECTTCG
T ss_pred EECCHHHHHHHHhhccc-CCceEEEcchhcCCCCCCCccEEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcCCcch
Confidence 79999999999988643 68999999999999988999999999999999999999999999999999999988665432
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 82 YELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
.... .+. ..++ ........+..++.++++++||+++...
T Consensus 160 ~~~~-~~~----~~~~--~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 198 (242)
T 3l8d_A 160 PREN-SYP----RLYG--KDVVCNTMMPWEFEQLVKEQGFKVVDGI 198 (242)
T ss_dssp GGGG-GGG----GGGT--CCCSSCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred hhhh-hhh----hhcc--ccccccCCCHHHHHHHHHHcCCEEEEee
Confidence 2111 010 0011 1112335688999999999999986544
No 18
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.55 E-value=5.6e-15 Score=118.41 Aligned_cols=124 Identities=12% Similarity=0.081 Sum_probs=92.4
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChhH--HHHHHHhhhcCCcEEEEEecCCC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPG--CFQQVLKCLRQDGVFLASIFGGE 79 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~--~l~~i~r~LkpGG~l~~~~~~~~ 79 (245)
+|+|+.|++.|+++.. .+++++++|+.++++. ++||+|+|+.+++|++++.. +|++++++|||||++++..+...
T Consensus 73 vD~s~~~~~~a~~~~~--~~~~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 149 (220)
T 3hnr_A 73 IEPSREMRMIAKEKLP--KEFSITEGDFLSFEVP-TSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFA 149 (220)
T ss_dssp ECSCHHHHHHHHHHSC--TTCCEESCCSSSCCCC-SCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBS
T ss_pred EeCCHHHHHHHHHhCC--CceEEEeCChhhcCCC-CCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEecccc
Confidence 7999999999998876 5799999999999988 99999999999999999887 99999999999999999875444
Q ss_pred cHHHHHHHHHHHHHHhcCC--CCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 80 TLYELRSAVHLAEMERRGG--VASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
................+.. .......+++.+++.++|+++||+++....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~ 200 (220)
T 3hnr_A 150 DQDAYDKTVEAAKQRGFHQLANDLQTEYYTRIPVMQTIFENNGFHVTFTRL 200 (220)
T ss_dssp SHHHHHHHHHHHHHTTCHHHHHHHHHSCCCBHHHHHHHHHHTTEEEEEEEC
T ss_pred ChHHHHHHHHHHHhCCCccchhhcchhhcCCHHHHHHHHHHCCCEEEEeec
Confidence 4333222222111000000 001112356889999999999999866553
No 19
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.54 E-value=3.9e-14 Score=114.24 Aligned_cols=130 Identities=18% Similarity=0.206 Sum_probs=94.6
Q ss_pred CcChHHHHHhhCCCCCC-------CCceeEEEcCCCCCCCCCCccceeeecccccccCChh---HHHHHHHhhhcCCcEE
Q psy16312 2 CDNCESILSQAEPPEDT-------EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLP---GCFQQVLKCLRQDGVF 71 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-------~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~---~~l~~i~r~LkpGG~l 71 (245)
+|+|+.|++.|+++... ..++.+.++|+..+++++++||+|+++.++++++++. .++++++++|||||++
T Consensus 58 vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l 137 (235)
T 3sm3_A 58 IDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYL 137 (235)
T ss_dssp EESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEE
T ss_pred EECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEE
Confidence 79999999999886542 1268999999999998889999999999999999988 8999999999999999
Q ss_pred EEEecCCCcHH-HHHHHHHH-HHHHh-cCCC---------CCcccCCCCHHHHHHHHHhCCCeeeEEEEEeE
Q psy16312 72 LASIFGGETLY-ELRSAVHL-AEMER-RGGV---------ASHISPFTQIRDVGSLLTRAGFNMLTIDVDEI 131 (245)
Q Consensus 72 ~~~~~~~~~~~-~~~~~~~~-~~~~~-~~~~---------~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~~~ 131 (245)
++..+...... .....+.. ..... .+.. ......+.+.+++.++|+++||+++.+.....
T Consensus 138 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~~~~~~~~~~ 209 (235)
T 3sm3_A 138 YLVEFGQNWHLKLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCRFEIDYFRVKEL 209 (235)
T ss_dssp EEEEEBCCTTSHHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTTEEEEEEEEEEE
T ss_pred EEEECCcchhHHHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcCCEEEEEEecce
Confidence 98876543321 11111111 00000 0000 01112357899999999999999988775443
No 20
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.53 E-value=1.6e-17 Score=140.75 Aligned_cols=77 Identities=13% Similarity=0.145 Sum_probs=64.8
Q ss_pred CcChHHHHHhhCCCCCC---------CCceeEEEcCCCCCC----CC--CCccceeeeccccccc-CC---hhHHHHHHH
Q psy16312 2 CDNCESILSQAEPPEDT---------EVIYEKKFVDEEHLP----FA--ENSVDLLISNLALHWV-NN---LPGCFQQVL 62 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---------~~~i~f~~~D~~~l~----~~--~~~FD~Vis~~~l~~~-~d---~~~~l~~i~ 62 (245)
+|+|+.|++.|+++... ..++.|+++|++.++ ++ +++||+|+|++++||+ .+ +..++++++
T Consensus 63 vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~ 142 (313)
T 3bgv_A 63 TDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSCQFVCHYSFESYEQADMMLRNAC 142 (313)
T ss_dssp EESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEEETCGGGGGGSHHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCCCEEEEEEecchhhccCCHHHHHHHHHHHH
Confidence 79999999999876431 237999999999886 53 4599999999999998 44 569999999
Q ss_pred hhhcCCcEEEEEecCC
Q psy16312 63 KCLRQDGVFLASIFGG 78 (245)
Q Consensus 63 r~LkpGG~l~~~~~~~ 78 (245)
++|||||++++++++.
T Consensus 143 ~~LkpgG~li~~~~~~ 158 (313)
T 3bgv_A 143 ERLSPGGYFIGTTPNS 158 (313)
T ss_dssp TTEEEEEEEEEEEECH
T ss_pred HHhCCCcEEEEecCCh
Confidence 9999999999998654
No 21
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.53 E-value=5.2e-14 Score=117.52 Aligned_cols=170 Identities=14% Similarity=0.092 Sum_probs=113.9
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecC---
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFG--- 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~--- 77 (245)
+|+|+.|++.|++++.. ..+++|.++|+++++++ ++||+|+|+.++++++|+..++++++++|||||++++..+.
T Consensus 53 vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 131 (284)
T 3gu3_A 53 IDSGETLLAEARELFRLLPYDSEFLEGDATEIELN-DKYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPHWIS 131 (284)
T ss_dssp EESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCS-SCEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECCHHH
T ss_pred EECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcC-CCeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecchhc
Confidence 79999999999886542 24899999999999985 79999999999999999999999999999999999987644
Q ss_pred --------CCc------HHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEEEeEEEe----CCCH-
Q psy16312 78 --------GET------LYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDVDEIVIH----YPSM- 138 (245)
Q Consensus 78 --------~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~~~~~~----~~~~- 138 (245)
+.+ ...+...+.... . .....+.....+.++|+++||+.+.+........ ....
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~l~~~l~~aGF~~v~~~~~~~~~~~~~~~~~~d 204 (284)
T 3gu3_A 132 NMASYLLDGEKQSEFIQLGVLQKLFESDT-Q------RNGKDGNIGMKIPIYLSELGVKNIECRVSDKVNFLDSNMHHND 204 (284)
T ss_dssp HHHSEEETTSCHHHHCCHHHHHHHHHHHH-H------HTCCCTTGGGTHHHHHHHTTCEEEEEEECCCCEEECTTCCSHH
T ss_pred ccccceecCcchhhccchHHHHHHHHHHh-h------hhcccccHHHHHHHHHHHcCCCeEEEEEcCCccccCCCCChHH
Confidence 111 112222222111 1 1122344567899999999999887643332222 1121
Q ss_pred -HHHHHHHhcccccccccc--------CCCCCCHHHHHHHHHHHHHHhCC
Q psy16312 139 -FELMWDLKGMGESNACVN--------RSLHFPLELQYASAAIYEKYYGK 179 (245)
Q Consensus 139 -~~~~~~l~~~g~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~ 179 (245)
..+...++..|....... ...+++.+..+.+.+..++.+.+
T Consensus 205 ~~~l~~~l~~~G~~~~~~~~~~~~~~l~~~g~~~~e~~~~~~~~~~~~~~ 254 (284)
T 3gu3_A 205 KNDLYQSLKEEGIAGDPGDKQQFVERLIARGLTYDNALAQYEAELRFFKA 254 (284)
T ss_dssp HHHHHHHHHHTTTTCCCCCHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccccCCcccHHHHHHHHHHccccHHHHHHHHHHHHHHHHH
Confidence 224455666554331110 12256677777777777777654
No 22
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.53 E-value=8e-15 Score=120.99 Aligned_cols=121 Identities=19% Similarity=0.125 Sum_probs=91.1
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCCcH
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGETL 81 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~~~ 81 (245)
+|+|+.|++.|+++. +++|+++|++++++++++||+|+|+.+++|++|+..++++++++|| ||++++..+.+...
T Consensus 62 vD~s~~~~~~a~~~~----~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~~~~~ 136 (261)
T 3ege_A 62 VEPSIVMRQQAVVHP----QVEWFTGYAENLALPDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFDIRLA 136 (261)
T ss_dssp ECSCHHHHHSSCCCT----TEEEECCCTTSCCSCTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEECGGGC
T ss_pred EeCCHHHHHHHHhcc----CCEEEECchhhCCCCCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcCCchh
Confidence 799999999998875 7999999999999988999999999999999999999999999999 99888776654221
Q ss_pred HH--HHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEEEeEEEeC
Q psy16312 82 YE--LRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDVDEIVIHY 135 (245)
Q Consensus 82 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~~~~~~~ 135 (245)
.. ....+.... ......+.+...+. +|+++||+.+.+........+
T Consensus 137 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~-~l~~aGF~~v~~~~~~~p~~~ 184 (261)
T 3ege_A 137 QRIWLYDYFPFLW-------EDALRFLPLDEQIN-LLQENTKRRVEAIPFLLPHDL 184 (261)
T ss_dssp CCCGGGGTCHHHH-------HHHHTSCCHHHHHH-HHHHHHCSEEEEEECCEETTC
T ss_pred HHHHHHHHHHHHh-------hhhhhhCCCHHHHH-HHHHcCCCceeEEEecCCCcC
Confidence 10 000000000 01112456678888 999999998877765555443
No 23
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.52 E-value=9.8e-15 Score=115.62 Aligned_cols=111 Identities=14% Similarity=0.138 Sum_probs=90.7
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccC--ChhHHHHHHHhhhcCCcEEEEEecCCC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVN--NLPGCFQQVLKCLRQDGVFLASIFGGE 79 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~--d~~~~l~~i~r~LkpGG~l~~~~~~~~ 79 (245)
+|+|+.|++.|+++.+ ++.|+++|+.++++++++||+|+|+.+++|++ ++..++++++++|||||+++++++...
T Consensus 69 vD~s~~~~~~a~~~~~---~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~ 145 (203)
T 3h2b_A 69 LEPATRLVELARQTHP---SVTFHHGTITDLSDSPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSGP 145 (203)
T ss_dssp ECCCHHHHHHHHHHCT---TSEEECCCGGGGGGSCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECCS
T ss_pred EeCCHHHHHHHHHhCC---CCeEEeCcccccccCCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccCC
Confidence 7999999999998754 79999999999998889999999999999997 899999999999999999999886554
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 80 TLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
... .+.. ......+.+..++.++|+++||+++.+..
T Consensus 146 ~~~------------~~~~-~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 181 (203)
T 3h2b_A 146 SLE------------PMYH-PVATAYRWPLPELAQALETAGFQVTSSHW 181 (203)
T ss_dssp SCE------------EECC-SSSCEEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred chh------------hhhc-hhhhhccCCHHHHHHHHHHCCCcEEEEEe
Confidence 310 0111 11122356889999999999999876664
No 24
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.51 E-value=1.5e-14 Score=119.58 Aligned_cols=124 Identities=11% Similarity=0.128 Sum_probs=84.7
Q ss_pred CcChHHHHHhhCCCCC---CCCceeEEEcCCCCCCCCCCccceeeecccccccCCh--hHHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPED---TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNL--PGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~---~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~--~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+|+.||+.|++++. ...+++|+++|+.++|++ .||+|+|+++|||+++. ..+|++++++|||||+|+++..
T Consensus 102 vD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~--~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 102 IDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE--NASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp EESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC--SEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHhhccCceEEEeeccccccccc--ccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence 7999999999998643 235799999999999875 69999999999999754 4789999999999999988754
Q ss_pred CCCcHHHHH----HHHHHHHHH-hcCCCC--------CcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 77 GGETLYELR----SAVHLAEME-RRGGVA--------SHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 77 ~~~~~~~~~----~~~~~~~~~-~~~~~~--------~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
....-.... ..+...... .+.... .......+.+++.++|+++||+.+.+.
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~g~s~~ei~~~~~~l~~~~~~~s~~~~~~~L~~AGF~~ve~~ 243 (261)
T 4gek_A 180 FSFEDAKVGELLFNMHHDFKRANGYSELEISQKRSMLENVMLTDSVETHKARLHKAGFEHSELW 243 (261)
T ss_dssp BCCSSHHHHHHHHHHHHHHHHHTTGGGSTTHHHHHHHHHHCCCBCHHHHHHHHHHHTCSEEEEE
T ss_pred cCCCCHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhcccccCCCHHHHHHHHHHcCCCeEEEE
Confidence 322111111 111111000 000000 011223578899999999999976543
No 25
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.51 E-value=3.8e-14 Score=115.30 Aligned_cols=110 Identities=11% Similarity=0.113 Sum_probs=89.0
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCC--CCCCCccceeeecccccccCCh--hHHHHHHHhhhcCCcEEEEEecC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHL--PFAENSVDLLISNLALHWVNNL--PGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l--~~~~~~FD~Vis~~~l~~~~d~--~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+|+|+.|++.|+++ +.++++|+.++ ++++++||+|+|+.+++|++++ ..++++++++|||||++++++++
T Consensus 69 vD~s~~~~~~a~~~------~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 69 VDINEDMIKFCEGK------FNVVKSDAIEYLKSLPDKYLDGVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp ECSCHHHHHHHHTT------SEEECSCHHHHHHTSCTTCBSEEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred EECCHHHHHHHHhh------cceeeccHHHHhhhcCCCCeeEEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 79999999999876 67899999875 7888999999999999999955 89999999999999999999887
Q ss_pred CCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 78 GETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
..........+ ..+....+.+..++.++++++||+++.+.
T Consensus 143 ~~~~~~~~~~~----------~~~~~~~~~~~~~l~~~l~~aGf~~~~~~ 182 (240)
T 3dli_A 143 PTSLYSLINFY----------IDPTHKKPVHPETLKFILEYLGFRDVKIE 182 (240)
T ss_dssp TTSHHHHHHHT----------TSTTCCSCCCHHHHHHHHHHHTCEEEEEE
T ss_pred cchhHHHHHHh----------cCccccccCCHHHHHHHHHHCCCeEEEEE
Confidence 76654433211 12223345678999999999999976554
No 26
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.51 E-value=1.2e-14 Score=126.68 Aligned_cols=141 Identities=19% Similarity=0.170 Sum_probs=98.5
Q ss_pred CcChHHHHHhhCCCCC----------CCCceeEEEcCCCCC------CCCCCccceeeecccccccCChhHHHHHHHhhh
Q psy16312 2 CDNCESILSQAEPPED----------TEVIYEKKFVDEEHL------PFAENSVDLLISNLALHWVNNLPGCFQQVLKCL 65 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~----------~~~~i~f~~~D~~~l------~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~L 65 (245)
+|+|+.|++.|++++. ..++++|+++|++++ ++++++||+|+|+.+++|++|+..+|++++++|
T Consensus 114 vD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~L 193 (383)
T 4fsd_A 114 VDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEGVPDSSVDIVISNCVCNLSTNKLALFKEIHRVL 193 (383)
T ss_dssp EECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHE
T ss_pred EECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCCCCCCCEEEEEEccchhcCCCHHHHHHHHHHHc
Confidence 7999999999998742 125899999999987 888899999999999999999999999999999
Q ss_pred cCCcEEEEEecCCCc-HHH-HHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEE-EeEEEeCCCHHHHH
Q psy16312 66 RQDGVFLASIFGGET-LYE-LRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDV-DEIVIHYPSMFELM 142 (245)
Q Consensus 66 kpGG~l~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~-~~~~~~~~~~~~~~ 142 (245)
||||+++++.+.... ... ...... .+ ........+.+++.++|+++||+.+.+.. ..+...++.+..++
T Consensus 194 kpgG~l~i~~~~~~~~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~ll~~aGF~~v~~~~~~~~~~~~~~~~~~l 265 (383)
T 4fsd_A 194 RDGGELYFSDVYADRRLSEAAQQDPI-----LY---GECLGGALYLEDFRRLVAEAGFRDVRLVSVGPVDVSDPQLRKLV 265 (383)
T ss_dssp EEEEEEEEEEEEESSCCCHHHHHCHH-----HH---HTTCTTCCBHHHHHHHHHHTTCCCEEEEEEEEECCCCHHHHTTS
T ss_pred CCCCEEEEEEeccccccCHhHhhhHH-----Hh---hcccccCCCHHHHHHHHHHCCCceEEEEeccccccCCHhHHHHh
Confidence 999999987543321 111 111100 00 11122455789999999999999775543 22333333334444
Q ss_pred HHHhcccc
Q psy16312 143 WDLKGMGE 150 (245)
Q Consensus 143 ~~l~~~g~ 150 (245)
+.+..++.
T Consensus 266 ~~~~~~~~ 273 (383)
T 4fsd_A 266 PDVQFYSC 273 (383)
T ss_dssp TTCCEEEE
T ss_pred cCCceeEE
Confidence 44444443
No 27
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.50 E-value=1.5e-13 Score=110.23 Aligned_cols=117 Identities=15% Similarity=0.249 Sum_probs=90.8
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCCcH
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGETL 81 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~~~ 81 (245)
+|+|+.|++.|+++ ++.+.++|++.+++++++||+|++..+++|++++..++++++++|+|||+++++++.....
T Consensus 71 vD~s~~~~~~a~~~-----~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~ 145 (219)
T 1vlm_A 71 VEPSERMAEIARKR-----GVFVLKGTAENLPLKDESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVDRESF 145 (219)
T ss_dssp EESCHHHHHHHHHT-----TCEEEECBTTBCCSCTTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEECSSSH
T ss_pred cCCCHHHHHHHHhc-----CCEEEEcccccCCCCCCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeCCccH
Confidence 79999999999876 5889999999999888899999999999999999999999999999999999987665443
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 82 YELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
.. ..+... ..+........+.+..++.++|+++||+++.+..
T Consensus 146 ~~--~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~~Gf~~~~~~~ 187 (219)
T 1vlm_A 146 LG--REYEKN---KEKSVFYKNARFFSTEELMDLMRKAGFEEFKVVQ 187 (219)
T ss_dssp HH--HHHHHT---TTC-CCSTTCCCCCHHHHHHHHHHTTCEEEEEEE
T ss_pred HH--HHHHHH---hcCcchhcccccCCHHHHHHHHHHCCCeEEEEec
Confidence 21 111110 0111111223457899999999999999866553
No 28
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.50 E-value=1.5e-14 Score=115.43 Aligned_cols=125 Identities=14% Similarity=0.180 Sum_probs=90.7
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCC
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGG 78 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~ 78 (245)
+|+|+.|++.|++++.. ..+++++++|++++++++++||+|+|+.+++|++++..++++++++|||||++++.....
T Consensus 72 ~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 151 (219)
T 3dlc_A 72 LDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFG 151 (219)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCS
T ss_pred EECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccC
Confidence 79999999999886431 247999999999999988999999999999999999999999999999999999876433
Q ss_pred CcHHHHHHHHHHHHHHhcCCCCC---cccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 79 ETLYELRSAVHLAEMERRGGVAS---HISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
.. .....+..........+.. ....+.+.+++.++|+++||+++.+..
T Consensus 152 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~v~~~~ 202 (219)
T 3dlc_A 152 NK--ELRDSISAEMIRKNPDWKEFNRKNISQENVERFQNVLDEIGISSYEIIL 202 (219)
T ss_dssp SH--HHHHHHHHHHHHHCTTHHHHHHHHSSHHHHHHHHHHHHHHTCSSEEEEE
T ss_pred cH--HHHHHHHHHHHHhHHHHHhhhhhccccCCHHHHHHHHHHcCCCeEEEEe
Confidence 22 1111111100011000000 112234678999999999999876653
No 29
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.50 E-value=5.7e-14 Score=112.44 Aligned_cols=110 Identities=15% Similarity=0.150 Sum_probs=90.7
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCC
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGE 79 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~ 79 (245)
+|+|+.|++.|++++. ...++++.++|+.++++++++||+|+++.+++|++++..++++++++|||||++++..+...
T Consensus 68 vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 147 (219)
T 3dh0_A 68 IDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKE 147 (219)
T ss_dssp EESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSS
T ss_pred EECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEeccc
Confidence 7999999999988753 22479999999999998889999999999999999999999999999999999999875543
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 80 TLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
.. ........+.+.+++.++++++||+++...
T Consensus 148 ~~----------------~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~ 179 (219)
T 3dh0_A 148 ER----------------DKGPPPEEVYSEWEVGLILEDAGIRVGRVV 179 (219)
T ss_dssp CC----------------SSSCCGGGSCCHHHHHHHHHHTTCEEEEEE
T ss_pred cc----------------ccCCchhcccCHHHHHHHHHHCCCEEEEEE
Confidence 21 011223345688999999999999986654
No 30
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.47 E-value=5.5e-14 Score=112.16 Aligned_cols=123 Identities=13% Similarity=0.032 Sum_probs=87.3
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCCh--hHHHHHHHhhhcCCcEEEEEecCCC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNL--PGCFQQVLKCLRQDGVFLASIFGGE 79 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~--~~~l~~i~r~LkpGG~l~~~~~~~~ 79 (245)
+|+|+.|++.|++.. ..+++++++|+.++ +.+++||+|+|+.+++|++++ ..++++++++|||||++++..+...
T Consensus 74 ~D~s~~~~~~a~~~~--~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 150 (218)
T 3ou2_A 74 LDGSAEMIAEAGRHG--LDNVEFRQQDLFDW-TPDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTDH 150 (218)
T ss_dssp EESCHHHHHHHGGGC--CTTEEEEECCTTSC-CCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCC
T ss_pred EeCCHHHHHHHHhcC--CCCeEEEecccccC-CCCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCCC
Confidence 799999999999832 25799999999988 667999999999999999886 7999999999999999999876653
Q ss_pred cHHHHHHHHHHHHHHhcCC---CCC---cccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 80 TLYELRSAVHLAEMERRGG---VAS---HISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~---~~~---~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
. ..+...+.......... ... ....+.+.+++.++|+++||++.....
T Consensus 151 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~v~~~~~ 204 (218)
T 3ou2_A 151 E-RRLEQQDDSEPEVAVRRTLQDGRSFRIVKVFRSPAELTERLTALGWSCSVDEV 204 (218)
T ss_dssp C-------------CEEEEECTTSCEEEEECCCCCHHHHHHHHHHTTEEEEEEEE
T ss_pred c-cccchhhhcccccceeeecCCcchhhHhhcCCCHHHHHHHHHHCCCEEEeeec
Confidence 2 11111111100011000 000 113367899999999999999655443
No 31
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.47 E-value=7.1e-14 Score=115.50 Aligned_cols=115 Identities=15% Similarity=0.136 Sum_probs=90.6
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecC-
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFG- 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~- 77 (245)
+|+|+.|++.|+++... .++++|+++|++++++++++||+|+|+.+++++ ++..++++++++|||||++++..+.
T Consensus 75 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~ 153 (267)
T 3kkz_A 75 LDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAIYNI-GFERGLNEWRKYLKKGGYLAVSECSW 153 (267)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCGGGT-CHHHHHHHHGGGEEEEEEEEEEEEEE
T ss_pred EeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCceec-CHHHHHHHHHHHcCCCCEEEEEEeee
Confidence 79999999999886431 246999999999999888999999999999999 9999999999999999999887532
Q ss_pred --CCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 78 --GETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 78 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
..........+.. . ...+.+...+.++|+++||+++.+..
T Consensus 154 ~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~~l~~aGf~~v~~~~ 195 (267)
T 3kkz_A 154 FTDERPAEINDFWMD----A-------YPEIDTIPNQVAKIHKAGYLPVATFI 195 (267)
T ss_dssp SSSCCCHHHHHHHHH----H-------CTTCEEHHHHHHHHHHTTEEEEEEEE
T ss_pred cCCCChHHHHHHHHH----h-------CCCCCCHHHHHHHHHHCCCEEEEEEE
Confidence 2222333333321 1 12456789999999999999876643
No 32
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.47 E-value=1.1e-13 Score=113.40 Aligned_cols=75 Identities=20% Similarity=0.327 Sum_probs=69.3
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+|+|+.|++.|+++.. ..++.++++|++.+++++++||+|+|+.+++|++++..++++++++|||||++++++..
T Consensus 73 vD~s~~~~~~a~~~~~-~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 147 (253)
T 3g5l_A 73 IDLSERMLTEAKRKTT-SPVVCYEQKAIEDIAIEPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEH 147 (253)
T ss_dssp EESCHHHHHHHHHHCC-CTTEEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EECCHHHHHHHHHhhc-cCCeEEEEcchhhCCCCCCCeEEEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 7999999999998765 36899999999999988899999999999999999999999999999999999998743
No 33
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.46 E-value=1.7e-14 Score=118.19 Aligned_cols=115 Identities=15% Similarity=0.127 Sum_probs=88.5
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecC-
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFG- 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~- 77 (245)
+|+|+.|++.|++++.. ..+++|+++|++++++ +++||+|+|..+++|++++..+|++++++|||||++++....
T Consensus 65 vD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (256)
T 1nkv_A 65 IDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYW 143 (256)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEE
T ss_pred EeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcc
Confidence 79999999999876431 2479999999999988 789999999999999999999999999999999999887532
Q ss_pred -CCc-HHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 78 -GET-LYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 78 -~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
... ....... +. ......+.+..++.++|+++||+++.+.
T Consensus 144 ~~~~~~~~~~~~--------~~--~~~~~~~~~~~~~~~~l~~aGf~~~~~~ 185 (256)
T 1nkv_A 144 RQLPATEEIAQA--------CG--VSSTSDFLTLPGLVGAFDDLGYDVVEMV 185 (256)
T ss_dssp TTCCSSHHHHHT--------TT--CSCGGGSCCHHHHHHHHHTTTBCCCEEE
T ss_pred cCCCChHHHHHH--------Hh--cccccccCCHHHHHHHHHHCCCeeEEEE
Confidence 111 1111111 11 1222356789999999999999986544
No 34
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.45 E-value=1.5e-13 Score=112.60 Aligned_cols=114 Identities=17% Similarity=0.118 Sum_probs=89.6
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecC-
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFG- 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~- 77 (245)
+|+|+.|++.|++++.. ..+++++++|++++|+++++||+|+|+.+++|+ ++..++++++++|||||+++++.+.
T Consensus 75 vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~-~~~~~l~~~~~~L~pgG~l~~~~~~~ 153 (257)
T 3f4k_A 75 IDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAIYNI-GFERGMNEWSKYLKKGGFIAVSEASW 153 (257)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCSCCC-CHHHHHHHHHTTEEEEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChHhhc-CHHHHHHHHHHHcCCCcEEEEEEeec
Confidence 79999999999886431 235999999999999988999999999999999 8999999999999999999887632
Q ss_pred --CCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 78 --GETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 78 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
..........+... ...+.+..++.++|+++||+++...
T Consensus 154 ~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~l~~aGf~~v~~~ 194 (257)
T 3f4k_A 154 FTSERPAEIEDFWMDA-----------YPEISVIPTCIDKMERAGYTPTAHF 194 (257)
T ss_dssp SSSCCCHHHHHHHHHH-----------CTTCCBHHHHHHHHHHTTEEEEEEE
T ss_pred cCCCChHHHHHHHHHh-----------CCCCCCHHHHHHHHHHCCCeEEEEE
Confidence 22223333333211 1225688999999999999987654
No 35
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.45 E-value=2.7e-13 Score=108.86 Aligned_cols=133 Identities=19% Similarity=0.207 Sum_probs=96.0
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCC--CCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEH--LPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGE 79 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~--l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~ 79 (245)
+|+|+.|++.|+++.. .+.++|+.+ +++++++||+|++..+++|++++..++++++++|+|||+++++++...
T Consensus 60 ~D~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~ 134 (230)
T 3cc8_A 60 IEAFPEAAEQAKEKLD-----HVVLGDIETMDMPYEEEQFDCVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIPNVS 134 (230)
T ss_dssp EESSHHHHHHHHTTSS-----EEEESCTTTCCCCSCTTCEEEEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEECTT
T ss_pred EeCCHHHHHHHHHhCC-----cEEEcchhhcCCCCCCCccCEEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeCCcc
Confidence 7999999999987753 688999987 667778999999999999999999999999999999999999986655
Q ss_pred cHHHHHHHHHHHHHHhcCC-----CCCcccCCCCHHHHHHHHHhCCCeeeEEEEEeEEEeCCCHHHHHHHH
Q psy16312 80 TLYELRSAVHLAEMERRGG-----VASHISPFTQIRDVGSLLTRAGFNMLTIDVDEIVIHYPSMFELMWDL 145 (245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~~~~~~~~~~~~~~~~l 145 (245)
........+ ...+.. ..+....+.+..++.++|+++||+++.+.... ..++....+.+.+
T Consensus 135 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~~~--~~~~~~~~~~~~l 199 (230)
T 3cc8_A 135 HISVLAPLL----AGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAGYSISKVDRVY--VDHKMYEPLIEEL 199 (230)
T ss_dssp SHHHHHHHH----TTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTTEEEEEEEEEE--CCCGGGHHHHHHH
T ss_pred hHHHHHHHh----cCCceeccCCCCCcceEEEecHHHHHHHHHHcCCeEEEEEecc--cChhhccchHHHH
Confidence 543332221 011111 01112245789999999999999987666433 3333334444433
No 36
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.43 E-value=5.6e-14 Score=118.88 Aligned_cols=116 Identities=12% Similarity=0.089 Sum_probs=89.4
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCC
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGG 78 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~ 78 (245)
+|+|+.|++.|++++.. ..+++|+++|++++++++++||+|+|+.+++|+ ++..++++++++|||||++++.++..
T Consensus 146 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~-~~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 146 VTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNESTMYV-DLHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEESCGGGS-CHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECCchhhC-CHHHHHHHHHHHcCCCcEEEEEEccc
Confidence 79999999999886431 247999999999999888999999999999999 69999999999999999998876533
Q ss_pred CcHH----HHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 79 ETLY----ELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 79 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
.... .....+.. . ....+.+.+++.++|+++||+++.+..
T Consensus 225 ~~~~~~~~~~~~~~~~----~------~~~~~~s~~~~~~~l~~aGf~~~~~~~ 268 (312)
T 3vc1_A 225 NPRYGQPSKWVSQINA----H------FECNIHSRREYLRAMADNRLVPHTIVD 268 (312)
T ss_dssp CTTTCSCCHHHHHHHH----H------HTCCCCBHHHHHHHHHTTTEEEEEEEE
T ss_pred cccccchhHHHHHHHh----h------hcCCCCCHHHHHHHHHHCCCEEEEEEe
Confidence 2211 11111110 0 112467899999999999999866553
No 37
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.43 E-value=6.2e-13 Score=105.81 Aligned_cols=110 Identities=16% Similarity=0.221 Sum_probs=86.2
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCCcH
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGETL 81 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~~~ 81 (245)
+|+|+.|++.|+++. .++.++++|++++++++++||+|++..+++|++++..++++++++|||||+++++++...+.
T Consensus 62 vD~s~~~~~~a~~~~---~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~ 138 (211)
T 2gs9_A 62 VEPSEAMLAVGRRRA---PEATWVRAWGEALPFPGESFDVVLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEALSP 138 (211)
T ss_dssp ECCCHHHHHHHHHHC---TTSEEECCCTTSCCSCSSCEEEEEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECTTSH
T ss_pred EeCCHHHHHHHHHhC---CCcEEEEcccccCCCCCCcEEEEEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCCcCc
Confidence 799999999999876 47899999999999988899999999999999999999999999999999999998766543
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCC
Q psy16312 82 YELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAG 120 (245)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG 120 (245)
.... +... ...+........+++.+++.++|+ |
T Consensus 139 ~~~~--~~~~--~~~~~~~~~~~~~~s~~~l~~~l~--G 171 (211)
T 2gs9_A 139 WAAL--YRRL--GEKGVLPWAQARFLAREDLKALLG--P 171 (211)
T ss_dssp HHHH--HHHH--HHTTCTTGGGCCCCCHHHHHHHHC--S
T ss_pred HHHH--HHHH--hhccCccccccccCCHHHHHHHhc--C
Confidence 2211 1111 111111112345679999999997 7
No 38
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.41 E-value=1.1e-13 Score=113.22 Aligned_cols=114 Identities=11% Similarity=0.091 Sum_probs=88.4
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccC--ChhHHHHHHHhhhcCCcEEEEEecCCC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVN--NLPGCFQQVLKCLRQDGVFLASIFGGE 79 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~--d~~~~l~~i~r~LkpGG~l~~~~~~~~ 79 (245)
+|+|+.|++.|+++.....++.+.++|++.+++++++||+|+|..+++|++ ++..++++++++|||||++++..+...
T Consensus 122 vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 201 (254)
T 1xtp_A 122 LEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENCST 201 (254)
T ss_dssp EESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC-
T ss_pred EeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCeEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecCCC
Confidence 799999999999877644679999999999998888999999999999995 588999999999999999998864211
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 80 TLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
... + ... ......+.+.+++.++|+++||+++.+..
T Consensus 202 ~~~-----~-------~~~-~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 237 (254)
T 1xtp_A 202 GDR-----F-------LVD-KEDSSLTRSDIHYKRLFNESGVRVVKEAF 237 (254)
T ss_dssp -CC-----E-------EEE-TTTTEEEBCHHHHHHHHHHHTCCEEEEEE
T ss_pred ccc-----c-------eec-ccCCcccCCHHHHHHHHHHCCCEEEEeee
Confidence 000 0 000 01111245789999999999999876553
No 39
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.40 E-value=4.1e-13 Score=113.18 Aligned_cols=123 Identities=15% Similarity=0.106 Sum_probs=90.4
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeecccccccCChhH---HHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPG---CFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~---~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|++++.. ..+++|+++|+.+++++ ++||+|+|+.+++|++++.. ++++++++|||||+++++.
T Consensus 149 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 227 (305)
T 3ocj_A 149 IDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR-EGYDLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSF 227 (305)
T ss_dssp EESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC-SCEEEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc-CCeEEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEe
Confidence 79999999999986542 23599999999999987 99999999999999999886 6999999999999999987
Q ss_pred cCCCcHHH------------HHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 76 FGGETLYE------------LRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 76 ~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
+...+... ........... .....+...+.+.+++.++|+++||+++.+.
T Consensus 228 ~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~aGF~~v~~~ 289 (305)
T 3ocj_A 228 LTPPPALSPDSPWDMQAIDPHDLQLQQLVFT--RLIQPRWNALRTHAQTRAQLEEAGFTDLRFE 289 (305)
T ss_dssp CCCCTTTCTTCCCCGGGSCHHHHHHHHHHHH--HTTCCSCCCCCCHHHHHHHHHHTTCEEEEEE
T ss_pred cCCCCcccccccceeeccccchhhhhhhHHH--HHHhhhhhccCCHHHHHHHHHHCCCEEEEEE
Confidence 54321100 00000000000 0112233456789999999999999987665
No 40
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.40 E-value=7.6e-13 Score=107.33 Aligned_cols=75 Identities=28% Similarity=0.365 Sum_probs=68.7
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+|+|+.|++.|+++... .++.++++|+..+++++++||+|++..+++|++++..++++++++|||||+++++++.
T Consensus 72 vD~s~~~~~~a~~~~~~-~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 146 (243)
T 3bkw_A 72 LDLSEKMLARARAAGPD-TGITYERADLDKLHLPQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFSTEH 146 (243)
T ss_dssp EESCHHHHHHHHHTSCS-SSEEEEECCGGGCCCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EcCCHHHHHHHHHhccc-CCceEEEcChhhccCCCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEeCC
Confidence 79999999999988764 4799999999999988889999999999999999999999999999999999998743
No 41
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.38 E-value=4.7e-13 Score=106.56 Aligned_cols=110 Identities=16% Similarity=0.197 Sum_probs=88.1
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccC--ChhHHHHHHHhhhcCCcEEEEEecCCC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVN--NLPGCFQQVLKCLRQDGVFLASIFGGE 79 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~--d~~~~l~~i~r~LkpGG~l~~~~~~~~ 79 (245)
+|+|+.|++.|+++. ++.+.++|+..++ .+++||+|+|+.+++|++ ++..++++++++|||||+++++++...
T Consensus 71 vD~s~~~~~~a~~~~----~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 145 (211)
T 3e23_A 71 TDGSPELAAEASRRL----GRPVRTMLFHQLD-AIDAYDAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKSGE 145 (211)
T ss_dssp EESCHHHHHHHHHHH----TSCCEECCGGGCC-CCSCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECCS
T ss_pred ECCCHHHHHHHHHhc----CCceEEeeeccCC-CCCcEEEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcCCC
Confidence 799999999998775 4788999999998 679999999999999998 788999999999999999998865432
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCC-CeeeEEEEEe
Q psy16312 80 TLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAG-FNMLTIDVDE 130 (245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-F~~~~~~~~~ 130 (245)
.. ..........+.+.+++.++|+++| |+++.+....
T Consensus 146 ~~--------------~~~~~~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~ 183 (211)
T 3e23_A 146 GE--------------GRDKLARYYNYPSEEWLRARYAEAGTWASVAVESSE 183 (211)
T ss_dssp SC--------------EECTTSCEECCCCHHHHHHHHHHHCCCSEEEEEEEE
T ss_pred cc--------------cccccchhccCCCHHHHHHHHHhCCCcEEEEEEecc
Confidence 20 0001122334678999999999999 9998766543
No 42
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.37 E-value=3.8e-12 Score=102.61 Aligned_cols=142 Identities=15% Similarity=0.154 Sum_probs=105.5
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCC-CCCCCC-CCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDE-EHLPFA-ENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGE 79 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~-~~l~~~-~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~ 79 (245)
+|+|+.|++.|+++. ++++|+++|+ +.+|++ +++||+|+|+ .++..++++++++|||||+++..
T Consensus 76 vD~s~~~~~~a~~~~---~~~~~~~~d~~~~~~~~~~~~fD~v~~~------~~~~~~l~~~~~~LkpgG~l~~~----- 141 (226)
T 3m33_A 76 YDFSPELLKLARANA---PHADVYEWNGKGELPAGLGAPFGLIVSR------RGPTSVILRLPELAAPDAHFLYV----- 141 (226)
T ss_dssp EESCHHHHHHHHHHC---TTSEEEECCSCSSCCTTCCCCEEEEEEE------SCCSGGGGGHHHHEEEEEEEEEE-----
T ss_pred EECCHHHHHHHHHhC---CCceEEEcchhhccCCcCCCCEEEEEeC------CCHHHHHHHHHHHcCCCcEEEEe-----
Confidence 799999999999884 4799999999 678887 8999999997 48889999999999999999811
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEEEeEEEeCCCHHHHHHHHhccccccccccCCC
Q psy16312 80 TLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDVDEIVIHYPSMFELMWDLKGMGESNACVNRSL 159 (245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~ 159 (245)
..+.+...+.+.+.++||..+.+........+++..+........|.
T Consensus 142 ------------------------~~~~~~~~~~~~l~~~Gf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 188 (226)
T 3m33_A 142 ------------------------GPRLNVPEVPERLAAVGWDIVAEDHVSVLAHAPTWEDWQMRGEFMGK--------- 188 (226)
T ss_dssp ------------------------ESSSCCTHHHHHHHHTTCEEEEEEEEEEEEEECSHHHHHHHHHHHTS---------
T ss_pred ------------------------CCcCCHHHHHHHHHHCCCeEEEEEeeeecccCcCHHHHhhhHHhhhh---------
Confidence 11224567888999999999999888888889887665443332321
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCCCCCceeceeEEEEEEEeeCCC
Q psy16312 160 HFPLELQYASAAIYEKYYGKPNDDKNGGGTCVPATFQIIYLVAWKPD 206 (245)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~g~~~~~~~~~~~~~a~Kp~ 206 (245)
..... .+..... .+ | .+..-...+++|++|.
T Consensus 189 ~~~~~-------~w~~~~~---~~----g--~~~~~~~~~~la~~~~ 219 (226)
T 3m33_A 189 LARRA-------DWDAEAT---VR----G--MPYREERHLVLARQLG 219 (226)
T ss_dssp CCCHH-------HHHHHCB---TT----B--EEEEEEEEEEEEECC-
T ss_pred hhccc-------ccccccC---CC----C--ceEeeeeEEEEEeccc
Confidence 11122 2333332 23 5 6666677799999985
No 43
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.37 E-value=3.5e-13 Score=109.60 Aligned_cols=113 Identities=13% Similarity=0.132 Sum_probs=87.5
Q ss_pred CcChHHHHHhhCCCCCC--CCceeEEEcCCCCCCCCCCccceeeecccccccCChh--HHHHHHHhhhcCCcEEEEEecC
Q psy16312 2 CDNCESILSQAEPPEDT--EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLP--GCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~--~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~--~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+|+|+.|++.|++++.. ..++.++++|+..+++.+++||+|++..+++|++++. .++++++++|||||++++..+.
T Consensus 108 vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 187 (241)
T 2ex4_A 108 VDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNM 187 (241)
T ss_dssp EESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEcc
Confidence 79999999999987653 2468999999999998878999999999999998855 8999999999999999987643
Q ss_pred CCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 78 GETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
... .. .+.. .......+..++.++|+++||+++....
T Consensus 188 ~~~----~~--------~~~~--~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 224 (241)
T 2ex4_A 188 AQE----GV--------ILDD--VDSSVCRDLDVVRRIICSAGLSLLAEER 224 (241)
T ss_dssp BSS----SE--------EEET--TTTEEEEBHHHHHHHHHHTTCCEEEEEE
T ss_pred CCC----cc--------eecc--cCCcccCCHHHHHHHHHHcCCeEEEeee
Confidence 322 00 0000 0011134789999999999999876653
No 44
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.36 E-value=2.8e-13 Score=107.68 Aligned_cols=109 Identities=7% Similarity=-0.081 Sum_probs=80.2
Q ss_pred CcChHHHHHhhCCCCCC--------------CCceeEEEcCCCCCCCCC-CccceeeecccccccCC--hhHHHHHHHhh
Q psy16312 2 CDNCESILSQAEPPEDT--------------EVIYEKKFVDEEHLPFAE-NSVDLLISNLALHWVNN--LPGCFQQVLKC 64 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~--------------~~~i~f~~~D~~~l~~~~-~~FD~Vis~~~l~~~~d--~~~~l~~i~r~ 64 (245)
+|+|+.||+.|+++... ..+++|+++|+.++++.+ ++||+|++..+++++++ ...++++++++
T Consensus 50 vD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~ 129 (203)
T 1pjz_A 50 AELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTARDIGHCAAFYDRAAMIALPADMRERYVQHLEAL 129 (203)
T ss_dssp EEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHHHHHSEEEEEEESCGGGSCHHHHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcccCCCEEEEEECcchhhCCHHHHHHHHHHHHHH
Confidence 79999999999876431 257999999999999765 79999999999999964 44689999999
Q ss_pred hcCCcEEEEEecCCCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 65 LRQDGVFLASIFGGETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 65 LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
|||||++++.+...... ... .+ ....+.+++.+++.+ ||+++.+..
T Consensus 130 LkpgG~~~l~~~~~~~~-------------~~~--~~--~~~~~~~el~~~~~~-gf~i~~~~~ 175 (203)
T 1pjz_A 130 MPQACSGLLITLEYDQA-------------LLE--GP--PFSVPQTWLHRVMSG-NWEVTKVGG 175 (203)
T ss_dssp SCSEEEEEEEEESSCSS-------------SSS--SC--CCCCCHHHHHHTSCS-SEEEEEEEE
T ss_pred cCCCcEEEEEEEecCcc-------------ccC--CC--CCCCCHHHHHHHhcC-CcEEEEecc
Confidence 99999854443221100 000 11 112478899999987 998765554
No 45
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.34 E-value=2.2e-12 Score=108.43 Aligned_cols=118 Identities=14% Similarity=0.105 Sum_probs=87.0
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeecccccccCCh---------hHHHHHHHhhhcCCc
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNL---------PGCFQQVLKCLRQDG 69 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~---------~~~l~~i~r~LkpGG 69 (245)
+|+|+.|++.|+++... ..+++++++|+.++ +++||+|+|+.+++|++|+ ..++++++++|||||
T Consensus 101 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG 177 (302)
T 3hem_A 101 LTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDG 177 (302)
T ss_dssp EECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTC
T ss_pred EECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCc
Confidence 79999999999886532 23799999999877 5899999999999999877 699999999999999
Q ss_pred EEEEEecCCCcHHHHHHH-----------HHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 70 VFLASIFGGETLYELRSA-----------VHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 70 ~l~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
++++..+........... ..+. ..+ ......+++.+++.++++++||+++.+.
T Consensus 178 ~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~p~~~~~s~~~~~~~l~~aGf~~~~~~ 241 (302)
T 3hem_A 178 RMLLHTITIPDKEEAQELGLTSPMSLLRFIKFI--LTE---IFPGGRLPRISQVDYYSSNAGWKVERYH 241 (302)
T ss_dssp EEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHH--HHH---TCTTCCCCCHHHHHHHHHHHTCEEEEEE
T ss_pred EEEEEEEeccCccchhhccccccccccchHHHH--HHh---cCCCCCCCCHHHHHHHHHhCCcEEEEEE
Confidence 999887654432221110 0000 000 0111235678999999999999987665
No 46
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.34 E-value=2.1e-12 Score=104.54 Aligned_cols=108 Identities=14% Similarity=0.163 Sum_probs=86.7
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeecccccccC--ChhHHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVN--NLPGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~--d~~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+|+.|++.|+++... ..+++|+++|+.+++.. ++||+|+|+.+++|++ ++..++++++++|||||++++..+
T Consensus 94 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 172 (235)
T 3lcc_A 94 LDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPT-ELFDLIFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMY 172 (235)
T ss_dssp ECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCS-SCEEEEEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCC-CCeeEEEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEe
Confidence 79999999999987653 24699999999998754 6999999999999998 888999999999999999998765
Q ss_pred CCCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 77 GGETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
..... ........+.+++.++|+++||+++.+..
T Consensus 173 ~~~~~------------------~~~~~~~~~~~~~~~~l~~~Gf~~~~~~~ 206 (235)
T 3lcc_A 173 PITDH------------------VGGPPYKVDVSTFEEVLVPIGFKAVSVEE 206 (235)
T ss_dssp CCSCC------------------CSCSSCCCCHHHHHHHHGGGTEEEEEEEE
T ss_pred ccccc------------------CCCCCccCCHHHHHHHHHHcCCeEEEEEe
Confidence 43210 00011135789999999999999876664
No 47
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.34 E-value=5e-13 Score=111.75 Aligned_cols=115 Identities=19% Similarity=0.174 Sum_probs=82.5
Q ss_pred CcChHHHHHhhCCCCCCC----------C----------------------ceeEEEcCCCC-CCC-----CCCccceee
Q psy16312 2 CDNCESILSQAEPPEDTE----------V----------------------IYEKKFVDEEH-LPF-----AENSVDLLI 43 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~----------~----------------------~i~f~~~D~~~-l~~-----~~~~FD~Vi 43 (245)
+|+|+.|++.|++++... . .+.++++|++. +|+ ++++||+|+
T Consensus 100 vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~ 179 (289)
T 2g72_A 100 TDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRARVKRVLPIDVHQPQPLGAGSPAPLPADALV 179 (289)
T ss_dssp ECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHHHEEEEECCCTTSSSTTCSSCSSCSSEEEEE
T ss_pred eCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHhhhceEEecccCCCCCccccccCCCCCCEEE
Confidence 799999999887743210 0 14577779988 664 346799999
Q ss_pred ecccccc----cCChhHHHHHHHhhhcCCcEEEEEecCCCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhC
Q psy16312 44 SNLALHW----VNNLPGCFQQVLKCLRQDGVFLASIFGGETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRA 119 (245)
Q Consensus 44 s~~~l~~----~~d~~~~l~~i~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a 119 (245)
|+++|+| ++++..+|++++++|||||+|++.......... .+. ......+.+.+++.++|+++
T Consensus 180 ~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~~~~------------~~~-~~~~~~~~~~~~l~~~l~~a 246 (289)
T 2g72_A 180 SAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGALEESWYL------------AGE-ARLTVVPVSEEEVREALVRS 246 (289)
T ss_dssp EESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEEESCCEEE------------ETT-EEEECCCCCHHHHHHHHHHT
T ss_pred ehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEecCcceEE------------cCC-eeeeeccCCHHHHHHHHHHc
Confidence 9999999 667899999999999999999887422211000 000 11123456899999999999
Q ss_pred CCeeeEEEEE
Q psy16312 120 GFNMLTIDVD 129 (245)
Q Consensus 120 GF~~~~~~~~ 129 (245)
||+++.+...
T Consensus 247 Gf~~~~~~~~ 256 (289)
T 2g72_A 247 GYKVRDLRTY 256 (289)
T ss_dssp TEEEEEEEEE
T ss_pred CCeEEEeeEe
Confidence 9998776643
No 48
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.33 E-value=1.1e-11 Score=103.32 Aligned_cols=119 Identities=14% Similarity=0.113 Sum_probs=86.8
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeeccccccc--CChhHHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWV--NNLPGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~--~d~~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+|+.|++.|+++... ..++++.++|++++| ++||+|+|..+++|+ .++..++++++++|||||++++..+
T Consensus 93 vd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 93 LTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD---EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp EESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC---CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC---CCeeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 79999999999886431 247999999998876 789999999999999 6789999999999999999998875
Q ss_pred CCCcHHHH----------HHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 77 GGETLYEL----------RSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 77 ~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
........ ...+... +..+ ..+ ...+++.+++.++++++||+++.+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~-~~~~~s~~~~~~~l~~aGf~~~~~~ 226 (287)
T 1kpg_A 170 TGLHPKEIHERGLPMSFTFARFLKF-IVTE--IFP-GGRLPSIPMVQECASANGFTVTRVQ 226 (287)
T ss_dssp EECCHHHHTTTTCSCHHHHHHHHHH-HHHH--TST-TCCCCCHHHHHHHHHTTTCEEEEEE
T ss_pred cCCCccccccccccccccccchhhh-HHhe--eCC-CCCCCCHHHHHHHHHhCCcEEEEEE
Confidence 44332210 0001000 0000 011 1245689999999999999987665
No 49
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.33 E-value=2.2e-12 Score=107.27 Aligned_cols=113 Identities=7% Similarity=-0.002 Sum_probs=83.3
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCC-----------CCCCccceeeecccccccCC--hhHHHHHHHhhhcCC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLP-----------FAENSVDLLISNLALHWVNN--LPGCFQQVLKCLRQD 68 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~-----------~~~~~FD~Vis~~~l~~~~d--~~~~l~~i~r~LkpG 68 (245)
+|+|+.||+.|++++....+++|+++|+.+.+ ++.++||+|+++.+|||+++ +..+|++++++|+||
T Consensus 110 vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pG 189 (274)
T 2qe6_A 110 VDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPG 189 (274)
T ss_dssp EESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTT
T ss_pred EECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCC
Confidence 79999999999987654467999999997631 22358999999999999987 889999999999999
Q ss_pred cEEEEEecCCCc---HHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeE
Q psy16312 69 GVFLASIFGGET---LYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLT 125 (245)
Q Consensus 69 G~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~ 125 (245)
|+|+++.+.... ...+...+... + . ...+.+.+++.++| .||+++.
