BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16313
(1018 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A1A5B6|TBC25_MOUSE TBC1 domain family member 25 OS=Mus musculus GN=Tbc1d25 PE=1 SV=1
Length = 742
Score = 369 bits (948), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/417 (46%), Positives = 265/417 (63%), Gaps = 25/417 (5%)
Query: 159 ECRKFSVDPQITSYEVLYSLLAKAFDV--RKEFSICYRVLDDCNQETFLPLLSDYELDAA 216
E R F+VDPQITS +VL +L +AFD+ +K F I Y D QETFL LLSD++L A
Sbjct: 104 EFRSFAVDPQITSLDVLQHILIRAFDLNGKKNFGISYLARDRLGQETFLSLLSDWDLSTA 163
Query: 217 IQNASDPCLCLRIDFVDTLSSGLDQDVAECVQPESSLSLMSFTQTKVPLKLQGLIKNQVS 276
AS P L LR+D + S L +D + + P+ + + + K L +
Sbjct: 164 FATASKPYLQLRVDIRPSEDSPLLEDW-DIISPKDVIG----SDVLLAEKRSSLTTAALP 218
Query: 277 IPCSFIQMLLKTDTQVEKTFNIFKGALSYMEDNMAALYLPPRSPLNDTEFRQFLDPVGQI 336
S + + +T ++V++ + SY ED P + PL+D EF +L+ GQ+
Sbjct: 219 FTQSILSQVGRTLSKVQQVLS-----WSYGEDVK-----PFKPPLSDAEFHTYLNHEGQL 268
Query: 337 IQSRELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKERMEYTRRKSEEYYKLRDTWKD 396
+ ELR IY+GG+EPSLR+VVW+++LNVYP+G++G+ERM+Y +RKS EY +L+ W
Sbjct: 269 SRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGRERMDYMKRKSREYEQLKSEW-- 326
Query: 397 LLKRGQMVG--DLAYVTGMVRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPAV 454
Q V DL ++ V KDVLRTDR H +YAG +D ++ +L ++LTTYA+ HP V
Sbjct: 327 ----AQRVNPEDLEFIRSTVLKDVLRTDRAHPYYAGPEDGPHLRALHDLLTTYAVTHPQV 382
Query: 455 SYCQGMSDLASPLLVTMSNEAHAYICFCALMRRLGRNFLVDGITMTQRFQHLADGLEYYH 514
SYCQGMSDLASP+L M +E HA++CFC +M+RL NF DG M +F HL L +
Sbjct: 383 SYCQGMSDLASPILAVMDHEGHAFVCFCGIMKRLAANFHPDGRAMATKFAHLKLLLRHAD 442
Query: 515 PKFYEYLKSHQADDLLYCYRWLLLEMKREFAFNDALIMLEVMWSSLPPNPPQGELPL 571
P FY+YL+ ADDL +CYRWLLLE+KREFAF+DAL MLEV WSSLPP+PP+ E+ L
Sbjct: 443 PDFYQYLQEAGADDLFFCYRWLLLELKREFAFDDALRMLEVTWSSLPPDPPEHEVEL 499
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 51/65 (78%)
Query: 942 NEFGGGNPFLMFLCISVLCQHSEHIMNHHMDYNEMAIYFDKMVRKHNVHKVLNEARKRYE 1001
EFG GNPF++FLC+++L +H +HIM + +DYNE+A++FD++VRKH++ +VL A+ +
Sbjct: 663 QEFGRGNPFMLFLCLAILLEHRDHIMRNGLDYNELAMHFDRLVRKHHLGRVLRRAKALFA 722
Query: 1002 SYLSA 1006
YL +
Sbjct: 723 DYLQS 727
Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 44/51 (86%)
Query: 3 LEKEKADDLLYCYRWLLLEMKREFAFNDALIMLEVMWSSLPPNPPQGELPL 53
L++ ADDL +CYRWLLLE+KREFAF+DAL MLEV WSSLPP+PP+ E+ L
Sbjct: 449 LQEAGADDLFFCYRWLLLELKREFAFDDALRMLEVTWSSLPPDPPEHEVEL 499
>sp|Q3MII6|TBC25_HUMAN TBC1 domain family member 25 OS=Homo sapiens GN=TBC1D25 PE=1 SV=2
Length = 688
Score = 366 bits (940), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/417 (47%), Positives = 267/417 (64%), Gaps = 25/417 (5%)
Query: 159 ECRKFSVDPQITSYEVLYSLLAKAFDV--RKEFSICYRVLDDCNQETFLPLLSDYELDAA 216
E R F+VDPQITS +VL +L +AFD+ +K F I Y D QE +L LLSD++L A
Sbjct: 50 EFRSFAVDPQITSLDVLQHILIRAFDLSGKKNFGISYLGRDRLGQEVYLSLLSDWDLSTA 109
Query: 217 IQNASDPCLCLRIDFVDTLSSGLDQDVAECVQPESSLSLMSFTQTKVPLKLQGLIKNQVS 276
AS P L LR+D + S L +D + + P+ + + V L + +
Sbjct: 110 FATASKPYLQLRVDIRPSEDSPLLEDW-DIISPKDVIG------SDVLLAEKRSSLTTAA 162
Query: 277 IPCSFIQMLLKTDTQVEKTFNIFKGALS--YMEDNMAALYLPPRSPLNDTEFRQFLDPVG 334
+P F Q +L TQV +T + + LS Y ED P + PL+D EF +L+ G
Sbjct: 163 LP--FTQSIL---TQVGRTLSKVQQVLSWSYGEDVK-----PFKPPLSDAEFHTYLNHEG 212
Query: 335 QIIQSRELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKERMEYTRRKSEEYYKLRDTW 394
Q+ + ELR IY+GG+EPSLR+VVW+++LNVYP+G++G+ERM+Y +RKS EY +L+ W
Sbjct: 213 QLSRPEELRLRIYHGGVEPSLRKVVWRYLLNVYPDGLTGRERMDYMKRKSREYEQLKSEW 272
Query: 395 KDLLKRGQMVGDLAYVTGMVRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPAV 454
+R DL ++ V KDVLRTDR H +YAG +D ++ +L ++LTTYA+ HP V
Sbjct: 273 A---QRAN-PEDLEFIRSTVLKDVLRTDRAHPYYAGPEDGPHLRALHDLLTTYAVTHPQV 328
Query: 455 SYCQGMSDLASPLLVTMSNEAHAYICFCALMRRLGRNFLVDGITMTQRFQHLADGLEYYH 514
SYCQGMSDLASP+L M +E HA++CFC +M+RL NF DG M +F HL L +
Sbjct: 329 SYCQGMSDLASPILAVMDHEGHAFVCFCGIMKRLAANFHPDGRAMATKFAHLKLLLRHAD 388
Query: 515 PKFYEYLKSHQADDLLYCYRWLLLEMKREFAFNDALIMLEVMWSSLPPNPPQGELPL 571
P FY+YL+ ADDL +CYRWLLLE+KREFAF+DAL MLEV WSSLPP+PP+ E+ L
Sbjct: 389 PDFYQYLQEAGADDLFFCYRWLLLELKREFAFDDALRMLEVTWSSLPPDPPEHEVEL 445
Score = 87.0 bits (214), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 51/65 (78%)
Query: 942 NEFGGGNPFLMFLCISVLCQHSEHIMNHHMDYNEMAIYFDKMVRKHNVHKVLNEARKRYE 1001
EFG GNPF++FLC+++L +H +HIM + +DYNE+A++FD++VRKH++ +VL AR +
Sbjct: 609 QEFGRGNPFMLFLCLAILLEHRDHIMRNGLDYNELAMHFDRLVRKHHLGRVLRRARALFA 668
Query: 1002 SYLSA 1006
YL +
Sbjct: 669 DYLQS 673
Score = 84.3 bits (207), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/51 (70%), Positives = 44/51 (86%)
Query: 3 LEKEKADDLLYCYRWLLLEMKREFAFNDALIMLEVMWSSLPPNPPQGELPL 53
L++ ADDL +CYRWLLLE+KREFAF+DAL MLEV WSSLPP+PP+ E+ L
Sbjct: 395 LQEAGADDLFFCYRWLLLELKREFAFDDALRMLEVTWSSLPPDPPEHEVEL 445
>sp|Q9CXF4|TBC15_MOUSE TBC1 domain family member 15 OS=Mus musculus GN=Tbc1d15 PE=1 SV=1
Length = 671
Score = 172 bits (435), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/248 (36%), Positives = 140/248 (56%), Gaps = 8/248 (3%)
Query: 318 RSPLNDTEFRQFLDPVGQIIQSRELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKERM 377
R P++ E+ + LDP G+++ ++ I+ GG+ SLR+ WK +L +P + +ER
Sbjct: 297 REPVSLEEWNKSLDPEGRLVAVESMKQKIFRGGLSHSLRKQAWKFLLGYFPWDSTKEERT 356
Query: 378 EYTRRKSEEYYKLRDTWKDLL----KRGQMVGDLAYVTGMVRKDVLRTDRHHVFYAGADD 433
+ ++K++EY++++ WK + KR + D ++ KDV RTDR + FY G D
Sbjct: 357 QLQKQKTDEYFRMKLQWKSVSEAQEKRNSRLRD---YRSLIEKDVNRTDRTNKFYEG-QD 412
Query: 434 NCNVISLFNILTTYALNHPAVSYCQGMSDLASPLLVTMSNEAHAYICFCALMRRLGRNFL 493
N +I L +IL TY + + Y QGMSDL SPLL M NE A+ CF + M ++ +NF
Sbjct: 413 NPGLILLHDILMTYCMYDFDLGYVQGMSDLLSPLLYVMENEVDAFWCFASYMDQMHQNFE 472
Query: 494 VDGITMTQRFQHLADGLEYYHPKFYEYLKSHQADDLLYCYRWLLLEMKREFAFNDALIML 553
M + L+ L F YL+S + L +C+RWLL+ KREF+F D L +
Sbjct: 473 EQMQGMKTQLIQLSTLLRLLDSGFCSYLESQDSGYLYFCFRWLLIRFKREFSFLDILRLW 532
Query: 554 EVMWSSLP 561
EVMW+ LP
Sbjct: 533 EVMWTELP 540
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 3 LEKEKADDLLYCYRWLLLEMKREFAFNDALIMLEVMWSSLP 43
LE + + L +C+RWLL+ KREF+F D L + EVMW+ LP
Sbjct: 500 LESQDSGYLYFCFRWLLIRFKREFSFLDILRLWEVMWTELP 540
>sp|Q8TC07|TBC15_HUMAN TBC1 domain family member 15 OS=Homo sapiens GN=TBC1D15 PE=1 SV=2
Length = 691
Score = 167 bits (422), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/248 (35%), Positives = 140/248 (56%), Gaps = 8/248 (3%)
Query: 318 RSPLNDTEFRQFLDPVGQIIQSRELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKERM 377
R P++ E+ + +D G+I+ ++ +I+ GG+ +LR+ WK +L +P + +ER
