BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16318
(474 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|91084029|ref|XP_966465.1| PREDICTED: similar to alanyl-tRNA synthetase [Tribolium castaneum]
gi|270006700|gb|EFA03148.1| hypothetical protein TcasGA2_TC013061 [Tribolium castaneum]
Length = 965
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 93/138 (67%), Gaps = 22/138 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
NKQFV+ V +G E GILLDK+NFYAEQGGQIYD G+++ + DES
Sbjct: 514 NKQFVEQVHTGQECGILLDKTNFYAEQGGQIYDTGYIVKIGDES---------------- 557
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
++FS+ N++ + V + +L TL+ GDK+ LH+D+ARRR IM+NHT TH+LN
Sbjct: 558 ------VEFSVKNVQVRGGYVIHIGSLEGTLKKGDKVALHVDSARRRLIMNNHTGTHVLN 611
Query: 442 HALRFVLGPEADQKGSLV 459
+ALR VLG EADQ+GSLV
Sbjct: 612 YALRKVLGTEADQRGSLV 629
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+TI KLG+SK LPGDVAWRLYDTYGFPVDLTQLM EEKGL+VDM VYE++KK AQ +
Sbjct: 395 RTITKLGDSKTLPGDVAWRLYDTYGFPVDLTQLMAEEKGLNVDMAVYEESKKLAQIASQG 454
Query: 63 Q-AGMETSVEF 72
+ +G+E ++
Sbjct: 455 KGSGVEDTINL 465
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 38/48 (79%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
+ +NKQFV+ V +G E GILLDK+NFYAEQGGQIYD G+++ + DE
Sbjct: 509 IALRHNKQFVEQVHTGQECGILLDKTNFYAEQGGQIYDTGYIVKIGDE 556
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 48/88 (54%), Gaps = 15/88 (17%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + + + L VD P AG TS+EFCGGTHL + H
Sbjct: 688 ETYPDPVRIVSIGIPVEKLEVD--------------PFGPAGDNTSIEFCGGTHLKYSGH 733
Query: 84 VGDFCISSEEAIAKG-SNIVSYCGSKGT 110
+GDF I+SEEAIAKG IV+ G + T
Sbjct: 734 IGDFVIASEEAIAKGIRRIVALTGPEAT 761
>gi|357612410|gb|EHJ67979.1| alanyl-tRNA synthetase, cytoplasmic [Danaus plexippus]
Length = 530
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 95/148 (64%), Gaps = 22/148 (14%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
NKQFVD VSSG E GI+LD++NFYAEQGGQI+DEG+M+ ++DES
Sbjct: 74 ALRRNKQFVDEVSSGQECGIILDRTNFYAEQGGQIFDEGYMVKLDDES------------ 121
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
++F++ +++ K V + + TL+VGD++ LHIDT RRR +M+NHT T
Sbjct: 122 ----------VEFTVKSVQVKGGYVLHIGKVEGTLKVGDRVSLHIDTERRRLVMNNHTGT 171
Query: 438 HILNHALRFVLGPEADQKGSLVYRYHLH 465
HILN+ LR VLG ++DQ+GSLV L
Sbjct: 172 HILNNVLRKVLGNDSDQRGSLVMPDRLR 199
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/46 (67%), Positives = 39/46 (84%)
Query: 230 FSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
NKQFVD VSSG E GI+LD++NFYAEQGGQI+DEG+M+ ++DE
Sbjct: 75 LRRNKQFVDEVSSGQECGIILDRTNFYAEQGGQIFDEGYMVKLDDE 120
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHS 115
++ P+ +G ETSVEFCGG+HL H+GD+ I SEE IAKG IV+ G + +
Sbjct: 271 ENNPDGLSGFETSVEFCGGSHLHQTGHIGDYVIVSEEGIAKGIRRIVALTGPEAIKALNK 330
Query: 116 GSINDEMVNKYPSLYR 131
S + VN +L +
Sbjct: 331 MSSLENEVNAIANLIK 346
>gi|73957022|ref|XP_536788.2| PREDICTED: alanyl-tRNA synthetase, cytoplasmic isoform 1 [Canis
lupus familiaris]
Length = 968
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/239 (37%), Positives = 128/239 (53%), Gaps = 54/239 (22%)
Query: 247 GILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLD---- 302
G +D + AE+ G + D M G +E + L+ + +G E I+LD
Sbjct: 419 GFPVDLTGLIAEEKGMVVD---MDGFEEERKLAQLKSQGK-----GAGGEDLIMLDIYAI 470
Query: 303 ---------------KSNFYAEQGGQIYDEGFMS-------NKQFVDSVSSGTEAGILLD 340
K N++++ G E ++ +K FV+ VS+G E G++LD
Sbjct: 471 EELREKGLEATEDSPKYNYHSDSSGSYTFENVVATVVALRRDKMFVEEVSTGQECGVVLD 530
Query: 341 KSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKK 400
K+ FYAEQGGQIYDEG+++ V D S+ ++ +F++ N + +
Sbjct: 531 KTCFYAEQGGQIYDEGYLVKVEDNSEDKM-------------------EFTVKNAQVRGG 571
Query: 401 LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
V + T+ +LRVGD+++L ID RRRPIMSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 572 YVLHIGTIYGSLRVGDQVRLFIDEPRRRPIMSNHTATHILNFALRSVLG-EADQKGSLV 629
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ +PGD AW LYDTYGFPVDLT L+ EEKG+ VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDCNTIPGDTAWLLYDTYGFPVDLTGLIAEEKGMVVDMDGFEEERKLAQ 449
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 35/42 (83%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
+K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V D
Sbjct: 512 DKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVED 553
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I SEEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLQNSSHAGAFVIVSEEAIAKGIRRIVAVTGAEA 760
>gi|260784931|ref|XP_002587517.1| hypothetical protein BRAFLDRAFT_237056 [Branchiostoma floridae]
gi|229272665|gb|EEN43528.1| hypothetical protein BRAFLDRAFT_237056 [Branchiostoma floridae]
Length = 751
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 90/138 (65%), Gaps = 18/138 (13%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
+KQFV V+ G E G+LLD++NFYAEQGGQIYDEG+++ DE +
Sbjct: 514 DKQFVQEVTQGQECGVLLDRTNFYAEQGGQIYDEGYLVKEEDEVK--------------- 558
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++ N + + V + TL TL VGDK+KL +D ARRRPIMSNHT+TH+LN
Sbjct: 559 --RTAETEFTVKNCQVRGGYVMHIGTLVGTLNVGDKVKLFVDEARRRPIMSNHTSTHVLN 616
Query: 442 HALRFVLGPEADQKGSLV 459
ALR VLG EADQ+GSLV
Sbjct: 617 FALRQVLG-EADQRGSLV 633
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 40/71 (56%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ I +LG+SKV+PG+ AW LYDTYGFPVDLT LM EEKGL++D YE+ KK+AQ +
Sbjct: 397 KRITQLGDSKVVPGETAWLLYDTYGFPVDLTSLMAEEKGLTLDCAAYEECKKQAQIRSQG 456
Query: 63 Q-AGMETSVEF 72
+ AG++ SV
Sbjct: 457 KGAGVDDSVNL 467
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 35/43 (81%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
+KQFV V+ G E G+LLD++NFYAEQGGQIYDEG+++ DE
Sbjct: 514 DKQFVQEVTQGQECGVLLDRTNFYAEQGGQIYDEGYLVKEEDE 556
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 28/40 (70%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAK 97
S+P S AG TSVEFCGGTHL H GD I +EEAIAK
Sbjct: 712 SDPTSPAGTVTSVEFCGGTHLQRVGHAGDLVIVTEEAIAK 751
>gi|113195586|ref|NP_001037775.1| alanyl-tRNA synthetase, cytoplasmic isoform 1 [Danio rerio]
Length = 991
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 98/159 (61%), Gaps = 23/159 (14%)
Query: 302 DKSNFYAEQG-GQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 360
D N+ EQ G + + FVD V +G E G+LLDK++FYAEQGGQ +DEG+M+
Sbjct: 518 DNGNYEFEQAVGTVL--ALRRERMFVDEVITGQECGVLLDKTSFYAEQGGQSFDEGYMLR 575
Query: 361 VNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKL 420
ND ++ + +F++ N + + V + T+ TL+VGD+L L
Sbjct: 576 ENDSAEDRM-------------------EFTVKNTQVRGGYVLHIGTVYGTLKVGDRLTL 616
Query: 421 HIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
H+D ARRRPIMSNHTATHILN+ LR VLG EADQ+GSLV
Sbjct: 617 HVDEARRRPIMSNHTATHILNYGLRSVLG-EADQRGSLV 654
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 41/55 (74%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LGES +PGD AW LYDTYGFP+DLT L+ EE+G+ VD+ +E+ KK AQ
Sbjct: 420 RKIQSLGESTTIPGDTAWLLYDTYGFPLDLTALIAEERGMGVDLLAFEEEKKAAQ 474
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L + FVD V +G E G+LLDK++FYAEQGGQ +DEG+M+ ND
Sbjct: 532 LALRRERMFVDEVITGQECGVLLDKTSFYAEQGGQSFDEGYMLREND 578
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
++P S AG TS+EFCGGTHL + H F I SEEAIAKG IV+ G++
Sbjct: 733 ADPNSPAGSLTSIEFCGGTHLQNSSHAAPFVIVSEEAIAKGIRRIVAVTGAEA 785
>gi|118763839|gb|AAI28795.1| Aars protein [Danio rerio]
Length = 966
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 98/159 (61%), Gaps = 23/159 (14%)
Query: 302 DKSNFYAEQG-GQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 360
D N+ EQ G + + FVD V +G E G+LLDK++FYAEQGGQ +DEG+M+
Sbjct: 493 DNGNYEFEQAVGTVL--ALRRERMFVDEVITGQECGVLLDKTSFYAEQGGQSFDEGYMLR 550
Query: 361 VNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKL 420
ND ++ + +F++ N + + V + T+ TL+VGD+L L
Sbjct: 551 ENDSAEDRM-------------------EFTVKNTQVRGGYVLHIGTVYGTLKVGDRLTL 591
Query: 421 HIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
H+D ARRRPIMSNHTATHILN+ LR VLG EADQ+GSLV
Sbjct: 592 HVDEARRRPIMSNHTATHILNYGLRSVLG-EADQRGSLV 629
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 41/55 (74%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+S +PGD AW LYDTYGFP+DLT L+ EE+G+ VD+ +E+ KK AQ
Sbjct: 395 RKIQSLGDSTTIPGDTAWLLYDTYGFPLDLTALIAEERGMGVDLLAFEEEKKAAQ 449
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L + FVD V +G E G+LLDK++FYAEQGGQ +DEG+M+ ND
Sbjct: 507 LALRRERMFVDEVITGQECGVLLDKTSFYAEQGGQSFDEGYMLREND 553
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
++P S AG TS+EFCGGTHL + H F I SEEAIAKG IV+ G++
Sbjct: 708 ADPNSPAGSLTSIEFCGGTHLQNSSHAAPFVIVSEEAIAKGIRRIVAVTGAEA 760
>gi|351701755|gb|EHB04674.1| Alanyl-tRNA synthetase, cytoplasmic [Heterocephalus glaber]
Length = 983
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 107/175 (61%), Gaps = 27/175 (15%)
Query: 292 SSGTEAGILLDKSNFYAEQ-GGQIYDEGFMS------NKQFVDSVSSGTEAGILLDKSNF 344
+ G EA K N++++ GG +++ + K FV+ VS+G E G+LLDK+ F
Sbjct: 475 ARGLEATDDSPKYNYHSDSSGGYLFESAVATVLALRREKMFVEEVSTGQECGVLLDKTCF 534
Query: 345 YAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKL 404
YAEQGGQIYDEG+++ V+D S+ + +F++ N + + V
Sbjct: 535 YAEQGGQIYDEGYLVKVDDSSEDKT-------------------EFTVKNAQVRGGYVLH 575
Query: 405 LHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+ T+ L+VGD+++L ID RRRPIMSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 576 IGTIYGNLKVGDQVRLFIDEPRRRPIMSNHTATHILNFALRSVLG-EADQKGSLV 629
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ K +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L K FV+ VS+G E G+LLDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 507 LALRREKMFVEEVSTGQECGVLLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 47/90 (52%), Gaps = 11/90 (12%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGS 117
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEAQ------- 761
Query: 118 INDEMVNKYPSLYRLFRTVHKQKYVQDALN 147
+ + K SL + F T+ + Q A N
Sbjct: 762 ---KALRKAESLKKSFSTMESKVKAQTAPN 788
>gi|47937910|gb|AAH71378.1| Aars protein, partial [Danio rerio]
Length = 757
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 98/159 (61%), Gaps = 23/159 (14%)
Query: 302 DKSNFYAEQG-GQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 360
D N+ EQ G + + FVD V +G E G+LLDK++FYAEQGGQ +DEG+M+
Sbjct: 493 DNGNYEFEQAVGTVL--ALRRERMFVDEVITGQECGVLLDKTSFYAEQGGQSFDEGYMLR 550
Query: 361 VNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKL 420
ND ++ + +F++ N + + V + T+ TL+VGD+L L
Sbjct: 551 ENDSAEDRM-------------------EFTVKNTQVRGGYVLHIGTVYGTLKVGDRLTL 591
Query: 421 HIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
H+D ARRRPIMSNHTATHILN+ LR VLG EADQ+GSLV
Sbjct: 592 HVDEARRRPIMSNHTATHILNYGLRSVLG-EADQRGSLV 629
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 41/55 (74%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+S +PGD AW LYDTYGFP+DLT L+ EE+G+ VD+ +E+ KK AQ
Sbjct: 395 RKIQSLGDSTTIPGDTAWLLYDTYGFPLDLTALIAEERGMGVDLLAFEEEKKAAQ 449
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L + FVD V +G E G+LLDK++FYAEQGGQ +DEG+M+ ND
Sbjct: 507 LALRRERMFVDEVITGQECGVLLDKTSFYAEQGGQSFDEGYMLREND 553
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 27/39 (69%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIA 96
++P S AG TS+EFCGGTHL + H F I SEEAIA
Sbjct: 708 ADPNSPAGSLTSIEFCGGTHLQNSSHAAPFVIVSEEAIA 746
>gi|410983936|ref|XP_003998291.1| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase, cytoplasmic
[Felis catus]
Length = 968
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/158 (46%), Positives = 97/158 (61%), Gaps = 20/158 (12%)
Query: 302 DKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 361
D S YA + +K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V
Sbjct: 492 DSSGSYAFESAVATVMALRRDKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKV 551
Query: 362 NDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLH 421
D S+ + +F++ N + + V + T+ +LRVGD+++L
Sbjct: 552 EDSSEDKT-------------------EFTVKNAQVRGGYVLHIGTIYGSLRVGDQVRLF 592
Query: 422 IDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
ID RRRPIMSNHTATHILN ALR VLG EADQ+GSLV
Sbjct: 593 IDEPRRRPIMSNHTATHILNFALRSVLG-EADQRGSLV 629
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ I LG+ K +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ + +
Sbjct: 395 RKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKSQG 454
Query: 63 Q-AGME 67
+ AG E
Sbjct: 455 KGAGAE 460
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
+ +K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V D
Sbjct: 507 MALRRDKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVED 553
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I SEEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLQNSSHAGAFVIVSEEAIAKGIRRIVAVTGAEA 760
>gi|291390471|ref|XP_002711725.1| PREDICTED: alanyl-tRNA synthetase [Oryctolagus cuniculus]
Length = 945
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 105/175 (60%), Gaps = 27/175 (15%)
Query: 292 SSGTEAGILLDKSNFYAEQGGQIYDEGFMSN-------KQFVDSVSSGTEAGILLDKSNF 344
+ G EA K N+ A+ G E ++ K FV+ VS+G E G++LDK+ F
Sbjct: 452 AKGLEATDDSPKYNYQADSSGSYVFESTVATVLALRREKMFVEEVSTGQECGVVLDKTCF 511
Query: 345 YAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKL 404
YAEQGGQIYDEG+++ V+D S+ + +F++ N + + V
Sbjct: 512 YAEQGGQIYDEGYLVKVDDSSEDKT-------------------EFTVKNAQVRGGYVLH 552
Query: 405 LHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+ T+ +LRVGD+++L ID RRRP+MSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 553 IGTVYGSLRVGDQVRLFIDEPRRRPVMSNHTATHILNFALRSVLG-EADQKGSLV 606
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ K +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 372 RKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 426
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 484 LALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 530
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H GDF I +EEAIAKG IV+ G++
Sbjct: 686 DPSGPAGSLTSVEFCGGTHLRNSSHAGDFVIVTEEAIAKGIRRIVAVTGAEA 737
>gi|344290803|ref|XP_003417126.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic [Loxodonta africana]
Length = 968
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 82/200 (41%), Positives = 112/200 (56%), Gaps = 38/200 (19%)
Query: 292 SSGTEAGILLDKSNFYAEQGGQIYDEGFMS-------NKQFVDSVSSGTEAGILLDKSNF 344
S G EA K N++++ G E ++ +K FV+ VS+G E G++LDK+ F
Sbjct: 475 SKGLEATDDSPKYNYHSDSSGSYVFENAVATVMALRRDKTFVEEVSTGQECGVVLDKTCF 534
Query: 345 YAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKL 404
YAEQGGQIYDEG+++ V+D S+ + +F++ N + + V
Sbjct: 535 YAEQGGQIYDEGYLVKVDDNSEDKT-------------------EFTVKNAQVRGGYVLH 575
Query: 405 LHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHL 464
+ T+ L+VGD+++L ID RRRP+MSNHTATHILN ALR VLG EADQKGSLV L
Sbjct: 576 IGTIYGNLKVGDQVRLFIDEPRRRPVMSNHTATHILNFALRSVLG-EADQKGSLVAPDRL 634
Query: 465 H-----------ENIMECEE 473
E I E EE
Sbjct: 635 RFDFTAKGAMSTEQIKEAEE 654
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 44/55 (80%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL+VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLAVDMDGFEEERKLAQ 449
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 37/47 (78%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
+ +K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 507 MALRRDKTFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I SEEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLQNSSHAGAFVIVSEEAIAKGIRRIVAVTGAEA 760
>gi|348572772|ref|XP_003472166.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Cavia
porcellus]
Length = 968
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 107/175 (61%), Gaps = 27/175 (15%)
Query: 292 SSGTEAGILLDKSNFYAEQGGQIYDEGFMSN-------KQFVDSVSSGTEAGILLDKSNF 344
+ G EA K +++++ GG E ++ K FV+ VS+G E G++LDK+ F
Sbjct: 475 AKGLEATDDSPKYDYHSDSGGSYVFESAVATVLALRREKMFVEEVSTGQECGVVLDKTCF 534
Query: 345 YAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKL 404
YAEQGGQIYDEG+++ V+D S+ + +F++ N + + V
Sbjct: 535 YAEQGGQIYDEGYLVKVDDSSEDKT-------------------EFTVKNTQVRGGYVLH 575
Query: 405 LHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+ T+ +L+VGD+++L ID RRRPIMSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 576 IGTIYGSLKVGDQVRLFIDEPRRRPIMSNHTATHILNFALRSVLG-EADQKGSLV 629
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ K +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 507 LALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLQNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|149699352|ref|XP_001501062.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic [Equus caballus]
Length = 968
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 103/173 (59%), Gaps = 27/173 (15%)
Query: 294 GTEAGILLDKSNFYAEQGGQIYDE-------GFMSNKQFVDSVSSGTEAGILLDKSNFYA 346
G EA K N+Y++ G E +K FV+ VS+G E G++LDK+ FYA
Sbjct: 477 GLEATDDSPKYNYYSDSSGSYVFESAVATVMALRRDKMFVEEVSTGQECGVVLDKTCFYA 536
Query: 347 EQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLH 406
EQGGQIYDEG+++ V+D S+ + +F++ N + + V +
Sbjct: 537 EQGGQIYDEGYLVKVDDSSEDK-------------------TEFTVKNAQVRGGYVLHIG 577
Query: 407 TLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
T+ L+VGD+++L ID RRRP+MSNHTATHILN ALR VLG EADQ+GSLV
Sbjct: 578 TIYGNLKVGDQVRLFIDEPRRRPVMSNHTATHILNFALRSVLG-EADQRGSLV 629
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LGESK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGESKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 37/47 (78%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
+ +K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 507 MALRRDKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I SEEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLQNSSHAGAFVIVSEEAIAKGIRRIVAVTGAEA 760
>gi|169154546|emb|CAQ13590.1| novel protein similar to vertebrate alanyl-tRNA synthetase (AARS)
[Danio rerio]
Length = 988
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 96/159 (60%), Gaps = 26/159 (16%)
Query: 302 DKSNFYAEQG-GQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 360
D N+ EQ G + + FVD V +G E G+LLDK++FYAEQGGQ +DEG+M+
Sbjct: 518 DNGNYEFEQAVGTVL--ALRRERMFVDEVITGQECGVLLDKTSFYAEQGGQSFDEGYMLR 575
Query: 361 VNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKL 420
ND ++ F++ N + + V + T+ TL+VGD+L L
Sbjct: 576 ENDSAE----------------------DFTVKNTQVRGGYVLHIGTVYGTLKVGDRLTL 613
Query: 421 HIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
H+D ARRRPIMSNHTATHILN+ LR VLG EADQ+GSLV
Sbjct: 614 HVDEARRRPIMSNHTATHILNYGLRSVLG-EADQRGSLV 651
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 41/55 (74%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+S +PGD AW LYDTYGFP+DLT L+ EE+G+ VD+ +E+ KK AQ
Sbjct: 420 RKIQSLGDSTTIPGDTAWLLYDTYGFPLDLTALIAEERGMGVDLLAFEEEKKAAQ 474
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L + FVD V +G E G+LLDK++FYAEQGGQ +DEG+M+ ND
Sbjct: 532 LALRRERMFVDEVITGQECGVLLDKTSFYAEQGGQSFDEGYMLREND 578
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
++P S AG TS+EFCGGTHL + H F I SEEAIAKG IV+ G++
Sbjct: 730 ADPNSPAGSLTSIEFCGGTHLQNSSHAAPFVIVSEEAIAKGIRRIVAVTGAEA 782
>gi|169154547|emb|CAQ13591.1| novel protein similar to vertebrate alanyl-tRNA synthetase (AARS)
[Danio rerio]
Length = 963
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 96/159 (60%), Gaps = 26/159 (16%)
Query: 302 DKSNFYAEQG-GQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 360
D N+ EQ G + + FVD V +G E G+LLDK++FYAEQGGQ +DEG+M+
Sbjct: 493 DNGNYEFEQAVGTVL--ALRRERMFVDEVITGQECGVLLDKTSFYAEQGGQSFDEGYMLR 550
Query: 361 VNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKL 420
ND ++ F++ N + + V + T+ TL+VGD+L L
Sbjct: 551 ENDSAE----------------------DFTVKNTQVRGGYVLHIGTVYGTLKVGDRLTL 588
Query: 421 HIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
H+D ARRRPIMSNHTATHILN+ LR VLG EADQ+GSLV
Sbjct: 589 HVDEARRRPIMSNHTATHILNYGLRSVLG-EADQRGSLV 626
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 41/55 (74%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+S +PGD AW LYDTYGFP+DLT L+ EE+G+ VD+ +E+ KK AQ
Sbjct: 395 RKIQSLGDSTTIPGDTAWLLYDTYGFPLDLTALIAEERGMGVDLLAFEEEKKAAQ 449
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L + FVD V +G E G+LLDK++FYAEQGGQ +DEG+M+ ND
Sbjct: 507 LALRRERMFVDEVITGQECGVLLDKTSFYAEQGGQSFDEGYMLREND 553
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
++P S AG TS+EFCGGTHL + H F I SEEAIAKG IV+ G++
Sbjct: 705 ADPNSPAGSLTSIEFCGGTHLQNSSHAAPFVIVSEEAIAKGIRRIVAVTGAEA 757
>gi|426242177|ref|XP_004014951.1| PREDICTED: alanine--tRNA ligase, cytoplasmic isoform 1 [Ovis aries]
gi|426242179|ref|XP_004014952.1| PREDICTED: alanine--tRNA ligase, cytoplasmic isoform 2 [Ovis aries]
Length = 968
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 93/138 (67%), Gaps = 20/138 (14%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
+K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D S+ +
Sbjct: 512 DKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKT------------ 559
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++ N + + V + TL +L+VGD+++L ID RRRP+MSNHTATHILN
Sbjct: 560 -------EFTVKNTQVRGGYVLHIGTLYGSLKVGDQVRLFIDEPRRRPVMSNHTATHILN 612
Query: 442 HALRFVLGPEADQKGSLV 459
ALR VLG EADQ+GSLV
Sbjct: 613 FALRSVLG-EADQRGSLV 629
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +++ +K AQ
Sbjct: 395 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTALIAEEKGLVVDMDGFDEERKLAQ 449
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 37/47 (78%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
+ +K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 507 MALRRDKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I SEEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLQNSSHAGVFVIVSEEAIAKGIRRIVAVTGAEA 760
>gi|431912458|gb|ELK14592.1| Alanyl-tRNA synthetase, cytoplasmic [Pteropus alecto]
Length = 1118
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 98/158 (62%), Gaps = 20/158 (12%)
Query: 302 DKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 361
D S YA + +K F++ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V
Sbjct: 620 DSSGSYAFESAVATVMALRRDKTFIEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKV 679
Query: 362 NDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLH 421
