RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16316
(335 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 109 bits (272), Expect = 3e-28
Identities = 59/304 (19%), Positives = 119/304 (39%), Gaps = 22/304 (7%)
Query: 17 FRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDLIRFTHAKQ 76
+ +T + + +++S SED I ++D E G +RT+ V I F H+ +
Sbjct: 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 72
Query: 77 AAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDL 136
S + + + IR GH V+S+ + P D +S S DKT+++W++
Sbjct: 73 LLASCSADMTIKLWDF--QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEV 130
Query: 137 RSPNCQGIMHV-SGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFD--------KGPFSN 187
++ C + + +G + N T++++ V + + +
Sbjct: 131 QTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVEC 190
Query: 188 FKFAAEKECDWTG-------IKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNK 240
+A E K G ++L + I+ +D G CL TL G N
Sbjct: 191 ISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWV 250
Query: 241 GCPLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQFNPKFNMMAS 300
F K+++S + D + +W+ + + L+A H V ++ F+ + +
Sbjct: 251 RG---VLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNA-HEHFVTSLDFHKTAPYVVT 306
Query: 301 ACTN 304
+
Sbjct: 307 GSVD 310
Score = 72.1 bits (175), Expect = 6e-15
Identities = 29/188 (15%), Positives = 66/188 (35%), Gaps = 19/188 (10%)
Query: 8 IRSYKVAKLFRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVD 67
+++ K F + + + + + DG L+ SCS D + ++ K + ++ V+
Sbjct: 130 VQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVE 189
Query: 68 LIRFTHAKQAAIHASTKI------------------DDTVRYLSLHDNKYIRYFPGHTKK 109
I + + + D T++ + + GH
Sbjct: 190 CISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 249
Query: 110 VNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQGIMHVSGSRPIA-AFDPEGLIFGVGVN 168
V + +S + DKT+R+WD ++ C ++ + F G
Sbjct: 250 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSV 309
Query: 169 SDTIKLYD 176
T+K+++
Sbjct: 310 DQTVKVWE 317
Score = 71.7 bits (174), Expect = 9e-15
Identities = 29/214 (13%), Positives = 72/214 (33%), Gaps = 8/214 (3%)
Query: 103 FPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQGIMHVSGSRPIAAFDPEGLI 162
GH V + P+ +S S D T+++WD + + + +
Sbjct: 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGK 72
Query: 163 FGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRTF 222
+ ++ +D F + + + + + +G +I+ ++ I+ +
Sbjct: 73 L----LASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMW 128
Query: 223 DAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDADH 282
+ G C++T G ++ D + S S D + +W L +H
Sbjct: 129 EVQTGYCVKTFTG---HREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EH 184
Query: 283 PSPVQTIQFNPKFNMMASACTNLAFWIPTYLSNH 316
V+ I + P+ + + + + +
Sbjct: 185 RHVVECISWAPESSYSSISEATGSETKKSGKPGP 218
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 98.3 bits (243), Expect = 6e-24
Identities = 66/302 (21%), Positives = 107/302 (35%), Gaps = 52/302 (17%)
Query: 12 KVAKLFRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDLIRF 71
+ + R + KI ++ + D LL+S S+D +++I+D + + V +
Sbjct: 46 RTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAY 105
Query: 72 THAKQ-------------------------------------------AAIHASTKIDDT 88
+ ++ D T
Sbjct: 106 APSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTT 165
Query: 89 VRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQGIM--H 146
+ + F GHT V SL L+P F+SG+ D + +LWD+R C+ H
Sbjct: 166 CALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225
Query: 147 VSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDWTGIKFSAD 206
S I F P G F G + T +L+D+R+ + + C T + FS
Sbjct: 226 ESDINAIC-FFPNGNAFATGSDDATCRLFDLRADQELMTYSHDN---IICGITSVSFSKS 281
Query: 207 GKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVISGSTDGRIHI 266
G+ +L + +DA LAG N C T D V +GS D + I
Sbjct: 282 GRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSC---LGVTDDGMAVATGSWDSFLKI 338
Query: 267 WN 268
WN
Sbjct: 339 WN 340
Score = 80.6 bits (197), Expect = 1e-17
Identities = 19/128 (14%), Positives = 44/128 (34%)
Query: 8 IRSYKVAKLFRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVD 67
+R + F + I +I + +G + S+D ++D T
Sbjct: 213 VREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICG 272
Query: 68 LIRFTHAKQAAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSY 127
+ + +K + + D GH +V+ L ++ +GS+
Sbjct: 273 ITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSW 332
Query: 128 DKTVRLWD 135
D +++W+
Sbjct: 333 DSFLKIWN 340
Score = 61.3 bits (147), Expect = 3e-11
Identities = 38/256 (14%), Positives = 78/256 (30%), Gaps = 11/256 (4%)
Query: 63 KYGVDLIRFTHAKQAAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTF 122
K + R A + ID R + R GH K+ ++
Sbjct: 15 KNQIRDARKACADATLSQITNNIDPVGRI----QMRTRRTLRGHLAKIYAMHWGTDSRLL 70
Query: 123 ISGSYDKTVRLWDLRSPNCQGIMHVSGSRPIA-AFDPEGLIFGVGVNSDTIKLYDVRSFD 181
+S S D + +WD + N + + S + A+ P G G + +Y++++ +
Sbjct: 71 VSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTRE 130
Query: 182 KGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKG 241
+ + A + + + T
Sbjct: 131 GNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSL 190
Query: 242 CPLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQFNPKFNMMASA 301
PD++ +SG+ D +W+ +G H S + I F P N A+
Sbjct: 191 S-----LAPDTRLFVSGACDASAKLWDVREGMCRQTFT-GHESDINAICFFPNGNAFATG 244
Query: 302 CTNLAFWIPTYLSNHQ 317
+ + ++ +
Sbjct: 245 SDDATCRLFDLRADQE 260
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 87.5 bits (215), Expect = 6e-20
Identities = 49/269 (18%), Positives = 92/269 (34%), Gaps = 20/269 (7%)
Query: 21 TDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDLIRFTHAKQAAIH 80
I S+ +S DG L + +ED I I+D E + + + + + + +
Sbjct: 121 DLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVS 180
Query: 81 ASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPN 140
S D TVR L + +GS D+ VR+WD +
Sbjct: 181 GSG--DRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF 238
Query: 141 CQGIMHVSGSRPIA--------AFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAA 192
+ F +G G ++KL+++++ + S +
Sbjct: 239 LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 298
Query: 193 EKECDW-------TGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGC--- 242
E + + + + +YIL + + +D +G L L G N+
Sbjct: 299 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAV 358
Query: 243 PLEASFTPDSKYVISGSTDGRIHIWNAEK 271
+S P+ +GS D + IW +K
Sbjct: 359 ANGSSLGPEYNVFATGSGDCKARIWKYKK 387
Score = 82.9 bits (203), Expect = 2e-18
Identities = 54/318 (16%), Positives = 117/318 (36%), Gaps = 36/318 (11%)
Query: 19 ENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDLIRFTHAKQAA 78
++T + + +S DG L + + +Y G+ + + +
Sbjct: 60 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSP 118
Query: 79 IH----------------ASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTF 122
A+ D +R + + K + GH + + SL P D
Sbjct: 119 SSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKL 178
Query: 123 ISGSYDKTVRLWDLR-SPNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRS-- 179
+SGS D+TVR+WDLR + G +A +G G ++++D +
Sbjct: 179 VSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGF 238
Query: 180 FDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQT------- 232
+ S + + + F+ DG+ ++ + ++ ++ N
Sbjct: 239 LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSG 298
Query: 233 --LAGFLNNKGCPLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTI- 289
++ +K L + T + +Y++SGS D + W+ + G + +L H + V ++
Sbjct: 299 TCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQG-HRNSVISVA 357
Query: 290 -----QFNPKFNMMASAC 302
P++N+ A+
Sbjct: 358 VANGSSLGPEYNVFATGS 375
Score = 69.4 bits (168), Expect = 7e-14
Identities = 26/137 (18%), Positives = 49/137 (35%), Gaps = 16/137 (11%)
Query: 17 FRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDLIRFTHAKQ 76
+ D + S+ ++ DG ++S S D + +++ + NK + G + + K
Sbjct: 250 GTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKD 309
Query: 77 AAIH----------ASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLC------LSPIDD 120
+ S D V + + GH V S+ L P +
Sbjct: 310 FVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYN 369
Query: 121 TFISGSYDKTVRLWDLR 137
F +GS D R+W +
Sbjct: 370 VFATGSGDCKARIWKYK 386
Score = 54.8 bits (130), Expect = 5e-09
Identities = 40/230 (17%), Positives = 78/230 (33%), Gaps = 34/230 (14%)
Query: 100 IRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQGIMHVSGSRPIA----- 154
+ HT V + S D +++ +KT +++ + + + +
Sbjct: 55 LHKSLDHTSVVCCVKFSN-DGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLN 113
Query: 155 --------------AFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDWTG 200
F P+G G I+++D+ + D
Sbjct: 114 TSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHE-----QDIYS 168
Query: 201 IKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVISGST 260
+ + G ++ + +R +D GQC T G A D KY+ +GS
Sbjct: 169 LDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLT---LSIEDGVTTVAVSPGDGKYIAAGSL 225
Query: 261 DGRIHIWNAEKGFKVCVLDAD------HPSPVQTIQFNPKFNMMASACTN 304
D + +W++E GF V LD++ H V ++ F + S +
Sbjct: 226 DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD 275
Score = 38.2 bits (87), Expect = 0.001
Identities = 25/160 (15%), Positives = 51/160 (31%), Gaps = 27/160 (16%)
Query: 175 YDVRSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLA 234
Y+ R+ P F + + +K + YIL N ++ R D L
Sbjct: 6 YNQRANHSKPIPPFLLDLDSQSVPDALKKQTNDYYILY--NPALPREIDV-------ELH 56
Query: 235 GFLNNKGCPLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDAD------------- 281
L++ F+ D +Y+ +G + ++ G V L D
Sbjct: 57 KSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTS 115
Query: 282 ----HPSPVQTIQFNPKFNMMASACTNLAFWIPTYLSNHQ 317
++++ F+P +A+ + I +
Sbjct: 116 SSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKI 155
Score = 34.0 bits (76), Expect = 0.022
Identities = 30/185 (16%), Positives = 55/185 (29%), Gaps = 22/185 (11%)
Query: 152 PIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDWTG----IKFSADG 207
P D + + T Y + ++ K D T +KFS DG
Sbjct: 17 PPFLLDLDSQSVPDALKKQTNDYYIL--YNPALPREIDVELHKSLDHTSVVCCVKFSNDG 74
Query: 208 KYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEA---------------SFTPDS 252
+Y+ N + + + +G + L+ P F+PD
Sbjct: 75 EYLATGCNKTT-QVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDG 133
Query: 253 KYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQFNPKFNMMASACTNLAFWIPTY 312
K++ +G+ D I IW+ E V +L F +++ +
Sbjct: 134 KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLR 193
Query: 313 LSNHQ 317
Sbjct: 194 TGQCS 198
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 74.5 bits (181), Expect = 1e-15
Identities = 36/236 (15%), Positives = 85/236 (36%), Gaps = 17/236 (7%)
Query: 39 CSEDDQIVIYDCELGTNKRTVFSKKYGVDLIRFTHAKQAAIHASTKIDDTVRYLSLHDNK 98