T Consensus 190 G~l~i~~~~~~~~~~~~~~~~~~~~~-----~---~-~~~~~s~~ei~~~l--~G~~l~~ 238 (274)
T 2qe6_A 190 SYLFMTSLVDTGLPAQQKLARITREN-----L---G-EGWARTPEEIERQF--GDFELVE 238 (274)
T ss_dssp CEEEEEEEBCSSCHHHHHHHHHHHHH-----H---S-CCCCBCHHHHHHTT--TTCEECT
T ss_pred cEEEEEEecCcchHHHHHHHHHHHhc-----C---C-CCccCCHHHHHHHh--CCCeEcc
Confidence 999998765532 11111111110 1 0 12356889999998 5998643
No 50
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.32 E-value=8.4e-13 Score=109.04 Aligned_cols=114 Identities=14% Similarity=0.107 Sum_probs=80.5
Q ss_pred CcChHHHHHhhCCCCCCC-------------------------------Ccee-EEEcCCCCC-CC---CCCccceeeec
Q psy16312 2 CDNCESILSQAEPPEDTE-------------------------------VIYE-KKFVDEEHL-PF---AENSVDLLISN 45 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~-------------------------------~~i~-f~~~D~~~l-~~---~~~~FD~Vis~ 45 (245)
+|+|+.|++.|++++... .++. ++++|+... |+ ..++||+|+|+
T Consensus 84 ~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~ 163 (263)
T 2a14_A 84 SDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTL 163 (263)
T ss_dssp EESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEE
T ss_pred ccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHHHhhhheEEeccccCCCCCCccccCCCCEeeeh
Confidence 799999999987643110 1233 889999873 43 25799999999
Q ss_pred cccccc----CChhHHHHHHHhhhcCCcEEEEEecCCCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCC
Q psy16312 46 LALHWV----NNLPGCFQQVLKCLRQDGVFLASIFGGETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGF 121 (245)
Q Consensus 46 ~~l~~~----~d~~~~l~~i~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF 121 (245)
++|||+ +++..++++++++|||||+|+++.+....... .+. ........+.+++.++|+++||
T Consensus 164 ~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~~~------------~g~-~~~~~~~~~~~~l~~~l~~aGF 230 (263)
T 2a14_A 164 LAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTLRLPSYM------------VGK-REFSCVALEKGEVEQAVLDAGF 230 (263)
T ss_dssp SCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCEEE------------ETT-EEEECCCCCHHHHHHHHHHTTE
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEeecCccce------------eCC-eEeeccccCHHHHHHHHHHCCC
Confidence 999996 35568999999999999999998643321100 011 0111124578999999999999
Q ss_pred eeeEEEE
Q psy16312 122 NMLTIDV 128 (245)
Q Consensus 122 ~~~~~~~ 128 (245)
+++.+..
T Consensus 231 ~i~~~~~ 237 (263)
T 2a14_A 231 DIEQLLH 237 (263)
T ss_dssp EEEEEEE
T ss_pred EEEEEee
Confidence 9866553
No 51
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.31 E-value=1.1e-12 Score=100.85 Aligned_cols=102 Identities=16% Similarity=0.119 Sum_probs=82.7
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCCcH
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGETL 81 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~~~ 81 (245)
+|+|+.|++.|+++. +++++.++| +++++++||+|+++.+++|++++..++++++++|||||++++..+.....
T Consensus 45 vD~s~~~~~~a~~~~---~~v~~~~~d---~~~~~~~~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 118 (170)
T 3i9f_A 45 IDINVIALKEVKEKF---DSVITLSDP---KEIPDNSVDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKENT 118 (170)
T ss_dssp ECSCHHHHHHHHHHC---TTSEEESSG---GGSCTTCEEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSCC
T ss_pred EeCCHHHHHHHHHhC---CCcEEEeCC---CCCCCCceEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCcccc
Confidence 799999999998873 479999999 77778899999999999999999999999999999999999987554320
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 82 YELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
...+......+.+++.++|+ ||+++...
T Consensus 119 ----------------~~~~~~~~~~~~~~~~~~l~--Gf~~~~~~ 146 (170)
T 3i9f_A 119 ----------------GIGPPLSIRMDEKDYMGWFS--NFVVEKRF 146 (170)
T ss_dssp ----------------SSSSCGGGCCCHHHHHHHTT--TEEEEEEE
T ss_pred ----------------ccCchHhhhcCHHHHHHHHh--CcEEEEcc
Confidence 00112223467889999988 99986654
No 52
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.30 E-value=2.8e-12 Score=105.51 Aligned_cols=71 Identities=10% Similarity=0.137 Sum_probs=63.9
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecc-cccccC---ChhHHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNL-ALHWVN---NLPGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~-~l~~~~---d~~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+|+.|++.|+++.+ ++.|+++|+.++++ +++||+|+|.. +++|++ +...++++++++|||||++++..+
T Consensus 78 vD~s~~~~~~a~~~~~---~~~~~~~d~~~~~~-~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 78 LELSADMLAIARRRNP---DAVLHHGDMRDFSL-GRRFSAVTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp EESCHHHHHHHHHHCT---TSEEEECCTTTCCC-SCCEEEEEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred EECCHHHHHHHHhhCC---CCEEEECChHHCCc-cCCcCEEEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 7999999999998765 79999999999988 58999999998 999996 556889999999999999999753
No 53
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.29 E-value=6.4e-12 Score=106.33 Aligned_cols=119 Identities=13% Similarity=0.081 Sum_probs=86.9
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeeccccccc--CChhHHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWV--NNLPGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~--~d~~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+|+.|++.|+++... ..++.+.++|+++++ ++||+|+|..+++|+ +++..++++++++|||||++++.++
T Consensus 119 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 119 LTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA---EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp EESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC---CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred EECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC---CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 79999999999886432 246999999998875 789999999999999 6789999999999999999998876
Q ss_pred CCCcHHHHH----------HHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 77 GGETLYELR----------SAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 77 ~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
......... ..+... +..+ ..+ ...+++.+++.++++++||+++.+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~-~~~~~s~~~~~~~l~~aGf~~~~~~ 252 (318)
T 2fk8_A 196 VSYHPYEMAARGKKLSFETARFIKF-IVTE--IFP-GGRLPSTEMMVEHGEKAGFTVPEPL 252 (318)
T ss_dssp ECCCHHHHHTTCHHHHHHHHHHHHH-HHHH--TST-TCCCCCHHHHHHHHHHTTCBCCCCE
T ss_pred ccCCchhhhhccccccccccchhhH-HHHh--cCC-CCcCCCHHHHHHHHHhCCCEEEEEE
Confidence 544322210 000000 0000 001 1245689999999999999987654
No 54
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.28 E-value=5.8e-12 Score=103.47 Aligned_cols=107 Identities=14% Similarity=0.150 Sum_probs=80.0
Q ss_pred CcChHHHHHhhCCCCC-------------------CCCceeEEEcCCCCCCCCC-CccceeeecccccccCC--hhHHHH
Q psy16312 2 CDNCESILSQAEPPED-------------------TEVIYEKKFVDEEHLPFAE-NSVDLLISNLALHWVNN--LPGCFQ 59 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~-------------------~~~~i~f~~~D~~~l~~~~-~~FD~Vis~~~l~~~~d--~~~~l~ 59 (245)
||+|+.||+.|+++.. ...+++|+++|+.++++.+ ++||+|++..+|++++. ...+++
T Consensus 96 vD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~ 175 (252)
T 2gb4_A 96 VEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDLPRANIGKFDRIWDRGALVAINPGDHDRYAD 175 (252)
T ss_dssp ECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTGGGGCCCCEEEEEESSSTTTSCGGGHHHHHH
T ss_pred EECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccCCcccCCCEEEEEEhhhhhhCCHHHHHHHHH
Confidence 7999999999976442 1357999999999998764 89999999999999964 457899
Q ss_pred HHHhhhcCCcEEEEEecCCCcHHHHHHHHHHHHHHhcCCCCCcccC-CCCHHHHHHHHHhCCCeeeEEE
Q psy16312 60 QVLKCLRQDGVFLASIFGGETLYELRSAVHLAEMERRGGVASHISP-FTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 60 ~i~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
+++++|||||++++.++.... ... . ..+ ..+.+++.+++.. +|+++...
T Consensus 176 ~~~~~LkpGG~l~l~~~~~~~-------------~~~----~-g~~~~~~~~el~~~l~~-~f~v~~~~ 225 (252)
T 2gb4_A 176 IILSLLRKEFQYLVAVLSYDP-------------TKH----A-GPPFYVPSAELKRLFGT-KCSMQCLE 225 (252)
T ss_dssp HHHHTEEEEEEEEEEEEECCT-------------TSC----C-CSSCCCCHHHHHHHHTT-TEEEEEEE
T ss_pred HHHHHcCCCeEEEEEEEecCC-------------ccC----C-CCCCCCCHHHHHHHhhC-CeEEEEEe
Confidence 999999999998754322111 000 0 112 2578899999976 69886655
No 55
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.28 E-value=6.8e-13 Score=110.85 Aligned_cols=120 Identities=15% Similarity=0.211 Sum_probs=87.3
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCC-CCCccceeeecccccc----cCChhHHHHHHHhhhcCCcEEEE
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPF-AENSVDLLISNLALHW----VNNLPGCFQQVLKCLRQDGVFLA 73 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~-~~~~FD~Vis~~~l~~----~~d~~~~l~~i~r~LkpGG~l~~ 73 (245)
+|+|+.|++.|++++.. ..++.++++|+.++++ .+++||+|+|..++|| ..++..++++++++|||||++++
T Consensus 93 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 172 (298)
T 1ri5_A 93 VDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIM 172 (298)
T ss_dssp EESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 79999999999886542 1468999999999988 5789999999999988 45678999999999999999999
Q ss_pred EecCCCcHHHHHHHHHHHHHHhcCC-----------C-C----------------CcccCCCCHHHHHHHHHhCCCeeeE
Q psy16312 74 SIFGGETLYELRSAVHLAEMERRGG-----------V-A----------------SHISPFTQIRDVGSLLTRAGFNMLT 125 (245)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~-----------~-~----------------~~~~~~~~~~~~~~~l~~aGF~~~~ 125 (245)
+++....+.. .+.. ..++. . . .....+.+.+++.++|+++||+++.
T Consensus 173 ~~~~~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll~~aGf~~v~ 246 (298)
T 1ri5_A 173 TVPSRDVILE---RYKQ---GRMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFKRLGLSLVE 246 (298)
T ss_dssp EEECHHHHHH---HHHH---TCCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHHHTTTEEEEE
T ss_pred EECCHHHHHH---HHcc---CccCCeeEEEEeCccccccccccceEEEEEchhhcCCcccccCHHHHHHHHHHcCCEEEE
Confidence 8854322211 1110 00000 0 0 0012356789999999999999865
Q ss_pred EE
Q psy16312 126 ID 127 (245)
Q Consensus 126 ~~ 127 (245)
..
T Consensus 247 ~~ 248 (298)
T 1ri5_A 247 RK 248 (298)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 56
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.27 E-value=4.5e-12 Score=101.31 Aligned_cols=117 Identities=8% Similarity=-0.151 Sum_probs=80.6
Q ss_pred CcChHHHHHhhCCCCCCC-------CceeEEEcCCCCCCCCCCccceeeecccccccCCh--hHHHHHHHhhhcCCcEEE
Q psy16312 2 CDNCESILSQAEPPEDTE-------VIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNL--PGCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~-------~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~--~~~l~~i~r~LkpGG~l~ 72 (245)
+|+|+.|++.|++++... .+++++++|+..++..+++||+|+|+.+++|++++ ..++++++++|||||.++
T Consensus 59 vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li 138 (217)
T 3jwh_A 59 VDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIV 138 (217)
T ss_dssp EESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEE
T ss_pred EECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 799999999998865421 27999999998888777899999999999999866 799999999999999777
Q ss_pred EEecCCCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHH----HHHHhCCCeeeE
Q psy16312 73 ASIFGGETLYELRSAVHLAEMERRGGVASHISPFTQIRDVG----SLLTRAGFNMLT 125 (245)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~aGF~~~~ 125 (245)
++... .....+... ..............+..++. ++++++||+++.
T Consensus 139 ~~~~~-----~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~Gf~v~~ 188 (217)
T 3jwh_A 139 TTPNI-----EYNVKFANL--PAGKLRHKDHRFEWTRSQFQNWANKITERFAYNVQF 188 (217)
T ss_dssp EEEBH-----HHHHHTC-------------CCSCBCHHHHHHHHHHHHHHSSEEEEE
T ss_pred EccCc-----ccchhhccc--ccccccccccccccCHHHHHHHHHHHHHHcCceEEE
Confidence 66421 111111000 00000001111234677777 888899998743
No 57
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.26 E-value=1.2e-12 Score=106.16 Aligned_cols=76 Identities=24% Similarity=0.333 Sum_probs=66.0
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCCCCCCCccceeeecc-ccccc---CChhHHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHLPFAENSVDLLISNL-ALHWV---NNLPGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~-~l~~~---~d~~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+|+.|++.|+++... ..++.+.++|+.+++++ ++||+|+++. +++|+ .++..++++++++|||||+++++++
T Consensus 65 ~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 143 (246)
T 1y8c_A 65 VDLSQEMLSEAENKFRSQGLKPRLACQDISNLNIN-RKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFDIN 143 (246)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCS-CCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHhhcCCCeEEEecccccCCcc-CCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 79999999999886542 13799999999999887 8999999998 99999 5678999999999999999999875
Q ss_pred CC
Q psy16312 77 GG 78 (245)
Q Consensus 77 ~~ 78 (245)
.+
T Consensus 144 ~~ 145 (246)
T 1y8c_A 144 SY 145 (246)
T ss_dssp CH
T ss_pred CH
Confidence 43
No 58
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.26 E-value=1.4e-11 Score=101.91 Aligned_cols=127 Identities=9% Similarity=0.020 Sum_probs=87.9
Q ss_pred CcChHH------HHHhhCCCCCC---CCceeEEEcC---CCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCc
Q psy16312 2 CDNCES------ILSQAEPPEDT---EVIYEKKFVD---EEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDG 69 (245)
Q Consensus 2 iD~S~~------ml~~A~~~~~~---~~~i~f~~~D---~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG 69 (245)
+|+|+. |++.|++++.. ..+++++++| ...+|+++++||+|+|+.+++|++++..+++.+.++++|||
T Consensus 74 vD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG 153 (275)
T 3bkx_A 74 IDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPIADQHFDRVVLAHSLWYFASANALALLFKNMAAVCD 153 (275)
T ss_dssp ECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGGTTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCS
T ss_pred EECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCCCCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCC
Confidence 688886 99999876532 2579999998 55677778999999999999999999987777777777899
Q ss_pred EEEEEecCCC-----cHHHHHHHHHHHHHHhcC-CCCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 70 VFLASIFGGE-----TLYELRSAVHLAEMERRG-GVASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 70 ~l~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
++++..+... ........+......... ........+++..++.++++++||+++....
T Consensus 154 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~l~~aGf~~~~~~~ 218 (275)
T 3bkx_A 154 HVDVAEWSMQPTALDQIGHLQAAMIQGLLYAIAPSDVANIRTLITPDTLAQIAHDNTWTYTAGTI 218 (275)
T ss_dssp EEEEEEECSSCSSGGGHHHHHHHHHHHHHHHHSCCTTCSCCCCCCHHHHHHHHHHHTCEEEECCC
T ss_pred EEEEEEecCCCCchhhhhHHHHHHHHHHHhhccccccccccccCCHHHHHHHHHHCCCeeEEEEE
Confidence 9998765432 112211111111111111 1112233467899999999999999876553
No 59
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.26 E-value=8.8e-13 Score=115.84 Aligned_cols=118 Identities=12% Similarity=0.092 Sum_probs=85.0
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCCcH
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGETL 81 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~~~ 81 (245)
+|+|+.|++.|+++........|...+++.+++++++||+|+|+.+|+|++|+..++++++++|||||+++++++....
T Consensus 135 vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~fD~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~- 213 (416)
T 4e2x_A 135 FEPSSGVAAKAREKGIRVRTDFFEKATADDVRRTEGPANVIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDPYLGD- 213 (416)
T ss_dssp ECCCHHHHHHHHTTTCCEECSCCSHHHHHHHHHHHCCEEEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEECHHH-
T ss_pred ECCCHHHHHHHHHcCCCcceeeechhhHhhcccCCCCEEEEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeCChHH-
Confidence 7999999999998732111122444566667777789999999999999999999999999999999999998743211
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 82 YELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
+ ... ..+.........+++...+.++++++||+++.+..
T Consensus 214 --~---~~~---~~~~~~~~~~~~~~s~~~l~~ll~~aGf~~~~~~~ 252 (416)
T 4e2x_A 214 --I---VAK---TSFDQIFDEHFFLFSATSVQGMAQRCGFELVDVQR 252 (416)
T ss_dssp --H---HHH---TCGGGCSTTCCEECCHHHHHHHHHHTTEEEEEEEE
T ss_pred --h---hhh---cchhhhhhhhhhcCCHHHHHHHHHHcCCEEEEEEE
Confidence 1 110 11111111122356899999999999999877664
No 60
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.26 E-value=5.4e-12 Score=103.61 Aligned_cols=114 Identities=15% Similarity=0.100 Sum_probs=84.4
Q ss_pred CcChHHHHHhhCCCCCCCC-------------------------------ce-eEEEcCCCCCC-CCC---Cccceeeec
Q psy16312 2 CDNCESILSQAEPPEDTEV-------------------------------IY-EKKFVDEEHLP-FAE---NSVDLLISN 45 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~-------------------------------~i-~f~~~D~~~l~-~~~---~~FD~Vis~ 45 (245)
+|+|+.|++.|+++..... ++ .+.++|+.+++ +.+ ++||+|+|+
T Consensus 85 vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~ 164 (265)
T 2i62_A 85 SDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRRAIKQVLKCDVTQSQPLGGVSLPPADCLLST 164 (265)
T ss_dssp EESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEE
T ss_pred ecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhhhheeEEEeeeccCCCCCccccCCccEEEEh
Confidence 7999999999987654322 27 89999998864 355 899999999
Q ss_pred cccc----ccCChhHHHHHHHhhhcCCcEEEEEecCCCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCC
Q psy16312 46 LALH----WVNNLPGCFQQVLKCLRQDGVFLASIFGGETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGF 121 (245)
Q Consensus 46 ~~l~----~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF 121 (245)
.+++ +++++..++++++++|||||++++..+..... + ..+. ........+.+++.++|+++||
T Consensus 165 ~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~------~------~~~~-~~~~~~~~~~~~~~~~l~~aGf 231 (265)
T 2i62_A 165 LCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDALKSSY------Y------MIGE-QKFSSLPLGWETVRDAVEEAGY 231 (265)
T ss_dssp SCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEESSCCE------E------EETT-EEEECCCCCHHHHHHHHHHTTC
T ss_pred hhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecCCCce------E------EcCC-ccccccccCHHHHHHHHHHCCC
Confidence 9999 66678899999999999999999886433210 0 0000 1112234578899999999999
Q ss_pred eeeEEEE
Q psy16312 122 NMLTIDV 128 (245)
Q Consensus 122 ~~~~~~~ 128 (245)
+++.+..
T Consensus 232 ~~~~~~~ 238 (265)
T 2i62_A 232 TIEQFEV 238 (265)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9876654
No 61
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.25 E-value=1.7e-12 Score=109.03 Aligned_cols=78 Identities=14% Similarity=0.141 Sum_probs=65.5
Q ss_pred CcChHHHHHhhCCCCCCC-----CceeEEEcCCCCCCCCCCccceeee-cccccccC--ChhHHHHHHHhhhcCCcEEEE
Q psy16312 2 CDNCESILSQAEPPEDTE-----VIYEKKFVDEEHLPFAENSVDLLIS-NLALHWVN--NLPGCFQQVLKCLRQDGVFLA 73 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~-----~~i~f~~~D~~~l~~~~~~FD~Vis-~~~l~~~~--d~~~~l~~i~r~LkpGG~l~~ 73 (245)
+|+|+.|++.|++++... .+++|+++|+.++++ +++||+|+| ..+++|++ +...+|++++++|||||+|++
T Consensus 110 vD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~ 188 (299)
T 3g2m_A 110 LELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-DKRFGTVVISSGSINELDEADRRGLYASVREHLEPGGKFLL 188 (299)
T ss_dssp EESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-SCCEEEEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-CCCcCEEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 799999999999876532 469999999999998 589998886 46778775 357999999999999999999
Q ss_pred EecCCCc
Q psy16312 74 SIFGGET 80 (245)
Q Consensus 74 ~~~~~~~ 80 (245)
.++.+..
T Consensus 189 ~~~~~~~ 195 (299)
T 3g2m_A 189 SLAMSEA 195 (299)
T ss_dssp EEECCHH
T ss_pred EeecCcc
Confidence 9876543
No 62
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.25 E-value=5.9e-12 Score=99.39 Aligned_cols=117 Identities=17% Similarity=0.188 Sum_probs=87.1
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCCc
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGET 80 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~~ 80 (245)
+|+|+.|++.|+++... ..++.+.++|+.++++++++||+|+|+....+..++..++++++++|||||++++.++....
T Consensus 57 vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 136 (202)
T 2kw5_A 57 VDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPEQ 136 (202)
T ss_dssp ECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTTT
T ss_pred EECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEecccc
Confidence 79999999999887532 23799999999999988889999999654222346789999999999999999999876544
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEEEeEE
Q psy16312 81 LYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDVDEIV 132 (245)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~~~~ 132 (245)
.. + ..+. ......+.+.+++.++|+ ||+++.+......
T Consensus 137 ~~-----~------~~~~-~~~~~~~~~~~~l~~~l~--Gf~v~~~~~~~~~ 174 (202)
T 2kw5_A 137 LQ-----Y------NTGG-PKDLDLLPKLETLQSELP--SLNWLIANNLERN 174 (202)
T ss_dssp GG-----G------TSCC-SSSGGGCCCHHHHHHHCS--SSCEEEEEEEEEE
T ss_pred cc-----C------CCCC-CCcceeecCHHHHHHHhc--CceEEEEEEEEee
Confidence 21 0 0011 112234678999999998 9999877755443
No 63
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.25 E-value=4e-12 Score=101.41 Aligned_cols=75 Identities=12% Similarity=0.118 Sum_probs=67.4
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCCh---hHHHHHHHhhhcCCcEEEEEecC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNL---PGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~---~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+|+|+.|++.|+++.....+++++++|+++++ ++++||+|+|+.+++|++++ ..++++++++|||||+++++++.
T Consensus 79 vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~-~~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 156 (216)
T 3ofk_A 79 IDVMPRAIGRACQRTKRWSHISWAATDILQFS-TAELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSAR 156 (216)
T ss_dssp EESCHHHHHHHHHHTTTCSSEEEEECCTTTCC-CSCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EECCHHHHHHHHHhcccCCCeEEEEcchhhCC-CCCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEecC
Confidence 79999999999998765568999999999998 56899999999999999988 46799999999999999998743
No 64
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.24 E-value=5.8e-12 Score=103.93 Aligned_cols=117 Identities=15% Similarity=0.104 Sum_probs=82.8
Q ss_pred CcChHHHHHhhCCCCCC--CCceeEEEcCCCCCC------CCCCccc-----eeeecccccccCC---hhHHHHHHHhhh
Q psy16312 2 CDNCESILSQAEPPEDT--EVIYEKKFVDEEHLP------FAENSVD-----LLISNLALHWVNN---LPGCFQQVLKCL 65 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~--~~~i~f~~~D~~~l~------~~~~~FD-----~Vis~~~l~~~~d---~~~~l~~i~r~L 65 (245)
+|.|+.||+.|++++.. ..+++|+++|+.+++ ...++|| .|+++.+|||++| +..++++++++|
T Consensus 111 VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L 190 (277)
T 3giw_A 111 VDNDPIVLTLSQGLLASTPEGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPL 190 (277)
T ss_dssp EECCHHHHHTTHHHHCCCSSSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTS
T ss_pred EeCChHHHHHHHHHhccCCCCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhC
Confidence 79999999999987653 236999999998863 1135566 5889999999988 468999999999
Q ss_pred cCCcEEEEEecCCCcH-HHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEE
Q psy16312 66 RQDGVFLASIFGGETL-YELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTI 126 (245)
Q Consensus 66 kpGG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~ 126 (245)
+|||+|+++.+..... ......... +...+. ...+.+.+++..+|. ||+.+..
T Consensus 191 ~PGG~Lvls~~~~d~~p~~~~~~~~~--~~~~g~----p~~~rs~~ei~~~f~--GlelveP 244 (277)
T 3giw_A 191 PSGSYLAMSIGTAEFAPQEVGRVARE--YAARNM----PMRLRTHAEAEEFFE--GLELVEP 244 (277)
T ss_dssp CTTCEEEEEEECCTTSHHHHHHHHHH--HHHTTC----CCCCCCHHHHHHTTT--TSEECTT
T ss_pred CCCcEEEEEeccCCCCHHHHHHHHHH--HHhcCC----CCccCCHHHHHHHhC--CCcccCC
Confidence 9999999997665421 222221111 111111 134678999999984 9986543
No 65
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.24 E-value=3.6e-12 Score=101.95 Aligned_cols=74 Identities=9% Similarity=-0.039 Sum_probs=64.1
Q ss_pred CcChHHHHHhhCCCCCCC-------CceeEEEcCCCCCCCCCCccceeeecccccccCCh--hHHHHHHHhhhcCCcEEE
Q psy16312 2 CDNCESILSQAEPPEDTE-------VIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNL--PGCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~-------~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~--~~~l~~i~r~LkpGG~l~ 72 (245)
+|+|+.|++.|++++... .+++++++|+..+++.+++||+|+|+.+++|++++ ..++++++++|||||.++
T Consensus 59 vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i 138 (219)
T 3jwg_A 59 VDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIV 138 (219)
T ss_dssp EESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEE
T ss_pred EECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEE
Confidence 799999999999875421 17999999998888877899999999999999866 699999999999999766
Q ss_pred EEe
Q psy16312 73 ASI 75 (245)
Q Consensus 73 ~~~ 75 (245)
.+.
T Consensus 139 ~~~ 141 (219)
T 3jwg_A 139 STP 141 (219)
T ss_dssp EEE
T ss_pred Ecc
Confidence 654
No 66
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.23 E-value=4e-12 Score=101.70 Aligned_cols=119 Identities=14% Similarity=0.149 Sum_probs=85.6
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCC---CCCC-CccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHL---PFAE-NSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l---~~~~-~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+|+|+.|++.|+++ .++.+.++|+.++ ++.. ++||+|+|+.+++ ..++..++++++++|||||+++++++.
T Consensus 80 vD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~l~-~~~~~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 80 VDGDRTLVDAARAA----GAGEVHLASYAQLAEAKVPVGKDYDLICANFALL-HQDIIELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp EESCHHHHHHHHHT----CSSCEEECCHHHHHTTCSCCCCCEEEEEEESCCC-SSCCHHHHHHHHHTEEEEEEEEEEECC
T ss_pred EcCCHHHHHHHHHh----cccccchhhHHhhcccccccCCCccEEEECchhh-hhhHHHHHHHHHHHhCCCeEEEEEecC
Confidence 79999999999887 3578888888776 5443 4599999999999 889999999999999999999999865
Q ss_pred CCcHHHH--HHHHHHHHHHhcCC----CCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 78 GETLYEL--RSAVHLAEMERRGG----VASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 78 ~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
+...... ...+. ...+.. ..+....+.+.+++.++|+++||+++.+..
T Consensus 155 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGf~~~~~~~ 208 (227)
T 3e8s_A 155 PWSVADGDYQDGWR---EESFAGFAGDWQPMPWYFRTLASWLNALDMAGLRLVSLQE 208 (227)
T ss_dssp TTTTCTTCCSCEEE---EECCTTSSSCCCCEEEEECCHHHHHHHHHHTTEEEEEEEC
T ss_pred ccccCccccccccc---hhhhhccccCcccceEEEecHHHHHHHHHHcCCeEEEEec
Confidence 5332110 00000 000000 011223356899999999999999876553
No 67
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.21 E-value=3.2e-12 Score=107.18 Aligned_cols=100 Identities=13% Similarity=0.111 Sum_probs=67.0
Q ss_pred CceeEEEcCCCCCC-----CCCCccceeeecccccccC------ChhHHHHHHHhhhcCCcEEEEEecCCCcHHHHHHHH
Q psy16312 20 VIYEKKFVDEEHLP-----FAENSVDLLISNLALHWVN------NLPGCFQQVLKCLRQDGVFLASIFGGETLYELRSAV 88 (245)
Q Consensus 20 ~~i~f~~~D~~~l~-----~~~~~FD~Vis~~~l~~~~------d~~~~l~~i~r~LkpGG~l~~~~~~~~~~~~~~~~~ 88 (245)
.+++|+++|+...+ +.+++||+|+|..+++|+. ++..++++++++|||||+|++......+........
T Consensus 154 ~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~~~~~LkpGG~lil~~~~~~~y~~~~~~~ 233 (292)
T 3g07_A 154 NNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRRIYRHLRPGGILVLEPQPWSSYGKRKTLT 233 (292)
T ss_dssp TTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCCHHHHHTTTTSC
T ss_pred ccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHHHHHHhCCCcEEEEecCCchhhhhhhccc
Confidence 37999999998654 5678999999999999985 778999999999999999999853221111000000
Q ss_pred HHHHHHhcCCCCCcccCCCCHHHHHHHHHh--CCCeeeEE
Q psy16312 89 HLAEMERRGGVASHISPFTQIRDVGSLLTR--AGFNMLTI 126 (245)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--aGF~~~~~ 126 (245)
... ...+ ..-...++++..+|.+ +||..+.+
T Consensus 234 ~~~-~~~~------~~~~~~p~~~~~~L~~~~~GF~~~~~ 266 (292)
T 3g07_A 234 ETI-YKNY------YRIQLKPEQFSSYLTSPDVGFSSYEL 266 (292)
T ss_dssp HHH-HHHH------HHCCCCGGGHHHHHTSTTTCCCEEEE
T ss_pred HHH-Hhhh------hcEEEcHHHHHHHHHhcCCCceEEEE
Confidence 000 0000 0011236788999998 99987543
No 68
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.18 E-value=6.8e-11 Score=97.49 Aligned_cols=118 Identities=15% Similarity=0.140 Sum_probs=84.6
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCCcH
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGETL 81 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~~~ 81 (245)
+|+|+.|++.|+++.+ ++.|.++|++.+++.+++||+|+++.+. ..+++++++|||||++++.+++...+
T Consensus 115 vD~s~~~~~~a~~~~~---~~~~~~~d~~~~~~~~~~fD~v~~~~~~-------~~l~~~~~~L~pgG~l~~~~~~~~~~ 184 (269)
T 1p91_A 115 LDVSKVAIKAAAKRYP---QVTFCVASSHRLPFSDTSMDAIIRIYAP-------CKAEELARVVKPGGWVITATPGPRHL 184 (269)
T ss_dssp EESCHHHHHHHHHHCT---TSEEEECCTTSCSBCTTCEEEEEEESCC-------CCHHHHHHHEEEEEEEEEEEECTTTT
T ss_pred EeCCHHHHHHHHHhCC---CcEEEEcchhhCCCCCCceeEEEEeCCh-------hhHHHHHHhcCCCcEEEEEEcCHHHH
Confidence 7999999999988763 6899999999999988999999987653 35899999999999999998776655
Q ss_pred HHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEEEeEEEeCCCHHHHHHHHh
Q psy16312 82 YELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDVDEIVIHYPSMFELMWDLK 146 (245)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~~~~~~~~~~~~~~~~l~ 146 (245)
.++...+ ......... ..+..+||+++..........++ ..++...+.
T Consensus 185 ~~~~~~~-----------~~~~~~~~~-----~~~~~~gf~~~~~~~~~~~~~~~-~~~~~~~~~ 232 (269)
T 1p91_A 185 MELKGLI-----------YNEVHLHAP-----HAEQLEGFTLQQSAELCYPMRLR-GDEAVALLQ 232 (269)
T ss_dssp HHHHTTT-----------CSSCCCCCC-----CCCCCTTEEEEEEEEEEEEEEEE-HHHHHHHHH
T ss_pred HHHHHHh-----------hcccccccc-----hhhHhcCCcEEEEEEEEEEEEcC-HHHHHHHhc
Confidence 4432111 111111111 23446899998887777777664 355555444
No 69
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.18 E-value=3.3e-11 Score=93.93 Aligned_cols=97 Identities=14% Similarity=0.093 Sum_probs=80.4
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeec-ccccccC--ChhHHHHHHHhhhcCCcEEEEEecCC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISN-LALHWVN--NLPGCFQQVLKCLRQDGVFLASIFGG 78 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~-~~l~~~~--d~~~~l~~i~r~LkpGG~l~~~~~~~ 78 (245)
+|+|+.|++.|+++.+ ++.+.++|+.++++++++||+|+++ .++++++ +...++++++++|+|||.+++.....
T Consensus 74 ~D~~~~~~~~a~~~~~---~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~~~ 150 (195)
T 3cgg_A 74 TDLDPILIDYAKQDFP---EARWVVGDLSVDQISETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFGAG 150 (195)
T ss_dssp EESCHHHHHHHHHHCT---TSEEEECCTTTSCCCCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEETT
T ss_pred EcCCHHHHHHHHHhCC---CCcEEEcccccCCCCCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 7999999999988764 6899999999988888899999998 7888884 45789999999999999999876322
Q ss_pred CcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 79 ETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
. ..+...+.++++++||+++...
T Consensus 151 ~--------------------------~~~~~~~~~~l~~~Gf~~~~~~ 173 (195)
T 3cgg_A 151 R--------------------------GWVFGDFLEVAERVGLELENAF 173 (195)
T ss_dssp S--------------------------SCCHHHHHHHHHHHTEEEEEEE
T ss_pred C--------------------------CcCHHHHHHHHHHcCCEEeeee
Confidence 1 1356788999999999875544
No 70
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.17 E-value=5.9e-11 Score=101.08 Aligned_cols=116 Identities=13% Similarity=0.039 Sum_probs=81.7
Q ss_pred CcChHHHHHhhCCCCC---CCCceeEEEcCCCCCCCCCCccceeeecccccccCCh--hHHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPED---TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNL--PGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~---~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~--~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+ +.|++.|+++.. ...+++|+.+|+. .+++. +||+|++..++|+++|+ .++|++++++|+|||++++..+
T Consensus 199 ~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 275 (332)
T 3i53_A 199 LDL-QGPASAAHRRFLDTGLSGRAQVVVGSFF-DPLPA-GAGGYVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEA 275 (332)
T ss_dssp EEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-SCCCC-SCSEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred ecC-HHHHHHHHHhhhhcCcCcCeEEecCCCC-CCCCC-CCcEEEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEee
Confidence 588 999999987532 1257999999997 45553 89999999999999885 7899999999999999988754
Q ss_pred CCCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 77 GGETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
..... .....+....+.. .....++.++|.++|+++||+++.+.
T Consensus 276 ~~~~~-~~~~~~d~~~~~~------~~~~~~t~~e~~~ll~~aGf~~~~~~ 319 (332)
T 3i53_A 276 VAGDE-HAGTGMDLRMLTY------FGGKERSLAELGELAAQAGLAVRAAH 319 (332)
T ss_dssp CCC----CCHHHHHHHHHH------HSCCCCCHHHHHHHHHHTTEEEEEEE
T ss_pred cCCCC-CccHHHHHHHHhh------CCCCCCCHHHHHHHHHHCCCEEEEEE
Confidence 32211 1000111111111 11234578999999999999987654
No 71
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.17 E-value=2.8e-11 Score=97.74 Aligned_cols=72 Identities=13% Similarity=0.135 Sum_probs=62.4
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeec-ccccccCC---hhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISN-LALHWVNN---LPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~-~~l~~~~d---~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+|+|+.|++.|+++.+ ++.+.++|+.++++ +++||+|+|. .+++|+++ ...++++++++|||||+++++.+.
T Consensus 68 ~D~s~~~~~~a~~~~~---~~~~~~~d~~~~~~-~~~~D~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 143 (239)
T 3bxo_A 68 LELSEDMLTHARKRLP---DATLHQGDMRDFRL-GRKFSAVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWW 143 (239)
T ss_dssp EESCHHHHHHHHHHCT---TCEEEECCTTTCCC-SSCEEEEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCC
T ss_pred EeCCHHHHHHHHHhCC---CCEEEECCHHHccc-CCCCcEEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecc
Confidence 7999999999988764 68999999999887 5899999964 49999954 568999999999999999998643
No 72
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.17 E-value=1.1e-11 Score=100.39 Aligned_cols=76 Identities=18% Similarity=0.243 Sum_probs=64.5
Q ss_pred CcChHHHHHhhCCCCC-CCCceeEEEcCCCCCCCCCCccceeeecc-cccccC---ChhHHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPED-TEVIYEKKFVDEEHLPFAENSVDLLISNL-ALHWVN---NLPGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~-~~~~i~f~~~D~~~l~~~~~~FD~Vis~~-~l~~~~---d~~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+|+.|++.|+++.. ...++++.++|+.+++++ ++||+|++.. +++|+. ++..++++++++|||||+++++++
T Consensus 60 vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 138 (243)
T 3d2l_A 60 VDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELP-EPVDAITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFDVH 138 (243)
T ss_dssp EESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCS-SCEEEEEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCC-CCcCEEEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEEcC
Confidence 7999999999988643 125799999999998876 8999999987 999994 566899999999999999999875
Q ss_pred CC
Q psy16312 77 GG 78 (245)
Q Consensus 77 ~~ 78 (245)
.+
T Consensus 139 ~~ 140 (243)
T 3d2l_A 139 SP 140 (243)
T ss_dssp CH
T ss_pred CH
Confidence 43
No 73
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.15 E-value=8e-12 Score=99.02 Aligned_cols=124 Identities=11% Similarity=0.148 Sum_probs=85.9
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCCCCCCCccceeeeccccccc--CChhHHHHHHHhhhcCCcEEEEEecCC
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHLPFAENSVDLLISNLALHWV--NNLPGCFQQVLKCLRQDGVFLASIFGG 78 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~--~d~~~~l~~i~r~LkpGG~l~~~~~~~ 78 (245)
+|+|+.|++.|++++.. ..++.+.++|++++++++++||+|+|..+++|+ .++..++++++++|||||++++..+..
T Consensus 52 vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 52 IEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp EECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred EECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 79999999999886431 257899999999999888999999999999999 678899999999999999999987643
Q ss_pred CcHHHHH-HHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeE
Q psy16312 79 ETLYELR-SAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLT 125 (245)
Q Consensus 79 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~ 125 (245)
....... ..+............+....+.+.+++.+++.+.||....
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~g~~~~~ 179 (209)
T 2p8j_A 132 KDERYNKGEKIGEGEFLQLERGEKVIHSYVSLEEADKYFKDMKVLFKE 179 (209)
T ss_dssp TSTTTTCSEEEETTEEEECC-CCCEEEEEECHHHHHHTTTTSEEEEEE
T ss_pred cchhccchhhhccccceeccCCCceeEEecCHHHHHHHHhhcCceeee
Confidence 2211000 0000000000000011122356788899999888887543
No 74
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.15 E-value=3.4e-11 Score=94.46 Aligned_cols=109 Identities=14% Similarity=0.252 Sum_probs=82.6
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCCCccceeeecccccccC--ChhHHHHHHHhhhcCCcEEEEEe-c
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVN--NLPGCFQQVLKCLRQDGVFLASI-F 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~--d~~~~l~~i~r~LkpGG~l~~~~-~ 76 (245)
+|+|+.|++.|+++.. ...++.+.++|+.++++ +++||+|+++.+++|++ ++..++++++++|||||++++.. .
T Consensus 60 vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 138 (199)
T 2xvm_A 60 WDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-DRQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAAM 138 (199)
T ss_dssp EESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-CCCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred EECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-CCCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEee
Confidence 7999999999987643 22479999999999988 78999999999999998 78899999999999999977654 2
Q ss_pred CCCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEEE
Q psy16312 77 GGETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDVD 129 (245)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~ 129 (245)
..... .. ........+.+++.++|.+ |+++.....
T Consensus 139 ~~~~~---------------~~-~~~~~~~~~~~~l~~~~~~--f~~~~~~~~ 173 (199)
T 2xvm_A 139 DTADY---------------PC-TVGFPFAFKEGELRRYYEG--WERVKYNED 173 (199)
T ss_dssp CCSSS---------------CC-CSCCSCCBCTTHHHHHTTT--SEEEEEECC
T ss_pred ccCCc---------------CC-CCCCCCccCHHHHHHHhcC--CeEEEeccc
Confidence 22110 00 1111224577889998875 988776644
No 75
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.14 E-value=4.4e-11 Score=103.26 Aligned_cols=123 Identities=11% Similarity=0.045 Sum_probs=83.2
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCC--CCCCCccceeeecccccccCChh--HHHHHHHhhhcCCcEEEEE
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHL--PFAENSVDLLISNLALHWVNNLP--GCFQQVLKCLRQDGVFLAS 74 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l--~~~~~~FD~Vis~~~l~~~~d~~--~~l~~i~r~LkpGG~l~~~ 74 (245)
+|+ +.|++.|++++.. ..+++|+.+|+.+. |++ ++||+|++..+||++++.. .+|++++++|||||++++.
T Consensus 209 ~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p-~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~ 286 (363)
T 3dp7_A 209 VDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP-TGFDAVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIM 286 (363)
T ss_dssp EEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC-CCCSEEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred EeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC-CCcCEEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 688 9999999886442 24799999999886 566 7899999999999887764 7899999999999999876
Q ss_pred ecC-C-CcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 75 IFG-G-ETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 75 ~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
... + .........+........ .........++.++|.++|+++||+++.+.
T Consensus 287 e~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~t~~e~~~ll~~AGf~~v~~~ 340 (363)
T 3dp7_A 287 ETLWDRQRYETASYCLTQISLYFT-AMANGNSKMFHSDDLIRCIENAGLEVEEIQ 340 (363)
T ss_dssp ECCTTSCSSHHHHHHHHHHHHHHH-HSSCSSCCSCCHHHHHHHHHTTTEEESCCC
T ss_pred eeccCCccccchhhHHHHhhhhHH-hhhCCCCcccCHHHHHHHHHHcCCeEEEEE
Confidence 532 2 111111000000000000 001112235689999999999999986543
No 76
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.14 E-value=6.6e-11 Score=96.18 Aligned_cols=122 Identities=13% Similarity=0.038 Sum_probs=84.3
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCC-----CccceeeecccccccC--ChhHHHHHHHhhhcCCcEEEEE
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAE-----NSVDLLISNLALHWVN--NLPGCFQQVLKCLRQDGVFLAS 74 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~-----~~FD~Vis~~~l~~~~--d~~~~l~~i~r~LkpGG~l~~~ 74 (245)
+|+|+.|++.|++++.. .+++|+++|+.++++.. ..||+|+++.++||++ ++..++++++++|||||++++.
T Consensus 84 vD~s~~~~~~a~~~~~~-~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 162 (245)
T 3ggd_A 84 LDVSKSALEIAAKENTA-ANISYRLLDGLVPEQAAQIHSEIGDANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLI 162 (245)
T ss_dssp EESCHHHHHHHHHHSCC-TTEEEEECCTTCHHHHHHHHHHHCSCEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEE
T ss_pred EECCHHHHHHHHHhCcc-cCceEEECcccccccccccccccCccEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 79999999999987743 57999999999876431 2499999999999998 7889999999999999998887
Q ss_pred ecCCCcHHHHHHHHHHH-----HHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 75 IFGGETLYELRSAVHLA-----EMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 75 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
.+.......+....... ....... ........+.+++.+++ +||+++...
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~--aGf~~~~~~ 217 (245)
T 3ggd_A 163 ELGTGCIDFFNSLLEKYGQLPYELLLVME-HGIRPGIFTAEDIELYF--PDFEILSQG 217 (245)
T ss_dssp EECTTHHHHHHHHHHHHSSCCHHHHHHHT-TTCCCCCCCHHHHHHHC--TTEEEEEEE
T ss_pred eCCccccHHHHHHHhCCCCCchhhhhccc-cCCCCCccCHHHHHHHh--CCCEEEecc
Confidence 76554322221111100 0000000 00011235788899988 899986544
No 77
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.11 E-value=7.2e-12 Score=105.59 Aligned_cols=77 Identities=9% Similarity=0.163 Sum_probs=62.0
Q ss_pred CcChHHHHHhhCCCCCC-CC-------ceeEEEcCC------CCC--CCCCCccceeeeccccccc---CChhHHHHHHH
Q psy16312 2 CDNCESILSQAEPPEDT-EV-------IYEKKFVDE------EHL--PFAENSVDLLISNLALHWV---NNLPGCFQQVL 62 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~-------~i~f~~~D~------~~l--~~~~~~FD~Vis~~~l~~~---~d~~~~l~~i~ 62 (245)
+|+|+.||+.|++++.. .. +++|.+.|+ +.+ ++++++||+|+|.+++||+ .+...+|++++
T Consensus 77 iD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~ 156 (302)
T 2vdw_A 77 TDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYFGKFNIIDWQFAIHYSFHPRHYATVMNNLS 156 (302)
T ss_dssp EESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCSSCEEEEEEESCGGGTCSTTTHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccCCCeeEEEECchHHHhCCHHHHHHHHHHHH
Confidence 79999999999987542 11 367889888 333 3456899999999999986 35679999999
Q ss_pred hhhcCCcEEEEEecCC
Q psy16312 63 KCLRQDGVFLASIFGG 78 (245)
Q Consensus 63 r~LkpGG~l~~~~~~~ 78 (245)
++|||||+|+++++..
T Consensus 157 r~LkpGG~~i~~~~~~ 172 (302)
T 2vdw_A 157 ELTASGGKVLITTMDG 172 (302)
T ss_dssp HHEEEEEEEEEEEECH
T ss_pred HHcCCCCEEEEEeCCH
Confidence 9999999999988543
No 78
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.11 E-value=1.3e-10 Score=98.87 Aligned_cols=119 Identities=15% Similarity=0.160 Sum_probs=84.2
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeecccccccCCh--hHHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNL--PGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~--~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+| .|++.|+++... ..+++|+++|+.+.+++. .||+|++..++|++++. ..++++++++|+|||++++..+
T Consensus 195 ~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 272 (335)
T 2r3s_A 195 VDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGN-DYDLVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDF 272 (335)
T ss_dssp EECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCS-CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCC-CCcEEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEee
Confidence 6999 999999886431 246999999999887764 49999999999999654 6899999999999999887754
Q ss_pred CCCc---HHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 77 GGET---LYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 77 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
.... .......+....... .......+.++|.++++++||+.+.+.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~t~~~~~~ll~~aGf~~~~~~ 321 (335)
T 2r3s_A 273 IPNSDRITPPDAAAFSLVMLAT-----TPNGDAYTFAEYESMFSNAGFSHSQLH 321 (335)
T ss_dssp CCCTTSSCSHHHHHHHHHHHHH-----SSSCCCCCHHHHHHHHHHTTCSEEEEE
T ss_pred cCCCCcCCchHHHHHHHHHHee-----CCCCCcCCHHHHHHHHHHCCCCeeeEE
Confidence 3221 111111111111111 011245689999999999999986654
No 79
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.11 E-value=1.7e-10 Score=96.00 Aligned_cols=108 Identities=10% Similarity=0.129 Sum_probs=79.1
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCCCCCCCccceeeecccccccCCh--hHHHHHHHhhhcCCcEEEEEecCC
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNL--PGCFQQVLKCLRQDGVFLASIFGG 78 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~--~~~l~~i~r~LkpGG~l~~~~~~~ 78 (245)
+|+|+.|++.|++++.. ..++++.++|+.++++ +++||+|+|+.+++|++++ ..++++++++|||||++++.....
T Consensus 148 vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~-~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 226 (286)
T 3m70_A 148 WDHNENSIAFLNETKEKENLNISTALYDINAANI-QENYDFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVAAMS 226 (286)
T ss_dssp EESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCC-CSCEEEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEEEBC
T ss_pred EECCHHHHHHHHHHHHHcCCceEEEEeccccccc-cCCccEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEEecC
Confidence 79999999999886542 2379999999999887 6899999999999999654 489999999999999977664322
Q ss_pred CcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 79 ETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
... . ..........+..++.+++. +|+++...
T Consensus 227 ~~~--------------~-~~~~~~~~~~~~~~l~~~~~--~~~~~~~~ 258 (286)
T 3m70_A 227 TDD--------------V-PCPLPFSFTFAENELKEYYK--DWEFLEYN 258 (286)
T ss_dssp CSS--------------S-CCSSCCSCCBCTTHHHHHTT--TSEEEEEE
T ss_pred CCC--------------C-CCCCCccccCCHHHHHHHhc--CCEEEEEE
Confidence 110 0 00111122456778888875 48876554
No 80
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.10 E-value=2.2e-10 Score=99.02 Aligned_cols=117 Identities=12% Similarity=0.034 Sum_probs=81.2
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeecccccccCChh--HHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLP--GCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~--~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+ +.|++.|+++... ..+++|+++|+.+ +++ ..||+|+++.++|++++.. .++++++++|||||++++..+
T Consensus 212 ~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 212 VEL-AGPAERARRRFADAGLADRVTVAEGDFFK-PLP-VTADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTS-CCS-CCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred EeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-cCC-CCCCEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 688 9999999875421 2379999999975 444 3499999999999998775 899999999999999888765
Q ss_pred --C-CCc-HHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 77 --G-GET-LYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 77 --~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
. +.. .......+........ .....+.++|.++|+++||+++.+.