+D S+ + +F++ N + + V + T+ +L+VGD+++L
Sbjct: 680 DDSSEDK-------------------TEFTVKNTQVRGGYVLHIGTIYGSLKVGDQVRLF 720
Query: 422 IDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
ID RRRP+MSNHTATHILN ALR VLG EADQ+GSLV
Sbjct: 721 IDEPRRRPVMSNHTATHILNFALRSVLG-EADQRGSLV 757
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 523 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLLVDMDGFEEERKMAQ 577
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 37/47 (78%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
+ +K F++ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 635 MALRRDKTFIEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 681
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I SEEAIAKG IV+ G++
Sbjct: 837 DPSGPAGSLTSVEFCGGTHLQNSSHAGAFVIVSEEAIAKGIRRIVAVTGAEA 888
>gi|37573979|gb|AAH58620.1| Aars protein, partial [Mus musculus]
Length = 507
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 91/148 (61%), Gaps = 20/148 (13%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
K FVD V +G E G++LDK+ FYAEQGGQIYDEG+++ V+D S+ +
Sbjct: 47 ALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKT-------- 98
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
+F++ N + + V + T+ L+VGD+++L ID RRRP+MSNHTAT
Sbjct: 99 -----------EFTVKNAQVRGGYVLHIGTIYGNLKVGDQVRLFIDEPRRRPVMSNHTAT 147
Query: 438 HILNHALRFVLGPEADQKGSLVYRYHLH 465
HILN ALR VLG EADQKGSLV L
Sbjct: 148 HILNFALRSVLG-EADQKGSLVAPDRLR 174
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L K FVD V +G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 46 LALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 92
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 248 DPCGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 299
>gi|211827288|gb|AAH26611.2| Aars protein [Mus musculus]
Length = 458
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 91/143 (63%), Gaps = 20/143 (13%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K FVD V +G E G++LDK+ FYAEQGGQIYDEG+++ V+D S+ +
Sbjct: 3 KMFVDEVVTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKT------------- 49
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+F++ N + + V + T+ L+VGD+++L ID RRRP+MSNHTATHILN
Sbjct: 50 ------EFTVKNAQVRGGYVLHIGTIYGNLKVGDQVRLFIDEPRRRPVMSNHTATHILNF 103
Query: 443 ALRFVLGPEADQKGSLVYRYHLH 465
ALR VLG EADQKGSLV L
Sbjct: 104 ALRSVLG-EADQKGSLVAPDRLR 125
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 34/41 (82%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
K FVD V +G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 3 KMFVDEVVTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 43
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 199 DPCGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 250
>gi|148679537|gb|EDL11484.1| alanyl-tRNA synthetase, isoform CRA_a [Mus musculus]
Length = 1055
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 123/223 (55%), Gaps = 32/223 (14%)
Query: 245 EAGILLDKSNFYAEQG-GQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDK 303
E G+++D + F E+ Q+ +G G DE ++ Y + + + G EA K
Sbjct: 518 EKGLVVDMNGFEEERRLAQLKSQG--KGAGDEDLIMLDIYAIE--ELRAKGLEATDDSPK 573
Query: 304 SNFYAEQGGQIYDE-------GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 356
N+ ++ G E K FVD V +G E G++LDK+ FYAEQGGQIYDEG
Sbjct: 574 YNYQSDSSGSYVFECTVATVLALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIYDEG 633
Query: 357 FMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGD 416
+++ V+D S+ + +F++ N + + V + T+ L+VGD
Sbjct: 634 YLVKVDDSSEDKT-------------------EFTVKNAQVRGGYVLHIGTIYGNLKVGD 674
Query: 417 KLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+++L ID RRRP+MSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 675 QVRLFIDEPRRRPVMSNHTATHILNFALRSVLG-EADQKGSLV 716
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ K +PGD AW LYDTYGFPVDLT L+ EEKGL VDM +E+ ++ AQ
Sbjct: 482 RKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMNGFEEERRLAQ 536
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L K FVD V +G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 594 LALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 640
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 796 DPCGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 847
>gi|395508649|ref|XP_003758622.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Sarcophilus harrisii]
Length = 968
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 96/158 (60%), Gaps = 20/158 (12%)
Query: 302 DKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 361
D S Y + + K FVD VS+G E G++LDK+ FYAEQGGQIYDEGF++
Sbjct: 492 DSSGTYEFENPMATVQALRREKMFVDEVSTGQECGVVLDKTCFYAEQGGQIYDEGFLVKE 551
Query: 362 NDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLH 421
+D S+ + +F++ + + + V + T+ +LRVGD+++L
Sbjct: 552 DDSSEDK-------------------TEFTVKDAQVRGGYVLHIGTVYGSLRVGDRVRLF 592
Query: 422 IDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
ID RRRP+MSNHTATHILN ALR VLG EADQ+GSLV
Sbjct: 593 IDEPRRRPVMSNHTATHILNFALRSVLG-EADQRGSLV 629
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 41/55 (74%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ K +PGD AW LYDTYGFPVDLT L+ EEKGL VDM +E+ +K AQ
Sbjct: 395 RKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMNGFEEERKLAQ 449
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 35/54 (64%)
Query: 221 HTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
P K FVD VS+G E G++LDK+ FYAEQGGQIYDEGF++ +D
Sbjct: 500 ENPMATVQALRREKMFVDEVSTGQECGVVLDKTCFYAEQGGQIYDEGFLVKEDD 553
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 55 KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
K +P AG TSVEFCGGTHL + H G I SEEAIAKG IV+ G++
Sbjct: 705 KLLDDPSGPAGSLTSVEFCGGTHLQNSSHAGALVIVSEEAIAKGIRRIVAVTGTEA 760
>gi|355666148|gb|AER93439.1| alanyl-tRNA synthetase [Mustela putorius furo]
Length = 841
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 96/158 (60%), Gaps = 20/158 (12%)
Query: 302 DKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 361
D S YA + +K FV+ V +G E G++LDK+ FYAEQGGQIYDEG+++ V
Sbjct: 492 DSSGSYAFESAVATVMALRRDKMFVEEVCTGQECGVVLDKTCFYAEQGGQIYDEGYLVKV 551
Query: 362 NDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLH 421
D S+ + +F++ N + + V + T+ +LRVGD+++L
Sbjct: 552 EDNSEDKT-------------------EFTVKNAQVRGGYVLHIGTVYGSLRVGDQVRLF 592
Query: 422 IDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
ID RRRPIMSNHTATHILN ALR VLG EADQ+GSLV
Sbjct: 593 IDEPRRRPIMSNHTATHILNFALRSVLG-EADQRGSLV 629
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ K +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 34/42 (80%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
+K FV+ V +G E G++LDK+ FYAEQGGQIYDEG+++ V D
Sbjct: 512 DKMFVEEVCTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVED 553
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TS+EFCGGTHL + H G F I SEEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSIEFCGGTHLRNSSHAGTFVIVSEEAIAKGIRRIVAVTGAEA 760
>gi|74213943|dbj|BAE29394.1| unnamed protein product [Mus musculus]
Length = 968
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 123/223 (55%), Gaps = 32/223 (14%)
Query: 245 EAGILLDKSNFYAEQG-GQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDK 303
E G+++D + F E+ Q+ +G G DE ++ Y + + + G EA K
Sbjct: 431 EKGLVVDMNGFEEERRLAQLKSQG--KGAGDEDLIMLDIYAIEELRA--KGLEATDDSPK 486
Query: 304 SNFYAEQGGQIYDE-------GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 356
N+ ++ G E K FVD V +G E G++LDK+ FYAEQGGQIYDEG
Sbjct: 487 YNYQSDSSGSYVFECTVATVLALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIYDEG 546
Query: 357 FMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGD 416
+++ V+D S+ + +F++ N + + V + T+ L+VGD
Sbjct: 547 YLVKVDDSSEDKT-------------------EFTVKNAQVRGGYVLHIGTIYGNLKVGD 587
Query: 417 KLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+++L ID RRRP+MSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 588 QVRLFIDEPRRRPVMSNHTATHILNFALRSVLG-EADQKGSLV 629
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ K +PGD AW LYDTYGFPVDLT L+ EEKGL VDM +E+ ++ AQ
Sbjct: 395 RKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMNGFEEERRLAQ 449
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L K FVD V +G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 507 LALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPCGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|34610207|ref|NP_666329.2| alanine--tRNA ligase, cytoplasmic [Mus musculus]
gi|47117019|sp|Q8BGQ7.1|SYAC_MOUSE RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|23270912|gb|AAH33273.1| Alanyl-tRNA synthetase [Mus musculus]
gi|26351767|dbj|BAC39520.1| unnamed protein product [Mus musculus]
gi|148679538|gb|EDL11485.1| alanyl-tRNA synthetase, isoform CRA_b [Mus musculus]
Length = 968
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 123/223 (55%), Gaps = 32/223 (14%)
Query: 245 EAGILLDKSNFYAEQG-GQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDK 303
E G+++D + F E+ Q+ +G G DE ++ Y + + + G EA K
Sbjct: 431 EKGLVVDMNGFEEERRLAQLKSQG--KGAGDEDLIMLDIYAIEELRA--KGLEATDDSPK 486
Query: 304 SNFYAEQGGQIYDE-------GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 356
N+ ++ G E K FVD V +G E G++LDK+ FYAEQGGQIYDEG
Sbjct: 487 YNYQSDSSGSYVFECTVATVLALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIYDEG 546
Query: 357 FMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGD 416
+++ V+D S+ + +F++ N + + V + T+ L+VGD
Sbjct: 547 YLVKVDDSSEDKT-------------------EFTVKNAQVRGGYVLHIGTIYGNLKVGD 587
Query: 417 KLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+++L ID RRRP+MSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 588 QVRLFIDEPRRRPVMSNHTATHILNFALRSVLG-EADQKGSLV 629
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ K +PGD AW LYDTYGFPVDLT L+ EEKGL VDM +E+ ++ AQ
Sbjct: 395 RKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMNGFEEERRLAQ 449
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L K FVD V +G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 507 LALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPCGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|383858758|ref|XP_003704866.1| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase,
cytoplasmic-like [Megachile rotundata]
Length = 1206
Score = 127 bits (320), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 95/165 (57%), Gaps = 34/165 (20%)
Query: 307 YAEQGGQIYDE-----------GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDE 355
Y G ++Y+E NK FVD VSSG E GILLD++NFYAEQGGQIYDE
Sbjct: 489 YTVTGNKLYEEYEFAPCTGTVIALRRNKTFVDEVSSGEEVGILLDQTNFYAEQGGQIYDE 548
Query: 356 GFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRV 414
GF++ +DE + + N++ + V + T+ TL+
Sbjct: 549 GFLVKTDDEDT----------------------EVRIKNVQVRGGYVLHIGTVGQGTLKK 586
Query: 415 GDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
DK+ L++DT RRR +MSNHTATH+LN+ALR VLG E DQKGSLV
Sbjct: 587 NDKVYLNVDTTRRRFLMSNHTATHVLNYALRKVLGTEVDQKGSLV 631
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 52/63 (82%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+TIAKL S +LPGD+AWRLYDTYGFPVDLTQLM EEKGL +DM YE+AKK+AQ ++
Sbjct: 395 RTIAKLESSNILPGDIAWRLYDTYGFPVDLTQLMTEEKGLKIDMAGYEEAKKQAQLISQN 454
Query: 63 QAG 65
+ G
Sbjct: 455 KCG 457
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/50 (68%), Positives = 41/50 (82%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLR 282
NK FVD VSSG E GILLD++NFYAEQGGQIYDEGF++ +DE T V ++
Sbjct: 515 NKTFVDEVSSGEEVGILLDQTNFYAEQGGQIYDEGFLVKTDDEDTEVRIK 564
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHS 115
+ +P A +TSVEFCGGTHL H+ DF I+SEEAIAKG IV+ G + T
Sbjct: 709 EKDPLGPAATQTSVEFCGGTHLHYTKHMEDFIIASEEAIAKGIRRIVALTGPEATKAQKK 768
Query: 116 GSI 118
++
Sbjct: 769 AAV 771
>gi|26336489|dbj|BAC31927.1| unnamed protein product [Mus musculus]
Length = 968
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 123/223 (55%), Gaps = 32/223 (14%)
Query: 245 EAGILLDKSNFYAEQG-GQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDK 303
E G+++D + F E+ Q+ +G G DE ++ Y + + + G EA K
Sbjct: 431 EKGLVVDMNGFEEERRLAQLKSQG--KGAGDEDLIMLDIYAIEELRA--KGLEATDDSPK 486
Query: 304 SNFYAEQGGQIYDE-------GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 356
N+ ++ G E K FVD V +G E G++LDK+ FYAEQGGQIYDEG
Sbjct: 487 YNYQSDSSGSYVFECTVATVLALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIYDEG 546
Query: 357 FMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGD 416
+++ V+D S+ + +F++ N + + V + T+ L+VGD
Sbjct: 547 YLVKVDDSSEDKT-------------------EFTVKNAQVRGGYVLHIGTIYGNLKVGD 587
Query: 417 KLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+++L ID RRRP+MSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 588 QVRLFIDEPRRRPVMSNHTATHILNFALRSVLG-EADQKGSLV 629
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ K +PGD AW LYDTYGFPVDLT L+ EEKGL VDM +E+ ++ AQ
Sbjct: 395 RKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMNGFEEERRLAQ 449
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L K FVD V +G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 507 LALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPCGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|74196486|dbj|BAE34378.1| unnamed protein product [Mus musculus]
Length = 968
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 124/229 (54%), Gaps = 32/229 (13%)
Query: 245 EAGILLDKSNFYAEQG-GQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDK 303
E G+++D + F E+ Q+ +G G DE ++ Y + + + G EA K
Sbjct: 431 EKGLVVDMNGFEEERRLAQLKSQG--KGAGDEDLIMLDIYAIEELRA--KGLEATDDSPK 486
Query: 304 SNFYAEQGGQIYDE-------GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 356
N+ ++ G E K FVD V +G E G++LDK+ FYAEQGGQIYDEG
Sbjct: 487 YNYQSDSSGSYVFECTVATVLALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIYDEG 546
Query: 357 FMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGD 416
+++ V+D S+ + +F++ N + + V + T+ L+VGD
Sbjct: 547 YLVKVDDSSEDKT-------------------EFTVKNAQVRGGYVLHIGTIYGNLKVGD 587
Query: 417 KLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
+++L ID RRRP+MSNHTATHILN ALR VLG EADQKGSLV L
Sbjct: 588 QVRLFIDEPRRRPVMSNHTATHILNFALRSVLG-EADQKGSLVAPDRLR 635
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ K +PGD AW LYDTYGFPVDLT L+ EEKGL VDM +E+ ++ AQ
Sbjct: 395 RKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMNGFEEERRLAQ 449
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L K FVD V +G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 507 LALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPCGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|37903407|gb|AAP57355.1| Alanyl-tRNA synthase [Mus musculus]
Length = 968
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 123/223 (55%), Gaps = 32/223 (14%)
Query: 245 EAGILLDKSNFYAEQG-GQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDK 303
E G+++D + F E+ Q+ +G G DE ++ Y + + + G EA K
Sbjct: 431 EKGLVVDMNGFEEERRLAQLKSQG--KGAGDEDLIMLDIYAIEELRA--KGLEATDDSPK 486
Query: 304 SNFYAEQGGQIYDE-------GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 356
N+ ++ G E K FVD V +G E G++LDK+ FYAEQGGQIYDEG
Sbjct: 487 YNYQSDSSGSYVFECTVATVLALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIYDEG 546
Query: 357 FMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGD 416
+++ V+D S+ + +F++ N + + V + T+ L+VGD
Sbjct: 547 YLVKVDDSSEDKT-------------------EFTVKNAQVRGGYVLHIGTIYGNLKVGD 587
Query: 417 KLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+++L ID RRRP+MSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 588 QVRLFIDEPRRRPVMSNHTATHILNFALRSVLG-EADQKGSLV 629
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ K +PGD AW LYDTYGFPVDLT L+ EEKGL VDM +E+ ++ AQ
Sbjct: 395 RKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMNGFEEERRLAQ 449
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L K FVD V +G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 507 LALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPCGPAGSLTSVEFCGGTHLRNSSHEGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|297284439|ref|XP_002808351.1| PREDICTED: LOW QUALITY PROTEIN: alanyl-tRNA synthetase,
cytoplasmic-like [Macaca mulatta]
Length = 967
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 92/143 (64%), Gaps = 20/143 (13%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D S+ +
Sbjct: 512 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKT------------- 558
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+F++ N + + V + T+ L+VGD+++L ID RRRPIMSNHTATHILN
Sbjct: 559 ------EFTVKNAQVRGGYVLHIGTIYGDLKVGDQVRLFIDEPRRRPIMSNHTATHILNF 612
Query: 443 ALRFVLGPEADQKGSLVYRYHLH 465
ALR VLG EADQKGSLV L
Sbjct: 613 ALRSVLG-EADQKGSLVAPDRLR 634
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 394 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 448
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 35/41 (85%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 512 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 552
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 708 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 759
>gi|384945526|gb|AFI36368.1| alanyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
Length = 968
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 91/137 (66%), Gaps = 20/137 (14%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D S+ +
Sbjct: 513 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKT------------- 559
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+F++ N + + V + T+ L+VGD+++L ID RRRPIMSNHTATHILN
Sbjct: 560 ------EFTVKNAQVRGGYVLHIGTIYGDLKVGDQVRLFIDEPRRRPIMSNHTATHILNF 613
Query: 443 ALRFVLGPEADQKGSLV 459
ALR VLG EADQKGSLV
Sbjct: 614 ALRSVLG-EADQKGSLV 629
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 35/41 (85%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 513 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|383410179|gb|AFH28303.1| alanyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
Length = 968
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 91/137 (66%), Gaps = 20/137 (14%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D S+ +
Sbjct: 513 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKT------------- 559
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+F++ N + + V + T+ L+VGD+++L ID RRRPIMSNHTATHILN
Sbjct: 560 ------EFTVKNAQVRGGYVLHIGTIYGDLKVGDQVRLFIDEPRRRPIMSNHTATHILNF 613
Query: 443 ALRFVLGPEADQKGSLV 459
ALR VLG EADQKGSLV
Sbjct: 614 ALRSVLG-EADQKGSLV 629
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 35/41 (85%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 513 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|355710377|gb|EHH31841.1| hypothetical protein EGK_12990 [Macaca mulatta]
Length = 992
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 91/137 (66%), Gaps = 20/137 (14%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D S+ +
Sbjct: 521 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKT------------- 567
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+F++ N + + V + T+ L+VGD+++L ID RRRPIMSNHTATHILN
Sbjct: 568 ------EFTVKNAQVRGGYVLHIGTIYGDLKVGDQVRLFIDEPRRRPIMSNHTATHILNF 621
Query: 443 ALRFVLGPEADQKGSLV 459
ALR VLG EADQKGSLV
Sbjct: 622 ALRSVLG-EADQKGSLV 637
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 403 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 457
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 35/41 (85%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 521 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 561
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 717 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 768
>gi|380810080|gb|AFE76915.1| alanyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
Length = 968
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 91/137 (66%), Gaps = 20/137 (14%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D S+ +
Sbjct: 513 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKT------------- 559
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+F++ N + + V + T+ L+VGD+++L ID RRRPIMSNHTATHILN
Sbjct: 560 ------EFTVKNAQVRGGYVLHIGTIYGDLKVGDQVRLFIDEPRRRPIMSNHTATHILNF 613
Query: 443 ALRFVLGPEADQKGSLV 459
ALR VLG EADQKGSLV
Sbjct: 614 ALRSVLG-EADQKGSLV 629
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 36/47 (76%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
+ K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 507 MALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|402912107|ref|XP_003918629.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Papio anubis]
Length = 968
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 91/137 (66%), Gaps = 20/137 (14%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D S+ +
Sbjct: 513 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDKT------------- 559
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+F++ N + + V + T+ L+VGD+++L ID RRRPIMSNHTATHILN
Sbjct: 560 ------EFTVKNAQVRGGYVLHIGTIYGDLKVGDQVRLFIDEPRRRPIMSNHTATHILNF 613
Query: 443 ALRFVLGPEADQKGSLV 459
ALR VLG EADQKGSLV
Sbjct: 614 ALRSVLG-EADQKGSLV 629
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 35/41 (85%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 513 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGTEA 760
>gi|332020821|gb|EGI61219.1| Alanyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
Length = 1010
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 90/138 (65%), Gaps = 23/138 (16%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K FVD VSSG E GILLD++NFYAEQGGQIYDEGF++ V+DE+
Sbjct: 553 KTFVDEVSSGEEVGILLDRTNFYAEQGGQIYDEGFLVKVDDETT---------------- 596
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+ + N++ + V + T+ TLR GDK+ ++DT RRR +M+NH+ATH+LN
Sbjct: 597 ------EIRIKNVQIRAGYVLHIGTVGEGTLRKGDKVHTNVDTERRRFVMANHSATHVLN 650
Query: 442 HALRFVLGPEADQKGSLV 459
+ALR VLG +ADQKGSLV
Sbjct: 651 YALRKVLGTKADQKGSLV 668
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 52/63 (82%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+TIAKL + +PGDVAWRLYDTYGFP+DLTQLM EEKGL +D+ YE++KK+AQ ++
Sbjct: 432 RTIAKLESADTVPGDVAWRLYDTYGFPIDLTQLMTEEKGLKIDIAGYEESKKQAQLISQN 491
Query: 63 QAG 65