S D + ++D E G + V +++ + + D V+
Sbjct: 113 GSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAY----DFMVKVWDPETET 168
Query: 99 YIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQGIMHVSGSRPIAAFDP 158
+ GHT +V L +SGS D ++R+WD+ + NC + S + +
Sbjct: 169 CLHTLQGHTNRVY--SLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS-LTSGMEL 225
Query: 159 EGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSI 218
+ I G T+K++D+++ + + +++ S++
Sbjct: 226 KDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTC----LQFNKNFVITSSDDGT 281
Query: 219 IRTFDAYNGQCLQTLAGFLN--NKGCPLEASFTPDSKYVISGSTDG----RIHIWN 268
++ +D G+ ++ L + + G + GS +G ++ + +
Sbjct: 282 VKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLD 337
Score = 70.2 bits (170), Expect = 3e-14
Identities = 50/301 (16%), Positives = 103/301 (34%), Gaps = 22/301 (7%)
Query: 10 SYKVAKLFRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDLI 69
K K+ + + D + + G ++S S+D+ + ++ G RT+ GV
Sbjct: 5 ELKSPKVLKGHDDHVITC-LQFCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSS 63
Query: 70 RFTHAKQAAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDK 129
+ + + + C+ + +SGS D
Sbjct: 64 QMRD------NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDA 117
Query: 130 TVRLWDLRSPNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFK 189
T+R+WD+ + C ++ + + + +K++D +
Sbjct: 118 TLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDF-MVKVWDPETET-------C 169
Query: 190 FAAEKECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFT 249
+ DG +++ + + IR +D G C+ TL G L +
Sbjct: 170 LHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGH-----QSLTSGME 224
Query: 250 PDSKYVISGSTDGRIHIWNAEKGFKVCV--LDADHPSPVQTIQFNPKFNMMASACTNLAF 307
++SG+ D + IW+ + G + H S V +QFN F + +S +
Sbjct: 225 LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKL 284
Query: 308 W 308
W
Sbjct: 285 W 285
Score = 53.3 bits (126), Expect = 1e-08
Identities = 32/160 (20%), Positives = 57/160 (35%), Gaps = 12/160 (7%)
Query: 29 YSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDLIRFTHAKQAAIHASTKIDDT 88
DG+ ++S S D I ++D E G T+ + + I S D T
Sbjct: 183 LQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDN----ILVSGNADST 238
Query: 89 VRYLSLHDNKYIRYFPGHTKKVNSLCL-SPIDDTFISGSYDKTVRLWDLRSPNC------ 141
V+ + + ++ G K +++ + I+ S D TV+LWDL++
Sbjct: 239 VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVT 298
Query: 142 QGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFD 181
G L+ VG + T + + D
Sbjct: 299 LESGGSGGVVWRIRASNTKLVCAVGSRNGTEETK-LLVLD 337
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 73.3 bits (178), Expect = 3e-15
Identities = 50/252 (19%), Positives = 87/252 (34%), Gaps = 10/252 (3%)
Query: 17 FRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDLIRFTHAKQ 76
+ I S DG LI E + I+D T + +
Sbjct: 93 CLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD 152
Query: 77 AAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDL 136
+ + S D + LH+ +R F GHT + + +S +G D TVR WDL
Sbjct: 153 SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDL 212
Query: 137 RSPNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKEC 196
R + + P G VG+ S +++ V DK E
Sbjct: 213 REGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLH------ES 266
Query: 197 DWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVI 256
+KF+ GK+ + + +++ + G + L + D KY++
Sbjct: 267 CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKE----SSSVLSCDISVDDKYIV 322
Query: 257 SGSTDGRIHIWN 268
+GS D + ++
Sbjct: 323 TGSGDKKATVYE 334
Score = 64.1 bits (154), Expect = 4e-12
Identities = 29/289 (10%), Positives = 71/289 (24%), Gaps = 17/289 (5%)
Query: 21 TDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTV-----FSKKYGVDLIRFTHAK 75
+ + ++ S + + + ++D NK V ++ + +
Sbjct: 51 GEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDG 109
Query: 76 QAAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWD 135
I ++ L+ + +L +SP S D + +WD
Sbjct: 110 CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWD 169
Query: 136 LRSPNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKE 195
L + D +
Sbjct: 170 LHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDL-----REGRQLQQHDFT 224
Query: 196 CDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYV 255
+ + G+++ + S + Q ++ C L F K+
Sbjct: 225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQ----LHLHESCVLSLKFAYCGKWF 280
Query: 256 ISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQFNPKFNMMASACTN 304
+S D ++ W G + S V + + + + +
Sbjct: 281 VSTGKDNLLNAWRTPYGASIFQS--KESSSVLSCDISVDDKYIVTGSGD 327
Score = 52.9 bits (125), Expect = 2e-08
Identities = 13/79 (16%), Positives = 19/79 (24%)
Query: 99 YIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQGIMHVSGSRPIAAFDP 158
H V SL + F+S D + W S S
Sbjct: 257 DKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISV 316
Query: 159 EGLIFGVGVNSDTIKLYDV 177
+ G +Y+V
Sbjct: 317 DDKYIVTGSGDKKATVYEV 335
Score = 44.0 bits (102), Expect = 1e-05
Identities = 13/120 (10%), Positives = 40/120 (33%), Gaps = 10/120 (8%)
Query: 203 FSADGKYILISTNG-SIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVISGSTD 261
+ADG+ + ++I + + + TL N+ + + +++V +G
Sbjct: 17 VTADGQMQPVPFPPDALIGPGIPRHARQINTL----NHGEVVCAVTISNPTRHVYTGG-K 71
Query: 262 GRIHIWNAEKGFKVCVL----DADHPSPVQTIQFNPKFNMMASACTNLAFWIPTYLSNHQ 317
G + +W+ + + + +++ + P + I +
Sbjct: 72 GCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTP 131
Score = 40.2 bits (92), Expect = 2e-04
Identities = 24/199 (12%), Positives = 55/199 (27%), Gaps = 13/199 (6%)
Query: 105 GHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQGIMHVSGSRPIAAFDPEGLIFG 164
H + V ++ +S +G V++WD+ P + S + + + I
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNK-----SPVSQLDCLNRDNYIRS 102
Query: 165 VGVNSDTIKL-----YDVRSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSII 219
+ D L S + AE A + +
Sbjct: 103 CKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD 162
Query: 220 RTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLD 279
++ + F + + D + +G D + W+ +
Sbjct: 163 GNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWD--LREGRQLQQ 220
Query: 280 ADHPSPVQTIQFNPKFNMM 298
D S + ++ + P +
Sbjct: 221 HDFTSQIFSLGYCPTGEWL 239
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 73.3 bits (178), Expect = 3e-15
Identities = 38/332 (11%), Positives = 95/332 (28%), Gaps = 21/332 (6%)
Query: 12 KVAKLFRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTV---FSKKYGVDL 68
++ ++ + D I+ I LL+ S D + +Y ++ + K+ +
Sbjct: 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLC 61
Query: 69 IRFTHAKQAAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYD 128
F I+ T + ++ + + DD I+ S+D
Sbjct: 62 CNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWD 121
Query: 129 KTVRLWDLRSPNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYD--VRSFD----K 182
+ + D R+ I + + + + + + + V+ F +
Sbjct: 122 GLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCE 181
Query: 183 GPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGC 242
+ + K + + S+ + + + +
Sbjct: 182 DDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCH 241
Query: 243 PLEA------------SFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQ 290
L F+P K++ + +DG I WN + K+ + V I
Sbjct: 242 RLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA 301
Query: 291 FNPKFNMMASACTNLAFWIPTYLSNHQEPDTI 322
+ +A++ + +I
Sbjct: 302 CSDNILCLATSDDTFKTNAAIDQTIELNASSI 333
Score = 27.1 bits (58), Expect = 3.3
Identities = 14/140 (10%), Positives = 33/140 (23%), Gaps = 45/140 (32%)
Query: 4 TDNVIRSYKVAKLFRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKK 63
R +++ + SI++S L + D I ++
Sbjct: 234 KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWN-------------- 279
Query: 64 YGVDLIRFTHAKQAAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFI 123
L K I+ F + + + ++ D+
Sbjct: 280 ------------------------------LQTRKKIKNFAKFN-EDSVVKIACSDNILC 308
Query: 124 SGSYDKTVRLWDLRSPNCQG 143
+ D T + +
Sbjct: 309 LATSDDTFKTNAAIDQTIEL 328
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 67.2 bits (162), Expect = 4e-13
Identities = 25/242 (10%), Positives = 58/242 (23%), Gaps = 17/242 (7%)
Query: 50 CELGTNKRTVFSKKYGVDLIRFTHAKQAAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKK 109
+ + + + + + ++ + + I
Sbjct: 121 VIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSH 180
Query: 110 VNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQGIMH--------VSGSRPIAAFDPEG- 160
+ SY D N + + GS P
Sbjct: 181 DYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSM 240
Query: 161 -LIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSII 219
G +D K + D G + ++ Y + ++
Sbjct: 241 TSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVL 300
Query: 220 RTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLD 279
+D + + + L + + D K V+ DG+I+ + EK ++
Sbjct: 301 LKYDVKTRK-VTEVKNNLTD------LRLSADRKTVMVRKDDGKIYTFPLEKPEDERTVE 353
Query: 280 AD 281
D
Sbjct: 354 TD 355
Score = 39.8 bits (91), Expect = 3e-04
Identities = 24/196 (12%), Positives = 43/196 (21%), Gaps = 4/196 (2%)
Query: 116 SPIDDTFISGSYDKTVRLWDLRSPNCQGIMHVSGSRPIAAFDPEG--LIFGVGVNSDTIK 173
SP+D I+ + D+ + R + + D +
Sbjct: 11 SPLDGDLIAFVSRGQAFIQDVSGTYVLKVPEPLRIRYV-RRGGDTKVAFIHGTREGDFLG 69
Query: 174 LYDVRS-FDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQT 232
+YD R+ + N D G I T
Sbjct: 70 IYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAM 129
Query: 233 LAGFLNNKGCPLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQFN 292
+ F + A P G IH+++ E + +
Sbjct: 130 ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDAD 189
Query: 293 PKFNMMASACTNLAFW 308
K S +
Sbjct: 190 SKNLYYLSYRSLDPSP 205
Score = 39.1 bits (89), Expect = 6e-04
Identities = 15/136 (11%), Positives = 28/136 (20%), Gaps = 11/136 (8%)
Query: 203 FS-ADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVISGSTD 261
FS DG I + G D L+ + D+K T
Sbjct: 10 FSPLDGDLIAFVSRGQA-FIQDVSGTYVLK-----VPEPLRIRYVRRGGDTKVAFIHGTR 63
Query: 262 G--RIHIWNAEKGFKVCVLDADHPSPVQTIQFNPKFNMMASACTNLAFWIPTYLSNHQEP 319
+ I++ G ++ V + + A +
Sbjct: 64 EGDFLGIYDYRTGK--AEKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTV 121
Query: 320 DTIDNLKIYLGVLCYQ 335
+
Sbjct: 122 IERSREAMITDFTISD 137
Score = 36.0 bits (81), Expect = 0.005
Identities = 11/211 (5%), Positives = 38/211 (18%), Gaps = 17/211 (8%)
Query: 105 GHTKKVNSLCLSPIDDTFISGSYD--KTVRLWDLRSPNCQ-----GIMHVSGSRPIAAFD 157
++ + + ++D R+ + +
Sbjct: 40 PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKF 99
Query: 158 PEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGS 217
+ + ++ ++ + +
Sbjct: 100 AVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQ 159
Query: 218 IIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCV 277
I +D + ++ F DSK + S +
Sbjct: 160 AIHVYDMEGRKIFAATTENSHDYAPA----FDADSKNLYYLSYRSLDPSPDRVVLNFSFE 215