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ll~~aGf~~~~~~ 337 (374)
T 1qzz_A 289 ADVEGDGADRFFSTLLDLRMLTFM------GGRVRTRDEVVDLAGSAGLALASER 337 (374)
T ss_dssp CH-------HHHHHHHHHHHHHHH------SCCCCCHHHHHHHHHTTTEEEEEEE
T ss_pred hhhcCCCCCcchhhhcchHHHHhC------CCcCCCHHHHHHHHHHCCCceEEEE
Confidence 2 211 1111111111111111 1235689999999999999987655
No 81
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.09 E-value=4.8e-11 Score=94.64 Aligned_cols=77 Identities=14% Similarity=0.183 Sum_probs=67.7
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccC---------------ChhHHHHHHHhhhc
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVN---------------NLPGCFQQVLKCLR 66 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~---------------d~~~~l~~i~r~Lk 66 (245)
+|+|+.|++.|+++....+++.+.++|+.++++++++||+|+++.+++++. ++..++++++++||
T Consensus 71 ~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 150 (215)
T 2pxx_A 71 VDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLV 150 (215)
T ss_dssp EESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEE
T ss_pred EeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCc
Confidence 799999999999877644689999999999998888999999999887764 56799999999999
Q ss_pred CCcEEEEEecCC
Q psy16312 67 QDGVFLASIFGG 78 (245)
Q Consensus 67 pGG~l~~~~~~~ 78 (245)
|||++++.+++.
T Consensus 151 pgG~li~~~~~~ 162 (215)
T 2pxx_A 151 PGGRFISMTSAA 162 (215)
T ss_dssp EEEEEEEEESCC
T ss_pred CCCEEEEEeCCC
Confidence 999999987654
No 82
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.08 E-value=3.4e-10 Score=97.91 Aligned_cols=113 Identities=17% Similarity=0.108 Sum_probs=80.5
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChh--HHHHHHHhhhcCCcEEEEEecC-C
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLP--GCFQQVLKCLRQDGVFLASIFG-G 78 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~--~~l~~i~r~LkpGG~l~~~~~~-~ 78 (245)
+|+ +.|++.|++. ++++|+++|+.+ +++. ||+|++..+||+++|+. .+|++++++|||||++++..+. +
T Consensus 239 ~D~-~~~~~~a~~~----~~v~~~~~d~~~-~~~~--~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 310 (372)
T 1fp1_D 239 FDL-PQVIENAPPL----SGIEHVGGDMFA-SVPQ--GDAMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILP 310 (372)
T ss_dssp EEC-HHHHTTCCCC----TTEEEEECCTTT-CCCC--EEEEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred eCh-HHHHHhhhhc----CCCEEEeCCccc-CCCC--CCEEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccC
Confidence 588 8999998863 469999999987 6653 99999999999999888 9999999999999998876421 1
Q ss_pred -C---cHHH-HHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 79 -E---TLYE-LRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 79 -~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
. +..+ ....+....+...+ ....+..+|.++|+++||+++.+..
T Consensus 311 ~~~~~~~~~~~~~~~d~~~~~~~~------~~~~t~~e~~~ll~~aGf~~~~~~~ 359 (372)
T 1fp1_D 311 EEPNTSEESKLVSTLDNLMFITVG------GRERTEKQYEKLSKLSGFSKFQVAC 359 (372)
T ss_dssp SSCCSSHHHHHHHHHHHHHHHHHS------CCCEEHHHHHHHHHHTTCSEEEEEE
T ss_pred CCCccchHHHHHHHhhHHHHhccC------CccCCHHHHHHHHHHCCCceEEEEE
Confidence 1 1111 11111111110111 1235789999999999999876543
No 83
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.08 E-value=2.5e-09 Score=92.36 Aligned_cols=114 Identities=10% Similarity=0.027 Sum_probs=79.5
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChh--HHHHHHHhhhcCCcEEEEEecC-C
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLP--GCFQQVLKCLRQDGVFLASIFG-G 78 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~--~~l~~i~r~LkpGG~l~~~~~~-~ 78 (245)
+|+ +.|++.|++. ++++|+.+|+.+ +++.+ |+|++..+||++++.. .+|++++++|||||++++..+. +
T Consensus 233 ~D~-~~~~~~a~~~----~~v~~~~~d~~~-~~p~~--D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 233 FDL-PHVIQDAPAF----SGVEHLGGDMFD-GVPKG--DAIFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp EEC-HHHHTTCCCC----TTEEEEECCTTT-CCCCC--SEEEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred Eeh-HHHHHhhhhc----CCCEEEecCCCC-CCCCC--CEEEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 588 8899988764 479999999987 66644 9999999999997755 7899999999999998876532 1
Q ss_pred Cc-----HHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 79 ET-----LYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 79 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
.. .......+....+.. .......+.++|.++|+++||+.+.+..
T Consensus 305 ~~~~~~~~~~~~~~~d~~~~~~-----~~~g~~rt~~e~~~ll~~AGF~~v~~~~ 354 (368)
T 3reo_A 305 PSPDPSIATKVVIHTDALMLAY-----NPGGKERTEKEFQALAMASGFRGFKVAS 354 (368)
T ss_dssp SSCCCCHHHHHHHHHHHHHHHH-----SSBCCCCCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCCchhhhHHHhhhHHHHhh-----cCCCccCCHHHHHHHHHHCCCeeeEEEE
Confidence 11 111111111111110 0112345789999999999999876553
No 84
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.07 E-value=4e-10 Score=97.43 Aligned_cols=116 Identities=12% Similarity=0.017 Sum_probs=82.8
Q ss_pred CcChHHHHHhhCCCCC---CCCceeEEEcCCCCCCCCCCccceeeecccccccCChh--HHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPED---TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLP--GCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~---~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~--~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+ +.|++.|+++.. ...+++|+.+|+. .+++. .||+|++..++|+++|.. .+|++++++|+|||++++..+
T Consensus 232 ~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~-~~~p~-~~D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~ 308 (369)
T 3gwz_A 232 LER-PPVAEEARELLTGRGLADRCEILPGDFF-ETIPD-GADVYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDN 308 (369)
T ss_dssp EEC-HHHHHHHHHHHHHTTCTTTEEEEECCTT-TCCCS-SCSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred EcC-HHHHHHHHHhhhhcCcCCceEEeccCCC-CCCCC-CceEEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 688 999999987542 1257999999998 55554 899999999999998876 799999999999999887643
Q ss_pred C-CC-cHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 77 G-GE-TLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 77 ~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
. +. .... ...+....+... .....+.++|.++|+++||+++.+.
T Consensus 309 ~~~~~~~~~-~~~~d~~~~~~~------~g~~~t~~e~~~ll~~aGf~~~~~~ 354 (369)
T 3gwz_A 309 LIDERPAAS-TLFVDLLLLVLV------GGAERSESEFAALLEKSGLRVERSL 354 (369)
T ss_dssp BCCSSCCHH-HHHHHHHHHHHH------SCCCBCHHHHHHHHHTTTEEEEEEE
T ss_pred ccCCCCCCc-hhHhhHHHHhhc------CCccCCHHHHHHHHHHCCCeEEEEE
Confidence 2 21 1111 111111111111 1234678999999999999987664
No 85
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.07 E-value=2.6e-09 Score=92.17 Aligned_cols=113 Identities=13% Similarity=0.018 Sum_probs=79.1
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCCh--hHHHHHHHhhhcCCcEEEEEecC-C
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNL--PGCFQQVLKCLRQDGVFLASIFG-G 78 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~--~~~l~~i~r~LkpGG~l~~~~~~-~ 78 (245)
+|+ +.|++.|++. ++++|+.+|+.+ |++.+ |+|++..+||++++. ..+|++++++|||||++++..+. +
T Consensus 231 ~D~-~~~~~~a~~~----~~v~~~~~D~~~-~~p~~--D~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~ 302 (364)
T 3p9c_A 231 FDL-PHVISEAPQF----PGVTHVGGDMFK-EVPSG--DTILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILP 302 (364)
T ss_dssp EEC-HHHHTTCCCC----TTEEEEECCTTT-CCCCC--SEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBC
T ss_pred ecC-HHHHHhhhhc----CCeEEEeCCcCC-CCCCC--CEEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 588 8899988764 479999999987 77644 999999999988664 47899999999999998876532 1
Q ss_pred C----c-HHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 79 E----T-LYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 79 ~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
. . .......+....+.. .......+.++|.++|+++||+.+.+.
T Consensus 303 ~~~~~~~~~~~~~~~d~~m~~~-----~~~g~~rt~~e~~~ll~~AGF~~v~~~ 351 (364)
T 3p9c_A 303 VNPEANPSSQGVFHVDMIMLAH-----NPGGRERYEREFQALARGAGFTGVKST 351 (364)
T ss_dssp SSCCSSHHHHHHHHHHHHHHHH-----CSSCCCCBHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCcchhhhhHHHhHHHHHhc-----ccCCccCCHHHHHHHHHHCCCceEEEE
Confidence 1 1 111111111111100 011234578999999999999987655
No 86
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.07 E-value=1.9e-10 Score=91.63 Aligned_cols=79 Identities=19% Similarity=0.347 Sum_probs=67.5
Q ss_pred ceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCCcHHHHHHHHHHHHHHhcCCCC
Q psy16312 21 IYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGETLYELRSAVHLAEMERRGGVA 100 (245)
Q Consensus 21 ~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (245)
++.+.++|++++++++++||+|+|..++|| .++..++++++++|+|||++++..+..
T Consensus 98 ~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~-~~~~~~l~~~~~~L~~gG~l~i~~~~~---------------------- 154 (215)
T 2zfu_A 98 DPRVTVCDMAQVPLEDESVDVAVFCLSLMG-TNIRDFLEEANRVLKPGGLLKVAEVSS---------------------- 154 (215)
T ss_dssp STTEEESCTTSCSCCTTCEEEEEEESCCCS-SCHHHHHHHHHHHEEEEEEEEEEECGG----------------------
T ss_pred CceEEEeccccCCCCCCCEeEEEEehhccc-cCHHHHHHHHHHhCCCCeEEEEEEcCC----------------------
Confidence 578899999999988899999999999986 799999999999999999999885321
Q ss_pred CcccCCCCHHHHHHHHHhCCCeeeEE
Q psy16312 101 SHISPFTQIRDVGSLLTRAGFNMLTI 126 (245)
Q Consensus 101 ~~~~~~~~~~~~~~~l~~aGF~~~~~ 126 (245)
.+.+..++.++|+++||+++..
T Consensus 155 ----~~~~~~~~~~~l~~~Gf~~~~~ 176 (215)
T 2zfu_A 155 ----RFEDVRTFLRAVTKLGFKIVSK 176 (215)
T ss_dssp ----GCSCHHHHHHHHHHTTEEEEEE
T ss_pred ----CCCCHHHHHHHHHHCCCEEEEE
Confidence 1226788999999999997653
No 87
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.04 E-value=4.5e-10 Score=95.57 Aligned_cols=117 Identities=13% Similarity=0.037 Sum_probs=82.5
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeecccccccCChh--HHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLP--GCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~--~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+ +.|++.|+++... ..+++|+.+|+.+ +++ ++||+|++..++|++++.. .++++++++|+|||++++...
T Consensus 197 ~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 273 (334)
T 2ip2_A 197 LDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVP-SNGDIYLLSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIER 273 (334)
T ss_dssp EEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCC-SSCSEEEEESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEEC
T ss_pred eCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCC-CCCCEEEEchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 688 8999999876532 2479999999987 555 6899999999999887766 899999999999999988753
Q ss_pred CC-Cc-HHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 77 GG-ET-LYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 77 ~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
.. .. .......+........+ ....+.++|.++|+++||+++.+.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~t~~e~~~ll~~aGf~~~~~~ 320 (334)
T 2ip2_A 274 TISASEPSPMSVLWDVHLFMACA------GRHRTTEEVVDLLGRGGFAVERIV 320 (334)
T ss_dssp CBCSSSCCHHHHHHHHHHHHHHS------CCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred ccCCCCCcchhHHhhhHhHhhCC------CcCCCHHHHHHHHHHCCCceeEEE
Confidence 21 11 01111111111111111 123478999999999999986654
No 88
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.04 E-value=1.9e-09 Score=92.39 Aligned_cols=116 Identities=11% Similarity=0.047 Sum_probs=75.9
Q ss_pred CcChHHHHHhhCCCC-CCCCceeEEEcCCCCCCCCCCccceeeecccccccCCh--hHHHHHHHhhhcCCcEEEEEecCC
Q psy16312 2 CDNCESILSQAEPPE-DTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNL--PGCFQQVLKCLRQDGVFLASIFGG 78 (245)
Q Consensus 2 iD~S~~ml~~A~~~~-~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~--~~~l~~i~r~LkpGG~l~~~~~~~ 78 (245)
+|++ .++..++.+. ....+++|+.+|+. .+++ +||+|++..++|+++|. ..+|++++++|||||++++..+..
T Consensus 214 ~D~~-~~~~~~~~~~~~~~~~v~~~~~d~~-~~~p--~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~ 289 (348)
T 3lst_A 214 LDRA-EVVARHRLDAPDVAGRWKVVEGDFL-REVP--HADVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVV 289 (348)
T ss_dssp EECH-HHHTTCCCCCGGGTTSEEEEECCTT-TCCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCB
T ss_pred ecCH-HHhhcccccccCCCCCeEEEecCCC-CCCC--CCcEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEecc
Confidence 5774 4444222221 12357999999996 3443 89999999999999888 599999999999999998865321
Q ss_pred -Cc-HHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 79 -ET-LYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 79 -~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
.. .......+....+.. ......+.++|.++|+++||+++.+.
T Consensus 290 ~~~~~~~~~~~~d~~~~~~------~~~~~~t~~e~~~ll~~aGf~~~~~~ 334 (348)
T 3lst_A 290 PEGNDAHQSKEMDFMMLAA------RTGQERTAAELEPLFTAAGLRLDRVV 334 (348)
T ss_dssp CSSSSCCHHHHHHHHHHHT------TSCCCCBHHHHHHHHHHTTEEEEEEE
T ss_pred CCCCCcchhhhcChhhhhc------CCCcCCCHHHHHHHHHHCCCceEEEE
Confidence 11 000111111111111 11235678999999999999987665
No 89
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.03 E-value=4.4e-10 Score=96.36 Aligned_cols=117 Identities=12% Similarity=0.068 Sum_probs=81.4
Q ss_pred CcChHHHHHhhCCCCC---CCCceeEEEcCCCCCC--CCCCccceeeecccccccCCh--hHHHHHHHhhhcCCcEEEEE
Q psy16312 2 CDNCESILSQAEPPED---TEVIYEKKFVDEEHLP--FAENSVDLLISNLALHWVNNL--PGCFQQVLKCLRQDGVFLAS 74 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~---~~~~i~f~~~D~~~l~--~~~~~FD~Vis~~~l~~~~d~--~~~l~~i~r~LkpGG~l~~~ 74 (245)
+|+ +.|++.|+++.. ...+++|+.+|+.+.+ ++ +.||+|++..++|++++. ..+|++++++|+|||++++.
T Consensus 209 ~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~~~D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~ 286 (352)
T 3mcz_A 209 WDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEG-GAADVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLIL 286 (352)
T ss_dssp EEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTT-CCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCC-CCccEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEE
Confidence 588 779988887532 1246999999999876 44 679999999999999876 78999999999999998876
Q ss_pred ecC-CCc--HHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeE
Q psy16312 75 IFG-GET--LYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLT 125 (245)
Q Consensus 75 ~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~ 125 (245)
.+. +.. .......+....+... .....++.++|.++|+++||+++.
T Consensus 287 e~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~t~~e~~~ll~~aGf~~~~ 335 (352)
T 3mcz_A 287 TMTMNDDRVTPALSADFSLHMMVNT-----NHGELHPTPWIAGVVRDAGLAVGE 335 (352)
T ss_dssp EECCCTTSSSSHHHHHHHHHHHHHS-----TTCCCCCHHHHHHHHHHTTCEEEE
T ss_pred EeccCCCCCCCchHHHhhHHHHhhC-----CCCCcCCHHHHHHHHHHCCCceee
Confidence 432 111 1111111111111110 012245789999999999999876
No 90
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.02 E-value=9.8e-10 Score=94.30 Aligned_cols=111 Identities=11% Similarity=0.068 Sum_probs=79.9
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChh--HHHHHHHhhhcC---CcEEEEEec
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLP--GCFQQVLKCLRQ---DGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~--~~l~~i~r~Lkp---GG~l~~~~~ 76 (245)
+|+ +.|++.|++. ++++|+++|+.+ +++ .||+|++..+||+++|+. .+|++++++||| ||++++..+
T Consensus 218 ~D~-~~~~~~a~~~----~~v~~~~~d~~~-~~p--~~D~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 289 (352)
T 1fp2_A 218 FDR-PQVVENLSGS----NNLTYVGGDMFT-SIP--NADAVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDM 289 (352)
T ss_dssp EEC-HHHHTTCCCB----TTEEEEECCTTT-CCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEEC
T ss_pred eeC-HHHHhhcccC----CCcEEEeccccC-CCC--CccEEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 688 9999999863 369999999976 555 399999999999998888 999999999999 999887653
Q ss_pred C-CC--cH---HHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 77 G-GE--TL---YELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 77 ~-~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
. +. .. ......+... +. . ......+.++|.++|+++||+.+.+.
T Consensus 290 ~~~~~~~~~~~~~~~~~~d~~-~~--~----~~g~~~t~~e~~~ll~~aGf~~~~~~ 339 (352)
T 1fp2_A 290 VIDKKKDENQVTQIKLLMDVN-MA--C----LNGKERNEEEWKKLFIEAGFQHYKIS 339 (352)
T ss_dssp EECTTTSCHHHHHHHHHHHHH-GG--G----GTCCCEEHHHHHHHHHHTTCCEEEEE
T ss_pred ecCCCCCccchhhhHhhccHH-HH--h----ccCCCCCHHHHHHHHHHCCCCeeEEE
Confidence 2 11 11 1111111111 00 0 01234578999999999999987654
No 91
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.00 E-value=6.9e-11 Score=95.73 Aligned_cols=73 Identities=8% Similarity=0.004 Sum_probs=59.7
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCC--CCCCCccceeee-cccccccC-----ChhHHHHHHHhhhcCCcEEE
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHL--PFAENSVDLLIS-NLALHWVN-----NLPGCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l--~~~~~~FD~Vis-~~~l~~~~-----d~~~~l~~i~r~LkpGG~l~ 72 (245)
+|+|+.|++.|+++... ..++.++++|++++ ++++++||+|++ .+++ ... ++..++++++++|||||+|+
T Consensus 89 vD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~~-~~~~~~~~~~~~~l~~~~r~LkpgG~l~ 167 (236)
T 1zx0_A 89 IECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPL-SEETWHTHQFNFIKNHAFRLLKPGGVLT 167 (236)
T ss_dssp EECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCC-BGGGTTTHHHHHHHHTHHHHEEEEEEEE
T ss_pred EcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCccc-chhhhhhhhHHHHHHHHHHhcCCCeEEE
Confidence 79999999999986542 36799999999988 888899999999 5554 332 23467999999999999998
Q ss_pred EEe
Q psy16312 73 ASI 75 (245)
Q Consensus 73 ~~~ 75 (245)
+..
T Consensus 168 ~~~ 170 (236)
T 1zx0_A 168 YCN 170 (236)
T ss_dssp ECC
T ss_pred EEe
Confidence 764
No 92
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.00 E-value=3.4e-11 Score=100.48 Aligned_cols=76 Identities=12% Similarity=0.087 Sum_probs=66.0
Q ss_pred CcChHHHHHhhCCCC----C--CCCceeEEEcCCCCCC---CCCCccceeeec-ccccccCC-------hhHHHHHHHhh
Q psy16312 2 CDNCESILSQAEPPE----D--TEVIYEKKFVDEEHLP---FAENSVDLLISN-LALHWVNN-------LPGCFQQVLKC 64 (245)
Q Consensus 2 iD~S~~ml~~A~~~~----~--~~~~i~f~~~D~~~l~---~~~~~FD~Vis~-~~l~~~~d-------~~~~l~~i~r~ 64 (245)
+|+|+.|++.|+++. . ...++.+.++|+..++ +.+++||+|+|+ .+++|+++ +..++++++++
T Consensus 85 vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~ 164 (293)
T 3thr_A 85 VDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASM 164 (293)
T ss_dssp EESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHT
T ss_pred EECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHH
Confidence 799999999997643 1 1246889999999887 778999999998 89999999 99999999999
Q ss_pred hcCCcEEEEEecC
Q psy16312 65 LRQDGVFLASIFG 77 (245)
Q Consensus 65 LkpGG~l~~~~~~ 77 (245)
|||||+++++++.
T Consensus 165 LkpgG~l~~~~~~ 177 (293)
T 3thr_A 165 VRPGGLLVIDHRN 177 (293)
T ss_dssp EEEEEEEEEEEEC
T ss_pred cCCCeEEEEEeCC
Confidence 9999999998754
No 93
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.00 E-value=6.5e-10 Score=95.63 Aligned_cols=121 Identities=12% Similarity=0.069 Sum_probs=83.9
Q ss_pred CcChHHHHHhhCCCCC---CCCceeEEEcCCCCCCCCCCccceeeecccccccCC--hhHHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPED---TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNN--LPGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~---~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d--~~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+ +.|++.|+++.. ...+++|+.+|+.+.++++ +|+|++..++|+++| ...+|++++++|||||++++..+
T Consensus 220 ~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~--~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~ 296 (359)
T 1x19_A 220 LNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYPE--ADAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDM 296 (359)
T ss_dssp EEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCCC--CSEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEE
T ss_pred Eec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCCC--CCEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEec
Confidence 689 999999987532 1235999999999888763 399999999999987 77899999999999999976653
Q ss_pred CC-Cc-HHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 77 GG-ET-LYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 77 ~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
.. .. .......+.. +...+. ......+.+.++|.++|+++||+++.+..
T Consensus 297 ~~~~~~~~~~~~~~~~--~~~~~~-g~~~~~~~t~~e~~~ll~~aGf~~v~~~~ 347 (359)
T 1x19_A 297 VIDDPENPNFDYLSHY--ILGAGM-PFSVLGFKEQARYKEILESLGYKDVTMVR 347 (359)
T ss_dssp CCCCTTSCCHHHHHHH--GGGGGS-SCCCCCCCCGGGHHHHHHHHTCEEEEEEE
T ss_pred ccCCCCCchHHHHHHH--HHhcCC-CCcccCCCCHHHHHHHHHHCCCceEEEEe
Confidence 22 11 0111111111 111110 11223457899999999999999876553
No 94
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.99 E-value=5.5e-11 Score=96.57 Aligned_cols=73 Identities=7% Similarity=-0.002 Sum_probs=60.9
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCC--CCCCCccceee-----ecccccccCChhHHHHHHHhhhcCCcEEEE
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHL--PFAENSVDLLI-----SNLALHWVNNLPGCFQQVLKCLRQDGVFLA 73 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l--~~~~~~FD~Vi-----s~~~l~~~~d~~~~l~~i~r~LkpGG~l~~ 73 (245)
||+|+.|++.|+++... ..++.++.+|++.+ ++++++||.|+ +...++++.++..++++++|+|||||+|++
T Consensus 89 id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 89 IECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp EECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred EeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEE
Confidence 79999999999986542 45788999998764 46778899886 466777888999999999999999999987
Q ss_pred E
Q psy16312 74 S 74 (245)
Q Consensus 74 ~ 74 (245)
.
T Consensus 169 ~ 169 (236)
T 3orh_A 169 C 169 (236)
T ss_dssp C
T ss_pred E
Confidence 5
No 95
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.98 E-value=1.3e-10 Score=93.01 Aligned_cols=76 Identities=21% Similarity=0.246 Sum_probs=65.3
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCCCCCCCccceeeeccc--ccccCChhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHLPFAENSVDLLISNLA--LHWVNNLPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~--l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+|+|+.|++.|+++... ..+++++++|+.++++++++||+|+|+.+ +++..++..++++++++|||||++++..+.
T Consensus 66 vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 66 VDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp EESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 79999999999886531 25799999999999888889999999999 666667889999999999999999888643
No 96
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.98 E-value=2.9e-10 Score=94.33 Aligned_cols=73 Identities=14% Similarity=0.201 Sum_probs=61.7
Q ss_pred CcChHHHHHhhCCCC---------------------C---CC---------CceeEEEcCCCCCCCC-CCccceeeeccc
Q psy16312 2 CDNCESILSQAEPPE---------------------D---TE---------VIYEKKFVDEEHLPFA-ENSVDLLISNLA 47 (245)
Q Consensus 2 iD~S~~ml~~A~~~~---------------------~---~~---------~~i~f~~~D~~~l~~~-~~~FD~Vis~~~ 47 (245)
+|+|+.||+.|++.. . .+ .+|.|.++|+.+.|++ .++||+|+|..+
T Consensus 143 tDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnv 222 (274)
T 1af7_A 143 SDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEGLVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNV 222 (274)
T ss_dssp EESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCSEEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSS
T ss_pred EECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCCceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCc
Confidence 799999999998763 0 00 2589999999987664 578999999999
Q ss_pred ccccCCh--hHHHHHHHhhhcCCcEEEEE
Q psy16312 48 LHWVNNL--PGCFQQVLKCLRQDGVFLAS 74 (245)
Q Consensus 48 l~~~~d~--~~~l~~i~r~LkpGG~l~~~ 74 (245)
++|+++. .+++++++++|+|||+|++.
T Consensus 223 liyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 223 MIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp GGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred hHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 9999765 68999999999999999885
No 97
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.98 E-value=8.1e-10 Score=94.95 Aligned_cols=118 Identities=13% Similarity=0.049 Sum_probs=81.6
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeecccccccCChh--HHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLP--GCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~--~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+ +.|++.|+++... ..+++|+++|+.+ +++ ..||+|++..++|++++.. .++++++++|+|||++++..+
T Consensus 213 ~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~-~~~D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 289 (360)
T 1tw3_A 213 LEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFE-PLP-RKADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER 289 (360)
T ss_dssp EEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTS-CCS-SCEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred ecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCC-CCC-CCccEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEE
Confidence 577 8999999875421 2379999999975 344 3499999999999998774 899999999999999988754
Q ss_pred C--CCc-HHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 77 G--GET-LYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 77 ~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
. +.. .......+....+... .....+.++|.++|+++||+++.+..
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~t~~e~~~ll~~aGf~~~~~~~ 338 (360)
T 1tw3_A 290 DDLHENSFNEQFTELDLRMLVFL------GGALRTREKWDGLAASAGLVVEEVRQ 338 (360)
T ss_dssp CBCGGGCCSHHHHHHHHHHHHHH------SCCCCBHHHHHHHHHHTTEEEEEEEE
T ss_pred eccCCCCCcchhhhccHHHhhhc------CCcCCCHHHHHHHHHHCCCeEEEEEe
Confidence 4 211 0011111111111111 12356899999999999999876553
No 98
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=98.97 E-value=2.3e-09 Score=92.57 Aligned_cols=108 Identities=17% Similarity=0.163 Sum_probs=75.1
Q ss_pred eeEEEcCCCC---CCCCCCccceeeecccccccCChhHH---------------------------------------HH
Q psy16312 22 YEKKFVDEEH---LPFAENSVDLLISNLALHWVNNLPGC---------------------------------------FQ 59 (245)
Q Consensus 22 i~f~~~D~~~---l~~~~~~FD~Vis~~~l~~~~d~~~~---------------------------------------l~ 59 (245)
-.|+.+...+ -.|++++||+|+|+++|||+.+.... |+
T Consensus 130 ~~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~ 209 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLR 209 (384)
T ss_dssp SEEEEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3567776665 35788999999999999999765322 55
Q ss_pred HHHhhhcCCcEEEEEecCCCcH--H-----HHHHHHHHHHHHhcCCC-------CCcccCCCCHHHHHHHHHhC-CCeee
Q psy16312 60 QVLKCLRQDGVFLASIFGGETL--Y-----ELRSAVHLAEMERRGGV-------ASHISPFTQIRDVGSLLTRA-GFNML 124 (245)
Q Consensus 60 ~i~r~LkpGG~l~~~~~~~~~~--~-----~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~~a-GF~~~ 124 (245)
..++.|+|||++++++.+..+. . .+..+|.... ..|.. ...+..+++.+++..++++. +|.+.
T Consensus 210 ~Ra~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv--~eGli~~ek~dsf~~P~y~ps~~E~~~~le~~g~F~i~ 287 (384)
T 2efj_A 210 IHSEELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLV--IEGHLEEEKLDSFNVPIYAPSTEEVKRIVEEEGSFEIL 287 (384)
T ss_dssp HHHHHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHH--HHTSSCHHHHHTCCCSBCCCCHHHHHHHHHHHCSEEEE
T ss_pred HHHHHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHH--HhCCcchhhhcccCCcccCCCHHHHHHHHHHcCCceEE
Confidence 5589999999999998877654 2 4555554221 11111 12234468999999999987 58888
Q ss_pred EEEEEeE
Q psy16312 125 TIDVDEI 131 (245)
Q Consensus 125 ~~~~~~~ 131 (245)
.++....
T Consensus 288 ~le~~~~ 294 (384)
T 2efj_A 288 YLETFNA 294 (384)
T ss_dssp EEEEEEE
T ss_pred EEEEEee
Confidence 7776543
No 99
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.95 E-value=2.6e-10 Score=91.08 Aligned_cols=115 Identities=14% Similarity=0.069 Sum_probs=74.4
Q ss_pred CcChHHHHHh----hCCCC--CCCCceeEEEcCCCCCCCCCCccceee---ecccc--cccCChhHHHHHHHhhhcCCcE
Q psy16312 2 CDNCESILSQ----AEPPE--DTEVIYEKKFVDEEHLPFAENSVDLLI---SNLAL--HWVNNLPGCFQQVLKCLRQDGV 70 (245)
Q Consensus 2 iD~S~~ml~~----A~~~~--~~~~~i~f~~~D~~~l~~~~~~FD~Vi---s~~~l--~~~~d~~~~l~~i~r~LkpGG~ 70 (245)
+|+|+.|++. |+++. ...++++|+++|++++|+.+++ |.|+ +...+ ||++|+..++++++++|||||+
T Consensus 57 vD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~ 135 (218)
T 3mq2_A 57 LDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGAS 135 (218)
T ss_dssp EESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEE
T ss_pred EECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcE
Confidence 7999999886 34432 2235899999999999987666 6665 33344 3888999999999999999999
Q ss_pred EEEEecCCCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 71 FLASIFGGETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 71 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
++++.......... ..... .+...+....+.+..++.++||++..+.
T Consensus 136 l~~~~~~~~~~~~~---------~~~~~-~~~~~~~~~~~~l~~~l~~aGf~i~~~~ 182 (218)
T 3mq2_A 136 FLVALNLHAWRPSV---------PEVGE-HPEPTPDSADEWLAPRYAEAGWKLADCR 182 (218)
T ss_dssp EEEEEEGGGBTTBC---------GGGTT-CCCCCHHHHHHHHHHHHHHTTEEEEEEE
T ss_pred EEEEeccccccccc---------ccccc-CCccchHHHHHHHHHHHHHcCCCceeee
Confidence 99875321110000 00000 0111111123457789999999986554
No 100
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.95 E-value=4.6e-09 Score=90.29 Aligned_cols=112 Identities=15% Similarity=0.114 Sum_probs=80.1
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChh--HHHHHHHhhhcC---CcEEEEEec
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLP--GCFQQVLKCLRQ---DGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~--~~l~~i~r~Lkp---GG~l~~~~~ 76 (245)
+|+ +.|++.|++. ++++|+.+|+.+ +++ .||+|+++.+||+++|+. .+|++++++|+| ||++++..+
T Consensus 223 ~D~-~~~~~~a~~~----~~v~~~~~d~~~-~~~--~~D~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~ 294 (358)
T 1zg3_A 223 FDQ-PQVVGNLTGN----ENLNFVGGDMFK-SIP--SADAVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDI 294 (358)
T ss_dssp EEC-HHHHSSCCCC----SSEEEEECCTTT-CCC--CCSEEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEEC
T ss_pred ecc-HHHHhhcccC----CCcEEEeCccCC-CCC--CceEEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEe
Confidence 588 6899888763 469999999987 665 499999999999999877 999999999999 999887643
Q ss_pred C-C--CcH---HHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 77 G-G--ETL---YELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 77 ~-~--~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
. + ... ......+....+... .....+..+|.++|+++||+++.+.
T Consensus 295 ~~~~~~~~~~~~~~~~~~d~~~~~~~------~g~~~t~~e~~~ll~~aGf~~~~~~ 345 (358)
T 1zg3_A 295 SIDETSDDRGLTELQLDYDLVMLTMF------LGKERTKQEWEKLIYDAGFSSYKIT 345 (358)
T ss_dssp EECTTCSCHHHHHHHHHHHHHHHHHH------SCCCEEHHHHHHHHHHTTCCEEEEE
T ss_pred ccCCCCccchhhhHHHhhCHHHhccC------CCCCCCHHHHHHHHHHcCCCeeEEE
Confidence 2 1 111 111111111111111 1234588999999999999987654
No 101
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.95 E-value=4.7e-10 Score=92.14 Aligned_cols=73 Identities=21% Similarity=0.321 Sum_probs=63.1
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecc-cccccCChhHHHHHHHhhhcCCcEEEEEecCC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNL-ALHWVNNLPGCFQQVLKCLRQDGVFLASIFGG 78 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~-~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~ 78 (245)
+|+|+.|++.|+++... .+.++|++++++++++||+|++.. .+|+.+++..++++++++|||||++++++++.
T Consensus 82 vD~s~~~l~~a~~~~~~----~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 155 (260)
T 2avn_A 82 VDPSKEMLEVAREKGVK----NVVEAKAEDLPFPSGAFEAVLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATVDNF 155 (260)
T ss_dssp EESCHHHHHHHHHHTCS----CEEECCTTSCCSCTTCEEEEEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEEEBH
T ss_pred EeCCHHHHHHHHhhcCC----CEEECcHHHCCCCCCCEEEEEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEeCCh
Confidence 79999999999887652 289999999999889999999987 45566899999999999999999999987543
No 102
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.93 E-value=1.9e-09 Score=86.83 Aligned_cols=119 Identities=13% Similarity=0.106 Sum_probs=70.4
Q ss_pred CcCh-HHHHHhh---CCCCC--CCCceeEEEcCCCCCCCC-CCccceeeecccc-----cccCChhHHHHHHHhhhcCCc
Q psy16312 2 CDNC-ESILSQA---EPPED--TEVIYEKKFVDEEHLPFA-ENSVDLLISNLAL-----HWVNNLPGCFQQVLKCLRQDG 69 (245)
Q Consensus 2 iD~S-~~ml~~A---~~~~~--~~~~i~f~~~D~~~l~~~-~~~FD~Vis~~~l-----~~~~d~~~~l~~i~r~LkpGG 69 (245)
+|+| +.|++.| +++.. +.+++.|+++|++.+|.. .+.+|.|++++.+ ++..++..++++++++|||||
T Consensus 54 vD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG 133 (225)
T 3p2e_A 54 IDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEA 133 (225)
T ss_dssp ECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEE
T ss_pred EeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCc
Confidence 7999 7888777 77653 235799999999999742 2455555555432 223455678999999999999
Q ss_pred EEEEEecCCCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 70 VFLASIFGGETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 70 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
++++.+.............. ........+....++..+++++||++.....
T Consensus 134 ~l~i~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~el~~~l~~aGf~v~~~~~ 184 (225)
T 3p2e_A 134 HFEFVTTYSDSYEEAEIKKR--------GLPLLSKAYFLSEQYKAELSNSGFRIDDVKE 184 (225)
T ss_dssp EEEEEECCCC----------------------CCHHHHHSHHHHHHHHHHTCEEEEEEE
T ss_pred EEEEEEeccccchhchhhhc--------CCCCCChhhcchHHHHHHHHHcCCCeeeeee
Confidence 99884322222111100000 0000000111223488999999999865553
No 103
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.91 E-value=6.8e-09 Score=89.19 Aligned_cols=116 Identities=16% Similarity=0.059 Sum_probs=79.6
Q ss_pred cChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCCCccceeeecccccccCChh--HHHHHHHhhhcCCcEEEEEecC-
Q psy16312 3 DNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLP--GCFQQVLKCLRQDGVFLASIFG- 77 (245)
Q Consensus 3 D~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~--~~l~~i~r~LkpGG~l~~~~~~- 77 (245)
|+ |.+++.|+++.+ ...+|+|+.+|+...|.+ .+|+|++..+||.++|.. ..|++++++|+|||++++....
T Consensus 210 dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~--~~D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~ 286 (353)
T 4a6d_A 210 DI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP--EADLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLL 286 (353)
T ss_dssp EC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC--CCSEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCC
T ss_pred cC-HHHHHHHHHhhhhcccCceeeecCccccCCCC--CceEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeee
Confidence 44 778888877543 246899999999876654 579999999999998764 6799999999999998876431
Q ss_pred C--CcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 78 G--ETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 78 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
+ ...+.....+....+...+ ..-++.++|.++|+++||+.+.+.
T Consensus 287 ~~~~~~~~~~~~~dl~ml~~~~------g~ert~~e~~~ll~~AGf~~v~v~ 332 (353)
T 4a6d_A 287 DEDRRGPLLTQLYSLNMLVQTE------GQERTPTHYHMLLSSAGFRDFQFK 332 (353)
T ss_dssp CTTSCCCHHHHHHHHHHHHSSS------CCCCCHHHHHHHHHHHTCEEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHhCC------CcCCCHHHHHHHHHHCCCceEEEE
Confidence 1 1111111112111111111 123578999999999999986654
No 104
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.88 E-value=1e-08 Score=78.86 Aligned_cols=90 Identities=13% Similarity=0.101 Sum_probs=72.5
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCCh---------hHHHHHHHhhhcCCcEEE
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNL---------PGCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~---------~~~l~~i~r~LkpGG~l~ 72 (245)
+|+|+.|++. . .+++++++|+.+ ++.+++||+|+|+..++|.++. ...+.++.+.| |||+++
T Consensus 50 vD~s~~~~~~-----~--~~~~~~~~d~~~-~~~~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~ 120 (170)
T 3q87_B 50 TDLNIRALES-----H--RGGNLVRADLLC-SINQESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLY 120 (170)
T ss_dssp EESCHHHHHT-----C--SSSCEEECSTTT-TBCGGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEE
T ss_pred EECCHHHHhc-----c--cCCeEEECChhh-hcccCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEE
Confidence 7999999998 2 478999999987 6666899999999999987765 67899999999 999999
Q ss_pred EEecCCCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 73 ASIFGGETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
+..+... ....+.++++++||..+.+..
T Consensus 121 ~~~~~~~----------------------------~~~~l~~~l~~~gf~~~~~~~ 148 (170)
T 3q87_B 121 LLVIEAN----------------------------RPKEVLARLEERGYGTRILKV 148 (170)
T ss_dssp EEEEGGG----------------------------CHHHHHHHHHHTTCEEEEEEE
T ss_pred EEEecCC----------------------------CHHHHHHHHHHCCCcEEEEEe
Confidence 8763211 245677888899998766553
No 105
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.88 E-value=2.4e-09 Score=85.25 Aligned_cols=74 Identities=20% Similarity=0.214 Sum_probs=62.0
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCC--CCCCccceeeecccccccCC--------hhHHHHHHHhhhcCCc
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLP--FAENSVDLLISNLALHWVNN--------LPGCFQQVLKCLRQDG 69 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~--~~~~~FD~Vis~~~l~~~~d--------~~~~l~~i~r~LkpGG 69 (245)
+|+|+.|++.|++++. +..++.++++|+.+++ +++++||+|++++...|... ...++.+++++|+|||
T Consensus 71 vD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 150 (214)
T 1yzh_A 71 IDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENG 150 (214)
T ss_dssp EESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTC
T ss_pred EEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCc
Confidence 7999999999988653 2257999999999887 77789999999987766542 2579999999999999
Q ss_pred EEEEEe
Q psy16312 70 VFLASI 75 (245)
Q Consensus 70 ~l~~~~ 75 (245)
.+++.+
T Consensus 151 ~l~~~~ 156 (214)
T 1yzh_A 151 EIHFKT 156 (214)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999886
No 106
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=98.83 E-value=2.6e-08 Score=85.33 Aligned_cols=107 Identities=17% Similarity=0.202 Sum_probs=73.0
Q ss_pred eEEEcCCCC---CCCCCCccceeeecccccccCChh---------------------------------HHHHHHHhhhc
Q psy16312 23 EKKFVDEEH---LPFAENSVDLLISNLALHWVNNLP---------------------------------GCFQQVLKCLR 66 (245)
Q Consensus 23 ~f~~~D~~~---l~~~~~~FD~Vis~~~l~~~~d~~---------------------------------~~l~~i~r~Lk 66 (245)
.|..+...+ -.|++++||+|+|+++|||+.+.. .+|+..++.|+
T Consensus 121 ~f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~ 200 (359)
T 1m6e_X 121 CFINGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVV 200 (359)
T ss_dssp EEEEEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBC
T ss_pred EEEEecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 455555554 568889999999999999996532 23888899999
Q ss_pred CCcEEEEEecCCCc-----------HHHHHHHHHHHHHHhcCCCC-------CcccCCCCHHHHHHHHHhCC-CeeeEEE
Q psy16312 67 QDGVFLASIFGGET-----------LYELRSAVHLAEMERRGGVA-------SHISPFTQIRDVGSLLTRAG-FNMLTID 127 (245)
Q Consensus 67 pGG~l~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~l~~aG-F~~~~~~ 127 (245)
|||++++++.+..+ ...+..+|.... ..+... ..+..+++.+++..++++.| |.+..++
T Consensus 201 pGG~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~~mv--~eGli~~ek~d~f~~P~y~ps~~E~~~~ie~~G~F~i~~~e 278 (359)
T 1m6e_X 201 PGGRMVLTILGRRSEDRASTECCLIWQLLAMALNQMV--SEGLIEEEKMDKFNIPQYTPSPTEVEAEILKEGSFLIDHIE 278 (359)
T ss_dssp TTCEEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHH--HTTCSCCSTTGGGCCCCBCCCSHHHHHHHHHTTTBCCEEEE
T ss_pred CCceEEEEEecCCCCCccccchHHHHHHHHHHHHHHH--HccccchhhhhccCCCccCCCHHHHHHHHHHcCCceEEEEE
Confidence 99999998876544 224555554221 122111 22334688999999999885 5777766
Q ss_pred EEeE
Q psy16312 128 VDEI 131 (245)
Q Consensus 128 ~~~~ 131 (245)
....
T Consensus 279 ~~~~ 282 (359)
T 1m6e_X 279 ASEI 282 (359)
T ss_dssp EEEE
T ss_pred EEee
Confidence 5443
No 107
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=98.83 E-value=1.8e-08 Score=86.90 Aligned_cols=105 Identities=15% Similarity=0.223 Sum_probs=69.6
Q ss_pred EEEcCCCC---CCCCCCccceeeecccccccCC--------------------------------------hhHHHHHHH
Q psy16312 24 KKFVDEEH---LPFAENSVDLLISNLALHWVNN--------------------------------------LPGCFQQVL 62 (245)
Q Consensus 24 f~~~D~~~---l~~~~~~FD~Vis~~~l~~~~d--------------------------------------~~~~l~~i~ 62 (245)
|..+...+ -.|++++||+|+|+++|||+.+ ...+|+..+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44444433 4578899999999999999973 334688899
Q ss_pred hhhcCCcEEEEEecCCCcH-----HH--------HHHHHHHHHHHhcCCC-------CCcccCCCCHHHHHHHHH-hCCC
Q psy16312 63 KCLRQDGVFLASIFGGETL-----YE--------LRSAVHLAEMERRGGV-------ASHISPFTQIRDVGSLLT-RAGF 121 (245)
Q Consensus 63 r~LkpGG~l~~~~~~~~~~-----~~--------~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~l~-~aGF 121 (245)
+.|+|||++++++.+..+. .+ +..+|.. +...+.. ......+++.+++..+++ +.||
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~--l~~eG~i~~e~~d~f~~P~y~ps~~E~~~~l~~~~~F 290 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDD--LVREGLVAAEKRDGFNIPVYAPSLQDFKEVVDANGSF 290 (374)
T ss_dssp HHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHH--TTSSSSSCHHHHSSCCCCBCCCCHHHHHHHHHHHCSE
T ss_pred HHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHH--HHHhCCcchhhcccCCccccCCCHHHHHHHHHhcCCc
Confidence 9999999999998765432 11 2222211 1111111 112233578999999998 5999
Q ss_pred eeeEEEEEe
Q psy16312 122 NMLTIDVDE 130 (245)
Q Consensus 122 ~~~~~~~~~ 130 (245)
.+..++...
T Consensus 291 ~I~~le~~~ 299 (374)
T 3b5i_A 291 AIDKLVVYK 299 (374)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEe
Confidence 987777654
No 108
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.80 E-value=2e-09 Score=89.75 Aligned_cols=69 Identities=9% Similarity=0.013 Sum_probs=59.8
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|++++. +..+++|+++|+.+++ +++||+|++... .+++..++++++++|||||++++..
T Consensus 152 IDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d~~FDvV~~~a~---~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 152 VEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--GLEFDVLMVAAL---AEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp EESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--GCCCSEEEECTT---CSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--CCCcCEEEECCC---ccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 7999999999998653 2258999999999876 589999998654 5799999999999999999999875
No 109
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=98.77 E-value=8.1e-09 Score=83.38 Aligned_cols=73 Identities=14% Similarity=0.055 Sum_probs=60.0
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCC---CCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEH---LPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~---l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+|+.|++.+++++....|+..+.+|+.. .++..+++|+|++... +..++..++.+++++|||||+++++..
T Consensus 108 vD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~d~~--~~~~~~~~l~~~~r~LKpGG~lvI~ik 183 (233)
T 4df3_A 108 VEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYADVA--QPEQAAIVVRNARFFLRDGGYMLMAIK 183 (233)
T ss_dssp EECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEECCC--CTTHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEEecc--CChhHHHHHHHHHHhccCCCEEEEEEe
Confidence 799999999998877666789999998865 3456689999987543 445678899999999999999998763
No 110
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=98.77 E-value=4.1e-09 Score=98.11 Aligned_cols=75 Identities=11% Similarity=-0.076 Sum_probs=64.9
Q ss_pred CcChHHHHHhhCCCC--------CCCCceeEEEcCCCCCCCCCCccceeeecccccccCChh--HHHHHHHhhhcCCcEE
Q psy16312 2 CDNCESILSQAEPPE--------DTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLP--GCFQQVLKCLRQDGVF 71 (245)
Q Consensus 2 iD~S~~ml~~A~~~~--------~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~--~~l~~i~r~LkpGG~l 71 (245)
+|+|+.|++.|++++ .+..+++|+++|++++++.+++||+|+|..+++|++++. .++++++++|||| .+
T Consensus 752 VDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~L 830 (950)
T 3htx_A 752 VDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LL 830 (950)
T ss_dssp EESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EE
T ss_pred EECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EE
Confidence 799999999997722 123589999999999999889999999999999998866 5899999999999 88
Q ss_pred EEEecC
Q psy16312 72 LASIFG 77 (245)
Q Consensus 72 ~~~~~~ 77 (245)
+++++.
T Consensus 831 IISTPN 836 (950)
T 3htx_A 831 IVSTPN 836 (950)
T ss_dssp EEEECB
T ss_pred EEEecC
Confidence 888744
No 111
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.77 E-value=3.2e-09 Score=83.85 Aligned_cols=93 Identities=15% Similarity=0.094 Sum_probs=73.8
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCC
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGE 79 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~ 79 (245)
+|+|+.|++.|++++. ...++++.++|+.+.+ +++||+|+++..++++ ..++++++++|+|||+++++.+...
T Consensus 89 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~fD~i~~~~~~~~~---~~~l~~~~~~L~~gG~l~~~~~~~~ 163 (205)
T 3grz_A 89 TDISDESMTAAEENAALNGIYDIALQKTSLLADV--DGKFDLIVANILAEIL---LDLIPQLDSHLNEDGQVIFSGIDYL 163 (205)
T ss_dssp EESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC--CSCEEEEEEESCHHHH---HHHGGGSGGGEEEEEEEEEEEEEGG
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEeccccccC--CCCceEEEECCcHHHH---HHHHHHHHHhcCCCCEEEEEecCcc
Confidence 7999999999988643 2234999999997754 4899999999988875 7889999999999999998753322
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 80 TLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
+...+.++++++||+.+...
T Consensus 164 ----------------------------~~~~~~~~~~~~Gf~~~~~~ 183 (205)
T 3grz_A 164 ----------------------------QLPKIEQALAENSFQIDLKM 183 (205)
T ss_dssp ----------------------------GHHHHHHHHHHTTEEEEEEE
T ss_pred ----------------------------cHHHHHHHHHHcCCceEEee
Confidence 23466778889999986654
No 112
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.76 E-value=4e-09 Score=81.91 Aligned_cols=78 Identities=12% Similarity=0.032 Sum_probs=63.7
Q ss_pred CcChHHHHHhhCCCCC--CCCc--eeEEEcCCCCCCCCCCccceeeecccccc-cCChhHHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPED--TEVI--YEKKFVDEEHLPFAENSVDLLISNLALHW-VNNLPGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~--i~f~~~D~~~l~~~~~~FD~Vis~~~l~~-~~d~~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+|+.|++.|+++.. +..+ +++.++|+.+. +.+++||+|+++..++| ..+...++++++++|+|||++++.++
T Consensus 80 ~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 80 ADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYEN-VKDRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTT-CTTSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCccceEEEECchhcc-cccCCceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 7999999999988653 2234 99999999874 34579999999999887 45678999999999999999999876
Q ss_pred CCCc
Q psy16312 77 GGET 80 (245)
Q Consensus 77 ~~~~ 80 (245)
....