+AG
Sbjct: 492 KAG 494
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/45 (75%), Positives = 38/45 (84%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
GTV+ LR K FVD VSSG E GILLD++NFYAEQGGQIYDEGF+
Sbjct: 544 GTVIALRRAKTFVDEVSSGEEVGILLDRTNFYAEQGGQIYDEGFL 588
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 41/49 (83%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLR 282
K FVD VSSG E GILLD++NFYAEQGGQIYDEGF++ V+DE T + ++
Sbjct: 553 KTFVDEVSSGEEVGILLDRTNFYAEQGGQIYDEGFLVKVDDETTEIRIK 601
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHS 115
+ +P S A +ETSVEFCGGTHL H+G+F I SE+AIAKG IV+ G + +
Sbjct: 746 EKDPLSTAALETSVEFCGGTHLHYTSHIGNFTIVSEDAIAKGIRRIVALTGPEAAKALRT 805
Query: 116 G 116
G
Sbjct: 806 G 806
>gi|432114146|gb|ELK36179.1| Alanyl-tRNA synthetase, cytoplasmic [Myotis davidii]
Length = 991
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 92/138 (66%), Gaps = 20/138 (14%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
+K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D S+ +
Sbjct: 525 DKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDK------------- 571
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++ N + + V + T+ L+VGD+++L ID RRRP+MSNHTATHILN
Sbjct: 572 ------TEFTVKNTQVRGGYVLHIGTIYGNLKVGDQVRLFIDEPRRRPVMSNHTATHILN 625
Query: 442 HALRFVLGPEADQKGSLV 459
ALR VLG EADQ+GSLV
Sbjct: 626 FALRSVLG-EADQRGSLV 642
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 408 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 462
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 37/47 (78%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
+ +K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 520 MALRRDKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 566
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I SEEAIAKG IV+ G++
Sbjct: 722 DPSGPAGSLTSVEFCGGTHLQNSSHAGAFVIVSEEAIAKGIRRIVAVTGAEA 773
>gi|126305114|ref|XP_001362507.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic [Monodelphis
domestica]
Length = 968
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 93/143 (65%), Gaps = 20/143 (13%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+ K FVD VS+G E G++LDK+ FYAEQGGQIYDEG+++ +D S+ +
Sbjct: 507 KALRREKMFVDEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKEDDSSEDKT------- 559
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+F++ + + + V + T+ +LRVGD+++L+ID RRRP+MSNHTA
Sbjct: 560 ------------EFTVKDAQVRGGYVLHIGTVYGSLRVGDRVRLYIDEPRRRPVMSNHTA 607
Query: 437 THILNHALRFVLGPEADQKGSLV 459
THILN ALR VLG EADQ+GSLV
Sbjct: 608 THILNFALRSVLG-EADQRGSLV 629
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ K +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/50 (60%), Positives = 38/50 (76%), Gaps = 2/50 (4%)
Query: 225 VKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
VK LR K FVD VS+G E G++LDK+ FYAEQGGQIYDEG+++ +D
Sbjct: 506 VKALR--REKMFVDEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKEDD 553
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 55 KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
K +P AG TSVEFCGGTHL + H G I SEEAIAKG +V+ G
Sbjct: 705 KLLDDPSGPAGSLTSVEFCGGTHLQNSSHAGALVIVSEEAIAKGIRRVVAVTG 757
>gi|301791808|ref|XP_002930871.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Ailuropoda
melanoleuca]
Length = 968
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 96/158 (60%), Gaps = 20/158 (12%)
Query: 302 DKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 361
D S YA + +K FV+ V +G E G++LDK+ FYAEQGGQIYDEG+++ V
Sbjct: 492 DSSGSYAFESTVATVMALRRDKMFVEEVCTGQECGVVLDKTCFYAEQGGQIYDEGYLVKV 551
Query: 362 NDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLH 421
D S+ + +F++ N + + V + T+ +LRVGD+++L
Sbjct: 552 EDNSEDKT-------------------EFTVKNAQVRGGYVLHIGTIYGSLRVGDQVRLF 592
Query: 422 IDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
ID RRRP+MSNHTATHILN ALR VLG EADQ+GSLV
Sbjct: 593 IDEPRRRPVMSNHTATHILNFALRSVLG-EADQRGSLV 629
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ K +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
+ +K FV+ V +G E G++LDK+ FYAEQGGQIYDEG+++ V D
Sbjct: 507 MALRRDKMFVEEVCTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVED 553
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F + SEEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLQNSSHAGAFVLVSEEAIAKGIRRIVAVTGAEA 760
>gi|281350877|gb|EFB26461.1| hypothetical protein PANDA_021488 [Ailuropoda melanoleuca]
Length = 976
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/158 (44%), Positives = 96/158 (60%), Gaps = 20/158 (12%)
Query: 302 DKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 361
D S YA + +K FV+ V +G E G++LDK+ FYAEQGGQIYDEG+++ V
Sbjct: 492 DSSGSYAFESTVATVMALRRDKMFVEEVCTGQECGVVLDKTCFYAEQGGQIYDEGYLVKV 551
Query: 362 NDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLH 421
D S+ + +F++ N + + V + T+ +LRVGD+++L
Sbjct: 552 EDNSEDKT-------------------EFTVKNAQVRGGYVLHIGTIYGSLRVGDQVRLF 592
Query: 422 IDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
ID RRRP+MSNHTATHILN ALR VLG EADQ+GSLV
Sbjct: 593 IDEPRRRPVMSNHTATHILNFALRSVLG-EADQRGSLV 629
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ K +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
+ +K FV+ V +G E G++LDK+ FYAEQGGQIYDEG+++ V D
Sbjct: 507 MALRRDKMFVEEVCTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVED 553
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F + SEEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLQNSSHAGAFVLVSEEAIAKGIRRIVAVTGAEA 760
>gi|395836962|ref|XP_003791415.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Otolemur garnettii]
Length = 968
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/239 (36%), Positives = 126/239 (52%), Gaps = 54/239 (22%)
Query: 247 GILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLD---- 302
G +D + AE+ G + D M G +E + L+ + +G E I+LD
Sbjct: 419 GFPVDLTGLIAEEKGLVVD---MDGFEEERKLAQLKSQGK-----GAGGEDLIMLDIYAI 470
Query: 303 ---------------KSNFYAEQGGQIYDEGFMSN-------KQFVDSVSSGTEAGILLD 340
K N++++ G E ++ K FV+ VS+G E G++LD
Sbjct: 471 EELRAKGLEVTDDSPKYNYHSDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLD 530
Query: 341 KSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKK 400
K+ FYAEQGGQIYDEG+++ V+D S+ + +F++ N + +
Sbjct: 531 KTCFYAEQGGQIYDEGYLVKVDDSSEDKT-------------------EFTVKNAQVRGG 571
Query: 401 LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
V + T+ L+VGD+++L ID RRRP+MSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 572 YVLHIGTIYGDLKVGDQVRLFIDEPRRRPVMSNHTATHILNFALRSVLG-EADQKGSLV 629
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LGE+K +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGETKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 35/41 (85%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 513 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 55 KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
K +P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 705 KLLDDPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|403298315|ref|XP_003939968.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Saimiri boliviensis
boliviensis]
Length = 968
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/164 (43%), Positives = 101/164 (61%), Gaps = 27/164 (16%)
Query: 303 KSNFYAEQGGQIYDEGFMSN-------KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDE 355
K N++++ G E ++ K FV+ VS+G E G++LDK+ FYAEQGGQIYDE
Sbjct: 486 KYNYHSDSSGNYVFENTVATVLALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDE 545
Query: 356 GFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVG 415
G+++ V+D S+ + +F++ N + + V + T+ L+VG
Sbjct: 546 GYLVKVDDSSEDKT-------------------EFTVKNAQVRGGYVLHIGTIYGDLKVG 586
Query: 416 DKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
D+++L ID RRRP+MSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 587 DQVQLFIDEPRRRPVMSNHTATHILNFALRSVLG-EADQKGSLV 629
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKILSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLLVDMDGFEEERKLAQ 449
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 507 LALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLQNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|209862801|ref|NP_001093987.1| alanine--tRNA ligase, cytoplasmic [Rattus norvegicus]
gi|261260086|sp|P50475.3|SYAC_RAT RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|149038198|gb|EDL92558.1| alanyl-tRNA synthetase [Rattus norvegicus]
Length = 968
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 102/175 (58%), Gaps = 27/175 (15%)
Query: 292 SSGTEAGILLDKSNFYAEQGGQIYDE-------GFMSNKQFVDSVSSGTEAGILLDKSNF 344
+ G EA K N++++ G E K FVD V +G E G++LDK+ F
Sbjct: 475 AKGLEATDDSPKYNYHSDSSGSYVFECTVATVLALRREKMFVDEVVTGQECGVVLDKTCF 534
Query: 345 YAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKL 404
YAEQGGQI+DEG+++ V+D S+ + +F++ N + + V
Sbjct: 535 YAEQGGQIFDEGYLVKVDDSSEDKT-------------------EFTVKNAQVRGGYVLH 575
Query: 405 LHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+ T+ LRVGD+++L ID RRRP+MSNHTATHILN ALR VLG +ADQKGSLV
Sbjct: 576 IGTIYGNLRVGDQVRLFIDEPRRRPVMSNHTATHILNFALRSVLG-DADQKGSLV 629
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 42/55 (76%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ + +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDCQTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L K FVD V +G E G++LDK+ FYAEQGGQI+DEG+++ V+D
Sbjct: 507 LALRREKMFVDEVVTGQECGVVLDKTCFYAEQGGQIFDEGYLVKVDD 553
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|340718527|ref|XP_003397717.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Bombus
terrestris]
Length = 1193
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 87/138 (63%), Gaps = 23/138 (16%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K FVD VSSG E GILLD++NFYAEQGGQIYDEGF++ ++D+
Sbjct: 516 KTFVDEVSSGEEVGILLDQTNFYAEQGGQIYDEGFLVKIDDDDT---------------- 559
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+ + N++ + V + T+ L+ GDK+ L+IDT RRR IMSNHTATH LN
Sbjct: 560 ------EVRIKNVQVRGGYVLHIGTVGQGKLKKGDKVFLNIDTTRRRLIMSNHTATHALN 613
Query: 442 HALRFVLGPEADQKGSLV 459
HALR VLG E DQKGSLV
Sbjct: 614 HALRKVLGTEVDQKGSLV 631
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 46/63 (73%), Positives = 53/63 (84%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+TIAKL S VLPGDVAWRLYDTYGFPVDLTQLM EEKGL VD+ YE+AKK+AQ +S
Sbjct: 395 RTIAKLESSNVLPGDVAWRLYDTYGFPVDLTQLMAEEKGLKVDIIGYEEAKKQAQLISQS 454
Query: 63 QAG 65
++G
Sbjct: 455 KSG 457
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 41/49 (83%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLR 282
K FVD VSSG E GILLD++NFYAEQGGQIYDEGF++ ++D+ T V ++
Sbjct: 516 KTFVDEVSSGEEVGILLDQTNFYAEQGGQIYDEGFLVKIDDDDTEVRIK 564
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHS 115
+ +P S A ++TSVEFCGGTHL H+GDF I+SEEAIAKG IV+ G + T
Sbjct: 709 EKDPLSSAALQTSVEFCGGTHLHCTEHIGDFVIASEEAIAKGIRRIVALTGPEATKAQKK 768
Query: 116 GSI 118
SI
Sbjct: 769 ASI 771
>gi|350409807|ref|XP_003488850.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Bombus
impatiens]
Length = 1194
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 87/138 (63%), Gaps = 23/138 (16%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K FVD VSSG E GILLD++NFYAEQGGQIYDEGF++ ++D+
Sbjct: 516 KTFVDEVSSGEEVGILLDQTNFYAEQGGQIYDEGFLVKIDDDDT---------------- 559
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+ + N++ + V + T+ L+ GDK+ L+IDT RRR IMSNHTATH LN
Sbjct: 560 ------EVRIKNVQIRGGYVLHIGTVGQGKLKKGDKVFLNIDTTRRRLIMSNHTATHALN 613
Query: 442 HALRFVLGPEADQKGSLV 459
HALR VLG E DQKGSLV
Sbjct: 614 HALRKVLGTEVDQKGSLV 631
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 54/63 (85%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+TIAKLG S VLPGDVAWRLYDTYGFPVDLTQLM EEKGL VD+ YE+AKK+AQ +S
Sbjct: 395 RTIAKLGSSNVLPGDVAWRLYDTYGFPVDLTQLMAEEKGLKVDIIGYEEAKKQAQLISQS 454
Query: 63 QAG 65
++G
Sbjct: 455 KSG 457
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 41/49 (83%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLR 282
K FVD VSSG E GILLD++NFYAEQGGQIYDEGF++ ++D+ T V ++
Sbjct: 516 KTFVDEVSSGEEVGILLDQTNFYAEQGGQIYDEGFLVKIDDDDTEVRIK 564
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHS 115
+ +P S A ++TSVEFCGGTHL H+GDF I+SEEAIAKG IV+ G + T
Sbjct: 709 EKDPLSSAALQTSVEFCGGTHLHYTEHIGDFVIASEEAIAKGIRRIVALTGPEATKAQKK 768
Query: 116 GSI 118
SI
Sbjct: 769 ASI 771
>gi|307187766|gb|EFN72738.1| Alanyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
Length = 968
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 89/138 (64%), Gaps = 23/138 (16%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K FVD V+SG E GILLDK+NFYAEQGGQIYDEGF++ V+DE+
Sbjct: 512 KTFVDQVTSGEEVGILLDKTNFYAEQGGQIYDEGFLVKVDDEAT---------------- 555
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+ + N++ + V + T+ TLR GDK+ ++DTARRR +M+NH+ATH LN
Sbjct: 556 ------EIRVKNVQVRAGYVLHIGTVGEGTLRKGDKVYTNVDTARRRLVMANHSATHALN 609
Query: 442 HALRFVLGPEADQKGSLV 459
+ALR VLG ADQKGSLV
Sbjct: 610 YALRKVLGTGADQKGSLV 627
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 52/63 (82%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+TIAKL S +PGDVAWRLYDTYGFPVDLTQLM EEKGL +D+ YE++KK+AQ ++
Sbjct: 391 RTIAKLESSDTVPGDVAWRLYDTYGFPVDLTQLMTEEKGLKIDIAGYEESKKQAQLISQN 450
Query: 63 QAG 65
+AG
Sbjct: 451 KAG 453
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 41/49 (83%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLR 282
K FVD V+SG E GILLDK+NFYAEQGGQIYDEGF++ V+DE T + ++
Sbjct: 512 KTFVDQVTSGEEVGILLDKTNFYAEQGGQIYDEGFLVKVDDEATEIRVK 560
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 15/87 (17%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + G+ VD + P S A +ETSVEFCGGTHL H
Sbjct: 686 ETYPDPVRVISM-----GIPVD---------DLEKNPLSTAALETSVEFCGGTHLHYTGH 731
Query: 84 VGDFCISSEEAIAKG-SNIVSYCGSKG 109
+GDF I+SEEAIAKG IV+ G +
Sbjct: 732 IGDFIIASEEAIAKGIRRIVALTGPEA 758
>gi|426382771|ref|XP_004057974.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Gorilla gorilla
gorilla]
Length = 902
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 90/137 (65%), Gaps = 20/137 (14%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D S+ +
Sbjct: 447 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSSEDK-------------- 492
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+F++ N + + V + T+ L+VGD++ L ID RRRPIMSNHTATHILN
Sbjct: 493 -----TEFTVKNAQVRAGYVLHIGTIYGDLKVGDQVWLFIDEPRRRPIMSNHTATHILNF 547
Query: 443 ALRFVLGPEADQKGSLV 459
ALR VLG EADQKGSLV
Sbjct: 548 ALRSVLG-EADQKGSLV 563
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 35/41 (85%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 447 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 487
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 643 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 694
>gi|354503320|ref|XP_003513729.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Cricetulus
griseus]
gi|344253408|gb|EGW09512.1| Alanyl-tRNA synthetase, cytoplasmic [Cricetulus griseus]
Length = 968
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 102/175 (58%), Gaps = 27/175 (15%)
Query: 292 SSGTEAGILLDKSNFYAEQGGQIYDE-------GFMSNKQFVDSVSSGTEAGILLDKSNF 344
+ G EA K N++++ G E K FV+ V +G E G++LDK+ F
Sbjct: 475 AKGLEATDDSPKYNYHSDSNGSYVFECTVATVLALRREKMFVEEVVTGQECGVVLDKTCF 534
Query: 345 YAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKL 404
YAEQGGQIYDEG+++ V+D S+ + +F++ N + + V
Sbjct: 535 YAEQGGQIYDEGYLVKVDDSSEDKT-------------------EFTVKNTQVRGGYVLH 575
Query: 405 LHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+ T+ L+VGD+++L ID RRRP+MSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 576 IGTIYGNLKVGDQVRLFIDEPRRRPVMSNHTATHILNFALRSVLG-EADQKGSLV 629
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ K +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L K FV+ V +G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 507 LALRREKMFVEEVVTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|307210107|gb|EFN86804.1| Alanyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
Length = 972
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 88/138 (63%), Gaps = 23/138 (16%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K FVD VSSG E GILLD++NFYAEQGGQIYDEGF++ V+DE+
Sbjct: 516 KTFVDQVSSGEEVGILLDRTNFYAEQGGQIYDEGFLVKVDDEAT---------------- 559
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+ + N++ + V + T+ L+ GD++ ++DT RRR +M+NH+ATH LN
Sbjct: 560 ------EIRIKNVQVRAGYVLHIGTVGEGILKKGDQVHANVDTTRRRLVMANHSATHALN 613
Query: 442 HALRFVLGPEADQKGSLV 459
HALR VLG EADQKGSLV
Sbjct: 614 HALRKVLGTEADQKGSLV 631
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 51/63 (80%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+TIAKL + +PGDVAWRLYDTYGFP+DLTQLM EEKGL +DM YE++KK+AQ ++
Sbjct: 395 RTIAKLESNDTVPGDVAWRLYDTYGFPIDLTQLMTEEKGLKIDMAGYEESKKQAQLISQN 454
Query: 63 QAG 65
+ G
Sbjct: 455 KVG 457
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/49 (67%), Positives = 41/49 (83%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLR 282
K FVD VSSG E GILLD++NFYAEQGGQIYDEGF++ V+DE T + ++
Sbjct: 516 KTFVDQVSSGEEVGILLDRTNFYAEQGGQIYDEGFLVKVDDEATEIRIK 564
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ P S +TSVEFCGGTHL H+GDF I+SEEAIAKG IV+ G +
Sbjct: 709 EKNPLSPVATQTSVEFCGGTHLHYTGHIGDFIIASEEAIAKGIRRIVALTGPEA 762
>gi|194386694|dbj|BAG61157.1| unnamed protein product [Homo sapiens]
Length = 992
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 95/159 (59%), Gaps = 20/159 (12%)
Query: 301 LDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 360
LD S Y + K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++
Sbjct: 499 LDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVK 558
Query: 361 VNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKL 420
V+D S+ + +F++ N + + V + T+ L+VGD++ L
Sbjct: 559 VDDSSEDK-------------------TEFTVKNAQVRGGYVLHIGTIYGDLKVGDQVWL 599
Query: 421 HIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
ID RRRPIMSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 600 FIDEPRRRPIMSNHTATHILNFALRSVLG-EADQKGSLV 637
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 403 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 457
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 35/41 (85%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 521 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 561
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 717 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 768
>gi|410254294|gb|JAA15114.1| alanyl-tRNA synthetase [Pan troglodytes]
Length = 968
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 95/159 (59%), Gaps = 20/159 (12%)
Query: 301 LDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 360
LD S Y + K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++
Sbjct: 491 LDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVK 550
Query: 361 VNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKL 420
V+D S+ + +F++ N + + V + T+ L+VGD++ L
Sbjct: 551 VDDSSEDK-------------------TEFTVKNAQVRGGYVLHIGTIYGDLKVGDQVWL 591
Query: 421 HIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
ID RRRPIMSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 592 FIDEPRRRPIMSNHTATHILNFALRSVLG-EADQKGSLV 629
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 35/41 (85%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 513 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|81871231|sp|Q8CFX8.1|SYAC_MESAU RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|26522952|dbj|BAC44844.1| alanyl trna synthetase [Mesocricetus auratus]
Length = 968
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 102/175 (58%), Gaps = 27/175 (15%)
Query: 292 SSGTEAGILLDKSNFYAEQGGQIYDE-------GFMSNKQFVDSVSSGTEAGILLDKSNF 344
+ G EA K N++++ G E K FV+ V +G E G++LDK+ F
Sbjct: 475 AKGLEATDDSPKYNYHSDSSGAYVFECTVATVLALRREKMFVEEVVTGQECGVVLDKTCF 534
Query: 345 YAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKL 404
YAEQGGQIYDEG+++ V+D S+ + +F++ N + + V
Sbjct: 535 YAEQGGQIYDEGYLVKVDDSSEDKT-------------------EFTVKNAQVRGGYVLH 575
Query: 405 LHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+ T+ L+VGD+++L ID RRRP+MSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 576 IGTIYGNLKVGDQVRLFIDEPRRRPVMSNHTATHILNFALRSVLG-EADQKGSLV 629
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ K +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDCKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 35/47 (74%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L K FV+ V +G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 507 LALRREKMFVEEVVTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLQNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|296231556|ref|XP_002761188.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Callithrix jacchus]
Length = 968
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 91/137 (66%), Gaps = 20/137 (14%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D ++ +
Sbjct: 513 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDDSNEDKT------------- 559
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+F++ N + + V + T+ L+VGD+++L ID RRRP+MSNHTATHILN
Sbjct: 560 ------EFTVKNAQVRGGYVLHIGTIYGDLKVGDQVRLFIDEPRRRPVMSNHTATHILNF 613
Query: 443 ALRFVLGPEADQKGSLV 459
ALR VLG EADQKGSLV
Sbjct: 614 ALRSVLG-EADQKGSLV 629
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKILSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLLVDMDGFEEERKLAQ 449
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 507 LALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLQNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|1015321|dbj|BAA06808.1| alanyl-tRNA synthetase [Homo sapiens]
Length = 968
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 95/159 (59%), Gaps = 20/159 (12%)
Query: 301 LDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 360
LD S Y + K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++
Sbjct: 491 LDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVK 550
Query: 361 VNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKL 420
V+D S+ + +F++ N + + V + T+ L+VGD++ L
Sbjct: 551 VDDSSEDK-------------------TEFTVKNAQVRGGYVLHIGTIYGDLKVGDQVWL 591