Sbjct: 314 REPVSLEEWTKNIDSEGRILNVDNMKQMIFRGGLSHALRKQAWKFLLGYFPWDSTKEERT 373
Query: 378 EYTRRKSEEYYKLRDTWKDLL----KRGQMVGDLAYVTGMVRKDVLRTDRHHVFYAGADD 433
+ ++K++EY++++ WK + KR + D ++ KDV RTDR + FY G D
Sbjct: 374 QLQKQKTDEYFRMKLQWKSISQEQEKRNSRLRD---YRSLIEKDVNRTDRTNKFYEGQD- 429
Query: 434 NCNVISLFNILTTYALNHPAVSYCQGMSDLASPLLVTMSNEAHAYICFCALMRRLGRNFL 493
N +I L +IL TY + + Y QGMSDL SPLL M NE A+ CF + M ++ +NF
Sbjct: 430 NPGLILLHDILMTYCMYDFDLGYVQGMSDLLSPLLYVMENEVDAFWCFASYMDQMHQNFE 489
Query: 494 VDGITMTQRFQHLADGLEYYHPKFYEYLKSHQADDLLYCYRWLLLEMKREFAFNDALIML 553
M + L+ L F YL+S + L +C+RWLL+ KREF+F D L +
Sbjct: 490 EQMQGMKTQLIQLSTLLRLLDSGFCSYLESQDSGYLYFCFRWLLIRFKREFSFLDILRLW 549
Query: 554 EVMWSSLP 561
EVMW+ LP
Sbjct: 550 EVMWTELP 557
Score = 52.4 bits (124), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%)
Query: 3 LEKEKADDLLYCYRWLLLEMKREFAFNDALIMLEVMWSSLP 43
LE + + L +C+RWLL+ KREF+F D L + EVMW+ LP
Sbjct: 517 LESQDSGYLYFCFRWLLIRFKREFSFLDILRLWEVMWTELP 557
>sp|Q8BYH7|TBC17_MOUSE TBC1 domain family member 17 OS=Mus musculus GN=Tbc1d17 PE=2 SV=2
Length = 645
Score = 159 bits (402), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/246 (34%), Positives = 134/246 (54%), Gaps = 3/246 (1%)
Query: 320 PLNDTEFRQFLDPVGQIIQSRELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKERMEY 379
P+ + E+ +++ P G++ EL+ I+ GG+ P LRR WK +L S +E +
Sbjct: 280 PVTEEEWNRYVGPEGRLQNVPELKNRIFSGGLSPGLRREAWKFLLGYLSWESSAEEHKAH 339
Query: 380 TRRKSEEYYKLRDTWKDLLKRGQMVGDLAY-VTGMVRKDVLRTDRHHVFYAGADDNCNVI 438
R+K++EY++++ WK + + L + ++ +DV RTDR + FY G + N +
Sbjct: 340 VRKKTDEYFRMKLQWKSVSAEQERRNSLLHGYRSLIERDVSRTDRTNKFYEGPE-NPGLS 398
Query: 439 SLFNILTTYALNHPAVSYCQGMSDLASPLLVTMSNEAHAYICFCALMRRLGRNFLVDGIT 498
L +IL TY + H + Y QGMSDL SP+L + NE A+ CFC M + NF T
Sbjct: 399 LLHDILLTYCMYHFDLGYVQGMSDLLSPILFVVQNEVDAFWCFCGFMELVHGNFEESQET 458
Query: 499 MTQRFQHLADGLEYYHPKFYEYLKSHQADDLLYCYRWLLLEMKREFAFNDALIMLEVMWS 558
M ++ L L ++L S + L +C+RWLL+ KREF F D L + EV+W+
Sbjct: 459 MKRQLGQLLLLLRVLDQPLCDFLDSQDSGSLCFCFRWLLIWFKREFPFPDVLRLWEVLWT 518
Query: 559 SLP-PN 563
LP PN
Sbjct: 519 GLPGPN 524
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 3 LEKEKADDLLYCYRWLLLEMKREFAFNDALIMLEVMWSSLP-PN 45
L+ + + L +C+RWLL+ KREF F D L + EV+W+ LP PN
Sbjct: 481 LDSQDSGSLCFCFRWLLIWFKREFPFPDVLRLWEVLWTGLPGPN 524
>sp|Q9HA65|TBC17_HUMAN TBC1 domain family member 17 OS=Homo sapiens GN=TBC1D17 PE=1 SV=2
Length = 648
Score = 158 bits (400), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 136/246 (55%), Gaps = 3/246 (1%)
Query: 320 PLNDTEFRQFLDPVGQIIQSRELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKERMEY 379
P+ + E+ + + P G++ Q EL+ I+ GG+ PSLRR WK +L + +E +
Sbjct: 280 PVTEEEWARHVGPEGRLQQVPELKNRIFSGGLSPSLRREAWKFLLGYLSWEGTAEEHKAH 339
Query: 380 TRRKSEEYYKLRDTWKDLLKRGQMVGDLAY-VTGMVRKDVLRTDRHHVFYAGADDNCNVI 438
R+K++EY++++ WK + + L + ++ +DV RTDR + FY G + N +
Sbjct: 340 IRKKTDEYFRMKLQWKSVSPEQERRNSLLHGYRSLIERDVSRTDRTNKFYEGPE-NPGLG 398
Query: 439 SLFNILTTYALNHPAVSYCQGMSDLASPLLVTMSNEAHAYICFCALMRRLGRNFLVDGIT 498
L +IL TY + H + Y QGMSDL SP+L + NE A+ CFC M + NF T
Sbjct: 399 LLNDILLTYCMYHFDLGYVQGMSDLLSPILYVIQNEVDAFWCFCGFMELVQGNFEESQET 458
Query: 499 MTQRFQHLADGLEYYHPKFYEYLKSHQADDLLYCYRWLLLEMKREFAFNDALIMLEVMWS 558
M ++ L L P ++L S + L +C+RWLL+ KREF F D L + EV+W+
Sbjct: 459 MKRQLGRLLLLLRVLDPLLCDFLDSQDSGSLCFCFRWLLIWFKREFPFPDVLRLWEVLWT 518
Query: 559 SLP-PN 563
LP PN
Sbjct: 519 GLPGPN 524
Score = 51.2 bits (121), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 3 LEKEKADDLLYCYRWLLLEMKREFAFNDALIMLEVMWSSLP-PN 45
L+ + + L +C+RWLL+ KREF F D L + EV+W+ LP PN
Sbjct: 481 LDSQDSGSLCFCFRWLLIWFKREFPFPDVLRLWEVLWTGLPGPN 524
>sp|Q8TBP0|TBC16_HUMAN TBC1 domain family member 16 OS=Homo sapiens GN=TBC1D16 PE=2 SV=1
Length = 767
Score = 130 bits (327), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 133/245 (54%), Gaps = 14/245 (5%)
Query: 321 LNDTEFRQFLDPVGQIIQSRELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKERMEYT 380
L + + L+ +GQ+ + +LR I++GGI+ S+R VW +L Y + +ER
Sbjct: 396 LGVSAWLNHLNELGQVEEEYKLRKAIFFGGIDVSIRGEVWPFLLRYYSHESTSEEREALR 455
Query: 381 RRKSEEYYKLRDTWKDLLKRGQMVGD-----LAYVTGMVRKDVLRTDRHHVFYAGADDNC 435
+K +EY +++ KR M + V V KDV+RTDR++ F+ G +DN
Sbjct: 456 LQKRKEYSEIQQ------KRLSMTPEEHRAFWRNVQFTVDKDVVRTDRNNQFFRG-EDNP 508
Query: 436 NVISLFNILTTYALNHPAVSYCQGMSDLASPLLVTMSNEAHAYICFCALMRRLGRNFLVD 495
NV S+ IL YA+ +PAV Y QGMSDL +P+L + +E+ + CF LM+
Sbjct: 509 NVESMRRILLNYAVYNPAVGYSQGMSDLVAPILAEVLDESDTFWCFVGLMQNTIFVSSPR 568
Query: 496 GITMTQRFQHLADGLEYYHPKFYEYLKSHQADDL--LYCYRWLLLEMKREFAFNDALIML 553
M ++ +L + L H +FY++L S D L L+C+RWLLL KREF +AL +
Sbjct: 569 DEDMEKQLLYLRELLRLTHVRFYQHLVSLGEDGLQMLFCHRWLLLCFKREFPEAEALRIW 628
Query: 554 EVMWS 558
E W+
Sbjct: 629 EACWA 633
Score = 38.5 bits (88), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 22/35 (62%)
Query: 6 EKADDLLYCYRWLLLEMKREFAFNDALIMLEVMWS 40
E +L+C+RWLLL KREF +AL + E W+
Sbjct: 599 EDGLQMLFCHRWLLLCFKREFPEAEALRIWEACWA 633
>sp|P09379|GYP7_YARLI GTPase-activating protein GYP7 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=GYP7 PE=3 SV=2
Length = 730
Score = 129 bits (324), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 135/271 (49%), Gaps = 38/271 (14%)
Query: 318 RSPLNDTEFRQFLDPVGQIIQS-RELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKER 376
R+ ++ E+ F D G++I + E++ I++GG+ P++R W +L VYP + ER
Sbjct: 355 RNEVSLAEWNAFFDYNGRLIVTVNEVKERIFHGGLAPAVRPEGWLFLLGVYPWDSTAAER 414
Query: 377 MEYTRRKSEEYYKLRDTW-------KDLLKRGQMVGDLAYVTGMVRKDVLRTDRHHVFYA 429
E + +Y +L+ W +D R Q+ + KDV RTDR+ F+A
Sbjct: 415 KELVSKLRVDYNRLKKEWWVQEDKERDDFWRDQL--------SRIEKDVHRTDRNITFFA 466
Query: 430 GAD----------------------DNCNVISLFNILTTYALNHPAVSYCQGMSDLASPL 467
D N ++I L ++L TY ++ + Y QGMSDL SPL
Sbjct: 467 ECDAKKDGDDDNYDKDEFGFSSQINSNIHLIQLRDMLITYNQHNKNLGYVQGMSDLLSPL 526
Query: 468 LVTMSNEAHAYICFCALMRRLGRNFLVDGITMTQRFQHLADGLEYYHPKFYEYLKSHQAD 527
V + ++ A+ F A M R+ RN+L D M + L +++ P Y++L+ ++
Sbjct: 527 YVVLQDDTLAFWAFSAFMERMERNYLRDQSGMRNQLLCLDHLVQFMLPSLYKHLEKTEST 586
Query: 528 DLLYCYRWLLLEMKREFAFNDALIMLEVMWS 558
+L + +R LL+ KRE ++D L + EV+W+
Sbjct: 587 NLFFFFRMLLVWFKRELLWDDVLRLWEVLWT 617
Score = 37.0 bits (84), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 3 LEKEKADDLLYCYRWLLLEMKREFAFNDALIMLEVMWS 40
LEK ++ +L + +R LL+ KRE ++D L + EV+W+
Sbjct: 580 LEKTESTNLFFFFRMLLVWFKRELLWDDVLRLWEVLWT 617
>sp|Q9UUH7|GYP7_SCHPO GTPase-activating protein gyp7 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gyp7 PE=3 SV=1
Length = 743