T Consensus 159 ~~~~ 162 (194)
T 1dus_A 159 TKQG 162 (194)
T ss_dssp STHH
T ss_pred CCCC
Confidence 5533
No 113
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.74 E-value=1.1e-08 Score=82.04 Aligned_cols=74 Identities=9% Similarity=0.010 Sum_probs=57.5
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCC-CCCCCccceeeecccccccCC-------------------hhHHHHH
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHL-PFAENSVDLLISNLALHWVNN-------------------LPGCFQQ 60 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l-~~~~~~FD~Vis~~~l~~~~d-------------------~~~~l~~ 60 (245)
+|+|+.|++.|++++.. ..+++++++|+..+ ++.+++||+|+++..+++..+ ...++++
T Consensus 85 vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 164 (230)
T 3evz_A 85 TEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEE 164 (230)
T ss_dssp EECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCCC---------------CCSSSCHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHH
Confidence 79999999999986532 23799999998644 455689999999977666543 3688999
Q ss_pred HHhhhcCCcEEEEEe
Q psy16312 61 VLKCLRQDGVFLASI 75 (245)
Q Consensus 61 i~r~LkpGG~l~~~~ 75 (245)
+.++|||||++++.+
T Consensus 165 ~~~~LkpgG~l~~~~ 179 (230)
T 3evz_A 165 AFDHLNPGGKVALYL 179 (230)
T ss_dssp HGGGEEEEEEEEEEE
T ss_pred HHHHhCCCeEEEEEe
Confidence 999999999998875
No 114
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.72 E-value=4.8e-09 Score=83.70 Aligned_cols=74 Identities=12% Similarity=0.166 Sum_probs=61.3
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCC--CCCCccceeeecccccccCC--------hhHHHHHHHhhhcCCc
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLP--FAENSVDLLISNLALHWVNN--------LPGCFQQVLKCLRQDG 69 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~--~~~~~FD~Vis~~~l~~~~d--------~~~~l~~i~r~LkpGG 69 (245)
+|+|+.|++.|++++. +..|+.++++|+.+++ +++++||.|++++...|... ...++++++++|||||
T Consensus 68 iD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG 147 (213)
T 2fca_A 68 IELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGG 147 (213)
T ss_dssp ECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSC
T ss_pred EEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECCCCCcCccccccccCcHHHHHHHHHHcCCCC
Confidence 7999999999988643 2357999999999876 66789999998877666543 3578999999999999
Q ss_pred EEEEEe
Q psy16312 70 VFLASI 75 (245)
Q Consensus 70 ~l~~~~ 75 (245)
.+++.+
T Consensus 148 ~l~~~t 153 (213)
T 2fca_A 148 SIHFKT 153 (213)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 999886
No 115
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.71 E-value=2.2e-09 Score=86.09 Aligned_cols=74 Identities=12% Similarity=0.066 Sum_probs=61.5
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCC-C--CCCCccceeeecccccccCChh--------HHHHHHHhhhcCC
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHL-P--FAENSVDLLISNLALHWVNNLP--------GCFQQVLKCLRQD 68 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l-~--~~~~~FD~Vis~~~l~~~~d~~--------~~l~~i~r~LkpG 68 (245)
+|+|+.|++.|++++. +..|+.|+++|+.++ + +++++||.|++++...|..... .++++++++||||
T Consensus 64 iD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpG 143 (218)
T 3dxy_A 64 IEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLG 143 (218)
T ss_dssp ECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEE
T ss_pred EEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCC
Confidence 7999999999987643 235799999999874 4 6789999999998877765433 5999999999999
Q ss_pred cEEEEEe
Q psy16312 69 GVFLASI 75 (245)
Q Consensus 69 G~l~~~~ 75 (245)
|++++.+
T Consensus 144 G~l~i~t 150 (218)
T 3dxy_A 144 GVFHMAT 150 (218)
T ss_dssp EEEEEEE
T ss_pred cEEEEEe
Confidence 9999887
No 116
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.71 E-value=1.1e-08 Score=82.92 Aligned_cols=70 Identities=16% Similarity=0.124 Sum_probs=58.7
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCC---CCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFA---ENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~---~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|+++.. +..+++++++|++++++. +++||+|+|.. +.++..++++++++|||||++++..
T Consensus 100 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~----~~~~~~~l~~~~~~LkpgG~l~~~~ 174 (240)
T 1xdz_A 100 VDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA----VARLSVLSELCLPLVKKNGLFVALK 174 (240)
T ss_dssp EESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC----CSCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec----cCCHHHHHHHHHHhcCCCCEEEEEe
Confidence 7999999999988643 224699999999888753 57999999976 4688999999999999999998763
No 117
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.69 E-value=1.8e-08 Score=79.42 Aligned_cols=71 Identities=10% Similarity=-0.098 Sum_probs=59.4
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|+++.. +..+++++++|+.+.....++||+|++..+++ ++..+++++.++|||||++++..
T Consensus 70 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~---~~~~~l~~~~~~LkpgG~l~~~~ 142 (204)
T 3e05_A 70 LERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLPDPDRVFIGGSGG---MLEEIIDAVDRRLKSEGVIVLNA 142 (204)
T ss_dssp EECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSCCCSEEEESCCTT---CHHHHHHHHHHHCCTTCEEEEEE
T ss_pred EeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCCCCCEEEECCCCc---CHHHHHHHHHHhcCCCeEEEEEe
Confidence 7999999999988643 22579999999976543347899999988775 88899999999999999999885
No 118
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.68 E-value=8.7e-09 Score=83.53 Aligned_cols=74 Identities=9% Similarity=0.016 Sum_probs=57.0
Q ss_pred CcChHHHHHhhCCCC--------CCCCceeEEEcCCCC-CC--CCCCccceeeecccccccCC--------hhHHHHHHH
Q psy16312 2 CDNCESILSQAEPPE--------DTEVIYEKKFVDEEH-LP--FAENSVDLLISNLALHWVNN--------LPGCFQQVL 62 (245)
Q Consensus 2 iD~S~~ml~~A~~~~--------~~~~~i~f~~~D~~~-l~--~~~~~FD~Vis~~~l~~~~d--------~~~~l~~i~ 62 (245)
+|+|+.|++.|++++ ....|+.++++|+.. ++ +++++||.|++++.-.|... ...++++++
T Consensus 76 iDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~ 155 (235)
T 3ckk_A 76 LEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYA 155 (235)
T ss_dssp EESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEEEEEEESCC-----------CCCHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHH
Confidence 799999999887532 223589999999987 66 77899999998776666432 147999999
Q ss_pred hhhcCCcEEEEEe
Q psy16312 63 KCLRQDGVFLASI 75 (245)
Q Consensus 63 r~LkpGG~l~~~~ 75 (245)
++|||||.|++.+
T Consensus 156 ~~LkpGG~l~~~t 168 (235)
T 3ckk_A 156 YVLRVGGLVYTIT 168 (235)
T ss_dssp HHEEEEEEEEEEE
T ss_pred HHCCCCCEEEEEe
Confidence 9999999999886
No 119
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.68 E-value=3.4e-09 Score=82.24 Aligned_cols=76 Identities=18% Similarity=0.146 Sum_probs=56.4
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCC-CCCCccceeeecc-cccc--------cCChhHHHHHHHhhhcCCc
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLP-FAENSVDLLISNL-ALHW--------VNNLPGCFQQVLKCLRQDG 69 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~-~~~~~FD~Vis~~-~l~~--------~~d~~~~l~~i~r~LkpGG 69 (245)
+|+|+.|++.|++++. +..++++++.|++.++ +.+++||+|+++. .+++ ..+...++++++++|||||
T Consensus 50 vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 129 (185)
T 3mti_A 50 FDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGG 129 (185)
T ss_dssp EESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCc
Confidence 7999999999998754 2257999998887753 4468899999873 2222 1234478899999999999
Q ss_pred EEEEEecC
Q psy16312 70 VFLASIFG 77 (245)
Q Consensus 70 ~l~~~~~~ 77 (245)
++++..+.
T Consensus 130 ~l~i~~~~ 137 (185)
T 3mti_A 130 RLAIMIYY 137 (185)
T ss_dssp EEEEEEC-
T ss_pred EEEEEEeC
Confidence 99988754
No 120
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.67 E-value=1.2e-08 Score=77.74 Aligned_cols=65 Identities=18% Similarity=0.212 Sum_probs=54.9
Q ss_pred CceeEEEcCCCCCC--------CCCCccceeeecccccccCCh-----------hHHHHHHHhhhcCCcEEEEEecCCCc
Q psy16312 20 VIYEKKFVDEEHLP--------FAENSVDLLISNLALHWVNNL-----------PGCFQQVLKCLRQDGVFLASIFGGET 80 (245)
Q Consensus 20 ~~i~f~~~D~~~l~--------~~~~~FD~Vis~~~l~~~~d~-----------~~~l~~i~r~LkpGG~l~~~~~~~~~ 80 (245)
.++.+.++|+.+++ +++++||+|+++..++|..++ ..+++++.++|+|||++++.++....
T Consensus 62 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~~~ 141 (180)
T 1ej0_A 62 VGVDFLQGDFRDELVMKALLERVGDSKVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVFQGEG 141 (180)
T ss_dssp TTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEESSTT
T ss_pred CcEEEEEcccccchhhhhhhccCCCCceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEecCCc
Confidence 46899999999876 667899999999999998876 78999999999999999998766555
Q ss_pred HHHH
Q psy16312 81 LYEL 84 (245)
Q Consensus 81 ~~~~ 84 (245)
..++
T Consensus 142 ~~~~ 145 (180)
T 1ej0_A 142 FDEY 145 (180)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 4443
No 121
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.67 E-value=1.2e-08 Score=78.43 Aligned_cols=70 Identities=14% Similarity=0.078 Sum_probs=55.4
Q ss_pred CcChHHHHHhhCCCCC--CCC-ceeEEEcCCCC-CCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPED--TEV-IYEKKFVDEEH-LPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~-~i~f~~~D~~~-l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+|+.|++.|++++. +.. ++ ++++|+.+ ++..+++||+|+++.++++ ..++++++++|||||++++...
T Consensus 55 vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~~~~~~~----~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 55 FEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFIGGGLTA----PGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp ECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEECC-TTC----TTHHHHHHHTCCTTCEEEEEEC
T ss_pred EeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEECCcccH----HHHHHHHHHhcCCCCEEEEEee
Confidence 7999999999987532 122 67 88888854 4433379999999999987 7899999999999999998864
No 122
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=98.67 E-value=1.1e-08 Score=88.63 Aligned_cols=77 Identities=13% Similarity=0.121 Sum_probs=65.4
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCCCCCCCccceeeecccccc-----cCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHLPFAENSVDLLISNLALHW-----VNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~-----~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|++++.. ..+++|+++|+.+.+..+++||+|+|+..+|+ ..+...++++++++|||||++++.+
T Consensus 261 vDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 261 VEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp EESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 79999999999987542 23589999999998776789999999999998 4556789999999999999999987
Q ss_pred cCC
Q psy16312 76 FGG 78 (245)
Q Consensus 76 ~~~ 78 (245)
...
T Consensus 341 n~~ 343 (381)
T 3dmg_A 341 NPF 343 (381)
T ss_dssp CTT
T ss_pred cCC
Confidence 544
No 123
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.67 E-value=6.9e-09 Score=84.43 Aligned_cols=74 Identities=22% Similarity=0.300 Sum_probs=60.5
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCCCCCCCccceeeecc-cccccC--ChhHHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHLPFAENSVDLLISNL-ALHWVN--NLPGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~-~l~~~~--d~~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+|+.|++.|+++... ..++.++++|+.+++++ ++||+|+|.+ .++++. +...++++++++|+|||++++...
T Consensus 69 vD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~fD~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~~ 146 (252)
T 1wzn_A 69 LDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFK-NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDFP 146 (252)
T ss_dssp EESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCC-SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHhcCCceEEEECChhhcccC-CCccEEEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEecc
Confidence 79999999999886531 24799999999998876 7899999864 455553 567899999999999999998764
No 124
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.66 E-value=3.2e-09 Score=82.82 Aligned_cols=76 Identities=7% Similarity=-0.044 Sum_probs=63.8
Q ss_pred CcChHHHHHhhCCCCCC--CCceeEEEcCCCCCC--CCCCccceeeeccccccc-CChhHHHHHHHh--hhcCCcEEEEE
Q psy16312 2 CDNCESILSQAEPPEDT--EVIYEKKFVDEEHLP--FAENSVDLLISNLALHWV-NNLPGCFQQVLK--CLRQDGVFLAS 74 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~--~~~i~f~~~D~~~l~--~~~~~FD~Vis~~~l~~~-~d~~~~l~~i~r--~LkpGG~l~~~ 74 (245)
+|+|+.|++.|++++.. ..+++++++|+.+++ +.+++||+|+++..+++. .+...++.++.+ +|+|||++++.
T Consensus 73 vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~ 152 (189)
T 3p9n_A 73 VESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVE 152 (189)
T ss_dssp EECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEE
Confidence 79999999999986532 247999999998764 446899999999888875 678899999999 99999999998
Q ss_pred ecC
Q psy16312 75 IFG 77 (245)
Q Consensus 75 ~~~ 77 (245)
...
T Consensus 153 ~~~ 155 (189)
T 3p9n_A 153 RAT 155 (189)
T ss_dssp EET
T ss_pred ecC
Confidence 643
No 125
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.65 E-value=2.1e-08 Score=79.38 Aligned_cols=95 Identities=11% Similarity=-0.001 Sum_probs=70.4
Q ss_pred CcChHHHHHhhCCCCC--CCC-ceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCC
Q psy16312 2 CDNCESILSQAEPPED--TEV-IYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGG 78 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~-~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~ 78 (245)
+|+|+.|++.|++++. +.. +++++++|+.+.......||+|++..++ ++. +++++.++|||||++++.....
T Consensus 83 vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~~~----~~~-~l~~~~~~LkpgG~lv~~~~~~ 157 (204)
T 3njr_A 83 IEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGGGG----SQA-LYDRLWEWLAPGTRIVANAVTL 157 (204)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECSCC----CHH-HHHHHHHHSCTTCEEEEEECSH
T ss_pred EeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECCcc----cHH-HHHHHHHhcCCCcEEEEEecCc
Confidence 7999999999988642 223 7999999998833223689999988754 566 9999999999999999986432
Q ss_pred CcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEEE
Q psy16312 79 ETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDVD 129 (245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~ 129 (245)
.+ ...+.+.+++.||++..+...
T Consensus 158 ~~----------------------------~~~~~~~l~~~g~~i~~i~~~ 180 (204)
T 3njr_A 158 ES----------------------------ETLLTQLHARHGGQLLRIDIA 180 (204)
T ss_dssp HH----------------------------HHHHHHHHHHHCSEEEEEEEE
T ss_pred cc----------------------------HHHHHHHHHhCCCcEEEEEee
Confidence 11 234455677778887666543
No 126
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.64 E-value=3.3e-09 Score=91.70 Aligned_cols=66 Identities=15% Similarity=0.222 Sum_probs=56.2
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCC------CCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFA------ENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~------~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|.. ..++++|+++|++++++. +++||+|+|..+ |+..++..+|++++++|||||++++..
T Consensus 253 VDiSp~m~~-------~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~~d~~~aL~el~rvLKPGGvlVi~D 324 (419)
T 3sso_A 253 LDIMDKSHV-------DELRIRTIQGDQNDAEFLDRIARRYGPFDIVIDDGS-HINAHVRTSFAALFPHVRPGGLYVIED 324 (419)
T ss_dssp EESSCCGGG-------CBTTEEEEECCTTCHHHHHHHHHHHCCEEEEEECSC-CCHHHHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EECCHHHhh-------cCCCcEEEEecccccchhhhhhcccCCccEEEECCc-ccchhHHHHHHHHHHhcCCCeEEEEEe
Confidence 688998841 125899999999998876 689999999754 677789999999999999999999985
No 127
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.63 E-value=2.3e-08 Score=80.50 Aligned_cols=67 Identities=10% Similarity=0.031 Sum_probs=57.2
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCC----CCCCCCccceeeecccccccCCh---hHHHHHHHhhhcCCcEEEEE
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEH----LPFAENSVDLLISNLALHWVNNL---PGCFQQVLKCLRQDGVFLAS 74 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~----l~~~~~~FD~Vis~~~l~~~~d~---~~~l~~i~r~LkpGG~l~~~ 74 (245)
+|+|+.|++.|++++....++.++++|++. +++. ++||+|+ ++++++ ..+++++.++|||||++++.
T Consensus 104 vD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~-~~~D~v~-----~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 104 IEYAPRIMRELLDACAERENIIPILGDANKPQEYANIV-EKVDVIY-----EDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTS-CCEEEEE-----ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccC-ccEEEEE-----EecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 799999999988766544689999999998 7776 7999998 455677 77899999999999999887
No 128
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.62 E-value=5.3e-09 Score=89.12 Aligned_cols=121 Identities=9% Similarity=-0.009 Sum_probs=58.4
Q ss_pred CcChHHHHHhhCCCCCC-------------CCceeEEEcCCCCC--CCCCCccceeeecccccccCChhHHHHHHHhhhc
Q psy16312 2 CDNCESILSQAEPPEDT-------------EVIYEKKFVDEEHL--PFAENSVDLLISNLALHWVNNLPGCFQQVLKCLR 66 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-------------~~~i~f~~~D~~~l--~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~Lk 66 (245)
+|+|+.|++.|+++... ..++++.++|+.++ ++++++||+|++.. +++..++.+++++||
T Consensus 136 vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~-----~~~~~~l~~~~~~Lk 210 (336)
T 2b25_A 136 FEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATEDIKSLTFDAVALDM-----LNPHVTLPVFYPHLK 210 (336)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC-------EEEEEECS-----SSTTTTHHHHGGGEE
T ss_pred EeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccccCCCCeeEEEECC-----CCHHHHHHHHHHhcC
Confidence 69999999999885431 24799999999987 56667899999854 356669999999999
Q ss_pred CCcEEEEEecCCCcHHHHHHHHHHHHHHhcCC-----CCCcccCCC------CHHHHHHHHHhCCCeeeEEEEEe
Q psy16312 67 QDGVFLASIFGGETLYELRSAVHLAEMERRGG-----VASHISPFT------QIRDVGSLLTRAGFNMLTIDVDE 130 (245)
Q Consensus 67 pGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~------~~~~~~~~l~~aGF~~~~~~~~~ 130 (245)
|||++++.........+....+... .... .......|. ....+.+.|+.+||+++.+....
T Consensus 211 pgG~lv~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~w~~~~~~~~~g~y~~~l~~aGF~~v~~~~~~ 282 (336)
T 2b25_A 211 HGGVCAVYVVNITQVIELLDGIRTC---ELALSCEKISEVIVRDWLVCLAKQKNGILAQKVESKINTDVQLDSQE 282 (336)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHH---TCCEEEEEEECCCCCCEEECC--------------------------
T ss_pred CCcEEEEEeCCHHHHHHHHHHHHhc---CCCcccceEEEecccceEEEeecccccchhhhhcccccccccccccc
Confidence 9999998764333333322222110 0000 000001111 11278889999999998776554
No 129
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.62 E-value=1.8e-08 Score=82.84 Aligned_cols=70 Identities=10% Similarity=0.096 Sum_probs=54.6
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCC-----CCCccceeeecccccccC--ChhHHHHHHHhhhcCCcEEEEE
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPF-----AENSVDLLISNLALHWVN--NLPGCFQQVLKCLRQDGVFLAS 74 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~-----~~~~FD~Vis~~~l~~~~--d~~~~l~~i~r~LkpGG~l~~~ 74 (245)
+|+|+.|++.|+++.... ++.+++++++. .+++||+|+|+.++||+. +...++++++++| |||+++++
T Consensus 73 vD~S~~ml~~Ar~~~~~~----~v~~~~~~~~~~~~~~~~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 73 FDFSQRMCDDLAEALADR----CVTIDLLDITAEIPKELAGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp EESCHHHHHHHHHHTSSS----CCEEEECCTTSCCCGGGTTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred EECCHHHHHHHHHHHHhc----cceeeeeecccccccccCCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 799999999999887632 23334443332 147899999999999885 4567999999999 99999998
Q ss_pred ec
Q psy16312 75 IF 76 (245)
Q Consensus 75 ~~ 76 (245)
+.
T Consensus 148 ~~ 149 (261)
T 3iv6_A 148 VK 149 (261)
T ss_dssp EE
T ss_pred ec
Confidence 74
No 130
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.62 E-value=9.8e-09 Score=86.42 Aligned_cols=103 Identities=14% Similarity=0.151 Sum_probs=72.0
Q ss_pred CCcChHHHHHhhCCCCC------CCCceeEEEcCCCCCCC--CCCccceeeecccccccCCh----hHHHHHHHhhhcCC
Q psy16312 1 MCDNCESILSQAEPPED------TEVIYEKKFVDEEHLPF--AENSVDLLISNLALHWVNNL----PGCFQQVLKCLRQD 68 (245)
Q Consensus 1 ~iD~S~~ml~~A~~~~~------~~~~i~f~~~D~~~l~~--~~~~FD~Vis~~~l~~~~d~----~~~l~~i~r~LkpG 68 (245)
.+|+|+.|++.|+++++ ..++++++++|+..++. .+++||+|++....++.++. ..++++++++||||
T Consensus 124 ~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~Lkpg 203 (304)
T 3bwc_A 124 LVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPD 203 (304)
T ss_dssp EEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEEEEECC---------CCHHHHHHHHHHEEEE
T ss_pred EEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEEEECCCCccccchhhhHHHHHHHHHHhcCCC
Confidence 37999999999998762 23679999999987653 36899999998776664433 58899999999999
Q ss_pred cEEEEEecCCCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 69 GVFLASIFGGETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 69 G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
|++++....+.. . ......+.+.|+++||..+...
T Consensus 204 G~lv~~~~~~~~--~----------------------~~~~~~~~~~l~~~GF~~v~~~ 238 (304)
T 3bwc_A 204 GICCNQGESIWL--D----------------------LELIEKMSRFIRETGFASVQYA 238 (304)
T ss_dssp EEEEEEECCTTT--C----------------------HHHHHHHHHHHHHHTCSEEEEE
T ss_pred cEEEEecCCccc--c----------------------hHHHHHHHHHHHhCCCCcEEEE
Confidence 999987532210 0 0123467778888999865443
No 131
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.59 E-value=1.3e-07 Score=78.55 Aligned_cols=104 Identities=12% Similarity=0.083 Sum_probs=76.3
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCC
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGG 78 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~ 78 (245)
+|+|+.|++.|++++. + ..+++|+++|+.+++. +++||+|+++.. .+...++.++.++|||||++++..+.+
T Consensus 154 vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-~~~fD~Vi~~~p----~~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 154 IEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-ENIADRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp ECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-CSCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-cCCccEEEECCc----hhHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 7999999999988643 2 2348999999999877 589999998643 355789999999999999999876443
Q ss_pred CcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEEEeEE
Q psy16312 79 ETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDVDEIV 132 (245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~~~~ 132 (245)
... ..-.....+.+.+.++||....+......
T Consensus 229 ~~~----------------------~~~~~~~~i~~~~~~~G~~~~~~~~~~v~ 260 (278)
T 2frn_A 229 EKL----------------------MPREPFETFKRITKEYGYDVEKLNELKIK 260 (278)
T ss_dssp GGG----------------------TTTTTHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred ccc----------------------ccccHHHHHHHHHHHcCCeeEEeeeEEEE
Confidence 110 01113466788889999987665543333
No 132
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.58 E-value=1.1e-08 Score=80.96 Aligned_cols=70 Identities=13% Similarity=0.045 Sum_probs=59.6
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+|+|+.|++.|++++. +..++++.++|+...+..+++||+|++..+++++++ ++.++|||||++++.+..
T Consensus 105 vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~~~~~~~------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 105 VERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAAPPEIPT------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSBCSSCCT------HHHHTEEEEEEEEEEECS
T ss_pred EecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccchhhhhH------HHHHhcccCcEEEEEEcC
Confidence 7999999999988653 234799999999887666789999999999999975 589999999999998744
No 133
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.58 E-value=2.7e-08 Score=82.32 Aligned_cols=95 Identities=16% Similarity=0.123 Sum_probs=69.7
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCCCccceeeecccc-------------cccC------------Ch
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAENSVDLLISNLAL-------------HWVN------------NL 54 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l-------------~~~~------------d~ 54 (245)
+|+|+.|++.|++++. +..+++|+++|+.+. +++++||+|+|+... +|.+ +.
T Consensus 139 vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~-~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~ 217 (276)
T 2b3t_A 139 VDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSA-LAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADI 217 (276)
T ss_dssp ECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGG-GTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHH
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEEcchhhh-cccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHH
Confidence 7999999999998653 223699999999763 335789999998433 2222 34
Q ss_pred hHHHHHHHhhhcCCcEEEEEecCCCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEE
Q psy16312 55 PGCFQQVLKCLRQDGVFLASIFGGETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTI 126 (245)
Q Consensus 55 ~~~l~~i~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~ 126 (245)
...+.++.++|+|||++++... +.....+.++++++||..+.+
T Consensus 218 ~~~l~~~~~~LkpgG~l~~~~~-----------------------------~~~~~~~~~~l~~~Gf~~v~~ 260 (276)
T 2b3t_A 218 VHIIEQSRNALVSGGFLLLEHG-----------------------------WQQGEAVRQAFILAGYHDVET 260 (276)
T ss_dssp HHHHHHHGGGEEEEEEEEEECC-----------------------------SSCHHHHHHHHHHTTCTTCCE
T ss_pred HHHHHHHHHhcCCCCEEEEEEC-----------------------------chHHHHHHHHHHHCCCcEEEE
Confidence 6788999999999999998731 112456777888889876443
No 134
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.57 E-value=8.2e-09 Score=80.87 Aligned_cols=76 Identities=9% Similarity=0.076 Sum_probs=60.4
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCC-CCCCccceeeeccccccc---------CChhHHHHHHHhhhcCC
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLP-FAENSVDLLISNLALHWV---------NNLPGCFQQVLKCLRQD 68 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~-~~~~~FD~Vis~~~l~~~---------~d~~~~l~~i~r~LkpG 68 (245)
+|+|+.|++.|++++.. ..+++++++|+++++ +.+++||+|+++..+... .+...+++++.++||||
T Consensus 53 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~g 132 (197)
T 3eey_A 53 FDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTG 132 (197)
T ss_dssp ECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCC
Confidence 79999999999887532 257999999998876 556899999998765111 13457999999999999
Q ss_pred cEEEEEecC
Q psy16312 69 GVFLASIFG 77 (245)
Q Consensus 69 G~l~~~~~~ 77 (245)
|++++..+.
T Consensus 133 G~l~~~~~~ 141 (197)
T 3eey_A 133 GIITVVIYY 141 (197)
T ss_dssp EEEEEEECC
T ss_pred CEEEEEEcc
Confidence 999988754
No 135
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.55 E-value=2.4e-08 Score=82.69 Aligned_cols=68 Identities=12% Similarity=0.013 Sum_probs=58.1
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|++++.. ..++++.++|+.+ ++++++||+|++ +++++..+++++.++|||||++++.+
T Consensus 141 vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~-~~~~~~fD~Vi~-----~~~~~~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 141 VERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD-FISDQMYDAVIA-----DIPDPWNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp ECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT-CCCSCCEEEEEE-----CCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHhcCCCCcEEEEECchhc-cCcCCCccEEEE-----cCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 79999999999886432 2579999999987 566688999998 46788999999999999999999886
No 136
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.53 E-value=2.8e-08 Score=79.15 Aligned_cols=71 Identities=11% Similarity=0.082 Sum_probs=50.1
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCC----CCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHL----PFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l----~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.+.+.+....++.++++|+... ++. ++||+|+|+...+ .+...++++++++|||||+|++..
T Consensus 87 vD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~-~~fD~V~~~~~~~--~~~~~~l~~~~r~LkpgG~l~i~~ 161 (210)
T 1nt2_A 87 VEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIV-EKVDLIYQDIAQK--NQIEILKANAEFFLKEKGEVVIMV 161 (210)
T ss_dssp ECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTC-CCEEEEEECCCST--THHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccc-cceeEEEEeccCh--hHHHHHHHHHHHHhCCCCEEEEEE
Confidence 7999987644332221124788999999873 555 8999999984211 123345899999999999999885
No 137
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.52 E-value=5.6e-08 Score=79.67 Aligned_cols=74 Identities=15% Similarity=0.075 Sum_probs=57.3
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCC--CCCCccceeeeccccccc--------------------CChhH
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLP--FAENSVDLLISNLALHWV--------------------NNLPG 56 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~--~~~~~FD~Vis~~~l~~~--------------------~d~~~ 56 (245)
+|+++.|++.|++++. . ..+++++++|+.+++ +++++||+|+|+-.++.. .+...
T Consensus 78 vDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 157 (259)
T 3lpm_A 78 VEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLED 157 (259)
T ss_dssp ECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCCC-----------------------HHHHH
T ss_pred EECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHH
Confidence 7999999999988643 1 236999999999875 456899999997554332 12457
Q ss_pred HHHHHHhhhcCCcEEEEEe
Q psy16312 57 CFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 57 ~l~~i~r~LkpGG~l~~~~ 75 (245)
+++.+.++|||||++++..
T Consensus 158 ~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 158 TIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp HHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHccCCcEEEEEE
Confidence 9999999999999999864
No 138
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.52 E-value=2.2e-08 Score=85.63 Aligned_cols=70 Identities=24% Similarity=0.175 Sum_probs=58.9
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCCCCCCccceeeecc---cccccCChhHHHHHHHhhhcCCcEEE
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLPFAENSVDLLISNL---ALHWVNNLPGCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~---~l~~~~d~~~~l~~i~r~LkpGG~l~ 72 (245)
+|+|+ |++.|+++.. + ..+++++++|++++++++++||+|+|.. .+.+..++..++.++.++|||||+++
T Consensus 93 vD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 93 VDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp EESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred EChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEE
Confidence 68996 9999987542 1 2579999999999998888999999976 46666678889999999999999987
No 139
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.52 E-value=6.5e-09 Score=84.14 Aligned_cols=120 Identities=16% Similarity=0.139 Sum_probs=69.3
Q ss_pred CcChHHHHHhhCCCCCC-----CCceeEEE-cCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPEDT-----EVIYEKKF-VDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-----~~~i~f~~-~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|+++.+. ..++.+.. .|+....+...+||+++++. ..++++++++|||||++++.+
T Consensus 66 vDis~~ml~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~D~v~~~l--------~~~l~~i~rvLkpgG~lv~~~ 137 (232)
T 3opn_A 66 LDVGTNQLAWKIRSDERVVVMEQFNFRNAVLADFEQGRPSFTSIDVSFISL--------DLILPPLYEILEKNGEVAALI 137 (232)
T ss_dssp ECSSCCCCCHHHHTCTTEEEECSCCGGGCCGGGCCSCCCSEEEECCSSSCG--------GGTHHHHHHHSCTTCEEEEEE
T ss_pred EcCCHHHHHHHHHhCccccccccceEEEeCHhHcCcCCCCEEEEEEEhhhH--------HHHHHHHHHhccCCCEEEEEE
Confidence 79999999998776541 12343333 33332223334666665542 789999999999999998865
Q ss_pred cCCCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEEEeEEEeCC
Q psy16312 76 FGGETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDVDEIVIHYP 136 (245)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~~~~~~~~ 136 (245)
. +..+ ..+. .....+..........+.+++.++++++||+++.+....++..+.
T Consensus 138 -~--p~~e--~~~~--~~~~~G~~~d~~~~~~~~~~l~~~l~~aGf~v~~~~~~pi~g~~g 191 (232)
T 3opn_A 138 -K--PQFE--AGRE--QVGKNGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPIKGGAG 191 (232)
T ss_dssp -C--HHHH--SCHH--HHC-CCCCCCHHHHHHHHHHHHHHHHHHTEEEEEEEECSSCBTTT
T ss_pred -C--cccc--cCHH--HhCcCCeecCcchhHHHHHHHHHHHHHCCCEEEEEEEccCCCCCC
Confidence 1 2111 1110 011111110101112367889999999999987777555444333
No 140
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.51 E-value=2.6e-08 Score=81.23 Aligned_cols=69 Identities=14% Similarity=0.073 Sum_probs=59.2
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|++++.. ..++++.++|+.+.++++++||+|++. .+++..+++++.++|+|||++++..
T Consensus 127 ~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 127 YEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVALD-----LMEPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp EESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEEE-----SSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred EeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEEC-----CcCHHHHHHHHHHhCCCCCEEEEEe
Confidence 69999999999886421 257999999999888877899999983 5688899999999999999999886
No 141
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.50 E-value=3.3e-08 Score=84.78 Aligned_cols=71 Identities=20% Similarity=0.194 Sum_probs=59.0
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCCCCCCccceeeeccc---ccccCChhHHHHHHHhhhcCCcEEEE
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLPFAENSVDLLISNLA---LHWVNNLPGCFQQVLKCLRQDGVFLA 73 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~---l~~~~d~~~~l~~i~r~LkpGG~l~~ 73 (245)
+|+| .|++.|+++.. + ..+++++++|++++++++++||+|+|..+ +++..++..++.++.++|||||++++
T Consensus 95 vD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 95 IECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp EECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEES
T ss_pred ECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEcc
Confidence 7999 49999987543 1 23499999999999988899999999765 44557889999999999999999864
No 142
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.49 E-value=4.3e-08 Score=78.68 Aligned_cols=70 Identities=11% Similarity=-0.049 Sum_probs=57.8
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+|+|+.|++.|+++.....++++.++|+......+++||+|++..+++++. .++.++|+|||++++.+..
T Consensus 98 vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 98 VEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPYDRVVVWATAPTLL------CKPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp EESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEECS
T ss_pred EeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCccEEEECCcHHHHH------HHHHHHcCCCcEEEEEEcC
Confidence 799999999999876532379999999987333457899999999999885 3689999999999988643
No 143
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.48 E-value=3.2e-08 Score=81.79 Aligned_cols=70 Identities=13% Similarity=0.086 Sum_probs=59.7
Q ss_pred CcChHHHHHhhCCCCCC-----CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPEDT-----EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-----~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+|+.|++.|+++... ..++++.++|+.+.++++++||+|++. ++++..++.++.++|+|||++++.+.
T Consensus 130 vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v~~~-----~~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 130 YEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRAVLD-----MLAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp ECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEEEEE-----SSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred EeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEEEEC-----CcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 69999999999886421 257999999999988877899999983 45888999999999999999998874
No 144
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.46 E-value=2.3e-08 Score=83.30 Aligned_cols=114 Identities=14% Similarity=0.102 Sum_probs=67.8
Q ss_pred CcChHHHHHhhCCCCCCCCcee-EEEcCCCCCC---CCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 2 CDNCESILSQAEPPEDTEVIYE-KKFVDEEHLP---FAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~-f~~~D~~~l~---~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+|+|++||+.+.++.+ ++. +...|+..++ ++..+||+|+|..+++++ ..+|.+++++|||||++++.+-
T Consensus 114 VDvs~~mL~~a~r~~~---rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~sf~sl---~~vL~e~~rvLkpGG~lv~lvk- 186 (291)
T 3hp7_A 114 VDVGTNQLVWKLRQDD---RVRSMEQYNFRYAEPVDFTEGLPSFASIDVSFISL---NLILPALAKILVDGGQVVALVK- 186 (291)
T ss_dssp ECSSSSCSCHHHHTCT---TEEEECSCCGGGCCGGGCTTCCCSEEEECCSSSCG---GGTHHHHHHHSCTTCEEEEEEC-
T ss_pred EECCHHHHHHHHHhCc---ccceecccCceecchhhCCCCCCCEEEEEeeHhhH---HHHHHHHHHHcCcCCEEEEEEC-
Confidence 7999999998544322 222 2223443333 233469999999888754 8999999999999999988641
Q ss_pred CCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 78 GETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
|. + +..... ....+............+++.+++.++||.+..+..
T Consensus 187 Pq-f-e~~~~~----~~~~G~vrd~~~~~~~~~~v~~~~~~~Gf~v~~~~~ 231 (291)
T 3hp7_A 187 PQ-F-EAGREQ----IGKNGIVRESSIHEKVLETVTAFAVDYGFSVKGLDF 231 (291)
T ss_dssp GG-G-TSCGGG----CC-CCCCCCHHHHHHHHHHHHHHHHHTTEEEEEEEE
T ss_pred cc-c-ccChhh----cCCCCccCCHHHHHHHHHHHHHHHHHCCCEEEEEEE
Confidence 11 1 100000 000011000011123567788999999999866554
No 145
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.46 E-value=1.9e-08 Score=79.44 Aligned_cols=75 Identities=8% Similarity=0.010 Sum_probs=59.6
Q ss_pred CcChHHHHHhhCCCCC--CC--CceeEEEcCCCCCCC--CCCc-cceeeecccccccCChhHHHHHH--HhhhcCCcEEE
Q psy16312 2 CDNCESILSQAEPPED--TE--VIYEKKFVDEEHLPF--AENS-VDLLISNLALHWVNNLPGCFQQV--LKCLRQDGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~--~~i~f~~~D~~~l~~--~~~~-FD~Vis~~~l~~~~d~~~~l~~i--~r~LkpGG~l~ 72 (245)
+|+|+.|++.|++++. +. .+++++++|+.++.. .+++ ||+|+++..++ ..+...+++.+ .++|+|||+++
T Consensus 82 vD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~~-~~~~~~~l~~~~~~~~LkpgG~l~ 160 (201)
T 2ift_A 82 LELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFLDPPFH-FNLAEQAISLLCENNWLKPNALIY 160 (201)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEECCCSS-SCHHHHHHHHHHHTTCEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEECCCCC-CccHHHHHHHHHhcCccCCCcEEE
Confidence 7999999999998653 22 479999999877532 3578 99999988765 45677889999 67899999999
Q ss_pred EEecC
Q psy16312 73 ASIFG 77 (245)
Q Consensus 73 ~~~~~ 77 (245)
+++..
T Consensus 161 i~~~~ 165 (201)
T 2ift_A 161 VETEK 165 (201)
T ss_dssp EEEES
T ss_pred EEECC
Confidence 88643
No 146
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.46 E-value=4.9e-08 Score=79.63 Aligned_cols=118 Identities=10% Similarity=0.064 Sum_probs=69.6
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCC---CCC---CCccceeeecccccccC---------------ChhHH
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHL---PFA---ENSVDLLISNLALHWVN---------------NLPGC 57 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l---~~~---~~~FD~Vis~~~l~~~~---------------d~~~~ 57 (245)
+|+|+.|++.|++++. + ..+++++++|+++. +++ +++||+|+|+-.+++.. ....+
T Consensus 95 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l 174 (254)
T 2h00_A 95 TEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVN 174 (254)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEEEECCCCC-----------------------
T ss_pred EECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEEEECCCCccCcchhcccccccccccCCHHHH
Confidence 7999999999988643 1 13599999998762 444 26899999986555432 11245
Q ss_pred HHHHHhhhcCCcEEEEEecCCCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 58 FQQVLKCLRQDGVFLASIFGGETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 58 l~~i~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
+.+++++|||||.+.+.. .+ +...... ....+..............+.++|+++||..+.+.
T Consensus 175 ~~~~~~~LkpgG~l~~~~----~~--~~~~~~~--l~~~g~~~~~~~~~~~~~~~~~~l~~~Gf~~v~~~ 236 (254)
T 2h00_A 175 TGGITEIMAEGGELEFVK----RI--IHDSLQL--KKRLRWYSCMLGKKCSLAPLKEELRIQGVPKVTYT 236 (254)
T ss_dssp --CTTTTHHHHTHHHHHH----HH--HHHHHHH--GGGBSCEEEEESSTTSHHHHHHHHHHTTCSEEEEE
T ss_pred hhhHHHHEecCCEEEEEH----HH--HHHHHhc--ccceEEEEECCCChhHHHHHHHHHHHcCCCceEEE
Confidence 788999999999876542 11 1111110 11111111111223345788899999999876544
No 147
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.46 E-value=8.3e-08 Score=82.03 Aligned_cols=75 Identities=15% Similarity=0.107 Sum_probs=60.5
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCCCCCCCccceeeecccccc-----cCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHLPFAENSVDLLISNLALHW-----VNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~-----~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|+++... ..++.+..+|+.+.+ +++||+|+|+..+|+ ..+...++++++++|||||.+++..
T Consensus 226 vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~--~~~fD~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 303 (343)
T 2pjd_A 226 CDVSAPAVEASRATLAANGVEGEVFASNVFSEV--KGRFDMIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIVA 303 (343)
T ss_dssp EESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC--CSCEEEEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHhCCCCEEEEccccccc--cCCeeEEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEEE
Confidence 79999999999886531 234678889987654 579999999999986 3456789999999999999999886
Q ss_pred cCC
Q psy16312 76 FGG 78 (245)
Q Consensus 76 ~~~ 78 (245)
...
T Consensus 304 ~~~ 306 (343)
T 2pjd_A 304 NAF 306 (343)
T ss_dssp ETT
T ss_pred cCC
Confidence 443
No 148
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.44 E-value=2e-08 Score=87.17 Aligned_cols=72 Identities=11% Similarity=0.110 Sum_probs=59.2
Q ss_pred CcChHHHHHhhCCCC----------C-CCCceeEEEcCCCCCCCCC--CccceeeecccccccCChhHHHHHHHhhhcCC
Q psy16312 2 CDNCESILSQAEPPE----------D-TEVIYEKKFVDEEHLPFAE--NSVDLLISNLALHWVNNLPGCFQQVLKCLRQD 68 (245)
Q Consensus 2 iD~S~~ml~~A~~~~----------~-~~~~i~f~~~D~~~l~~~~--~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpG 68 (245)
||+|+.|++.|+++. + ...+|+|+++|+.++++.+ ..||+|+++..++ .++....|.+++++||||
T Consensus 203 IDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp~~d~~~~aDVVf~Nn~~F-~pdl~~aL~Ei~RvLKPG 281 (438)
T 3uwp_A 203 VEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEEWRERIANTSVIFVNNFAF-GPEVDHQLKERFANMKEG 281 (438)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHHHHHHHHTCSEEEECCTTC-CHHHHHHHHHHHTTSCTT
T ss_pred EeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCccccccCCccEEEEccccc-CchHHHHHHHHHHcCCCC
Confidence 799999999987632 1 0257999999999988753 4799999987764 468889999999999999
Q ss_pred cEEEEE
Q psy16312 69 GVFLAS 74 (245)
Q Consensus 69 G~l~~~ 74 (245)
|+|+++
T Consensus 282 GrIVss 287 (438)
T 3uwp_A 282 GRIVSS 287 (438)
T ss_dssp CEEEES
T ss_pred cEEEEe
Confidence 999876
No 149
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.44 E-value=1.2e-08 Score=80.47 Aligned_cols=73 Identities=11% Similarity=0.012 Sum_probs=41.0
Q ss_pred CcChHHHHHhhCCCCCCC-CceeEEEcCCCCCCCCC-----CccceeeecccccccCCh---------------------
Q psy16312 2 CDNCESILSQAEPPEDTE-VIYEKKFVDEEHLPFAE-----NSVDLLISNLALHWVNNL--------------------- 54 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~-~~i~f~~~D~~~l~~~~-----~~FD~Vis~~~l~~~~d~--------------------- 54 (245)
+|+|+.|++.|++++... .+++++++|+.+ ++.+ ++||+|+++..+++..+.
T Consensus 60 vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (215)
T 4dzr_A 60 VDLSMDALAVARRNAERFGAVVDWAAADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGED 138 (215)
T ss_dssp EECC-------------------CCHHHHHH-HHHHHHHTTCCBSEEEECCCCCC------------------------C
T ss_pred EECCHHHHHHHHHHHHHhCCceEEEEcchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccccCCCc
Confidence 799999999999887531 268899999887 5544 899999997655443322
Q ss_pred -----hHHHHHHHhhhcCCcE-EEEEe
Q psy16312 55 -----PGCFQQVLKCLRQDGV-FLASI 75 (245)
Q Consensus 55 -----~~~l~~i~r~LkpGG~-l~~~~ 75 (245)
..++++++++|||||+ +++..
T Consensus 139 ~~~~~~~~l~~~~~~LkpgG~l~~~~~ 165 (215)
T 4dzr_A 139 GLQFYRRMAALPPYVLARGRAGVFLEV 165 (215)
T ss_dssp TTHHHHHHHTCCGGGBCSSSEEEEEEC
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 6788999999999999 55553
No 150
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.43 E-value=4.6e-08 Score=80.09 Aligned_cols=95 Identities=21% Similarity=0.103 Sum_probs=72.1
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCCc
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGET 80 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~~ 80 (245)
+|+|+.|++.|++++.. ...+++.++|+... +++++||+|+++...++ ...++.+++++|||||+++++.+...
T Consensus 148 vDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~-~~~~~fD~Vv~n~~~~~---~~~~l~~~~~~LkpgG~lils~~~~~- 222 (254)
T 2nxc_A 148 VDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA-LPFGPFDLLVANLYAEL---HAALAPRYREALVPGGRALLTGILKD- 222 (254)
T ss_dssp EESCGGGHHHHHHHHHHTTCCCEEEESCHHHH-GGGCCEEEEEEECCHHH---HHHHHHHHHHHEEEEEEEEEEEEEGG-
T ss_pred EECCHHHHHHHHHHHHHcCCcEEEEECChhhc-CcCCCCCEEEECCcHHH---HHHHHHHHHHHcCCCCEEEEEeeccC-
Confidence 79999999999886531 12288999988762 34578999999877665 36899999999999999998753221
Q ss_pred HHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEE
Q psy16312 81 LYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~ 128 (245)
....+.+.++++||+++....
T Consensus 223 ---------------------------~~~~v~~~l~~~Gf~~~~~~~ 243 (254)
T 2nxc_A 223 ---------------------------RAPLVREAMAGAGFRPLEEAA 243 (254)
T ss_dssp ---------------------------GHHHHHHHHHHTTCEEEEEEE
T ss_pred ---------------------------CHHHHHHHHHHCCCEEEEEec
Confidence 245678888999999866543
No 151
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.42 E-value=3.9e-07 Score=75.07 Aligned_cols=74 Identities=11% Similarity=0.052 Sum_probs=54.8
Q ss_pred CcChHHHHHhhCCCCC----CCCceeEE--EcCCCCCCCCCCccceeeecccccccCChh-------HHHHHHHhhhcCC
Q psy16312 2 CDNCESILSQAEPPED----TEVIYEKK--FVDEEHLPFAENSVDLLISNLALHWVNNLP-------GCFQQVLKCLRQD 68 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~----~~~~i~f~--~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~-------~~l~~i~r~LkpG 68 (245)
+|+|+ |+..++++.. ...++.|+ ++|+.+++ +++||+|+|..+ ++..++. .+|..++++||||
T Consensus 101 vD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~V~sd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpG 176 (265)
T 2oxt_A 101 VRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP--VERTDVIMCDVG-ESSPKWSVESERTIKILELLEKWKVKN 176 (265)
T ss_dssp EEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred EECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC--CCCCcEEEEeCc-ccCCccchhHHHHHHHHHHHHHHhccC
Confidence 68888 7655443211 01278999 99999887 579999999877 5554432 3789999999999
Q ss_pred c--EEEEEecCCC
Q psy16312 69 G--VFLASIFGGE 79 (245)
Q Consensus 69 G--~l~~~~~~~~ 79 (245)
| .|++.++.+.
T Consensus 177 G~~~fv~kv~~~~ 189 (265)
T 2oxt_A 177 PSADFVVKVLCPY 189 (265)
T ss_dssp TTCEEEEEESCTT
T ss_pred CCeEEEEEeCCCC
Confidence 9 9999887743
No 152
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.42 E-value=2.3e-07 Score=76.90 Aligned_cols=75 Identities=7% Similarity=0.028 Sum_probs=55.7
Q ss_pred CcChHHHHHhhCCCCC----CCCceeEE--EcCCCCCCCCCCccceeeecccccccCChh-------HHHHHHHhhhcCC
Q psy16312 2 CDNCESILSQAEPPED----TEVIYEKK--FVDEEHLPFAENSVDLLISNLALHWVNNLP-------GCFQQVLKCLRQD 68 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~----~~~~i~f~--~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~-------~~l~~i~r~LkpG 68 (245)
+|+|+ |+..|+++.. ...++.|+ ++|+++++ +++||+|+|..+ ++..++. .+|.++.++||||
T Consensus 109 VD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~--~~~fD~Vvsd~~-~~~~~~~~d~~~~l~~L~~~~r~LkpG 184 (276)
T 2wa2_A 109 VKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME--PFQADTVLCDIG-ESNPTAAVEASRTLTVLNVISRWLEYN 184 (276)
T ss_dssp EEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC--CCCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHHHS
T ss_pred EECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC--CCCcCEEEECCC-cCCCchhhhHHHHHHHHHHHHHHhccC
Confidence 68888 7655544311 11278999 99999887 589999999887 5544431 3799999999999
Q ss_pred c--EEEEEecCCCc
Q psy16312 69 G--VFLASIFGGET 80 (245)
Q Consensus 69 G--~l~~~~~~~~~ 80 (245)
| .|++.++.+..
T Consensus 185 G~~~~v~~~~~~~~ 198 (276)
T 2wa2_A 185 QGCGFCVKVLNPYS 198 (276)
T ss_dssp TTCEEEEEESCCCS
T ss_pred CCcEEEEEeCCCCc
Confidence 9 99998877543
No 153
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.41 E-value=5.5e-08 Score=78.33 Aligned_cols=71 Identities=15% Similarity=0.104 Sum_probs=51.9
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCC---CCCCCCccceeeecccccccCCh-hHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEH---LPFAENSVDLLISNLALHWVNNL-PGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~---l~~~~~~FD~Vis~~~l~~~~d~-~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.+.+.+....++++.++|+.+ +++.+++||+|++... .++. ..++.+++++|||||++++++
T Consensus 108 vD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~~~~---~~~~~~~~~~~~~~~LkpgG~l~i~~ 182 (233)
T 2ipx_A 108 VEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFADVA---QPDQTRIVALNAHTFLRNGGHFVISI 182 (233)
T ss_dssp ECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEECCC---CTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEEcCC---CccHHHHHHHHHHHHcCCCeEEEEEE
Confidence 699987655544432222579999999987 4555689999999655 2232 345889999999999999975
No 154
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=98.40 E-value=4.1e-08 Score=77.56 Aligned_cols=74 Identities=7% Similarity=-0.041 Sum_probs=59.6
Q ss_pred CcChHHHHHhhCCCCCC--CCceeEEEcCCCC-CCCCCCccceeeecccccccCChhHHHHHHHh--hhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPEDT--EVIYEKKFVDEEH-LPFAENSVDLLISNLALHWVNNLPGCFQQVLK--CLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~--~~~i~f~~~D~~~-l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r--~LkpGG~l~~~~~ 76 (245)
+|+|+.|++.|++++.. ..+++++++|+.+ ++..+++||+|+++..++ ..+...+++.+.+ +|+|||++++++.