Query: 421 HIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
ID RRRPIMSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 592 FIDEPRRRPIMSNHTATHILNFALRSVLG-EADQKGSLV 629
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 35/41 (85%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 513 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|332846336|ref|XP_001169520.2| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase, cytoplasmic
isoform 2 [Pan troglodytes]
Length = 968
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 95/159 (59%), Gaps = 20/159 (12%)
Query: 301 LDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 360
LD S Y + K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++
Sbjct: 491 LDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVK 550
Query: 361 VNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKL 420
V+D S+ + +F++ N + + V + T+ L+VGD++ L
Sbjct: 551 VDDSSEDK-------------------TEFTVKNAQVRGGYVLHIGTIYGDLKVGDQVWL 591
Query: 421 HIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
ID RRRPIMSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 592 FIDEPRRRPIMSNHTATHILNFALRSVLG-EADQKGSLV 629
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 35/41 (85%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 513 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|397479616|ref|XP_003811107.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Pan paniscus]
gi|410222120|gb|JAA08279.1| alanyl-tRNA synthetase [Pan troglodytes]
gi|410355185|gb|JAA44196.1| alanyl-tRNA synthetase [Pan troglodytes]
Length = 968
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 95/159 (59%), Gaps = 20/159 (12%)
Query: 301 LDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 360
LD S Y + K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++
Sbjct: 491 LDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVK 550
Query: 361 VNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKL 420
V+D S+ + +F++ N + + V + T+ L+VGD++ L
Sbjct: 551 VDDSSEDK-------------------TEFTVKNAQVRGGYVLHIGTIYGDLKVGDQVWL 591
Query: 421 HIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
ID RRRPIMSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 592 FIDEPRRRPIMSNHTATHILNFALRSVLG-EADQKGSLV 629
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 35/41 (85%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 513 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|197099554|ref|NP_001125391.1| alanine--tRNA ligase, cytoplasmic [Pongo abelii]
gi|75042108|sp|Q5RC02.1|SYAC_PONAB RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|55727911|emb|CAH90708.1| hypothetical protein [Pongo abelii]
Length = 968
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 95/159 (59%), Gaps = 20/159 (12%)
Query: 301 LDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 360
LD S Y + K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++
Sbjct: 491 LDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVK 550
Query: 361 VNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKL 420
V+D S+ + +F++ N + + V + T+ L+VGD++ L
Sbjct: 551 VDDSSEDK-------------------TEFTVKNAQVRGGYVLHIGTIYGDLKVGDQVWL 591
Query: 421 HIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
ID RRRPIMSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 592 FIDEPRRRPIMSNHTATHILNFALRSVLG-EADQKGSLV 629
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 35/41 (85%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 513 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|112984224|ref|NP_001037452.1| alanine--tRNA ligase, cytoplasmic [Bombyx mori]
gi|135089|sp|P21894.1|SYAC_BOMMO RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|155955|gb|AAA27821.1| transfer RNA-Ala synthetase [Bombyx mori]
Length = 967
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 62/142 (43%), Positives = 90/142 (63%), Gaps = 22/142 (15%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
NK+FV +SSG E G++LD+++FYAEQGGQI+DEG+M+ ++DE+
Sbjct: 511 ALRKNKEFVSEISSGQECGVILDRTSFYAEQGGQIFDEGYMVKIDDET------------ 558
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
++F++ N++ K V + L+VGD L LHIDT RRR +M+NHT T
Sbjct: 559 ----------VEFTVKNVQVKGGYVLHAGKVEGILKVGDTLSLHIDTERRRLVMNNHTGT 608
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H+LN+ LR VLG ++DQ+GSLV
Sbjct: 609 HVLNNVLRKVLGNDSDQRGSLV 630
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/57 (71%), Positives = 49/57 (85%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ +TI KL SK LPGDVAWRLYDTYGFP+DLTQLM EEKGL+VDME YE ++K++Q
Sbjct: 393 LYRTIEKLNNSKTLPGDVAWRLYDTYGFPIDLTQLMCEEKGLNVDMEGYEKSRKESQ 449
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 38/43 (88%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
NK+FV +SSG E G++LD+++FYAEQGGQI+DEG+M+ ++DE
Sbjct: 515 NKEFVSEISSGQECGVILDRTSFYAEQGGQIFDEGYMVKIDDE 557
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 60 PESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGSI 118
P++ G ETSVEFCGG+HL H+G++ I SEE IAKG IV+ G + + S+
Sbjct: 711 PDAPTGFETSVEFCGGSHLHRTSHIGEYVIVSEEGIAKGIRRIVAVTGPEAIKAINKLSV 770
Query: 119 NDEMVN 124
+ VN
Sbjct: 771 LENEVN 776
>gi|109148542|ref|NP_001596.2| alanine--tRNA ligase, cytoplasmic [Homo sapiens]
gi|115502460|sp|P49588.2|SYAC_HUMAN RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS; AltName:
Full=Renal carcinoma antigen NY-REN-42
gi|15079238|gb|AAH11451.1| Alanyl-tRNA synthetase [Homo sapiens]
gi|119572224|gb|EAW51839.1| alanyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
gi|123981462|gb|ABM82560.1| alanyl-tRNA synthetase [synthetic construct]
gi|123996297|gb|ABM85750.1| alanyl-tRNA synthetase [synthetic construct]
Length = 968
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 95/159 (59%), Gaps = 20/159 (12%)
Query: 301 LDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 360
LD S Y + K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++
Sbjct: 491 LDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVK 550
Query: 361 VNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKL 420
V+D S+ + +F++ N + + V + T+ L+VGD++ L
Sbjct: 551 VDDSSEDK-------------------TEFTVKNAQVRGGYVLHIGTIYGDLKVGDQVWL 591
Query: 421 HIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
ID RRRPIMSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 592 FIDEPRRRPIMSNHTATHILNFALRSVLG-EADQKGSLV 629
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 35/41 (85%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 513 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|62897207|dbj|BAD96544.1| alanyl-tRNA synthetase variant [Homo sapiens]
Length = 968
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 73/159 (45%), Positives = 95/159 (59%), Gaps = 20/159 (12%)
Query: 301 LDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 360
LD S Y + K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++
Sbjct: 491 LDSSGSYVFENTVATVMALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVK 550
Query: 361 VNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKL 420
V+D S+ + +F++ N + + V + T+ L+VGD++ L
Sbjct: 551 VDDSSEDK-------------------TEFTVKNAQVRGGYVLHIGTIYGDLKVGDQVWL 591
Query: 421 HIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
ID RRRPIMSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 592 FIDEPRRRPIMSNHTATHILNFALRSVLG-EADQKGSLV 629
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 35/41 (85%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 513 KMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 760
>gi|350584879|ref|XP_003126924.3| PREDICTED: alanyl-tRNA synthetase, cytoplasmic [Sus scrofa]
Length = 956
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 72/173 (41%), Positives = 103/173 (59%), Gaps = 27/173 (15%)
Query: 294 GTEAGILLDKSNFYAEQGGQIYDE-------GFMSNKQFVDSVSSGTEAGILLDKSNFYA 346
G EA K N++++ G E ++ FV+ V +G E G++LDK+ FYA
Sbjct: 477 GLEATDDSPKYNYHSDSSGSYVFESAVATVMALRRDRMFVEEVCTGQECGVVLDKTCFYA 536
Query: 347 EQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLH 406
EQGGQIYDEG+++ V+D S+ + +F++ N + + V +
Sbjct: 537 EQGGQIYDEGYLVKVDDSSEDKT-------------------EFTVKNAQVRGGYVLHIG 577
Query: 407 TLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
T+ +L+VGD+++L ID RRRP+MSNHTATHILN ALR VLG EADQ+GSLV
Sbjct: 578 TIYGSLKVGDQVRLFIDEPRRRPVMSNHTATHILNFALRSVLG-EADQRGSLV 629
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 35/42 (83%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
++ FV+ V +G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 512 DRMFVEEVCTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCI 89
+P AG TSVEFCGGTHL + H G F +
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLQNSSHAGAFVM 739
>gi|224064089|ref|XP_002186563.1| PREDICTED: alanine--tRNA ligase, cytoplasmic [Taeniopygia guttata]
Length = 968
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 92/137 (67%), Gaps = 20/137 (14%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K+FV+ VS+G E GI+LD++ FYAEQGGQIYD+G+M+ +D + +
Sbjct: 513 KKFVEEVSTGQECGIVLDRTCFYAEQGGQIYDQGYMVKDDDSREDKT------------- 559
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+F++ N++ + V + TL +L+VGD++ L ID ARRRP+MSNHTATHILN
Sbjct: 560 ------EFTVKNVQVRGGYVLHIGTLYGSLKVGDQVHLTIDEARRRPVMSNHTATHILNF 613
Query: 443 ALRFVLGPEADQKGSLV 459
ALR VLG EADQ+GSLV
Sbjct: 614 ALRSVLG-EADQRGSLV 629
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SKV+PGD AW LYDTYGFP DLT L+ EEKGL VDME +E+ +K AQ
Sbjct: 395 RKIQSLGDSKVIPGDTAWLLYDTYGFPADLTGLIAEEKGLVVDMEGFEEERKNAQ 449
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
Query: 225 VKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
VK +R K+FV+ VS+G E GI+LD++ FYAEQGGQIYD+G+M+ +D
Sbjct: 506 VKAIR--REKKFVEEVSTGQECGIVLDRTCFYAEQGGQIYDQGYMVKDDD 553
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 47/91 (51%), Gaps = 11/91 (12%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
++P G TS+EFCGGTHL + H G F I SEEAIAKG IV+ G++
Sbjct: 708 ADPSGPGGSITSIEFCGGTHLQNSSHAGSFVIVSEEAIAKGIRRIVAVTGAEAR------ 761
Query: 117 SINDEMVNKYPSLYRLFRTVHKQKYVQDALN 147
+ + K SL +L + + VQ A N
Sbjct: 762 ----KALRKVDSLRKLLSALEAKVKVQTAPN 788
>gi|348503890|ref|XP_003439495.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Oreochromis
niloticus]
Length = 966
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 64/142 (45%), Positives = 92/142 (64%), Gaps = 20/142 (14%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
++ F D V++G E G++LD+++FYAEQGGQ +DEG+++ +D ++ +
Sbjct: 508 ALRRDRAFCDEVTTGQECGVVLDQTSFYAEQGGQTFDEGYLLREDDSTEDRM-------- 559
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
+FS+ N + + V + T+ TL+VGD++ LH+D ARRRPIMSNHTAT
Sbjct: 560 -----------EFSVKNTQVRGGYVLHVGTVYGTLKVGDRVTLHVDEARRRPIMSNHTAT 608
Query: 438 HILNHALRFVLGPEADQKGSLV 459
HILN ALR VLG EADQ+GSLV
Sbjct: 609 HILNFALRGVLG-EADQRGSLV 629
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 41/55 (74%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I L ++K +PGD AW LYDTYGFP+DLT L+ EEKG+ VD+ +E+ KK AQ
Sbjct: 395 RKIMSLADTKTIPGDTAWLLYDTYGFPLDLTSLIAEEKGMEVDLAGFEEEKKAAQ 449
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 53/106 (50%), Gaps = 18/106 (16%)
Query: 6 AKLGESKVLPGDVAWRLYD-TYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
A L E+K + G A ++D TY PV + + + L D P S A
Sbjct: 671 ATLAEAKAIQGLRA--VFDETYPDPVRVVSIGIPVPELLAD--------------PNSAA 714
Query: 65 GMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
G TS+EFCGGTHL + H F I SEEAIAKG IV+ G++
Sbjct: 715 GSLTSIEFCGGTHLQNSGHAAPFVIVSEEAIAKGIRRIVAVTGTEA 760
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 35/47 (74%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L ++ F D V++G E G++LD+++FYAEQGGQ +DEG+++ +D
Sbjct: 507 LALRRDRAFCDEVTTGQECGVVLDQTSFYAEQGGQTFDEGYLLREDD 553
>gi|432862331|ref|XP_004069802.1| PREDICTED: alanine--tRNA ligase, cytoplasmic-like [Oryzias latipes]
Length = 966
Score = 124 bits (312), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 90/142 (63%), Gaps = 20/142 (14%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
++ F + V++G E G++LD+++FYAEQGGQ YDEG+M+ ND + +
Sbjct: 508 ALRCDRAFCEEVTTGQECGVVLDQTSFYAEQGGQTYDEGYMLRENDNTDDRM-------- 559
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
+F++ N + + V + T+ TLRVGD++ L ID ARRRPIMSNHTAT
Sbjct: 560 -----------EFTVKNTQVRGGYVLHIGTVYGTLRVGDRVSLCIDEARRRPIMSNHTAT 608
Query: 438 HILNHALRFVLGPEADQKGSLV 459
HILN ALR VLG EADQ+GSLV
Sbjct: 609 HILNFALRGVLG-EADQRGSLV 629
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/55 (60%), Positives = 41/55 (74%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ K LPGD AW LYDTYGFP+DLT L+ EEKG+ VD+ +E+ KK AQ
Sbjct: 395 RKIMSLGDCKTLPGDTAWLLYDTYGFPLDLTSLIAEEKGMEVDLAGFEEEKKAAQ 449
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 36/45 (80%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
TV+ LR ++ F + V++G E G++LD+++FYAEQGGQ YDEG+M
Sbjct: 504 ATVLALRCDRAFCEEVTTGQECGVVLDQTSFYAEQGGQTYDEGYM 548
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L ++ F + V++G E G++LD+++FYAEQGGQ YDEG+M+ ND
Sbjct: 507 LALRCDRAFCEEVTTGQECGVVLDQTSFYAEQGGQTYDEGYMLREND 553
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 57/106 (53%), Gaps = 18/106 (16%)
Query: 6 AKLGESKVLPGDVAWRLYD-TYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
A L E+K + G A ++D TY PV + + G+ V E+ +D P S A
Sbjct: 671 ASLAEAKAIQGLRA--VFDETYPDPVRVVSI-----GVPV-QELLDD--------PNSPA 714
Query: 65 GMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
G TS+EFCGGTHL + H F I SEEAIAKG IV+ G++
Sbjct: 715 GSLTSIEFCGGTHLQNSSHAAPFVIVSEEAIAKGIRRIVAVTGAEA 760
>gi|155371881|ref|NP_001094545.1| alanyl-tRNA synthetase, cytoplasmic [Bos taurus]
gi|151553989|gb|AAI48084.1| AARS protein [Bos taurus]
gi|296478238|tpg|DAA20353.1| TPA: alanyl-tRNA synthetase [Bos taurus]
Length = 968
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 91/138 (65%), Gaps = 20/138 (14%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
++ FV+ S+G E G++LDK+ FYAEQGGQ YDEG+++ V+D S+ +
Sbjct: 512 DRMFVEEASTGQECGVVLDKTCFYAEQGGQTYDEGYLVKVDDSSEDKT------------ 559
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++ N + + V + TL +L+VGD+++L ID RRRP+MSNHTATHILN
Sbjct: 560 -------EFTVKNTQVRGGYVLHIGTLYGSLKVGDQVRLFIDEPRRRPVMSNHTATHILN 612
Query: 442 HALRFVLGPEADQKGSLV 459
ALR VLG EADQ+GSLV
Sbjct: 613 FALRSVLG-EADQRGSLV 629
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +++ +K AQ
Sbjct: 395 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTALIAEEKGLVVDMDGFDEERKLAQ 449
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
+ ++ FV+ S+G E G++LDK+ FYAEQGGQ YDEG+++ V+D
Sbjct: 507 MALRRDRMFVEEASTGQECGVVLDKTCFYAEQGGQTYDEGYLVKVDD 553
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I SEEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLQNSSHAGAFVIVSEEAIAKGIRRIVAVTGAEA 760
>gi|115432192|gb|ABI97370.1| AlaRS [Bos taurus]
Length = 869
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 91/142 (64%), Gaps = 20/142 (14%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
++ FV+ S+G E G++LDK+ FYAEQGGQ YDEG+++ V+D S+ +
Sbjct: 508 ALRRDRMFVEEASTGQECGVVLDKTCFYAEQGGQTYDEGYLVKVDDSSEDKT-------- 559
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
+F++ N + + V + TL +L+VGD+++L ID RRRP+MSNHTAT
Sbjct: 560 -----------EFTVKNTQVRGGYVLHIGTLYGSLKVGDQVRLFIDEPRRRPVMSNHTAT 608
Query: 438 HILNHALRFVLGPEADQKGSLV 459
HILN ALR VLG EADQ+GSLV
Sbjct: 609 HILNFALRSVLG-EADQRGSLV 629
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +++ +K AQ
Sbjct: 395 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTALIAEEKGLVVDMDGFDEERKLAQ 449
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
+ ++ FV+ S+G E G++LDK+ FYAEQGGQ YDEG+++ V+D
Sbjct: 507 MALRRDRMFVEEASTGQECGVVLDKTCFYAEQGGQTYDEGYLVKVDD 553
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I SEEAIAKG IV+ G++
Sbjct: 709 DPSGPAGSLTSVEFCGGTHLQNSSHAGAFVIVSEEAIAKGIRRIVAVTGAEA 760
>gi|440907203|gb|ELR57374.1| Alanyl-tRNA synthetase, cytoplasmic [Bos grunniens mutus]
Length = 1002
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 91/138 (65%), Gaps = 20/138 (14%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
++ FV+ S+G E G++LDK+ FYAEQGGQ YDEG+++ V+D S+ +
Sbjct: 531 DRMFVEEASTGQECGVVLDKTCFYAEQGGQTYDEGYLVKVDDSSEDKT------------ 578
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++ N + + V + TL +L+VGD+++L ID RRRP+MSNHTATHILN
Sbjct: 579 -------EFTVKNTQVRGGYVLHIGTLYGSLKVGDQVRLFIDEPRRRPVMSNHTATHILN 631
Query: 442 HALRFVLGPEADQKGSLV 459
ALR VLG EADQ+GSLV
Sbjct: 632 FALRSVLG-EADQRGSLV 648
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +++ +K AQ
Sbjct: 414 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTALIAEEKGLVVDMDGFDEERKLAQ 468
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 35/47 (74%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
+ ++ FV+ S+G E G++LDK+ FYAEQGGQ YDEG+++ V+D
Sbjct: 526 MALRRDRMFVEEASTGQECGVVLDKTCFYAEQGGQTYDEGYLVKVDD 572
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + HVG F I SEEAIAKG IV+ G++
Sbjct: 728 DPSGPAGSLTSVEFCGGTHLQNSSHVGAFVIVSEEAIAKGIRRIVAVTGAEA 779
>gi|149640708|ref|XP_001506178.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic isoform 1
[Ornithorhynchus anatinus]
Length = 968
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/149 (44%), Positives = 93/149 (62%), Gaps = 20/149 (13%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+ K FVD VS+G E G++LDK+ FYAEQGGQI+DEG+++ +D S+ +
Sbjct: 507 KALRREKTFVDEVSTGQECGVVLDKTCFYAEQGGQIFDEGYLVKDDDGSEDKT------- 559
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+F++ N++ + V + T+ L+VGD+++L ID RRRP+MSNHTA
Sbjct: 560 ------------EFTVKNVQVRGGYVLHIGTVYGNLKVGDQVRLFIDEPRRRPVMSNHTA 607
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
THILN ALR VLG EADQ+GSLV L
Sbjct: 608 THILNFALRSVLG-EADQRGSLVAPDRLR 635
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 42/55 (76%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+ K +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDGKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 2/50 (4%)
Query: 225 VKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
VK LR K FVD VS+G E G++LDK+ FYAEQGGQI+DEG+++ +D
Sbjct: 506 VKALR--REKTFVDEVSTGQECGVVLDKTCFYAEQGGQIFDEGYLVKDDD 553
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P S AG TSVEFCGGTHL + H G F I SEEAIAKG IV+ G++
Sbjct: 709 DPSSPAGSLTSVEFCGGTHLRNSGHAGAFVIVSEEAIAKGIRRIVAVTGTEA 760
>gi|327281303|ref|XP_003225388.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Anolis
carolinensis]
Length = 969
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/158 (45%), Positives = 97/158 (61%), Gaps = 19/158 (12%)
Query: 302 DKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 361
D S Y Q + K FV+ VS+G E GI+LD++ FYAEQGGQIYDEG+++
Sbjct: 492 DPSGTYEFQSPVATVKALRREKVFVEEVSTGQECGIVLDQTCFYAEQGGQIYDEGYLVKE 551
Query: 362 NDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLH 421
DE GS+ +F++ N++ + V + T+ +L+VGD ++L+
Sbjct: 552 EDE--------------GSEDKT----EFTVKNVQVRGGYVLHVGTVYGSLKVGDTVRLY 593
Query: 422 IDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
ID RRRP+MSNHTATHILN ALR VLG EADQ+GSLV
Sbjct: 594 IDEPRRRPVMSNHTATHILNFALRAVLG-EADQRGSLV 630
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/63 (58%), Positives = 48/63 (76%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ I LG++KV+PGD AW LYDTYGFPVDLT L+ EEKGL VDME +E+ +K AQ + +
Sbjct: 395 RKIQSLGDNKVIPGDTAWLLYDTYGFPVDLTGLIAEEKGLKVDMEGFEEERKAAQLKSQG 454
Query: 63 QAG 65
+ G
Sbjct: 455 KGG 457
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 40/53 (75%), Gaps = 2/53 (3%)
Query: 225 VKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT 277
VK LR K FV+ VS+G E GI+LD++ FYAEQGGQIYDEG+++ DEG+
Sbjct: 506 VKALR--REKVFVEEVSTGQECGIVLDQTCFYAEQGGQIYDEGYLVKEEDEGS 556
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 49/91 (53%), Gaps = 11/91 (12%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
++P + AG TSVEFCGGTHL + H G F I SEEAIAKG IV+ G++
Sbjct: 709 ADPSNAAGAITSVEFCGGTHLQNSSHAGHFVIVSEEAIAKGIRRIVAVTGAEAQ------ 762
Query: 117 SINDEMVNKYPSLYRLFRTVHKQKYVQDALN 147
+ + K SL +L + + VQ A N
Sbjct: 763 ----KALRKVESLKKLLADLEAKVKVQTAPN 789
>gi|57524852|ref|NP_001005836.1| alanyl-tRNA synthetase, cytoplasmic [Gallus gallus]
gi|53131091|emb|CAG31790.1| hypothetical protein RCJMB04_11d4 [Gallus gallus]
Length = 913
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 92/143 (64%), Gaps = 20/143 (13%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+ K+FV+ VS+G E GI+LD++ FYAEQGGQIYD+G+M+ +D + +
Sbjct: 507 KAIRREKKFVEEVSTGQECGIVLDRTCFYAEQGGQIYDQGYMVKDDDSKEDKT------- 559
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+F++ N++ + V + TL +L+VGD++ L ID RRRP+MSNHTA
Sbjct: 560 ------------EFTVKNVQVRGGYVLHIGTLYGSLKVGDQVHLSIDETRRRPVMSNHTA 607
Query: 437 THILNHALRFVLGPEADQKGSLV 459
THILN ALR VLG EADQ+GSLV
Sbjct: 608 THILNFALRSVLG-EADQRGSLV 629
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I +G+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDME +E+ +K AQ
Sbjct: 395 RKIQSMGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMEGFEEERKNAQ 449
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
Query: 225 VKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
VK +R K+FV+ VS+G E GI+LD++ FYAEQGGQIYD+G+M+ +D
Sbjct: 506 VKAIR--REKKFVEEVSTGQECGIVLDRTCFYAEQGGQIYDQGYMVKDDD 553
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 11/91 (12%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
++P AG TS+EFCGGTHL + H G F I SEEAIAKG IV+ G++
Sbjct: 708 ADPSGPAGSITSIEFCGGTHLQNSGHAGPFVIVSEEAIAKGIRRIVAVTGAEAR------ 761
Query: 117 SINDEMVNKYPSLYRLFRTVHKQKYVQDALN 147
+ + K SL ++ + + VQ A N
Sbjct: 762 ----KALRKVESLKKVLSALDAKVKVQTAPN 788
>gi|291229512|ref|XP_002734712.1| PREDICTED: alanyl-tRNA synthetase-like [Saccoglossus kowalevskii]
Length = 974
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 71/147 (48%), Positives = 90/147 (61%), Gaps = 28/147 (19%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
+KQFV V +G E G+LLDK+ FYAEQGGQI+DEGFM N+
Sbjct: 512 ALRKDKQFVSEVDNGDECGMLLDKTCFYAEQGGQIWDEGFMEKENNPD------------ 559
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHT-----LRVGDKLKLHIDTARRRPIMS 432