Query: 278 LD------ADHPSPVQTIQFNPKFNMMASAC 302
+ P + P+ +
Sbjct: 216 VVSKPFVIPLIPGSPNPTKLVPRSMTSEAGE 246
Score = 35.2 bits (79), Expect = 0.008
Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Query: 5 DNVIRSYKVA-KLFRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTV 59
V+ Y V + E + +T + SAD ++ +D +I + E ++RTV
Sbjct: 297 KGVLLKYDVKTRKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDERTV 352
Score = 28.7 bits (62), Expect = 1.1
Identities = 9/65 (13%), Positives = 22/65 (33%), Gaps = 5/65 (7%)
Query: 246 ASFTP-DSKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQFNPKFNMMASACTN 304
F+P D + S G+ I + + + V P ++ ++ + T
Sbjct: 8 EDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLKVP---EPLRIRYVRRGGDTKVAFIHGTR 63
Query: 305 LAFWI 309
++
Sbjct: 64 EGDFL 68
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 64.5 bits (155), Expect = 2e-12
Identities = 32/269 (11%), Positives = 74/269 (27%), Gaps = 8/269 (2%)
Query: 8 IRSYKVAKLFRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVD 67
+ S +++ E++ + T S G S + I+D T+ +
Sbjct: 45 VGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGP 104
Query: 68 LIRFTHAKQAAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSY 127
+ + ++ A+ + + +
Sbjct: 105 VKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIIS 164
Query: 128 DKTVRLWDLRSPNCQGIMHVSG----SRPIAAFDPEGLIFGVGVNSDTIKLYDVRS--FD 181
+ G ++P+G +F TI LY+
Sbjct: 165 GSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKT 224
Query: 182 KGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKG 241
+ G+ +S DG I ++ I+ ++ + +T+ +
Sbjct: 225 GVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIED 284
Query: 242 CPLEASFTPDSKYVISGSTDGRIHIWNAE 270
L + ++S S +G I+ N E
Sbjct: 285 QQL--GIIWTKQALVSISANGFINFVNPE 311
Score = 61.1 bits (146), Expect = 3e-11
Identities = 33/294 (11%), Positives = 72/294 (24%), Gaps = 12/294 (4%)
Query: 23 KITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDLIRFTHAKQAAIHAS 82
+ + G + C+ + T+ + + + + +
Sbjct: 19 TAVVLGNTPAGDKIQYCN-GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGD 77
Query: 83 TKIDDTVRYLSLHDNKYI--RYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPN 140
VR +I P + V + + + R + +
Sbjct: 78 V--HGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAA-VGEGRERFGHVFLFD 134
Query: 141 CQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDWTG 200
+ A + V F+ PF E
Sbjct: 135 TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHS 194
Query: 201 IKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAG----FLNNKGCPLEASFTPDSKYVI 256
++++ DG + I ++ +G + + G +++PD +
Sbjct: 195 VRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIA 254
Query: 257 SGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQFNPKFNMMASACTN--LAFW 308
S S D I IWN + Q + + S N + F
Sbjct: 255 SASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 308
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 63.3 bits (152), Expect = 6e-12
Identities = 49/302 (16%), Positives = 100/302 (33%), Gaps = 30/302 (9%)
Query: 17 FRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDLIRFTHAKQ 76
E + + + Y D ++S D+ I I+D KR + V +++
Sbjct: 11 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVI 68
Query: 77 AAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDL 136
+ + + N I + L + ++ S D+++ +WD+
Sbjct: 69 ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVL------HLRFNNGMMVTCSKDRSIAVWDM 122
Query: 137 RSPNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSD--TIKLYDVRSFDKGPFSNFKFAAEK 194
SP + V A + + S TIK+++ + +
Sbjct: 123 ASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCE-------FVRTLN 175
Query: 195 ECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKY 254
+ ++ ++ + IR +D G CL+ L G L D+K
Sbjct: 176 GHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGH-----EELVRCIRFDNKR 230
Query: 255 VISGSTDGRIHIWNAEKGFKVCVLDAD--------HPSPVQTIQFNPKFNMMASACTNLA 306
++SG+ DG+I +W+ H V +QF+ + +S +
Sbjct: 231 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTIL 290
Query: 307 FW 308
W
Sbjct: 291 IW 292
Score = 54.9 bits (130), Expect = 4e-09
Identities = 35/214 (16%), Positives = 67/214 (31%), Gaps = 13/214 (6%)
Query: 95 HDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQGIMHVSGSRPIA 154
H + I +K V CL D +SG D T+++WD + C+ I+
Sbjct: 3 HSLQRIHCRSETSKGVY--CLQYDDQKIVSGLRDNTIKIWDKNTLECKRILT-------- 52
Query: 155 AFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILIST 214
L D + + + ++ +
Sbjct: 53 GHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCS 112
Query: 215 NGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVISGSTDGRIHIWNAEKGFK 274
I +D + + + ++ F D KY++S S D I +WN
Sbjct: 113 KDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEF 170
Query: 275 VCVLDADHPSPVQTIQFNPKFNMMASACTNLAFW 308
V L+ H + +Q+ + + S+ + W
Sbjct: 171 VRTLNG-HKRGIACLQYRDRLVVSGSSDNTIRLW 203
Score = 50.2 bits (118), Expect = 1e-07
Identities = 27/125 (21%), Positives = 47/125 (37%), Gaps = 7/125 (5%)
Query: 16 LFRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDLIRFTHAK 75
+ N K L++S S D+ I ++D E G R + + V IRF + +
Sbjct: 171 VRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFDNKR 230
Query: 76 QAAIHASTKI-----DDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKT 130
+ KI + + +R H+ +V L +S S+D T
Sbjct: 231 IVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDE--FQIVSSSHDDT 288
Query: 131 VRLWD 135
+ +WD
Sbjct: 289 ILIWD 293
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 61.4 bits (147), Expect = 4e-11
Identities = 43/354 (12%), Positives = 101/354 (28%), Gaps = 67/354 (18%)
Query: 21 TDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKR------TVFSKKYGVDLIRF--- 71
I S+ +SCS D + ++D +L N+ + F K G+ +
Sbjct: 14 DADIFSVSACNS--FTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQA 71
Query: 72 --THAKQAAIHASTKIDDTVRYLSLHDNKYIRYFPGHT----------KKVNSLCLSPID 119
A + + A+T + + + + +L +
Sbjct: 72 IERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 131
Query: 120 D-----TFISGSYDKTVRLWDLRSPNCQGIMHVSGSRPI-------------------AA 155
D ++ T +W + P
Sbjct: 132 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVD 191
Query: 156 FDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDW-TGIKFSADGKYILIST 214
GLI G N+ T+++ ++ + + + + +KFS G + I+
Sbjct: 192 ISERGLIA-TGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH 250
Query: 215 NGSIIRTFDAYNGQC-------------LQTLAGFLNNKGCPLEASFTPDSKYVISGSTD 261
+ + Y + Q G + + SF + + S D
Sbjct: 251 DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD 310
Query: 262 GRIHIWNAEKGFKVCVLDADHPSPVQ----TIQFNPKFNMMASACTNLAFWIPT 311
G++ W+ + ++ L+ H ++ + + + +A ++
Sbjct: 311 GKLRFWDVKTKERITTLNM-HCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKK 363
Score = 59.9 bits (143), Expect = 1e-10
Identities = 30/252 (11%), Positives = 76/252 (30%), Gaps = 47/252 (18%)
Query: 105 GHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQ--------------GIMHVSGS 150
H + S+ +S S D +++WD + + + G+ HV
Sbjct: 12 AHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVL 69
Query: 151 RPIAAFDPEGLIFGVGVNSDTIKLYDVRSFD-----KGPFSNFKFAAEKECDWTGIKFSA 205
+ I E + S + Y + D + + K+ + +K+ A
Sbjct: 70 QAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGA 129
Query: 206 DGKYILI------STNGSIIRTFDAYNGQCLQTLAG--------------FLNNKGCPLE 245
+L G+ +L +
Sbjct: 130 SNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATS 189
Query: 246 ASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLD-----ADHPSPVQTIQFNPKFNMMAS 300
+ + +G +G + I + + ++ + +++++F+P+ +++A
Sbjct: 190 VDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAI 248
Query: 301 ACTNLAFWIPTY 312
A + +F T
Sbjct: 249 AHDSNSFGCITL 260
Score = 50.6 bits (119), Expect = 1e-07
Identities = 31/192 (16%), Positives = 57/192 (29%), Gaps = 32/192 (16%)
Query: 17 FRENTDKITSIDYSADGLLLISCSEDDQIVIYD---CELGTNKRTVFSKKYGVDLIRFTH 73
+ TS+D S GL+ + + + I + N + S + IR
Sbjct: 180 PMTPSQFATSVDISERGLI-ATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVK 238
Query: 74 AKQAAIHASTKIDDTVRYL-----------------SLHDNKYIRYFPGHTKKVNSLCLS 116
+ D H ++ H+ V SL +
Sbjct: 239 FSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN 298
Query: 117 PIDDTFISGSYDKTVRLWDLRSPNCQGIMH-----VSGSRPIAAFDPEGLIFGVGVNSDT 171
+T S +D +R WD+++ ++ + I A D G
Sbjct: 299 DSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEP----- 353
Query: 172 IKLYDVRSFDKG 183
++DV+ KG
Sbjct: 354 -GVFDVKFLKKG 364
Score = 32.9 bits (73), Expect = 0.043
Identities = 17/128 (13%), Positives = 46/128 (35%), Gaps = 17/128 (13%)
Query: 9 RSYKVAKLFRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDL 68
S + + ++ + S+ ++ G L S D ++ +D + T+ +++
Sbjct: 277 HSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEI 336
Query: 69 IRFTHA--KQAAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGS 126
A + A + D V++L K S + ++++
Sbjct: 337 EEDILAVDEHGDSLAEPGVFD-VKFLK--------------KGWRSGMGADLNESLCCVC 381
Query: 127 YDKTVRLW 134
D+++R +
Sbjct: 382 LDRSIRWF 389
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 59.5 bits (142), Expect = 1e-10
Identities = 33/271 (12%), Positives = 70/271 (25%), Gaps = 14/271 (5%)
Query: 12 KVAKLFRENTDKITSIDYS--ADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYG---- 65
V + + +T++ +S L S E +++++ +V
Sbjct: 54 PVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQV 113
Query: 66 ----VDLIRFTHAKQAAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDT 121
+ I + + D+ ++S + GH++++N+ L
Sbjct: 114 LAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPM 173
Query: 122 FISGSYDKTVR----LWDLRSPNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDV 177
D + H GS V K+
Sbjct: 174 RSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCF 233
Query: 178 RSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFL 237
+ E D + + IR +D +C+Q
Sbjct: 234 DGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDK 293
Query: 238 NNKGCPLEASFTPDSKYVISGSTDGRIHIWN 268
G + +IS S DG ++ +
Sbjct: 294 QQLGNQQVGVVATGNGRIISLSLDGTLNFYE 324
Score = 54.2 bits (128), Expect = 6e-09
Identities = 36/288 (12%), Positives = 76/288 (26%), Gaps = 18/288 (6%)
Query: 23 KITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYG-----VDLIRFTHAKQA 77
T + Y + + + G +K + G V ++F+ K +
Sbjct: 19 FTTHLSYDPTTNAIAYPCGKS-AFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGS 77
Query: 78 AIHASTKIDDTVRYLSLHDNKYIRYF--------PGHTKKVNSLCLSPIDDTFISGSY-- 127
S V +K ++ +
Sbjct: 78 QYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGR 137
Query: 128 DKTVRLWDLRSPNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSN 187
D S N G + R A + D + + ++
Sbjct: 138 DNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSAS 197
Query: 188 FKFAAEKECDWTGIKFSAD-GKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEA 246
+ ++ ++FS D G++++ + I FD +G+ L+ + + A
Sbjct: 198 DRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFA 257