T Consensus 83 vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~~~p~~-~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 83 IEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFVDPPFR-RGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEECCSSS-TTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEECCCCC-CCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 79999999999886531 2479999999977 566667999999987755 4577788888876 5999999998863
No 155
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=98.39 E-value=3.5e-07 Score=73.84 Aligned_cols=67 Identities=15% Similarity=0.094 Sum_probs=49.3
Q ss_pred CcChHHHH----HhhCCCCCCCCceeEEEcCCCCCCC---CCCccceeeecccccccCChhHHH-HHHHhhhcCCcEEEE
Q psy16312 2 CDNCESIL----SQAEPPEDTEVIYEKKFVDEEHLPF---AENSVDLLISNLALHWVNNLPGCF-QQVLKCLRQDGVFLA 73 (245)
Q Consensus 2 iD~S~~ml----~~A~~~~~~~~~i~f~~~D~~~l~~---~~~~FD~Vis~~~l~~~~d~~~~l-~~i~r~LkpGG~l~~ 73 (245)
+|+|+.|+ +.|+++ .|+.++++|+..... ..++||+|++..++ ++....+ ..+.++|||||+|++
T Consensus 107 vD~s~~~l~~l~~~a~~r----~nv~~i~~Da~~~~~~~~~~~~~D~I~~d~a~---~~~~~il~~~~~~~LkpGG~lvi 179 (232)
T 3id6_C 107 VEFSPRVVRELLLVAQRR----PNIFPLLADARFPQSYKSVVENVDVLYVDIAQ---PDQTDIAIYNAKFFLKVNGDMLL 179 (232)
T ss_dssp EECCHHHHHHHHHHHHHC----TTEEEEECCTTCGGGTTTTCCCEEEEEECCCC---TTHHHHHHHHHHHHEEEEEEEEE
T ss_pred EECcHHHHHHHHHHhhhc----CCeEEEEcccccchhhhccccceEEEEecCCC---hhHHHHHHHHHHHhCCCCeEEEE
Confidence 79999885 444433 479999999986431 24689999998764 4655555 455669999999999
Q ss_pred Ee
Q psy16312 74 SI 75 (245)
Q Consensus 74 ~~ 75 (245)
++
T Consensus 180 si 181 (232)
T 3id6_C 180 VI 181 (232)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 156
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.38 E-value=3.3e-07 Score=75.44 Aligned_cols=67 Identities=15% Similarity=0.075 Sum_probs=56.9
Q ss_pred CCcChHHHHHhhCCCCCC------CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEE
Q psy16312 1 MCDNCESILSQAEPPEDT------EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLAS 74 (245)
Q Consensus 1 ~iD~S~~ml~~A~~~~~~------~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~ 74 (245)
.+|+++.|++.|+++++. .++++++++|+.... ++||+|++. ..|+..++++++++|+|||++++.
T Consensus 99 ~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---~~fD~Ii~d-----~~dp~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 99 FVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---KKYDLIFCL-----QEPDIHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp EECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---CCEEEEEES-----SCCCHHHHHHHHTTEEEEEEEEEE
T ss_pred EEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---hhCCEEEEC-----CCChHHHHHHHHHhcCCCcEEEEE
Confidence 379999999999998753 357999999998765 789999986 347778999999999999999887
Q ss_pred e
Q psy16312 75 I 75 (245)
Q Consensus 75 ~ 75 (245)
.
T Consensus 171 ~ 171 (262)
T 2cmg_A 171 A 171 (262)
T ss_dssp E
T ss_pred c
Confidence 5
No 157
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.38 E-value=5e-07 Score=74.12 Aligned_cols=74 Identities=8% Similarity=-0.019 Sum_probs=57.8
Q ss_pred CcChHHHHHhhCCCCCC-----C-CceeEEEcCCCCC-------CCCCCccceeeeccccccc-----------------
Q psy16312 2 CDNCESILSQAEPPEDT-----E-VIYEKKFVDEEHL-------PFAENSVDLLISNLALHWV----------------- 51 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-----~-~~i~f~~~D~~~l-------~~~~~~FD~Vis~~~l~~~----------------- 51 (245)
+|+++.|++.|+++... . .+++++++|+.++ ++.+++||+|+|+-.+.+.
T Consensus 66 vDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~ 145 (260)
T 2ozv_A 66 YERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMT 145 (260)
T ss_dssp EESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTTCEEEEEECCCC--------------------
T ss_pred EECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcC
Confidence 79999999999986542 1 2599999999987 3556899999998433322
Q ss_pred -CChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 52 -NNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 52 -~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
.+...+++.+.++|||||++++..
T Consensus 146 ~~~~~~~l~~~~~~LkpgG~l~~~~ 170 (260)
T 2ozv_A 146 EGLFEDWIRTASAIMVSGGQLSLIS 170 (260)
T ss_dssp -CCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 246788999999999999998875
No 158
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.38 E-value=1.3e-07 Score=74.47 Aligned_cols=69 Identities=17% Similarity=0.086 Sum_probs=57.2
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|+++.. +..++++.++|+.+++ ++++||+|+++. +.++..++.+++++|+|||++++..
T Consensus 95 vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~D~i~~~~----~~~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 95 LDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFP-SEPPFDGVISRA----FASLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp EESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSC-CCSCEEEEECSC----SSSHHHHHHHHTTSEEEEEEEEEEE
T ss_pred EeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCC-ccCCcCEEEEec----cCCHHHHHHHHHHhcCCCcEEEEEe
Confidence 7999999999987543 2235999999999876 347899999864 3578899999999999999999874
No 159
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.36 E-value=8.9e-08 Score=80.92 Aligned_cols=69 Identities=12% Similarity=-0.008 Sum_probs=58.0
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+|+.|++.|+++.. +..+++++++|+.+.+..+++||+|++..+++++. +++.++|||||++++++.
T Consensus 106 vD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~~~~~~~~------~~~~~~LkpgG~lvi~~~ 176 (317)
T 1dl5_A 106 VEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVTVGVDEVP------ETWFTQLKEGGRVIVPIN 176 (317)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECSBBSCCC------HHHHHHEEEEEEEEEEBC
T ss_pred EECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEcCCHHHHH------HHHHHhcCCCcEEEEEEC
Confidence 7999999999988643 22469999999988655568899999999999986 578999999999999863
No 160
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.36 E-value=1.7e-09 Score=87.57 Aligned_cols=72 Identities=11% Similarity=-0.079 Sum_probs=61.4
Q ss_pred CcChHHHHHhhCCCCCC--C-CceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEE
Q psy16312 2 CDNCESILSQAEPPEDT--E-VIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLAS 74 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~--~-~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~ 74 (245)
+|+|+.|++.|++++.. . .+++|+++|+.+++ .+++||+|+++..+++..++...+.+++++|+|||.+++.
T Consensus 106 vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~ 180 (241)
T 3gdh_A 106 IDIDPVKIALARNNAEVYGIADKIEFICGDFLLLA-SFLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFR 180 (241)
T ss_dssp EESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHG-GGCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhc-ccCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHH
Confidence 79999999999886531 1 47999999999877 4589999999999999988888889999999999986544
No 161
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.36 E-value=1.6e-07 Score=76.49 Aligned_cols=68 Identities=19% Similarity=0.148 Sum_probs=56.6
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|++++. + ..++++.++|+.+. +++++||+|+++ .+++..+++++.++|+|||++++..
T Consensus 124 ~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 124 YEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEG-IEEENVDHVILD-----LPQPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp ECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGC-CCCCSEEEEEEC-----SSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred EecCHHHHHHHHHHHHHcCCCCceEEEECchhhc-cCCCCcCEEEEC-----CCCHHHHHHHHHHHcCCCCEEEEEE
Confidence 7999999999988653 1 13499999999854 566889999984 5688899999999999999998875
No 162
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.35 E-value=2.3e-07 Score=80.31 Aligned_cols=76 Identities=12% Similarity=0.110 Sum_probs=58.4
Q ss_pred CcChHHHHHhhCCCCCC-----CCceeEEEcCCCCCCCCCCccceeeecccccccC---C--hhHHHHHHHhhhcCCcEE
Q psy16312 2 CDNCESILSQAEPPEDT-----EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVN---N--LPGCFQQVLKCLRQDGVF 71 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-----~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~---d--~~~~l~~i~r~LkpGG~l 71 (245)
+|+|+.|++.|++++.. ..+++|.++|+.+ ++++++||+|+|+..+|+.. + ...++++++++|||||++
T Consensus 252 vD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l 330 (375)
T 4dcm_A 252 VDESPMAVASSRLNVETNMPEALDRCEFMINNALS-GVEPFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGEL 330 (375)
T ss_dssp EESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT-TCCTTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEE
T ss_pred EECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc-cCCCCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEE
Confidence 79999999999986542 1258899999987 45668999999999988642 2 236899999999999999
Q ss_pred EEEecCC
Q psy16312 72 LASIFGG 78 (245)
Q Consensus 72 ~~~~~~~ 78 (245)
++.....
T Consensus 331 ~iv~n~~ 337 (375)
T 4dcm_A 331 YIVANRH 337 (375)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 9876443
No 163
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.35 E-value=6.6e-08 Score=78.99 Aligned_cols=70 Identities=13% Similarity=0.001 Sum_probs=58.1
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCC---CCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFA---ENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~---~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|+++.. +..+++++++|+++++.. +++||+|+|+.+ .+...+++.+.++|||||++++..
T Consensus 110 vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~a~----~~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 110 VDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVARAV----APLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp EESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEESS----CCHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEECCc----CCHHHHHHHHHHHcCCCeEEEEEe
Confidence 7999999999998653 234699999999987653 479999999753 477899999999999999988764
No 164
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.35 E-value=1e-07 Score=73.16 Aligned_cols=91 Identities=9% Similarity=0.007 Sum_probs=70.9
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCC
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGE 79 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~ 79 (245)
+|+|+.|++.|+++.. +..++++.++|+.+ ++++++||+|+++.+ .++..++++++++ |||++++..+...
T Consensus 63 vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~-~~~~~~~D~i~~~~~----~~~~~~l~~~~~~--~gG~l~~~~~~~~ 135 (183)
T 2yxd_A 63 IDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED-VLDKLEFNKAFIGGT----KNIEKIIEILDKK--KINHIVANTIVLE 135 (183)
T ss_dssp EECSHHHHHHHHHHHHHTTCCSEEEEESCHHH-HGGGCCCSEEEECSC----SCHHHHHHHHHHT--TCCEEEEEESCHH
T ss_pred EeCCHHHHHHHHHHHHHcCCCcEEEEECCccc-cccCCCCcEEEECCc----ccHHHHHHHHhhC--CCCEEEEEecccc
Confidence 7999999999988653 12479999999987 666679999999887 6888999999999 9999999864321
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 80 TLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
. ...+.+.++++||.+..+.
T Consensus 136 ~----------------------------~~~~~~~l~~~g~~~~~~~ 155 (183)
T 2yxd_A 136 N----------------------------AAKIINEFESRGYNVDAVN 155 (183)
T ss_dssp H----------------------------HHHHHHHHHHTTCEEEEEE
T ss_pred c----------------------------HHHHHHHHHHcCCeEEEEE
Confidence 1 2345677888998765544
No 165
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.34 E-value=3.2e-07 Score=73.38 Aligned_cols=71 Identities=11% Similarity=0.086 Sum_probs=53.9
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCC---CCCCccceeeecccccccCChh-HHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLP---FAENSVDLLISNLALHWVNNLP-GCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~---~~~~~FD~Vis~~~l~~~~d~~-~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.+++++....++++.++|+.+.. ..+++||+|++... .++.. .++.+++++|||||++++..
T Consensus 104 vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~~~---~~~~~~~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 104 IEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFEDVA---QPTQAKILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp EESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEECCC---STTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEECCC---CHhHHHHHHHHHHHhcCCCCEEEEEE
Confidence 69999988887665543368999999998732 12368999998755 23443 44999999999999998873
No 166
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.34 E-value=5.2e-08 Score=75.37 Aligned_cols=71 Identities=11% Similarity=0.079 Sum_probs=56.9
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCCCCC-CccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLPFAE-NSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~~~~-~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+|+.|++.|++++. + ..++.+.++|+.+ ++++ ++||+|++..+++ +...+++++.++|+|||++++..+
T Consensus 61 ~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~-~~~~~~~~D~v~~~~~~~---~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 61 IDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE-ALCKIPDIDIAVVGGSGG---ELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp EESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH-HHTTSCCEEEEEESCCTT---CHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EECCHHHHHHHHHHHHHcCCCcceEEEecCHHH-hcccCCCCCEEEECCchH---HHHHHHHHHHHhcCCCcEEEEEec
Confidence 6999999999987542 1 1478999999876 2222 5899999987765 568999999999999999998863
No 167
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.34 E-value=6.1e-07 Score=70.19 Aligned_cols=64 Identities=8% Similarity=0.123 Sum_probs=50.2
Q ss_pred CceeEEEcCCCCCC-------------------------CCCCccceeeecccccccC----Chh-------HHHHHHHh
Q psy16312 20 VIYEKKFVDEEHLP-------------------------FAENSVDLLISNLALHWVN----NLP-------GCFQQVLK 63 (245)
Q Consensus 20 ~~i~f~~~D~~~l~-------------------------~~~~~FD~Vis~~~l~~~~----d~~-------~~l~~i~r 63 (245)
++++++++|+.+++ +++++||+|+|+.+++|.. |.. .+++++++
T Consensus 63 ~~v~~~~~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~ 142 (201)
T 2plw_A 63 PNVYFIQGEIGKDNMNNIKNINYIDNMNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQ 142 (201)
T ss_dssp TTCEEEECCTTTTSSCCC-----------CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEccccchhhhhhccccccccccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHH
Confidence 46899999999877 5667999999999888852 322 37899999
Q ss_pred hhcCCcEEEEEecCCCcHHH
Q psy16312 64 CLRQDGVFLASIFGGETLYE 83 (245)
Q Consensus 64 ~LkpGG~l~~~~~~~~~~~~ 83 (245)
+|||||+|++.++......+
T Consensus 143 ~LkpgG~lv~~~~~~~~~~~ 162 (201)
T 2plw_A 143 YINIGGTYIVKMYLGSQTNN 162 (201)
T ss_dssp HEEEEEEEEEEEECSTTHHH
T ss_pred HccCCCEEEEEEeCCCCHHH
Confidence 99999999998765544333
No 168
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.33 E-value=3.6e-07 Score=78.99 Aligned_cols=74 Identities=16% Similarity=0.029 Sum_probs=58.8
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCC-CCC-CCCccceeeecccccccCChhHHHHHHHhhhcCCcE-EEEEec
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEH-LPF-AENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGV-FLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~-l~~-~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~-l~~~~~ 76 (245)
+|+|+.|++.|++++. +..+++|+++|+.+ +|. .+++||+|+++..+++.. ...++++++++|||||+ +++++.
T Consensus 201 vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~~-~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 201 LDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPETLEA-IRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp ECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCSSHHH-HHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred EECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCCchHH-HHHHHHHHHHHcccCCeEEEEEEe
Confidence 7999999999998754 22279999999998 774 357899999987665543 57899999999999995 466653
No 169
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.33 E-value=1.4e-07 Score=74.82 Aligned_cols=70 Identities=11% Similarity=-0.020 Sum_probs=56.2
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+|+|+.|++.|+++.. +..++.+.++|+......+++||+|++..++++++ .++.++|||||++++.+..
T Consensus 108 vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~~~~~~------~~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 108 IERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTTAAGPKIP------EPLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp EESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEESSBBSSCC------HHHHHTEEEEEEEEEEESS
T ss_pred EeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEECCchHHHH------HHHHHHcCCCcEEEEEECC
Confidence 6999999999988643 12469999999854332357899999999999886 4889999999999988743
No 170
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.33 E-value=7.6e-08 Score=83.33 Aligned_cols=71 Identities=17% Similarity=0.214 Sum_probs=58.9
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCCCCCCccceeeeccccccc---CChhHHHHHHHhhhcCCcEEEEE
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLPFAENSVDLLISNLALHWV---NNLPGCFQQVLKCLRQDGVFLAS 74 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~---~d~~~~l~~i~r~LkpGG~l~~~ 74 (245)
+|+| .|++.|+++.. + ..+++++++|+++++++ ++||+|+|..+.+++ .++..++.+++++|||||+++++
T Consensus 92 vD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~ 168 (376)
T 3r0q_C 92 VEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP-EKVDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPS 168 (376)
T ss_dssp EESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS-SCEEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESS
T ss_pred EccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC-CcceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEe
Confidence 7999 99999987643 1 24599999999999887 899999997766665 45788999999999999998753
No 171
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.33 E-value=3.1e-07 Score=74.24 Aligned_cols=70 Identities=13% Similarity=-0.009 Sum_probs=57.6
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+|+|+.|++.|+++... ..++++.++|+.+..+.+++||+|+++ .+++..+++++.++|+|||++++...
T Consensus 119 vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~-----~~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 119 FEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVD-----VREPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEEC-----SSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred EecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEEC-----CcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 79999999999886421 257999999998865355789999984 45888999999999999999998863
No 172
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.32 E-value=3e-07 Score=77.47 Aligned_cols=77 Identities=13% Similarity=0.141 Sum_probs=60.0
Q ss_pred CCcChHHHHHhhCCCCCC--CCceeEEEcCCCCC--CCCCCccceeeecccccccCC----hhHHHHHHHhhhcCCcEEE
Q psy16312 1 MCDNCESILSQAEPPEDT--EVIYEKKFVDEEHL--PFAENSVDLLISNLALHWVNN----LPGCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 1 ~iD~S~~ml~~A~~~~~~--~~~i~f~~~D~~~l--~~~~~~FD~Vis~~~l~~~~d----~~~~l~~i~r~LkpGG~l~ 72 (245)
.||+++.|++.|+++++. .++++++++|+..+ .+.+++||+|++....++... ...++++++++|+|||+|+
T Consensus 118 ~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv 197 (317)
T 3gjy_A 118 VVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYV 197 (317)
T ss_dssp EEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEE
T ss_pred EEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEE
Confidence 379999999999987652 46899999999764 344689999999755443211 2578999999999999999
Q ss_pred EEecC
Q psy16312 73 ASIFG 77 (245)
Q Consensus 73 ~~~~~ 77 (245)
+....
T Consensus 198 ~~~~~ 202 (317)
T 3gjy_A 198 ANCGD 202 (317)
T ss_dssp EEEEE
T ss_pred EEecC
Confidence 87653
No 173
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.32 E-value=1.7e-07 Score=79.67 Aligned_cols=71 Identities=17% Similarity=0.134 Sum_probs=57.7
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCCCCCCccceeeeccc---ccccCChhHHHHHHHhhhcCCcEEEE
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLPFAENSVDLLISNLA---LHWVNNLPGCFQQVLKCLRQDGVFLA 73 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~---l~~~~d~~~~l~~i~r~LkpGG~l~~ 73 (245)
+|+| .|++.|+++.. + ..+++++++|++++++++++||+|+|... +.+..++..++.++.++|||||+++.
T Consensus 67 vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~ 143 (328)
T 1g6q_1 67 VDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFP 143 (328)
T ss_dssp EESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEES
T ss_pred EChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEE
Confidence 6899 59999887542 1 24699999999999887789999999854 44456688999999999999999873
No 174
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=98.32 E-value=2.7e-07 Score=77.97 Aligned_cols=75 Identities=13% Similarity=0.075 Sum_probs=56.4
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCCCccceeeecc------cccccCC----------------hhHH
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAENSVDLLISNL------ALHWVNN----------------LPGC 57 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~~~FD~Vis~~------~l~~~~d----------------~~~~ 57 (245)
+|+|+.|++.+++++. +..++.++++|+..++..+++||+|++.. +++..++ ...+
T Consensus 149 vD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~ 228 (315)
T 1ixk_A 149 FDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRL 228 (315)
T ss_dssp ECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHH
Confidence 7999999999988653 22479999999998765457899999842 2222221 1488
Q ss_pred HHHHHhhhcCCcEEEEEec
Q psy16312 58 FQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 58 l~~i~r~LkpGG~l~~~~~ 76 (245)
|++++++|||||++++++.
T Consensus 229 L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 229 LEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp HHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHhCCCCCEEEEEeC
Confidence 9999999999999998764
No 175
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.31 E-value=1.8e-07 Score=78.24 Aligned_cols=75 Identities=15% Similarity=0.214 Sum_probs=55.1
Q ss_pred CCcChHHHHHhhCCCCC-------CCCceeEEEcCCCCC-CCCCCccceeeecccccccCCh----hHHHHHHHhhhcCC
Q psy16312 1 MCDNCESILSQAEPPED-------TEVIYEKKFVDEEHL-PFAENSVDLLISNLALHWVNNL----PGCFQQVLKCLRQD 68 (245)
Q Consensus 1 ~iD~S~~ml~~A~~~~~-------~~~~i~f~~~D~~~l-~~~~~~FD~Vis~~~l~~~~d~----~~~l~~i~r~LkpG 68 (245)
.+|+|+.|++.|+++++ ..++++++++|+... +..+++||+|++....++.+.. ..++++++++|+||
T Consensus 112 ~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~Lkpg 191 (294)
T 3adn_A 112 MVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPG 191 (294)
T ss_dssp EECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEEECC----------CCHHHHHHHHHTEEEE
T ss_pred EEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEEECCCCccCcchhccHHHHHHHHHHhcCCC
Confidence 37999999999998653 136899999998764 4446899999997665544332 67999999999999
Q ss_pred cEEEEEe
Q psy16312 69 GVFLASI 75 (245)
Q Consensus 69 G~l~~~~ 75 (245)
|++++..
T Consensus 192 G~lv~~~ 198 (294)
T 3adn_A 192 GIFVAQN 198 (294)
T ss_dssp EEEEEEE
T ss_pred CEEEEec
Confidence 9999875
No 176
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.31 E-value=1.9e-08 Score=78.33 Aligned_cols=71 Identities=8% Similarity=0.068 Sum_probs=55.8
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEE
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLA 73 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~ 73 (245)
+|+|+.|++.|++++.. +....+.++|....+ +.++||+|++..++|++++...++.++++.|+|||.|+-
T Consensus 79 ~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~~-~~~~~DvVLa~k~LHlL~~~~~al~~v~~~L~pggvfIS 150 (200)
T 3fzg_A 79 YDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDV-YKGTYDVVFLLKMLPVLKQQDVNILDFLQLFHTQNFVIS 150 (200)
T ss_dssp ECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHH-TTSEEEEEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEE
T ss_pred EeCCHHHHHHHHHHHHhcCCCccEEEecccccC-CCCCcChhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEE
Confidence 79999999999987642 122233446665443 458899999999999998888889999999999998763
No 177
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.31 E-value=3.1e-07 Score=74.74 Aligned_cols=52 Identities=13% Similarity=0.157 Sum_probs=41.0
Q ss_pred EEEcCCCCCCC-----CCCccceeeecccccccCC---------hhHHHHHHHhhhcCCcEEEEEe
Q psy16312 24 KKFVDEEHLPF-----AENSVDLLISNLALHWVNN---------LPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 24 f~~~D~~~l~~-----~~~~FD~Vis~~~l~~~~d---------~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
|.++|+.+... ..++||+|+|+..++...+ ...++++++++|+|||+++++.
T Consensus 149 ~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 214 (250)
T 1o9g_A 149 IRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHAVIAVTD 214 (250)
T ss_dssp EEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred eeecccccccccccccCCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCcEEEEeC
Confidence 99999987431 3358999999877666544 3489999999999999999853
No 178
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.30 E-value=7.1e-08 Score=77.09 Aligned_cols=73 Identities=10% Similarity=-0.011 Sum_probs=57.7
Q ss_pred CcChHHHHHhhCCCCC---CCCceeEEEcCCCC-CCCC-----CCccceeeecccccccCChhHHHHHHHhhhcCCcEEE
Q psy16312 2 CDNCESILSQAEPPED---TEVIYEKKFVDEEH-LPFA-----ENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~---~~~~i~f~~~D~~~-l~~~-----~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~ 72 (245)
+|+|+.|++.|++++. ...+++++++|+.+ ++.. .++||+|++....++..+....+..+ ++|||||+++
T Consensus 89 vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~LkpgG~lv 167 (221)
T 3u81_A 89 MEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKGTVLL 167 (221)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTTCEEE
T ss_pred EeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCCeEEE
Confidence 7999999999998643 12469999999855 3322 26899999998888776666778887 9999999999
Q ss_pred EEe
Q psy16312 73 ASI 75 (245)
Q Consensus 73 ~~~ 75 (245)
+..
T Consensus 168 ~~~ 170 (221)
T 3u81_A 168 ADN 170 (221)
T ss_dssp ESC
T ss_pred EeC
Confidence 874
No 179
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.29 E-value=3.9e-08 Score=75.63 Aligned_cols=76 Identities=7% Similarity=0.031 Sum_probs=58.4
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCC-CCCCCCccceeeecccccccCChhHHHHHHH--hhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEH-LPFAENSVDLLISNLALHWVNNLPGCFQQVL--KCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~-l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~--r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|++++.. ..+++++++|+.+ ++..+++||+|+++..+++ .+....++.+. ++|+|||++++.+
T Consensus 60 vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~~~~~~~-~~~~~~~~~l~~~~~L~~gG~l~~~~ 138 (177)
T 2esr_A 60 VEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFLDPPYAK-ETIVATIEALAAKNLLSEQVMVVCET 138 (177)
T ss_dssp ECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEECCSSHH-HHHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEECCCCCc-chHHHHHHHHHhCCCcCCCcEEEEEE
Confidence 79999999999886532 1469999999987 4443467999999876543 34567777777 9999999999987
Q ss_pred cCC
Q psy16312 76 FGG 78 (245)
Q Consensus 76 ~~~ 78 (245)
...
T Consensus 139 ~~~ 141 (177)
T 2esr_A 139 DKT 141 (177)
T ss_dssp ETT
T ss_pred CCc
Confidence 544
No 180
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=98.28 E-value=1.1e-06 Score=72.95 Aligned_cols=74 Identities=14% Similarity=0.063 Sum_probs=58.1
Q ss_pred CcC-hHHHHHhhCCCC-----CCC-------CceeEEEcCCCCCC--C----CCCccceeeecccccccCChhHHHHHHH
Q psy16312 2 CDN-CESILSQAEPPE-----DTE-------VIYEKKFVDEEHLP--F----AENSVDLLISNLALHWVNNLPGCFQQVL 62 (245)
Q Consensus 2 iD~-S~~ml~~A~~~~-----~~~-------~~i~f~~~D~~~l~--~----~~~~FD~Vis~~~l~~~~d~~~~l~~i~ 62 (245)
+|+ |+.|++.|++++ ... .++.+...|..+.. + .+++||+|++..++++.++...+++.+.
T Consensus 108 ~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~ 187 (281)
T 3bzb_A 108 TDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQAHDALLRSVK 187 (281)
T ss_dssp EECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGGHHHHHHHHH
T ss_pred EeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHhhccCCCCCEEEEeCcccChHHHHHHHHHHH
Confidence 799 899999998765 211 26788876654421 1 3578999999999999999999999999
Q ss_pred hhhc---C--CcEEEEEe
Q psy16312 63 KCLR---Q--DGVFLASI 75 (245)
Q Consensus 63 r~Lk---p--GG~l~~~~ 75 (245)
++|+ | ||++++..
T Consensus 188 ~~Lk~~~p~~gG~l~v~~ 205 (281)
T 3bzb_A 188 MLLALPANDPTAVALVTF 205 (281)
T ss_dssp HHBCCTTTCTTCEEEEEE
T ss_pred HHhcccCCCCCCEEEEEE
Confidence 9999 9 99887764
No 181
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=98.27 E-value=1.8e-07 Score=74.77 Aligned_cols=69 Identities=13% Similarity=0.041 Sum_probs=56.5
Q ss_pred CcChHHHHHhhCCCCCC-------CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEE
Q psy16312 2 CDNCESILSQAEPPEDT-------EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLAS 74 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-------~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~ 74 (245)
+|+|+.|++.|+++... ..++.+.++|+...+..+++||+|++...++++ +.+++++|||||+++++
T Consensus 108 vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~~~~------~~~~~~~LkpgG~lv~~ 181 (226)
T 1i1n_A 108 IDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAIHVGAAAPVV------PQALIDQLKPGGRLILP 181 (226)
T ss_dssp EESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEEEECSBBSSC------CHHHHHTEEEEEEEEEE
T ss_pred EeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEEEECCchHHH------HHHHHHhcCCCcEEEEE
Confidence 79999999999876432 247999999998766556789999999887655 36889999999999998
Q ss_pred ec
Q psy16312 75 IF 76 (245)
Q Consensus 75 ~~ 76 (245)
+.
T Consensus 182 ~~ 183 (226)
T 1i1n_A 182 VG 183 (226)
T ss_dssp ES
T ss_pred Ee
Confidence 64
No 182
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=98.27 E-value=1.5e-07 Score=75.49 Aligned_cols=69 Identities=7% Similarity=0.036 Sum_probs=56.9
Q ss_pred CcChHHHHHhhCCCCCC-------CCceeEEEcCCCCCCCCC-CccceeeecccccccCChhHHHHHHHhhhcCCcEEEE
Q psy16312 2 CDNCESILSQAEPPEDT-------EVIYEKKFVDEEHLPFAE-NSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLA 73 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-------~~~i~f~~~D~~~l~~~~-~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~ 73 (245)
+|+|+.|++.|+++... ..++++.++|+.. ++++ ++||+|++..+++++. +++.++|||||++++
T Consensus 120 vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~-~~~~~~~fD~I~~~~~~~~~~------~~~~~~LkpgG~lvi 192 (227)
T 1r18_A 120 IEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRK-GYPPNAPYNAIHVGAAAPDTP------TELINQLASGGRLIV 192 (227)
T ss_dssp EESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGG-CCGGGCSEEEEEECSCBSSCC------HHHHHTEEEEEEEEE
T ss_pred EEcCHHHHHHHHHHHHhcCccccCCCceEEEECCccc-CCCcCCCccEEEECCchHHHH------HHHHHHhcCCCEEEE
Confidence 69999999999886532 2479999999987 4433 7899999999998874 789999999999999
Q ss_pred EecC
Q psy16312 74 SIFG 77 (245)
Q Consensus 74 ~~~~ 77 (245)
.+..
T Consensus 193 ~~~~ 196 (227)
T 1r18_A 193 PVGP 196 (227)
T ss_dssp EESC
T ss_pred EEec
Confidence 8754
No 183
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.26 E-value=6.4e-08 Score=74.80 Aligned_cols=76 Identities=9% Similarity=0.078 Sum_probs=59.6
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCC----CCCCccceeeecccccccCChhHHHHHH--HhhhcCCcEEE
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLP----FAENSVDLLISNLALHWVNNLPGCFQQV--LKCLRQDGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~----~~~~~FD~Vis~~~l~~~~d~~~~l~~i--~r~LkpGG~l~ 72 (245)
+|+|+.|++.|++++.. ..+++++++|+.+.. ..+++||+|+++..++ ..+....+..+ .++|+|||+++
T Consensus 73 vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~~~~~~-~~~~~~~~~~l~~~~~L~~gG~l~ 151 (187)
T 2fhp_A 73 IEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVLLDPPYA-KQEIVSQLEKMLERQLLTNEAVIV 151 (187)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCGG-GCCHHHHHHHHHHTTCEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEEECCCCC-chhHHHHHHHHHHhcccCCCCEEE
Confidence 79999999999886531 247999999997632 2257899999987754 44677888888 89999999999
Q ss_pred EEecCC
Q psy16312 73 ASIFGG 78 (245)
Q Consensus 73 ~~~~~~ 78 (245)
+.+...
T Consensus 152 ~~~~~~ 157 (187)
T 2fhp_A 152 CETDKT 157 (187)
T ss_dssp EEEETT
T ss_pred EEeCCc
Confidence 886443
No 184
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.25 E-value=2.4e-08 Score=76.07 Aligned_cols=75 Identities=8% Similarity=0.060 Sum_probs=59.0
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCC-C-C--CCCccceeeecccccccCChhHHHHHHH--hhhcCCcEEEEE
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHL-P-F--AENSVDLLISNLALHWVNNLPGCFQQVL--KCLRQDGVFLAS 74 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l-~-~--~~~~FD~Vis~~~l~~~~d~~~~l~~i~--r~LkpGG~l~~~ 74 (245)
+|+|+.|++.|+++... ..++++.++|+.+. + . .+++||+|+++..++ .+...+++.+. ++|+|||+++++
T Consensus 69 vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~~~~~~--~~~~~~~~~~~~~~~L~~gG~~~~~ 146 (171)
T 1ws6_A 69 VEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFMAPPYA--MDLAALFGELLASGLVEAGGLYVLQ 146 (171)
T ss_dssp ECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEECCCTT--SCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred EeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEECCCCc--hhHHHHHHHHHhhcccCCCcEEEEE
Confidence 79999999999986542 12789999998763 2 1 124899999998776 67778888888 999999999998
Q ss_pred ecCC
Q psy16312 75 IFGG 78 (245)
Q Consensus 75 ~~~~ 78 (245)
+...
T Consensus 147 ~~~~ 150 (171)
T 1ws6_A 147 HPKD 150 (171)
T ss_dssp EETT
T ss_pred eCCc
Confidence 7544
No 185
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.25 E-value=8.3e-07 Score=74.61 Aligned_cols=57 Identities=12% Similarity=0.130 Sum_probs=45.5
Q ss_pred CceeEEEc-CCCCCCCCCCccceeeecccc---cccCChh---HHHHHHHhhhcCCcEEEEEecCC
Q psy16312 20 VIYEKKFV-DEEHLPFAENSVDLLISNLAL---HWVNNLP---GCFQQVLKCLRQDGVFLASIFGG 78 (245)
Q Consensus 20 ~~i~f~~~-D~~~l~~~~~~FD~Vis~~~l---~~~~d~~---~~l~~i~r~LkpGG~l~~~~~~~ 78 (245)
+++.|+++ |+..++ +++||+|+|..++ +|..|.. .+|..+.++|||||.|++.++.+
T Consensus 131 ~~v~~~~~~D~~~l~--~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~kv~~~ 194 (305)
T 2p41_A 131 NLVRLQSGVDVFFIP--PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVKVLNP 194 (305)
T ss_dssp GGEEEECSCCTTTSC--CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEEESCC
T ss_pred CCeEEEeccccccCC--cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 57999999 888776 4689999998765 3443433 57899999999999999988765
No 186
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.24 E-value=3.2e-07 Score=75.87 Aligned_cols=68 Identities=21% Similarity=0.173 Sum_probs=57.1
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|++++.. ..++.+.++|+.+. +++++||+|+++ .+++..++.++.++|+|||++++..
T Consensus 143 vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~~~~D~V~~~-----~~~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 143 YEKREEFAKLAESNLTKWGLIERVTIKVRDISEG-FDEKDVDALFLD-----VPDPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp ECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC-CSCCSEEEEEEC-----CSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc-ccCCccCEEEEC-----CcCHHHHHHHHHHHcCCCCEEEEEe
Confidence 69999999999886431 14799999999876 556789999984 4688899999999999999999886
No 187
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.23 E-value=5.4e-07 Score=72.89 Aligned_cols=69 Identities=14% Similarity=0.029 Sum_probs=55.5
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCC---CCCC-CccceeeecccccccCChhHHHHHHHh-hhcCCcEEEEEec
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHL---PFAE-NSVDLLISNLALHWVNNLPGCFQQVLK-CLRQDGVFLASIF 76 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l---~~~~-~~FD~Vis~~~l~~~~d~~~~l~~i~r-~LkpGG~l~~~~~ 76 (245)
+|+|+.|++.|+.. ..+++++++|+.++ +..+ .+||+|++... | .+...++.++++ +|||||++++...
T Consensus 115 vD~s~~~l~~a~~~---~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~d~~-~--~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 115 IDRDLSRCQIPASD---MENITLHQGDCSDLTTFEHLREMAHPLIFIDNA-H--ANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp EESCCTTCCCCGGG---CTTEEEEECCSSCSGGGGGGSSSCSSEEEEESS-C--SSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred EeCChHHHHHHhcc---CCceEEEECcchhHHHHHhhccCCCCEEEECCc-h--HhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 79999999988732 25799999999884 5433 47999998665 3 378889999997 9999999999753
No 188
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.22 E-value=1.6e-07 Score=79.26 Aligned_cols=75 Identities=19% Similarity=0.116 Sum_probs=59.6
Q ss_pred CCcChHHHHHhhCCCCCC-------CCceeEEEcCCCC-CCCCCCccceeeecccccc-cCC------hhHHHHHHHhhh
Q psy16312 1 MCDNCESILSQAEPPEDT-------EVIYEKKFVDEEH-LPFAENSVDLLISNLALHW-VNN------LPGCFQQVLKCL 65 (245)
Q Consensus 1 ~iD~S~~ml~~A~~~~~~-------~~~i~f~~~D~~~-l~~~~~~FD~Vis~~~l~~-~~d------~~~~l~~i~r~L 65 (245)
.+|+|+.|++.|+++++. .++++++++|+.. ++..+++||+|++....++ ... ...++++++++|
T Consensus 106 ~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~L 185 (314)
T 1uir_A 106 MVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHL 185 (314)
T ss_dssp EEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTE
T ss_pred EEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEEECCCCcccccCcchhccHHHHHHHHHHhc
Confidence 379999999999986531 3689999999976 3444688999999887766 112 358899999999
Q ss_pred cCCcEEEEEe
Q psy16312 66 RQDGVFLASI 75 (245)
Q Consensus 66 kpGG~l~~~~ 75 (245)
+|||++++..
T Consensus 186 kpgG~lv~~~ 195 (314)
T 1uir_A 186 NPGGVMGMQT 195 (314)
T ss_dssp EEEEEEEEEE
T ss_pred CCCcEEEEEc
Confidence 9999998874
No 189
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.22 E-value=6.8e-07 Score=72.57 Aligned_cols=74 Identities=9% Similarity=0.009 Sum_probs=55.3
Q ss_pred CcChHHHHHhhCCCCC----------CCCceeEEEcCCCC-CC--CCCCccceeeecccccccCCh--------hHHHHH
Q psy16312 2 CDNCESILSQAEPPED----------TEVIYEKKFVDEEH-LP--FAENSVDLLISNLALHWVNNL--------PGCFQQ 60 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~----------~~~~i~f~~~D~~~-l~--~~~~~FD~Vis~~~l~~~~d~--------~~~l~~ 60 (245)
+|+|+.|++.|++++. +..++.++++|+.+ ++ +..++||.|+..+.-.|.... ..++.+
T Consensus 79 vD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~ 158 (246)
T 2vdv_E 79 MEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSE 158 (246)
T ss_dssp EESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTCEEEEEEESCCCC------CSSCCCHHHHHH
T ss_pred EEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccccCEEEEECCCcccccchhHHhhccHHHHHH
Confidence 7999999999876431 22579999999987 66 667899999865432222110 489999
Q ss_pred HHhhhcCCcEEEEEe
Q psy16312 61 VLKCLRQDGVFLASI 75 (245)
Q Consensus 61 i~r~LkpGG~l~~~~ 75 (245)
+.++|+|||+|++.+
T Consensus 159 ~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 159 YAYVLKEGGVVYTIT 173 (246)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHHHcCCCCEEEEEe
Confidence 999999999999875
No 190
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.21 E-value=4.1e-07 Score=77.97 Aligned_cols=75 Identities=19% Similarity=0.013 Sum_probs=59.6
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCCCccceeeecccccccC--------ChhHHHHHHHhhhcCCcEE
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVN--------NLPGCFQQVLKCLRQDGVF 71 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~--------d~~~~l~~i~r~LkpGG~l 71 (245)
+|+|+.|++.|++++. +..+++|.++|+.+++.+.+.||+|+++-...+.. ....++++++++|||||++
T Consensus 234 ~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l 313 (354)
T 3tma_A 234 GDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRV 313 (354)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEE
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEE
Confidence 6999999999998653 22379999999999887777899999975544321 1367899999999999999
Q ss_pred EEEec
Q psy16312 72 LASIF 76 (245)
Q Consensus 72 ~~~~~ 76 (245)
++.+.
T Consensus 314 ~i~t~ 318 (354)
T 3tma_A 314 ALLTL 318 (354)
T ss_dssp EEEES
T ss_pred EEEeC
Confidence 98863
No 191
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.19 E-value=1.9e-07 Score=75.26 Aligned_cols=71 Identities=10% Similarity=0.078 Sum_probs=57.2
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCC-C-CCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHL-P-FAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l-~-~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|++++. + ..+++|+++|+.+. + ..+++||+|++.. +..+...+++++.++|||||++++..
T Consensus 101 vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~~~---~~~~~~~~l~~~~~~LkpgG~lv~d~ 176 (232)
T 3ntv_A 101 IERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFIDA---AKAQSKKFFEIYTPLLKHQGLVITDN 176 (232)
T ss_dssp EECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEEET---TSSSHHHHHHHHGGGEEEEEEEEEEC
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEEcC---cHHHHHHHHHHHHHhcCCCeEEEEee
Confidence 7999999999998653 1 24799999999764 4 3358999999764 35567889999999999999998853
No 192
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.18 E-value=2.4e-07 Score=78.27 Aligned_cols=75 Identities=16% Similarity=0.158 Sum_probs=54.8
Q ss_pred CCcChHHHHHhhCCCCCC------CCceeEEEcCCCC-CCCCCCccceeeecccccccCCh----hHHHHHHHhhhcCCc
Q psy16312 1 MCDNCESILSQAEPPEDT------EVIYEKKFVDEEH-LPFAENSVDLLISNLALHWVNNL----PGCFQQVLKCLRQDG 69 (245)
Q Consensus 1 ~iD~S~~ml~~A~~~~~~------~~~i~f~~~D~~~-l~~~~~~FD~Vis~~~l~~~~d~----~~~l~~i~r~LkpGG 69 (245)
.+|+|+.|++.|+++++. .++++++++|+.. ++..+++||+|++...-++-+.. ..++++++++|+|||
T Consensus 137 ~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG 216 (314)
T 2b2c_A 137 MCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDG 216 (314)
T ss_dssp EECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEECCC-------------HHHHHHHHEEEEE
T ss_pred EEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCe
Confidence 379999999999987642 3679999999876 33345789999987654433222 578999999999999
Q ss_pred EEEEEe
Q psy16312 70 VFLASI 75 (245)
Q Consensus 70 ~l~~~~ 75 (245)
++++..
T Consensus 217 ~lv~~~ 222 (314)
T 2b2c_A 217 ILSSQG 222 (314)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 999875
No 193
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.17 E-value=3.6e-07 Score=77.42 Aligned_cols=76 Identities=13% Similarity=0.184 Sum_probs=57.8
Q ss_pred CCcChHHHHHhhCCCCCC------CCceeEEEcCCCC-CCCCCCccceeeecccccccC--C--hhHHHHHHHhhhcCCc
Q psy16312 1 MCDNCESILSQAEPPEDT------EVIYEKKFVDEEH-LPFAENSVDLLISNLALHWVN--N--LPGCFQQVLKCLRQDG 69 (245)
Q Consensus 1 ~iD~S~~ml~~A~~~~~~------~~~i~f~~~D~~~-l~~~~~~FD~Vis~~~l~~~~--d--~~~~l~~i~r~LkpGG 69 (245)
.+|+|+.|++.|+++++. .++++++++|+.+ ++..+++||+|++...-++-+ . ...++++++++|+|||
T Consensus 145 ~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG 224 (321)
T 2pt6_A 145 ICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNG 224 (321)
T ss_dssp EEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEE
T ss_pred EEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCc
Confidence 379999999999987653 3679999999865 333357899999876433321 1 1688999999999999
Q ss_pred EEEEEec
Q psy16312 70 VFLASIF 76 (245)
Q Consensus 70 ~l~~~~~ 76 (245)
++++...
T Consensus 225 ~lv~~~~ 231 (321)
T 2pt6_A 225 YCVAQCE 231 (321)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 9998753
No 194
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.17 E-value=3.3e-07 Score=73.85 Aligned_cols=69 Identities=10% Similarity=0.109 Sum_probs=54.7
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCC-CccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAE-NSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~-~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+|+|+.|++.|+++.. +..++.+.++|+ ..++++ ..||+|++..+++++.+ ++.++|+|||++++.+..
T Consensus 120 vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~-~~~~~~~~~fD~Ii~~~~~~~~~~------~~~~~L~pgG~lvi~~~~ 191 (235)
T 1jg1_A 120 IERIPELVEFAKRNLERAGVKNVHVILGDG-SKGFPPKAPYDVIIVTAGAPKIPE------PLIEQLKIGGKLIIPVGS 191 (235)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSEEEEESCG-GGCCGGGCCEEEEEECSBBSSCCH------HHHHTEEEEEEEEEEECS
T ss_pred EeCCHHHHHHHHHHHHHcCCCCcEEEECCc-ccCCCCCCCccEEEECCcHHHHHH------HHHHhcCCCcEEEEEEec
Confidence 6999999999988643 224699999997 444443 35999999999988753 789999999999998743
No 195
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.17 E-value=2.2e-07 Score=78.16 Aligned_cols=75 Identities=13% Similarity=0.158 Sum_probs=56.1
Q ss_pred CCcChHHHHHhhCCCCCC------CCceeEEEcCCCC-CCCCCCccceeeecccccccCC----hhHHHHHHHhhhcCCc
Q psy16312 1 MCDNCESILSQAEPPEDT------EVIYEKKFVDEEH-LPFAENSVDLLISNLALHWVNN----LPGCFQQVLKCLRQDG 69 (245)
Q Consensus 1 ~iD~S~~ml~~A~~~~~~------~~~i~f~~~D~~~-l~~~~~~FD~Vis~~~l~~~~d----~~~~l~~i~r~LkpGG 69 (245)
.+|+|+.|++.|+++++. .++++++++|+.+ ++..+++||+|++....++.+. ...++++++++|+|||
T Consensus 124 ~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG 203 (304)
T 2o07_A 124 QCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDG 203 (304)
T ss_dssp EEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEEEECC-----------CHHHHHHHHHEEEEE
T ss_pred EEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCe
Confidence 379999999999987642 3679999999875 3444588999999766544321 2468999999999999
Q ss_pred EEEEEe
Q psy16312 70 VFLASI 75 (245)
Q Consensus 70 ~l~~~~ 75 (245)
++++..
T Consensus 204 ~lv~~~ 209 (304)
T 2o07_A 204 VLCCQG 209 (304)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 999875
No 196
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.17 E-value=1.2e-06 Score=73.02 Aligned_cols=56 Identities=18% Similarity=0.049 Sum_probs=44.2
Q ss_pred ceeE-EEcCCCCCCCCCCccceeeeccccccc----C-------ChhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 21 IYEK-KFVDEEHLPFAENSVDLLISNLALHWV----N-------NLPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 21 ~i~f-~~~D~~~l~~~~~~FD~Vis~~~l~~~----~-------d~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+++| +++|+.++++. ++||+|+|+...++. . ....++++++++|||||+|++..+.
T Consensus 106 ~v~~~i~gD~~~~~~~-~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~~~ 173 (290)
T 2xyq_A 106 DADSTLIGDCATVHTA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 173 (290)
T ss_dssp SSSEEEESCGGGCCCS-SCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred CCEEEEECccccCCcc-CcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence 6889 99999998875 789999998654431 1 1247899999999999999997643
No 197
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.16 E-value=3.8e-07 Score=77.61 Aligned_cols=75 Identities=20% Similarity=0.168 Sum_probs=57.6
Q ss_pred CCcChHHHHHhhCCCCCC------CCceeEEEcCCCCC--CCCCCccceeeeccccccc--CC--hhHHHHHHHhhhcCC
Q psy16312 1 MCDNCESILSQAEPPEDT------EVIYEKKFVDEEHL--PFAENSVDLLISNLALHWV--NN--LPGCFQQVLKCLRQD 68 (245)
Q Consensus 1 ~iD~S~~ml~~A~~~~~~------~~~i~f~~~D~~~l--~~~~~~FD~Vis~~~l~~~--~d--~~~~l~~i~r~LkpG 68 (245)
.+|+|+.|++.|+++++. .++++++++|+.+. .+.+++||+|++.....+. .+ ...++++++++|+||
T Consensus 149 ~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~Lkpg 228 (334)
T 1xj5_A 149 MCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPG 228 (334)
T ss_dssp EEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEE
T ss_pred EEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEEEECCCCccCcchhhhHHHHHHHHHHhcCCC
Confidence 379999999999987641 35799999998764 2345789999997653222 11 358999999999999
Q ss_pred cEEEEEe
Q psy16312 69 GVFLASI 75 (245)
Q Consensus 69 G~l~~~~ 75 (245)
|++++..
T Consensus 229 G~lv~~~ 235 (334)
T 1xj5_A 229 GVVCTQA 235 (334)
T ss_dssp EEEEEEC
T ss_pred cEEEEec
Confidence 9999873
No 198
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.16 E-value=3.5e-07 Score=76.58 Aligned_cols=76 Identities=17% Similarity=0.192 Sum_probs=56.3
Q ss_pred CCcChHHHHHhhCCCCCC------CCceeEEEcCCCC-CCCCCCccceeeecccccccC-----ChhHHHHHHHhhhcCC
Q psy16312 1 MCDNCESILSQAEPPEDT------EVIYEKKFVDEEH-LPFAENSVDLLISNLALHWVN-----NLPGCFQQVLKCLRQD 68 (245)
Q Consensus 1 ~iD~S~~ml~~A~~~~~~------~~~i~f~~~D~~~-l~~~~~~FD~Vis~~~l~~~~-----d~~~~l~~i~r~LkpG 68 (245)
.+|+|+.|++.|+++++. .++++++++|+.. ++..+++||+|++...-+|+. ....++++++++|+||
T Consensus 119 ~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~Lkpg 198 (296)
T 1inl_A 119 LCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKED 198 (296)
T ss_dssp EEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEEEC----------CCSHHHHHHHHHHEEEE
T ss_pred EEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCC
Confidence 379999999999987631 3679999999865 344457899999865444332 2268899999999999
Q ss_pred cEEEEEec
Q psy16312 69 GVFLASIF 76 (245)
Q Consensus 69 G~l~~~~~ 76 (245)
|++++...
T Consensus 199 G~lv~~~~ 206 (296)
T 1inl_A 199 GVFSAETE 206 (296)
T ss_dssp EEEEEECC
T ss_pred cEEEEEcc
Confidence 99998853
No 199
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.16 E-value=8.1e-07 Score=73.41 Aligned_cols=71 Identities=8% Similarity=0.030 Sum_probs=59.0
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+|+|+.|++.|++++. +..++.|+++|+.+++. .++||+|++.... +....+.++.++|+|||+++++++.
T Consensus 149 vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~-~~~~D~Vi~d~p~----~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 149 IEKNPTAYHYLCENIKLNKLNNVIPILADNRDVEL-KDVADRVIMGYVH----KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp EECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCC-TTCEEEEEECCCS----SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred EeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCc-cCCceEEEECCcc----cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 7999999999988653 22478899999998844 5789999987654 6778999999999999999988754
No 200
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.16 E-value=3.3e-07 Score=76.24 Aligned_cols=76 Identities=12% Similarity=0.173 Sum_probs=59.0
Q ss_pred CCcChHHHHHhhCCCCCC------CCceeEEEcCCCCC-CCCCCccceeeecccccccCCh----hHHHHHHHhhhcCCc
Q psy16312 1 MCDNCESILSQAEPPEDT------EVIYEKKFVDEEHL-PFAENSVDLLISNLALHWVNNL----PGCFQQVLKCLRQDG 69 (245)
Q Consensus 1 ~iD~S~~ml~~A~~~~~~------~~~i~f~~~D~~~l-~~~~~~FD~Vis~~~l~~~~d~----~~~l~~i~r~LkpGG 69 (245)
.+|+++.|++.|+++++. .++++++++|+... +..+++||+|++....++.+.. ..++++++++|+|||
T Consensus 107 ~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG 186 (283)
T 2i7c_A 107 ICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNG 186 (283)
T ss_dssp EEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEE
T ss_pred EEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCc
Confidence 379999999999987652 36899999998763 3235789999997655443322 589999999999999
Q ss_pred EEEEEec
Q psy16312 70 VFLASIF 76 (245)
Q Consensus 70 ~l~~~~~ 76 (245)
++++...