++F ++N++ K + + LS L+VGDK+KL+ID ARRRPIMS
Sbjct: 560 ----------IEFKVTNVQVKGGYILHIGKLSAVDSEGKLKVGDKMKLYIDEARRRPIMS 609
Query: 433 NHTATHILNHALRFVLGPEADQKGSLV 459
NHT TH+LN+ALR VLG EADQKGSLV
Sbjct: 610 NHTGTHMLNYALRKVLG-EADQKGSLV 635
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/44 (75%), Positives = 37/44 (84%), Gaps = 1/44 (2%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDM 46
+TI KL E+KVLPG AW LYDTYGFPVDLTQLM EE GL++DM
Sbjct: 396 RTINKL-ETKVLPGKAAWLLYDTYGFPVDLTQLMAEENGLNIDM 438
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 52/98 (53%), Gaps = 3/98 (3%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHS 115
+++P AG TS+EFCGGTHL + H+G F I +EEAIAKG IV+ G +
Sbjct: 713 EADPSGPAGATTSIEFCGGTHLLNSGHIGPFVIVTEEAIAKGIRRIVAITGDDAQKAINR 772
Query: 116 GSINDEMVNKYPSLYRLFRTVHKQKYVQDALNVSCLSF 153
+ +E ++K + T KQ Y+ L+ +S
Sbjct: 773 ADMLEEEIDKLTQKIKDNST--KQVYMPKELSKEIVSI 808
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/37 (70%), Positives = 31/37 (83%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
+KQFV V +G E G+LLDK+ FYAEQGGQI+DEGFM
Sbjct: 516 DKQFVSEVDNGDECGMLLDKTCFYAEQGGQIWDEGFM 552
>gi|322783659|gb|EFZ10997.1| hypothetical protein SINV_01057 [Solenopsis invicta]
Length = 952
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 88/138 (63%), Gaps = 23/138 (16%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K FVD VSSG E GILLD++NFYAEQGGQI+DEGF++ V+DE+
Sbjct: 516 KAFVDEVSSGEEVGILLDRTNFYAEQGGQIFDEGFLVKVDDEAT---------------- 559
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+ + N++ + V + T+ LR GDK+ ++DT RRR +M+NH+ATH LN
Sbjct: 560 ------EIRVKNVQVRAGYVLHIGTVGEGKLRKGDKVHTNVDTKRRRFVMANHSATHALN 613
Query: 442 HALRFVLGPEADQKGSLV 459
+ALR VLG EADQKGSLV
Sbjct: 614 YALRKVLGTEADQKGSLV 631
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 53/63 (84%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+TIAKL + V+PGDVAWRLYDTYGFP+DLTQLM EEKGL +DM YE+AKK+AQ ++
Sbjct: 395 RTIAKLESTNVVPGDVAWRLYDTYGFPIDLTQLMTEEKGLKIDMTGYEEAKKQAQLISQN 454
Query: 63 QAG 65
+AG
Sbjct: 455 KAG 457
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 41/49 (83%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLR 282
K FVD VSSG E GILLD++NFYAEQGGQI+DEGF++ V+DE T + ++
Sbjct: 516 KAFVDEVSSGEEVGILLDRTNFYAEQGGQIFDEGFLVKVDDEATEIRVK 564
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 15/88 (17%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + G+SV+ K +S+P S+A +ETSVEFCGGTHL H
Sbjct: 690 ETYPDPVRVVSM-----GVSVE---------KLESDPLSKAALETSVEFCGGTHLHYTAH 735
Query: 84 VGDFCISSEEAIAKG-SNIVSYCGSKGT 110
+GDF I+SE+AIAKG IV+ G + T
Sbjct: 736 IGDFVIASEDAIAKGIRRIVALTGPEAT 763
>gi|417413283|gb|JAA52978.1| Putative alanyl-trna synthetase, partial [Desmodus rotundus]
Length = 973
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 91/137 (66%), Gaps = 20/137 (14%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K+FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ ++D + +
Sbjct: 518 KRFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKIDDSMEDKT------------- 564
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+F++ N + + V + T+ L+VGD+++L ID RRRP+MSNHTATHILN
Sbjct: 565 ------EFTVKNTQVRGGYVLHVGTIYGHLKVGDQVRLFIDEPRRRPVMSNHTATHILNF 618
Query: 443 ALRFVLGPEADQKGSLV 459
ALR VLG EADQ+GSLV
Sbjct: 619 ALRSVLG-EADQRGSLV 634
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL+VDM+ +E+ ++ AQ
Sbjct: 400 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLAVDMDGFEEERRLAQ 454
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 36/41 (87%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
K+FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ ++D
Sbjct: 518 KRFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKIDD 558
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I SEEAIAKG IV+ G++
Sbjct: 714 DPSGPAGSLTSVEFCGGTHLQNSSHAGAFVIVSEEAIAKGIRRIVAVTGAEA 765
>gi|326927213|ref|XP_003209787.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Meleagris
gallopavo]
Length = 968
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 91/137 (66%), Gaps = 20/137 (14%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K+FV+ VS+G E GI+LD++ FYAEQGGQIYD+G+M+ +D + +
Sbjct: 513 KKFVEEVSTGQECGIVLDRTCFYAEQGGQIYDQGYMVKDDDSREDKT------------- 559
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+F++ N++ + V + TL +L+VGD++ L ID RRRP+MSNHTATHILN
Sbjct: 560 ------EFTVKNVQVRGGYVLHIGTLYGSLKVGDQVHLSIDETRRRPVMSNHTATHILNF 613
Query: 443 ALRFVLGPEADQKGSLV 459
ALR VLG EADQ+GSLV
Sbjct: 614 ALRSVLG-EADQRGSLV 629
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I +G+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDME +E+ +K AQ
Sbjct: 395 RKIQSMGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMEGFEEERKNAQ 449
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
Query: 225 VKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
VK +R K+FV+ VS+G E GI+LD++ FYAEQGGQIYD+G+M+ +D
Sbjct: 506 VKAIR--REKKFVEEVSTGQECGIVLDRTCFYAEQGGQIYDQGYMVKDDD 553
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 48/91 (52%), Gaps = 11/91 (12%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
++P AG TS+EFCGGTHL + H G F I SEEAIAKG IV+ G++
Sbjct: 708 ADPSGPAGSITSIEFCGGTHLQNSGHAGPFVIVSEEAIAKGIRRIVAVTGAEAR------ 761
Query: 117 SINDEMVNKYPSLYRLFRTVHKQKYVQDALN 147
+ + K SL +L + + VQ A N
Sbjct: 762 ----KALRKVESLKKLLSALDAKVKVQTAPN 788
>gi|449268815|gb|EMC79652.1| Alanyl-tRNA synthetase, cytoplasmic [Columba livia]
Length = 946
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/137 (48%), Positives = 90/137 (65%), Gaps = 20/137 (14%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K+FV+ VS+G E GI+LD++ FYAEQGGQIYDEG+M+ +D + +
Sbjct: 491 KKFVEEVSTGQECGIVLDRTCFYAEQGGQIYDEGYMVKEDDGREDKT------------- 537
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+F++ N++ + V + TL L+VGD++ L ID RRRP+MSNHTATHILN
Sbjct: 538 ------EFTVKNVQVRGGYVLHIGTLYGNLKVGDQVCLSIDETRRRPVMSNHTATHILNF 591
Query: 443 ALRFVLGPEADQKGSLV 459
ALR VLG EADQ+GSLV
Sbjct: 592 ALRSVLG-EADQRGSLV 607
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 39/50 (78%), Gaps = 2/50 (4%)
Query: 225 VKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
VK +R K+FV+ VS+G E GI+LD++ FYAEQGGQIYDEG+M+ +D
Sbjct: 484 VKAIR--REKKFVEEVSTGQECGIVLDRTCFYAEQGGQIYDEGYMVKEDD 531
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 48/91 (52%), Gaps = 11/91 (12%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
++P AG TSVEFCGGTHL + H G F I SEEAIAKG IV+ G++
Sbjct: 686 ADPSGPAGSVTSVEFCGGTHLQNSSHAGPFVIVSEEAIAKGIRRIVAVTGAEAR------ 739
Query: 117 SINDEMVNKYPSLYRLFRTVHKQKYVQDALN 147
+ + K SL +L + + VQ A N
Sbjct: 740 ----KALRKVDSLKKLLSALEAKVKVQTAPN 766
>gi|213512300|ref|NP_001133550.1| Alanyl-tRNA synthetase, cytoplasmic [Salmo salar]
gi|209154450|gb|ACI33457.1| Alanyl-tRNA synthetase, cytoplasmic [Salmo salar]
Length = 967
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/223 (37%), Positives = 127/223 (56%), Gaps = 32/223 (14%)
Query: 245 EAGILLDKSNFYAEQ-GGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDK 303
E G+++D + F E+ Q+ +G G DE ++ Y + D + G A K
Sbjct: 431 ERGMMVDVAAFEEEKKAAQVKSQG--KGSGDEDHIMLDIYAIE--DLRNKGIAATDDTLK 486
Query: 304 SNFYAEQGGQ-IYDEG------FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 356
++ A+ G+ ++++ + FV+ V++G E G+LLDK++FYAEQGGQ +DEG
Sbjct: 487 YSYSADDSGKYVFEQAVGTVLALRRERAFVEEVTTGQECGVLLDKTSFYAEQGGQSFDEG 546
Query: 357 FMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGD 416
+M+ +D ++ ++F++ N + + V + T+ TL+VGD
Sbjct: 547 YMLREDD-------------------SVDDRMEFTVKNTQVRGGYVLHVGTVYGTLKVGD 587
Query: 417 KLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+ LH+D ARRRPIMSNHTATHILN ALR VLG EADQ+GSLV
Sbjct: 588 HVILHVDEARRRPIMSNHTATHILNFALREVLG-EADQRGSLV 629
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 42/55 (76%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFP+DLT L+ EE+G+ VD+ +E+ KK AQ
Sbjct: 395 RKIQSLGDSKTIPGDTAWLLYDTYGFPLDLTALIAEERGMMVDVAAFEEEKKAAQ 449
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L + FV+ V++G E G+LLDK++FYAEQGGQ +DEG+M+ +D
Sbjct: 507 LALRRERAFVEEVTTGQECGVLLDKTSFYAEQGGQSFDEGYMLREDD 553
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
++P S AG TS+EFCGGTHL + H F I SEEAIAKG IV+ G++
Sbjct: 708 ADPSSTAGSLTSIEFCGGTHLRNSGHAAPFVIVSEEAIAKGIRRIVAVTGAEA 760
>gi|321477760|gb|EFX88718.1| hypothetical protein DAPPUDRAFT_191289 [Daphnia pulex]
Length = 987
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 66/137 (48%), Positives = 86/137 (62%), Gaps = 22/137 (16%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K F + VSSG E GILLD+++FYAE GGQ YDEGF+ + DE
Sbjct: 517 KAFHEEVSSGVECGILLDRTSFYAESGGQAYDEGFITKIGDEGT---------------- 560
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+F++ N++ + V L + TLRVGD++KL ID +RRR IMSNHT TH+LN+
Sbjct: 561 ------EFTVKNVQVRGGYVIHLGNVEGTLRVGDEVKLSIDQSRRRLIMSNHTGTHVLNY 614
Query: 443 ALRFVLGPEADQKGSLV 459
ALR V+G EADQ+GSLV
Sbjct: 615 ALRQVVGNEADQRGSLV 631
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/55 (76%), Positives = 47/55 (85%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+TI+KL LPGDVAWRLYDTYGFPVDLTQLM EEKGLS+DM YE+AKK+AQ
Sbjct: 396 RTISKLNGQTTLPGDVAWRLYDTYGFPVDLTQLMSEEKGLSIDMVAYEEAKKQAQ 450
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT 277
K + + K F + VSSG E GILLD+++FYAE GGQ YDEGF+ + DEGT
Sbjct: 509 KVIAIRFQKAFHEEVSSGVECGILLDRTSFYAESGGQAYDEGFITKIGDEGT 560
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGT 110
+++P + AG TS+EFCGGTH+ + H+GDF IS+EEAIAKG IV+ G + +
Sbjct: 709 EADPANPAGNSTSIEFCGGTHVKRSGHIGDFVISAEEAIAKGIRRIVAITGPEAS 763
>gi|242012157|ref|XP_002426803.1| Alanyl-tRNA synthetase, putative [Pediculus humanus corporis]
gi|212510999|gb|EEB14065.1| Alanyl-tRNA synthetase, putative [Pediculus humanus corporis]
Length = 983
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 92/158 (58%), Gaps = 22/158 (13%)
Query: 302 DKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 361
DK+ Y Q + K+FVDS++SG + GILLD++ FYAEQGGQI+DEG+MI
Sbjct: 495 DKNAEYEFQKCEAKITAIRHKKKFVDSINSGEKCGILLDRTLFYAEQGGQIFDEGYMIKK 554
Query: 362 NDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLH 421
NDE+ ++FS+ N++ K V T + GD + LH
Sbjct: 555 NDEN----------------------VEFSIYNVQVKAGYVLHFGTTEGVFKKGDTVVLH 592
Query: 422 IDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+DTARRR +M+NHT THILN ALR VLG +QKGSLV
Sbjct: 593 LDTARRRLVMNNHTGTHILNFALREVLGSGCEQKGSLV 630
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 46/55 (83%), Positives = 52/55 (94%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+TIAK+G+SKVLPGDVAWRLYDTYGFPVDLTQLM EEKGLSVDM YE+A+K+AQ
Sbjct: 395 RTIAKIGKSKVLPGDVAWRLYDTYGFPVDLTQLMAEEKGLSVDMTGYEEARKQAQ 449
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 42/55 (76%), Gaps = 1/55 (1%)
Query: 232 YNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQ 286
+ K+FVDS++SG + GILLD++ FYAEQGGQI+DEG+MI NDE + YN Q
Sbjct: 514 HKKKFVDSINSGEKCGILLDRTLFYAEQGGQIFDEGYMIKKNDENVEFSI-YNVQ 567
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
+ P S GM EFCGGTHL + HVGDF ISSEEAIAKG IV+ G + +
Sbjct: 709 ANPSSSLGMSVPAEFCGGTHLHRSGHVGDFVISSEEAIAKGIRRIVALTGPEASKALKKA 768
Query: 117 SINDEMVNK 125
+I + VN+
Sbjct: 769 AILENEVNE 777
>gi|410925952|ref|XP_003976443.1| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase,
cytoplasmic-like [Takifugu rubripes]
Length = 966
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 91/138 (65%), Gaps = 20/138 (14%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
++ F VSSG E G+LLD+++FYAEQGGQ +DEGFM+ +D + G +
Sbjct: 512 DRTFCTEVSSGQECGVLLDQTSFYAEQGGQTFDEGFMVREDDST-------------GDR 558
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
++F++ N + + V + T+ TL++GD++ LH+D ARRR +MSNHTATHILN
Sbjct: 559 ------MEFTVKNTQVRGGYVLHVGTVYGTLKLGDQVTLHVDEARRRLVMSNHTATHILN 612
Query: 442 HALRFVLGPEADQKGSLV 459
ALR VLG EADQ+GSLV
Sbjct: 613 FALRGVLG-EADQRGSLV 629
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LGESK +PGD AW LYDTYGFP+DLT L+ EEKGL+VD+ +E+ KK AQ
Sbjct: 395 RKIISLGESKTVPGDTAWLLYDTYGFPLDLTSLIAEEKGLNVDLAAFEEEKKAAQ 449
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L ++ F VSSG E G+LLD+++FYAEQGGQ +DEGFM+ +D
Sbjct: 507 LALRRDRTFCTEVSSGQECGVLLDQTSFYAEQGGQTFDEGFMVREDD 553
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 57/103 (55%), Gaps = 18/103 (17%)
Query: 6 AKLGESKVLPGDVAWRLYD-TYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
A L ++K + G A ++D TY PV + + G+ V+ E+ +D P+S A
Sbjct: 671 APLAQAKAIQGLRA--VFDETYPDPVRVVSI-----GIPVE-ELLKD--------PDSTA 714
Query: 65 GMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
G TS+EFCGGTHL + H F I SEEAIAKG IV+ G
Sbjct: 715 GSLTSIEFCGGTHLQNSAHAAPFVIVSEEAIAKGIRRIVAVTG 757
>gi|444722321|gb|ELW63019.1| Alanyl-tRNA synthetase, cytoplasmic [Tupaia chinensis]
Length = 1050
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 89/143 (62%), Gaps = 20/143 (13%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K FV V +G E G++LD++ FYAEQGGQ YDEG+++ +D S+ +
Sbjct: 512 KMFVAEVFTGQECGVVLDRTCFYAEQGGQTYDEGYLVKADDSSEDKT------------- 558
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+F++ N++ + V + T+ L+VGD+++L ID RRRP+MSNHTATHILN
Sbjct: 559 ------EFTVKNVQVRGGYVLHVGTIYGHLKVGDQVRLFIDEPRRRPVMSNHTATHILNF 612
Query: 443 ALRFVLGPEADQKGSLVYRYHLH 465
ALR VLG EADQKGSLV L
Sbjct: 613 ALRCVLG-EADQKGSLVAPDRLR 634
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 394 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 448
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 785 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 836
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 32/47 (68%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
L K FV V +G E G++LD++ FYAEQGGQ YDEG+++ +D
Sbjct: 506 LALRREKMFVAEVFTGQECGVVLDRTCFYAEQGGQTYDEGYLVKADD 552
>gi|345495930|ref|XP_003427602.1| PREDICTED: LOW QUALITY PROTEIN: alanyl-tRNA synthetase,
cytoplasmic-like [Nasonia vitripennis]
Length = 1152
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/135 (47%), Positives = 84/135 (62%), Gaps = 23/135 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
+K FVD V SG E G+LLD++NFYAEQGGQIYDEGF++ V+DES
Sbjct: 510 ALRKDKTFVDEVKSGDEVGVLLDQTNFYAEQGGQIYDEGFLVKVDDEST----------- 558
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+ ++N++ + V + T+ TL+ GDKL L++DT+RRR IMSNHTA
Sbjct: 559 -----------EIRVTNVQVRGGYVLHIGTVGEGTLKKGDKLYLNVDTSRRRLIMSNHTA 607
Query: 437 THILNHALRFVLGPE 451
TH LNHALR VLG +
Sbjct: 608 THALNHALRSVLGTD 622
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 52/63 (82%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+TIAKL +KV+PGDVAWRLYDTYGFPVDLTQLM EEKGL++D+ YE+AKK A +
Sbjct: 394 RTIAKLESTKVVPGDVAWRLYDTYGFPVDLTQLMAEEKGLTIDVAAYEEAKKLAIIASQG 453
Query: 63 QAG 65
+AG
Sbjct: 454 KAG 456
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 38/45 (84%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
GTV+ LR +K FVD V SG E G+LLD++NFYAEQGGQIYDEGF+
Sbjct: 506 GTVLALRKDKTFVDEVKSGDEVGVLLDQTNFYAEQGGQIYDEGFL 550
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 40/52 (76%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
L +K FVD V SG E G+LLD++NFYAEQGGQIYDEGF++ V+DE T +
Sbjct: 509 LALRKDKTFVDEVKSGDEVGVLLDQTNFYAEQGGQIYDEGFLVKVDDESTEI 560
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/55 (56%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGT 110
+ +P S AG +TSVEFCGGTHL H+GDF I+SEEAIAKG IV+ G + +
Sbjct: 680 EKDPLSPAGAKTSVEFCGGTHLHRTGHIGDFVIASEEAIAKGIRRIVALTGPEAS 734
>gi|328781428|ref|XP_395392.3| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Apis
mellifera]
Length = 1194
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 68/137 (49%), Positives = 85/137 (62%), Gaps = 21/137 (15%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K FVD VSSG E GILLD++NFYAEQGGQIYDEGF+ ++DE S V+++ +
Sbjct: 516 KTFVDEVSSGEEVGILLDQTNFYAEQGGQIYDEGFLTKIDDE-------DSEVHIKNVQV 568
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
L + + K KK DK+ +IDT RRR +MSNHTATH+LN+
Sbjct: 569 RGGYILHIGIVSQGKLKK--------------NDKVFSNIDTTRRRLLMSNHTATHVLNY 614
Query: 443 ALRFVLGPEADQKGSLV 459
ALR +LG E DQKGSLV
Sbjct: 615 ALREILGTEVDQKGSLV 631
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/63 (66%), Positives = 51/63 (80%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+TI KL S +LPGDVAWRLYDTYGFP DLTQLM EEKGL VD+ YE+AKK+AQ ++
Sbjct: 395 RTIVKLESSNILPGDVAWRLYDTYGFPFDLTQLMAEEKGLKVDVIGYEEAKKEAQLISQN 454
Query: 63 QAG 65
++G
Sbjct: 455 KSG 457
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/49 (65%), Positives = 40/49 (81%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLR 282
K FVD VSSG E GILLD++NFYAEQGGQIYDEGF+ ++DE + V ++
Sbjct: 516 KTFVDEVSSGEEVGILLDQTNFYAEQGGQIYDEGFLTKIDDEDSEVHIK 564
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 16/103 (15%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGME 67
LG +K + G A +TY PV + + G+ V ED +K P S ++
Sbjct: 675 LGLAKTIQGLRAM-FEETYPDPVRVVSI-----GIPV-----EDLEK----NPLSSDALK 719
Query: 68 TSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
TSVEFCGGTHL H+ +F I SEEAIAKG IV+ G +
Sbjct: 720 TSVEFCGGTHLHYTGHIKNFIIVSEEAIAKGIRRIVALTGPEA 762
>gi|189217804|ref|NP_001121342.1| alanyl-tRNA synthetase [Xenopus laevis]
gi|171846704|gb|AAI61712.1| LOC100158432 protein [Xenopus laevis]
Length = 968
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/137 (47%), Positives = 87/137 (63%), Gaps = 20/137 (14%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K FV+ S+G E G++LDK+ FYAEQGGQ YDEG+M+ + S+ +
Sbjct: 513 KMFVEEASTGQECGLVLDKTCFYAEQGGQTYDEGYMVKEEESSEDKT------------- 559
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+F++ N + + V + TL L+VGD++ L+ID +RRPIMSNHTATHILN
Sbjct: 560 ------EFTVRNTQVRGGYVLHVGTLYGNLKVGDQVHLYIDEPKRRPIMSNHTATHILNF 613
Query: 443 ALRFVLGPEADQKGSLV 459
ALR VLG EADQ+GSLV
Sbjct: 614 ALRSVLG-EADQRGSLV 629
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 44/55 (80%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LGE KV+PGD AW LYDTYGFPVDLT L+ EE+GL++DME +E+ +K AQ
Sbjct: 395 RKIQSLGEHKVIPGDTAWLLYDTYGFPVDLTSLIAEERGLTLDMESFEEERKAAQ 449
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
++P S AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 708 ADPSSPAGSVTSVEFCGGTHLKNSGHAGPFIIVTEEAIAKGIRRIVAVTGAEA 760
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 34/46 (73%), Gaps = 2/46 (4%)
Query: 225 VKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
VK +R K FV+ S+G E G++LDK+ FYAEQGGQ YDEG+M+
Sbjct: 506 VKAIR--REKMFVEEASTGQECGLVLDKTCFYAEQGGQTYDEGYMV 549
>gi|443730742|gb|ELU16117.1| hypothetical protein CAPTEDRAFT_155717 [Capitella teleta]
Length = 1188
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/143 (44%), Positives = 85/143 (59%), Gaps = 23/143 (16%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+ SNK FVD V+SG E G++LDK+ FYA QGGQ++DEGF++ V+DE
Sbjct: 510 KALRSNKTFVDQVTSGQEVGVVLDKTCFYATQGGQMFDEGFIVKVDDED----------- 558
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+ + +++ + V + + TL VGD ++L +D RRRPIM NHT
Sbjct: 559 -----------TELKVHDVQVRGGYVLHVGVVEGTLSVGDNVRLQVDVERRRPIMCNHTG 607
Query: 437 THILNHALRFVLGPEADQKGSLV 459
TH+LN ALR VLG ADQKGSLV
Sbjct: 608 THMLNFALRQVLG-SADQKGSLV 629
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 52/64 (81%), Gaps = 1/64 (1%)
Query: 3 QTIAKLGE-SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPE 61
+TI KLG K+LPGDVAWRLYDTYGFP+DLTQLMVEEK ++VD+ YE+ KK AQ + +
Sbjct: 397 RTINKLGSGCKMLPGDVAWRLYDTYGFPLDLTQLMVEEKNMTVDLAGYEECKKAAQIKSQ 456
Query: 62 SQAG 65
++G
Sbjct: 457 GKSG 460
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 41/53 (77%), Gaps = 2/53 (3%)
Query: 225 VKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT 277
VK LR NK FVD V+SG E G++LDK+ FYA QGGQ++DEGF++ V+DE T
Sbjct: 509 VKALR--SNKTFVDQVTSGQEVGVVLDKTCFYATQGGQMFDEGFIVKVDDEDT 559
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
TV LR NK FVD V+SG E G++LDK+ FYA QGGQ++DEGF+
Sbjct: 507 ATVKALRSNKTFVDQVTSGQEVGVVLDKTCFYATQGGQMFDEGFI 551
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
S+P+ AG TSVEFCGGTHL H+G I +EEAIAKG IV+ G + H
Sbjct: 708 SDPDGPAGSLTSVEFCGGTHLTRTGHIGHMAIIAEEAIAKGIRRIVAVTGHEAQKAVHRA 767
Query: 117 SINDEMVNKYPSLYRLFRTVHKQKYVQDALN 147
+ ++ + + R+ + + + Q LN
Sbjct: 768 DVLEKEIQDLKN--RMDQATSSKNFSQSELN 796
>gi|301604154|ref|XP_002931707.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Xenopus
(Silurana) tropicalis]
Length = 968
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/143 (44%), Positives = 89/143 (62%), Gaps = 20/143 (13%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+ +K FV+ S+G E G++LDK+ FYAEQGGQ YDEG+M+ + S+ +
Sbjct: 507 KAIRRDKMFVEEASTGQECGLVLDKTCFYAEQGGQTYDEGYMVKEEESSEDKT------- 559
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+F++ N + + V + TL L+VGD++ L++D +RRPIMSNHTA
Sbjct: 560 ------------EFTVRNTQVRGGYVLHMGTLYGHLKVGDQVCLYVDEPKRRPIMSNHTA 607
Query: 437 THILNHALRFVLGPEADQKGSLV 459
THILN ALR VLG EADQ+GSLV
Sbjct: 608 THILNFALRSVLG-EADQRGSLV 629
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 44/55 (80%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LGE KV+PGD AW LYDTYGFPVDLT L+ EE+GL++D+E +E+ +K AQ
Sbjct: 395 RKINSLGEHKVIPGDTAWLLYDTYGFPVDLTSLIAEERGLTLDLESFEEERKAAQ 449
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
++P S AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 708 ADPSSPAGSITSVEFCGGTHLQNSGHAGPFIIVTEEAIAKGIRRIVAVTGAEA 760
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/46 (56%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Query: 225 VKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
VK +R +K FV+ S+G E G++LDK+ FYAEQGGQ YDEG+M+
Sbjct: 506 VKAIR--RDKMFVEEASTGQECGLVLDKTCFYAEQGGQTYDEGYMV 549
>gi|390335771|ref|XP_003724218.1| PREDICTED: alanine--tRNA ligase, cytoplasmic-like
[Strongylocentrotus purpuratus]
Length = 970
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/148 (45%), Positives = 92/148 (62%), Gaps = 18/148 (12%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G ++QFV+ V+ G + G+LLD+++FYAE GGQI+DEGFM D+ +E ++ V +
Sbjct: 509 GLRKDRQFVEEVNHGEDCGVLLDQTSFYAESGGQIFDEGFMEKEGDKD-VEFRVTN-VQV 566
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
+G Y L I ++ + K +RVGDKL L+ID RRRP+MSNHT T