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 144/288 (50%), Gaps = 24/288 (8%)
Query: 288 TDTQVEKTFNIFKGALSYMEDNMAALYLPPRSPLNDTEFRQFLDPVGQI-IQSRELRTVI 346
TD Q E+ ++ L Y+E+ + PL+ ++ + G++ + + +I
Sbjct: 353 TDAQREEDSSLGPFELVYIEERVKR-----DDPLSVEQWNSMFNAHGKLQVDVHRVLGII 407
Query: 347 YYGGIEPSLRRVVWKHILNVYPEGMSGKERMEYTRRKSEEYYKLRDTW-KDLLKRGQMVG 405
++GGI+PSLR+ VW +L+VYP + +ER EEY L+ W +D+ K+
Sbjct: 408 FHGGIQPSLRKEVWPFLLSVYPWDSTSEERRVIYLSLQEEYCTLKRKWYEDIHKQ---FN 464
Query: 406 DLAYVT--GMVRKDVLRTDRHHVFYAGAD------------DNCNVISLFNILTTYALNH 451
D ++ + KDV RTDR H ++ D N N+ + +IL TY
Sbjct: 465 DRWFIEQRNRIEKDVHRTDRQHEYFQIEDLPHPDPQSTFTGTNMNMEMMKDILLTYNEYD 524
Query: 452 PAVSYCQGMSDLASPLLVTMSNEAHAYICFCALMRRLGRNFLVDGITMTQRFQHLADGLE 511
+ Y QGMSDL +P+ VT ++ A + LM+RL NFL D M ++ L +E
Sbjct: 525 TELGYVQGMSDLLAPIYVTFNDNALTFWGMVGLMKRLHFNFLRDQSGMHRQLDTLRLLIE 584
Query: 512 YYHPKFYEYLKSHQADDLLYCYRWLLLEMKREFAFNDALIMLEVMWSS 559
+ P+ + +L+ + +L +R LL+ KREF + L + +V++++
Sbjct: 585 FMDPELFAHLEKTDSSNLFCFFRMLLIYFKREFDWEVLLKLWDVLFTN 632
>sp|Q6FWI1|GYP7_CANGA GTPase-activating protein GYP7 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=GYP7 PE=3 SV=1
Length = 745
Score = 118 bits (295), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 126/265 (47%), Gaps = 24/265 (9%)
Query: 320 PLNDTEFRQFLDPVGQI-IQSRELRTVIYYGGI-EPSLRRVVWKHILNVYPEGMSGKERM 377
P+ ++ D G++ + E++ I++GG+ + + R+ VW +L VYP S ER
Sbjct: 359 PMTKQKWNSLFDSEGRLTVTVNEVKDYIFHGGLADDATRKEVWPFLLGVYPWDSSEDERK 418
Query: 378 EYTRRKSEEYYKLRDTWKDLLKRGQMVGDLAYVTGMVR--KDVLRTDRH-HVFYAGADDN 434
+ + +EY +L+ W D + + + R KDV R DR+ ++ DN
Sbjct: 419 QLRKALHDEYMELKQKWVDREVNLDNDEEEYWKDQLFRIEKDVKRNDRNIDIYKYNTSDN 478
Query: 435 C-------------------NVISLFNILTTYALNHPAVSYCQGMSDLASPLLVTMSNEA 475
N+ L +ILTTY + +P + Y QGM+DL SPL + +E
Sbjct: 479 LPFPEDTAPTTDDDDSIKNPNLKKLADILTTYNIFNPNLGYVQGMTDLLSPLYYIIRDEE 538
Query: 476 HAYICFCALMRRLGRNFLVDGITMTQRFQHLADGLEYYHPKFYEYLKSHQADDLLYCYRW 535
+ CF M R+ RNFL D + + L D + P+ +L+ + DL +C+R
Sbjct: 539 TTFWCFTNFMERMERNFLRDQSGIRDQMLALTDLCQLMLPRLSAHLQKCDSSDLFFCFRM 598
Query: 536 LLLEMKREFAFNDALIMLEVMWSSL 560
LL+ KREF ++D + EV ++
Sbjct: 599 LLVWFKREFNYDDIFNIWEVFFTDF 623
Score = 35.8 bits (81), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 3 LEKEKADDLLYCYRWLLLEMKREFAFNDALIMLEVMWSSL 42
L+K + DL +C+R LL+ KREF ++D + EV ++
Sbjct: 584 LQKCDSSDLFFCFRMLLVWFKREFNYDDIFNIWEVFFTDF 623
>sp|Q6BU76|GYP7_DEBHA GTPase-activating protein GYP7 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=GYP7 PE=3 SV=2
Length = 757
Score = 115 bits (287), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 133/290 (45%), Gaps = 62/290 (21%)
Query: 318 RSPLNDTEFRQFLDPVGQIIQS-RELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKER 376
R P++ E+ D G++I S E++ I++GG+E +R W +LNVYP S +ER
Sbjct: 362 RKPISKVEWEGLFDFSGRLIISIDEIKDRIFHGGLEDCIRGEAWLFLLNVYPWDSSAEER 421
Query: 377 --MEYTRRKSEEYYKLR----------DTWKDLLKRGQMVGDLAYVTGMVRKDVLRTDRH 424
+ + + + E KL+ D WKD R + KD+ RTDR+
Sbjct: 422 KTLRNSFQTAYEEIKLKWVNDDDKRSVDFWKDQKHR-------------IEKDINRTDRN 468
Query: 425 HVFYAG---------------------------ADD---------NCNVISLFNILTTYA 448
+ ADD N ++ + IL TY
Sbjct: 469 LSIFQNKKKISISGVGSDRLPTTRESSPETPDEADDDEFDVSNITNPHLFKMREILLTYN 528
Query: 449 LNHPAVSYCQGMSDLASPLLVTMSNEAHAYICFCALMRRLGRNFLVDGITMTQRFQHLAD 508
++ + Y QGM+DL SPL VT +E+ + F M R+ RNFL D M + L +
Sbjct: 529 EHNVNLGYVQGMTDLLSPLYVTFQDESLTFWAFVNFMDRMERNFLRDQSGMKNQMLTLNE 588
Query: 509 GLEYYHPKFYEYLKSHQADDLLYCYRWLLLEMKREFAFNDALIMLEVMWS 558
+++ P +++L+ ++ DL + +R LL+ KREF ++ L + E++W+
Sbjct: 589 LVQFMLPDLFKHLEKCESTDLYFFFRMLLVWFKREFEWSSVLSLWEILWT 638
Score = 36.2 bits (82), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 26/38 (68%)
Query: 3 LEKEKADDLLYCYRWLLLEMKREFAFNDALIMLEVMWS 40
LEK ++ DL + +R LL+ KREF ++ L + E++W+
Sbjct: 601 LEKCESTDLYFFFRMLLVWFKREFEWSSVLSLWEILWT 638
>sp|P48365|GYP7_YEAST GTPase-activating protein GYP7 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GYP7 PE=1 SV=1
Length = 746
Score = 112 bits (279), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 133/285 (46%), Gaps = 41/285 (14%)
Query: 315 LPPRSPLNDTEFRQFLDPV-GQI-IQSRELRTVIYYGGIE-PSLRRVVWKHILNVYPEGM 371
L + PL + ++ D G++ + E++ I++GG+E SLR VW +L +YP
Sbjct: 347 LQRQFPLTEAKWNSLWDENDGRLRVTVNEVKDFIFHGGLENDSLRGKVWGFLLEIYPWDS 406
Query: 372 SGKERMEYTRRKSEEYYKLRDTW-KDLLKRGQMVGDLAYVTGMVR--KDVLRTDRHHVFY 428
S ER++ + + EY +L+ TW KD L+ + + + R KDV R DR+ +
Sbjct: 407 SQDERVQIDQTLAAEYDQLKLTWSKDFLQFDDEDEEEYWNDQLFRISKDVRRCDRNLEIF 466
Query: 429 A--------------------------------GADD---NCNVISLFNILTTYALNHPA 453
ADD N ++I L NIL TY + +
Sbjct: 467 QYNTIDGLPPPPQQLPANENNSTSPESANDESDDADDGVRNPHLIHLQNILITYNVYNTN 526
Query: 454 VSYCQGMSDLASPLLVTMSNEAHAYICFCALMRRLGRNFLVDGITMTQRFQHLADGLEYY 513
+ Y QGM+DL SP+ V M E + CF M + RNFL D + ++ L + ++
Sbjct: 527 LGYVQGMTDLLSPIYVIMKEEWKTFWCFTHFMDIMERNFLRDQSGIHEQMLTLVELVQLM 586
Query: 514 HPKFYEYLKSHQADDLLYCYRWLLLEMKREFAFNDALIMLEVMWS 558
P+ E+L + +L +C+R LL+ KREF D + + E W+
Sbjct: 587 LPELSEHLNKCDSGNLFFCFRMLLVWFKREFEMEDIMHIWENFWT 631
>sp|Q2NKQ1|SGSM1_HUMAN Small G protein signaling modulator 1 OS=Homo sapiens GN=SGSM1 PE=1
SV=2
Length = 1148
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 84/149 (56%), Gaps = 10/149 (6%)
Query: 414 VRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPAVSYCQGMSDLASPLLVTMSN 473
+ KDV R DR++ ++ A N+ L NI+ +Y H + Y QGM DL +PLLV + +
Sbjct: 939 IEKDVQRCDRNYWYFTPA----NLEKLRNIMCSYIWQHIEIGYVQGMCDLLAPLLVILDD 994
Query: 474 EAHAYICFCALMRRLGRNFLVDGITMTQRFQHLADGLEYYHPKFYEYLKSHQADD---LL 530
EA A+ CF LM+R+ +NF G M F ++ ++ + +E + HQ D
Sbjct: 995 EALAFSCFTELMKRMNQNF-PHGGAMDTHFANMRSLIQILDSELFELM--HQNGDYTHFY 1051
Query: 531 YCYRWLLLEMKREFAFNDALIMLEVMWSS 559
+CYRW LL+ KRE ++D ++ E +W++
Sbjct: 1052 FCYRWFLLDFKRELVYDDVFLVWETIWAA 1080
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 338 QSRELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKERMEYTRRKSEEYYKLRDTW 394
+ +EL +IYYGGI+P +R+ VW +L Y GM+ ER E + Y + W
Sbjct: 605 EEQELLRLIYYGGIQPEIRKAVWPFLLGHYQFGMTETERKEVDEQIHACYAQTMAEW 661
Score = 42.4 bits (98), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 13 YCYRWLLLEMKREFAFNDALIMLEVMWSS 41
+CYRW LL+ KRE ++D ++ E +W++
Sbjct: 1052 FCYRWFLLDFKRELVYDDVFLVWETIWAA 1080
Score = 37.0 bits (84), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 12/48 (25%), Positives = 33/48 (68%)
Query: 950 FLMFLCISVLCQHSEHIMNHHMDYNEMAIYFDKMVRKHNVHKVLNEAR 997
+++F+ ++++ + + I+ ++MD+ ++ +F++M +HN +VL AR
Sbjct: 1088 YVLFIALALVEVYRDIILENNMDFTDIIKFFNEMAERHNTKQVLKLAR 1135