T Consensus 187 ~lv~~~~ 193 (283)
T 2i7c_A 187 YCVAQCE 193 (283)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 9998853
No 201
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.16 E-value=4.9e-07 Score=72.43 Aligned_cols=70 Identities=14% Similarity=0.120 Sum_probs=56.4
Q ss_pred CcChHHHHHhhCCCCC---CC-CceeEEEcCCCCC-C-CCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEE
Q psy16312 2 CDNCESILSQAEPPED---TE-VIYEKKFVDEEHL-P-FAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLAS 74 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~---~~-~~i~f~~~D~~~l-~-~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~ 74 (245)
+|+|+.|++.|++++. .. .+++++++|+.++ + +.+++||+|++... ..+....++++.++|||||++++.
T Consensus 87 vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~d 162 (221)
T 3dr5_A 87 IDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFGQVS---PMDLKALVDAAWPLLRRGGALVLA 162 (221)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEECCC---TTTHHHHHHHHHHHEEEEEEEEET
T ss_pred EECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEEcCc---HHHHHHHHHHHHHHcCCCcEEEEe
Confidence 7999999999988653 12 4799999998764 2 33689999998653 446678999999999999999985
No 202
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.16 E-value=4.7e-07 Score=73.74 Aligned_cols=71 Identities=11% Similarity=0.028 Sum_probs=56.1
Q ss_pred CcChHHHHHhhCCCCC---CCCceeEEEcCCCC-CCCC--CCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPED---TEVIYEKKFVDEEH-LPFA--ENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~---~~~~i~f~~~D~~~-l~~~--~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|++++. ...+++++++|+.+ ++.. .++||+|++... ..+....++++.++|||||++++..
T Consensus 94 vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 94 LEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLIFIDAD---KPNNPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp EECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEEEECSC---GGGHHHHHHHHHHTCCTTCEEEEEC
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEEEECCc---hHHHHHHHHHHHHhcCCCeEEEEeC
Confidence 7999999999988653 12479999999976 3432 348999998653 4466789999999999999999874
No 203
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.16 E-value=5.9e-07 Score=74.38 Aligned_cols=76 Identities=16% Similarity=0.203 Sum_probs=59.0
Q ss_pred CCcChHHHHHhhCCCCC------CCCceeEEEcCCCC-CCCCCCccceeeecccccccCC----hhHHHHHHHhhhcCCc
Q psy16312 1 MCDNCESILSQAEPPED------TEVIYEKKFVDEEH-LPFAENSVDLLISNLALHWVNN----LPGCFQQVLKCLRQDG 69 (245)
Q Consensus 1 ~iD~S~~ml~~A~~~~~------~~~~i~f~~~D~~~-l~~~~~~FD~Vis~~~l~~~~d----~~~~l~~i~r~LkpGG 69 (245)
.+|+++.|++.|+++++ ..++++++++|+.. ++..+++||+|++....++.+. ...++++++++|+|||
T Consensus 104 ~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG 183 (275)
T 1iy9_A 104 LVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDG 183 (275)
T ss_dssp EEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEE
T ss_pred EEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCc
Confidence 37999999999998652 23689999999875 3434578999999765544321 2579999999999999
Q ss_pred EEEEEec
Q psy16312 70 VFLASIF 76 (245)
Q Consensus 70 ~l~~~~~ 76 (245)
++++...
T Consensus 184 ~lv~~~~ 190 (275)
T 1iy9_A 184 IFVAQTD 190 (275)
T ss_dssp EEEEECC
T ss_pred EEEEEcC
Confidence 9998853
No 204
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.15 E-value=2e-07 Score=74.51 Aligned_cols=69 Identities=6% Similarity=-0.005 Sum_probs=57.0
Q ss_pred CcChHHHHHhhCCCCCC-------CCceeEEEcCCCCCC----CCCCccceeeecccccccCChhHHHHHHHhhhcCCcE
Q psy16312 2 CDNCESILSQAEPPEDT-------EVIYEKKFVDEEHLP----FAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGV 70 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-------~~~i~f~~~D~~~l~----~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~ 70 (245)
+|+|+.|++.|+++... ..++++.++|+.... ...++||+|++..+++++ +.++.++|||||+
T Consensus 115 vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~------~~~~~~~LkpgG~ 188 (227)
T 2pbf_A 115 LERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEKKELGLFDAIHVGASASEL------PEILVDLLAENGK 188 (227)
T ss_dssp EESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHHHHHCCEEEEEECSBBSSC------CHHHHHHEEEEEE
T ss_pred EeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccCccCCCcCEEEECCchHHH------HHHHHHhcCCCcE
Confidence 69999999999886431 247999999998765 556789999999998865 4788999999999
Q ss_pred EEEEec
Q psy16312 71 FLASIF 76 (245)
Q Consensus 71 l~~~~~ 76 (245)
+++.+.
T Consensus 189 lv~~~~ 194 (227)
T 2pbf_A 189 LIIPIE 194 (227)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 998864
No 205
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.14 E-value=3.8e-07 Score=78.09 Aligned_cols=71 Identities=14% Similarity=0.127 Sum_probs=57.0
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCCCCCCccceeeecccccccC--ChhHHHHHHHhhhcCCcEEEEE
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVN--NLPGCFQQVLKCLRQDGVFLAS 74 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~--d~~~~l~~i~r~LkpGG~l~~~ 74 (245)
+|+|+ |++.|+++.. + ..+++++++|+++++++ ++||+|+|..+++++. +....+.+++++|||||+++++
T Consensus 79 vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~-~~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 79 VEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp EECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred ECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC-CceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 68886 8888877542 1 25799999999998876 7899999998777664 3457888999999999999854
No 206
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.10 E-value=3.8e-07 Score=72.08 Aligned_cols=70 Identities=16% Similarity=0.166 Sum_probs=56.0
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCC-CCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHL-PFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l-~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|++++.. ..+++++++|+.+. +..++ ||+|++... ..+...+++++.++|||||++++..
T Consensus 87 vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~---~~~~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 87 IDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD---VFNGADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp EESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT---TSCHHHHHHHHGGGEEEEEEEEEES
T ss_pred EECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC---hhhhHHHHHHHHHhcCCCeEEEEEC
Confidence 79999999999876431 24699999999753 54446 999998743 4578899999999999999999864
No 207
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.07 E-value=7.8e-07 Score=71.45 Aligned_cols=71 Identities=20% Similarity=0.140 Sum_probs=57.7
Q ss_pred CcChHHHHHhhCCCCC---CCCceeEEEcCCCCC-CCC--CCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPED---TEVIYEKKFVDEEHL-PFA--ENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~---~~~~i~f~~~D~~~l-~~~--~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|++++. ...++.+.++|+.+. +.. +++||+|++.... .+...+++++.++|+|||++++..
T Consensus 84 vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~~~~~---~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 84 IERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLFIDAAK---GQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp ECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEEEEGGG---SCHHHHHHHHGGGEEEEEEEEEET
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEEECCCH---HHHHHHHHHHHHHcCCCeEEEEEc
Confidence 7999999999988643 124699999999874 432 4789999997764 377899999999999999999874
No 208
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.04 E-value=9.7e-07 Score=78.76 Aligned_cols=71 Identities=15% Similarity=0.143 Sum_probs=57.0
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCCCCCCccceeeecccccccCC--hhHHHHHHHhhhcCCcEEEEE
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNN--LPGCFQQVLKCLRQDGVFLAS 74 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d--~~~~l~~i~r~LkpGG~l~~~ 74 (245)
+|+|+ |++.|++++. + ..+++++++|+++++++ ++||+|+|+.+++++.+ ....+.+++++|||||++++.
T Consensus 187 vD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~-~~fD~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~~ 262 (480)
T 3b3j_A 187 VEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP-EQVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 262 (480)
T ss_dssp EECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEESC
T ss_pred EEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC-CCeEEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEEE
Confidence 79998 9999987542 1 25799999999998776 68999999888776643 356788899999999998853
No 209
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.99 E-value=3.9e-06 Score=74.27 Aligned_cols=76 Identities=12% Similarity=0.098 Sum_probs=57.7
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCC--CCCCccceeee------cccccccCCh----------------h
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLP--FAENSVDLLIS------NLALHWVNNL----------------P 55 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~--~~~~~FD~Vis------~~~l~~~~d~----------------~ 55 (245)
+|+|+.+++.+++++. +..++.+.++|+..++ +.+++||+|++ ..+++..+|. .
T Consensus 290 ~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~ 369 (450)
T 2yxl_A 290 FDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQR 369 (450)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHH
Confidence 6999999999987643 2247999999999886 55578999996 2233333332 5
Q ss_pred HHHHHHHhhhcCCcEEEEEecC
Q psy16312 56 GCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 56 ~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
.+|.++.++|||||++++++..
T Consensus 370 ~iL~~a~~~LkpGG~lvy~tcs 391 (450)
T 2yxl_A 370 ELLESAARLVKPGGRLLYTTCS 391 (450)
T ss_dssp HHHHHHHTTEEEEEEEEEEESC
T ss_pred HHHHHHHHhcCCCcEEEEEeCC
Confidence 6899999999999999988644
No 210
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.96 E-value=7.4e-06 Score=63.61 Aligned_cols=65 Identities=15% Similarity=0.118 Sum_probs=47.8
Q ss_pred CceeEE-EcCCCCCC--------CCCCccceeeecccccc----cCCh-------hHHHHHHHhhhcCCcEEEEEecCCC
Q psy16312 20 VIYEKK-FVDEEHLP--------FAENSVDLLISNLALHW----VNNL-------PGCFQQVLKCLRQDGVFLASIFGGE 79 (245)
Q Consensus 20 ~~i~f~-~~D~~~l~--------~~~~~FD~Vis~~~l~~----~~d~-------~~~l~~i~r~LkpGG~l~~~~~~~~ 79 (245)
.++++. ++|+...+ +++++||+|+|..++++ ..|. ..++++++++|||||++++.++...
T Consensus 70 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~~~ 149 (196)
T 2nyu_A 70 EGATFLCPADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWAGS 149 (196)
T ss_dssp TTCEEECSCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCSG
T ss_pred CCCeEEEeccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecCCc
Confidence 467888 88887653 33468999999765554 3343 4789999999999999999887654
Q ss_pred cHHHH
Q psy16312 80 TLYEL 84 (245)
Q Consensus 80 ~~~~~ 84 (245)
...++
T Consensus 150 ~~~~~ 154 (196)
T 2nyu_A 150 QSRRL 154 (196)
T ss_dssp GGHHH
T ss_pred cHHHH
Confidence 44443
No 211
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.96 E-value=1.2e-06 Score=72.40 Aligned_cols=75 Identities=9% Similarity=-0.026 Sum_probs=57.4
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCC----CCCccceeeeccc------cc------------ccCChhHH
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPF----AENSVDLLISNLA------LH------------WVNNLPGC 57 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~----~~~~FD~Vis~~~------l~------------~~~d~~~~ 57 (245)
+|+|+.|++.+++++. +..+++++++|+..++. .+++||+|++... ++ .......+
T Consensus 114 vD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~ 193 (274)
T 3ajd_A 114 VEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKEL 193 (274)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEEECCC------------HHHHTGGGTCHHHH
T ss_pred ECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHH
Confidence 7999999999988643 22479999999987754 2578999998621 11 22456789
Q ss_pred HHHHHhhhcCCcEEEEEec
Q psy16312 58 FQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 58 l~~i~r~LkpGG~l~~~~~ 76 (245)
++++.++|||||++++++.
T Consensus 194 l~~~~~~LkpgG~lv~stc 212 (274)
T 3ajd_A 194 IDIGIDLLKKDGELVYSTC 212 (274)
T ss_dssp HHHHHHHEEEEEEEEEEES
T ss_pred HHHHHHhCCCCCEEEEEEC
Confidence 9999999999999998864
No 212
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=97.96 E-value=1.7e-06 Score=75.98 Aligned_cols=72 Identities=10% Similarity=0.052 Sum_probs=54.2
Q ss_pred CcChHHHHHhh-------CCCCC--C--CCceeEEEcCCCCC--CC--CCCccceeeecccccccCChhHHHHHHHhhhc
Q psy16312 2 CDNCESILSQA-------EPPED--T--EVIYEKKFVDEEHL--PF--AENSVDLLISNLALHWVNNLPGCFQQVLKCLR 66 (245)
Q Consensus 2 iD~S~~ml~~A-------~~~~~--~--~~~i~f~~~D~~~l--~~--~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~Lk 66 (245)
+|+|+.|++.| ++++. + ..+++++++|.... ++ ..++||+|+++..+ +.+++..+|+++.++||
T Consensus 272 VDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l-~~~d~~~~L~el~r~LK 350 (433)
T 1u2z_A 272 CEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAELIPQCDVILVNNFL-FDEDLNKKVEKILQTAK 350 (433)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHHHGGGCSEEEECCTT-CCHHHHHHHHHHHTTCC
T ss_pred EeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccccccccccccCCCCEEEEeCcc-ccccHHHHHHHHHHhCC
Confidence 68888887777 66432 1 25799999865432 22 24789999998766 45688899999999999
Q ss_pred CCcEEEEE
Q psy16312 67 QDGVFLAS 74 (245)
Q Consensus 67 pGG~l~~~ 74 (245)
|||++++.
T Consensus 351 pGG~lVi~ 358 (433)
T 1u2z_A 351 VGCKIISL 358 (433)
T ss_dssp TTCEEEES
T ss_pred CCeEEEEe
Confidence 99999876
No 213
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=97.93 E-value=1.7e-06 Score=71.79 Aligned_cols=74 Identities=11% Similarity=0.108 Sum_probs=55.7
Q ss_pred CCcChHHHHHhhCCCC----C--------CCCceeEEEcCCCCC-CCCCCccceeeecccccccC--C--hhHHHHHHHh
Q psy16312 1 MCDNCESILSQAEPPE----D--------TEVIYEKKFVDEEHL-PFAENSVDLLISNLALHWVN--N--LPGCFQQVLK 63 (245)
Q Consensus 1 ~iD~S~~ml~~A~~~~----~--------~~~~i~f~~~D~~~l-~~~~~~FD~Vis~~~l~~~~--d--~~~~l~~i~r 63 (245)
.+|+|+.|++.|++++ + ..++++++++|+.+. +. +++||+|++....++.+ . ...+++++++
T Consensus 103 ~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~ 181 (281)
T 1mjf_A 103 MVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYD 181 (281)
T ss_dssp EEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CCCEEEEEEECCCCC-----TTSHHHHHHHHH
T ss_pred EEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-cCCeeEEEECCCCCCCcchhhhHHHHHHHHHH
Confidence 3799999999998765 1 135799999998652 33 57899999976544322 1 2578999999
Q ss_pred hhcCCcEEEEEe
Q psy16312 64 CLRQDGVFLASI 75 (245)
Q Consensus 64 ~LkpGG~l~~~~ 75 (245)
+|+|||++++..
T Consensus 182 ~L~pgG~lv~~~ 193 (281)
T 1mjf_A 182 ALNNPGIYVTQA 193 (281)
T ss_dssp HEEEEEEEEEEE
T ss_pred hcCCCcEEEEEc
Confidence 999999998875
No 214
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.93 E-value=5.9e-07 Score=81.89 Aligned_cols=73 Identities=16% Similarity=0.161 Sum_probs=60.1
Q ss_pred CcChHHHHHhhCCCCCC--CCceeEEEcCCCCC--CCCCCccceeeecccccccCChhH--HHHHHHhhhcCCcEEEEE
Q psy16312 2 CDNCESILSQAEPPEDT--EVIYEKKFVDEEHL--PFAENSVDLLISNLALHWVNNLPG--CFQQVLKCLRQDGVFLAS 74 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~--~~~i~f~~~D~~~l--~~~~~~FD~Vis~~~l~~~~d~~~--~l~~i~r~LkpGG~l~~~ 74 (245)
||+|+.||+.|+.++.. ..+++|++++++++ ++.+++||+|+|..+|+|++|+.. .+..+.+.|+++|..++.
T Consensus 94 iD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~~ 172 (569)
T 4azs_A 94 IDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVIL 172 (569)
T ss_dssp EESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEEE
T ss_pred ECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcchhcCCCHHHHHHHHHHHHHhccccceeeE
Confidence 79999999999886532 35799999999988 456789999999999999998874 356788889999975443
No 215
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=97.92 E-value=3.4e-07 Score=74.40 Aligned_cols=71 Identities=17% Similarity=0.185 Sum_probs=55.8
Q ss_pred CcChHHHHHhhCCCCC---CCCceeEEEcCCCCC-CCC-----CCccceeeecccccccCChhHHHHHHHhhhcCCcEEE
Q psy16312 2 CDNCESILSQAEPPED---TEVIYEKKFVDEEHL-PFA-----ENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~---~~~~i~f~~~D~~~l-~~~-----~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~ 72 (245)
+|+|+.|++.|++++. ...+++++++|+.+. +.. +++||+|++... ..+....++++.++|||||+++
T Consensus 91 iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~lv 167 (242)
T 3r3h_A 91 CDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDAD---KTNYLNYYELALKLVTPKGLIA 167 (242)
T ss_dssp EECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEEEESC---GGGHHHHHHHHHHHEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEEEcCC---hHHhHHHHHHHHHhcCCCeEEE
Confidence 7899999999887643 124799999999764 221 478999998654 4466788999999999999999
Q ss_pred EEe
Q psy16312 73 ASI 75 (245)
Q Consensus 73 ~~~ 75 (245)
+..
T Consensus 168 ~d~ 170 (242)
T 3r3h_A 168 IDN 170 (242)
T ss_dssp EEC
T ss_pred EEC
Confidence 864
No 216
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=97.91 E-value=1.1e-05 Score=62.97 Aligned_cols=58 Identities=12% Similarity=0.009 Sum_probs=46.7
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccCC--hhHHHHHHHhhh
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNN--LPGCFQQVLKCL 65 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d--~~~~l~~i~r~L 65 (245)
+|+|+.|++.|+++.. +++++++|+.+++ ++||+|+++..++|..+ ....++++.++|
T Consensus 80 vD~~~~~~~~a~~~~~---~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~ 139 (200)
T 1ne2_A 80 FDIDPDAIETAKRNCG---GVNFMVADVSEIS---GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS 139 (200)
T ss_dssp EESCHHHHHHHHHHCT---TSEEEECCGGGCC---CCEEEEEECCCC-------CHHHHHHHHHHE
T ss_pred EECCHHHHHHHHHhcC---CCEEEECcHHHCC---CCeeEEEECCCchhccCchhHHHHHHHHHhc
Confidence 7999999999998775 7899999999875 68999999999999864 346888999988
No 217
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.90 E-value=5.1e-07 Score=76.82 Aligned_cols=75 Identities=11% Similarity=0.060 Sum_probs=57.1
Q ss_pred CcChHHHHHhhCCCCC--CCC--ceeEEEcCCCCCCC----CCCccceeeecc----------cccccCChhHHHHHHHh
Q psy16312 2 CDNCESILSQAEPPED--TEV--IYEKKFVDEEHLPF----AENSVDLLISNL----------ALHWVNNLPGCFQQVLK 63 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~--~i~f~~~D~~~l~~----~~~~FD~Vis~~----------~l~~~~d~~~~l~~i~r 63 (245)
+|+|+.|++.|++++. +.. +++|+++|+.++.. ..++||+|+++- .+++..+...++.++.+
T Consensus 181 VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~ 260 (332)
T 2igt_A 181 VDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTHGEVWQLFDHLPLMLDICRE 260 (332)
T ss_dssp ECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTTCCEEEHHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCchHHHHHHHHHHHHHHHHHHH
Confidence 7999999999998653 112 48999999977532 146899999842 23455567789999999
Q ss_pred hhcCCcEEEEEec
Q psy16312 64 CLRQDGVFLASIF 76 (245)
Q Consensus 64 ~LkpGG~l~~~~~ 76 (245)
+|+|||.++++..
T Consensus 261 ~LkpgG~lli~~~ 273 (332)
T 2igt_A 261 ILSPKALGLVLTA 273 (332)
T ss_dssp TBCTTCCEEEEEE
T ss_pred hcCcCcEEEEEEC
Confidence 9999999877753
No 218
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.88 E-value=9.5e-07 Score=70.40 Aligned_cols=71 Identities=17% Similarity=0.163 Sum_probs=55.2
Q ss_pred CcChHHHHHhhCCCCC---CCCceeEEEcCCCCC-C-CC----CCccceeeecccccccCChhHHHHHHHhhhcCCcEEE
Q psy16312 2 CDNCESILSQAEPPED---TEVIYEKKFVDEEHL-P-FA----ENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~---~~~~i~f~~~D~~~l-~-~~----~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~ 72 (245)
+|+|+.|++.|++++. ...+++++++|+.+. + +. .++||+|++... ..+....++++.++|||||+++
T Consensus 95 vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~~---~~~~~~~l~~~~~~L~pgG~lv 171 (225)
T 3tr6_A 95 CDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDAD---KANTDLYYEESLKLLREGGLIA 171 (225)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEEECSC---GGGHHHHHHHHHHHEEEEEEEE
T ss_pred EeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEEEECCC---HHHHHHHHHHHHHhcCCCcEEE
Confidence 7999999999988653 124599999999553 2 11 178999997553 4467889999999999999999
Q ss_pred EEe
Q psy16312 73 ASI 75 (245)
Q Consensus 73 ~~~ 75 (245)
+..
T Consensus 172 ~~~ 174 (225)
T 3tr6_A 172 VDN 174 (225)
T ss_dssp EEC
T ss_pred EeC
Confidence 874
No 219
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=97.85 E-value=2.5e-06 Score=69.39 Aligned_cols=71 Identities=10% Similarity=0.068 Sum_probs=56.4
Q ss_pred CcChHHHHHhhCCCCC---CCCceeEEEcCCCCC-C-C-----CCCccceeeecccccccCChhHHHHHHHhhhcCCcEE
Q psy16312 2 CDNCESILSQAEPPED---TEVIYEKKFVDEEHL-P-F-----AENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVF 71 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~---~~~~i~f~~~D~~~l-~-~-----~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l 71 (245)
+|+|+.|++.|++++. ...+++++++|+.+. + + .+++||+|++... ..+....++++.++|||||++
T Consensus 110 iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpGG~l 186 (247)
T 1sui_A 110 MDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDAD---KDNYLNYHKRLIDLVKVGGVI 186 (247)
T ss_dssp EESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECSC---STTHHHHHHHHHHHBCTTCCE
T ss_pred EECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcCc---hHHHHHHHHHHHHhCCCCeEE
Confidence 7999999999988643 124799999998753 3 2 1478999998653 456789999999999999999
Q ss_pred EEEe
Q psy16312 72 LASI 75 (245)
Q Consensus 72 ~~~~ 75 (245)
++..
T Consensus 187 v~d~ 190 (247)
T 1sui_A 187 GYDN 190 (247)
T ss_dssp EEEC
T ss_pred EEec
Confidence 9864
No 220
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=97.82 E-value=2.8e-06 Score=67.57 Aligned_cols=71 Identities=15% Similarity=0.107 Sum_probs=54.6
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCC-C-CC---CCccceeeecccccccCChhHHHHHHHhhhcCCcEEEE
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHL-P-FA---ENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLA 73 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l-~-~~---~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~ 73 (245)
+|+|+.|++.|++++. + ..+++++++|+.+. + +. .++||+|++.... .+....++++.++|+|||++++
T Consensus 89 vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD~v~~d~~~---~~~~~~l~~~~~~L~pgG~lv~ 165 (223)
T 3duw_A 89 LEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFDFIFIDADK---QNNPAYFEWALKLSRPGTVIIG 165 (223)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCSEEEECSCG---GGHHHHHHHHHHTCCTTCEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcCEEEEcCCc---HHHHHHHHHHHHhcCCCcEEEE
Confidence 7999999999987643 2 24699999999653 2 11 2679999987653 3557899999999999999888
Q ss_pred Ee
Q psy16312 74 SI 75 (245)
Q Consensus 74 ~~ 75 (245)
..
T Consensus 166 ~~ 167 (223)
T 3duw_A 166 DN 167 (223)
T ss_dssp ES
T ss_pred eC
Confidence 74
No 221
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=97.81 E-value=7.1e-06 Score=73.08 Aligned_cols=76 Identities=9% Similarity=0.024 Sum_probs=56.7
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCC-CCCccceeeec---c---cccccCC----------------hhH
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPF-AENSVDLLISN---L---ALHWVNN----------------LPG 56 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~-~~~~FD~Vis~---~---~l~~~~d----------------~~~ 56 (245)
+|+|+.|++.+++++. +..++.++++|+..++. .+++||+|++. . ++...++ ...
T Consensus 148 vDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~ 227 (479)
T 2frx_A 148 NEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRE 227 (479)
T ss_dssp ECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHH
Confidence 7999999999988653 23479999999998763 45789999973 1 2222222 236
Q ss_pred HHHHHHhhhcCCcEEEEEecC
Q psy16312 57 CFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 57 ~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+|.++.++|||||++++++..
T Consensus 228 iL~~a~~~LkpGG~LvysTcs 248 (479)
T 2frx_A 228 LIDSAFHALRPGGTLVYSTCT 248 (479)
T ss_dssp HHHHHHHHEEEEEEEEEEESC
T ss_pred HHHHHHHhcCCCCEEEEeccc
Confidence 799999999999999988654
No 222
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=97.79 E-value=6.8e-06 Score=68.28 Aligned_cols=71 Identities=11% Similarity=0.140 Sum_probs=53.5
Q ss_pred CcChHHHHHhhCCCCC--CC-CceeEEEcCCCCCCCCCCcc---ceeeecc------------ccccc--------CChh
Q psy16312 2 CDNCESILSQAEPPED--TE-VIYEKKFVDEEHLPFAENSV---DLLISNL------------ALHWV--------NNLP 55 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~-~~i~f~~~D~~~l~~~~~~F---D~Vis~~------------~l~~~--------~d~~ 55 (245)
+|+|+.|++.|++++. +. .+++|+++|+.+. +. ++| |+|+|+- +. |- .|..
T Consensus 152 vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~-~~-~~f~~~D~IvsnPPyi~~~~~l~~~v~-~ep~~al~~~~dgl 228 (284)
T 1nv8_A 152 TDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEP-FK-EKFASIEMILSNPPYVKSSAHLPKDVL-FEPPEALFGGEDGL 228 (284)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGG-GG-GGTTTCCEEEECCCCBCGGGSCTTSCC-CSCHHHHBCTTTSC
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECcchhh-cc-cccCCCCEEEEcCCCCCcccccChhhc-cCcHHHhcCCCcHH
Confidence 7999999999998643 11 2499999999873 33 579 9999971 11 21 1233
Q ss_pred HHHHHHH-hhhcCCcEEEEEe
Q psy16312 56 GCFQQVL-KCLRQDGVFLASI 75 (245)
Q Consensus 56 ~~l~~i~-r~LkpGG~l~~~~ 75 (245)
.+++++. +.|+|||++++..
T Consensus 229 ~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 229 DFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp HHHHHHHHHCCCTTCEEEEEC
T ss_pred HHHHHHHHhcCCCCCEEEEEE
Confidence 7899999 9999999999875
No 223
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.77 E-value=3.4e-06 Score=67.82 Aligned_cols=71 Identities=17% Similarity=0.211 Sum_probs=55.4
Q ss_pred CcChHHHHHhhCCCCC---CCCceeEEEcCCCC----CCCCC--CccceeeecccccccCChhHHHHHHHhhhcCCcEEE
Q psy16312 2 CDNCESILSQAEPPED---TEVIYEKKFVDEEH----LPFAE--NSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~---~~~~i~f~~~D~~~----l~~~~--~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~ 72 (245)
+|+|+.+++.|++++. ...++++.++|+.+ ++..+ ++||+|++... ..+....++++.++|+|||+++
T Consensus 103 iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~~---~~~~~~~l~~~~~~LkpgG~lv 179 (232)
T 3cbg_A 103 CDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLIFIDAD---KRNYPRYYEIGLNLLRRGGLMV 179 (232)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEEECSC---GGGHHHHHHHHHHTEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEEECCC---HHHHHHHHHHHHHHcCCCeEEE
Confidence 7999999999987642 12469999999754 23333 78999998654 3466789999999999999999
Q ss_pred EEe
Q psy16312 73 ASI 75 (245)
Q Consensus 73 ~~~ 75 (245)
+..
T Consensus 180 ~~~ 182 (232)
T 3cbg_A 180 IDN 182 (232)
T ss_dssp EEC
T ss_pred EeC
Confidence 874
No 224
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=97.74 E-value=8.1e-05 Score=58.21 Aligned_cols=66 Identities=11% Similarity=0.007 Sum_probs=52.0
Q ss_pred CcChHHHHHhhCCCCCCC-CceeEEEcCCCCCCCCCCccceeeecccccccC--ChhHHHHHHHhhhcCCcEEE
Q psy16312 2 CDNCESILSQAEPPEDTE-VIYEKKFVDEEHLPFAENSVDLLISNLALHWVN--NLPGCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~-~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~--d~~~~l~~i~r~LkpGG~l~ 72 (245)
+|+|+.|++.|+++.... .+++++++|+.+++ ++||+|+++..+++.. .....++++.++| ||.++
T Consensus 78 vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~---~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~ 146 (207)
T 1wy7_A 78 VEVDKEAVDVLIENLGEFKGKFKVFIGDVSEFN---SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYS 146 (207)
T ss_dssp EESCHHHHHHHHHHTGGGTTSEEEEESCGGGCC---CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCEEEEECchHHcC---CCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEE
Confidence 799999999999876531 27999999999875 5899999998888774 3347788899988 55443
No 225
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=97.71 E-value=4.2e-05 Score=59.65 Aligned_cols=61 Identities=16% Similarity=0.105 Sum_probs=45.1
Q ss_pred CceeEEEcCCCCCCCC-----------CCccceeeecccccccC----C-------hhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 20 VIYEKKFVDEEHLPFA-----------ENSVDLLISNLALHWVN----N-------LPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 20 ~~i~f~~~D~~~l~~~-----------~~~FD~Vis~~~l~~~~----d-------~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
++++++++|+.+.+.. .++||+|+|.....+.. | ...++..+.++|||||.|++.++.
T Consensus 62 ~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k~~~ 141 (191)
T 3dou_A 62 AGVRFIRCDIFKETIFDDIDRALREEGIEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLKQFQ 141 (191)
T ss_dssp TTCEEEECCTTSSSHHHHHHHHHHHHTCSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCeEEEEccccCHHHHHHHHHHhhcccCCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEEEcC
Confidence 4799999999886521 14899999976543321 2 246789999999999999988765
Q ss_pred CCc
Q psy16312 78 GET 80 (245)
Q Consensus 78 ~~~ 80 (245)
...
T Consensus 142 ~~~ 144 (191)
T 3dou_A 142 GDM 144 (191)
T ss_dssp STH
T ss_pred CCC
Confidence 543
No 226
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=97.70 E-value=4.7e-05 Score=61.14 Aligned_cols=92 Identities=7% Similarity=0.011 Sum_probs=67.0
Q ss_pred CcChHHHHHhhCCCCC---CCCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCC
Q psy16312 2 CDNCESILSQAEPPED---TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGG 78 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~---~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~ 78 (245)
+|+++.+++.|+++.. -..+++++++|..+...+++.||+|+...+.. .-....+.+....|+++|+|+++...
T Consensus 51 vDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmGg--~lI~~IL~~~~~~l~~~~~lIlqp~~- 127 (230)
T 3lec_A 51 GEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMGG--RLIADILNNDIDKLQHVKTLVLQPNN- 127 (230)
T ss_dssp EESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH--HHHHHHHHHTGGGGTTCCEEEEEESS-
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCch--HHHHHHHHHHHHHhCcCCEEEEECCC-
Confidence 7999999999998653 12469999999987665544799877543322 12457788899999999999988411
Q ss_pred CcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeE
Q psy16312 79 ETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLT 125 (245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~ 125 (245)
....++++|.+.||.++.
T Consensus 128 -----------------------------~~~~lr~~L~~~Gf~i~~ 145 (230)
T 3lec_A 128 -----------------------------REDDLRKWLAANDFEIVA 145 (230)
T ss_dssp -----------------------------CHHHHHHHHHHTTEEEEE
T ss_pred -----------------------------ChHHHHHHHHHCCCEEEE
Confidence 134567778888988754
No 227
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=97.69 E-value=8.1e-06 Score=65.78 Aligned_cols=71 Identities=25% Similarity=0.302 Sum_probs=55.1
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCC-C--------------CCC--CccceeeecccccccCChhHHHHHH
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHL-P--------------FAE--NSVDLLISNLALHWVNNLPGCFQQV 61 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l-~--------------~~~--~~FD~Vis~~~l~~~~d~~~~l~~i 61 (245)
+|+|+.|++.|++++. + ..++.+.++|+.+. + +++ ++||+|++... ..+....++++
T Consensus 91 vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~---~~~~~~~l~~~ 167 (239)
T 2hnk_A 91 CDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDAD---KENYPNYYPLI 167 (239)
T ss_dssp EESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSC---GGGHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCC---HHHHHHHHHHH
Confidence 7999999999988642 1 23599999998652 2 222 78999998754 34567899999
Q ss_pred HhhhcCCcEEEEEe
Q psy16312 62 LKCLRQDGVFLASI 75 (245)
Q Consensus 62 ~r~LkpGG~l~~~~ 75 (245)
.++|+|||++++..
T Consensus 168 ~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 168 LKLLKPGGLLIADN 181 (239)
T ss_dssp HHHEEEEEEEEEEC
T ss_pred HHHcCCCeEEEEEc
Confidence 99999999999875
No 228
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=97.67 E-value=5.3e-06 Score=66.96 Aligned_cols=71 Identities=14% Similarity=0.012 Sum_probs=55.5
Q ss_pred CcChHHHHHhhCCCCC---CCCceeEEEcCCCCC-C-C-----CCCccceeeecccccccCChhHHHHHHHhhhcCCcEE
Q psy16312 2 CDNCESILSQAEPPED---TEVIYEKKFVDEEHL-P-F-----AENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVF 71 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~---~~~~i~f~~~D~~~l-~-~-----~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l 71 (245)
+|+|+.|++.|++++. -..+++++++|+.+. + + .+++||+|++.. +..+....++++.++|+|||++
T Consensus 101 iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~---~~~~~~~~l~~~~~~L~pGG~l 177 (237)
T 3c3y_A 101 IDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVDA---DKPNYIKYHERLMKLVKVGGIV 177 (237)
T ss_dssp EESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEECS---CGGGHHHHHHHHHHHEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEECC---chHHHHHHHHHHHHhcCCCeEE
Confidence 7999999999987542 224699999998653 2 2 247899999864 3446678999999999999999
Q ss_pred EEEe
Q psy16312 72 LASI 75 (245)
Q Consensus 72 ~~~~ 75 (245)
++..
T Consensus 178 v~d~ 181 (237)
T 3c3y_A 178 AYDN 181 (237)
T ss_dssp EEEC
T ss_pred EEec
Confidence 8874
No 229
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=97.67 E-value=3e-05 Score=66.84 Aligned_cols=72 Identities=21% Similarity=0.064 Sum_probs=53.4
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCCCCCCccceeeeccccccc-------CC-hhHHHHHHHhhhcCCcE
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLPFAENSVDLLISNLALHWV-------NN-LPGCFQQVLKCLRQDGV 70 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~-------~d-~~~~l~~i~r~LkpGG~ 70 (245)
+|+|+.|++.|++++. + ..+++|.++|+.++++++++||+|+++-.++.. .+ ...++++++++| ||.
T Consensus 247 ~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l--~g~ 324 (373)
T 3tm4_A 247 IEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL--EKR 324 (373)
T ss_dssp EESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE--EEE
T ss_pred EeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc--CCe
Confidence 6999999999998753 1 247999999999999877899999997553321 11 256788888888 555
Q ss_pred EEEEe
Q psy16312 71 FLASI 75 (245)
Q Consensus 71 l~~~~ 75 (245)
+++.+
T Consensus 325 ~~~i~ 329 (373)
T 3tm4_A 325 GVFIT 329 (373)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 55443
No 230
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=97.67 E-value=2.5e-05 Score=67.32 Aligned_cols=69 Identities=20% Similarity=0.205 Sum_probs=54.3
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCCCCCCccceeeec---ccccccCChhHHHHHHHhhhcCCcEEE
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLPFAENSVDLLISN---LALHWVNNLPGCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~~~~~~FD~Vis~---~~l~~~~d~~~~l~~i~r~LkpGG~l~ 72 (245)
||.|+ |++.|++... + ..+|+++.+|++++.++ +.||+|||. ..|.+-.....++....++|||||.++
T Consensus 112 ve~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp-e~~DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 112 VEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP-EQVDAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp EECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS-SCEEEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEE
T ss_pred EeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC-ccccEEEeecccccccccchhhhHHHHHHhhCCCCceEC
Confidence 67775 8888876432 1 25699999999999887 789999994 445555567889999999999999976
No 231
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.66 E-value=3.8e-06 Score=78.29 Aligned_cols=75 Identities=19% Similarity=0.089 Sum_probs=59.2
Q ss_pred CcChHHHHHhhCCCCC--CC--CceeEEEcCCCC-CCCCCCccceeeecc-----------cccccCChhHHHHHHHhhh
Q psy16312 2 CDNCESILSQAEPPED--TE--VIYEKKFVDEEH-LPFAENSVDLLISNL-----------ALHWVNNLPGCFQQVLKCL 65 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~--~~i~f~~~D~~~-l~~~~~~FD~Vis~~-----------~l~~~~d~~~~l~~i~r~L 65 (245)
+|+|+.|++.|++++. +. .+++|+++|+.+ ++...++||+|++.- +++...+....+..+.++|
T Consensus 568 VD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~L 647 (703)
T 3v97_A 568 VDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLL 647 (703)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHE
T ss_pred EeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhc
Confidence 7999999999998653 21 369999999976 444457899999853 3444556778899999999
Q ss_pred cCCcEEEEEec
Q psy16312 66 RQDGVFLASIF 76 (245)
Q Consensus 66 kpGG~l~~~~~ 76 (245)
+|||++++++.
T Consensus 648 kpgG~L~~s~~ 658 (703)
T 3v97_A 648 RAGGTIMFSNN 658 (703)
T ss_dssp EEEEEEEEEEC
T ss_pred CCCcEEEEEEC
Confidence 99999998863
No 232
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.66 E-value=1.6e-05 Score=69.95 Aligned_cols=75 Identities=13% Similarity=0.099 Sum_probs=56.0
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCCC--CCCCccceeeec------ccccccCCh----------------hH
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHLP--FAENSVDLLISN------LALHWVNNL----------------PG 56 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l~--~~~~~FD~Vis~------~~l~~~~d~----------------~~ 56 (245)
+|+|+.+++.+++++.. +.++.+.++|+..++ +++++||+|++. .+++..++. ..
T Consensus 276 ~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~ 355 (429)
T 1sqg_A 276 VDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSE 355 (429)
T ss_dssp EESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHH
T ss_pred ECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHH
Confidence 68999999998876431 235789999999876 555789999962 223333332 37
Q ss_pred HHHHHHhhhcCCcEEEEEec
Q psy16312 57 CFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 57 ~l~~i~r~LkpGG~l~~~~~ 76 (245)
.+.++.++|||||++++++.
T Consensus 356 ~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 356 ILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp HHHHHGGGEEEEEEEEEEES
T ss_pred HHHHHHHhcCCCCEEEEEEC
Confidence 79999999999999998864
No 233
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=97.64 E-value=1.3e-05 Score=66.65 Aligned_cols=69 Identities=7% Similarity=0.066 Sum_probs=51.1
Q ss_pred CcChHHHHHhhCCCCCC---CCceeEEEcCCCCCCCCCCccceeeecccccccCChh-HHH--------------HHH--
Q psy16312 2 CDNCESILSQAEPPEDT---EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLP-GCF--------------QQV-- 61 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~---~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~-~~l--------------~~i-- 61 (245)
+|+|+.|++.|+++... ..+++++++|+..++++ +||+|+++...+|..+.- .++ +++
T Consensus 56 vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~--~fD~vv~nlpy~~~~~~~~~~l~~~~~~~~~~~m~qkEva~ 133 (285)
T 1zq9_A 56 CELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP--FFDTCVANLPYQISSPFVFKLLLHRPFFRCAILMFQREFAL 133 (285)
T ss_dssp EESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC--CCSEEEEECCGGGHHHHHHHHHHCSSCCSEEEEEEEHHHHH
T ss_pred EECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch--hhcEEEEecCcccchHHHHHHHhcCcchhhhhhhhhHHHHH
Confidence 79999999999886542 25799999999988775 799999987776653222 222 233
Q ss_pred HhhhcCCcEEE
Q psy16312 62 LKCLRQDGVFL 72 (245)
Q Consensus 62 ~r~LkpGG~l~ 72 (245)
+++|+|||.++
T Consensus 134 r~vlkPGg~~y 144 (285)
T 1zq9_A 134 RLVAKPGDKLY 144 (285)
T ss_dssp HHHCCTTCTTC
T ss_pred HHhcCCCCccc
Confidence 36999999864
No 234
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=97.62 E-value=2.6e-06 Score=67.99 Aligned_cols=71 Identities=13% Similarity=0.199 Sum_probs=54.8
Q ss_pred CcChHHHHHhhCCCCC---CCCceeEEEcCCCCC-C-CCC----CccceeeecccccccCChhHHHHHHHhhhcCCcEEE
Q psy16312 2 CDNCESILSQAEPPED---TEVIYEKKFVDEEHL-P-FAE----NSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~---~~~~i~f~~~D~~~l-~-~~~----~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~ 72 (245)
+|+|+.|++.|++++. ...+++++++|+.+. + +.+ ++||+|++... ..+....++++.++|+|||+++
T Consensus 100 vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~~---~~~~~~~l~~~~~~L~pgG~lv 176 (229)
T 2avd_A 100 CEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDAD---KENCSAYYERCLQLLRPGGILA 176 (229)
T ss_dssp EESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEEEECSC---STTHHHHHHHHHHHEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEEEECCC---HHHHHHHHHHHHHHcCCCeEEE
Confidence 7999999999987642 125799999998653 1 211 68999998654 3456789999999999999999
Q ss_pred EEe
Q psy16312 73 ASI 75 (245)
Q Consensus 73 ~~~ 75 (245)
+..
T Consensus 177 ~~~ 179 (229)
T 2avd_A 177 VLR 179 (229)
T ss_dssp EEC
T ss_pred EEC
Confidence 864
No 235
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=97.62 E-value=3.3e-06 Score=73.12 Aligned_cols=76 Identities=13% Similarity=0.076 Sum_probs=57.1
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCC----CCCccceeeecc---------cccccCChhHHHHHHHhhhc
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPF----AENSVDLLISNL---------ALHWVNNLPGCFQQVLKCLR 66 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~----~~~~FD~Vis~~---------~l~~~~d~~~~l~~i~r~Lk 66 (245)
+|+|+.|++.|++++. +..+++|+++|+.++.. .+++||+|++.- ...+..+....+.++.++|+
T Consensus 237 vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 316 (382)
T 1wxx_A 237 VDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLK 316 (382)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcC
Confidence 7999999999988653 22459999999976532 147899999843 22223445678999999999
Q ss_pred CCcEEEEEecC
Q psy16312 67 QDGVFLASIFG 77 (245)
Q Consensus 67 pGG~l~~~~~~ 77 (245)
|||.+++++..
T Consensus 317 pgG~l~~~~~~ 327 (382)
T 1wxx_A 317 EGGILATASCS 327 (382)
T ss_dssp EEEEEEEEECC
T ss_pred CCCEEEEEECC
Confidence 99999988643
No 236
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=97.59 E-value=4.8e-06 Score=67.57 Aligned_cols=73 Identities=5% Similarity=-0.030 Sum_probs=55.3
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCC-Cccceeeeccc-----------ccccCChhHHH----HHHHhhh
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAE-NSVDLLISNLA-----------LHWVNNLPGCF----QQVLKCL 65 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~-~~FD~Vis~~~-----------l~~~~d~~~~l----~~i~r~L 65 (245)
+|+|+.|++.|+++.....+++++++|+.++++++ ++| .|+++.- +.+..+....+ +.+.++|
T Consensus 57 id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll 135 (245)
T 1yub_A 57 IELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFPNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTL 135 (245)
T ss_dssp SSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCCCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHH
T ss_pred EECCHHHHHHHHHHhccCCceEEEECChhhcCcccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHh
Confidence 79999999999998764468999999999998763 689 7777631 22233555566 7799999
Q ss_pred cCCcEEEEEe
Q psy16312 66 RQDGVFLASI 75 (245)
Q Consensus 66 kpGG~l~~~~ 75 (245)
+|||.+.+..
T Consensus 136 ~~~G~l~v~~ 145 (245)
T 1yub_A 136 DIHRTLGLLL 145 (245)
T ss_dssp CGGGSHHHHT
T ss_pred CCCCchhhhh
Confidence 9999876543
No 237
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=97.58 E-value=3.3e-06 Score=73.46 Aligned_cols=76 Identities=7% Similarity=-0.025 Sum_probs=57.5
Q ss_pred CcChHHHHHhhCCCCC--CCC-ceeEEEcCCCCCCC----CCCccceeeecc---------cccccCChhHHHHHHHhhh
Q psy16312 2 CDNCESILSQAEPPED--TEV-IYEKKFVDEEHLPF----AENSVDLLISNL---------ALHWVNNLPGCFQQVLKCL 65 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~-~i~f~~~D~~~l~~----~~~~FD~Vis~~---------~l~~~~d~~~~l~~i~r~L 65 (245)
+|+|+.|++.|++++. +.. +++|+++|+.++.. ..++||+|++.- ..++..+....+.++.++|
T Consensus 246 vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~L 325 (396)
T 2as0_A 246 IDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLV 325 (396)
T ss_dssp EESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTE
T ss_pred EeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhc
Confidence 7999999999988653 212 79999999976531 247899999853 2233345678899999999
Q ss_pred cCCcEEEEEecC
Q psy16312 66 RQDGVFLASIFG 77 (245)
Q Consensus 66 kpGG~l~~~~~~ 77 (245)
+|||.+++++..
T Consensus 326 kpgG~lv~~~~~ 337 (396)
T 2as0_A 326 KDGGILVTCSCS 337 (396)
T ss_dssp EEEEEEEEEECC
T ss_pred CCCcEEEEEECC
Confidence 999998887644
No 238
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=97.58 E-value=1.6e-05 Score=70.23 Aligned_cols=76 Identities=8% Similarity=-0.028 Sum_probs=55.0
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCC-CCCCccceeeeccc---cccc-CCh------------------hH
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLP-FAENSVDLLISNLA---LHWV-NNL------------------PG 56 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~-~~~~~FD~Vis~~~---l~~~-~d~------------------~~ 56 (245)
+|+|+.+++.+++++. +..++.+.++|+..++ ..+++||+|++..- ...+ .++ ..
T Consensus 136 vDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~ 215 (456)
T 3m4x_A 136 NEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQE 215 (456)
T ss_dssp ECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHH
Confidence 7999999999988653 2347899999998765 23579999997321 1111 111 26
Q ss_pred HHHHHHhhhcCCcEEEEEecC
Q psy16312 57 CFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 57 ~l~~i~r~LkpGG~l~~~~~~ 77 (245)
.|.++.++|||||+++.++..
T Consensus 216 iL~~a~~~LkpGG~LvYsTCs 236 (456)
T 3m4x_A 216 ILSSAIKMLKNKGQLIYSTCT 236 (456)
T ss_dssp HHHHHHHTEEEEEEEEEEESC
T ss_pred HHHHHHHhcCCCcEEEEEEee
Confidence 799999999999999987643
No 239
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=97.57 E-value=5.4e-05 Score=64.44 Aligned_cols=73 Identities=16% Similarity=0.131 Sum_probs=56.7
Q ss_pred CcChHHHHHhhCCCCC-CCCceeEEEcCCCCCCCCCCccceeeecccccccCChh------------------HHHHHHH
Q psy16312 2 CDNCESILSQAEPPED-TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLP------------------GCFQQVL 62 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~-~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~------------------~~l~~i~ 62 (245)
+|+++.|++.|+.+.. .+.++.+.++|..... ..+.||+|+++-.++++++.. .++.++.
T Consensus 165 iDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~-~~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~ 243 (344)
T 2f8l_A 165 VDVDDLLISLALVGADLQRQKMTLLHQDGLANL-LVDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGM 243 (344)
T ss_dssp EESCHHHHHHHHHHHHHHTCCCEEEESCTTSCC-CCCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHhCCCCceEEECCCCCcc-ccCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHH
Confidence 6899999999987542 1135789999987643 347899999998877664322 5799999
Q ss_pred hhhcCCcEEEEEe
Q psy16312 63 KCLRQDGVFLASI 75 (245)
Q Consensus 63 r~LkpGG~l~~~~ 75 (245)
+.|+|||++++.+
T Consensus 244 ~~Lk~gG~~~~v~ 256 (344)
T 2f8l_A 244 RYTKPGGYLFFLV 256 (344)
T ss_dssp HTEEEEEEEEEEE
T ss_pred HHhCCCCEEEEEE
Confidence 9999999998886
No 240
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=97.56 E-value=3.1e-06 Score=73.39 Aligned_cols=76 Identities=13% Similarity=0.107 Sum_probs=54.9
Q ss_pred CcChHHHHHhhCCCCC--CCC--ceeEEEcCCCC-CCC---CCCccceeeeccc---------ccccCChhHHHHHHHhh
Q psy16312 2 CDNCESILSQAEPPED--TEV--IYEKKFVDEEH-LPF---AENSVDLLISNLA---------LHWVNNLPGCFQQVLKC 64 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~--~i~f~~~D~~~-l~~---~~~~FD~Vis~~~---------l~~~~d~~~~l~~i~r~ 64 (245)
+|+|+.|++.|++++. +.. +++|+++|+.+ ++. ...+||+|++.-- ...+.+...++..+.++
T Consensus 241 vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~ 320 (385)
T 2b78_A 241 VDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEI 320 (385)
T ss_dssp EESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHT
T ss_pred EECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHh
Confidence 7999999999998653 212 79999999976 331 2358999998422 22223344567888999
Q ss_pred hcCCcEEEEEecC
Q psy16312 65 LRQDGVFLASIFG 77 (245)
Q Consensus 65 LkpGG~l~~~~~~ 77 (245)
|+|||.+++++..
T Consensus 321 L~pgG~l~~~~~~ 333 (385)
T 2b78_A 321 LSENGLIIASTNA 333 (385)
T ss_dssp EEEEEEEEEEECC
T ss_pred cCCCcEEEEEeCC
Confidence 9999999988743
No 241
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=97.54 E-value=0.00023 Score=58.78 Aligned_cols=104 Identities=11% Similarity=0.072 Sum_probs=72.2
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCC
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGG 78 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~ 78 (245)
+|+++.+++.+++++. + ..++++.++|+.+++.. +.||.|+++.- +.....+..+.++|||||++.+..+..