Sbjct: 567 KGG-YTLHIGKVSAVGDTTK--------------IRVGDKLNLYIDEVRRRPVMSNHTGT 611
Query: 438 HILNHALRFVLGPEADQKGSLVYRYHLH 465
H+LN ALR VLG EADQ+GSLV L
Sbjct: 612 HVLNFALRKVLG-EADQRGSLVAPDRLR 638
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/36 (80%), Positives = 31/36 (86%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD 45
+ KVLPG AW LYDTYGFPVDLT LMVEEKG+SVD
Sbjct: 403 DCKVLPGRAAWLLYDTYGFPVDLTGLMVEEKGMSVD 438
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
S+P G TSVEFCGGTH+ A +G F ISSEEAIAKG IV+ G
Sbjct: 711 SDPAGPGGTVTSVEFCGGTHVRNAGDIGTFVISSEEAIAKGIRRIVAITG 760
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 32/37 (86%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
++QFV+ V+ G + G+LLD+++FYAE GGQI+DEGFM
Sbjct: 513 DRQFVEEVNHGEDCGVLLDQTSFYAESGGQIFDEGFM 549
>gi|56067749|gb|AAV70342.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067751|gb|AAV70343.1| alanyl-tRNA synthetase [Anopheles gambiae]
Length = 147
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 22/138 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDES
Sbjct: 17 NNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESS--------------- 61
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++S + + V + + TLRVGD++ H+D RR+ M NH+ATH LN
Sbjct: 62 -------EFNVSLVYNRGGYVLHIGVVEGTLRVGDEVHCHMDVVRRQLTMKNHSATHALN 114
Query: 442 HALRFVLGPEADQKGSLV 459
H+L VLG + DQ+GSLV
Sbjct: 115 HSLLKVLGQDTDQRGSLV 132
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV--VGLRY 283
K + +N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDE + V L Y
Sbjct: 10 KIVALRFNNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESSEFNVSLVY 69
Query: 284 NK 285
N+
Sbjct: 70 NR 71
>gi|56067721|gb|AAV70328.1| alanyl-tRNA synthetase [Anopheles gambiae]
Length = 147
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 22/138 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDES
Sbjct: 18 NNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESS--------------- 62
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++S + + V + + TLRVGD++ H+D RR+ M NH+ATH LN
Sbjct: 63 -------EFNVSLVYNRGGYVLHIGVVEGTLRVGDEVHCHMDVVRRQLTMKNHSATHALN 115
Query: 442 HALRFVLGPEADQKGSLV 459
H+L VLG + DQ+GSLV
Sbjct: 116 HSLLKVLGQDTDQRGSLV 133
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV--VGLRY 283
K + +N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDE + V L Y
Sbjct: 11 KIVALRFNNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESSEFNVSLVY 70
Query: 284 NK 285
N+
Sbjct: 71 NR 72
>gi|56067713|gb|AAV70324.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067715|gb|AAV70325.1| alanyl-tRNA synthetase [Anopheles gambiae]
Length = 146
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 22/138 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDES
Sbjct: 17 NNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESS--------------- 61
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++S + + V + + TLRVGD++ H+D RR+ M NH+ATH LN
Sbjct: 62 -------EFNVSLVYNRGGYVLHIGVVEGTLRVGDEVHCHMDVVRRQLTMKNHSATHALN 114
Query: 442 HALRFVLGPEADQKGSLV 459
H+L VLG + DQ+GSLV
Sbjct: 115 HSLLKVLGQDTDQRGSLV 132
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV--VGLRY 283
K + +N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDE + V L Y
Sbjct: 10 KIVALRFNNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESSEFNVSLVY 69
Query: 284 NK 285
N+
Sbjct: 70 NR 71
>gi|56067673|gb|AAV70304.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067677|gb|AAV70306.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067681|gb|AAV70308.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067683|gb|AAV70309.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067685|gb|AAV70310.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067699|gb|AAV70317.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067701|gb|AAV70318.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067705|gb|AAV70320.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067707|gb|AAV70321.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067709|gb|AAV70322.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067711|gb|AAV70323.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067717|gb|AAV70326.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067719|gb|AAV70327.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067725|gb|AAV70330.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067727|gb|AAV70331.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067737|gb|AAV70336.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067739|gb|AAV70337.1| alanyl-tRNA synthetase [Anopheles gambiae]
Length = 160
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 22/138 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDES
Sbjct: 31 NNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESS--------------- 75
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++S + + V + + TLRVGD++ H+D RR+ M NH+ATH LN
Sbjct: 76 -------EFNVSLVYNRGGYVLHIGVVEGTLRVGDEVHCHMDVVRRQLTMKNHSATHALN 128
Query: 442 HALRFVLGPEADQKGSLV 459
H+L VLG + DQ+GSLV
Sbjct: 129 HSLLKVLGQDTDQRGSLV 146
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV--VGLRY 283
K + +N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDE + V L Y
Sbjct: 24 KIVALRFNNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESSEFNVSLVY 83
Query: 284 NK 285
N+
Sbjct: 84 NR 85
>gi|56067661|gb|AAV70298.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067663|gb|AAV70299.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067741|gb|AAV70338.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067745|gb|AAV70340.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067747|gb|AAV70341.1| alanyl-tRNA synthetase [Anopheles gambiae]
Length = 161
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 22/138 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDES
Sbjct: 31 NNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESS--------------- 75
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++S + + V + + TLRVGD++ H+D RR+ M NH+ATH LN
Sbjct: 76 -------EFNVSLVYNRGGYVLHIGVVEGTLRVGDEVHCHMDVVRRQLTMKNHSATHALN 128
Query: 442 HALRFVLGPEADQKGSLV 459
H+L VLG + DQ+GSLV
Sbjct: 129 HSLLKVLGQDTDQRGSLV 146
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV--VGLRY 283
K + +N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDE + V L Y
Sbjct: 24 KIVALRFNNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESSEFNVSLVY 83
Query: 284 NK 285
N+
Sbjct: 84 NR 85
>gi|56067691|gb|AAV70313.1| alanyl-tRNA synthetase [Anopheles gambiae]
Length = 130
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 22/138 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDES
Sbjct: 1 NNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESS--------------- 45
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++S + + V + + TLRVGD++ H+D RR+ M NH+ATH LN
Sbjct: 46 -------EFNVSLVYNRGGYVLHIGVVEGTLRVGDEVHCHMDVVRRQLTMKNHSATHALN 98
Query: 442 HALRFVLGPEADQKGSLV 459
H+L VLG + DQ+GSLV
Sbjct: 99 HSLLKVLGQDTDQRGSLV 116
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV--VGLRYNK 285
N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDE + V L YN+
Sbjct: 1 NNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESSEFNVSLVYNR 55
>gi|56067679|gb|AAV70307.1| alanyl-tRNA synthetase [Anopheles gambiae]
Length = 160
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 22/138 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDES
Sbjct: 31 NNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESS--------------- 75
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++S + + V + + TLRVGD++ H+D RR+ M NH+ATH LN
Sbjct: 76 -------EFNVSLVYNRGGYVLHIGVVEGTLRVGDEVHCHMDVVRRQLTMKNHSATHALN 128
Query: 442 HALRFVLGPEADQKGSLV 459
H+L VLG + DQ+GSLV
Sbjct: 129 HSLLKVLGQDTDQRGSLV 146
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV--VGLRY 283
K + +N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDE + V L Y
Sbjct: 24 KVVALRFNNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESSEFNVSLVY 83
Query: 284 NK 285
N+
Sbjct: 84 NR 85
>gi|56067723|gb|AAV70329.1| alanyl-tRNA synthetase [Anopheles gambiae]
Length = 147
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 22/138 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDES
Sbjct: 18 NNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESS--------------- 62
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++S + + V + + TLRVGD++ H+D RR+ M NH+ATH LN
Sbjct: 63 -------EFNVSLVYNRGGYVLHIGVVEGTLRVGDEVHCHMDVMRRQLTMKNHSATHALN 115
Query: 442 HALRFVLGPEADQKGSLV 459
H+L VLG + DQ+GSLV
Sbjct: 116 HSLLKVLGQDTDQRGSLV 133
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV--VGLRY 283
K + +N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDE + V L Y
Sbjct: 11 KIVALRFNNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESSEFNVSLVY 70
Query: 284 NK 285
N+
Sbjct: 71 NR 72
>gi|56067669|gb|AAV70302.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067671|gb|AAV70303.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067743|gb|AAV70339.1| alanyl-tRNA synthetase [Anopheles gambiae]
Length = 161
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 22/138 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDES
Sbjct: 31 NNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESS--------------- 75
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++S + + V + + TLRVGD++ H+D RR+ M NH+ATH LN
Sbjct: 76 -------EFNVSLVYNRGGYVLHIGVVEGTLRVGDEVHCHMDVMRRQLTMKNHSATHALN 128
Query: 442 HALRFVLGPEADQKGSLV 459
H+L VLG + DQ+GSLV
Sbjct: 129 HSLLKVLGQDTDQRGSLV 146
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV--VGLRY 283
K + +N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDE + V L Y
Sbjct: 24 KIVALRFNNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESSEFNVSLVY 83
Query: 284 NK 285
N+
Sbjct: 84 NR 85
>gi|56067697|gb|AAV70316.1| alanyl-tRNA synthetase [Anopheles gambiae]
Length = 160
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 22/138 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDES
Sbjct: 31 NNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESS--------------- 75
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++S + + V + + TLRVGD++ H+D RR+ M NH+ATH LN
Sbjct: 76 -------EFNVSLVYNRGGYVLHIGVVEGTLRVGDEVHCHMDVMRRQLTMKNHSATHALN 128
Query: 442 HALRFVLGPEADQKGSLV 459
H+L VLG + DQ+GSLV
Sbjct: 129 HSLLKVLGQDTDQRGSLV 146
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV--VGLRY 283
K + +N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDE + V L Y
Sbjct: 24 KVVALRFNNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESSEFNVSLVY 83
Query: 284 NK 285
N+
Sbjct: 84 NR 85
>gi|56067689|gb|AAV70312.1| alanyl-tRNA synthetase [Anopheles gambiae]
Length = 130
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 22/138 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDES
Sbjct: 1 NNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESS--------------- 45
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++S + + V + + TLRVGD++ H+D RR+ M NH+ATH LN
Sbjct: 46 -------EFNVSLVYNRGGYVLHIGVVEGTLRVGDEVHCHMDVMRRQLTMKNHSATHALN 98
Query: 442 HALRFVLGPEADQKGSLV 459
H+L VLG + DQ+GSLV
Sbjct: 99 HSLLKVLGQDTDQRGSLV 116
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV--VGLRYNK 285
N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDE + V L YN+
Sbjct: 1 NNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESSEFNVSLVYNR 55
>gi|56067733|gb|AAV70334.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067735|gb|AAV70335.1| alanyl-tRNA synthetase [Anopheles gambiae]
Length = 162
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 22/138 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDES
Sbjct: 31 NNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESS--------------- 75
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++S + + V + + TLRVGD++ H+D RR+ M NH+ATH LN
Sbjct: 76 -------EFNVSLVYNRGGYVLHIGVVEGTLRVGDEVHCHMDVMRRQLTMKNHSATHALN 128
Query: 442 HALRFVLGPEADQKGSLV 459
H+L VLG + DQ+GSLV
Sbjct: 129 HSLLKVLGQDTDQRGSLV 146
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV--VGLRY 283
K + +N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDE + V L Y
Sbjct: 24 KIVALRFNNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESSEFNVSLVY 83
Query: 284 NK 285
N+
Sbjct: 84 NR 85
>gi|56067665|gb|AAV70300.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067667|gb|AAV70301.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067675|gb|AAV70305.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067687|gb|AAV70311.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067703|gb|AAV70319.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067729|gb|AAV70332.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067731|gb|AAV70333.1| alanyl-tRNA synthetase [Anopheles gambiae]
Length = 160
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 22/138 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDES
Sbjct: 31 NNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESS--------------- 75
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++S + + V + + TLRVGD++ H+D RR+ M NH+ATH LN
Sbjct: 76 -------EFNVSLVYNRGGYVLHIGVVEGTLRVGDEVHCHMDVMRRQLTMKNHSATHALN 128
Query: 442 HALRFVLGPEADQKGSLV 459
H+L VLG + DQ+GSLV
Sbjct: 129 HSLLKVLGQDTDQRGSLV 146
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV--VGLRY 283
K + +N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDE + V L Y
Sbjct: 24 KIVALRFNNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESSEFNVSLVY 83
Query: 284 NK 285
N+
Sbjct: 84 NR 85
>gi|340370458|ref|XP_003383763.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like isoform 2
[Amphimedon queenslandica]
Length = 966
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 91/163 (55%), Gaps = 34/163 (20%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
NK+FVD VSSG G+L DK+ FYAEQGGQIYDEG+++ + +E
Sbjct: 511 NKEFVDEVSSGQVVGVLTDKTCFYAEQGGQIYDEGYIVKIGEEET--------------- 555
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F + +++ + V + ++ TLRVGDK+ + ID RR +M NHT TH+LN
Sbjct: 556 -------EFIVRDVQVRGGYVLHVGSIEGTLRVGDKVNMTIDGDRRSDVMKNHTGTHVLN 608
Query: 442 HALRFVLGPEADQKGSLVYRYHLH-----------ENIMECEE 473
ALR V+G EADQKGSLV L + I +CEE
Sbjct: 609 FALRRVIG-EADQKGSLVAPDRLRFDFSAKGAMKTDQIKKCEE 650
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/54 (70%), Positives = 43/54 (79%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQ 63
E+ +LPGDVAWRLYDTYGFPVDLTQLM EE+ ++VDME YE AK AQ E Q
Sbjct: 401 ENNLLPGDVAWRLYDTYGFPVDLTQLMAEERQVTVDMEGYEKAKAMAQVREEEQ 454
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 39/46 (84%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
EG+V+ LRYNK+FVD VSSG G+L DK+ FYAEQGGQIYDEG++
Sbjct: 502 EGSVIALRYNKEFVDEVSSGQVVGVLTDKTCFYAEQGGQIYDEGYI 547
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT 277
+ YNK+FVD VSSG G+L DK+ FYAEQGGQIYDEG+++ + +E T
Sbjct: 506 IALRYNKEFVDEVSSGQVVGVLTDKTCFYAEQGGQIYDEGYIVKIGEEET 555
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 47 EVYEDAKK---------KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAK 97
EVY D + K +P + SVEFCGGTHL + H+ F I +EEAIAK
Sbjct: 684 EVYPDPVRVLSIGVPVDKLVEDPSGPWAINYSVEFCGGTHLRSSGHIQSFAIVTEEAIAK 743
Query: 98 G-SNIVSYCGSKGTFQSHSGSINDEMVN 124
G IV+ G + ++ E V+
Sbjct: 744 GIRRIVALTGMEAVKAHKRAAVIQERVD 771
>gi|340370456|ref|XP_003383762.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like isoform 1
[Amphimedon queenslandica]
Length = 966
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 91/163 (55%), Gaps = 34/163 (20%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
NK+FVD VSSG G+L DK+ FYAEQGGQIYDEG+++ + +E
Sbjct: 511 NKEFVDEVSSGQVVGVLTDKTCFYAEQGGQIYDEGYIVKIGEEET--------------- 555
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F + +++ + V + ++ TLRVGDK+ + ID RR +M NHT TH+LN
Sbjct: 556 -------EFIVRDVQVRGGYVLHVGSIEGTLRVGDKVNMTIDGDRRSDVMKNHTGTHVLN 608
Query: 442 HALRFVLGPEADQKGSLVYRYHLH-----------ENIMECEE 473
ALR V+G EADQKGSLV L + I +CEE
Sbjct: 609 FALRRVIG-EADQKGSLVAPDRLRFDFSAKGAMKTDQIKKCEE 650
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/50 (72%), Positives = 42/50 (84%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
E+ +LPGDVAWRLYDTYGFPVDLTQLM EE+ ++VDME YE AK AQ +
Sbjct: 401 ENNLLPGDVAWRLYDTYGFPVDLTQLMAEERQVTVDMEGYEKAKAMAQEK 450
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/46 (69%), Positives = 39/46 (84%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
EG+V+ LRYNK+FVD VSSG G+L DK+ FYAEQGGQIYDEG++
Sbjct: 502 EGSVIALRYNKEFVDEVSSGQVVGVLTDKTCFYAEQGGQIYDEGYI 547
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 38/50 (76%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT 277
+ YNK+FVD VSSG G+L DK+ FYAEQGGQIYDEG+++ + +E T
Sbjct: 506 IALRYNKEFVDEVSSGQVVGVLTDKTCFYAEQGGQIYDEGYIVKIGEEET 555
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 10/88 (11%)
Query: 47 EVYEDAKK---------KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAK 97
EVY D + K +P + SVEFCGGTHL + H+ F I +EEAIAK
Sbjct: 684 EVYPDPVRVLSIGVPVDKLVEDPSGPWAINYSVEFCGGTHLRSSGHIQSFAIVTEEAIAK 743
Query: 98 G-SNIVSYCGSKGTFQSHSGSINDEMVN 124
G IV+ G + ++ E V+
Sbjct: 744 GIRRIVALTGMEAVKAHKRAAVIQERVD 771
>gi|425868831|gb|AFY04545.1| alanyl-tRNA synthetase-like protein, partial [Anopheles gambiae]
Length = 575
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 22/138 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDES
Sbjct: 174 NNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESS--------------- 218
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++S + + V + + TLRVGD++ H+D RR+ M NH+ATH LN
Sbjct: 219 -------EFNVSLVYNRGGYVLHIGVVEGTLRVGDEVHCHMDVVRRQLTMKNHSATHALN 271
Query: 442 HALRFVLGPEADQKGSLV 459
H+L VLG + DQ+GSLV
Sbjct: 272 HSLLKVLGQDTDQRGSLV 289
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 45/51 (88%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
+TIAKLG SKV+PGDVAWRLYDTYGFP+DLT LM EEK +++DME YE AK
Sbjct: 54 RTIAKLGNSKVIPGDVAWRLYDTYGFPIDLTLLMAEEKQMTIDMEGYEKAK 104
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV--VGLRYNK 285
LRF N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDE + V L YN+
Sbjct: 171 LRF--NNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESSEFNVSLVYNR 228
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKK--------- 54
TI ++ E++ L +V R Y +L SV EVY D +
Sbjct: 305 TIEQVAEAERLTREVVKRNVQVYAKEANLAVAKTIRGLRSVFDEVYPDPVRVISFGVPVE 364
Query: 55 KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ +++P +AG+ SVEFCGGTHL + H+ DF I++EEAIAKG IV+ G +
Sbjct: 365 QLEADPTGEAGVINSVEFCGGTHLHQSGHMVDFVITTEEAIAKGIRRIVALTGPEA 420
>gi|158298580|ref|XP_318757.4| AGAP009701-PA [Anopheles gambiae str. PEST]
gi|157013952|gb|EAA14564.4| AGAP009701-PA [Anopheles gambiae str. PEST]
Length = 946
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 83/138 (60%), Gaps = 22/138 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDES
Sbjct: 515 NNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESS--------------- 559
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++S + + V + + TLRVGD++ H+D RR+ M NH+ATH LN
Sbjct: 560 -------EFNVSLVYNRGGYVLHIGVVEGTLRVGDEVHCHMDVVRRQLTMKNHSATHALN 612
Query: 442 HALRFVLGPEADQKGSLV 459
H+L VLG + DQ+GSLV
Sbjct: 613 HSLLKVLGQDTDQRGSLV 630
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 45/51 (88%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
+TIAKLG SKV+PGDVAWRLYDTYGFP+DLT LM EEK +++DME YE AK
Sbjct: 395 RTIAKLGNSKVIPGDVAWRLYDTYGFPIDLTLLMAEEKQMTIDMEGYEKAK 445
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV--VGLRY 283
K + +N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDE + V L Y
Sbjct: 508 KIVALRFNNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESSEFNVSLVY 567
Query: 284 NK 285
N+
Sbjct: 568 NR 569
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 60/116 (51%), Gaps = 10/116 (8%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKK--------- 54
TI ++ E++ L +V R Y +L SV EVY D +
Sbjct: 646 TIEQVAEAERLTREVVKRNVQVYAKEANLAVAKTIRGLRSVFDEVYPDPVRVISFGVPVE 705
Query: 55 KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ +++P +AG+ SVEFCGGTHL + H+ DF I++EEAIAKG IV+ G +
Sbjct: 706 QLEADPTGEAGVINSVEFCGGTHLHQSGHMVDFVITTEEAIAKGIRRIVALTGPEA 761
>gi|194863135|ref|XP_001970293.1| GG23450 [Drosophila erecta]
gi|190662160|gb|EDV59352.1| GG23450 [Drosophila erecta]
Length = 966
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 83/136 (61%), Gaps = 22/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE+ E + N G Y
Sbjct: 516 QFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEAN-EFLVDRVYNRGG--YI 572
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
L I + + TL+VGD+L+LHID RR M NH+ATH LNH
Sbjct: 573 LHIGI-------------------VEGTLKVGDELELHIDVERRWLTMKNHSATHALNHC 613
Query: 444 LRFVLGPEADQKGSLV 459
L VLG + DQKGSLV
Sbjct: 614 LLQVLGKDTDQKGSLV 629
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 41/51 (80%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
+TI KLG +PGDVAWRLYDTYGFPVDLTQLM EEK L +DM+ YE AK
Sbjct: 394 RTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLKIDMDGYEAAK 444
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRY 283
K + + QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE +V Y
Sbjct: 507 KIVALRFENQFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEANEFLVDRVY 566
Query: 284 NK 285
N+
Sbjct: 567 NR 568
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 12/117 (10%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGL-SVDMEVYEDAKK-------- 54
TI ++ +++ L ++ ++ Y L L + +GL SV EVY D +
Sbjct: 645 TIEQVAKTEQLTKEMVYKNVPIYAKESKLA-LAKKIRGLRSVFDEVYPDPVRVISFGVSV 703
Query: 55 -KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ P+S+AG +TSVEFCGGTHL + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 704 DDLEQNPDSEAGEQTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEA 760
>gi|380028001|ref|XP_003697700.1| PREDICTED: alanine--tRNA ligase, cytoplasmic-like [Apis florea]
Length = 1192
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 84/138 (60%), Gaps = 23/138 (16%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K FV+ VSSG E GILLD++NFYAEQGGQ+YDEGF+ ++DE