>sp|Q8BPQ7|SGSM1_MOUSE Small G protein signaling modulator 1 OS=Mus musculus GN=Sgsm1 PE=2
SV=2
Length = 1093
Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 414 VRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPAVSYCQGMSDLASPLLVTMSN 473
+ KDV R DR + ++ A N+ L NI+ +Y H + Y QGM DL +PLLV + +
Sbjct: 884 IEKDVQRCDRSYWYFTAA----NLEKLRNIMCSYIWQHIEIGYVQGMCDLLAPLLVILDD 939
Query: 474 EAHAYICFCALMRRLGRNFLVDGITMTQRFQHLADGLEYYHPKFYEYLKSHQADD---LL 530
EA A+ CF LM+R+ +NF G M F ++ ++ + +E + HQ D
Sbjct: 940 EALAFSCFTELMKRMNQNF-PHGGAMDTHFANMRSLIQILDSELFELM--HQNGDYTHFY 996
Query: 531 YCYRWLLLEMKREFAFNDALIMLEVMWSS 559
+CYRW LL+ KRE ++D + E +W++
Sbjct: 997 FCYRWFLLDFKRELVYDDVFSVWETIWAA 1025
Score = 47.0 bits (110), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 340 RELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKERMEYTRRKSEEYYKLRDTW 394
+EL +IYYGG++P +RR VW +L Y GM+ ER E + Y + W
Sbjct: 552 QELLRLIYYGGVQPEIRRAVWPFLLGHYQFGMTEMERKEVDEQIHACYAQTMSEW 606
Score = 40.4 bits (93), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 13 YCYRWLLLEMKREFAFNDALIMLEVMWSS 41
+CYRW LL+ KRE ++D + E +W++
Sbjct: 997 FCYRWFLLDFKRELVYDDVFSVWETIWAA 1025
Score = 36.2 bits (82), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 11/48 (22%), Positives = 33/48 (68%)
Query: 950 FLMFLCISVLCQHSEHIMNHHMDYNEMAIYFDKMVRKHNVHKVLNEAR 997
+++F+ ++++ + + I+ ++MD+ ++ +F++M +HN ++L AR
Sbjct: 1033 YVLFIALALVEVYRDIILENNMDFTDIIKFFNEMAERHNAKQILQLAR 1080
>sp|Q80U12|SGSM2_MOUSE Small G protein signaling modulator 2 OS=Mus musculus GN=Sgsm2 PE=2
SV=2
Length = 1005
Score = 101 bits (251), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 82/149 (55%), Gaps = 10/149 (6%)
Query: 414 VRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPAVSYCQGMSDLASPLLVTMSN 473
+ KDV R DR++ ++ N+ L +I+ +Y H + Y QGM DL +PLLV + N
Sbjct: 796 IDKDVQRCDRNYWYFT----TSNLERLRDIMCSYVWEHLDMGYVQGMCDLLAPLLVILDN 851
Query: 474 EAHAYICFCALMRRLGRNFLVDGITMTQRFQHLADGLEYYHPKFYEYLKSHQADD---LL 530
+ AY CF LM+R+G+NF G M F ++ ++ + +E + HQ D
Sbjct: 852 DQLAYSCFSHLMKRMGQNFPSGG-AMDSHFANMRSLIQILDSELFELM--HQNGDYTHFY 908
Query: 531 YCYRWLLLEMKREFAFNDALIMLEVMWSS 559
+CYRW LL+ KRE + D + EV+W++
Sbjct: 909 FCYRWFLLDFKRELLYEDVFAVWEVIWAA 937
Score = 42.0 bits (97), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 29/55 (52%)
Query: 341 ELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKERMEYTRRKSEEYYKLRDTWK 395
EL +YYGG+E +R+ VW +L Y GMS KE + + Y ++ WK
Sbjct: 557 ELLRQVYYGGVEHEIRKDVWPFLLGHYKFGMSKKEMEQVDTAVAARYQQVLAEWK 611
Score = 41.6 bits (96), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 13 YCYRWLLLEMKREFAFNDALIMLEVMWSS 41
+CYRW LL+ KRE + D + EV+W++
Sbjct: 909 FCYRWFLLDFKRELLYEDVFAVWEVIWAA 937
>sp|O43147|SGSM2_HUMAN Small G protein signaling modulator 2 OS=Homo sapiens GN=SGSM2 PE=1
SV=4
Length = 1006
Score = 100 bits (248), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 83/149 (55%), Gaps = 10/149 (6%)
Query: 414 VRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPAVSYCQGMSDLASPLLVTMSN 473
+ KDV R DR++ ++ N+ L +++ +Y H V Y QGM DL +PLLVT+ N
Sbjct: 797 IDKDVQRCDRNYWYFTPP----NLERLRDVMCSYVWEHLDVGYVQGMCDLLAPLLVTLDN 852
Query: 474 EAHAYICFCALMRRLGRNFLVDGITMTQRFQHLADGLEYYHPKFYEYLKSHQADD---LL 530
+ AY CF LM+R+ +NF +G M F ++ ++ + +E + HQ D
Sbjct: 853 DQLAYSCFSHLMKRMSQNF-PNGGAMDTHFANMRSLIQILDSELFELM--HQNGDYTHFY 909
Query: 531 YCYRWLLLEMKREFAFNDALIMLEVMWSS 559
+CYRW LL+ KRE + D + EV+W++
Sbjct: 910 FCYRWFLLDFKRELLYEDVFAVWEVIWAA 938
Score = 42.0 bits (97), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%)
Query: 341 ELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKERMEYTRRKSEEYYKLRDTWK 395
EL +YYGGIE +R+ VW +L Y GMS KE + + Y ++ WK
Sbjct: 557 ELLRQVYYGGIEHEIRKDVWPFLLGHYKFGMSKKEMEQVDAVVAARYQQVLAEWK 611
Score = 41.6 bits (96), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%)
Query: 13 YCYRWLLLEMKREFAFNDALIMLEVMWSS 41
+CYRW LL+ KRE + D + EV+W++
Sbjct: 910 FCYRWFLLDFKRELLYEDVFAVWEVIWAA 938
>sp|O97790|TBCD1_BOVIN TBC1 domain family member 1 OS=Bos taurus GN=TBC1D1 PE=2 SV=2
Length = 1165
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 98/234 (41%), Gaps = 36/234 (15%)
Query: 343 RTVIYYGGIEPSLRRV--VWKHILN----------------VYPEGMSGKERMEYTRRKS 384
R + Y I P L+ V VW+ IL+ +G+ R E + +
Sbjct: 752 RLKLDYEEITPCLKEVTTVWEKILSTPGRSKIKFDMEKMHSAVGQGVPRHHRGEIWKFLA 811
Query: 385 EEYY---------KLRDT-WKDLLKRGQMVGDLAYVTGMVRKDVLRTDRHHVFYAGADDN 434
E+Y+ + +DT +K+LLK+ L + D+ RT H +Y+ A
Sbjct: 812 EQYHLKHPFPCKQQPKDTPYKELLKQ------LTSQQHAILIDLGRTFPTHPYYS-AQLG 864
Query: 435 CNVISLFNILTTYALNHPAVSYCQGMSDLASPLLVTMS-NEAHAYICFCALMRRLGRNFL 493
+SL+NIL Y+L V YCQG+S +A LL+ M EA + F L + +
Sbjct: 865 AGQLSLYNILKAYSLLDQEVGYCQGLSFVAGILLLHMGEEEAFNMLKFLMFDMGLRKQYR 924
Query: 494 VDGITMTQRFQHLADGLEYYHPKFYEYLKSHQADDLLYCYRWLLLEMKREFAFN 547
D I + + L+ L YH Y +L+ H+ LY W L +F
Sbjct: 925 PDMIILQIQMYQLSRLLHDYHRDLYNHLEEHEIGPSLYAAPWFLTVFASQFPLG 978
>sp|Q08484|GYP1_YEAST GTPase-activating protein GYP1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GYP1 PE=1 SV=1
Length = 637
Score = 65.1 bits (157), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 102/248 (41%), Gaps = 39/248 (15%)
Query: 336 IIQSRELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKERMEYTRRKSEEYYKLRDTWK 395
II ++LR I + GI R VVWK ++ P ++ K + + +RK +EY RD+ K
Sbjct: 267 IINQQDLRQ-ISWNGIPKIHRPVVWKLLIGYLP--VNTKRQEGFLQRKRKEY---RDSLK 320
Query: 396 DLLKRGQMVGDLAYVTGMVRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPAVS 455
Q D+ + D+ RT+ H Y SL IL +A+ HPA
Sbjct: 321 HTFS-DQHSRDIP-TWHQIEIDIPRTNPHIPLYQFKSVQN---SLQRILYLWAIRHPASG 375
Query: 456 YCQGMSDLASPLLVTMSN----------------------------EAHAYICFCALMRR 487
Y QG++DL +P T EA + C L+ +
Sbjct: 376 YVQGINDLVTPFFETFLTEYLPPSQIDDVEIKDPSTYMVDEQITDLEADTFWCLTKLLEQ 435
Query: 488 LGRNFLVDGITMTQRFQHLADGLEYYHPKFYEYLKSHQADDLLYCYRWLLLEMKREFAFN 547
+ N++ + ++ ++L+ ++ Y + ++ + + + +RW+ + REF
Sbjct: 436 ITDNYIHGQPGILRQVKNLSQLVKRIDADLYNHFQNEHVEFIQFAFRWMNCLLMREFQMG 495
Query: 548 DALIMLEV 555
+ M +
Sbjct: 496 TVIRMWDT 503
>sp|Q755I4|GYP5_ASHGO GTPase-activating protein GYP5 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=GYP5
PE=3 SV=2
Length = 829
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Query: 439 SLFNILTTYALNHPAVSYCQGMSDLASPLLVTMSNEAHAYICFCALMRRLGRN--FLVDG 496
SLFN+L Y+L P V Y QGM+ + +PLL+ + EA A+ LM+ G FL D
Sbjct: 427 SLFNVLKAYSLFDPEVGYTQGMAFVTAPLLINVWEEADAFGLLIKLMKNYGLREFFLPDM 486
Query: 497 ITMTQRFQHLADGLEYYHPKFYEYLKSHQADDLLYCYRWLLLEMKREFAFNDALIMLEVM 556