Query: 247 SFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDAD-HPSPVQTIQFNP 293
DS+ + D I +W+ V D Q +
Sbjct: 258 LSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVA 305
Score = 44.9 bits (104), Expect = 7e-06
Identities = 11/59 (18%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
Query: 81 ASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLS---PIDDTFISGSYDKTVRLWDL 136
A+ D T+R + +K ++ + +++ + + + IS S D T+ ++L
Sbjct: 267 ATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYEL 325
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 58.7 bits (140), Expect = 2e-10
Identities = 34/298 (11%), Positives = 81/298 (27%), Gaps = 62/298 (20%)
Query: 22 DKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDLIRFTHAKQAAIHA 81
+ I+ ++ D + C + ++ IY+ +
Sbjct: 8 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQ------------------------ 43
Query: 82 STKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNC 141
+ H +V + +P + ++ D+ +W L+
Sbjct: 44 ------------------VHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW 85
Query: 142 QGIMHVS---GSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDW 198
+ + + + + P F VG S I + + +
Sbjct: 86 KPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVL 145
Query: 199 TGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAG---------------FLNNKGCP 243
+ S + R F AY + + A ++ G
Sbjct: 146 SLDWHPNSVLLAAGSCDFK-CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV 204
Query: 244 LEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQFNPKFNMMASA 301
F+ + V S D + + +A+K A P+ + F + +++A+
Sbjct: 205 HGVCFSANGSRVAWVSHDSTVCLADADK-KMAVATLASETLPLLAVTFITESSLVAAG 261
Score = 57.6 bits (137), Expect = 5e-10
Identities = 37/303 (12%), Positives = 77/303 (25%), Gaps = 24/303 (7%)
Query: 9 RSYKVAKLFRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDL 68
+ +E+ ++T +D++ D +++C D ++ + T K T+ +
Sbjct: 39 NKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAA 98
Query: 69 IRFTHAKQAAIHASTKIDDTVRYLSLHDNK----YIRYFPGHTKKVNSLCLSPIDDTFIS 124
A A + V SL P +
Sbjct: 99 RCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAA 158
Query: 125 GSYDKTVRLWDLRSPNCQGIMHVSGSRPIAAF---DPEGLIFGVGVNSDTIKLYD----- 176
GS D R++ + + F E V+
Sbjct: 159 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAW 218
Query: 177 ------VRSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCL 230
V D A + + F + + + + F +
Sbjct: 219 VSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAGHDCFPVL-FTYDSAAGK 277
Query: 231 QTLAGFLNNKGCPLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQ 290
+ G L+ P ++S + + D + + LD+ H + V I
Sbjct: 278 LSFGGRLDV---PKQSSQRGLTARERFQNLDKKASSEGSAA--AGAGLDSLHKNSVSQIS 332
Query: 291 FNP 293
Sbjct: 333 VLS 335
Score = 51.0 bits (120), Expect = 8e-08
Identities = 15/127 (11%), Positives = 40/127 (31%), Gaps = 8/127 (6%)
Query: 17 FRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDLIRFTHAKQ 76
T + ++ + + L+ + D V++ + K + + +D+ + + +
Sbjct: 239 LASETLPLLAVTFITESSLVAAGH-DCFPVLFTYDSAAGKLSFGGR---LDVPKQSSQRG 294
Query: 77 AAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDT----FISGSYDKTVR 132
+ D H V+ + + F + D +
Sbjct: 295 LTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMS 354
Query: 133 LWDLRSP 139
+WD+RS
Sbjct: 355 IWDVRSL 361
Score = 46.8 bits (109), Expect = 2e-06
Identities = 17/210 (8%), Positives = 51/210 (24%), Gaps = 6/210 (2%)
Query: 102 YFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQGIMHVSG-SRPI--AAFDP 158
Y + ++ + + V +++ + + + + + P
Sbjct: 2 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAP 61
Query: 159 EGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSI 218
+ ++ ++ P S SI
Sbjct: 62 DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISI 121
Query: 219 IRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVISGSTDGRIHIWNAEKG-FKVCV 277
+ + + L + P+S + +GS D + I++A +
Sbjct: 122 CYFEQENDWWVCKH--IKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERP 179
Query: 278 LDADHPSPVQTIQFNPKFNMMASACTNLAF 307
S + + + + + F
Sbjct: 180 APTPWGSKMPFGELMFESSSSCGWVHGVCF 209
Score = 42.9 bits (99), Expect = 3e-05
Identities = 30/194 (15%), Positives = 56/194 (28%), Gaps = 15/194 (7%)
Query: 82 STKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNC 141
+ T + + + V+ +C S S+D TV L D
Sbjct: 176 EERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMA 235
Query: 142 -QGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDWTG 200
+ + F E + G + L+ S + K+ G
Sbjct: 236 VATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRG 294
Query: 201 IKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKY----VI 256
+ +A ++ + S + A G L +L +K + S K
Sbjct: 295 L--TARERFQNLDKKASSEGS--AAAGAGLDSL-----HKNSVSQISVLSGGKAKCSQFC 345
Query: 257 SGSTDGRIHIWNAE 270
+ DG + IW+
Sbjct: 346 TTGMDGGMSIWDVR 359
>gi|206564140|ref|YP_002234903.1|(51-382:385) putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|198040180|emb|CAR56163.1| putative amine
dehydrogenase [Burkholderia cenocepacia J2315]
gi|194561004|ref|YP_002096029.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|124876520|gb|EAY66510.1| hypothetical protein
BCPG_04901 [Burkholderia cenocepacia PC184]
gi|170737581|ref|YP_001778841.1| amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|169819769|gb|ACA94351.1| Amine dehydrogenase
[Burkholderia cenocepacia MC0-3]
gi|78061451|ref|YP_371359.1| amine dehydrogenase
[Burkholderia sp. 383] gi|77969336|gb|ABB10715.1|
Amine dehydrogenase [Burkholderia sp. 383]
gi|107025662|ref|YP_623173.1| amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116693156|ref|YP_838689.1| amine dehydrogenase
[Burkholderia cenocepacia HI2424]
gi|105895036|gb|ABF78200.1| Amine dehydrogenase
[Burkholderia cenocepacia AU 1054]
gi|116651156|gb|ABK11796.1| Amine dehydrogenase
[Burkholderia cenocepacia HI2424] E=8e-14 s/c=0.25
id=29% cov=82%
Length = 321
Score = 58.5 bits (140), Expect = 2e-10
Identities = 19/220 (8%), Positives = 43/220 (19%), Gaps = 33/220 (15%)
Query: 97 NKYIRYFPGHTKKVNSLCLSP----------IDDTFISGSYDKTVRLWDLRSPNCQGIMH 146
K + G ++P G+ V + D + + G +
Sbjct: 8 KKLLGQIDGG--FGPGFAIAPDRKASVVATTYFSRGSHGTRTDVVEIIDNTTLDHAGEIV 65
Query: 147 VSG----SRPIAAFDPE---GLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDW- 198
+ P G V + + + + E D
Sbjct: 66 IPAKHAQHVPSPYNTAFSADGKRLYVANITPAASVTVIDA--------VSKKMLSEIDTA 117
Query: 199 TGIKFSADGKYILI--STNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPD--SKY 254
+ G +G + NG+ + A
Sbjct: 118 ACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASRYKGD 177
Query: 255 VISGSTDGRIHIWNAEKGFKVCVLDAD-HPSPVQTIQFNP 293
+ + G + + + + P
Sbjct: 178 YLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRP 217
Score = 53.1 bits (126), Expect = 2e-08
Identities = 23/225 (10%), Positives = 50/225 (22%), Gaps = 35/225 (15%)
Query: 21 TDKITSIDYSADG-LLLISCSEDDQ-IVIYDCELGTNKRTVFSKKYGVDLIR---FTHAK 75
D + G + E + + + G + S + ++
Sbjct: 114 IDTAACVLAYPAGDDRFTALCESGKALTVTLDANGKEAKRTMSDAFIDVDKDPAFVNASR 173
Query: 76 QAAIHASTKIDDTVRYLSLHDNKY--IRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRL 133
+ T VR +K + + T + P + +
Sbjct: 174 YKGDYLFTTYGGNVRSADFSGDKPAFGKPWSLLTDAERAEGWRPGGMQQTAVQAKQNRYY 233
Query: 134 WDLRSPNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAE 193
+ G + DP ++ + S + +
Sbjct: 234 VLM-HKGTDG----------SHKDPGTQVWVYDLKSKQRVARWDLAQ------------Q 270
Query: 194 KECDWTGIKFSADGKYILISTN---GSIIRTFDAYNGQCLQTLAG 235
K I+ S D K + ++ DA G
Sbjct: 271 KVEPLVSIQVSEDDKPLFYGLTATSDLVV--MDARTGALQHVEKQ 313
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 57.7 bits (137), Expect = 4e-10
Identities = 40/293 (13%), Positives = 83/293 (28%), Gaps = 10/293 (3%)
Query: 12 KVAKLFRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSK-KYGVDLIR 70
+ ++ + IT++ SADG L S + I +D G + R + I+
Sbjct: 3 SIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIK 62
Query: 71 FTHAKQAAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKT 130
T + V + + + L +S D ++ Y
Sbjct: 63 TTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHI 122
Query: 131 VRLWDLRSPNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKF 190
+ + S A + G +
Sbjct: 123 AIYSHGKLTEVPISYNSS----CVALSNDKQFV----AVGGQDSKVHVYKLSGASVSEVK 174
Query: 191 AAEKECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTP 250
+ T + FS +G +++ + + + N L + + S++P
Sbjct: 175 TIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSP 234
Query: 251 DSKYVISGSTDGRIHIWNAEKGFKVCVL-DADHPSPVQTIQFNPKFNMMASAC 302
D+ + +GS D + +WN K ++ H + SA
Sbjct: 235 DNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAG 287
Score = 53.8 bits (127), Expect = 7e-09
Identities = 16/85 (18%), Positives = 30/85 (35%), Gaps = 3/85 (3%)
Query: 227 GQCLQTLAGFLNNKGCPLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPV 286
G Q G + S + D K + S +G I+ W+ G V H + +
Sbjct: 2 GSIDQVRYG---HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMI 58
Query: 287 QTIQFNPKFNMMASACTNLAFWIPT 311
I+ K ++ + + +P
Sbjct: 59 TGIKTTSKGDLFTVSWDDHLKVVPA 83
Score = 43.1 bits (99), Expect = 2e-05
Identities = 9/59 (15%), Positives = 24/59 (40%), Gaps = 2/59 (3%)
Query: 80 HASTKIDDTVRYLSLHDNK--YIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDL 136
A+ +D++V +++ I H + + + T +S D ++ W++
Sbjct: 239 LATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQDSNIKFWNV 297
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 55.6 bits (132), Expect = 3e-09
Identities = 24/224 (10%), Positives = 60/224 (26%), Gaps = 16/224 (7%)
Query: 120 DTFISGSYDKTVRLWDLRSPNCQGIMHV--SGSRPIA-AFDPEG-LIFGVGVNSDTIKLY 175
D ++ + + + D ++ + +G P+ P G + + S+++
Sbjct: 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKI 61
Query: 176 DVRSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQ---- 231
D+ + + + E+ G S DGK + I + +
Sbjct: 62 DLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYD 121
Query: 232 ----TLAGFLNNKGCPLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQ 287
+ ++ D + D + V D S
Sbjct: 122 AETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPE----AGTLVEDKPIQSWEA 177
Query: 288 TIQFNPKFNMMASACTNLAFWIPTYLSNHQEPDTIDNLKIYLGV 331
P + + + + + ++ D D G+
Sbjct: 178 ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGL 221
Score = 52.9 bits (125), Expect = 2e-08
Identities = 29/309 (9%), Positives = 72/309 (23%), Gaps = 51/309 (16%)
Query: 4 TDNVIRSYKVAKLFRENTDKITSIDYSADG-LLLISCSEDDQIVIYDCELGTNKRTV--- 59
V + +A + + G + + ++ + +V D G +
Sbjct: 20 KMAVDKVITIA----DAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLS 75
Query: 60 ---------FSKKYGVDLIRFTHAKQAAIHASTKIDDTVRYLSLHDNKY--IRYFPGHTK 108
F D + T + ++L+D + R +
Sbjct: 76 TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR 135
Query: 109 KVNSLCLSPIDDTFISGSYDKTVRLW----------------------DLRSPNCQGIMH 146
++ L + D V D+ + Q
Sbjct: 136 QITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESS 195