Sbjct: 516 KTFVNEVSSGEEVGILLDQTNFYAEQGGQMYDEGFLTKIDDEDT---------------- 559
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+ + N++ + V + +S L+ DK+ +IDT RRR +MSNHTATH LN
Sbjct: 560 ------EVHIKNVQVRGGYVLHIGIVSQGKLKKNDKVFSNIDTTRRRLLMSNHTATHALN 613
Query: 442 HALRFVLGPEADQKGSLV 459
+ALR +LG E DQKGSLV
Sbjct: 614 YALREILGTEVDQKGSLV 631
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/63 (69%), Positives = 52/63 (82%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+TI KL S VLPGDVAWRLYDTYGFP DLTQLMVEEKGL VD+ YE+AKK+AQ ++
Sbjct: 395 RTIVKLESSNVLPGDVAWRLYDTYGFPFDLTQLMVEEKGLKVDIIGYEEAKKQAQLISQN 454
Query: 63 QAG 65
++G
Sbjct: 455 KSG 457
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 40/49 (81%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLR 282
K FV+ VSSG E GILLD++NFYAEQGGQ+YDEGF+ ++DE T V ++
Sbjct: 516 KTFVNEVSSGEEVGILLDQTNFYAEQGGQMYDEGFLTKIDDEDTEVHIK 564
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 54/103 (52%), Gaps = 16/103 (15%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGME 67
LG +K + G A +TY PV + + G+ V ED +K P S ++
Sbjct: 675 LGLAKTIQGLRAM-FEETYPDPVRVVSI-----GIPV-----EDLEK----NPLSSGALK 719
Query: 68 TSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
TSVEFCGGTHL H+ +F I SEEAIAKG IV+ G +
Sbjct: 720 TSVEFCGGTHLHYTGHIRNFVIVSEEAIAKGIRRIVALTGPEA 762
>gi|17862882|gb|AAL39918.1| SD01519p [Drosophila melanogaster]
Length = 540
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 22/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE+ E + N G Y
Sbjct: 90 QFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEAN-EFLVDRVYNRGG--YI 146
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
L I + + TL+VGD+L+LHID RR M NH+ATH LNH
Sbjct: 147 LHIGV-------------------VEGTLKVGDELELHIDVERRWLTMKNHSATHALNHC 187
Query: 444 LRFVLGPEADQKGSLV 459
L VLG + +QKGSLV
Sbjct: 188 LLQVLGKDTEQKGSLV 203
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRYNK 285
LRF QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE +V YN+
Sbjct: 85 LRFE--NQFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEANEFLVDRVYNR 142
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 12/117 (10%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGL-SVDMEVYEDAKK-------- 54
TI ++ +++ L ++ ++ Y L L + +GL SV EVY D +
Sbjct: 219 TIEQVSKTEQLTKEMVYKNVPIYAKESKLA-LAKKIRGLRSVFDEVYPDPVRVISFGVPV 277
Query: 55 -KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ + P+S+AG +TSVEFCGGTHL + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 278 DELEQNPDSEAGEQTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEA 334
>gi|442755487|gb|JAA69903.1| Putative alanyl-trna synthetase translation [Ixodes ricinus]
Length = 968
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 87/142 (61%), Gaps = 23/142 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
++KQFV+S+ +G + G++LD++NFYAE GGQ YD GFM +E
Sbjct: 510 LRTSKQFVESIEAGQQCGVILDQTNFYAESGGQTYDTGFMTCETNED------------- 556
Query: 379 GSKYALPIFLQFSLSNLKKKKK-LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
++F+++ + + +V + +S TL+VGDKLKL ID RR+ +M+NHT T
Sbjct: 557 ---------VEFAVTEVHTQGGYVVHIGRLISGTLKVGDKLKLAIDEQRRKLVMNNHTGT 607
Query: 438 HILNHALRFVLGPEADQKGSLV 459
HILN ALR VL EADQ+GSLV
Sbjct: 608 HILNFALRKVLTAEADQRGSLV 629
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 52/63 (82%), Gaps = 2/63 (3%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+T+ KLG+ K LPGDVAWRLYDTYGFP+DLTQLMVEEKGL+VDME YE AK AQ S
Sbjct: 393 KTVNKLGDQKFLPGDVAWRLYDTYGFPIDLTQLMVEEKGLAVDMESYEKAKAAAQL--AS 450
Query: 63 QAG 65
QAG
Sbjct: 451 QAG 453
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
++P S AG TS+EFCGGTHL A HVGDF I++EEAIAKG IV+ G +
Sbjct: 708 ADPSSPAGSLTSIEFCGGTHLKRAGHVGDFVITTEEAIAKGIRRIVALTGPEA 760
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
L +KQFV+S+ +G + G++LD++NFYAE GGQ YD GFM +E
Sbjct: 508 LVLRTSKQFVESIEAGQQCGVILDQTNFYAESGGQTYDTGFMTCETNE 555
>gi|425868862|gb|AFY04559.1| alanyl-tRNA synthetase-like protein, partial [Drosophila
melanogaster]
Length = 575
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 22/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE+ E + N G Y
Sbjct: 176 QFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEAN-EFLVDRVYNRGG--YI 232
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
L I + + TL+VGD+L+LHID RR M NH+ATH LNH
Sbjct: 233 LHIGV-------------------VEGTLKVGDELELHIDVERRWLTMKNHSATHALNHC 273
Query: 444 LRFVLGPEADQKGSLV 459
L VLG + +QKGSLV
Sbjct: 274 LLQVLGKDTEQKGSLV 289
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 41/51 (80%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
+TI KLG +PGDVAWRLYDTYGFPVDLTQLM EEK L +DM+ YE AK
Sbjct: 54 RTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLKIDMDGYEAAK 104
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRYNK 285
LRF QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE +V YN+
Sbjct: 171 LRFE--NQFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEANEFLVDRVYNR 228
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 12/117 (10%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGL-SVDMEVYEDAKK-------- 54
TI ++ +++ L ++ ++ Y L L + +GL SV EVY D +
Sbjct: 305 TIEQVSKTEQLTKEMVYKNVPIYAKESKLA-LAKKIRGLRSVFDEVYPDPVRVISFGVPV 363
Query: 55 -KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ + P+S+AG +TSVEFCGGTHL + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 364 DELEQNPDSEAGEQTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEA 420
>gi|56067693|gb|AAV70314.1| alanyl-tRNA synthetase [Anopheles gambiae]
gi|56067695|gb|AAV70315.1| alanyl-tRNA synthetase [Anopheles gambiae]
Length = 144
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 81/136 (59%), Gaps = 22/136 (16%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDES
Sbjct: 31 NNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESS--------------- 75
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++S + + V + + TLRVGD++ H+D RR+ M NH+ATH LN
Sbjct: 76 -------EFNVSLVYNRGGYVLHIGVVEGTLRVGDEVHCHMDVVRRQLTMKNHSATHALN 128
Query: 442 HALRFVLGPEADQKGS 457
H+L VLG + DQ+GS
Sbjct: 129 HSLLKVLGQDTDQRGS 144
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV--VGLRY 283
K + +N FV+ V +G E G++LD++NFYAE GGQIYD+GF++ VNDE + V L Y
Sbjct: 24 KIVALRFNNAFVEEVQAGQECGVILDRTNFYAESGGQIYDQGFLVKVNDESSEFNVSLVY 83
Query: 284 NK 285
N+
Sbjct: 84 NR 85
>gi|312379940|gb|EFR26076.1| hypothetical protein AND_08072 [Anopheles darlingi]
Length = 975
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 58/135 (42%), Positives = 83/135 (61%), Gaps = 22/135 (16%)
Query: 325 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYAL 384
FV+ V++G E G++LDK+NFYAE GGQIYD+G+++ V DES
Sbjct: 525 FVEEVTAGQECGVILDKTNFYAESGGQIYDQGYLVKVGDESS------------------ 566
Query: 385 PIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
+F++S + + V + + TLRVGD++ H+DT RR+ M NH+ATH LNH+L
Sbjct: 567 ----EFNVSLVYNRGGYVLHIGVVEGTLRVGDEVDCHLDTVRRQLTMKNHSATHALNHSL 622
Query: 445 RFVLGPEADQKGSLV 459
VLG + DQ+GSLV
Sbjct: 623 LKVLGQDTDQRGSLV 637
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 49/54 (90%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TIAKLG+SKV+PGDVAWRLYDTYGFPVDLTQLM EEK +S+DME YE AK ++
Sbjct: 402 RTIAKLGDSKVIPGDVAWRLYDTYGFPVDLTQLMAEEKEMSIDMEGYERAKHES 455
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%), Gaps = 2/52 (3%)
Query: 236 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV--VGLRYNK 285
FV+ V++G E G++LDK+NFYAE GGQIYD+G+++ V DE + V L YN+
Sbjct: 525 FVEEVTAGQECGVILDKTNFYAESGGQIYDQGYLVKVGDESSEFNVSLVYNR 576
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 64/117 (54%), Gaps = 12/117 (10%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGL-SVDMEVYEDAKK-------- 54
TI ++GE++ L +V + + +L + +GL SV EVY D +
Sbjct: 653 TIEQVGEAERLTREVVRKNVQVFAKETNLA-VAKSIRGLRSVFDEVYPDPVRVISFGVPV 711
Query: 55 -KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ ++P S AG+ SVEFCGGTHL + H+ DF I+SEEAIAKG IV+ G +
Sbjct: 712 EQLAADPTSDAGVLNSVEFCGGTHLHQSGHMVDFVITSEEAIAKGIRRIVALTGPEA 768
>gi|425868869|gb|AFY04562.1| alanyl-tRNA synthetase-like protein, partial [Sepsis cynipsea]
Length = 573
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 82/138 (59%), Gaps = 22/138 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
+ +FV+ +SSG AG++LD +NFYAE GGQIYD+G ++ VNDE+ E + N G
Sbjct: 174 DNKFVNEISSGQRAGVVLDSTNFYAESGGQIYDQGALVKVNDEAN-EFLVDRVFNRGG-- 230
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
Y L I + + TL VGD+L+LHID ARR M NH+ATH LN
Sbjct: 231 YILHIGI-------------------VEGTLAVGDELQLHIDFARRSLTMKNHSATHALN 271
Query: 442 HALRFVLGPEADQKGSLV 459
H L VLG + DQKGSLV
Sbjct: 272 HCLLQVLGKDTDQKGSLV 289
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 47/54 (87%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TIAKLG+ K++PGDVAWRLYDTYGFPVDLTQLM EEK L +DM YE AK+K+
Sbjct: 54 RTIAKLGDQKIIPGDVAWRLYDTYGFPVDLTQLMAEEKSLEIDMPGYEAAKQKS 107
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 43/61 (70%), Gaps = 1/61 (1%)
Query: 217 SQTKHTPFV-KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
++ K TP K + Y+ +FV+ +SSG AG++LD +NFYAE GGQIYD+G ++ VNDE
Sbjct: 157 AEYKFTPCSGKIVALRYDNKFVNEISSGQRAGVVLDSTNFYAESGGQIYDQGALVKVNDE 216
Query: 276 G 276
Sbjct: 217 A 217
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
++ P+ +AG +TSVEFCGGTHL + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 367 EANPDGEAGEKTSVEFCGGTHLRRSGHIVDFVISSEEAIAKGIRRIVALTGPEA 420
>gi|391342382|ref|XP_003745499.1| PREDICTED: alanine--tRNA ligase, cytoplasmic-like isoform 1
[Metaseiulus occidentalis]
Length = 965
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 86/140 (61%), Gaps = 23/140 (16%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
S KQFV+ V++G GI+LD++NFYAEQGGQIYD GF+ V +E
Sbjct: 516 SKKQFVNGVNAGDLCGIVLDRTNFYAEQGGQIYDTGFLQHVENED--------------- 560
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHI 439
++F+++ + + V + L+ TL+VGD+LKL ID RR +M NHT TH+
Sbjct: 561 -------VEFAVTEVHLQGGFVVHIGRLAAGTLKVGDELKLQIDETRRVAVMQNHTGTHV 613
Query: 440 LNHALRFVLGPEADQKGSLV 459
LN+ALR VL +ADQ+GSLV
Sbjct: 614 LNYALRKVLSADADQRGSLV 633
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+ + ++K+ + +LPG+VAWRLYDTYGFPVDLTQLMVEE G+ VD YE AK+ A
Sbjct: 394 LTKAVSKIEKGGLLPGEVAWRLYDTYGFPVDLTQLMVEESGIFVDSAGYEKAKQAA 449
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 55/98 (56%), Gaps = 2/98 (2%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
+ P+ + TSVEFCGGTHL A H+GDF I+ EEAIAKG I++ G++ +
Sbjct: 712 ANPDRGDALNTSVEFCGGTHLQNAGHIGDFVIAQEEAIAKGIRRIMALTGTEAAKATKRA 771
Query: 117 SINDEMVNKYPSLYRLFRTVHKQ-KYVQDALNVSCLSF 153
+ VN SL +++ K+ + D ++ S +S+
Sbjct: 772 EHLESEVNTLKSLVGKDKSLVKRITELSDEISQSSISY 809
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 34/42 (80%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
KQFV+ V++G GI+LD++NFYAEQGGQIYD GF+ V +E
Sbjct: 518 KQFVNGVNAGDLCGIVLDRTNFYAEQGGQIYDTGFLQHVENE 559
>gi|391342384|ref|XP_003745500.1| PREDICTED: alanine--tRNA ligase, cytoplasmic-like isoform 2
[Metaseiulus occidentalis]
Length = 975
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 86/140 (61%), Gaps = 23/140 (16%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
S KQFV+ V++G GI+LD++NFYAEQGGQIYD GF+ V +E
Sbjct: 513 SKKQFVNGVNAGDLCGIVLDRTNFYAEQGGQIYDTGFLQHVENED--------------- 557
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHI 439
++F+++ + + V + L+ TL+VGD+LKL ID RR +M NHT TH+
Sbjct: 558 -------VEFAVTEVHLQGGFVVHIGRLAAGTLKVGDELKLQIDETRRVAVMQNHTGTHV 610
Query: 440 LNHALRFVLGPEADQKGSLV 459
LN+ALR VL +ADQ+GSLV
Sbjct: 611 LNYALRKVLSADADQRGSLV 630
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+ + ++K+ + +LPG+VAWRLYDTYGFPVDLTQLMVEE G+ VD YE AK+ A
Sbjct: 391 LTKAVSKIEKGGLLPGEVAWRLYDTYGFPVDLTQLMVEESGIFVDSAGYEKAKQAA 446
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
+ P+ + TSVEFCGGTHL A H+GDF I+ EEAIAKG I++ G++ +
Sbjct: 709 ANPDRGDALNTSVEFCGGTHLQNAGHIGDFVIAQEEAIAKGIRRIMALTGTEAAKATKRA 768
Query: 117 SINDEMVNKYPSL 129
+ VN SL
Sbjct: 769 EHLESEVNTLKSL 781
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 34/42 (80%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
KQFV+ V++G GI+LD++NFYAEQGGQIYD GF+ V +E
Sbjct: 515 KQFVNGVNAGDLCGIVLDRTNFYAEQGGQIYDTGFLQHVENE 556
>gi|391342386|ref|XP_003745501.1| PREDICTED: alanine--tRNA ligase, cytoplasmic-like isoform 3
[Metaseiulus occidentalis]
Length = 977
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 62/140 (44%), Positives = 86/140 (61%), Gaps = 23/140 (16%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
S KQFV+ V++G GI+LD++NFYAEQGGQIYD GF+ V +E
Sbjct: 515 SKKQFVNGVNAGDLCGIVLDRTNFYAEQGGQIYDTGFLQHVENED--------------- 559
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHI 439
++F+++ + + V + L+ TL+VGD+LKL ID RR +M NHT TH+
Sbjct: 560 -------VEFAVTEVHLQGGFVVHIGRLAAGTLKVGDELKLQIDETRRVAVMQNHTGTHV 612
Query: 440 LNHALRFVLGPEADQKGSLV 459
LN+ALR VL +ADQ+GSLV
Sbjct: 613 LNYALRKVLSADADQRGSLV 632
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/56 (60%), Positives = 44/56 (78%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+ + ++K+ + +LPG+VAWRLYDTYGFPVDLTQLMVEE G+ VD YE AK+ A
Sbjct: 393 LTKAVSKIEKGGLLPGEVAWRLYDTYGFPVDLTQLMVEESGIFVDSAGYEKAKQAA 448
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
+ P+ + TSVEFCGGTHL A H+GDF I+ EEAIAKG I++ G++ +
Sbjct: 711 ANPDRGDALNTSVEFCGGTHLQNAGHIGDFVIAQEEAIAKGIRRIMALTGTEAAKATKRA 770
Query: 117 SINDEMVNKYPSL 129
+ VN SL
Sbjct: 771 EHLESEVNTLKSL 783
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 34/42 (80%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
KQFV+ V++G GI+LD++NFYAEQGGQIYD GF+ V +E
Sbjct: 517 KQFVNGVNAGDLCGIVLDRTNFYAEQGGQIYDTGFLQHVENE 558
>gi|194759416|ref|XP_001961945.1| GF14684 [Drosophila ananassae]
gi|190615642|gb|EDV31166.1| GF14684 [Drosophila ananassae]
Length = 966
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 22/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE+ E + N G Y
Sbjct: 516 QFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEAN-EFLVDRVYNRGG--YI 572
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
L I + + TL+VGD+L+LHID RR M NH+ATH LNH
Sbjct: 573 LHIGV-------------------VEGTLKVGDELQLHIDVERRWLTMKNHSATHALNHC 613
Query: 444 LRFVLGPEADQKGSLV 459
L VLG + +QKGSLV
Sbjct: 614 LLQVLGKDTEQKGSLV 629
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 41/51 (80%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
+TI KLG +PGDVAWRLYDTYGFPVDLTQLM EEK L +DME YE AK
Sbjct: 394 RTIEKLGSQATIPGDVAWRLYDTYGFPVDLTQLMAEEKSLQIDMEGYEAAK 444
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRY 283
K + + QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE +V Y
Sbjct: 507 KIVALRFENQFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEANEFLVDRVY 566
Query: 284 NK 285
N+
Sbjct: 567 NR 568
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%), Gaps = 6/58 (10%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM------SNKQFVDSV 329
+V LR+ QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G + +N+ VD V
Sbjct: 508 IVALRFENQFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEANEFLVDRV 565
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 11/81 (13%)
Query: 40 KGL-SVDMEVYEDAKK---------KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCI 89
+GL SV EVY D + + + P+S+AG +TSVEFCGGTHL + H+ DF I
Sbjct: 680 RGLRSVFDEVYPDPVRVISFGVPVDELEQNPDSEAGEKTSVEFCGGTHLRRSGHIMDFVI 739
Query: 90 SSEEAIAKG-SNIVSYCGSKG 109
SSEEAIAKG IV+ G +
Sbjct: 740 SSEEAIAKGIRRIVALTGPEA 760
>gi|405978504|gb|EKC42884.1| Alanyl-tRNA synthetase, cytoplasmic [Crassostrea gigas]
Length = 965
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 83/138 (60%), Gaps = 23/138 (16%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
NK+FV+ VSSG E G+LLD+++FYAEQGGQIYD GF++ ND
Sbjct: 512 NKEFVEEVSSGQECGVLLDRTSFYAEQGGQIYDTGFLVKENDPD---------------- 555
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
++FS+ N++ + V + + LR GD ++L+ID RR +M NHT TH+LN
Sbjct: 556 ------VEFSVRNVQVRAGYVLHIGVMEGVLRTGDIVQLNIDEERRCSVMKNHTGTHMLN 609
Query: 442 HALRFVLGPEADQKGSLV 459
LR +L EADQ+GSLV
Sbjct: 610 FGLREIL-KEADQRGSLV 626
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/72 (61%), Positives = 53/72 (73%), Gaps = 2/72 (2%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+TI KLG++ LPGD+AWRLYDTYGFPVDLT LM EEKGL+VDM YE AKK AQ+ +
Sbjct: 395 RTIGKLGDTTSLPGDIAWRLYDTYGFPVDLTALMAEEKGLAVDMPAYESAKKDAQALSQG 454
Query: 63 QAGMETSVEFCG 74
G T+ + G
Sbjct: 455 TGG--TAADLIG 464
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 38/45 (84%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
G V+ LR NK+FV+ VSSG E G+LLD+++FYAEQGGQIYD GF+
Sbjct: 504 GKVIALRRNKEFVEEVSSGQECGVLLDRTSFYAEQGGQIYDTGFL 548
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLR 282
K + NK+FV+ VSSG E G+LLD+++FYAEQGGQIYD GF++ ND +R
Sbjct: 505 KVIALRRNKEFVEEVSSGQECGVLLDRTSFYAEQGGQIYDTGFLVKENDPDVEFSVR 561
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSH 114
+P TSVEFCGGTHL A H+G I SEEAIAKG I++ G++ H
Sbjct: 706 DPMGPGASTTSVEFCGGTHLKRAGHIGKMVIVSEEAIAKGIRRIIALTGTEAVKAQH 762
>gi|195473021|ref|XP_002088795.1| GE11031 [Drosophila yakuba]
gi|194174896|gb|EDW88507.1| GE11031 [Drosophila yakuba]
Length = 966
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 22/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE+ E + N G Y
Sbjct: 516 QFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEAN-EFLVDRVYNRGG--YI 572
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
L I + + TL+VGD+L+LHID RR M NH+ATH LNH
Sbjct: 573 LHIGV-------------------VEGTLKVGDELELHIDVERRWLTMKNHSATHALNHC 613
Query: 444 LRFVLGPEADQKGSLV 459
L VLG + +QKGSLV
Sbjct: 614 LLQVLGKDTEQKGSLV 629
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 41/51 (80%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
+TI KLG +PGDVAWRLYDTYGFPVDLTQLM EEK L +DM+ YE AK
Sbjct: 394 RTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLKIDMDGYEAAK 444
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRYNK 285
LRF QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE +V YN+
Sbjct: 511 LRFE--NQFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEANEFLVDRVYNR 568
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 12/117 (10%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGL-SVDMEVYEDAKK-------- 54
TI ++ +++ L ++ ++ Y L L + +GL SV EVY D +
Sbjct: 645 TIEQVSKTEQLTKEMVYKNVPIYAKESKLA-LAKKIRGLRSVFDEVYPDPVRVISFGVSV 703
Query: 55 -KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ + P+S+AG +TSVEFCGGTHL + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 704 DELEQNPDSEAGEQTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEA 760
>gi|195339200|ref|XP_002036208.1| GM12994 [Drosophila sechellia]
gi|194130088|gb|EDW52131.1| GM12994 [Drosophila sechellia]
Length = 966
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 22/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE+ E + N G Y
Sbjct: 516 QFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEAN-EFLVDRVYNRGG--YI 572
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
L I + + TL+VGD+L+LHID RR M NH+ATH LNH
Sbjct: 573 LHIGV-------------------VEGTLKVGDELELHIDVERRWLTMKNHSATHALNHC 613
Query: 444 LRFVLGPEADQKGSLV 459
L VLG + +QKGSLV
Sbjct: 614 LLQVLGKDTEQKGSLV 629
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 41/51 (80%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
+TI KLG +PGDVAWRLYDTYGFPVDLTQLM EEK L +DM+ YE AK
Sbjct: 394 RTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLKIDMDGYEAAK 444
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRYNK 285
LRF QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE +V YN+
Sbjct: 511 LRFE--NQFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEANEFLVDRVYNR 568
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 12/117 (10%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGL-SVDMEVYEDAKK-------- 54
TI ++ +++ L ++ ++ Y L L + +GL SV EVY D +
Sbjct: 645 TIEQVSKTEQLTKEMVYKNVPIYAKESKLA-LAKKIRGLRSVFDEVYPDPVRVISFGVSV 703
Query: 55 -KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ + P+S+AG +TSVEFCGGTHL + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 704 DELEQNPDSEAGEQTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEA 760
>gi|24582809|ref|NP_523511.2| Alanyl-tRNA synthetase, isoform A [Drosophila melanogaster]
gi|45552267|ref|NP_995656.1| Alanyl-tRNA synthetase, isoform B [Drosophila melanogaster]
gi|75027177|sp|Q9VLM8.1|SYAC_DROME RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|7297398|gb|AAF52657.1| Alanyl-tRNA synthetase, isoform A [Drosophila melanogaster]
gi|45445248|gb|AAS64737.1| Alanyl-tRNA synthetase, isoform B [Drosophila melanogaster]
Length = 966
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 22/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE+ E + N G Y
Sbjct: 516 QFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEAN-EFLVDRVYNRGG--YI 572
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
L I + + TL+VGD+L+LHID RR M NH+ATH LNH
Sbjct: 573 LHIGV-------------------VEGTLKVGDELELHIDVERRWLTMKNHSATHALNHC 613
Query: 444 LRFVLGPEADQKGSLV 459
L VLG + +QKGSLV
Sbjct: 614 LLQVLGKDTEQKGSLV 629
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 41/51 (80%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
+TI KLG +PGDVAWRLYDTYGFPVDLTQLM EEK L +DM+ YE AK
Sbjct: 394 RTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLKIDMDGYEAAK 444
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRYNK 285
LRF QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE +V YN+
Sbjct: 511 LRFE--NQFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEANEFLVDRVYNR 568
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 12/117 (10%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGL-SVDMEVYEDAKK-------- 54
TI ++ +++ L ++ ++ Y L L + +GL SV EVY D +
Sbjct: 645 TIEQVSKTEQLTKEMVYKNVPIYAKESKLA-LAKKIRGLRSVFDEVYPDPVRVISFGVPV 703
Query: 55 -KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ + P+S+AG +TSVEFCGGTHL + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 704 DELEQNPDSEAGEQTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEA 760
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 7/71 (9%)
Query: 265 DEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM---- 320