+ + LE P+ Y +L +Y +W L +F L +L+V+
Sbjct: 487 PGLQLKLYEFDRLLEENSPQLYNHLIRLGIRSSMYATQWFLTLFAYKFPLGFVLRILDVI 546
Query: 557 W 557
+
Sbjct: 547 F 547
>sp|Q12344|GYP5_YEAST GTPase-activating protein GYP5 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=GYP5 PE=1 SV=1
Length = 894
Score = 63.5 bits (153), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 41/213 (19%)
Query: 350 GIEPSLRRVVWKHILNVYPEGMSGKERMEYTRRKSEEYYKLRDTWKDLLKRGQMVGDLAY 409
GI P +R ++W+ + N KS E + D ++ LL
Sbjct: 451 GIPPQIRGIIWQLMAN----------------SKSRE---MEDIYETLLD---------- 481
Query: 410 VTGMVRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPAVSYCQGMSDLASPLLV 469
T + + +R D + D + SL+ ++ Y++ P V Y QGM +A+PLL+
Sbjct: 482 -TECLHEATIRRDLRRTKFVAED---KMESLYKVIKVYSVYDPDVGYTQGMGFIAAPLLI 537
Query: 470 TMSNEAHAYICFCALMRRLG-RNFLVDG----ITMTQRFQHLADGLEYYHPKFYEYLKSH 524
NEA ++ LM+ G R + G + M +F L LE + P Y L
Sbjct: 538 NCENEAESFGLLVGLMKNYGLRELFLPGMPGLMLMLYQFDRL---LEEHSPSLYNRLIRE 594
Query: 525 QADDLLYCYRWLLLEMKREFAFNDALIMLEVMW 557
+Y +W L +F L + ++++
Sbjct: 595 GISSTMYATQWFLTFFAYKFPLEFVLRIFDIVF 627
>sp|Q86TI0|TBCD1_HUMAN TBC1 domain family member 1 OS=Homo sapiens GN=TBC1D1 PE=1 SV=2
Length = 1168
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 70/155 (45%), Gaps = 8/155 (5%)
Query: 394 WKDLLKRGQMVGDLAYVTGMVRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPA 453
+K+LLK+ L + D+ RT H +++ A +SL+NIL Y+L
Sbjct: 834 YKELLKQ------LTSQQHAILIDLGRTFPTHPYFS-AQLGAGQLSLYNILKAYSLLDQE 886
Query: 454 VSYCQGMSDLASPLLVTMS-NEAHAYICFCALMRRLGRNFLVDGITMTQRFQHLADGLEY 512
V YCQG+S +A LL+ MS EA + F L + + D I + + L+ L
Sbjct: 887 VGYCQGLSFVAGILLLHMSEEEAFKMLKFLMFDMGLRKQYRPDMIILQIQMYQLSRLLHD 946
Query: 513 YHPKFYEYLKSHQADDLLYCYRWLLLEMKREFAFN 547
YH Y +L+ H+ LY W L +F
Sbjct: 947 YHRDLYNHLEEHEIGPSLYAAPWFLTMFASQFPLG 981
>sp|Q60949|TBCD1_MOUSE TBC1 domain family member 1 OS=Mus musculus GN=Tbc1d1 PE=1 SV=3
Length = 1255
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 70/152 (46%), Gaps = 8/152 (5%)
Query: 394 WKDLLKRGQMVGDLAYVTGMVRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPA 453
+K+LLK+ L + D+ RT H +++ A +SL+NIL Y+L
Sbjct: 921 YKELLKK------LTSQQHAILIDLGRTFPTHPYFS-AQLGAGQLSLYNILKAYSLLDQE 973
Query: 454 VSYCQGMSDLASPLLVTMS-NEAHAYICFCALMRRLGRNFLVDGITMTQRFQHLADGLEY 512
V YCQG+S +A LL+ MS EA + F L + + D I + + L+ L
Sbjct: 974 VGYCQGLSFVAGILLLHMSEEEAFKMLKFLMFDMGLRKQYRPDMIILQIQMYQLSRLLHD 1033
Query: 513 YHPKFYEYLKSHQADDLLYCYRWLLLEMKREF 544
YH Y +L+ H+ LY W L +F
Sbjct: 1034 YHRDLYNHLEEHEIGPSLYAAPWFLTVFASQF 1065
>sp|Q8BYJ6|TBCD4_MOUSE TBC1 domain family member 4 OS=Mus musculus GN=Tbc1d4 PE=1 SV=2
Length = 1307
Score = 60.5 bits (145), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Query: 393 TWKDLLKRGQMVGDLAYVTGMVRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHP 452
++K+LLK+ L + D+ RT H +++ +SLFN+L Y+L
Sbjct: 960 SYKELLKQ------LTAQQHAILVDLGRTFPTHPYFS-VQLGAGQLSLFNLLKAYSLLDK 1012
Query: 453 AVSYCQGMSDLASPLLVTMSNEAHAYICFCALMRRLG--RNFLVDGITMTQRFQHLADGL 510
V YCQG+S +A LL+ MS E A+ LM LG + + D +++ + L+ L
Sbjct: 1013 EVGYCQGISFVAGVLLLHMSEE-QAFEMLKFLMYDLGFRKQYRPDMMSLQIQMYQLSRLL 1071
Query: 511 EYYHPKFYEYLKSHQADDLLYCYRWLLLEMKREFAFNDALIMLEVMW 557
YH + Y +L+ ++ LY W L +F + ++++
Sbjct: 1072 HDYHRELYNHLEENEISPSLYAAPWFLTLFASQFPLGFVARVFDIIF 1118
>sp|O60343|TBCD4_HUMAN TBC1 domain family member 4 OS=Homo sapiens GN=TBC1D4 PE=1 SV=2
Length = 1298
Score = 59.7 bits (143), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 79/167 (47%), Gaps = 10/167 (5%)
Query: 393 TWKDLLKRGQMVGDLAYVTGMVRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHP 452
++K+LLK+ L + D+ RT H +++ +SLFN+L Y+L
Sbjct: 951 SYKELLKQ------LTAQQHAILVDLGRTFPTHPYFS-VQLGPGQLSLFNLLKAYSLLDK 1003
Query: 453 AVSYCQGMSDLASPLLVTMSNEAHAYICFCALMRRLG--RNFLVDGITMTQRFQHLADGL 510
V YCQG+S +A LL+ MS E A+ LM LG + + D +++ + L+ L
Sbjct: 1004 EVGYCQGISFVAGVLLLHMSEE-QAFEMLKFLMYDLGFRKQYRPDMMSLQIQMYQLSRLL 1062
Query: 511 EYYHPKFYEYLKSHQADDLLYCYRWLLLEMKREFAFNDALIMLEVMW 557
YH Y +L+ ++ LY W L +F+ + ++++
Sbjct: 1063 HDYHRDLYNHLEENEISPSLYAAPWFLTLFASQFSLGFVARVFDIIF 1109
>sp|Q92738|US6NL_HUMAN USP6 N-terminal-like protein OS=Homo sapiens GN=USP6NL PE=1 SV=3
Length = 828
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 417 DVLRTDRHHVFYAGADDNCNVI--SLFNILTTYALNHPAVSYCQGMSDLASPLLVTMSNE 474
DV RT R H+ + D V SLF++L Y++ + V YCQGMS + + LL+ M NE
Sbjct: 147 DVNRTFRDHIMFR---DRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYM-NE 202
Query: 475 AHAYICFCALM---RRLGRNFLVDGITMTQRFQ-HLADGLEYYHPKFYEYLKSHQADDLL 530
A+ L + F V G RFQ H L + K ++L S +
Sbjct: 203 EDAFWALVKLFSGPKHAMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSF 262
Query: 531 YCYRWLL 537
Y +W
Sbjct: 263 YTMKWFF 269
>sp|Q80XC3|US6NL_MOUSE USP6 N-terminal-like protein OS=Mus musculus GN=Usp6nl PE=1 SV=2
Length = 819
Score = 55.8 bits (133), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 57/127 (44%), Gaps = 10/127 (7%)
Query: 417 DVLRTDRHHVFYAGADDNCNVI--SLFNILTTYALNHPAVSYCQGMSDLASPLLVTMSNE 474
DV RT R H+ + D V SLF++L Y++ + V YCQGMS + + LL+ M NE
Sbjct: 147 DVNRTFRDHIMFR---DRYGVKQQSLFHVLAAYSIYNTEVGYCQGMSQITALLLMYM-NE 202
Query: 475 AHAYICFCALM---RRLGRNFLVDGITMTQRFQ-HLADGLEYYHPKFYEYLKSHQADDLL 530
A+ L + F V G RFQ H L + K ++L S +
Sbjct: 203 EDAFWALVKLFSGPKHAMHGFFVQGFPKLLRFQEHHEKILNKFLSKLKQHLDSQEIYTSF 262
Query: 531 YCYRWLL 537
Y +W
Sbjct: 263 YTMKWFF 269
>sp|O60347|TBC12_HUMAN TBC1 domain family member 12 OS=Homo sapiens GN=TBC1D12 PE=1 SV=3
Length = 775
Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 89/212 (41%), Gaps = 14/212 (6%)
Query: 332 PVGQIIQSRELRTVIYYGGIEPSLRRVVWK----HILNVYPEGMSGKERMEYTRRKSEEY 387
P ++++S +++ G+ PS+R VW + LN+ PE + R E +
Sbjct: 466 PNWEVMRSTRRVRELWWQGLPPSVRGKVWSLAVGNELNITPELYE-----IFLSRAKERW 520
Query: 388 YKLRDTWKDLLKRGQMVGDLAYVTGMVRKDVLRTDRHHVFYAGADDNCNVISLFNILTTY 447
+T + G V D +++ D+ RT + +V L +IL Y
Sbjct: 521 KSFSETSSENDTEGVSVADREASLELIKLDISRTFPSLYIFQKGGPYHDV--LHSILGAY 578
Query: 448 ALNHPAVSYCQGMSDLASPLLVTMSNEAHAYICFCALMRRLGR--NFLVDGITMTQRFQH 505
P V Y QGMS +A+ L++ + EA A+I F L+ + + F VD M + F
Sbjct: 579 TCYRPDVGYVQGMSFIAAVLILNL-EEADAFIAFANLLNKPCQLAFFRVDHSMMLKYFAT 637
Query: 506 LADGLEYYHPKFYEYLKSHQADDLLYCYRWLL 537
E K + + KS+ +Y W+
Sbjct: 638 FEVFFEENLSKLFLHFKSYSLTPDIYLIDWIF 669
>sp|O59737|GYP1_SCHPO GTPase-activating protein gyp1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=gyp1 PE=3 SV=1
Length = 514
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/254 (23%), Positives = 106/254 (41%), Gaps = 34/254 (13%)