T Consensus 154 vD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~-~~~D~Vi~~~p----~~~~~~l~~a~~~lk~gG~ih~~~~~~ 228 (278)
T 3k6r_A 154 IEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGE-NIADRILMGYV----VRTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp ECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCC-SCEEEEEECCC----SSGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccc-cCCCEEEECCC----CcHHHHHHHHHHHcCCCCEEEEEeeec
Confidence 7999999999988643 1 24689999999988754 78999997632 345678888999999999987654322
Q ss_pred CcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEEEEeEE
Q psy16312 79 ETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTIDVDEIV 132 (245)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~~~~~~ 132 (245)
... ..-...+.+.+.+.+.|+.+.....+...
T Consensus 229 e~~----------------------~~~~~~e~i~~~~~~~g~~v~~~~~~~Vk 260 (278)
T 3k6r_A 229 EKL----------------------MPREPFETFKRITKEYGYDVEKLNELKIK 260 (278)
T ss_dssp GGG----------------------TTTTTHHHHHHHHHHTTCEEEEEEEEEEE
T ss_pred ccc----------------------cchhHHHHHHHHHHHcCCcEEEEEEEEEE
Confidence 110 00112356677788899987655544433
No 242
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=97.46 E-value=1.2e-05 Score=71.16 Aligned_cols=75 Identities=8% Similarity=-0.052 Sum_probs=55.2
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCC-CCCCccceeeec------ccccccCCh----------------hH
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLP-FAENSVDLLISN------LALHWVNNL----------------PG 56 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~-~~~~~FD~Vis~------~~l~~~~d~----------------~~ 56 (245)
+|+|+.|++.+++++. +.. +.++++|+..++ ..+++||+|++. .++..-++. ..
T Consensus 132 vDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~ 210 (464)
T 3m6w_A 132 NEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKA 210 (464)
T ss_dssp ECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHH
Confidence 7999999999988654 223 889999988776 235899999952 122222222 56
Q ss_pred HHHHHHhhhcCCcEEEEEecC
Q psy16312 57 CFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 57 ~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+|.++.++|||||++++++..
T Consensus 211 iL~~a~~~LkpGG~LvysTCs 231 (464)
T 3m6w_A 211 LLAQASRLLGPGGVLVYSTCT 231 (464)
T ss_dssp HHHHHHTTEEEEEEEEEEESC
T ss_pred HHHHHHHhcCCCcEEEEEecc
Confidence 899999999999999987643
No 243
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=97.45 E-value=0.00012 Score=59.17 Aligned_cols=72 Identities=4% Similarity=-0.074 Sum_probs=53.8
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+++.+++.|++++. + ..++++.++|..+...++..||+|+...+.. .-....+.+..+.|+++|+|+++.
T Consensus 51 vDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~IviagmGg--~lI~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 51 GEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGG--TLIRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp EESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEECH--HHHHHHHHHTGGGGTTCCEEEEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCCch--HHHHHHHHHHHHHhCCCCEEEEEc
Confidence 7999999999998653 1 2459999999887655434699987543321 113567889999999999999984
No 244
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=97.44 E-value=1.3e-05 Score=69.64 Aligned_cols=76 Identities=13% Similarity=0.080 Sum_probs=57.7
Q ss_pred CcChHHHHHhhCCCCC--CC-C-ceeEEEcCCCCCCC----CCCccceeeecc---------cccccCChhHHHHHHHhh
Q psy16312 2 CDNCESILSQAEPPED--TE-V-IYEKKFVDEEHLPF----AENSVDLLISNL---------ALHWVNNLPGCFQQVLKC 64 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~-~-~i~f~~~D~~~l~~----~~~~FD~Vis~~---------~l~~~~d~~~~l~~i~r~ 64 (245)
+|+|+.+++.|++++. +. . +++|+++|+.++.. ..++||+|++.- ......+....+.++.++
T Consensus 249 vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~ 328 (396)
T 3c0k_A 249 VDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQL 328 (396)
T ss_dssp EESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHT
T ss_pred EECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHh
Confidence 7999999999988653 22 2 79999999976521 146899999863 223335567889999999
Q ss_pred hcCCcEEEEEecC
Q psy16312 65 LRQDGVFLASIFG 77 (245)
Q Consensus 65 LkpGG~l~~~~~~ 77 (245)
|+|||.+++++..
T Consensus 329 LkpgG~l~~~~~~ 341 (396)
T 3c0k_A 329 LNEGGILLTFSCS 341 (396)
T ss_dssp EEEEEEEEEEECC
T ss_pred cCCCcEEEEEeCC
Confidence 9999999988643
No 245
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=97.43 E-value=5.2e-05 Score=64.43 Aligned_cols=70 Identities=14% Similarity=0.069 Sum_probs=55.3
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCC
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGG 78 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~ 78 (245)
+|+|+.|++.|++++. + ..+++++++|+.++. ++||+|+++.-- ....++..+.++|+|||++++..+..
T Consensus 222 vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---~~fD~Vi~dpP~----~~~~~l~~~~~~L~~gG~l~~~~~~~ 294 (336)
T 2yx1_A 222 IDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---VKGNRVIMNLPK----FAHKFIDKALDIVEEGGVIHYYTIGK 294 (336)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---CCEEEEEECCTT----TGGGGHHHHHHHEEEEEEEEEEEEES
T ss_pred EECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---CCCcEEEECCcH----hHHHHHHHHHHHcCCCCEEEEEEeec
Confidence 7999999999988643 1 147999999998876 789999986321 23478999999999999998876544
No 246
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=97.43 E-value=4.1e-05 Score=61.72 Aligned_cols=70 Identities=17% Similarity=0.161 Sum_probs=57.2
Q ss_pred CcChHHHHHhhCCCCC-CCCceeEEEcCCCCCCCCCCccceeeecccccccCChh-HHHHHHHhhhcCCcEEE
Q psy16312 2 CDNCESILSQAEPPED-TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLP-GCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~-~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~-~~l~~i~r~LkpGG~l~ 72 (245)
+|+|+.|++.+++.+. .+.+..|.++|....+++ ++||+|+++-++|++.+.. ..+-++...|+++|.++
T Consensus 132 ~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~-~~~DvvLllk~lh~LE~q~~~~~~~ll~aL~~~~vvV 203 (253)
T 3frh_A 132 CDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPA-EAGDLALIFKLLPLLEREQAGSAMALLQSLNTPRMAV 203 (253)
T ss_dssp EESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCC-CBCSEEEEESCHHHHHHHSTTHHHHHHHHCBCSEEEE
T ss_pred EeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCC-CCcchHHHHHHHHHhhhhchhhHHHHHHHhcCCCEEE
Confidence 6999999999998753 236789999999988876 6999999999999995432 34448999999997765
No 247
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=97.33 E-value=0.00026 Score=56.58 Aligned_cols=91 Identities=10% Similarity=0.049 Sum_probs=65.2
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCC-CCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEE-HLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~-~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
+|+++.+++.|++++. + ..+++++++|.. .++.. +.||+|+...+-.- -....+.+....|+|+|+|+++..
T Consensus 45 vDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~-~~~D~IviaG~Gg~--~i~~Il~~~~~~L~~~~~lVlq~~- 120 (225)
T 3kr9_A 45 GEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEET-DQVSVITIAGMGGR--LIARILEEGLGKLANVERLILQPN- 120 (225)
T ss_dssp EESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGG-GCCCEEEEEEECHH--HHHHHHHHTGGGCTTCCEEEEEES-
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccC-cCCCEEEEcCCChH--HHHHHHHHHHHHhCCCCEEEEECC-
Confidence 7999999999998653 1 236999999984 45432 36998886443211 146789999999999999998842
Q ss_pred CCcHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeE
Q psy16312 78 GETLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLT 125 (245)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~ 125 (245)
. ....++++|.+.||.++.
T Consensus 121 --~---------------------------~~~~vr~~L~~~Gf~i~~ 139 (225)
T 3kr9_A 121 --N---------------------------REDDLRIWLQDHGFQIVA 139 (225)
T ss_dssp --S---------------------------CHHHHHHHHHHTTEEEEE
T ss_pred --C---------------------------CHHHHHHHHHHCCCEEEE
Confidence 1 134567778888998754
No 248
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.32 E-value=6.7e-05 Score=61.15 Aligned_cols=70 Identities=10% Similarity=0.084 Sum_probs=57.0
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCCCCCCCccceeeecccccccCChh-HHHHHHHhhhcCCcEEE
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLP-GCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~-~~l~~i~r~LkpGG~l~ 72 (245)
+|+++.|++.+++++.. +.+..+.+.|...-+.+ +.||+|+++-++|++++.. ..+-++...|+|+|.++
T Consensus 162 ~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~-~~~DvaL~lkti~~Le~q~kg~g~~ll~aL~~~~vvV 233 (281)
T 3lcv_B 162 SDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLD-EPADVTLLLKTLPCLETQQRGSGWEVIDIVNSPNIVV 233 (281)
T ss_dssp EESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCC-SCCSEEEETTCHHHHHHHSTTHHHHHHHHSSCSEEEE
T ss_pred EeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCC-CCcchHHHHHHHHHhhhhhhHHHHHHHHHhCCCCEEE
Confidence 69999999999987642 35688999998876654 8899999999999996543 23339999999999876
No 249
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.28 E-value=4e-05 Score=66.54 Aligned_cols=75 Identities=11% Similarity=0.053 Sum_probs=52.4
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCCC-CCCCccceeeecccc---------cccCChhHHHHHHHhhhcCCcE
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHLP-FAENSVDLLISNLAL---------HWVNNLPGCFQQVLKCLRQDGV 70 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l~-~~~~~FD~Vis~~~l---------~~~~d~~~~l~~i~r~LkpGG~ 70 (245)
+|+|+.|++.|++++.. .....+.++|+.++. ...+.||+|++.--. ....+...++..+.++|+|||+
T Consensus 242 vDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~ 321 (393)
T 4dmg_A 242 VDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGF 321 (393)
T ss_dssp EESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEE
T ss_pred EECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCE
Confidence 79999999999987531 122357788987642 213459999985321 1123456789999999999999
Q ss_pred EEEEec
Q psy16312 71 FLASIF 76 (245)
Q Consensus 71 l~~~~~ 76 (245)
+++.+.
T Consensus 322 Lv~~s~ 327 (393)
T 4dmg_A 322 LWLSSC 327 (393)
T ss_dssp EEEEEC
T ss_pred EEEEEC
Confidence 986653
No 250
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.05 E-value=8.6e-05 Score=63.40 Aligned_cols=75 Identities=15% Similarity=0.188 Sum_probs=53.1
Q ss_pred CCcChHHHHHhhCCCCCC-------CC---ceeEEEcCCCCCCC----CCCccceeeecccc-cccCCh-----hHHHHH
Q psy16312 1 MCDNCESILSQAEPPEDT-------EV---IYEKKFVDEEHLPF----AENSVDLLISNLAL-HWVNNL-----PGCFQQ 60 (245)
Q Consensus 1 ~iD~S~~ml~~A~~~~~~-------~~---~i~f~~~D~~~l~~----~~~~FD~Vis~~~l-~~~~d~-----~~~l~~ 60 (245)
++|+++.+++.|++.++. .+ +++++++|+...-- ..++||+|++-..- ..-..+ ..+++.
T Consensus 216 ~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~ 295 (364)
T 2qfm_A 216 MVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRL 295 (364)
T ss_dssp EEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHH
T ss_pred EEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCCceEEEECCCCcccCcCchhhhHHHHHHH
Confidence 379999999999987642 12 69999999976431 24789999986432 111112 355666
Q ss_pred H----HhhhcCCcEEEEEe
Q psy16312 61 V----LKCLRQDGVFLASI 75 (245)
Q Consensus 61 i----~r~LkpGG~l~~~~ 75 (245)
+ +++|+|||.+++..
T Consensus 296 ~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 296 ILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp HHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHhhCCCCcEEEEEc
Confidence 6 89999999998875
No 251
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=96.90 E-value=0.0016 Score=53.27 Aligned_cols=58 Identities=10% Similarity=0.020 Sum_probs=44.2
Q ss_pred ceeEEEcCCCCCCCCCCccceeeeccccc----ccCChh--HHHHHHHhhhcCC-cEEEEEecCC
Q psy16312 21 IYEKKFVDEEHLPFAENSVDLLISNLALH----WVNNLP--GCFQQVLKCLRQD-GVFLASIFGG 78 (245)
Q Consensus 21 ~i~f~~~D~~~l~~~~~~FD~Vis~~~l~----~~~d~~--~~l~~i~r~LkpG-G~l~~~~~~~ 78 (245)
++.+...+++...+.++.||+|+|..+.+ |++... .+|+.+.++|+|| |.|++-+|.+
T Consensus 123 ~ii~~~~~~dv~~l~~~~~DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~KVf~p 187 (277)
T 3evf_A 123 NIITFKDKTDIHRLEPVKCDTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVKVLAP 187 (277)
T ss_dssp GGEEEECSCCTTTSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred CeEEEeccceehhcCCCCccEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEEecCC
Confidence 55666777776777778999999988776 442222 2468889999999 9999998873
No 252
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=96.89 E-value=0.00056 Score=56.76 Aligned_cols=75 Identities=15% Similarity=0.205 Sum_probs=55.4
Q ss_pred CCcChHHHHHhhCCCCC-------CCCceeEEEcCCCCC-CCCCCccceeeecccccccC----ChhHHHHHHHhhhcCC
Q psy16312 1 MCDNCESILSQAEPPED-------TEVIYEKKFVDEEHL-PFAENSVDLLISNLALHWVN----NLPGCFQQVLKCLRQD 68 (245)
Q Consensus 1 ~iD~S~~ml~~A~~~~~-------~~~~i~f~~~D~~~l-~~~~~~FD~Vis~~~l~~~~----d~~~~l~~i~r~LkpG 68 (245)
++|+.+.+++.|++.++ ..++++.+.+|+... .-..++||+|+.-..=..-+ --...++.++++|+||
T Consensus 112 ~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~ 191 (294)
T 3o4f_A 112 MVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPG 191 (294)
T ss_dssp EEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEE
T ss_pred EEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCC
Confidence 47899999999988652 247899999999764 34467899999643211111 1236899999999999
Q ss_pred cEEEEEe
Q psy16312 69 GVFLASI 75 (245)
Q Consensus 69 G~l~~~~ 75 (245)
|.++...
T Consensus 192 Gv~v~q~ 198 (294)
T 3o4f_A 192 GIFVAQN 198 (294)
T ss_dssp EEEEEEE
T ss_pred CEEEEec
Confidence 9998764
No 253
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.85 E-value=0.00014 Score=76.31 Aligned_cols=116 Identities=16% Similarity=0.165 Sum_probs=46.0
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCC-CCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecCCC-
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHL-PFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFGGE- 79 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l-~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~~~- 79 (245)
+|+|+.+.+.|++++.. .++.....|.... ++..++||+|++..+||-.++....|.+++++|||||++++......
T Consensus 1275 td~s~~~~~~a~~~f~~-~di~~~~~d~~~~~~~~~~~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~~~~~ 1353 (2512)
T 2vz8_A 1275 TDRNPQALEAAQAKLEQ-LHVTQGQWDPANPAPGSLGKADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTLLAGH 1353 (2512)
T ss_dssp ECSSSSSTTTTTTTHHH-HTEEEECCCSSCCCC-----CCEEEEECC--------------------CCEEEEEEC----
T ss_pred ecCChHHHHHHHHHhhh-cccccccccccccccCCCCceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEeccccc
Confidence 46777777777777542 2344333454442 34557899999999999889999999999999999999887643221
Q ss_pred cHHHHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeEE
Q psy16312 80 TLYELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLTI 126 (245)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~ 126 (245)
.+......+. .......++.+.+.|.++|..+||..+..
T Consensus 1354 ~~g~~~~~~~--------~~~r~~~~~~~~~~w~~~l~~~gf~~~~~ 1392 (2512)
T 2vz8_A 1354 PLGEMVGFLT--------SPEQGGRHLLSQDQWESLFAGASLHLVAL 1392 (2512)
T ss_dssp ------------------------------CTTTTSSTTTTEEEEEE
T ss_pred cccccccccc--------cccccCCcccCHHHHHHHHHhCCCceeee
Confidence 1111111010 00001123456677888899999987544
No 254
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=96.81 E-value=0.00055 Score=60.30 Aligned_cols=73 Identities=14% Similarity=0.046 Sum_probs=54.5
Q ss_pred CcChHHHHHhhCCCCC--CCC--ceeEEEcCCCCCCCCCCccceeeecccccccCC--h---------------hHHHHH
Q psy16312 2 CDNCESILSQAEPPED--TEV--IYEKKFVDEEHLPFAENSVDLLISNLALHWVNN--L---------------PGCFQQ 60 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~--~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d--~---------------~~~l~~ 60 (245)
+|+++.|++.|+.+.. +.. ++.+.++|....+.. ++||+|+++--+..... . ..++++
T Consensus 214 ~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~~-~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 292 (445)
T 2okc_A 214 VDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEPS-TLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQH 292 (445)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCCS-SCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCccc-CCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHH
Confidence 6899999999986431 111 578899999877654 58999999865543321 1 268999
Q ss_pred HHhhhcCCcEEEEEe
Q psy16312 61 VLKCLRQDGVFLASI 75 (245)
Q Consensus 61 i~r~LkpGG~l~~~~ 75 (245)
+.++|||||++++.+
T Consensus 293 ~~~~Lk~gG~~a~V~ 307 (445)
T 2okc_A 293 MMLMLKTGGRAAVVL 307 (445)
T ss_dssp HHHHEEEEEEEEEEE
T ss_pred HHHHhccCCEEEEEE
Confidence 999999999988776
No 255
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=96.80 E-value=0.0009 Score=58.01 Aligned_cols=73 Identities=4% Similarity=0.014 Sum_probs=53.7
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCCCCCCccceeeec--cccccc--CChhHHHHHHHhhhcC--CcEEE
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLPFAENSVDLLISN--LALHWV--NNLPGCFQQVLKCLRQ--DGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~~~~~~FD~Vis~--~~l~~~--~d~~~~l~~i~r~Lkp--GG~l~ 72 (245)
+|+|+.|++.|++++. + ..+++|+++|+.+++.+ ++||+|+++ +....- .+...+++++.++||+ ||.++
T Consensus 269 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~-~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 347 (393)
T 3k0b_A 269 GDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE-DEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWSVY 347 (393)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC-CCSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTCTTCEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC-CCCCEEEECCCCccccCCchhHHHHHHHHHHHHhcCCCCEEE
Confidence 6999999999998643 2 23599999999998875 699999998 332211 2344567777778876 88877
Q ss_pred EEe
Q psy16312 73 ASI 75 (245)
Q Consensus 73 ~~~ 75 (245)
+.+
T Consensus 348 iit 350 (393)
T 3k0b_A 348 VLT 350 (393)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 256
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=96.74 E-value=0.00055 Score=57.07 Aligned_cols=48 Identities=15% Similarity=0.007 Sum_probs=35.8
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCCCccceeeeccccccc
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAENSVDLLISNLALHWV 51 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~ 51 (245)
+|+|+.|++.|++++. +..+++++++|+..++++ +||+|+++...+|.
T Consensus 70 vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~--~~D~Vv~n~py~~~ 119 (299)
T 2h1r_A 70 IDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFP--KFDVCTANIPYKIS 119 (299)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCC--CCSEEEEECCGGGH
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEECchhhCCcc--cCCEEEEcCCcccc
Confidence 7999999999988652 235799999999988764 89999999877765
No 257
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=96.71 E-value=0.00084 Score=58.32 Aligned_cols=67 Identities=15% Similarity=0.144 Sum_probs=48.8
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeecccccccC----------C------------------
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWVN----------N------------------ 53 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~----------d------------------ 53 (245)
+|+++.|++.| .++.++++|+.+.+. .++||+|++|--..... +
T Consensus 70 vDi~~~~~~~a-------~~~~~~~~D~~~~~~-~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (421)
T 2ih2_A 70 VEIDPKALDLP-------PWAEGILADFLLWEP-GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYN 141 (421)
T ss_dssp EESCTTTCCCC-------TTEEEEESCGGGCCC-SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCC
T ss_pred EECCHHHHHhC-------CCCcEEeCChhhcCc-cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCcc
Confidence 67888887776 368899999987754 37899999963221111 1
Q ss_pred -hhHHHHHHHhhhcCCcEEEEEec
Q psy16312 54 -LPGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 54 -~~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
...+++.+.++|+|||++++.++
T Consensus 142 ~~~~fl~~~~~~Lk~~G~~~~i~p 165 (421)
T 2ih2_A 142 LYGAFLEKAVRLLKPGGVLVFVVP 165 (421)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEC
Confidence 11568899999999999988764
No 258
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=96.66 E-value=0.0018 Score=55.95 Aligned_cols=74 Identities=11% Similarity=0.016 Sum_probs=55.0
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCCCCCCccceeeec--cccccc--CChhHHHHHHHhhhcC--CcEEE
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLPFAENSVDLLISN--LALHWV--NNLPGCFQQVLKCLRQ--DGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~~~~~~FD~Vis~--~~l~~~--~d~~~~l~~i~r~Lkp--GG~l~ 72 (245)
+|+|+.|++.|++++. + ...++|.++|+.+++.+ ++||+|+++ +....- .+...+++++.+.||+ ||.++
T Consensus 262 vDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~-~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 340 (384)
T 3ldg_A 262 FDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN-KINGVLISNPPYGERLLDDKAVDILYNEMGETFAPLKTWSQF 340 (384)
T ss_dssp EESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC-CCSCEEEECCCCTTTTSCHHHHHHHHHHHHHHHTTCTTSEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc-CCcCEEEECCchhhccCCHHHHHHHHHHHHHHHhhCCCcEEE
Confidence 6999999999998653 2 23599999999998876 589999998 332211 2345677778888886 88877
Q ss_pred EEec
Q psy16312 73 ASIF 76 (245)
Q Consensus 73 ~~~~ 76 (245)
+.+.
T Consensus 341 iit~ 344 (384)
T 3ldg_A 341 ILTN 344 (384)
T ss_dssp EEES
T ss_pred EEEC
Confidence 7653
No 259
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=96.59 E-value=0.0012 Score=57.83 Aligned_cols=70 Identities=16% Similarity=0.174 Sum_probs=50.3
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCC----CCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEH----LPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~----l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|++++. +..+++|+++|+++ +++.+++||+|+++---... ..+++.+. .++|++.+++++
T Consensus 314 vD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv~dPPr~g~---~~~~~~l~-~~~p~~ivyvsc 389 (433)
T 1uwv_A 314 VEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVLLDPARAGA---AGVMQQII-KLEPIRIVYVSC 389 (433)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEEECCCTTCC---HHHHHHHH-HHCCSEEEEEES
T ss_pred EeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEEECCCCccH---HHHHHHHH-hcCCCeEEEEEC
Confidence 7999999999988653 23479999999987 34556789999985332211 24555554 478999888885
No 260
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=96.59 E-value=0.0015 Score=57.28 Aligned_cols=69 Identities=13% Similarity=0.098 Sum_probs=49.5
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+|+.|++.|++++.. ..+++|.++|++++.. .+||+|++.-.-.- -...+++.+ +.|+|||.+++++
T Consensus 318 vD~s~~ai~~A~~n~~~ngl~v~~~~~d~~~~~~--~~fD~Vv~dPPr~g--~~~~~~~~l-~~l~p~givyvsc 387 (425)
T 2jjq_A 318 FDSNEFAIEMARRNVEINNVDAEFEVASDREVSV--KGFDTVIVDPPRAG--LHPRLVKRL-NREKPGVIVYVSC 387 (425)
T ss_dssp EESCHHHHHHHHHHHHHHTCCEEEEECCTTTCCC--TTCSEEEECCCTTC--SCHHHHHHH-HHHCCSEEEEEES
T ss_pred EECCHHHHHHHHHHHHHcCCcEEEEECChHHcCc--cCCCEEEEcCCccc--hHHHHHHHH-HhcCCCcEEEEEC
Confidence 79999999999987541 1128999999998753 28999998543111 112455555 4699999999985
No 261
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=96.55 E-value=0.00019 Score=58.06 Aligned_cols=47 Identities=11% Similarity=0.071 Sum_probs=36.4
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCC-Cccceeeeccccc
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAE-NSVDLLISNLALH 49 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~-~~FD~Vis~~~l~ 49 (245)
+|+|+.|++.|+++.....+++++++|+.++++++ ..| .|+++...+
T Consensus 58 vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~~~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 58 IEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFPKNQSY-KIFGNIPYN 105 (244)
T ss_dssp ECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCCSSCCC-EEEEECCGG
T ss_pred EECCHHHHHHHHHhhccCCCeEEEEChHHhCCcccCCCe-EEEEeCCcc
Confidence 79999999999987654468999999999998864 455 566665443
No 262
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=96.44 E-value=0.00092 Score=57.80 Aligned_cols=73 Identities=11% Similarity=0.139 Sum_probs=54.8
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCCCCCCccceeeecccccc-c---CChhHHHHHHHhhhcC--CcEEE
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLPFAENSVDLLISNLALHW-V---NNLPGCFQQVLKCLRQ--DGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~-~---~d~~~~l~~i~r~Lkp--GG~l~ 72 (245)
+|+|+.|++.|++++. + ..+++|.++|+.+++.+ ++||+|+++--..- + .+...+++++.++||+ ||.++
T Consensus 263 vDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~-~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~lk~~~g~~~~ 341 (385)
T 3ldu_A 263 YDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE-DEFGFIITNPPYGERLEDKDSVKQLYKELGYAFRKLKNWSYY 341 (385)
T ss_dssp EESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS-CBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHHHTSBSCEEE
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC-CCCcEEEECCCCcCccCCHHHHHHHHHHHHHHHhhCCCCEEE
Confidence 6999999999998653 1 23699999999998775 68999999754321 1 2345677788888887 88777
Q ss_pred EEe
Q psy16312 73 ASI 75 (245)
Q Consensus 73 ~~~ 75 (245)
+.+
T Consensus 342 iit 344 (385)
T 3ldu_A 342 LIT 344 (385)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 263
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=96.18 E-value=0.00074 Score=57.99 Aligned_cols=69 Identities=7% Similarity=-0.042 Sum_probs=49.7
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCC--CCC--------------CccceeeecccccccCChhH--HHHHH
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLP--FAE--------------NSVDLLISNLALHWVNNLPG--CFQQV 61 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~--~~~--------------~~FD~Vis~~~l~~~~d~~~--~l~~i 61 (245)
+|+|+.|++.|++++. +..+++|+++|++++. +.. .+||+|++ ||.. +..++
T Consensus 241 vd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~--------dPPr~g~~~~~ 312 (369)
T 3bt7_A 241 TEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFV--------DPPRSGLDSET 312 (369)
T ss_dssp ECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEE--------CCCTTCCCHHH
T ss_pred EECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccccccccccccCCCCEEEE--------CcCccccHHHH
Confidence 7999999999988653 2247999999997642 211 37999986 3332 45678
Q ss_pred HhhhcCCcEEEEEecCC
Q psy16312 62 LKCLRQDGVFLASIFGG 78 (245)
Q Consensus 62 ~r~LkpGG~l~~~~~~~ 78 (245)
.++|+|+|+++.....+
T Consensus 313 ~~~l~~~g~ivyvsc~p 329 (369)
T 3bt7_A 313 EKMVQAYPRILYISCNP 329 (369)
T ss_dssp HHHHTTSSEEEEEESCH
T ss_pred HHHHhCCCEEEEEECCH
Confidence 88899999887665443
No 264
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=96.07 E-value=0.0023 Score=53.22 Aligned_cols=50 Identities=12% Similarity=0.060 Sum_probs=42.3
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCCccceeeeccccccc
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAENSVDLLISNLALHWV 51 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~ 51 (245)
+|+++.|++.|++++....+++++++|+..+++++.+||+|+++...++.
T Consensus 78 VEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~fD~Iv~NlPy~is 127 (295)
T 3gru_A 78 IEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLDFNKVVANLPYQIS 127 (295)
T ss_dssp EESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSCCSEEEEECCGGGH
T ss_pred EECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCCccEEEEeCccccc
Confidence 79999999999887644468999999999999887789999999776554
No 265
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=95.54 E-value=0.015 Score=54.17 Aligned_cols=74 Identities=11% Similarity=0.068 Sum_probs=49.5
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCC--CCCCccceeeec--ccccccC--ChhHH---HHHHHhhhcCCc
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLP--FAENSVDLLISN--LALHWVN--NLPGC---FQQVLKCLRQDG 69 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~--~~~~~FD~Vis~--~~l~~~~--d~~~~---l~~i~r~LkpGG 69 (245)
+|+++.|++.|+.++. + ...++|.++|+.++. ...++||+|++| +....-. +...+ +.++.+.+.|||
T Consensus 262 ~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~l~~~lk~~~~g~ 341 (703)
T 3v97_A 262 SDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGERLDSEPALIALHSLLGRIMKNQFGGW 341 (703)
T ss_dssp EESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC---CCHHHHHHHHHHHHHHHHHCTTC
T ss_pred EECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCccccccchhHHHHHHHHHHHHHHhhCCCC
Confidence 6999999999998643 2 234899999998873 334489999998 4332211 22233 444555556899
Q ss_pred EEEEEe
Q psy16312 70 VFLASI 75 (245)
Q Consensus 70 ~l~~~~ 75 (245)
.+++.+
T Consensus 342 ~~~ilt 347 (703)
T 3v97_A 342 NLSLFS 347 (703)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 987765
No 266
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.54 E-value=0.0039 Score=51.80 Aligned_cols=56 Identities=20% Similarity=0.382 Sum_probs=40.2
Q ss_pred CceeEEEcCCCC-CC-CCCCccceeeeccccc--------------------ccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 20 VIYEKKFVDEEH-LP-FAENSVDLLISNLALH--------------------WVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 20 ~~i~f~~~D~~~-l~-~~~~~FD~Vis~~~l~--------------------~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
.++.++++|+.+ ++ +++++||+|+++=-.. |+......+.+++++|||||.+++..
T Consensus 20 ~~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~~ 97 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFPEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIVV 97 (297)
T ss_dssp -CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCEEEECcHHHHHhhCCCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 356899999876 33 4568999999863221 22223467889999999999998875
No 267
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=95.49 E-value=0.0031 Score=54.53 Aligned_cols=70 Identities=9% Similarity=0.010 Sum_probs=52.5
Q ss_pred CcChHHHHHhhCCCCC--CCC-c-eeEEEcCCCCCC--CCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPED--TEV-I-YEKKFVDEEHLP--FAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~-~-i~f~~~D~~~l~--~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+|+++.+++.+++++. +.. + ++++++|+..+- ...+.||+|++.- ...+..++..+.+.|+|||+++++.
T Consensus 83 vDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~lDP----~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 83 NDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDLDP----FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp ECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEECC----SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred EECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEECC----CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 7999999999998653 222 3 899999986531 1136899999854 1234578999999999999988876
No 268
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=95.46 E-value=0.006 Score=55.07 Aligned_cols=74 Identities=7% Similarity=-0.092 Sum_probs=52.4
Q ss_pred CcChHHHHHhhCCCC--CCCCc-----eeEEEcCCCCCC-CCCCccceeeecccccccCC--------------hhHHHH
Q psy16312 2 CDNCESILSQAEPPE--DTEVI-----YEKKFVDEEHLP-FAENSVDLLISNLALHWVNN--------------LPGCFQ 59 (245)
Q Consensus 2 iD~S~~ml~~A~~~~--~~~~~-----i~f~~~D~~~l~-~~~~~FD~Vis~~~l~~~~d--------------~~~~l~ 59 (245)
+|+++.|++.|+.+. .+..+ +.+.++|....+ ...+.||+|++|--+..... ...++.
T Consensus 217 iEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~ 296 (541)
T 2ar0_A 217 LELVPGTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQ 296 (541)
T ss_dssp EESCHHHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHH
T ss_pred EcCCHHHHHHHHHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHH
Confidence 588999999987642 12122 678899986643 33478999999754433221 126899
Q ss_pred HHHhhhcCCcEEEEEe
Q psy16312 60 QVLKCLRQDGVFLASI 75 (245)
Q Consensus 60 ~i~r~LkpGG~l~~~~ 75 (245)
.+.+.|||||++++.+
T Consensus 297 ~~l~~Lk~gGr~a~V~ 312 (541)
T 2ar0_A 297 HIIETLHPGGRAAVVV 312 (541)
T ss_dssp HHHHHEEEEEEEEEEE
T ss_pred HHHHHhCCCCEEEEEe
Confidence 9999999999988776
No 269
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=95.46 E-value=0.0083 Score=50.17 Aligned_cols=74 Identities=11% Similarity=-0.069 Sum_probs=49.2
Q ss_pred CcChHHHHHhhCCCCC--CCCceeEEEcCCCCCCCCC---Cccceeeec-----c-ccc------cc-----CCh-----
Q psy16312 2 CDNCESILSQAEPPED--TEVIYEKKFVDEEHLPFAE---NSVDLLISN-----L-ALH------WV-----NNL----- 54 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~~~~i~f~~~D~~~l~~~~---~~FD~Vis~-----~-~l~------~~-----~d~----- 54 (245)
+|+++.+++.+++++. +..+++++++|+..++... ++||.|++. . ++. |. .+.
T Consensus 133 ~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~ 212 (309)
T 2b9e_A 133 FDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAG 212 (309)
T ss_dssp EESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEEECCCCCC------------------CCHHHHHH
T ss_pred EeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHH
Confidence 6999999999988653 2247999999998876432 579999962 1 111 11 011
Q ss_pred --hHHHHHHHhhhcCCcEEEEEec
Q psy16312 55 --PGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 55 --~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
...|..+.++|+ ||+++.++.
T Consensus 213 ~Q~~iL~~a~~~l~-gG~lvYsTC 235 (309)
T 2b9e_A 213 FQQRALCHALTFPS-LQRLVYSTC 235 (309)
T ss_dssp HHHHHHHHHTTCTT-CCEEEEEES
T ss_pred HHHHHHHHHHhccC-CCEEEEECC
Confidence 135777777786 999887754
No 270
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=95.15 E-value=0.016 Score=45.34 Aligned_cols=68 Identities=9% Similarity=0.026 Sum_probs=47.9
Q ss_pred CcChHHHHHhhCCCCC--C---CCceeEEEcCCCCC---------------C--------C-CCCccceeeecccccccC
Q psy16312 2 CDNCESILSQAEPPED--T---EVIYEKKFVDEEHL---------------P--------F-AENSVDLLISNLALHWVN 52 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~---~~~i~f~~~D~~~l---------------~--------~-~~~~FD~Vis~~~l~~~~ 52 (245)
||.++.+.+.|++.+. + ..+|+++.+|+.+. + . ..++||+|+.-.-.
T Consensus 57 vE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k---- 132 (202)
T 3cvo_A 57 VESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRF---- 132 (202)
T ss_dssp EESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSS----
T ss_pred EeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCC----
Confidence 5778888888887432 1 34799999997542 2 1 23789999975421
Q ss_pred ChhHHHHHHHhhhcCCcEEEEE
Q psy16312 53 NLPGCFQQVLKCLRQDGVFLAS 74 (245)
Q Consensus 53 d~~~~l~~i~r~LkpGG~l~~~ 74 (245)
....+..+.+.|+|||++++.
T Consensus 133 -~~~~~~~~l~~l~~GG~Iv~D 153 (202)
T 3cvo_A 133 -RVGCALATAFSITRPVTLLFD 153 (202)
T ss_dssp -HHHHHHHHHHHCSSCEEEEET
T ss_pred -chhHHHHHHHhcCCCeEEEEe
Confidence 235566677999999999775
No 271
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=94.77 E-value=0.0021 Score=55.33 Aligned_cols=70 Identities=10% Similarity=0.049 Sum_probs=51.8
Q ss_pred CcChHHHHHhhCCCCC-----------------CCCceeEEEcCCCCCCC-CCCccceeeecccccccCChhHHHHHHHh
Q psy16312 2 CDNCESILSQAEPPED-----------------TEVIYEKKFVDEEHLPF-AENSVDLLISNLALHWVNNLPGCFQQVLK 63 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~-----------------~~~~i~f~~~D~~~l~~-~~~~FD~Vis~~~l~~~~d~~~~l~~i~r 63 (245)
+|+++.+++.|++++. +..++++.++|+..+.. ..+.||+|++.- . ......+..+.+
T Consensus 77 vDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~~~~~~fD~I~lDP-~---~~~~~~l~~a~~ 152 (378)
T 2dul_A 77 NDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAERHRYFHFIDLDP-F---GSPMEFLDTALR 152 (378)
T ss_dssp EESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHSTTCEEEEEECC-S---SCCHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHHhccCCCCEEEeCC-C---CCHHHHHHHHHH
Confidence 6999999999988542 11348899999876431 136799999532 1 134678999999
Q ss_pred hhcCCcEEEEEe
Q psy16312 64 CLRQDGVFLASI 75 (245)
Q Consensus 64 ~LkpGG~l~~~~ 75 (245)
.|||||.++++.
T Consensus 153 ~lk~gG~l~vt~ 164 (378)
T 2dul_A 153 SAKRRGILGVTA 164 (378)
T ss_dssp HEEEEEEEEEEE
T ss_pred hcCCCCEEEEEe
Confidence 999999988875
No 272
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=94.46 E-value=0.03 Score=45.80 Aligned_cols=57 Identities=9% Similarity=0.036 Sum_probs=38.8
Q ss_pred ceeEEEcCCCCCCCCCCccceeeeccccc----ccCChh--HHHHHHHhhhcCC--cEEEEEecC
Q psy16312 21 IYEKKFVDEEHLPFAENSVDLLISNLALH----WVNNLP--GCFQQVLKCLRQD--GVFLASIFG 77 (245)
Q Consensus 21 ~i~f~~~D~~~l~~~~~~FD~Vis~~~l~----~~~d~~--~~l~~i~r~LkpG--G~l~~~~~~ 77 (245)
++.+...+++...+..+.+|+|+|-.+.. +++... .+|.-+..+|+|| |.|++-+|.
T Consensus 139 ~ii~~~~~~dv~~l~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~A~~~Lk~g~~G~Fv~KvF~ 203 (282)
T 3gcz_A 139 NLIRFKDKTDVFNMEVIPGDTLLCDIGESSPSIAVEEQRTLRVLNCAKQWLQEGNYTEFCIKVLC 203 (282)
T ss_dssp GGEEEECSCCGGGSCCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEESC
T ss_pred ceEEeeCCcchhhcCCCCcCEEEecCccCCCChHHHHHHHHHHHHHHHHHcCCCCCCcEEEEEec
Confidence 44444444443445568999999988776 332111 3466778999999 999999877
No 273
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=94.42 E-value=0.008 Score=48.75 Aligned_cols=46 Identities=11% Similarity=-0.004 Sum_probs=36.7
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCC-----Cccceeeeccc
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAE-----NSVDLLISNLA 47 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~-----~~FD~Vis~~~ 47 (245)
+|+++.|++.++++.....+++++++|+..+++++ +..|.|++|.-
T Consensus 49 vEid~~~~~~a~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~~~vvsNlP 99 (252)
T 1qyr_A 49 IELDRDLAARLQTHPFLGPKLTIYQQDAMTFNFGELAEKMGQPLRVFGNLP 99 (252)
T ss_dssp ECCCHHHHHHHHTCTTTGGGEEEECSCGGGCCHHHHHHHHTSCEEEEEECC
T ss_pred EECCHHHHHHHHHHhccCCceEEEECchhhCCHHHhhcccCCceEEEECCC
Confidence 79999999999998765468999999999988642 23468888764
No 274
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=94.30 E-value=0.016 Score=53.07 Aligned_cols=69 Identities=14% Similarity=0.139 Sum_probs=46.6
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCCCCCCccceeeecccccc--cCChhHHHHHHHhhhcCCcEEE
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLPFAENSVDLLISNLALHW--VNNLPGCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~--~~d~~~~l~~i~r~LkpGG~l~ 72 (245)
|+.|+ |...|++... + ...|+++.+|++++.++ +..|+|||=.+=.. -.....+|....+.|||||.++
T Consensus 391 VEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP-EKVDIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimi 464 (637)
T 4gqb_A 391 VEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAP-EKADIIVSELLGSFADNELSPECLDGAQHFLKDDGVSI 464 (637)
T ss_dssp EESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCS-SCEEEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEE
T ss_pred EECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCC-cccCEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEc
Confidence 44554 4455544221 1 35699999999998877 78999998432111 1233467888899999999874
No 275
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=94.30 E-value=0.012 Score=49.52 Aligned_cols=56 Identities=27% Similarity=0.338 Sum_probs=41.0
Q ss_pred CceeEEEcCCCC-CC-CCCCccceeeecc--cc------------cccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 20 VIYEKKFVDEEH-LP-FAENSVDLLISNL--AL------------HWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 20 ~~i~f~~~D~~~-l~-~~~~~FD~Vis~~--~l------------~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
....++++|+.+ +. +++++||+|++.= .. .|+......+.+++++|+|||.+++..
T Consensus 13 ~~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~~ 84 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFPEESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVDF 84 (323)
T ss_dssp SSEEEEESCHHHHGGGSCSSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCCCCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEEE
Confidence 457788999864 43 5578999999852 11 122235688999999999999998875
No 276
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=93.58 E-value=0.022 Score=48.78 Aligned_cols=75 Identities=15% Similarity=0.151 Sum_probs=50.7
Q ss_pred CCcChHHHHHhhCCCCCC----------CCceeEEEcCCCCC----CCCCCccceeeeccccccc-CCh---------hH
Q psy16312 1 MCDNCESILSQAEPPEDT----------EVIYEKKFVDEEHL----PFAENSVDLLISNLALHWV-NNL---------PG 56 (245)
Q Consensus 1 ~iD~S~~ml~~A~~~~~~----------~~~i~f~~~D~~~l----~~~~~~FD~Vis~~~l~~~-~d~---------~~ 56 (245)
++|+.+.+++.|++.++. .++++.+++|+... .-..++||+|+.-..-... .++ ..
T Consensus 233 ~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~e 312 (381)
T 3c6k_A 233 MVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGREFDYVINDLTAVPISTSPEEDSTWEFLRL 312 (381)
T ss_dssp EEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCCEEEEEEECCSSCCCCC----CHHHHHHH
T ss_pred EEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccCceeEEEECCCCCcccCcccCcchHHHHHH
Confidence 478999999999875431 24578888988542 1124689999974321111 111 35
Q ss_pred HHHHHHhhhcCCcEEEEEe
Q psy16312 57 CFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 57 ~l~~i~r~LkpGG~l~~~~ 75 (245)
+++.++++|+|||.++...
T Consensus 313 Fy~~~~~~L~p~GVlv~Q~ 331 (381)
T 3c6k_A 313 ILDLSMKVLKQDGKYFTQG 331 (381)
T ss_dssp HHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCCEEEEec
Confidence 6889999999999998764
No 277
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=93.11 E-value=0.11 Score=46.90 Aligned_cols=75 Identities=13% Similarity=0.050 Sum_probs=52.0
Q ss_pred CcChHHHHHhhCCCC--CCC--CceeEEEcCCCCC--C-CCCCccceeeec--ccccccC------Ch------------
Q psy16312 2 CDNCESILSQAEPPE--DTE--VIYEKKFVDEEHL--P-FAENSVDLLISN--LALHWVN------NL------------ 54 (245)
Q Consensus 2 iD~S~~ml~~A~~~~--~~~--~~i~f~~~D~~~l--~-~~~~~FD~Vis~--~~l~~~~------d~------------ 54 (245)
+|+++.++..|+.+. .+. .++.+.++|.... | .....||+|++| +...|-. ++
T Consensus 254 ~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s 333 (542)
T 3lkd_A 254 QELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKS 333 (542)
T ss_dssp EESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTT
T ss_pred EECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCc
Confidence 578888888887642 111 3678899998765 4 346789999987 2223311 10
Q ss_pred ---hHHHHHHHhhhc-CCcEEEEEec
Q psy16312 55 ---PGCFQQVLKCLR-QDGVFLASIF 76 (245)
Q Consensus 55 ---~~~l~~i~r~Lk-pGG~l~~~~~ 76 (245)
-.++..+.+.|+ |||++++.++
T Consensus 334 ~~~~~Fl~~~l~~Lk~~gGr~a~VlP 359 (542)
T 3lkd_A 334 KADFAFLLHGYYHLKQDNGVMAIVLP 359 (542)
T ss_dssp CCHHHHHHHHHHTBCTTTCEEEEEEE
T ss_pred hhhHHHHHHHHHHhCCCceeEEEEec
Confidence 137999999999 9999887763
No 278
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=93.02 E-value=0.027 Score=45.71 Aligned_cols=45 Identities=9% Similarity=0.137 Sum_probs=36.1
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCC----CCccceeeeccc
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFA----ENSVDLLISNLA 47 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~----~~~FD~Vis~~~ 47 (245)
+|+++.|++.+++++....+++++++|+..++++ ++.|| |++|.-
T Consensus 57 vEid~~~~~~~~~~~~~~~~v~~i~~D~~~~~~~~~~~~~~~~-vv~NlP 105 (255)
T 3tqs_A 57 VEIDRDLVAFLQKKYNQQKNITIYQNDALQFDFSSVKTDKPLR-VVGNLP 105 (255)
T ss_dssp EECCHHHHHHHHHHHTTCTTEEEEESCTTTCCGGGSCCSSCEE-EEEECC
T ss_pred EECCHHHHHHHHHHHhhCCCcEEEEcchHhCCHHHhccCCCeE-EEecCC
Confidence 7999999999998765446899999999998864 25688 777643
No 279
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=92.69 E-value=0.41 Score=39.44 Aligned_cols=56 Identities=9% Similarity=0.084 Sum_probs=37.6
Q ss_pred ceeEEEcCCCCCCCCCCccceeeecccccccCCh-------hHHHHHHHhhhcCC-cEEEEEecC
Q psy16312 21 IYEKKFVDEEHLPFAENSVDLLISNLALHWVNNL-------PGCFQQVLKCLRQD-GVFLASIFG 77 (245)
Q Consensus 21 ~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~-------~~~l~~i~r~LkpG-G~l~~~~~~ 77 (245)
++.....+++...+..+.||+|+|..+.. ...+ ..+|.-+..+|+|| |.|++-+|.
T Consensus 130 ~iv~~~~~~di~~l~~~~~DlVlsD~APn-sG~~~~D~~rs~~LL~~A~~~LkpG~G~FV~KvF~ 193 (300)
T 3eld_A 130 NIVKFKDKSNVFTMPTEPSDTLLCDIGES-SSNPLVERDRTMKVLENFERWKHVNTENFCVKVLA 193 (300)
T ss_dssp GGEEEECSCCTTTSCCCCCSEEEECCCCC-CSSHHHHHHHHHHHHHHHHHHCCTTCCEEEEEESS
T ss_pred ceEEeecCceeeecCCCCcCEEeecCcCC-CCCHHHHHHHHHHHHHHHHHHhcCCCCcEEEEecc
Confidence 33333333333344567899999987766 3322 13467778999999 999998876
No 280
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=92.25 E-value=0.047 Score=44.32 Aligned_cols=53 Identities=17% Similarity=0.208 Sum_probs=36.6
Q ss_pred CceeEEEcCCCC-CCCCCC----ccceeeec-ccccccCC--hhHHHHHHHhhhcCCcEEE
Q psy16312 20 VIYEKKFVDEEH-LPFAEN----SVDLLISN-LALHWVNN--LPGCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 20 ~~i~f~~~D~~~-l~~~~~----~FD~Vis~-~~l~~~~d--~~~~l~~i~r~LkpGG~l~ 72 (245)
.++++..+|+.+ ++..++ .||+|+.- ++-.-.++ ...+++.++++|+|||+|+
T Consensus 150 ~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~ 210 (257)
T 2qy6_A 150 VTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLA 210 (257)
T ss_dssp EEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEE
T ss_pred eEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEE
Confidence 467889999876 553222 79999873 22211111 2468999999999999987
No 281
>2hwk_A Helicase NSP2; rossman fold, alpha/beta/alpha, multi-domain, hydrolase; 2.45A {Venezuelan equine encephalitis virus}
Probab=91.85 E-value=0.31 Score=39.81 Aligned_cols=43 Identities=12% Similarity=0.141 Sum_probs=31.8
Q ss_pred CccceeeecccccccC-------Chh----HHHHHHHhhhcCCcEEEEEecCCC
Q psy16312 37 NSVDLLISNLALHWVN-------NLP----GCFQQVLKCLRQDGVFLASIFGGE 79 (245)
Q Consensus 37 ~~FD~Vis~~~l~~~~-------d~~----~~l~~i~r~LkpGG~l~~~~~~~~ 79 (245)
+.+|+|+|.+.-.... |.. -++.....+|+|||.|++-.|+..
T Consensus 205 ~k~DvV~SDMApn~sGh~yqQC~DHarii~Lal~fA~~vLkPGGtfV~Kvygga 258 (320)
T 2hwk_A 205 PKYDIIFVNVRTPYKYHHYQQCEDHAIKLSMLTKKACLHLNPGGTCVSIGYGYA 258 (320)
T ss_dssp CCEEEEEEECCCCCCSCHHHHHHHHHHHHHHTHHHHGGGEEEEEEEEEEECCCC
T ss_pred CcCCEEEEcCCCCCCCccccccchHHHHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 6799999977543332 222 256778899999999999988765
No 282
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=91.40 E-value=0.044 Score=44.86 Aligned_cols=47 Identities=21% Similarity=0.229 Sum_probs=38.9
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCC-Cccceeeeccccc
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAE-NSVDLLISNLALH 49 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~-~~FD~Vis~~~l~ 49 (245)
+|+++.|++.+++++.. .+++++++|+..+++++ ..||.|++|.-.+
T Consensus 74 vEid~~~~~~l~~~~~~-~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 74 IEKDLRLRPVLEETLSG-LPVRLVFQDALLYPWEEVPQGSLLVANLPYH 121 (271)
T ss_dssp EESCGGGHHHHHHHTTT-SSEEEEESCGGGSCGGGSCTTEEEEEEECSS
T ss_pred EECCHHHHHHHHHhcCC-CCEEEEECChhhCChhhccCccEEEecCccc
Confidence 79999999999987764 58999999999988763 2689999986543
No 283
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=91.22 E-value=0.13 Score=46.26 Aligned_cols=74 Identities=14% Similarity=0.131 Sum_probs=50.1
Q ss_pred CcChHHHHHhhCCCCC--C-CCceeEEEcCCCCCC-CCCCccceeeeccccc---ccC----------------------
Q psy16312 2 CDNCESILSQAEPPED--T-EVIYEKKFVDEEHLP-FAENSVDLLISNLALH---WVN---------------------- 52 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~--~-~~~i~f~~~D~~~l~-~~~~~FD~Vis~~~l~---~~~---------------------- 52 (245)
+|+++.++..|+.+.. + ..++.+.++|....+ +.+..||+|++|=-+. |..