Query: 147 VSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDWTGIKFSAD 206
+ P + + D+ + + D + +
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETG------EMAMREVRIMDVFYFSTAVN 249
Query: 207 GKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVISGSTDGRIHI 266
+++ +FD ++ + + + D V G G +
Sbjct: 250 PAKTRAFGAYNVLESFDLEKNASIKRV----PLPHSYYSVNVSTDGSTVWLGGALGDLAA 305
Query: 267 WNAEKGFKV 275
++AE K
Sbjct: 306 YDAETLEKK 314
Score = 45.6 bits (106), Expect = 5e-06
Identities = 19/139 (13%), Positives = 40/139 (28%), Gaps = 4/139 (2%)
Query: 20 NTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDLIRFTHAKQAAI 79
D + ++ D E G +D+ F+ A A
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVR---IMDVFYFSTAVNPAK 252
Query: 80 HASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSP 139
+ + + L N I+ P S+ +S T G + +D +
Sbjct: 253 TRAFGAYNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311
Query: 140 NCQGIMHVSGSRPIAAFDP 158
+G + + G+ ++
Sbjct: 312 EKKGQVDLPGNASMSLASV 330
Score = 44.4 bits (103), Expect = 1e-05
Identities = 10/128 (7%), Positives = 27/128 (21%), Gaps = 6/128 (4%)
Query: 106 HTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQGIMHVSGSRPIAAFDPEGLIFGV 165
D +Y + DL + +
Sbjct: 196 GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRA 255
Query: 166 GVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRTFDAY 225
+ ++ +D+ + + S DG + + + +DA
Sbjct: 256 FGAYNVLESFDLEKN------ASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAE 309
Query: 226 NGQCLQTL 233
+ +
Sbjct: 310 TLEKKGQV 317
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 53.6 bits (127), Expect = 1e-08
Identities = 26/206 (12%), Positives = 56/206 (27%), Gaps = 9/206 (4%)
Query: 115 LSPIDDTFISGSYDKTVRLWDLRSPNCQGIMHV-SGSRPIA-AFDPEG-LIFGVGVNSDT 171
L + I +Y + + D+ S + P P+ + + +
Sbjct: 4 LKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGD 63
Query: 172 IKLYDVRSFDKGPFSNFKFAAEKECDW-TGIKFSADGKYILISTNGSIIRTFDAYNGQCL 230
I D+ + +N + S DGK + + N +
Sbjct: 64 IYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPR 123
Query: 231 QTLAGFLNNKGC-PLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTI 289
+ + P+ P Y++ + DG +++ + +D +
Sbjct: 124 LEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIY----KMDVKTGKYTVAL 179
Query: 290 QFNPKFNMMASACTNLAFWIPTYLSN 315
SA L FW +
Sbjct: 180 PLRNWNRKGYSAPDVLYFWPHQSPRH 205
Score = 53.6 bits (127), Expect = 1e-08
Identities = 31/333 (9%), Positives = 76/333 (22%), Gaps = 55/333 (16%)
Query: 4 TDNVIRSYKVAKLFRENTDKITSIDYSADG-LLLISCSEDDQIVIYDCELGTNKRTVFSK 62
+D V +S + + + + D + + I D + N
Sbjct: 27 SDTVYKSCVM-----PDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 81
Query: 63 KYGVDLIRFTH-----AKQAAIHASTKIDDTVRYLSLHDNKYIRYFPGHT---KKVNSLC 114
++ R + ++A+ + + + F K
Sbjct: 82 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF 141
Query: 115 LSPIDDTFISGSYDKTVRLWDLRSPNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKL 174
P + + D ++ + M V + A D +
Sbjct: 142 PMPRQVYLMRAADDGSL----YVAGPDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYF 197
Query: 175 YDVRSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILI---------------------- 212
+ +S + A K+ Y+ +
Sbjct: 198 WPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTG 257
Query: 213 ----------STNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVISGSTDG 262
+ + +D + ++ N +F + G T
Sbjct: 258 LRSPKDPNQIYGVLNRLAKYDLKQRKLIKAA----NLDHTYYCVAFDKKGDKLYLGGTFN 313
Query: 263 RIHIWNAEKGFKVCVLD-ADHPSPVQTIQFNPK 294
+ ++N + KV + T Q +
Sbjct: 314 DLAVFNPDTLEKVKNIKLPGGDMSTTTPQVFIR 346
Score = 53.2 bits (126), Expect = 1e-08
Identities = 13/131 (9%), Positives = 41/131 (31%), Gaps = 8/131 (6%)
Query: 200 GIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYV-ISG 258
G A +Y++++ + + D + ++ + +K P A PD++ +
Sbjct: 1 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCV--MPDKFGPGTAMMAPDNRTAYVLN 58
Query: 259 STDGRIHIWNAEKGFKVCVLD-----ADHPSPVQTIQFNPKFNMMASACTNLAFWIPTYL 313
+ G I+ + + + + + + +P + + Y+
Sbjct: 59 NHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYV 118
Query: 314 SNHQEPDTIDN 324
+
Sbjct: 119 VKPPRLEVFST 129
Score = 47.0 bits (110), Expect = 1e-06
Identities = 30/314 (9%), Positives = 76/314 (24%), Gaps = 45/314 (14%)
Query: 30 SADGLLLISCSEDDQIVIYDCELGTNKRTV-FSKKYGVDLIRFTHAKQAAIHASTKIDDT 88
A +I + + + + D T ++ K+G + A
Sbjct: 5 KAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAY-VLNNHYGD 63
Query: 89 VRYLSLHDNKYIRYFP------GHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQ 142
+ + L K + + + S +SP + +
Sbjct: 64 IYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPR 123
Query: 143 ---------------GIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYD----------- 176
+ + +G ++ G + + +
Sbjct: 124 LEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLYVAGPDIYKMDVKTGKYTVALPLRN 183
Query: 177 ------VRSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCL 230
+ + E +T +F D + + + D G+
Sbjct: 184 WNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTH 243
Query: 231 QTLAGFLNNKGCPLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQ 290
F + +P I G R+ ++ ++ + + DH +
Sbjct: 244 TQE--FADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLDH--TYYCVA 298
Query: 291 FNPKFNMMASACTN 304
F+ K + + T
Sbjct: 299 FDKKGDKLYLGGTF 312
Score = 40.1 bits (92), Expect = 3e-04
Identities = 15/154 (9%), Positives = 35/154 (22%), Gaps = 9/154 (5%)
Query: 155 AFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILIST 214
A V + + + DV S + + + + D + +
Sbjct: 3 ALKAGHEYMIVTNYPNNLHVVDVASDT--VYKSCVMPDKFGP--GTAMMAPDNRTAYVLN 58
Query: 215 NGS-IIRTFDAYNGQCLQTLAGFLNNKG---CPLEASFTPDSKYVISGSTDGRIHIWNAE 270
N I D + + +PD K V + + +
Sbjct: 59 NHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYV 118
Query: 271 KGFK-VCVLDADHPSPVQTIQFNPKFNMMASACT 303
+ V + ++ P +
Sbjct: 119 VKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRA 152
>d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 368
Score = 51.5 bits (122), Expect = 5e-08
Identities = 25/282 (8%), Positives = 57/282 (20%), Gaps = 46/282 (16%)
Query: 25 TSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTV-------FSKKYGVDLIRFTHAKQA 77
S D + ++D + FS V +I +
Sbjct: 78 DFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSAC 137
Query: 78 AIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLR 137
+ LS+ + + T GS ++ DL
Sbjct: 138 LLFFLFG-SSAAAGLSVPGASDDQLTKSASCFHIH---PGAAATHYLGSCPASLAASDLA 193
Query: 138 SPNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLY----DVRSFDKG--------PF 185
+ N + ++ + D
Sbjct: 194 AAP----AAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAI 249
Query: 186 SNFKFAAEKE----CDWTGIKFSADGKYILISTNGSI---------IRTFDAYNGQCLQT 232
+ + + + + + I+I T + A GQ
Sbjct: 250 DGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP 309
Query: 233 LAGFLNNKGCPLEASFTPDSKY--VISGSTDGRIHIWNAEKG 272
++ D + + + I++A
Sbjct: 310 ISN----GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347
Score = 42.3 bits (98), Expect = 6e-05
Identities = 18/231 (7%), Positives = 47/231 (20%), Gaps = 28/231 (12%)
Query: 26 SIDYSADG-LLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDLIRFTHAKQAAIHASTK 84
I A LL ++ + A + +
Sbjct: 128 IIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTK----SASCFHIHPGAAATHYLGSC 183
Query: 85 IDDTVRYLSLHDNKYIRY------FPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRS 138
++ L + + + +
Sbjct: 184 -PASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAG 242
Query: 139 PNCQGIM------------HVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFS 186
+ + +G + +A I + V L + S
Sbjct: 243 ATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTAS 302
Query: 187 NFKFAAEKECD--WTGIKFSADGKYILISTNG--SIIRTFDAYNGQCLQTL 233
+ + I + DG + + ++ +DA + Q ++
Sbjct: 303 VGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSV 353
Score = 37.3 bits (85), Expect = 0.002
Identities = 19/181 (10%), Positives = 32/181 (17%), Gaps = 19/181 (10%)
Query: 124 SGSYDKTVRLWDLRS---------PNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKL 174
G V ++D + P+ I + S
Sbjct: 91 KGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAG 150
Query: 175 YDV--RSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQT 232
V S D+ S F T S +
Sbjct: 151 LSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIV-------G 203
Query: 233 LAGFLNNKGCPLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQFN 292
A V + ++ A +D + S + F
Sbjct: 204 AQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDG-NESGRKADNFR 262
Query: 293 P 293
Sbjct: 263 S 263
Score = 36.9 bits (84), Expect = 0.002
Identities = 12/169 (7%), Positives = 40/169 (23%), Gaps = 23/169 (13%)
Query: 4 TDNVIRSYKVAKLFRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKK 63
A+ + + G+L+ + + T K + +
Sbjct: 194 AAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNE 253
Query: 64 YGVDLIRFTHAKQAAIHASTKIDDTVRYLSLHDNKYIRYFPGHT---------------- 107
G F A + + + ++
Sbjct: 254 SGRKADNFRSAGFQMVAKL--KNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS 311
Query: 108 --KKVNSLCLSPIDDT--FISGSYDKTVRLWDLRSPNCQGIMHVSGSRP 152
+++ + + + + + + + ++D S Q + + P
Sbjct: 312 NGHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVEL-DKGP 359
Score = 32.3 bits (72), Expect = 0.078
Identities = 12/125 (9%), Positives = 29/125 (23%), Gaps = 23/125 (18%)
Query: 200 GIKFSADGKYILIS-----TNGSIIRTFDAYNGQCLQTL-AGFLNNKGCPLEASFTPDSK 253
A + I+ + A G L FL+ A
Sbjct: 24 DHGPGAISRRSHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLSL------AVAGHSGS 77
Query: 254 YVI----------SGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQFNPKFNMMASACT 303
G + +++ + ++ +P ++ ++
Sbjct: 78 DFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIEL-PDAPRFSVGPRVHIIGNCASSA 136
Query: 304 NLAFW 308
L F+
Sbjct: 137 CLLFF 141
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 51.1 bits (120), Expect = 6e-08
Identities = 13/57 (22%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Query: 80 HASTKIDDTVRYLSLHDN-KYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWD 135
A+ +D + S+ K I+ H VN+L T +S D ++ W+
Sbjct: 230 VATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWET-PSTLVSSGADACIKRWN 285
Score = 48.8 bits (114), Expect = 3e-07
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 4/43 (9%)
Query: 96 DNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRS 138
++ ++ GH K + +L ++P+ ISGSYD + W S
Sbjct: 2 HDEVLKTISGHNKGITALTVNPL----ISGSYDGRIMEWSSSS 40
Score = 47.6 bits (111), Expect = 7e-07
Identities = 38/290 (13%), Positives = 85/290 (29%), Gaps = 18/290 (6%)
Query: 12 KVAKLFRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDLIRF 71
+V K + IT++ + LIS S D +I+ + + + +
Sbjct: 4 EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQDHS-----NLIVSLDN 54
Query: 72 THAKQAAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTV 131