Query: 325 EFRQFLDPVGQIIQSRELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKERMEYTRRKS 384
+F + LD I+ LRT + + GI R +VWK++L P S +E +RK
Sbjct: 194 KFSRILD--APIVDLNALRT-LAWNGIPSEHRPIVWKYLLGYLPCNASRREVT--LKRKR 248
Query: 385 EEYYKLRDTWKDLLKRGQMVGDLAYVTGMVRKDVLRTDRHHVFYAGADDNCNVISLFNIL 444
+EY +D+ + + + ++ DV RT+ + Y + L IL
Sbjct: 249 DEYNAAKDSCFNTNTEPPPLDQTIWRQIVL--DVPRTNPSILLY---QNPLTQRMLERIL 303
Query: 445 TTYALNHPAVSYCQGMSDLASPLL-VTMSN-----------------------EAHAYIC 480
+A HPA Y QG+SDL +P + V +S EA AY C
Sbjct: 304 YVWASRHPASGYVQGISDLVTPFIQVFLSEYIGDKDPMTYDIALLDETNRNDIEADAYWC 363
Query: 481 FCALMRRLGRNFLVDGITMTQRFQHLADGLEYYHPKFYEYLKSHQADDLLYCYRWLLLEM 540
L+ + N++ + ++ +L + ++L+ D L + +RW+ +
Sbjct: 364 LSKLLDGIQDNYIHAQPGIRRQVNNLRELTLRIDEPLVKHLQMEGVDFLQFSFRWMNCLL 423
Query: 541 KREFAFNDALIMLE 554
RE + ++ + M +
Sbjct: 424 MRELSISNIIRMWD 437
>sp|Q9BYX2|TBD2A_HUMAN TBC1 domain family member 2A OS=Homo sapiens GN=TBC1D2 PE=1 SV=3
Length = 928
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 104/246 (42%), Gaps = 39/246 (15%)
Query: 323 DTEFRQFLDPVGQIIQSRELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKERMEYTRR 382
D R+ +G ++ S EL+ ++ G+ R VW+ ++++ R+++
Sbjct: 599 DRPLRERWAALGDLVPSAELKQLLR-AGVPREHRPRVWRWLVHL---------RVQHLHT 648
Query: 383 KSEEYYKLRDTWKDLLKRGQMVGDLAYVTGMVRKDVLRTDRHHVFYAGADDNCNVIS--- 439
+++LL RGQ A + D+ RT F C S
Sbjct: 649 PG--------CYQELLSRGQAREHPA--ARQIELDLNRT-----FPNNKHFTCPTSSFPD 693
Query: 440 -LFNILTTYALNHPAVSYCQGMSDLASPLLVTMSNEAHAYICFCALMRR-LGRNFLVDGI 497
L +L ++ +P + YCQG++ LA+ L+ + E A+ C A++ + ++ + +
Sbjct: 694 KLRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEEEESAFWCLVAIVETIMPADYYCNTL 753
Query: 498 TMTQRFQH-LADGLEYYHPKFYEYLKSHQADDLLYCYRWLLLEMKREFAFNDALI--MLE 554
T +Q Q L D L P+ +L H D L + W L+ F D+LI +L
Sbjct: 754 TASQVDQRVLQDLLSEKLPRLMAHLGQHHVDLSLVTFNWFLV------VFADSLISNILL 807
Query: 555 VMWSSL 560
+W +
Sbjct: 808 RVWDAF 813
>sp|Q96CN4|EVI5L_HUMAN EVI5-like protein OS=Homo sapiens GN=EVI5L PE=1 SV=1
Length = 794
Score = 53.5 bits (127), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 88/202 (43%), Gaps = 34/202 (16%)
Query: 358 VVWKHILNVYPEGMSGKERM--EYTRRKSEEYYK--------------LRDTWKDLLKRG 401
++W I N + E KE++ E R+ +++ +++ + +LLK
Sbjct: 88 ILWGRIANEWEEWRRRKEKLLKELIRKGIPHHFRAIVWQLLCSATDMPVKNQYSELLKMS 147
Query: 402 QMVGDLAYVTGMVRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPAVSYCQGMS 461
+ ++R+D+ RT H F+ G D + LFN++ Y+L V YCQG +
Sbjct: 148 ------SPCEKLIRRDIARTYPEHEFFKGQDSLGQEV-LFNVMKAYSLVDREVGYCQGSA 200
Query: 462 DLASPLLVTMSNEAHAYICFCALM-----RRLGRNFLVD-GITMTQRFQHLADGLEYYHP 515
+ LL+ M E A+ F LM R L + + + G+ + Q F+++ L+ P
Sbjct: 201 FIVGLLLMQMPEE-EAFCVFVRLMQEYRLRELFKPSMAELGLCIYQ-FEYM---LQEQLP 255
Query: 516 KFYEYLKSHQADDLLYCYRWLL 537
+ +S +Y W L
Sbjct: 256 DLNTHFRSQSFHTSMYASSWFL 277
>sp|B1AVH7|TBD2A_MOUSE TBC1 domain family member 2A OS=Mus musculus GN=Tbc1d2 PE=2 SV=1
Length = 922
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 10/125 (8%)
Query: 440 LFNILTTYALNHPAVSYCQGMSDLASPLLVTMSNEAHAYICFCALMRR-LGRNFLVDGIT 498
L +L ++ +P + YCQG++ LA+ L+ + +E A+ C A++ L + +T
Sbjct: 689 LRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEDEESAFWCLVAIVETILPAEYYSKTLT 748
Query: 499 MTQRFQH-LADGLEYYHPKFYEYLKSHQADDLLYCYRWLLLEMKREFAFNDALI--MLEV 555
+Q Q L D L P+ +L H+ D L + W L+ F D+LI +L
Sbjct: 749 ASQVDQRVLQDLLSEKLPRLTAHLGQHRVDLSLITFNWFLV------VFADSLISDILLR 802
Query: 556 MWSSL 560
+W +
Sbjct: 803 VWDAF 807
>sp|Q6A039|TBC12_MOUSE TBC1 domain family member 12 OS=Mus musculus GN=Tbc1d12 PE=1 SV=2
Length = 696
Score = 53.1 bits (126), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 89/212 (41%), Gaps = 14/212 (6%)
Query: 332 PVGQIIQSRELRTVIYYGGIEPSLRRVVWK----HILNVYPEGMSGKERMEYTRRKSEEY 387
P ++++S +++ G+ PS+R VW + LN+ PE + R E +
Sbjct: 387 PNWEVMRSTRRVRELWWQGLPPSVRGKVWSLAVGNELNITPELYE-----IFLSRAKERW 441
Query: 388 YKLRDTWKDLLKRGQMVGDLAYVTGMVRKDVLRTDRHHVFYAGADDNCNVISLFNILTTY 447
++ + G V D +++ D+ RT + +V L +IL Y
Sbjct: 442 KSFSESSSENDTEGLSVADREASLELIKLDISRTFPSLYIFQKGGPYHDV--LHSILGAY 499
Query: 448 ALNHPAVSYCQGMSDLASPLLVTMSNEAHAYICFCALMRRLGR--NFLVDGITMTQRFQH 505
P V Y QGMS +A+ L++ + EA A+I F L+ + + F VD M + F
Sbjct: 500 TCYRPDVGYVQGMSFIAAVLILNL-EEADAFIAFANLLNKPCQLAFFRVDHSMMLKYFAT 558
Query: 506 LADGLEYYHPKFYEYLKSHQADDLLYCYRWLL 537
E K + + KS+ +Y W+
Sbjct: 559 FEVFFEENLSKLFLHFKSYNLTPDIYLIDWIF 590
>sp|Q9NVG8|TBC13_HUMAN TBC1 domain family member 13 OS=Homo sapiens GN=TBC1D13 PE=1 SV=3
Length = 400
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 20/153 (13%)
Query: 422 DRHHVFYAGADDNCNVISLFNILTTYALNHPAVSYCQGMSDLASPLLVTMSN-------- 473
+ + V G + + V+ IL YA +P ++Y QGM+++ PL T +
Sbjct: 195 NEYEVLPNGCEAHWEVVE--RILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWKE 252
Query: 474 --EAHAYICFCALMRRLGRNFL--VDG--ITMTQRFQHLADGLEYYHPKFYEYLKSHQAD 527
EA + CF LM + NF+ +D +T + + + L+ + Y L+
Sbjct: 253 HAEADTFFCFTNLMAEIRDNFIKSLDDSQCGITYKMEKVYSTLKDKDVELYLKLQEQNIK 312
Query: 528 DLLYCYRWLLLEMKREFAFNDALIMLEVMWSSL 560
+ +RWL L + +EF D + +W SL
Sbjct: 313 PQFFAFRWLTLLLSQEFLLPDVI----RIWDSL 341
>sp|Q8R3D1|TBC13_MOUSE TBC1 domain family member 13 OS=Mus musculus GN=Tbc1d13 PE=2 SV=1
Length = 400
Score = 52.0 bits (123), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 20/153 (13%)
Query: 422 DRHHVFYAGADDNCNVISLFNILTTYALNHPAVSYCQGMSDLASPLLVTMSN-------- 473
+ + V G + + V+ IL YA +P ++Y QGM+++ PL T +
Sbjct: 195 NEYEVLPNGCEAHWEVVE--RILFIYAKLNPGIAYVQGMNEIVGPLYYTFATDPNSEWKE 252
Query: 474 --EAHAYICFCALMRRLGRNFL--VDG--ITMTQRFQHLADGLEYYHPKFYEYLKSHQAD 527
EA + CF LM + NF+ +D +T + + + L+ + Y L+
Sbjct: 253 HAEADTFFCFTNLMAEIRDNFIKSLDDSQCGITYKMEKVYSTLKDKDVELYLKLQEQSIK 312
Query: 528 DLLYCYRWLLLEMKREFAFNDALIMLEVMWSSL 560
+ +RWL L + +EF D + +W SL
Sbjct: 313 PQFFAFRWLTLLLSQEFLLPDVI----RIWDSL 341
>sp|O60447|EVI5_HUMAN Ecotropic viral integration site 5 protein homolog OS=Homo sapiens
GN=EVI5 PE=1 SV=3
Length = 810
Score = 50.4 bits (119), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 63/131 (48%), Gaps = 12/131 (9%)
Query: 413 MVRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPAVSYCQGMSDLASPLLVTMS 472
++R+D+ RT H F+ D + LFN++ Y+L V YCQG + + LL+ M
Sbjct: 201 LIRRDIARTYPEHNFFKEKDSLGQEV-LFNVMKAYSLVDREVGYCQGSAFIVGLLLMQMP 259
Query: 473 NEAHAYICFCALM-----RRLGRNFLVD-GITMTQRFQHLADGLEYYHPKFYEYLKSHQA 526
E A+ F LM R L + + + G+ M Q F+ + ++ + P+ + + +S
Sbjct: 260 EE-EAFCVFVKLMQDYRLRELFKPSMAELGLCMYQ-FECM---IQEHLPELFVHFQSQSF 314
Query: 527 DDLLYCYRWLL 537