T Consensus 289 ~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~ 368 (544)
T 3khk_A 289 QESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTP 368 (544)
T ss_dssp CCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCC
T ss_pred EeCCHHHHHHHHHHHHHhCCCcccceeccchhcCcccccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccC
Confidence 6889999998876431 1 123444778876554 4457899999964332 211
Q ss_pred C---h-hHHHHHHHhhhcCCcEEEEEe
Q psy16312 53 N---L-PGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 53 d---~-~~~l~~i~r~LkpGG~l~~~~ 75 (245)
. . -.++..+.+.|+|||++++.+
T Consensus 369 ~~~~~~~~Fl~~~l~~Lk~gGr~aiVl 395 (544)
T 3khk_A 369 PTGNANFAWMLHMLYHLAPTGSMALLL 395 (544)
T ss_dssp CTTCTHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCcchhHHHHHHHHHHhccCceEEEEe
Confidence 0 0 157999999999999988776
No 284
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=90.74 E-value=0.68 Score=38.49 Aligned_cols=103 Identities=11% Similarity=0.080 Sum_probs=61.4
Q ss_pred CceeEEEcCCCCCC---------CCCCccceeeecccccccCC--hhHHHHHHHhhhcCCcEEEEEecCCC-cHHH--HH
Q psy16312 20 VIYEKKFVDEEHLP---------FAENSVDLLISNLALHWVNN--LPGCFQQVLKCLRQDGVFLASIFGGE-TLYE--LR 85 (245)
Q Consensus 20 ~~i~f~~~D~~~l~---------~~~~~FD~Vis~~~l~~~~d--~~~~l~~i~r~LkpGG~l~~~~~~~~-~~~~--~~ 85 (245)
.+..++.+|+.+ . +..+.-=++++-.+|+|+++ ...+++.+...+.||+.+++....++ .+.. ..
T Consensus 153 ~~~~~v~~Dl~d-~~~~~l~~~g~d~~~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~~~~~~~~~~~~ 231 (310)
T 2uyo_A 153 ADRREVPIDLRQ-DWPPALRSAGFDPSARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSPLHGDEWREQMQ 231 (310)
T ss_dssp SEEEEEECCTTS-CHHHHHHHTTCCTTSCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCCTTCSHHHHHHH
T ss_pred CCeEEEecchHh-hHHHHHHhccCCCCCCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecCCCCcchhHHHH
Confidence 568888999986 3 22233457888999999964 44778888888899999999876543 2211 11
Q ss_pred HHHHHHHHHhcC--C-CC-CcccCCCC-HHHHHHHHHhCCCeee
Q psy16312 86 SAVHLAEMERRG--G-VA-SHISPFTQ-IRDVGSLLTRAGFNML 124 (245)
Q Consensus 86 ~~~~~~~~~~~~--~-~~-~~~~~~~~-~~~~~~~l~~aGF~~~ 124 (245)
.... ..+...+ . .. .......+ .+++.+.|.+.||+.+
T Consensus 232 ~~~~-~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~f~~~G~~~~ 274 (310)
T 2uyo_A 232 LRFR-RVSDALGFEQAVDVQELIYHDENRAVVADWLNRHGWRAT 274 (310)
T ss_dssp HHHH-HHHC-----------CCTTCCTTCCCHHHHHTTTTEEEE
T ss_pred HHHH-HHHHHcCCcCCCCccccccCCCChHHHHHHHHHCcCccc
Confidence 1110 0011111 0 00 11112235 6788999999999864
No 285
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=90.50 E-value=0.3 Score=40.60 Aligned_cols=74 Identities=12% Similarity=0.162 Sum_probs=49.2
Q ss_pred ceeEEEcCCCC-CC-CCCCccceeeecccccccCCh----hHHHHHHHhhhcCCcEEEEEecCCCcHHHHHHHHHHHHHH
Q psy16312 21 IYEKKFVDEEH-LP-FAENSVDLLISNLALHWVNNL----PGCFQQVLKCLRQDGVFLASIFGGETLYELRSAVHLAEME 94 (245)
Q Consensus 21 ~i~f~~~D~~~-l~-~~~~~FD~Vis~~~l~~~~d~----~~~l~~i~r~LkpGG~l~~~~~~~~~~~~~~~~~~~~~~~ 94 (245)
.+++..+|+.+ ++ +.+..||+|+.- +|---.+| ..+++.++++++|||.|+ +++.
T Consensus 167 ~L~l~~GDa~~~l~~l~~~~~Da~flD-gFsP~kNPeLWs~e~f~~l~~~~~pgg~la--TYta---------------- 227 (308)
T 3vyw_A 167 SLKVLLGDARKRIKEVENFKADAVFHD-AFSPYKNPELWTLDFLSLIKERIDEKGYWV--SYSS---------------- 227 (308)
T ss_dssp EEEEEESCHHHHGGGCCSCCEEEEEEC-CSCTTTSGGGGSHHHHHHHHTTEEEEEEEE--ESCC----------------
T ss_pred EEEEEechHHHHHhhhcccceeEEEeC-CCCcccCcccCCHHHHHHHHHHhCCCcEEE--EEeC----------------
Confidence 45677888864 33 344579999852 22222244 379999999999999876 2211
Q ss_pred hcCCCCCcccCCCCHHHHHHHHHhCCCeeeEEE
Q psy16312 95 RRGGVASHISPFTQIRDVGSLLTRAGFNMLTID 127 (245)
Q Consensus 95 ~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~~~ 127 (245)
...+++.|+++||++....
T Consensus 228 --------------ag~VRR~L~~aGF~V~k~~ 246 (308)
T 3vyw_A 228 --------------SLSVRKSLLTLGFKVGSSR 246 (308)
T ss_dssp --------------CHHHHHHHHHTTCEEEEEE
T ss_pred --------------cHHHHHHHHHCCCEEEecC
Confidence 2346778889999986554
No 286
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=89.84 E-value=0.027 Score=48.87 Aligned_cols=44 Identities=9% Similarity=-0.031 Sum_probs=34.4
Q ss_pred CcChHHHHHhhCCCCC----CCCceeEEEcCCCCC-CC-CCCccceeeec
Q psy16312 2 CDNCESILSQAEPPED----TEVIYEKKFVDEEHL-PF-AENSVDLLISN 45 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~----~~~~i~f~~~D~~~l-~~-~~~~FD~Vis~ 45 (245)
+|+|+.|++.|++++. +..+++|+++|+.+. +. .+++||+|++.
T Consensus 121 VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lD 170 (410)
T 3ll7_A 121 IERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVD 170 (410)
T ss_dssp EESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEEC
T ss_pred EECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEEC
Confidence 7999999999998754 225799999999874 32 23589999984
No 287
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=89.03 E-value=0.05 Score=50.23 Aligned_cols=52 Identities=19% Similarity=0.196 Sum_probs=39.4
Q ss_pred CceeEEEcCCCCCCCC-----CCccceeeecccccccCC---hhHHHHHHHhhhcCCcEEE
Q psy16312 20 VIYEKKFVDEEHLPFA-----ENSVDLLISNLALHWVNN---LPGCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 20 ~~i~f~~~D~~~l~~~-----~~~FD~Vis~~~l~~~~d---~~~~l~~i~r~LkpGG~l~ 72 (245)
..|+++.+|++++.++ .+..|+|||-.+= .+-+ ....|..+.+.|||||.++
T Consensus 472 d~VtVI~gd~eev~lp~~~~~~ekVDIIVSElmG-sfl~nEL~pe~Ld~v~r~Lkp~Gi~i 531 (745)
T 3ua3_A 472 RRVTIIESDMRSLPGIAKDRGFEQPDIIVSELLG-SFGDNELSPECLDGVTGFLKPTTISI 531 (745)
T ss_dssp TCSEEEESCGGGHHHHHHHTTCCCCSEEEECCCB-TTBGGGSHHHHHHTTGGGSCTTCEEE
T ss_pred CeEEEEeCchhhcccccccCCCCcccEEEEeccc-cccchhccHHHHHHHHHhCCCCcEEE
Confidence 4599999999998762 4789999996542 2222 2368888899999999865
No 288
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=88.80 E-value=0.43 Score=39.42 Aligned_cols=54 Identities=19% Similarity=0.095 Sum_probs=36.8
Q ss_pred eEEEcCCCCCCCCCCccceeeecccccccC--C---------hhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 23 EKKFVDEEHLPFAENSVDLLISNLALHWVN--N---------LPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 23 ~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~--d---------~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
.++++|+..+... +.||+|+|=++-.-.. | -+.++.-+.++|+|||.|++=++-
T Consensus 155 ~~IqGD~~~~~~~-~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVKVFQ 219 (344)
T 3r24_A 155 STLIGDCATVHTA-NKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKITE 219 (344)
T ss_dssp EEEESCGGGEEES-SCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred eEEEccccccccC-CCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEEEec
Confidence 4588887654443 7899999855432221 1 235666778899999999987653
No 289
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=87.52 E-value=1.5 Score=35.04 Aligned_cols=43 Identities=14% Similarity=0.228 Sum_probs=33.4
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCC--Cccceeeeccc
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAE--NSVDLLISNLA 47 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~--~~FD~Vis~~~ 47 (245)
+|+|+.|++.++++ . ..+++++++|+..+++++ +.| .|++|.-
T Consensus 60 vEid~~~~~~~~~~-~-~~~v~~i~~D~~~~~~~~~~~~~-~vv~NlP 104 (249)
T 3ftd_A 60 IELDREMVENLKSI-G-DERLEVINEDASKFPFCSLGKEL-KVVGNLP 104 (249)
T ss_dssp ECCCHHHHHHHTTS-C-CTTEEEECSCTTTCCGGGSCSSE-EEEEECC
T ss_pred EECCHHHHHHHHhc-c-CCCeEEEEcchhhCChhHccCCc-EEEEECc
Confidence 79999999999988 4 368999999999998763 233 5666543
No 290
>2km1_A Protein DRE2; yeast, antiapoptotic, protein binding; NMR {Saccharomyces cerevisiae}
Probab=87.48 E-value=0.46 Score=34.36 Aligned_cols=41 Identities=5% Similarity=0.037 Sum_probs=29.5
Q ss_pred CCCCCccceeeecccc--cccCChhHHHHHHHhhhcCCcEEEE
Q psy16312 33 PFAENSVDLLISNLAL--HWVNNLPGCFQQVLKCLRQDGVFLA 73 (245)
Q Consensus 33 ~~~~~~FD~Vis~~~l--~~~~d~~~~l~~i~r~LkpGG~l~~ 73 (245)
.+++++||.|+-..-- ....=+..++..++..|||||.|..
T Consensus 54 sLp~stYD~V~~lt~~~~~~~~l~r~li~~l~~aLkpgG~L~g 96 (136)
T 2km1_A 54 TLENAKYETVHYLTPEAQTDIKFPKKLISVLADSLKPNGSLIG 96 (136)
T ss_dssp CCCSSSCCSEEEECCCSSCSCCCCHHHHHHHHTTCCTTCCEEC
T ss_pred cCCcccccEEEEecCCccchhhcCHHHHHHHHHHhCCCCEEEe
Confidence 3557899999853311 1122247899999999999999985
No 291
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=87.26 E-value=0.016 Score=47.10 Aligned_cols=50 Identities=10% Similarity=0.075 Sum_probs=35.8
Q ss_pred CcChH-------HHHHhhCCCCCC--C-CceeEEEcCCCCC-C-CCC--Cccceeeeccccccc
Q psy16312 2 CDNCE-------SILSQAEPPEDT--E-VIYEKKFVDEEHL-P-FAE--NSVDLLISNLALHWV 51 (245)
Q Consensus 2 iD~S~-------~ml~~A~~~~~~--~-~~i~f~~~D~~~l-~-~~~--~~FD~Vis~~~l~~~ 51 (245)
+|+|+ .|++.|+++... . .+++|+++|++++ + +++ ++||+|++.-++++.
T Consensus 111 vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~fD~V~~dP~~~~~ 174 (258)
T 2r6z_A 111 FEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGKPDIVYLDPMYPER 174 (258)
T ss_dssp EECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCCCSEEEECCCC---
T ss_pred EECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCCccEEEECCCCCCc
Confidence 78999 999999876431 1 2499999999874 3 433 689999998776653
No 292
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=86.98 E-value=0.053 Score=45.07 Aligned_cols=45 Identities=18% Similarity=0.043 Sum_probs=35.4
Q ss_pred CcChHHHHHhhCCCCCC-CCceeEEEcCCCCCC--CC---CCccceeeecc
Q psy16312 2 CDNCESILSQAEPPEDT-EVIYEKKFVDEEHLP--FA---ENSVDLLISNL 46 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~-~~~i~f~~~D~~~l~--~~---~~~FD~Vis~~ 46 (245)
+|.|+.|++.|++++.. ..+++|+++|+.+++ +. .++||.|++..
T Consensus 56 vD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~Vl~D~ 106 (301)
T 1m6y_A 56 IDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGILMDL 106 (301)
T ss_dssp EESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEEEEEC
T ss_pred EECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEEEEcC
Confidence 79999999999987653 257999999998875 21 15899999754
No 293
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=86.66 E-value=0.42 Score=40.18 Aligned_cols=98 Identities=14% Similarity=0.204 Sum_probs=60.8
Q ss_pred CceeEEEcCCCCCC--------C-CCCccceeeecccccccCC--hhHHHHHHHhhhcCCcEEE-EEecCC----CcHHH
Q psy16312 20 VIYEKKFVDEEHLP--------F-AENSVDLLISNLALHWVNN--LPGCFQQVLKCLRQDGVFL-ASIFGG----ETLYE 83 (245)
Q Consensus 20 ~~i~f~~~D~~~l~--------~-~~~~FD~Vis~~~l~~~~d--~~~~l~~i~r~LkpGG~l~-~~~~~~----~~~~~ 83 (245)
.+..++-+|+.+.. . ..+...++++-.+|+|++. ...+++.+.... |+|.++ +....+ +.+..
T Consensus 167 ~~~~~v~~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i~~~~~~~~fg~ 245 (334)
T 1rjd_A 167 GRYKLAACDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPIGGSQPNDRFGA 245 (334)
T ss_dssp SSEEEEECCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEECCCCSTTCCHHH
T ss_pred CceEEEecCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEeccCCCCCcchHHH
Confidence 46788889998742 1 2356789999999999953 336677777766 777664 554433 22332
Q ss_pred -HHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCe
Q psy16312 84 -LRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFN 122 (245)
Q Consensus 84 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~ 122 (245)
+...+. ...+........+++++...+.|.++||.
T Consensus 246 ~m~~~l~----~~rg~~l~~~~~y~s~~~~~~rl~~~Gf~ 281 (334)
T 1rjd_A 246 IMQSNLK----ESRNLEMPTLMTYNSKEKYASRWSAAPNV 281 (334)
T ss_dssp HHHHHHH----HHHCCCCTTTTTTCSHHHHHGGGTTSSEE
T ss_pred HHHHHhh----cccCCcccccccCCCHHHHHHHHHHCCCC
Confidence 111111 10122122333567889999999999996
No 294
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=86.62 E-value=0.15 Score=41.42 Aligned_cols=67 Identities=3% Similarity=-0.029 Sum_probs=41.1
Q ss_pred CcChHHH-------HHhhCCCCCC-C---CceeEEEcCCCC-CCCCCCccceeeecccccccCChhHHHHHHHhhhcCCc
Q psy16312 2 CDNCESI-------LSQAEPPEDT-E---VIYEKKFVDEEH-LPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDG 69 (245)
Q Consensus 2 iD~S~~m-------l~~A~~~~~~-~---~~i~f~~~D~~~-l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG 69 (245)
+|.++.+ ++.|+++... . .+++++++|+.+ ++...++||+|++.-.+++- ....++++..++|++.+
T Consensus 116 vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~fDvV~lDP~y~~~-~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 116 LERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPRPQVVYLDPMFPHK-QKSALVKKEMRVFQSLV 194 (258)
T ss_dssp EECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSCCSEEEECCCCCCC-CC-----HHHHHHHHHS
T ss_pred EECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCcccCCEEEEcCCCCCc-ccchHHHHHHHHHHHhh
Confidence 6888866 4444333221 1 469999999876 34223479999998777653 33456777888888765
No 295
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=85.61 E-value=0.17 Score=43.04 Aligned_cols=75 Identities=9% Similarity=-0.028 Sum_probs=46.1
Q ss_pred CcChHHHHHhhCCCC--------CCCCceeEEEcCCCCCC-CCCCccceeee----ccc----cc------ccCC-----
Q psy16312 2 CDNCESILSQAEPPE--------DTEVIYEKKFVDEEHLP-FAENSVDLLIS----NLA----LH------WVNN----- 53 (245)
Q Consensus 2 iD~S~~ml~~A~~~~--------~~~~~i~f~~~D~~~l~-~~~~~FD~Vis----~~~----l~------~~~d----- 53 (245)
+|+|+.-++..++++ ....++.+.+.|+..++ ...+.||.|++ +.. +. |-..
T Consensus 178 ~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~ 257 (359)
T 4fzv_A 178 NDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQ 257 (359)
T ss_dssp ECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHH
T ss_pred EcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCEEEECCccCCCCCcccccChhhhhhCCHHHHH
Confidence 466665554443321 11247888888987764 33578999983 321 11 1111
Q ss_pred -----hhHHHHHHHhhhcCCcEEEEEec
Q psy16312 54 -----LPGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 54 -----~~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
....|.+..+.|||||+++-++.
T Consensus 258 ~l~~lQ~~iL~~a~~~lkpGG~LVYsTC 285 (359)
T 4fzv_A 258 ILPVLQVQLLAAGLLATKPGGHVVYSTC 285 (359)
T ss_dssp THHHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred HHHHHHHHHHHHHHhcCCCCcEEEEEeC
Confidence 12567888999999999887764
No 296
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=84.72 E-value=3.2 Score=33.51 Aligned_cols=53 Identities=17% Similarity=0.099 Sum_probs=36.4
Q ss_pred eEEEc-CCCCCCCCCCccceeeecccccccC----Chh---HHHHHHHhhhcCCc-EEEEEecCC
Q psy16312 23 EKKFV-DEEHLPFAENSVDLLISNLALHWVN----NLP---GCFQQVLKCLRQDG-VFLASIFGG 78 (245)
Q Consensus 23 ~f~~~-D~~~l~~~~~~FD~Vis~~~l~~~~----d~~---~~l~~i~r~LkpGG-~l~~~~~~~ 78 (245)
.|..+ |+.+++ ...+|+|+|=++-. .. |.. .+|.-+.++|+||| .|++=+|.+
T Consensus 125 ~~~~G~Df~~~~--~~~~DvVLSDMAPn-SG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvKVFqg 186 (269)
T 2px2_A 125 TMKSGVDVFYKP--SEISDTLLCDIGES-SPSAEIEEQRTLRILEMVSDWLSRGPKEFCIKILCP 186 (269)
T ss_dssp EEECSCCGGGSC--CCCCSEEEECCCCC-CSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEEESCT
T ss_pred EeeccCCccCCC--CCCCCEEEeCCCCC-CCccHHHHHHHHHHHHHHHHHhhcCCcEEEEEECCC
Confidence 44446 887754 45799999966443 32 222 24666679999999 999888764
No 297
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=83.70 E-value=0.56 Score=39.15 Aligned_cols=54 Identities=15% Similarity=0.188 Sum_probs=36.7
Q ss_pred eeEE-EcCCCC-C-CCCCCccceeeec--cccc---------ccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 22 YEKK-FVDEEH-L-PFAENSVDLLISN--LALH---------WVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 22 i~f~-~~D~~~-l-~~~~~~FD~Vis~--~~l~---------~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
.... ++|+.. + .+++++||+|+.- +... |+.-....|.+++++|+|||.+++..
T Consensus 39 ~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~~ 106 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIFG 106 (319)
T ss_dssp EEEEEECCHHHHHHTSCTTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceEEECCcHHHHHHhCccCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 4566 888854 2 2456799999962 1111 22224577889999999999988875
No 298
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=83.45 E-value=0.47 Score=38.92 Aligned_cols=55 Identities=9% Similarity=-0.017 Sum_probs=41.0
Q ss_pred CceeEEEcCCCC-CC-CCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEec
Q psy16312 20 VIYEKKFVDEEH-LP-FAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 20 ~~i~f~~~D~~~-l~-~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
.+|+++.+|+.+ +| +++++||+|+.=.-. -......|..+...|+|||.+++...
T Consensus 189 ~~I~li~Gda~etL~~~~~~~~d~vfIDaD~--y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 189 EQVRFLPGWFKDTLPTAPIDTLAVLRMDGDL--YESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp TTEEEEESCHHHHSTTCCCCCEEEEEECCCS--HHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CceEEEEeCHHHHHhhCCCCCEEEEEEcCCc--cccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 579999999964 54 335789999865432 11234679999999999999998754
No 299
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=83.25 E-value=1.7 Score=41.00 Aligned_cols=75 Identities=12% Similarity=-0.069 Sum_probs=46.1
Q ss_pred CcChHHHHHhh--CCCC------CCCCceeEEEcCCCCCC-CCCCccceeeeccccc--ccC------------------
Q psy16312 2 CDNCESILSQA--EPPE------DTEVIYEKKFVDEEHLP-FAENSVDLLISNLALH--WVN------------------ 52 (245)
Q Consensus 2 iD~S~~ml~~A--~~~~------~~~~~i~f~~~D~~~l~-~~~~~FD~Vis~~~l~--~~~------------------ 52 (245)
+|+++.+++.| +... .+.....+...|..... ...+.||+|++|=-.. +-.
T Consensus 354 vEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~g~p~~ 433 (878)
T 3s1s_A 354 NDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQLTGNR 433 (878)
T ss_dssp ECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTEEEEEECCBCCSSCCCHHHHHHHHHHHHHHHSSC
T ss_pred EECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCCCEEEECCCccccccchhhhhhHHHHhhhhcccc
Confidence 58889888888 3211 11122344555555432 2347899999975431 110
Q ss_pred --------C-hhHHHHHHHhhhcCCcEEEEEec
Q psy16312 53 --------N-LPGCFQQVLKCLRQDGVFLASIF 76 (245)
Q Consensus 53 --------d-~~~~l~~i~r~LkpGG~l~~~~~ 76 (245)
+ ...++..+.+.|+|||++++.++
T Consensus 434 p~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP 466 (878)
T 3s1s_A 434 PQTLFGQIGVEALFLELVTELVQDGTVISAIMP 466 (878)
T ss_dssp CSSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred ccccccccchHHHHHHHHHHhcCCCcEEEEEEC
Confidence 1 22467889999999999988763
No 300
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=81.20 E-value=11 Score=31.95 Aligned_cols=51 Identities=4% Similarity=-0.073 Sum_probs=39.6
Q ss_pred CceeEEEcCCCCCCCCCCccceeeecccccccCChhHHHHHHHhhhcCC--cEEEEE
Q psy16312 20 VIYEKKFVDEEHLPFAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQD--GVFLAS 74 (245)
Q Consensus 20 ~~i~f~~~D~~~l~~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpG--G~l~~~ 74 (245)
++|++..+|+..+..+.+.||+|+|-++. ++..++.-+.++|..| +.++++
T Consensus 252 ~~V~~~~~d~~~~~~~~~~~D~vvsDm~~----~p~~~~~l~~~wl~~~~~~~aI~~ 304 (375)
T 4auk_A 252 GQVTWLREDGFKFRPTRSNISWMVCDMVE----KPAKVAALMAQWLVNGWCRETIFN 304 (375)
T ss_dssp TCEEEECSCTTTCCCCSSCEEEEEECCSS----CHHHHHHHHHHHHHTTSCSEEEEE
T ss_pred CCeEEEeCccccccCCCCCcCEEEEcCCC----ChHHhHHHHHHHHhccccceEEEE
Confidence 67999999999887777889999997764 5677777788877776 234444
No 301
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=80.03 E-value=0.32 Score=39.82 Aligned_cols=43 Identities=16% Similarity=0.118 Sum_probs=32.9
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCCCCCC------ccceeeecc
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLPFAEN------SVDLLISNL 46 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~~~~~------~FD~Vis~~ 46 (245)
+|+|+.|++.|+++. ..+++++++|+..+++++- ..+.|++|.
T Consensus 74 vDid~~~l~~a~~~~--~~~v~~i~~D~~~~~~~~~~~~~~~~~~~vv~Nl 122 (279)
T 3uzu_A 74 VELDRDLIGRLEQRF--GELLELHAGDALTFDFGSIARPGDEPSLRIIGNL 122 (279)
T ss_dssp EECCHHHHHHHHHHH--GGGEEEEESCGGGCCGGGGSCSSSSCCEEEEEEC
T ss_pred EECCHHHHHHHHHhc--CCCcEEEECChhcCChhHhcccccCCceEEEEcc
Confidence 799999999998874 3689999999999887521 223566664
No 302
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=76.13 E-value=1.3 Score=35.61 Aligned_cols=53 Identities=19% Similarity=0.182 Sum_probs=32.9
Q ss_pred eEEEcCCCC-CC-CCCCccceeeecc--ccc------------ccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 23 EKKFVDEEH-LP-FAENSVDLLISNL--ALH------------WVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 23 ~f~~~D~~~-l~-~~~~~FD~Vis~~--~l~------------~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
.++++|+.+ +. +++++||+|++-= ... |+.-....+.+++++|+|||.+++..
T Consensus 6 ~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~~ 74 (260)
T 1g60_A 6 KIHQMNCFDFLDQVENKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIFN 74 (260)
T ss_dssp SEEECCHHHHHHHSCTTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEechHHHHHHhccccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEEc
Confidence 456777643 21 3356888888521 111 11123467888999999999988774
No 303
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=68.03 E-value=1.8 Score=34.99 Aligned_cols=43 Identities=21% Similarity=0.290 Sum_probs=29.3
Q ss_pred CCccceeeeccc----cccc---CChh----HHHHHHHhhhcCCcEEEEEecCC
Q psy16312 36 ENSVDLLISNLA----LHWV---NNLP----GCFQQVLKCLRQDGVFLASIFGG 78 (245)
Q Consensus 36 ~~~FD~Vis~~~----l~~~---~d~~----~~l~~i~r~LkpGG~l~~~~~~~ 78 (245)
-+.||+|+.+.. .||. .|.. -+-....++|+|||.+++...|-
T Consensus 209 ~grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGy 262 (324)
T 3trk_A 209 LGRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGY 262 (324)
T ss_dssp GCCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCC
T ss_pred CCceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecc
Confidence 379999998763 2333 2322 23446678999999999887654
No 304
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=65.27 E-value=32 Score=27.47 Aligned_cols=58 Identities=16% Similarity=0.072 Sum_probs=42.0
Q ss_pred CCceeEEEc-CCCCCCCCCCccceeeecccccccCChh-------HHHHHHHhhhcCCcEEEEEecCCCc
Q psy16312 19 EVIYEKKFV-DEEHLPFAENSVDLLISNLALHWVNNLP-------GCFQQVLKCLRQDGVFLASIFGGET 80 (245)
Q Consensus 19 ~~~i~f~~~-D~~~l~~~~~~FD~Vis~~~l~~~~d~~-------~~l~~i~r~LkpGG~l~~~~~~~~~ 80 (245)
++.++|..+ |+..++. ..+|.|+|-.+= -.+++. ++|.-+.++|++ |.|++-++.+..
T Consensus 126 wn~v~fk~gvDv~~~~~--~~~DtllcDIge-Ss~~~~vE~~RtlrvLela~~wL~~-~~fc~KVl~py~ 191 (267)
T 3p8z_A 126 WNIVKLMSGKDVFYLPP--EKCDTLLCDIGE-SSPSPTVEESRTIRVLKMVEPWLKN-NQFCIKVLNPYM 191 (267)
T ss_dssp TTSEEEECSCCGGGCCC--CCCSEEEECCCC-CCSCHHHHHHHHHHHHHHHGGGCSS-CEEEEEESCCCS
T ss_pred cCceEEEeccceeecCC--ccccEEEEecCC-CCCChhhhhhHHHHHHHHHHHhccc-CCEEEEEccCCC
Confidence 467899998 9876654 569999997655 333433 356666788999 888888877765
No 305
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=63.61 E-value=2.2 Score=34.34 Aligned_cols=56 Identities=11% Similarity=0.067 Sum_probs=41.0
Q ss_pred CceeEEEcCCCC-CC-----CCCCccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 20 VIYEKKFVDEEH-LP-----FAENSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 20 ~~i~f~~~D~~~-l~-----~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
.+++++.+++.+ +| .+..+||+|+.=.-. -..-...+..+...|+|||.+++..++
T Consensus 158 ~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~--Y~~t~~~le~~~p~l~~GGvIv~DD~~ 219 (257)
T 3tos_A 158 QRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL--YEPTKAVLEAIRPYLTKGSIVAFDELD 219 (257)
T ss_dssp CSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC--HHHHHHHHHHHGGGEEEEEEEEESSTT
T ss_pred CcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc--cchHHHHHHHHHHHhCCCcEEEEcCCC
Confidence 679999999975 33 234579999865431 122345788999999999999998764
No 306
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=63.49 E-value=36 Score=28.03 Aligned_cols=57 Identities=16% Similarity=0.108 Sum_probs=41.7
Q ss_pred CceeEEEc-CCCCCCCCCCccceeeecccccccCChh-------HHHHHHHhhhcCC-cEEEEEecCCC
Q psy16312 20 VIYEKKFV-DEEHLPFAENSVDLLISNLALHWVNNLP-------GCFQQVLKCLRQD-GVFLASIFGGE 79 (245)
Q Consensus 20 ~~i~f~~~-D~~~l~~~~~~FD~Vis~~~l~~~~d~~-------~~l~~i~r~LkpG-G~l~~~~~~~~ 79 (245)
..|.|..+ |+..++. ..+|+|+|-.+ .-.+++. ++|.-+.++|++| |.|++-++.+-
T Consensus 143 ~lV~~~~~~Dv~~l~~--~~~D~ivcDig-eSs~~~~ve~~Rtl~vLel~~~wL~~~~~~f~~KVl~pY 208 (321)
T 3lkz_A 143 NIVTMKSGVDVFYRPS--ECCDTLLCDIG-ESSSSAEVEEHRTIRVLEMVEDWLHRGPREFCVKVLCPY 208 (321)
T ss_dssp GGEEEECSCCTTSSCC--CCCSEEEECCC-CCCSCHHHHHHHHHHHHHHHHHHHTTCCCEEEEEESCTT
T ss_pred cceEEEeccCHhhCCC--CCCCEEEEECc-cCCCChhhhhhHHHHHHHHHHHHhccCCCcEEEEEcCCC
Confidence 34778777 8877765 56999999766 5555543 3566667889999 89988888773
No 307
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=60.60 E-value=4.5 Score=33.04 Aligned_cols=25 Identities=20% Similarity=0.305 Sum_probs=20.9
Q ss_pred ChhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 53 NLPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 53 d~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
....+|..+..+|+|||++++.+|.
T Consensus 211 ~L~~~L~~a~~~L~~gGrl~visfH 235 (285)
T 1wg8_A 211 ALKEFLEQAAEVLAPGGRLVVIAFH 235 (285)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEECS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEecC
Confidence 3568899999999999999877643
No 308
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=58.74 E-value=3 Score=34.12 Aligned_cols=43 Identities=16% Similarity=0.100 Sum_probs=33.9
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCCCC-----CCCCccceeeecc
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEHLP-----FAENSVDLLISNL 46 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~l~-----~~~~~FD~Vis~~ 46 (245)
+|.++.+++.|++ +.. .++.++++++.+++ ...++||.|++..
T Consensus 50 iD~Dp~Ai~~A~~-L~~-~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~DL 97 (285)
T 1wg8_A 50 LDQDPEAVARAKG-LHL-PGLTVVQGNFRHLKRHLAALGVERVDGILADL 97 (285)
T ss_dssp EESCHHHHHHHHH-TCC-TTEEEEESCGGGHHHHHHHTTCSCEEEEEEEC
T ss_pred EeCCHHHHHHHHh-hcc-CCEEEEECCcchHHHHHHHcCCCCcCEEEeCC
Confidence 6999999999988 654 58999999998874 2235799999643
No 309
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=58.71 E-value=4.8 Score=33.81 Aligned_cols=25 Identities=16% Similarity=0.258 Sum_probs=21.1
Q ss_pred ChhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 53 NLPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 53 d~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
....+|..+..+|+|||++++.+|.
T Consensus 252 ~L~~~L~~a~~~L~~gGRl~VISFH 276 (347)
T 3tka_A 252 EIEQALKSSLNVLAPGGRLSIISFH 276 (347)
T ss_dssp HHHHHHHHHHHHEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHHhCCCCEEEEEecC
Confidence 4568899999999999999887754
No 310
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=58.63 E-value=78 Score=26.24 Aligned_cols=102 Identities=11% Similarity=0.086 Sum_probs=60.7
Q ss_pred CceeEEEcCCCCC----------CCCCCccceeeecccccccCC--hhHHHHHHHhhhcCCcEEEEEecCCCc-HHHHHH
Q psy16312 20 VIYEKKFVDEEHL----------PFAENSVDLLISNLALHWVNN--LPGCFQQVLKCLRQDGVFLASIFGGET-LYELRS 86 (245)
Q Consensus 20 ~~i~f~~~D~~~l----------~~~~~~FD~Vis~~~l~~~~d--~~~~l~~i~r~LkpGG~l~~~~~~~~~-~~~~~~ 86 (245)
.+.+++-+|+.++ .+..+.--++++-.+|++++. ...+|+.+.....+|..++....++.. +...
T Consensus 163 ~~y~~v~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~~~~i~yE~i~p~d~fg~~-- 240 (334)
T 3iei_A 163 KRYAVIGADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFERAMFINYEQVNMGDRFGQI-- 240 (334)
T ss_dssp SSEEEEECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSSEEEEEEEECCTTSHHHHH--
T ss_pred CceEEEccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCCceEEEEeccCCCCHHHHH--
Confidence 4677888998763 133345568999999999953 336677777766544445555444432 2221
Q ss_pred HHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeeeE
Q psy16312 87 AVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNMLT 125 (245)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~~ 125 (245)
+... ....+-.......+++++...+.|.++||..+.
T Consensus 241 -M~~~-l~~~g~pl~sl~~y~t~~~~~~r~~~~Gw~~~~ 277 (334)
T 3iei_A 241 -MIEN-LRRRQCDLAGVETCKSLESQKERLLSNGWETAS 277 (334)
T ss_dssp -HHHH-HHTTTCCCTTGGGGGCHHHHHHHHHTTTCSEEE
T ss_pred -HHHH-HHHhCCCCcccccCCCHHHHHHHHHHcCCCcce
Confidence 1111 112222122333457888889999999999754
No 311
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=54.53 E-value=17 Score=29.57 Aligned_cols=74 Identities=7% Similarity=-0.033 Sum_probs=46.8
Q ss_pred CcChHHHHHhhCCCCCCCCceeEEEcCCCC-CC---CCCCccceeeecccccccCChhHHHHHHHh--hhcCCcEEEEEe
Q psy16312 2 CDNCESILSQAEPPEDTEVIYEKKFVDEEH-LP---FAENSVDLLISNLALHWVNNLPGCFQQVLK--CLRQDGVFLASI 75 (245)
Q Consensus 2 iD~S~~ml~~A~~~~~~~~~i~f~~~D~~~-l~---~~~~~FD~Vis~~~l~~~~d~~~~l~~i~r--~LkpGG~l~~~~ 75 (245)
+|.++..++.-+++.....++.+...|+.. +. -+...||+|+.==-...-.+..+++..+.+ .+.|+|.+++-.
T Consensus 119 vE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~WY 198 (283)
T 2oo3_A 119 CELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCVWY 198 (283)
T ss_dssp ECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEEEE
T ss_pred EeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEEEE
Confidence 678888888888877654678888888643 21 223569999873222211234466666655 345889877664
No 312
>4gua_A Non-structural polyprotein; viral precursor polyprotein, protease, zinc-binding, hydrola; HET: MES; 2.85A {Sindbis virus}
Probab=51.32 E-value=7.8 Score=34.80 Aligned_cols=43 Identities=21% Similarity=0.419 Sum_probs=29.6
Q ss_pred CCccceeeeccc----ccccC---Chh----HHHHHHHhhhcCCcEEEEEecCC
Q psy16312 36 ENSVDLLISNLA----LHWVN---NLP----GCFQQVLKCLRQDGVFLASIFGG 78 (245)
Q Consensus 36 ~~~FD~Vis~~~----l~~~~---d~~----~~l~~i~r~LkpGG~l~~~~~~~ 78 (245)
.++||+|+.+.- .||.. |.. -+-....++|+|||.+++..+|.
T Consensus 219 ~~ryDlvfvn~~t~yr~HHyqQCeDHa~~l~ml~~~al~~l~pGGt~v~~~YGy 272 (670)
T 4gua_A 219 QARYDLVFINIGTKYRNHHFQQCEDHAATLKTLSRSALNCLNPGGTLVVKSYGY 272 (670)
T ss_dssp CCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCC
T ss_pred CCcccEEEEecCCCcccchHHHHHHHHHHHHHHhHHHHhhcCCCceEEEEEeec
Confidence 479999998753 33332 222 23346778999999999887664
No 313
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=46.50 E-value=8.4 Score=31.64 Aligned_cols=25 Identities=20% Similarity=0.276 Sum_probs=20.6
Q ss_pred ChhHHHHHHHhhhcCCcEEEEEecC
Q psy16312 53 NLPGCFQQVLKCLRQDGVFLASIFG 77 (245)
Q Consensus 53 d~~~~l~~i~r~LkpGG~l~~~~~~ 77 (245)
....+|..+..+|+|||++.+.+|.
T Consensus 223 ~l~~~l~~~~~~l~~ggr~~visfh 247 (301)
T 1m6y_A 223 NLKEFLKKAEDLLNPGGRIVVISFH 247 (301)
T ss_dssp HHHHHHHHGGGGEEEEEEEEEEESS
T ss_pred HHHHHHHHHHHhhCCCCEEEEEecC
Confidence 3568899999999999999877643
No 314
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=42.63 E-value=14 Score=27.59 Aligned_cols=31 Identities=26% Similarity=0.426 Sum_probs=24.2
Q ss_pred CccceeeecccccccCChhHHHHHHHhhhcCCcEEEEE
Q psy16312 37 NSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLAS 74 (245)
Q Consensus 37 ~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~ 74 (245)
+.+|+|+.+.. ...+..+.++|+|||++++.
T Consensus 106 ~~~D~vi~~~g-------~~~~~~~~~~l~~~G~~v~~ 136 (198)
T 1pqw_A 106 YGVDVVLNSLA-------GEAIQRGVQILAPGGRFIEL 136 (198)
T ss_dssp CCEEEEEECCC-------THHHHHHHHTEEEEEEEEEC
T ss_pred CCCeEEEECCc-------hHHHHHHHHHhccCCEEEEE
Confidence 46999987643 25688899999999988765
No 315
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=41.89 E-value=1.4e+02 Score=27.17 Aligned_cols=98 Identities=12% Similarity=0.233 Sum_probs=57.9
Q ss_pred ceeEEEcCCCCCC----------C-CCCccceeeecccccccCC--hhHHHHHHHhhhcCCcEEEE-EecCC----CcHH
Q psy16312 21 IYEKKFVDEEHLP----------F-AENSVDLLISNLALHWVNN--LPGCFQQVLKCLRQDGVFLA-SIFGG----ETLY 82 (245)
Q Consensus 21 ~i~f~~~D~~~l~----------~-~~~~FD~Vis~~~l~~~~d--~~~~l~~i~r~LkpGG~l~~-~~~~~----~~~~ 82 (245)
+..++-+|+.++. + ..+.--++++-.+|++++. ..++|+.+.+ + |+|.+++ ....+ +.+.
T Consensus 189 ~y~~v~~Dl~~~~~~~~~l~~~g~~d~~~ptl~i~Egvl~Yl~~~~~~~ll~~~~~-~-~~~~~~~~e~~~~~~~~d~f~ 266 (695)
T 2zwa_A 189 KYLARPCDLNDSKMFSTLLNECQLYDPNVVKVFVAEVSLAYMKPERSDSIIEATSK-M-ENSHFIILEQLIPKGPFEPFS 266 (695)
T ss_dssp SEEEEECCTTCHHHHHHHHHHTTTTCTTEEEEEEEESSGGGSCHHHHHHHHHHHHT-S-SSEEEEEEEECCTTCTTSHHH
T ss_pred CeeEEeCcCCCcHHHHHHHhhccCCCCCCCEEEeeeeEEEEcCHHHHHHHHHHHhh-C-CCceEEEEEeecCCCCCChHH
Confidence 6778889998741 2 3344557889999999953 3366777764 4 6665544 44333 2232
Q ss_pred HHHHHHHHHHHHhcCCCCCcccCCCCHHHHHHHHHhCCCeee
Q psy16312 83 ELRSAVHLAEMERRGGVASHISPFTQIRDVGSLLTRAGFNML 124 (245)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aGF~~~ 124 (245)
... ... ....+-.......+++.++..+.|.++||+.+
T Consensus 267 ~~m--~~~--~~~~g~~l~~~~~~~~~~~~~~~~~~~Gw~~v 304 (695)
T 2zwa_A 267 KQM--LAH--FKRNDSPLQSVLKYNTIESQVQRFNKLGFAYV 304 (695)
T ss_dssp HHH--HHH--HHHTTCCCCGGGTCCSHHHHHHHHHHTTCCEE
T ss_pred HHH--HHH--HHHcCCCCCccccCCCHHHHHHHHHHCCCCCc
Confidence 211 111 11122112233446788999999999999864
No 316
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=41.16 E-value=27 Score=31.06 Aligned_cols=73 Identities=10% Similarity=0.053 Sum_probs=42.3
Q ss_pred cChHHHHHhhCCCC--CCCCceeEEEcCCCCCCCC----CCccceeeeccccc--cc-----------C--Ch-hHHHHH
Q psy16312 3 DNCESILSQAEPPE--DTEVIYEKKFVDEEHLPFA----ENSVDLLISNLALH--WV-----------N--NL-PGCFQQ 60 (245)
Q Consensus 3 D~S~~ml~~A~~~~--~~~~~i~f~~~D~~~l~~~----~~~FD~Vis~~~l~--~~-----------~--d~-~~~l~~ 60 (245)
|+.+.+...|+-+. .+.....+.++|....|.. ...||+|++|=-+. |- + +. ...+..
T Consensus 261 E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~ 340 (530)
T 3ufb_A 261 EAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQL 340 (530)
T ss_dssp CCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHH
T ss_pred hccHHHHHHHHHHHHhcCCccccccccccccCchhhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHH
Confidence 56666666665321 1111234566776655432 34799999975442 11 0 11 145778
Q ss_pred HHhhhc-------CCcEEEEEe
Q psy16312 61 VLKCLR-------QDGVFLASI 75 (245)
Q Consensus 61 i~r~Lk-------pGG~l~~~~ 75 (245)
+.+.|| |||++++.+
T Consensus 341 ~l~~Lk~~~~~l~~gGr~avVl 362 (530)
T 3ufb_A 341 IMRKLKRPGHGSDNGGRAAVVV 362 (530)
T ss_dssp HHHHBCCTTSSSSSCCEEEEEE
T ss_pred HHHHhhhhhhccCCCceEEEEe
Confidence 888887 799988776
No 317
>2g7j_A Putative cytoplasmic protein; STR72, autostructure, structural genomics, PSI, protein STRU initiative; NMR {Salmonella typhimurium} SCOP: d.198.5.1
Probab=30.59 E-value=63 Score=22.03 Aligned_cols=21 Identities=24% Similarity=0.452 Sum_probs=17.5
Q ss_pred CHHHHHHHHHhCCCeeeEEEE
Q psy16312 108 QIRDVGSLLTRAGFNMLTIDV 128 (245)
Q Consensus 108 ~~~~~~~~l~~aGF~~~~~~~ 128 (245)
.++++.+.|+++||+...+..
T Consensus 4 RPDEVArVLEk~GF~~D~vt~ 24 (124)
T 2g7j_A 4 RPDEVARVLEKAGFTVDVVTN 24 (124)
T ss_dssp CHHHHHHHHHHTTCEEEEEET
T ss_pred ChHHHHHHHHHcCceEEEeec
Confidence 578999999999999876653
No 318
>3g2e_A OORC subunit of 2-oxoglutarate:acceptor oxidoredu; structural genomics, PSI-2, protein structure initiative; 2.00A {Campylobacter jejuni}
Probab=28.22 E-value=1.1e+02 Score=23.05 Aligned_cols=31 Identities=16% Similarity=0.406 Sum_probs=23.3
Q ss_pred CccceeeecccccccCChhHHHHHHHhhhcCCcEEEEEe
Q psy16312 37 NSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLASI 75 (245)
Q Consensus 37 ~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~~ 75 (245)
+..|++++. |+.. +.+....|+|||.+++.+
T Consensus 69 g~~D~lv~~-------d~~~-~~~~~~~l~~gg~vi~ns 99 (194)
T 3g2e_A 69 GEVDFMLST-------ADKG-YKGFRGGVKEGGIIVVEP 99 (194)
T ss_dssp TCEEEEEEC-------CHHH-HHHHGGGEEEEEEEEECT
T ss_pred CCCCEEEEc-------CHHH-HHHHHhccCCCeEEEEeC
Confidence 479999985 3443 345678899999998875
No 319
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=27.24 E-value=62 Score=29.53 Aligned_cols=52 Identities=23% Similarity=0.287 Sum_probs=32.6
Q ss_pred ceeEEEcCCCC-CC-CC---CCccceeeec-ccccccCC--hhHHHHHHHhhhcCCcEEE
Q psy16312 21 IYEKKFVDEEH-LP-FA---ENSVDLLISN-LALHWVNN--LPGCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 21 ~i~f~~~D~~~-l~-~~---~~~FD~Vis~-~~l~~~~d--~~~~l~~i~r~LkpGG~l~ 72 (245)
.++...+|+.+ ++ +. ++.||+++.- ++-.--++ ...++..++++++|||.+.
T Consensus 149 ~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~ 208 (689)
T 3pvc_A 149 TLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFS 208 (689)
T ss_dssp EEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEE
T ss_pred EEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEE
Confidence 46677788854 33 21 4689999862 11111111 1578999999999999865
No 320
>1whz_A Hypothetical protein; alpha and beta protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.52A {Thermus thermophilus} SCOP: d.50.3.2
Probab=26.22 E-value=96 Score=18.83 Aligned_cols=28 Identities=18% Similarity=0.128 Sum_probs=19.5
Q ss_pred CHHHHHHHHHhCCCeeeEEEEEeEEEeC
Q psy16312 108 QIRDVGSLLTRAGFNMLTIDVDEIVIHY 135 (245)
Q Consensus 108 ~~~~~~~~l~~aGF~~~~~~~~~~~~~~ 135 (245)
+..++.++|++.||..+...-....+..
T Consensus 6 ~~~elik~L~~~G~~~~r~~GSH~~~~~ 33 (70)
T 1whz_A 6 RPEEVARKLRRLGFVERMAKGGHRLYTH 33 (70)
T ss_dssp CHHHHHHHHHHTTCEEEEEETTEEEEEC
T ss_pred CHHHHHHHHHHCCCEEeCCCCCCceEec
Confidence 5678999999999997654433444443
No 321
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=25.67 E-value=45 Score=28.01 Aligned_cols=38 Identities=11% Similarity=0.146 Sum_probs=27.7
Q ss_pred Cccceeeeccccc---------ccCChhHHHHHHHhhhcCCcEEEEE
Q psy16312 37 NSVDLLISNLALH---------WVNNLPGCFQQVLKCLRQDGVFLAS 74 (245)
Q Consensus 37 ~~FD~Vis~~~l~---------~~~d~~~~l~~i~r~LkpGG~l~~~ 74 (245)
..+|+|+-...-. +.+++...+....++|++||++++.
T Consensus 253 ~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~ 299 (398)
T 1kol_A 253 PEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIP 299 (398)
T ss_dssp SCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEEC
T ss_pred CCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEe
Confidence 3699998654421 2335667899999999999998764
No 322
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=25.57 E-value=37 Score=27.68 Aligned_cols=31 Identities=16% Similarity=0.217 Sum_probs=24.4
Q ss_pred CccceeeecccccccCChhHHHHHHHhhhcCCcEEEEE
Q psy16312 37 NSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLAS 74 (245)
Q Consensus 37 ~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~ 74 (245)
+.+|+|+.+..- ..+....+.|+|||++++.
T Consensus 213 ~~~d~vi~~~g~-------~~~~~~~~~l~~~G~~v~~ 243 (333)
T 1v3u_A 213 DGYDCYFDNVGG-------EFLNTVLSQMKDFGKIAIC 243 (333)
T ss_dssp TCEEEEEESSCH-------HHHHHHHTTEEEEEEEEEC
T ss_pred CCCeEEEECCCh-------HHHHHHHHHHhcCCEEEEE
Confidence 579999877652 3578888999999998764
No 323
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=20.93 E-value=90 Score=25.63 Aligned_cols=32 Identities=13% Similarity=0.143 Sum_probs=23.8
Q ss_pred CccceeeecccccccCChhHHHHHHHhhhcCCcEEEEE
Q psy16312 37 NSVDLLISNLALHWVNNLPGCFQQVLKCLRQDGVFLAS 74 (245)
Q Consensus 37 ~~FD~Vis~~~l~~~~d~~~~l~~i~r~LkpGG~l~~~ 74 (245)
+.||+|+-... -...+....++|+|||+++..
T Consensus 241 ~g~D~vid~~g------~~~~~~~~~~~l~~~G~iv~~ 272 (356)
T 1pl8_A 241 CKPEVTIECTG------AEASIQAGIYATRSGGTLVLV 272 (356)
T ss_dssp SCCSEEEECSC------CHHHHHHHHHHSCTTCEEEEC
T ss_pred CCCCEEEECCC------ChHHHHHHHHHhcCCCEEEEE
Confidence 46899886543 134678889999999998765
No 324
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=20.42 E-value=1e+02 Score=27.94 Aligned_cols=51 Identities=16% Similarity=0.205 Sum_probs=31.8
Q ss_pred ceeEEEcCCCC-CC-CC---CCccceeeecccccccCCh----hHHHHHHHhhhcCCcEEE
Q psy16312 21 IYEKKFVDEEH-LP-FA---ENSVDLLISNLALHWVNNL----PGCFQQVLKCLRQDGVFL 72 (245)
Q Consensus 21 ~i~f~~~D~~~-l~-~~---~~~FD~Vis~~~l~~~~d~----~~~l~~i~r~LkpGG~l~ 72 (245)
.++...+|+.+ ++ +. ...||+|+.- .|---.+| ..++..++++++|||.+.
T Consensus 157 ~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D-~f~p~~np~~w~~~~~~~l~~~~~~g~~~~ 216 (676)
T 3ps9_A 157 TLDLWFGDINELTSQLDDSLNQKVDAWFLD-GFAPAKNPDMWTQNLFNAMARLARPGGTLA 216 (676)
T ss_dssp EEEEEESCHHHHGGGBCGGGTTCEEEEEEC-CSCGGGCGGGSCHHHHHHHHHHEEEEEEEE
T ss_pred EEEEecCCHHHHHHhcccccCCcccEEEEC-CCCCcCChhhhhHHHHHHHHHHhCCCCEEE
Confidence 34566677754 22 11 3679999851 11111222 378999999999999866
Done!