+ A++ + + + + ++ + D + +
Sbjct: 55 SKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDII 114
Query: 132 RLWDLRSPNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFA 191
+ L SP + +A EG V SD +D+++ + S +
Sbjct: 115 KSVRLNSPGSAVSLS---QNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISIS 171
Query: 192 AEKECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPD 251
+ G Y L S R + + +
Sbjct: 172 PSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAIS-----WKPAEKGANEEEIE 226
Query: 252 SKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQFNPKFNMMASA 301
V +GS D I I++ ++ K+ H V + + + + S+
Sbjct: 227 EDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETP-STLVSS 275
Score = 39.2 bits (89), Expect = 4e-04
Identities = 10/85 (11%), Positives = 28/85 (32%), Gaps = 3/85 (3%)
Query: 95 HDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQGIMHVSGSRPI- 153
I + + +D +GS D + ++ ++ P + +
Sbjct: 203 FRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVN 262
Query: 154 -AAFDPEGLIFGVGVNSDTIKLYDV 177
++ + G ++ IK ++V
Sbjct: 263 NLLWETPSTLVSSGADA-CIKRWNV 286
Score = 37.6 bits (85), Expect = 0.001
Identities = 30/265 (11%), Positives = 73/265 (27%), Gaps = 10/265 (3%)
Query: 5 DNVIRSYKVAKLFRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKY 64
D I + + + +++++ I S+D S +D V + + +
Sbjct: 30 DGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASAN 89
Query: 65 GVDLIRFTHAKQAAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFIS 124
+ + D ++ + L+ + +T
Sbjct: 90 NDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYV----AVGLEEGNTIQV 145
Query: 125 GSYDKTVRLWDLRSPNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGP 184
+DL++P ++S S + G + D S
Sbjct: 146 FKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGD-VMGKILLYDLQSREVKTSRWAFR 204
Query: 185 FSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRTFDAYN-GQCLQTLAGFLNNKGCP 243
S + K + + + + + + I + + ++ L +K
Sbjct: 205 TSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNA---HKDGV 261
Query: 244 LEASFTPDSKYVISGSTDGRIHIWN 268
+ S ++S D I WN
Sbjct: 262 NNLLWETPST-LVSSGADACIKRWN 285
Score = 37.2 bits (84), Expect = 0.002
Identities = 15/92 (16%), Positives = 34/92 (36%), Gaps = 13/92 (14%)
Query: 226 NGQCLQTLAGFLNNKGCPLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSP 285
+ + L+T++G + + P +ISGS DGRI W++ + DH +
Sbjct: 2 HDEVLKTISG---HNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ------DHSNL 48
Query: 286 VQTIQFNPKFNMMASACTNLAFWIPTYLSNHQ 317
+ ++ + + + +
Sbjct: 49 IVSLDNSKAQEYSSISWDDTLKVNGITKHEFG 80
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 49.9 bits (117), Expect = 2e-07
Identities = 23/132 (17%), Positives = 46/132 (34%), Gaps = 6/132 (4%)
Query: 103 FPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQGIMHVSGSRPIA-AFDPEGL 161
GH V + CL D+ I+G+ DK +R++D + + A + G+
Sbjct: 8 LRGHMTSVIT-CLQFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGI 66
Query: 162 IFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRT 221
+ V+ T + V KG ++ I + KYI+ + + +
Sbjct: 67 L----VSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHV 122
Query: 222 FDAYNGQCLQTL 233
+ +
Sbjct: 123 WKLPKESSVPDH 134
Score = 49.5 bits (116), Expect = 2e-07
Identities = 31/307 (10%), Positives = 74/307 (24%), Gaps = 12/307 (3%)
Query: 8 IRSYKVAKLFRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVD 67
+ K + + ++ Y+ G+L +S S D + ++D + G V
Sbjct: 40 SINKKFLLQLSGHDGGVWALKYAHGGIL-VSGSTDRTVRVWDIKKGCCTHVFEGHNSTVR 98
Query: 68 LIRFTHAKQAAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSY 127
+ K + D+T+ L + + F+
Sbjct: 99 CLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR 158
Query: 128 DKTVRLWDLRSPNCQ----------GIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDV 177
+ + + V+ + + + K
Sbjct: 159 GHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCIS 218
Query: 178 RSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFL 237
S D E G + S F
Sbjct: 219 ASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSRKFS 278
Query: 238 NNKGCPLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQFNPKFNM 297
+ + S ++ ++ + +I+N G V + ++ F K +
Sbjct: 279 YHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFKGK-TL 337
Query: 298 MASACTN 304
+A+ +
Sbjct: 338 VAAVEKD 344
Score = 48.0 bits (112), Expect = 7e-07
Identities = 24/139 (17%), Positives = 46/139 (33%), Gaps = 1/139 (0%)
Query: 30 SADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDLIRFTHAKQAAIHASTKIDDTV 89
+ +I+ ++D I +YD + GV +++ H ST V
Sbjct: 20 QFEDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVS-GSTDRTVRV 78
Query: 90 RYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQGIMHVSG 149
+ ++ T + + ++GS D T+ +W L +
Sbjct: 79 WDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEH 138
Query: 150 SRPIAAFDPEGLIFGVGVN 168
P+ PE + VGV
Sbjct: 139 DYPLVFHTPEENPYFVGVL 157
Score = 44.1 bits (102), Expect = 1e-05
Identities = 14/84 (16%), Positives = 28/84 (33%), Gaps = 3/84 (3%)
Query: 95 HDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQGIMHVSGSRPI- 153
N Y R F H ++++ + D + + +++LRS + + I
Sbjct: 269 DANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIW 328
Query: 154 -AAFDPEGLIFGVGVNSDTIKLYD 176
F + L+ V L
Sbjct: 329 SVNFKGKTLVAAVE-KDGQSFLEI 351
Score = 41.4 bits (95), Expect = 8e-05
Identities = 29/189 (15%), Positives = 59/189 (31%), Gaps = 11/189 (5%)
Query: 79 IHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRS 138
I S D+T+ + K + GHT ++ S IS S D T+R+WDL +
Sbjct: 173 IVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLEN 232
Query: 139 PNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDW 198
+ + + + D + + +
Sbjct: 233 GELMYTLQGHTALVGLLRLSDKFLVSAA--------ADGSIRGWDANDYSRKFSYHHTNL 284
Query: 199 TGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVISG 258
+ I IL+S + + ++ +G+ + L + +F V +
Sbjct: 285 SAITTFYVSDNILVSGSENQFNIYNLRSGKLVHAN--ILKDADQIWSVNFKGK-TLVAAV 341
Query: 259 STDGRIHIW 267
DG+ +
Sbjct: 342 EKDGQSFLE 350
Score = 39.5 bits (90), Expect = 4e-04
Identities = 6/52 (11%), Positives = 14/52 (26%), Gaps = 2/52 (3%)
Query: 86 DDTVRYLSLHDNKYIR-YFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDL 136
++ +L K + ++ S+ + D L L
Sbjct: 302 ENQFNIYNLRSGKLVHANILKDADQIWSVNFKG-KTLVAAVEKDGQSFLEIL 352
>d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Paracoccus
denitrificans [TaxId: 266]}
Length = 432
Score = 47.1 bits (111), Expect = 1e-06
Identities = 26/226 (11%), Positives = 54/226 (23%), Gaps = 18/226 (7%)
Query: 86 DDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQGIM 145
+ + + V+ LS D V + DL +
Sbjct: 41 AGQIALIDGSTYEIKTVLDTG-YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA 99
Query: 146 HV---SGSRPIA---AFDPEG-LIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKEC-- 196
+ S +R I E + D + + + + E
Sbjct: 100 EIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEY 159
Query: 197 ----DWTGIKFSADGKYILISTNGS-IIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPD 251
I S +++ + I D + L+T ++ + +
Sbjct: 160 HPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTE--ISAERFLHDGGLDGS 217
Query: 252 SKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQFNPKFNM 297
+Y I+ + + K K+ V D F
Sbjct: 218 HRYFITAANARNKLVVIDTKEGKL-VAIEDTGGQTPHPGRGANFVH 262
Score = 42.1 bits (98), Expect = 6e-05
Identities = 37/317 (11%), Positives = 74/317 (23%), Gaps = 54/317 (17%)
Query: 26 SIDYSADGLLLISCSEDDQIVIYDCELGTNKRT----VFSKKYGVDLIRFTHAKQAAIHA 81
SA G L D ++ + D + + S+ ++ + + A
Sbjct: 66 ISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIA 125
Query: 82 STKIDDTVRYLSLHDNKYIRYFP-----------GHTKKVNSLCLSPIDDTFI-SGSYDK 129
+ + + +V ++ S FI +
Sbjct: 126 GAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETG 185
Query: 130 TVRLWDLRSPNCQGI-MHVSGSRP-IAAFDPEGLIFGVGVNSDTIKLYDVRSFDK----- 182
+ L D N + D F N+ + K
Sbjct: 186 KILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIE 245
Query: 183 ---------GPFSNFKFAAEKECDWTG------IKFSADGKYILISTNGSIIRTFDAYNG 227
G +NF T + I+ +F A G
Sbjct: 246 DTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGG 305
Query: 228 QCLQTLAGFLNNKGCPLEASFTP-----------DSKYVISGSTDGRIHIWNAEKGFKVC 276
L + N++ ++A+ P D K + +D + +
Sbjct: 306 GSL-FIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGI- 363
Query: 277 VLDADHPSPVQTIQFNP 293
+ V +FN
Sbjct: 364 ---TEGQPRVVQGEFNK 377
Score = 32.8 bits (74), Expect = 0.049
Identities = 13/94 (13%), Positives = 26/94 (27%), Gaps = 15/94 (15%)
Query: 199 TGIKFSADGKYILISTN--GSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVI 256
T D + + T I D + L + + +Y+
Sbjct: 22 TQQMNDWDLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYA----VHISRLSASGRYLF 77
Query: 257 SGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQ 290
DG++++ L P+ V I+
Sbjct: 78 VIGRDGKVNMI---------DLWMKEPTTVAEIK 102
Score = 28.2 bits (62), Expect = 1.6
Identities = 21/164 (12%), Positives = 42/164 (25%), Gaps = 34/164 (20%)
Query: 101 RYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQGIMHVSGSRPIAAFDPEG 160
P + K+ + + ++ + L+ + N S +A FD
Sbjct: 287 EGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLN----PEAEISGSVAVFD--I 340
Query: 161 LIFGVGVNSDTIKLYDV---RSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILIS---- 213
+ K + +G + F+ DG + S
Sbjct: 341 KAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGE-----------FNKDGTEVWFSVWNG 389
Query: 214 -TNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVI 256
S + D + + K L TP K+ +
Sbjct: 390 KDQESALVVVDDKTLELKHVI------KDERL---VTPTGKFNV 424
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 45.9 bits (107), Expect = 3e-06
Identities = 26/179 (14%), Positives = 50/179 (27%), Gaps = 24/179 (13%)
Query: 5 DNVIRSYKVAKLFRENTDKITSIDYSADGLLLISCSEDDQIVIYDCELGT----NKRTVF 60
+ E+ I YS L+ + +I D G
Sbjct: 178 EGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEAL 237
Query: 61 SKKYGVDLIRFTHAKQAAIHASTKI----------------DDTVRYLSLHDNKYIRYFP 104
++ D R +Q A H + V L + + F
Sbjct: 238 TEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFE 297
Query: 105 GHTKKVNSLCLSPIDDT--FISGSYDKTVRLWDLRSPNCQGIMHVSGSRP-IAAFDPEG 160
+++S+ +S + + + DKT+ + D S ++ G P + G
Sbjct: 298 MG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTADMG 355
Score = 44.8 bits (104), Expect = 7e-06
Identities = 27/238 (11%), Positives = 57/238 (23%), Gaps = 28/238 (11%)
Query: 81 ASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSP----------IDDTFISGSYDKT 130
A + + I G + + ++ + G
Sbjct: 22 AHFAAVTQQFVIDGEAGRVIGMIDGG--FLPNPVVADDGSFIAHASTVFSRIARGERTDY 79
Query: 131 VRLWDLRSPNCQG-IMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFK 189
V ++D + I R + P + K F P
Sbjct: 80 VEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSL-----TPDGKTLLFYQFSPAPAVGVV 134
Query: 190 FAAEKEC-------DWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGC 242
K D I +A + + +GS+ + G T + +