+Y W L
Sbjct: 315 HTSMYASSWFL 325
>sp|Q4QQU7|GRTP1_RAT Growth hormone-regulated TBC protein 1 OS=Rattus norvegicus
GN=Grtp1 PE=2 SV=1
Length = 289
Score = 50.1 bits (118), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 397 LLKRGQMVGDLAYVTGMVRK---DVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPA 453
L KR L +G VRK D+ RT +V + D C +L+N+L Y L++
Sbjct: 44 LTKRAIKWSKLLKGSGGVRKSVTDLNRTFPDNVMFRKTADPCLQKTLYNVLLAYGLHNQD 103
Query: 454 VSYCQGMSDLASPLLVTMSNEAHAYICFCALMRRL 488
V YCQGM+ +A L++ NE ++ AL+ R+
Sbjct: 104 VGYCQGMNFIAGYLILITKNEEESFWLLDALVGRI 138
>sp|B5DFA1|TBD2A_RAT TBC1 domain family member 2A OS=Rattus norvegicus GN=Tbc1d2 PE=2
SV=1
Length = 924
Score = 49.7 bits (117), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 58/125 (46%), Gaps = 10/125 (8%)
Query: 440 LFNILTTYALNHPAVSYCQGMSDLASPLLVTMSNEAHAYICFCALMRR-LGRNFLVDGIT 498
L +L ++ +P + YCQG++ LA+ L+ + +E A+ C A++ L + +T
Sbjct: 691 LRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEDEESAFWCLVAIVETILPAEYYSKTLT 750
Query: 499 MTQRFQH-LADGLEYYHPKFYEYLKSHQADDLLYCYRWLLLEMKREFAFNDALI--MLEV 555
+Q Q L D L P+ +L D L + W L+ F D+LI +L
Sbjct: 751 ASQVDQRVLQDLLSEKLPRLTAHLGQRHVDLSLITFNWFLV------IFADSLISDILLR 804
Query: 556 MWSSL 560
+W +
Sbjct: 805 VWDAF 809
>sp|Q9BXI6|TB10A_HUMAN TBC1 domain family member 10A OS=Homo sapiens GN=TBC1D10A PE=1 SV=1
Length = 508
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 81/202 (40%), Gaps = 24/202 (11%)
Query: 350 GIEPSLRRVVWKHILNVYPEGMSGKERMEYTRRKSEEYYKLRDTWKDLLKRGQMVGDLAY 409
GI PSLR W+++ GK +++ K +E D+ GD +
Sbjct: 111 GIPPSLRGRAWQYL-------SGGKVKLQQNPGKFDEL--------DM-----SPGDPKW 150
Query: 410 VTGMVRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPAVSYCQGMSDLASPLLV 469
+ ++ +D+ R H + + LF +L Y L P YCQ + +A+ LL+
Sbjct: 151 LD-VIERDLHRQFPFHEMFVSRGGHGQQ-DLFRVLKAYTLYRPEEGYCQAQAPIAAVLLM 208
Query: 470 TMSNEAHAYICFCALMRRLGRNFLVDGITMTQ-RFQHLADGLEYYHPKFYEYLKSHQADD 528
M E A+ C + + + + + Q + L L+ P +++L + D
Sbjct: 209 HMPAE-QAFWCLVQICEKYLPGYYSEKLEAIQLDGEILFSLLQKVSPVAHKHLSRQKIDP 267
Query: 529 LLYCYRWLLLEMKREFAFNDAL 550
LLY W + R ++ L
Sbjct: 268 LLYMTEWFMCAFSRTLPWSSVL 289
>sp|Q9P2M4|TBC14_HUMAN TBC1 domain family member 14 OS=Homo sapiens GN=TBC1D14 PE=1 SV=3
Length = 693
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 11/204 (5%)
Query: 339 SRELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKERMEYTRRKSEEYYKLRDTWKDLL 398
SR++R +++ GI PS+R VW L + E E + +++E ++ T +
Sbjct: 391 SRKVRD-LWWQGIPPSVRGKVWS--LAIGNELNITHELFDICLARAKERWRSLSTGGSEV 447
Query: 399 KR---GQMVGDLAYVTGMVRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPAVS 455
+ G D +++ D+ RT + + ++ L +IL Y P V
Sbjct: 448 ENEDAGFSAADREASLELIKLDISRTFPNLCIFQQGGPYHDM--LHSILGAYTCYRPDVG 505
Query: 456 YCQGMSDLASPLLVTMSNEAHAYICFCALMRRLGRN--FLVDGITMTQRFQHLADGLEYY 513
Y QGMS +A+ L++ + + A A+I F L+ + + F VD M F E
Sbjct: 506 YVQGMSFIAAVLILNL-DTADAFIAFSNLLNKPCQMAFFRVDHGLMLTYFAAFEVFFEEN 564
Query: 514 HPKFYEYLKSHQADDLLYCYRWLL 537
PK + + K + +Y W+
Sbjct: 565 LPKLFAHFKKNNLTPDIYLIDWIF 588
>sp|Q0IHY4|TBC12_XENTR TBC1 domain family member 12 OS=Xenopus tropicalis GN=tbc1d12 PE=2
SV=1
Length = 684
Score = 49.3 bits (116), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 90/215 (41%), Gaps = 18/215 (8%)
Query: 332 PVGQIIQSRELRTVIYYGGIEPSLRRVVWK----HILNVYPEGMSGKERMEYTRRKSEEY 387
P +++S +++ G+ PS+R VW + LN+ PE + R E +
Sbjct: 374 PNWDVMRSTRRVRDLWWQGLPPSIRGKVWSLAIGNELNITPELYE-----IFLSRAKERW 428
Query: 388 YKLRDTWKDLLKR--GQMVGDLAYVTGMVRKDVLRT-DRHHVFYAGADDNCNVISLFNIL 444
+T + G + D +++ D+ RT ++F G + L +IL
Sbjct: 429 KSFSETNSENENEDAGASLADREASLELIKLDISRTFPSLYIFQKGGPYH---DLLHSIL 485
Query: 445 TTYALNHPAVSYCQGMSDLASPLLVTMSNEAHAYICFCALMRRLGR--NFLVDGITMTQR 502
Y P V Y QGMS +A+ L++ + EA A+I F L+ + + F VD M +
Sbjct: 486 GAYTCYRPDVGYVQGMSFIAAVLILNL-EEADAFIAFANLLNKPCQLAFFRVDHSMMLKY 544
Query: 503 FQHLADGLEYYHPKFYEYLKSHQADDLLYCYRWLL 537
F E PK + + ++ LY W+
Sbjct: 545 FAAFEVFFEENLPKLFFHFNAYSLTPDLYLIDWIF 579
>sp|Q8R5A6|TB22A_MOUSE TBC1 domain family member 22A OS=Mus musculus GN=Tbc1d22a PE=2 SV=3
Length = 516
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/245 (21%), Positives = 91/245 (37%), Gaps = 39/245 (15%)
Query: 325 EFRQFLDPVGQIIQSRELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKERMEYTRRKS 384
+F+Q L G ELR + + GI +R + WK + P + R +RK
Sbjct: 199 KFKQLL--AGPNTDLEELRK-LSWSGIPKPVRPMTWKLLSGYLPANVD--RRPATLQRKQ 253
Query: 385 EEYYKLRDTWKDLLKRGQMVGDLAYVTGMVRKDVLRTDRHHVFYAGADDNCNVISLF-NI 443
+EY+ + + R V Y + D+ R + V +F I
Sbjct: 254 KEYFAFIEHYYS--SRNDEVHQDTY--RQIHIDIPRMSPEALIL-----QPKVTEIFERI 304
Query: 444 LTTYALNHPAVSYCQGMSDLASPLLVTM------------------------SNEAHAYI 479
L +A+ HPA Y QG++DL +P V + EA Y
Sbjct: 305 LFIWAIRHPASGYVQGINDLVTPFFVVFICEYTDREDVDKVDVSSVPAEVLRNIEADTYW 364
Query: 480 CFCALMRRLGRNFLVDGITMTQRFQHLADGLEYYHPKFYEYLKSHQADDLLYCYRWLLLE 539
C L+ + N+ + + + L + + + + +L H+ L + +RW+
Sbjct: 365 CMSKLLDGIQDNYTFAQPGIQMKVKMLEELVSRIDERVHRHLDGHEVRYLQFAFRWMNNL 424
Query: 540 MKREF 544
+ RE
Sbjct: 425 LMREL 429
>sp|Q8WUA7|TB22A_HUMAN TBC1 domain family member 22A OS=Homo sapiens GN=TBC1D22A PE=1 SV=2
Length = 517
Score = 48.5 bits (114), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 92/244 (37%), Gaps = 39/244 (15%)
Query: 325 EFRQFLDPVGQIIQSRELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKERMEYTRRKS 384
+F+Q L G ELR + + GI +R + WK + P + R +RK
Sbjct: 200 KFKQLL--AGPNTDLEELRR-LSWSGIPKPVRPMTWKLLSGYLPANVD--RRPATLQRKQ 254
Query: 385 EEYYKLRDTWKDLLKRGQMVGDLAYVTGMVRKDVLRTDRHHVFYAGADDNCNVISLF-NI 443
+EY+ + + D R V Y + D+ R + V +F I
Sbjct: 255 KEYFAFIEHYYD--SRNDEVHQDTY--RQIHIDIPRMSPEALIL-----QPKVTEIFERI 305
Query: 444 LTTYALNHPAVSYCQGMSDLASPLLVTM------------------------SNEAHAYI 479
L +A+ HPA Y QG++DL +P V + EA Y
Sbjct: 306 LFIWAIRHPASGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLCNIEADTYW 365
Query: 480 CFCALMRRLGRNFLVDGITMTQRFQHLADGLEYYHPKFYEYLKSHQADDLLYCYRWLLLE 539
C L+ + N+ + + + L + + + + +L H+ L + +RW+
Sbjct: 366 CMSKLLDGIQDNYTFAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFRWMNNL 425
Query: 540 MKRE 543
+ RE
Sbjct: 426 LMRE 429
>sp|P58802|TB10A_MOUSE TBC1 domain family member 10A OS=Mus musculus GN=Tbc1d10a PE=1 SV=1
Length = 500
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 81/202 (40%), Gaps = 24/202 (11%)
Query: 350 GIEPSLRRVVWKHILNVYPEGMSGKERMEYTRRKSEEYYKLRDTWKDLLKRGQMVGDLAY 409
GI PSLR W+++ GK +++ K +E D+ GD +
Sbjct: 111 GIPPSLRGRAWQYL-------SGGKVKLQQNPGKFDEL--------DM-----SPGDPKW 150
Query: 410 VTGMVRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPAVSYCQGMSDLASPLLV 469
+ ++ +D+ R H + + LF +L Y L P YCQ + +A+ LL+
Sbjct: 151 LD-VIERDLHRQFPFHEMFVSRGGHGQQ-DLFRVLKAYTLYRPEEGYCQAQAPIAAVLLM 208
Query: 470 TMSNEAHAYICFCALMRRLGRNFLVDGITMTQ-RFQHLADGLEYYHPKFYEYLKSHQADD 528
M E A+ C + + + + + Q + L L+ P +++L + D
Sbjct: 209 HMPAE-QAFWCLVQVCEKYLPGYYSEKLEAIQLDGEILFSLLQKVSPVAHKHLSRQKIDP 267
Query: 529 LLYCYRWLLLEMKREFAFNDAL 550
LLY W + R ++ L
Sbjct: 268 LLYMTEWFMCAFARTLPWSSVL 289
>sp|Q6PBU5|GRT1A_DANRE Growth hormone-regulated TBC protein 1-A OS=Danio rerio GN=grtp1a
PE=2 SV=1
Length = 356
Score = 48.1 bits (113), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 44/75 (58%)
Query: 414 VRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPAVSYCQGMSDLASPLLVTMSN 473
+R D+ RT ++++ + + C +L+N+L Y ++ AV YCQGM+ +A L++ +
Sbjct: 130 IRTDLHRTFPDNIYFRKSAEPCLQQALYNVLVAYGHHNKAVGYCQGMNFIAGYLILVSKD 189
Query: 474 EAHAYICFCALMRRL 488
E ++ AL+ R+
Sbjct: 190 EETSFWLMEALLSRI 204
>sp|Q8CGA2|TBC14_MOUSE TBC1 domain family member 14 OS=Mus musculus GN=Tbc1d14 PE=2 SV=2
Length = 694
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 10/197 (5%)
Query: 346 IYYGGIEPSLRRVVWKHILNVYPEGMSGKERMEYTRRKSEEYYKLRDTWKDLLKR---GQ 402
+++ GI PS+R VW L + E E + +++E ++ T ++ G
Sbjct: 398 LWWQGIPPSVRGKVWS--LAIGNELNITHELFDICLARAKERWRSLSTGGSEVENEDAGF 455
Query: 403 MVGDLAYVTGMVRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPAVSYCQGMSD 462
D +++ D+ RT + + ++ L +IL Y P V Y QGMS
Sbjct: 456 SAADREASLELIKLDISRTFPNLCIFQQGGPYHDM--LHSILGAYTCYRPDVGYVQGMSF 513
Query: 463 LASPLLVTMSNEAHAYICFCALMRRLGRN--FLVDGITMTQRFQHLADGLEYYHPKFYEY 520
+A+ L++ + + A A+I F L+ + + F VD M F E PK + +
Sbjct: 514 IAAVLILNL-DTADAFIAFSNLLNKPCQMAFFRVDHGLMLTYFAAFEVFFEENLPKLFAH 572
Query: 521 LKSHQADDLLYCYRWLL 537
K + +Y W+
Sbjct: 573 FKKNNLTADIYLIDWIF 589
>sp|Q5CD77|TBC14_RAT TBC1 domain family member 14 OS=Rattus norvegicus GN=Tbc1d14 PE=2
SV=2
Length = 694
Score = 48.1 bits (113), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 83/197 (42%), Gaps = 10/197 (5%)
Query: 346 IYYGGIEPSLRRVVWKHILNVYPEGMSGKERMEYTRRKSEEYYKLRDTWKDLLKR---GQ 402
+++ GI PS+R VW L + E E + +++E ++ T ++ G
Sbjct: 398 LWWQGIPPSVRGKVWS--LAIGNELNITHELFDICLARAKERWRSLSTGGSEVENEDAGF 455
Query: 403 MVGDLAYVTGMVRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPAVSYCQGMSD 462
D +++ D+ RT + + ++ L +IL Y P V Y QGMS
Sbjct: 456 SAADREASLELIKLDISRTFPNLCIFQQGGPYHDM--LHSILGAYTCYRPDVGYVQGMSF 513
Query: 463 LASPLLVTMSNEAHAYICFCALMRRLGRN--FLVDGITMTQRFQHLADGLEYYHPKFYEY 520
+A+ L++ + + A A+I F L+ + + F VD M F E PK + +
Sbjct: 514 IAAVLILNL-DTADAFIAFSNLLNKPCQMAFFRVDHGLMLTYFAAFEVFFEENLPKLFAH 572
Query: 521 LKSHQADDLLYCYRWLL 537
K + +Y W+
Sbjct: 573 FKKNNLTADIYLIDWIF 589
>sp|Q5TC63|GRTP1_HUMAN Growth hormone-regulated TBC protein 1 OS=Homo sapiens GN=GRTP1
PE=1 SV=4
Length = 336
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 42/75 (56%)
Query: 414 VRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPAVSYCQGMSDLASPLLVTMSN 473
+R D+ RT +V + D C +L+N+L Y ++ V YCQGM+ +A L++ +N
Sbjct: 111 IRTDLNRTFPDNVKFRKTTDPCLQRTLYNVLLAYGHHNQGVGYCQGMNFIAGYLILITNN 170
Query: 474 EAHAYICFCALMRRL 488
E ++ AL+ R+
Sbjct: 171 EEESFWLLDALVGRI 185
>sp|D2H0G5|TBD2A_AILME TBC1 domain family member 2A OS=Ailuropoda melanoleuca GN=TBC1D2
PE=3 SV=1
Length = 923
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 10/125 (8%)
Query: 440 LFNILTTYALNHPAVSYCQGMSDLASPLLVTMSNEAHAYICFCALMRR-LGRNFLVDGIT 498
L +L ++ +P + YCQG++ LA+ L+ + E A+ C A++ + ++ +T
Sbjct: 701 LRRVLLAFSWQNPTIGYCQGLNRLAAIALLVLEEEESAFWCLVAIVETIMPADYYSKTLT 760
Query: 499 MTQRFQH-LADGLEYYHPKFYEYLKSHQADDLLYCYRWLLLEMKREFAFNDALI--MLEV 555
+Q Q L D L P+ +L ++ D + W L+ F D+LI +L
Sbjct: 761 SSQVDQRVLQDLLLEKLPRLMAHLGQYRVDLSFLTFNWFLV------VFADSLISNILLR 814
Query: 556 MWSSL 560
+W +
Sbjct: 815 VWDAF 819
>sp|Q95KI1|TB22A_MACFA TBC1 domain family member 22A (Fragment) OS=Macaca fascicularis
GN=TBC1D22A PE=2 SV=2
Length = 497
Score = 47.4 bits (111), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/244 (21%), Positives = 91/244 (37%), Gaps = 39/244 (15%)
Query: 325 EFRQFLDPVGQIIQSRELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKERMEYTRRKS 384
+F Q L G ELR + + GI +R + WK + P + R +RK
Sbjct: 180 KFEQLL--AGPNTDLEELRK-LSWSGIPKPVRPMTWKLLSGYLPANVD--RRPATLQRKQ 234
Query: 385 EEYYKLRDTWKDLLKRGQMVGDLAYVTGMVRKDVLRTDRHHVFYAGADDNCNVISLFN-I 443
+EY+ + + D R V Y + D+ R + V +F I
Sbjct: 235 KEYFAFIEHYYD--SRNDEVHQDTY--RQIHIDIPRMSPEALIL-----QPKVTEIFERI 285
Query: 444 LTTYALNHPAVSYCQGMSDLASPLLVTM------------------------SNEAHAYI 479
L +A+ HPA Y QG++DL +P V + EA Y
Sbjct: 286 LFIWAIRHPASGYVQGINDLVTPFFVVFICEYIEAEEVDTVDVSGVPAEVLRNIEADTYW 345
Query: 480 CFCALMRRLGRNFLVDGITMTQRFQHLADGLEYYHPKFYEYLKSHQADDLLYCYRWLLLE 539
C L+ + N+ + + + L + + + + +L H+ L + +RW+
Sbjct: 346 CMSKLLDGIQDNYTFAQPGIQMKVKMLEELVSRIDEQVHRHLDQHEVRYLQFAFRWMNNL 405
Query: 540 MKRE 543
+ RE
Sbjct: 406 LMRE 409
>sp|A6H7I8|TBC14_BOVIN TBC1 domain family member 14 OS=Bos taurus GN=TBC1D14 PE=2 SV=2
Length = 692
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 11/204 (5%)
Query: 339 SRELRTVIYYGGIEPSLRRVVWKHILNVYPEGMSGKERMEYTRRKSEEYYKLRDTW---K 395
SR++R +++ GI PS+R VW L + E E + +++E ++ T
Sbjct: 390 SRKVRD-LWWQGIPPSVRGKVWS--LAIGNELNITHELFDICLARAKERWRSFSTGGSEA 446
Query: 396 DLLKRGQMVGDLAYVTGMVRKDVLRTDRHHVFYAGADDNCNVISLFNILTTYALNHPAVS 455
+ G D +++ D+ RT + ++ L ++L Y P V
Sbjct: 447 ETEDAGFSAADREASLELIKLDISRTFPSLCIFQQGGPYHDM--LHSVLGAYTCYRPDVG 504
Query: 456 YCQGMSDLASPLLVTMSNEAHAYICFCALMRRLGRN--FLVDGITMTQRFQHLADGLEYY 513
Y QGMS +A+ L++ + + A A+I F L+ + + F VD M F E
Sbjct: 505 YVQGMSFIAAVLILNL-DTADAFIAFSNLLNKPCQMAFFRVDHGLMLTYFAAFEVFFEEN 563
Query: 514 HPKFYEYLKSHQADDLLYCYRWLL 537
PK + + K + +Y W+
Sbjct: 564 LPKLFAHFKKNNLTPDIYLIDWIF 587
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.131 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 376,600,794
Number of Sequences: 539616
Number of extensions: 16290113
Number of successful extensions: 58087
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 96
Number of HSP's successfully gapped in prelim test: 194
Number of HSP's that attempted gapping in prelim test: 52415
Number of HSP's gapped (non-prelim): 2877
length of query: 1018
length of database: 191,569,459
effective HSP length: 128
effective length of query: 890
effective length of database: 122,498,611
effective search space: 109023763790
effective search space used: 109023763790
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)