Sbjct: 135 DLEGKAFKRMLDVPDCYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDE 194
Query: 243 PL--EASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQFNPKFNMM 298
L +++ + ++ + G+IH + G L A +
Sbjct: 195 FLINHPAYSQKAGRLVWPTYTGKIHQIDLSSG-DAKFLPAVEALTEAERADGWRPGGW 251
Score = 41.7 bits (96), Expect = 8e-05
Identities = 30/236 (12%), Positives = 59/236 (25%), Gaps = 28/236 (11%)
Query: 25 TSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDLIRFTHAKQAAIHASTK 84
+ DG L+ + +L I F A
Sbjct: 109 WMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHI-FPTAPDTFFMHCR- 166
Query: 85 IDDTVRYLSLHDNKYIR------YFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRS 138
D ++ ++ + P +N S + +Y + DL S
Sbjct: 167 -DGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSS 225
Query: 139 PNCQGIMHVSG--SRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKEC 196
+ + + V A G V + ++Y +
Sbjct: 226 GDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVL 285
Query: 197 DW---------------TGIKFSADGKYILISTNGS--IIRTFDAYNGQCLQTLAG 235
D I S D K +L + + + DA +G+ L+++
Sbjct: 286 DAKTGERLAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQ 341
>d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of
cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa
[TaxId: 287]}
Length = 426
Score = 43.4 bits (101), Expect = 3e-05
Identities = 32/309 (10%), Positives = 79/309 (25%), Gaps = 44/309 (14%)
Query: 26 SIDYSADGLLLISCSEDDQIVIYDCELGTNKRT----VFSKKYGVDLIRFTHAKQAAIHA 81
SA G L+ D +I + D + + + V+ +F + A
Sbjct: 66 ISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIA 125
Query: 82 STKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDT-FISGSYDKTVRLWDLRSPN 140
+ + + V++ P I S++ + +++
Sbjct: 126 GAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETG 185
Query: 141 CQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKEC---- 196
+++ + F D+ Y + + + + ++
Sbjct: 186 KVLLVNYKDIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALV 245
Query: 197 -------DWTGIKFSADGKYI----------LISTNGSIIRTFDAYNGQCLQTLAGFLNN 239
G F IS G+ + Y + + L G
Sbjct: 246 DVGKTPHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQG---Q 302
Query: 240 KGCPLEASFTPDSKYVI-------SGSTDGRIHIWNA---EKGFKV-----CVLDADHPS 284
G L P S ++ + +++ + ++V +
Sbjct: 303 GGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAK 362
Query: 285 PVQTIQFNP 293
V ++N
Sbjct: 363 RVVQPEYNK 371
Score = 43.4 bits (101), Expect = 3e-05
Identities = 18/167 (10%), Positives = 41/167 (24%)
Query: 122 FISGSYDKTVRLWDLRSPNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFD 181
++ + L D S ++ + I+ G V I + D+ + +
Sbjct: 35 SVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGRDARIDMIDLWAKE 94
Query: 182 KGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKG 241
+ K E + + +Y + + +
Sbjct: 95 PTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTV 154
Query: 242 CPLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQT 288
P +I+ + E G + V D + T
Sbjct: 155 DTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVT 201
Score = 38.0 bits (87), Expect = 0.001
Identities = 9/100 (9%), Positives = 28/100 (28%), Gaps = 6/100 (6%)
Query: 199 TGIKFSADGKYILISTN--GSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVI 256
D + T I D + + ++ + + + +Y++
Sbjct: 22 KKQLNDLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA----VHISRMSASGRYLL 77
Query: 257 SGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQFNPKFN 296
D RI + + V + ++++ +
Sbjct: 78 VIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKG 117
Score = 36.5 bits (83), Expect = 0.004
Identities = 27/245 (11%), Positives = 61/245 (24%), Gaps = 15/245 (6%)
Query: 86 DDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPNCQG-- 143
+ + K ++ V+ +S + D + + DL +
Sbjct: 41 AGQIALVDGDSKKIVKVIDTG-YAVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVA 99
Query: 144 -IMHVSGSRPIA---AFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDWT 199
I +R + E G D + + +
Sbjct: 100 EIKIGIEARSVESSKFKGYEDRYTIAGAYWP----PQFAIMDGETLEPKQIVSTRGMTVD 155
Query: 200 GIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVISGS 259
+ + + I S N + + L + + ++ G
Sbjct: 156 TQTYHPEPRVAAII--ASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLADGG 213
Query: 260 TD--GRIHIWNAEKGFKVCVLDADHPSPVQTIQFNPKFNMMASACTNLAFWIPTYLSNHQ 317
D R + A KV V+D+ + + A + P + ++H
Sbjct: 214 WDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHL 273
Query: 318 EPDTI 322
+I
Sbjct: 274 GDGSI 278
Score = 31.5 bits (70), Expect = 0.13
Identities = 33/250 (13%), Positives = 71/250 (28%), Gaps = 33/250 (13%)
Query: 21 TDKITSIDYSADGLLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVDLIRFTHAKQAAIH 80
T K+ ++Y D L S + D ++ R + + + +K +
Sbjct: 184 TGKVLLVNYK-DIDNLTVTSIGAAPFLADGGWDSSHRYFMTAANNSNKVAVIDSKDRRLS 242
Query: 81 ASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLRSPN 140
A + T H + + V S + G+ K + +
Sbjct: 243 ALVDVGKTP-----HPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWK--K 295
Query: 141 CQGIMHVSGSRPIAAFDPEGLIFGV-------GVNSDTIKLYDVRSFDKG----PFSNFK 189
+ G P+ V S ++ ++D+++ D P + +
Sbjct: 296 VAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWA 355
Query: 190 FAAEKECDWTGIKFSADGKYILIS-----TNGSIIRTFDAYNGQCLQTLAGFLNNKGCPL 244
E +++ G + S + S + D + + K L
Sbjct: 356 DLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVV------KDPRL 409
Query: 245 EASFTPDSKY 254
TP K+
Sbjct: 410 ---ITPTGKF 416
>d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon
Methanosarcina mazei [TaxId: 2209]}
Length = 301
Score = 40.2 bits (92), Expect = 2e-04
Identities = 12/79 (15%), Positives = 30/79 (37%), Gaps = 3/79 (3%)
Query: 122 FISGSYDKTVRLWDLRSPNCQGIMHVSGSRPIA-AFDPEG-LIFGVGVNSDTIKLYDVRS 179
+I+ S + + D+ S + V GS P+ P+G ++ +S+ + + D +
Sbjct: 5 YIANSESDNISVIDVTSNKVTATIPV-GSNPMGAVISPDGTKVYVANAHSNDVSIIDTAT 63
Query: 180 FDKGPFSNFKFAAEKECDW 198
+ + +
Sbjct: 64 NNVIATVPAGSSPQGVAVS 82
Score = 38.7 bits (88), Expect = 7e-04
Identities = 29/271 (10%), Positives = 63/271 (23%), Gaps = 17/271 (6%)
Query: 4 TDNVIRSYKVAKLFRENTDKITSIDYSADG-LLLISCSEDDQIVIYDCELGTNKRTVFSK 62
++ V + V S DG + ++ + + + I D TN
Sbjct: 21 SNKVTATIPVG-------SNPMGAVISPDGTKVYVANAHSNDVSIID--TATNNVIATVP 71
Query: 63 KYGVDLIRFTHAKQAAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTF 122
++ + T+ + N K L LSP
Sbjct: 72 AGSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTV-KTGKSPLGLALSPDGKKL 130
Query: 123 ISGSYDKTVRLWDLRSPNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDK 182
+ G P N D++ + + +
Sbjct: 131 YVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN 190
Query: 183 GPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGC 242
K A + + + ++ + + +
Sbjct: 191 SVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTG-TNKITARIPVGPD---- 245
Query: 243 PLEASFTPDSKYV-ISGSTDGRIHIWNAEKG 272
P + TPD K V ++ S + + +
Sbjct: 246 PAGIAVTPDGKKVYVALSFCNTVSVIDTATN 276
Score = 36.4 bits (82), Expect = 0.004
Identities = 16/76 (21%), Positives = 27/76 (35%), Gaps = 3/76 (3%)
Query: 80 HASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDT-FISGSYDKTVRLWDLRS 138
K +TV + NK P + ++P +++ S+ TV + D +
Sbjct: 217 TNVDKYFNTVSMIDTGTNKITARIPVG-PDPAGIAVTPDGKKVYVALSFCNTVSVIDTAT 275
Query: 139 PNCQGIMHVSGSRPIA 154
M V G P A
Sbjct: 276 NTITATMAV-GKNPYA 290
Score = 34.1 bits (76), Expect = 0.018
Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 1/39 (2%)
Query: 197 DWTGIKFSADGKYILISTNGS-IIRTFDAYNGQCLQTLA 234
D GI + DGK + ++ + + D T+A
Sbjct: 245 DPAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATMA 283
Score = 29.5 bits (64), Expect = 0.52
Identities = 7/37 (18%), Positives = 15/37 (40%), Gaps = 1/37 (2%)
Query: 24 ITSIDYSADG-LLLISCSEDDQIVIYDCELGTNKRTV 59
I + DG + ++ S + + + D T T+
Sbjct: 246 PAGIAVTPDGKKVYVALSFCNTVSVIDTATNTITATM 282
>d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli
[TaxId: 562]}
Length = 333
Score = 39.4 bits (90), Expect = 4e-04
Identities = 30/271 (11%), Positives = 65/271 (23%), Gaps = 21/271 (7%)
Query: 19 ENTDKITSIDYSADG-LLLISCSEDDQIVIYDCELGTNKRTVFSKKYGVD---LIRFTHA 74
+ ++ + S D L + + +++ Y T ++ I H
Sbjct: 34 DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQ 93
Query: 75 KQAAIHASTKIDDTVRYLSLHDNKYIRY-FPGHTKKVNSLCLSPIDDTFISGSYD-KTVR 132
Q S + +S +SP + T + +
Sbjct: 94 GQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRIC 153
Query: 133 LWDLRSPNCQGIMHVSGSRPIAAFDPEGLIF----------GVGVNSDTIKLYDVRSFDK 182
L+ + + + P ++F +S + +
Sbjct: 154 LFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNI 213
Query: 183 GPFSNFKFAAEKECDWTGIKFSA----DGKYILISTNGSIIRTFDAYNGQCLQTLAGFLN 238
E D S+I F + + GF
Sbjct: 214 ECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQP 273
Query: 239 NKGCPLEASFTPDSKYVI-SGSTDGRIHIWN 268
+ P + KY+I +G I ++
Sbjct: 274 TETQPRGFNVDHSGKYLIAAGQKSHHISVYE 304
Score = 36.7 bits (83), Expect = 0.003
Identities = 15/172 (8%), Positives = 45/172 (26%), Gaps = 8/172 (4%)
Query: 122 FISGSYDKTVRLWDLRSPNC----QGIMHVSGSRPIAAFDPEG-LIFGVGVNSDTIKLYD 176
+I+ + + +W+L Q + +P+ P+ ++ + Y
Sbjct: 7 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPM-VVSPDKRYLYVGVRPEFRVLAYR 65
Query: 177 VRSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGF 236
+ F + T I G+++ + + + + +
Sbjct: 66 IAP--DDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDV 123
Query: 237 LNNKGCPLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQT 288
+ A+ +PD++ + + V
Sbjct: 124 VEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVE 175
>d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein
6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 465
Score = 37.6 bits (86), Expect = 0.002
Identities = 19/142 (13%), Positives = 43/142 (30%), Gaps = 12/142 (8%)
Query: 201 IKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVISG-- 258
K+ +D ++I G++ ++ + G + +PD +Y +
Sbjct: 22 AKWISDTEFIYREQKGTVRL-WNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYN 80
Query: 259 -------STDGRIHIWNAEKGFKVCVLDAD-HPSPVQTIQFNPKFNMMASACTNLAFWIP 310
S G + G + + + +Q + PK + N ++
Sbjct: 81 VEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCA 140
Query: 311 TYLSN-HQEPDTIDNLKIYLGV 331
+ T IY G+
Sbjct: 141 HVGKQAIRVVSTGKEGVIYNGL 162
Score = 29.6 bits (65), Expect = 0.62
Identities = 16/115 (13%), Positives = 34/115 (29%), Gaps = 14/115 (12%)
Query: 168 NSDTIKLYDVRSFDKGP-FSNFKFAAEKECDWTGIKFSADGKYILISTN---------GS 217
T++L++V + K + + + S D +Y L S N
Sbjct: 35 QKGTVRLWNVETNTSTVLIEGKKIESLRAIRYE---ISPDREYALFSYNVEPIYQHSYTG 91
Query: 218 IIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVISGSTDGRIHIWNAEKG 272
+G ++N A + P + +I + + + K
Sbjct: 92 YYVLSKIPHGDPQSLDPPEVSNAKL-QYAGWGPKGQQLIFIFENNIYYCAHVGKQ 145
Score = 26.9 bits (58), Expect = 3.9
Identities = 13/87 (14%), Positives = 28/87 (32%), Gaps = 6/87 (6%)
Query: 153 IAAFDPEG--LIF-GVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDWTGIKFSADGKY 209
I A+D +G + F +LY + + C + FS +
Sbjct: 364 ILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDF 423
Query: 210 ILISTNGS---IIRTFDAYNGQCLQTL 233
L+ G ++ + + + + L
Sbjct: 424 FLLKCEGPGVPMVTVHNTTDKKKMFDL 450
Score = 25.7 bits (55), Expect = 9.0
Identities = 13/64 (20%), Positives = 21/64 (32%), Gaps = 6/64 (9%)
Query: 219 IRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVI---SGSTDGRIHIWNAEKGFKV 275
T +N QCL L ASF+ + + G + + N K+
Sbjct: 391 ANTVGNFNRQCLSCD---LVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVHNTTDKKKM 447
Query: 276 CVLD 279
L+
Sbjct: 448 FDLE 451
>d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal
domain {Pseudomonas nautica [TaxId: 2743]}
Length = 441
Score = 36.8 bits (85), Expect = 0.003
Identities = 29/221 (13%), Positives = 53/221 (23%), Gaps = 28/221 (12%)
Query: 84 KIDDTVRYLSLHDNKYIRYFP-GHTKKV-----NSLCLSPIDDTFISGSYDKTVRLWDLR 137
K D ++ +R T V + F + D
Sbjct: 105 KTDKITHIPNVQAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAE 164
Query: 138 SPNCQGIMHVSGSRPIAAFDPEG-LIFGVGVNSDTIKLYDVRSF---DKGPFSNFKFAAE 193
+ + + V G+ D G NS+ D N +
Sbjct: 165 TMDVAWQVIVDGNLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVE---- 220
Query: 194 KECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSK 253
G + I + + + ++ P + +PD K
Sbjct: 221 -----RIAAAVKAGNFKTIGDSKVPVVDGRGESE-----FTRYIPVPKNPHGLNTSPDGK 270
Query: 254 Y-VISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTIQFNP 293
Y + +G + + +K L D TI P
Sbjct: 271 YFIANGKLSPTVSVIAIDKLDD---LFEDKIELRDTIVAEP 308
Score = 34.1 bits (78), Expect = 0.018
Identities = 40/258 (15%), Positives = 75/258 (29%), Gaps = 68/258 (26%)
Query: 23 KITSIDYSADG-LLLISCSEDDQIVIYDCELGTNKRT--VFSKKYGVDLIRFTHAKQAAI 79
+ + D G +C ++ V + ++ VF+ + ++ + K
Sbjct: 177 NLDNTDADYTGKYATSTCYNSERAVDLAGTMRNDRDWVVVFNVERIAAAVKAGNFKTIGD 236
Query: 80 HASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDD-TFISGSYDKTVRLWDLRS 138
+D ++++ RY P K + L SP +G TV + +
Sbjct: 237 SKVPVVDGRG------ESEFTRYIPVP-KNPHGLNTSPDGKYFIANGKLSPTVSVIAID- 288
Query: 139 PNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKGPFSNFKFAAEKECDW 198
+ F+ D I+L D AE E
Sbjct: 289 ------------KLDDLFE------------DKIELRDT------------IVAEPELGL 312
Query: 199 TGIKFSADGKYILISTNG--------SIIRTFDAYNGQ---------CLQTLAGFLNNKG 241
+ + DG+ +T +I YNG +Q G +
Sbjct: 313 GPLHTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNH--- 369
Query: 242 CPLEASFTPDSKYVISGS 259
L S D K+++ S
Sbjct: 370 ASLTESRDADGKWLVVLS 387
Score = 32.6 bits (74), Expect = 0.067
Identities = 21/144 (14%), Positives = 43/144 (29%), Gaps = 21/144 (14%)
Query: 122 FISGSYDKTVRLWDLRSPNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFD 181
F SG + VR+ + S M I F+ + G G+ +++ + + D
Sbjct: 14 FWSGGHQGEVRVLGVPS------MRE--LMRIPVFNVDSAT-GWGITNESKE---ILGGD 61
Query: 182 KGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGS-IIRTFDAYNGQCLQTLAGFLNNK 240
+ + + DGKY+ I+ + + + + + N
Sbjct: 62 QQYLN----GDCHHPHISMTDGRYDGKYLFINDKANTRVARIRLDIMKTDKITH--IPNV 115
Query: 241 GCPLEASFTPDSK--YVISGSTDG 262
K YV +
Sbjct: 116 QAIHGLRLQKVPKTNYVFCNAEFV 139
Score = 30.6 bits (69), Expect = 0.25
Identities = 19/121 (15%), Positives = 39/121 (32%), Gaps = 18/121 (14%)
Query: 7 VIRSYKVAKLFRENTDKITSIDYSAD-GLLLISCSEDDQIVIYDCELGTNKRTVFSKKYG 65
VI K+ LF + + +I + GL + + D + Y T+F
Sbjct: 284 VIAIDKLDDLFEDKIELRDTIVAEPELGLGPLHTTFDGRGNAYT--------TLFIDSQ- 334
Query: 66 VDLIRFTHAKQAAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISG 125
+ ++ A + +++ + L + Y PGH + +
Sbjct: 335 --VCKWNIADAIKHYNGDRVNYIRQKLDVQ------YQPGHNHASLTESRDADGKWLVVL 386
Query: 126 S 126
S
Sbjct: 387 S 387
>d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26,
N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]}
Length = 470
Score = 35.1 bits (79), Expect = 0.012
Identities = 19/166 (11%), Positives = 44/166 (26%), Gaps = 10/166 (6%)
Query: 78 AIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNSLCLSPIDDTFISGSYDKTVRLWDLR 137
S+ + + + + L I + + + +
Sbjct: 291 DYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQ 350
Query: 138 SPNCQGIMHVSGSRP---IAAFDPEGLIFGVGVNSDTIK---LYDVRSFDKGPFSNFKF- 190
G+ I A + L + LY ++ D +
Sbjct: 351 IDKKDCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCE 410
Query: 191 AAEKECDWTGIKFSADGKYILISTNGS---IIRTFDAYNGQCLQTL 233
+ C + + FS + KY + +G + + N + L+ L
Sbjct: 411 LNPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL 456
Score = 32.4 bits (72), Expect = 0.075
Identities = 16/121 (13%), Positives = 44/121 (36%), Gaps = 11/121 (9%)
Query: 200 GIKFSADGKYILISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVISG- 258
+++ +D +Y+ N ++ + N + F + S +PD ++++
Sbjct: 21 SLRWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEY 80
Query: 259 --------STDGRIHIWNAEKGFKVCVLDADHPSPVQTIQFNPKFNMMASACTNLAFWIP 310
S I++ K + + + P+ Q + ++P + +A N +
Sbjct: 81 NYVKQWRHSYTASYDIYDLNK--RQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKI 138
Query: 311 T 311
Sbjct: 139 E 139
Score = 32.0 bits (71), Expect = 0.093
Identities = 9/52 (17%), Positives = 17/52 (32%)
Query: 168 NSDTIKLYDVRSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSII 219
+ I +++ + F E S DG++IL+ N
Sbjct: 34 QENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQ 85
Score = 29.3 bits (64), Expect = 0.71
Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 14/165 (8%)
Query: 124 SGSYDKTVRLWDLRSPNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDTIKLYDVRSFDKG 183
SG ++ V + + S P D + + + K
Sbjct: 296 SGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK- 354
Query: 184 PFSNFKFAAEKECDWTGIK-FSADGKYILISTNGSIIRTFDAY-----NGQCLQTLAGFL 237
+ F + + GI+ ++D Y + + + + Y + + L+ L
Sbjct: 355 ---DCTFITKGTWEVIGIEALTSDYLYYISNEYKGMPGGRNLYKIQLSDYTKVTCLSCEL 411
Query: 238 NNKGCPL-EASFTPDSKYVI---SGSTDGRIHIWNAEKGFKVCVL 278
N + C SF+ ++KY SG + ++ + VL
Sbjct: 412 NPERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHSSVNDKGLRVL 456
>d1v58a2 d.17.3.1 (A:2-61) Thiol:disulfide interchange protein DsbG,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 60
Score = 30.5 bits (69), Expect = 0.035
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 211 LISTNGSIIRTFDAYNGQCLQTLAGFLNNKGCPLEASFTPDSKYVISGS 259
+ +II+TFDA G ++ G + G + TPD K+ ISG
Sbjct: 9 IEKQGITIIKTFDAPGG--MKGYLGKYQDMGVTI--YLTPDGKHAISGY 53
>d1hyqa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Archaeoglobus fulgidus [TaxId: 2234]}
Length = 232
Score = 28.6 bits (62), Expect = 0.84
Identities = 9/67 (13%), Positives = 23/67 (34%), Gaps = 1/67 (1%)
Query: 269 AEKGFKVCVLDADHPSPVQTIQFNPKFNMMASACTNLAFWIPTYLSNHQEPDTIDNLKIY 328
A+ G V ++DAD + + + + LA + + P + +
Sbjct: 27 AQLGHDVTIVDADITMANLELILGMEGLPV-TLQNVLAGEARIDEAIYVGPGGVKVVPAG 85
Query: 329 LGVLCYQ 335
+ + +
Sbjct: 86 VSLEGLR 92
>d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue
{Nostoc punctiforme [TaxId: 272131]}
Length = 302
Score = 28.9 bits (63), Expect = 0.85
Identities = 10/79 (12%), Positives = 24/79 (30%), Gaps = 4/79 (5%)
Query: 230 LQTLAGFLNNKGCPLEASFTPDSKYVISGSTDGRIHIWNAEKGFKVCVLDADHPSPVQTI 289
+ + F N + PD ++ G I + ++ A V +
Sbjct: 18 AKIITSFPVNTF-LENLASAPDGTIFVTNHEVGEIVSITPDGNQQIH---ATVEGKVSGL 73
Query: 290 QFNPKFNMMASACTNLAFW 308
F +++A+ +
Sbjct: 74 AFTSNGDLVATGWNADSIP 92
>d1g3qa_ c.37.1.10 (A:) Cell division regulator MinD {Archaeon
Pyrococcus furiosus [TaxId: 2261]}
Length = 237
Score = 28.5 bits (62), Expect = 1.1
Identities = 5/24 (20%), Positives = 10/24 (41%)
Query: 269 AEKGFKVCVLDADHPSPVQTIQFN 292
++G KV +D D ++
Sbjct: 28 GDRGRKVLAVDGDLTMANLSLVLG 51
>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st
ketoreductase module {Saccharopolyspora erythraea
[TaxId: 1836]}
Length = 259
Score = 27.7 bits (60), Expect = 2.1
Identities = 9/37 (24%), Positives = 17/37 (45%), Gaps = 3/37 (8%)
Query: 245 EASFTPDSKYVISGSTDG---RIHIWNAEKGFKVCVL 278
+ + P +++G T G +I W A +G +L
Sbjct: 3 DDEWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLL 39
>d1mw5a_ d.259.1.1 (A:) Hypothetical protein HI1480 {Haemophilus
influenzae [TaxId: 727]}
Length = 162
Score = 27.0 bits (59), Expect = 2.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 1 MKLTDNVIRSYKVAKLFRENTDKITSIDYS 30
MK+ ++ Y VA LF E ++ IT +++S
Sbjct: 6 MKMVRQPVKLYSVATLFHEFSEVITKLEHS 35
>d1ihua1 c.37.1.10 (A:1-296) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 296
Score = 27.3 bits (59), Expect = 2.8
Identities = 8/54 (14%), Positives = 17/54 (31%), Gaps = 1/54 (1%)
Query: 269 AEKGFKVCVLDADHPSPVQTIQFNPKFNMMASACTNLAFWIPTYLSNHQEPDTI 322
AE+G +V ++ D P+ F+ A ++ +
Sbjct: 33 AEQGKRVLLVSTD-PASNVGQVFSQTIGNTIQAIASVPGLSALEIDPQAAAQQY 85
>d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia
coli [TaxId: 562]}
Length = 269
Score = 27.1 bits (58), Expect = 2.9
Identities = 29/245 (11%), Positives = 67/245 (27%), Gaps = 9/245 (3%)
Query: 53 GTNKRTVFSKKYGVDLIRFTHAKQAAIHASTKIDDTVRYLSLHDNKYIRYFPGHTKKVNS 112
G N+ V + ++ + + + + + N +R + +
Sbjct: 28 GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGA 87
Query: 113 LCLSPIDDTFISGSY-DKTVRLWDLRSPNCQGIMHVSGSRPIAAFDPEGLIFGVGVNSDT 171
SP ++ L+ + + Q G + SD
Sbjct: 88 PAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQ 147
Query: 172 IKLYDVRSFDKGPFSNFKFAAEKECDWTGIKFSADGKYILISTNGSIIRTFDAYNGQCLQ 231
V + + + E + S +++S+NG
Sbjct: 148 AGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 207
Query: 232 TLAGFLNNKGCPLEASFTPDSKYVISGSTDG---RIHIWNAEKGFKVCVLDADHPSPVQT 288
+ P S P+ VI S+ G +++ + + FK + V+
Sbjct: 208 QVLSSTFLDETP---SLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLP--ATDGQVKF 262
Query: 289 IQFNP 293
++P
Sbjct: 263 PAWSP 267
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 279
Score = 26.9 bits (58), Expect = 3.5
Identities = 11/64 (17%), Positives = 24/64 (37%), Gaps = 1/64 (1%)
Query: 269 AEKGFKVCVLDADHPSPVQTIQFNPKFNMMASACTNLAFWIPTYLSNHQEPDTIDNLKIY 328
A+ GF V + +D P+ ++ N N + + + Y + E + +
Sbjct: 45 ADMGFDVHLTTSD-PAAHLSMTLNGSLNNLQVSRIDPHEETERYRQHVLETKGKELDEAG 103
Query: 329 LGVL 332
+L
Sbjct: 104 KRLL 107
>d2afhe1 c.37.1.10 (E:1-289) Nitrogenase iron protein {Azotobacter
vinelandii [TaxId: 354]}
Length = 289
Score = 25.6 bits (55), Expect = 9.0
Identities = 6/13 (46%), Positives = 8/13 (61%)
Query: 269 AEKGFKVCVLDAD 281
AE G KV ++ D
Sbjct: 27 AEMGKKVMIVGCD 39
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.321 0.137 0.423
Gapped
Lambda K H
0.267 0.0415 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,287,582
Number of extensions: 60408
Number of successful extensions: 502
Number of sequences better than 10.0: 1
Number of HSP's gapped: 313
Number of HSP's successfully gapped: 141
Length of query: 335
Length of database: 2,407,596
Length adjustment: 86
Effective length of query: 249
Effective length of database: 1,226,816
Effective search space: 305477184
Effective search space used: 305477184
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)