D + GV + +V LR+ QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G +
Sbjct: 496 DSAYNYGVCN-SKIVALRFENQFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVN 554
Query: 321 --SNKQFVDSV 329
+N+ VD V
Sbjct: 555 DEANEFLVDRV 565
>gi|6176442|gb|AAF05593.1|AF188718_1 alanyl-tRNA synthetase [Drosophila melanogaster]
Length = 966
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 22/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE+ E + N G Y
Sbjct: 516 QFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEAN-EFLVDRVYNRGG--YI 572
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
L I + + TL+VGD+L+LHID RR M NH+ATH LNH
Sbjct: 573 LHIGV-------------------VEGTLKVGDELELHIDVERRWLTMKNHSATHALNHC 613
Query: 444 LRFVLGPEADQKGSLV 459
L VLG + +QKGSLV
Sbjct: 614 LLQVLGKDTEQKGSLV 629
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 41/51 (80%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
+TI KLG +PGDVAWRLYDTYGFPVDLTQLM EEK L +DM+ YE AK
Sbjct: 394 RTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLKIDMDGYEAAK 444
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRYNK 285
LRF QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE +V YN+
Sbjct: 511 LRFE--NQFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEANEFLVDRVYNR 568
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 7/71 (9%)
Query: 265 DEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM---- 320
D + GV + +V LR+ QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G +
Sbjct: 496 DSAYNYGVCN-SKIVALRFENQFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVN 554
Query: 321 --SNKQFVDSV 329
+N+ VD V
Sbjct: 555 DEANEFLVDRV 565
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 50/81 (61%), Gaps = 11/81 (13%)
Query: 40 KGL-SVDMEVYEDAKK---------KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCI 89
+GL SV EVY D + + + P+S+AG +TSVEFCGGTHL + H+ DF I
Sbjct: 680 RGLRSVFDEVYPDPVRVISFGVPVDELEQNPDSEAGEQTSVEFCGGTHLRRSGHIMDFVI 739
Query: 90 SSEEAIAKG-SNIVSYCGSKG 109
SSEEAIAKG IV+ G +
Sbjct: 740 SSEEAIAKGIRRIVALTGPEA 760
>gi|198437569|ref|XP_002125465.1| PREDICTED: similar to alanyl-tRNA synthetase [Ciona intestinalis]
Length = 967
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 85/149 (57%), Gaps = 23/149 (15%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+ + NK FV SVSSG E GILLDK+ FYAEQGGQ++D G+ DE
Sbjct: 508 KAILQNKTFVTSVSSGAECGILLDKTCFYAEQGGQLFDLGYFKKQEDE------------ 555
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
F +F++ N + + V + T++ TL VGD ++L ID RR+ +M NH+
Sbjct: 556 ----------FTEFTVKNCQVQGGYVLHVGTVAGTLEVGDSVELFIDEQRRQSLMKNHSC 605
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
THILN LR VLG EADQ+GSLV L
Sbjct: 606 THILNFGLRCVLG-EADQRGSLVAPNRLR 633
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 3 QTIAKL-GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
Q I L ++KV PG+ AW LYDTYGFP DLT++M EE GL+VD E +E AK +A+
Sbjct: 395 QKIKSLDADAKVFPGETAWLLYDTYGFPFDLTEIMAEESGLTVDCESFEKAKAQAR 450
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQ 324
G V + NK FV SVSSG E GILLDK+ FYAEQGGQ++D G+ ++
Sbjct: 505 GVVKAILQNKTFVTSVSSGAECGILLDKTCFYAEQGGQLFDLGYFKKQE 553
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 33/45 (73%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT 277
NK FV SVSSG E GILLDK+ FYAEQGGQ++D G+ DE T
Sbjct: 513 NKTFVTSVSSGAECGILLDKTCFYAEQGGQLFDLGYFKKQEDEFT 557
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 45/87 (51%), Gaps = 15/87 (17%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + G+SVD V ++P A M TSVE CGGTHL + H
Sbjct: 686 ETYPDPVRVLSV-----GVSVDSLV---------ADPNFDAAMNTSVELCGGTHLLRSGH 731
Query: 84 VGDFCISSEEAIAKG-SNIVSYCGSKG 109
F I SEEAI+KG IV+ G +
Sbjct: 732 ADKFIIISEEAISKGVRRIVAVTGQEA 758
>gi|17861846|gb|AAL39400.1| GM03058p [Drosophila melanogaster]
Length = 966
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 22/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE+ E + N G Y
Sbjct: 516 QFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEAN-EFLVDRVYNRGG--YI 572
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
L I + + TL+VGD+L+LHID RR M NH+ATH LNH
Sbjct: 573 LHIGV-------------------VEGTLKVGDELELHIDVERRWLTMKNHSATHALNHC 613
Query: 444 LRFVLGPEADQKGSLV 459
L VLG + +QKGSLV
Sbjct: 614 LLQVLGKDTEQKGSLV 629
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 41/51 (80%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
+TI KLG +PGDVAWRLYDTYGFPVDLTQLM EEK L +DM+ YE AK
Sbjct: 394 RTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLKIDMDGYEAAK 444
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRYNK 285
LRF QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE +V YN+
Sbjct: 511 LRFE--NQFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEANEFLVDRVYNR 568
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 66/117 (56%), Gaps = 12/117 (10%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGL-SVDMEVYEDAKK-------- 54
TI ++ +++ L ++ ++ Y L L + +GL SV EVY D +
Sbjct: 645 TIEQVSKTEQLTKEMVYKNVPIYAKESKLA-LAKKIRGLRSVFDEVYPDPVRVISFGVPV 703
Query: 55 -KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ + P+S+AG +TSVEFCGGTHL + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 704 DELEQNPDSEAGEQTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEA 760
>gi|195577578|ref|XP_002078646.1| GD22412 [Drosophila simulans]
gi|194190655|gb|EDX04231.1| GD22412 [Drosophila simulans]
Length = 948
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/136 (47%), Positives = 83/136 (61%), Gaps = 22/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE+ E + N G Y
Sbjct: 516 QFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEAN-EFLVDRVYNRGG--YI 572
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
L I + + TL+VGD+L+LHID RR M NH+ATH LNH
Sbjct: 573 LHIGV-------------------VEGTLKVGDELELHIDVERRWLTMKNHSATHALNHC 613
Query: 444 LRFVLGPEADQKGSLV 459
L VLG + +QKGSLV
Sbjct: 614 LLQVLGKDTEQKGSLV 629
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/51 (72%), Positives = 41/51 (80%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
+TI KLG +PGDVAWRLYDTYGFPVDLTQLM EEK L +DM+ YE AK
Sbjct: 394 RTIEKLGNQTTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLKIDMDGYEAAK 444
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRYNK 285
LRF QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G ++ VNDE +V YN+
Sbjct: 511 LRFE--NQFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVNDEANEFLVDRVYNR 568
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%), Gaps = 7/71 (9%)
Query: 265 DEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM---- 320
D + GV + +V LR+ QFV+ ++SG +AGI+LDK+NFYAE GGQIYD+G +
Sbjct: 496 DSAYNYGVCN-SKIVALRFENQFVNEITSGQKAGIVLDKTNFYAESGGQIYDQGALVKVN 554
Query: 321 --SNKQFVDSV 329
+N+ VD V
Sbjct: 555 DEANEFLVDRV 565
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 51/108 (47%), Gaps = 12/108 (11%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGL-SVDMEVYEDAKKKAQSEPES 62
TI ++ +++ L ++ ++ Y L L + +GL SV EVY D + A P S
Sbjct: 645 TIEQVSKTEQLTKEMVYKNVPIYAKESKLA-LAKKIRGLRSVFDEVYPDPVRPANKPPSS 703
Query: 63 QAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
F L + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 704 ---------FAAAPTLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEA 742
>gi|425868835|gb|AFY04547.1| alanyl-tRNA synthetase-like protein, partial [Coboldia fuscipes]
Length = 467
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 80/136 (58%), Gaps = 22/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+FVD V SG G++LDK+NFYAE GGQIYD+G + + DE+
Sbjct: 175 KFVDEVHSGDSCGLVLDKTNFYAESGGQIYDQGVFVKIGDEAN----------------- 217
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+F + + K + + + TL+VGD+L L +D RRR M+NH+ATH+LNH+
Sbjct: 218 -----EFLVDRVYNKGGYILHIGVVEGTLKVGDELSLQLDIIRRRLTMNNHSATHLLNHS 272
Query: 444 LRFVLGPEADQKGSLV 459
L VLGP+ DQKGSLV
Sbjct: 273 LLQVLGPDTDQKGSLV 288
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 44/54 (81%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TI KLG K LPGDVAWRLYDTYGFP+DLTQLM EEK L VDME YE AK+ +
Sbjct: 53 RTIDKLGGVKTLPGDVAWRLYDTYGFPIDLTQLMAEEKNLLVDMEAYEAAKQNS 106
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGT 110
++ P AG++ SVEFCGGTHL + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 366 EANPTGDAGVKNSVEFCGGTHLKRSGHIVDFVISSEEAIAKGIRRIVALTGPEAV 420
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%), Gaps = 2/53 (3%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRYNK 285
+FVD V SG G++LDK+NFYAE GGQIYD+G + + DE +V YNK
Sbjct: 175 KFVDEVHSGDSCGLVLDKTNFYAESGGQIYDQGVFVKIGDEANEFLVDRVYNK 227
>gi|170039921|ref|XP_001847766.1| alanyl-tRNA synthetase [Culex quinquefasciatus]
gi|167863508|gb|EDS26891.1| alanyl-tRNA synthetase [Culex quinquefasciatus]
Length = 967
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 57/138 (41%), Positives = 81/138 (58%), Gaps = 22/138 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N FVD V +G E ++LDK+NFYAE GGQIYD+G+++ VNDES
Sbjct: 515 NNAFVDEVQAGQECAVILDKTNFYAESGGQIYDQGYLLKVNDEST--------------- 559
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F+++ + + V + + LRVGD++ H+D RR+ M NH+ATH LN
Sbjct: 560 -------EFNVNLVYNRGGYVLHIGVVEGVLRVGDEVACHMDVVRRQLTMKNHSATHALN 612
Query: 442 HALRFVLGPEADQKGSLV 459
H+L VLG + DQ+GSLV
Sbjct: 613 HSLLKVLGLDTDQRGSLV 630
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 48/54 (88%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TIAKLG+SKV+PGDVAWRLYDTYGFPVDLT LM EEK +++DME YE AK ++
Sbjct: 395 RTIAKLGDSKVIPGDVAWRLYDTYGFPVDLTGLMAEEKNMTIDMEGYEKAKHQS 448
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV--VGLRY 283
K L YN FVD V +G E ++LDK+NFYAE GGQIYD+G+++ VNDE T V L Y
Sbjct: 508 KVLALRYNNAFVDEVQAGQECAVILDKTNFYAESGGQIYDQGYLLKVNDESTEFNVNLVY 567
Query: 284 NK 285
N+
Sbjct: 568 NR 569
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKK--------- 54
TI ++ E++ L +V + Y L + SV EVY D +
Sbjct: 646 TIEQVAEAERLTREVVKKNMQVYAKESKLASAKAIKGLRSVFDEVYPDPVRVISFGVPVE 705
Query: 55 KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
++ PE AG ETSVEFCGGTHL + H+ DF I++EEAIAKG IV+ G +
Sbjct: 706 DLEANPEGVAGTETSVEFCGGTHLHQSGHMVDFVITTEEAIAKGIRRIVALTGPEA 761
>gi|425868841|gb|AFY04550.1| alanyl-tRNA synthetase-like protein, partial [Tipula abdominalis]
Length = 574
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 83/148 (56%), Gaps = 22/148 (14%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G + +FVD V+SG G++LDK+NFYAE GGQI+D+G + + D+ E ++ N
Sbjct: 170 GLRYDNRFVDEVTSGQICGLILDKTNFYAESGGQIFDQGVFVKIADDGN-EFLVDTVYNR 228
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
G Y L I + + LRVGD+L LH+D RRR M+NH+AT
Sbjct: 229 GG--YILHIGV-------------------VEGVLRVGDELSLHVDVVRRRLTMNNHSAT 267
Query: 438 HILNHALRFVLGPEADQKGSLVYRYHLH 465
H LNH+L VLG + DQKGSLV L
Sbjct: 268 HALNHSLLKVLGSDTDQKGSLVVPEKLR 295
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 46/52 (88%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKK 54
+TIAKLG+ K++PGDVAWRLYDTYGFP+DLT+LM EEK L +DM YE+AK+
Sbjct: 54 RTIAKLGDVKLIPGDVAWRLYDTYGFPIDLTKLMAEEKNLEIDMAGYEEAKQ 105
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 65/117 (55%), Gaps = 12/117 (10%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGL-SVDMEVYEDAKK-------- 54
TI ++ ++ L D++ + Y L ++ + +GL SV EVY D +
Sbjct: 305 TIEQVAATEQLTKDISRKNMKIYAKETSL-KIAKQIQGLRSVFDEVYPDPVRVISFGVDV 363
Query: 55 -KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ PE AG+ETSVEFCGGTHL + H+G+F ISSEEAIAKG IV+ G +
Sbjct: 364 ADLEKNPEGPAGVETSVEFCGGTHLHYSGHIGEFVISSEEAIAKGIRRIVALTGPEA 420
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 40/58 (68%), Gaps = 2/58 (3%)
Query: 230 FSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRYNK 285
Y+ +FVD V+SG G++LDK+NFYAE GGQI+D+G + + D+G +V YN+
Sbjct: 171 LRYDNRFVDEVTSGQICGLILDKTNFYAESGGQIFDQGVFVKIADDGNEFLVDTVYNR 228
>gi|427781113|gb|JAA56008.1| Putative alanyl-trna synthetase translation [Rhipicephalus
pulchellus]
Length = 631
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 63/148 (42%), Positives = 85/148 (57%), Gaps = 23/148 (15%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+NK FVDSV +G + G++LD++NFYAE GGQ D GFM +E
Sbjct: 174 LRTNKTFVDSVEAGHQCGVILDRTNFYAESGGQSCDTGFMTSEENED------------- 220
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
++F+++ + + V + L S TL+VGDKLKL ID RR+ +M+NHT T
Sbjct: 221 ---------VEFAVNEVHVQGGYVIHIGRLGSGTLKVGDKLKLSIDEERRKLLMNNHTGT 271
Query: 438 HILNHALRFVLGPEADQKGSLVYRYHLH 465
H+LN ALR VL EADQ+GSLV L
Sbjct: 272 HVLNFALRQVLTAEADQRGSLVAPDRLR 299
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 43/55 (78%), Positives = 49/55 (89%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+T+ KLG+ K LPGDVAWRLYDTYGFP+DLTQLMVEEKGL+VDME YE AK+ AQ
Sbjct: 57 KTVGKLGDQKFLPGDVAWRLYDTYGFPIDLTQLMVEEKGLAVDMESYEKAKQAAQ 111
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 52/88 (59%), Gaps = 15/88 (17%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + G+ V+ E+ ED P S AG TSVEFCGGTHL A H
Sbjct: 352 ETYPDPVRVVSI-----GIPVE-ELLED--------PSSPAGSITSVEFCGGTHLKRAGH 397
Query: 84 VGDFCISSEEAIAKG-SNIVSYCGSKGT 110
VGDF IS+EEAIAKG IV+ G + T
Sbjct: 398 VGDFVISTEEAIAKGIRRIVALTGPEAT 425
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
L NK FVDSV +G + G++LD++NFYAE GGQ D GFM +E
Sbjct: 172 LVLRTNKTFVDSVEAGHQCGVILDRTNFYAESGGQSCDTGFMTSEENE 219
>gi|156371401|ref|XP_001628752.1| predicted protein [Nematostella vectensis]
gi|156215737|gb|EDO36689.1| predicted protein [Nematostella vectensis]
Length = 961
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 81/149 (54%), Gaps = 23/149 (15%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+ + K+FV+ V G GI+LD+++FYAEQGGQIYDEGFM DE
Sbjct: 506 KALLHEKEFVNEVPGGEHCGIILDQTSFYAEQGGQIYDEGFMTKEGDED----------- 554
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
++F + N++ V + L +RVGD + ID RRR M+NHTA
Sbjct: 555 -----------VEFRVINVQVHGGYVLHVGALEGAIRVGDTMNCLIDEDRRRQCMNNHTA 603
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
THILN ALR LG EADQ+GSLV L
Sbjct: 604 THILNFALRRTLG-EADQRGSLVAPNRLR 631
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/45 (77%), Positives = 41/45 (91%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+PGDVAWRLYDTYGFPVDLT+LM EE+GL VDME YE+AK++AQ
Sbjct: 403 TIPGDVAWRLYDTYGFPVDLTELMAEERGLRVDMEKYEEAKRRAQ 447
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 37/48 (77%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
GT+ L + K+FV+ V G GI+LD+++FYAEQGGQIYDEGFM+ +
Sbjct: 503 GTIKALLHEKEFVNEVPGGEHCGIILDQTSFYAEQGGQIYDEGFMTKE 550
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 33/44 (75%)
Query: 232 YNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
+ K+FV+ V G GI+LD+++FYAEQGGQIYDEGFM DE
Sbjct: 510 HEKEFVNEVPGGEHCGIILDQTSFYAEQGGQIYDEGFMTKEGDE 553
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P QAG + S+EFCGGTHL + H+ F + SEEAI+KG IV+ G +G
Sbjct: 703 QPNPQAGYKYSIEFCGGTHLQRSSHMETFVLVSEEAISKGIRRIVALTGPEG 754
>gi|425868850|gb|AFY04554.1| alanyl-tRNA synthetase-like protein, partial [Exeretonevra
angustifrons]
Length = 450
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 63/138 (45%), Positives = 80/138 (57%), Gaps = 22/138 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N FV+ V+SG + G++LDK+NFYAE GGQI+D+G M+ V DES E + N G
Sbjct: 174 NNNFVNEVTSGQKCGVILDKTNFYAESGGQIFDQGVMVKVGDES-TEFLVDRVYNRGG-- 230
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
Y L I + L L+VGD++ L ID RRR M+NH+ATH LN
Sbjct: 231 YILHIGIVEGL-------------------LQVGDEVNLQIDVVRRRLTMNNHSATHALN 271
Query: 442 HALRFVLGPEADQKGSLV 459
H L VLG + DQKGSLV
Sbjct: 272 HCLLQVLGKDTDQKGSLV 289
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 47/54 (87%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TI KLG++KV+PGDVAWRLYDTYGFP+DLTQLM EEK L +DME YE AK+ +
Sbjct: 54 RTITKLGDAKVIPGDVAWRLYDTYGFPIDLTQLMAEEKQLEIDMEGYEQAKQNS 107
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 10/116 (8%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKK--------- 54
TI ++ +++ L ++ ++ Y LT+ + SV EVY D +
Sbjct: 305 TIEQIAQTEELTKEMVYKNMPIYAKESSLTKARSIKGLRSVFDEVYPDPVRVISFGVPVD 364
Query: 55 KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ ++ PE AG TSVEFCGGTHL + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 365 ELENNPEGDAGENTSVEFCGGTHLQRSGHIVDFVISSEEAIAKGIRRIVALTGPEA 420
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRY 283
K + YN FV+ V+SG + G++LDK+NFYAE GGQI+D+G M+ V DE T +V Y
Sbjct: 167 KVVALRYNNNFVNEVTSGQKCGVILDKTNFYAESGGQIFDQGVMVKVGDESTEFLVDRVY 226
Query: 284 NK 285
N+
Sbjct: 227 NR 228
>gi|125987341|ref|XP_001357433.1| GA12250 [Drosophila pseudoobscura pseudoobscura]
gi|54645764|gb|EAL34502.1| GA12250 [Drosophila pseudoobscura pseudoobscura]
Length = 966
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 82/136 (60%), Gaps = 22/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
QFV+ +S+G +AGI+LDK+NFYAE GGQI+D+G ++ +NDE+
Sbjct: 516 QFVNEISNGQKAGIVLDKTNFYAESGGQIFDQGALVKLNDEAN----------------- 558
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+F + + + + + + TL+VGD+L+LHID RR M NH+ATH LNH
Sbjct: 559 -----EFLVDRVYNRGGYILHIGVVEGTLKVGDELQLHIDEERRWLTMKNHSATHALNHC 613
Query: 444 LRFVLGPEADQKGSLV 459
L VLG + +QKGSLV
Sbjct: 614 LLQVLGKDTEQKGSLV 629
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 43/54 (79%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TI KLG ++PGDVAWRLYDTYGFPVDLTQLM EEK L +DM YE AK+ +
Sbjct: 394 RTIEKLGSQSIIPGDVAWRLYDTYGFPVDLTQLMAEEKSLEIDMAGYEAAKQNS 447
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 12/117 (10%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGL-SVDMEVYEDAKK-------- 54
TI ++ +++ L D+ ++ Y L L +GL SV EVY D +
Sbjct: 645 TIEQVAKTEQLTKDMVYKNVPIYAKESKLA-LAKRIRGLRSVFDEVYPDPVRVISFGVPV 703
Query: 55 -KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ + P+++AG +TSVEFCGGTHL + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 704 DELEQNPDAEAGEQTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEA 760
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 44/60 (73%), Gaps = 4/60 (6%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRYNK 285
LRF QFV+ +S+G +AGI+LDK+NFYAE GGQI+D+G ++ +NDE +V YN+
Sbjct: 511 LRFE--NQFVNEISNGQKAGIVLDKTNFYAESGGQIFDQGALVKLNDEANEFLVDRVYNR 568
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 6/58 (10%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM------SNKQFVDSV 329
+V LR+ QFV+ +S+G +AGI+LDK+NFYAE GGQI+D+G + +N+ VD V
Sbjct: 508 IVALRFENQFVNEISNGQKAGIVLDKTNFYAESGGQIFDQGALVKLNDEANEFLVDRV 565
>gi|195155623|ref|XP_002018701.1| GL25810 [Drosophila persimilis]
gi|194114854|gb|EDW36897.1| GL25810 [Drosophila persimilis]
Length = 966
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 82/136 (60%), Gaps = 22/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
QFV+ +S+G +AGI+LDK+NFYAE GGQI+D+G ++ +NDE+
Sbjct: 516 QFVNEISNGQKAGIVLDKTNFYAESGGQIFDQGALVKLNDEAN----------------- 558
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+F + + + + + + TL+VGD+L+LHID RR M NH+ATH LNH
Sbjct: 559 -----EFLVDRVYNRGGYILHIGVVEGTLKVGDELQLHIDEERRWLTMKNHSATHALNHC 613
Query: 444 LRFVLGPEADQKGSLV 459
L VLG + +QKGSLV
Sbjct: 614 LLQVLGKDTEQKGSLV 629
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 43/54 (79%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TI KLG ++PGDVAWRLYDTYGFPVDLTQLM EEK L +DM YE AK+ +
Sbjct: 394 RTIEKLGSQSIIPGDVAWRLYDTYGFPVDLTQLMAEEKSLEIDMAGYEAAKQNS 447
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 12/117 (10%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGL-SVDMEVYEDAKK-------- 54
TI ++ +++ L D+ ++ Y L L +GL SV EVY D +
Sbjct: 645 TIEQVAKTEQLTKDMVYKNVPIYAKESKLA-LAKRIRGLRSVFDEVYPDPVRVISFGVPV 703
Query: 55 -KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ + P+++AG +TSVEFCGGTHL + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 704 DELEQNPDAEAGEQTSVEFCGGTHLRRSGHIMDFVISSEEAIAKGIRRIVALTGPEA 760
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRY 283
K + + QFV+ +S+G +AGI+LDK+NFYAE GGQI+D+G ++ +NDE +V Y
Sbjct: 507 KIVALRFENQFVNEISNGQKAGIVLDKTNFYAESGGQIFDQGALVKLNDEANEFLVDRVY 566
Query: 284 NK 285
N+
Sbjct: 567 NR 568
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 6/58 (10%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM------SNKQFVDSV 329
+V LR+ QFV+ +S+G +AGI+LDK+NFYAE GGQI+D+G + +N+ VD V
Sbjct: 508 IVALRFENQFVNEISNGQKAGIVLDKTNFYAESGGQIFDQGALVKLNDEANEFLVDRV 565
>gi|167518337|ref|XP_001743509.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778608|gb|EDQ92223.1| predicted protein [Monosiga brevicollis MX1]
Length = 1000
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 81/239 (33%), Positives = 118/239 (49%), Gaps = 52/239 (21%)
Query: 245 EAGILLDKSNFYA---------EQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGT 295
E G+ +D+ F A + G ++ EG + V+D +K D +++
Sbjct: 431 ERGLTVDEKTFEAAREEAVKVSQMGKKMAIEGIDLDVHD--------LDKLKADGIAATD 482
Query: 296 EA-----GILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA---GILLDKSNFYAE 347
++ G++ D S + + ++ + FVDS+ ++ G++LD++NFYAE
Sbjct: 483 DSFKYDYGLVGDNSYEFKDLEAKVV--ALRTESGFVDSLDGSDDSVNVGVVLDRTNFYAE 540
Query: 348 QGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHT 407
QGGQ YD GF N E L F++ +++KK +
Sbjct: 541 QGGQTYDTGFFRDANGE-----------------------LDFTVMDVQKKGPYCLHIGV 577
Query: 408 LSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
LS+ TL+VGD L L D RRRP MSNHTATH+LN ALR VLG EADQKGSLV L
Sbjct: 578 LSNGTLKVGDTLTLSFDVERRRPCMSNHTATHVLNFALRKVLG-EADQKGSLVEPERLR 635
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%), Gaps = 2/71 (2%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+ Q A V+ G VAW+L+ TYGFPVDLT++M EE+GL+VD + +E A+++A
Sbjct: 393 LFQRAADKATDGVIDGHVAWQLWGTYGFPVDLTKVMAEERGLTVDEKTFEAAREEAVK-- 450
Query: 61 ESQAGMETSVE 71
SQ G + ++E
Sbjct: 451 VSQMGKKMAIE 461
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 29/43 (67%), Gaps = 3/43 (6%)
Query: 236 FVDSVSSGTEA---GILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
FVDS+ ++ G++LD++NFYAEQGGQ YD GF N E
Sbjct: 515 FVDSLDGSDDSVNVGVVLDRTNFYAEQGGQTYDTGFFRDANGE 557
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 54 KKAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG-TF 111
K +P S+ + S+EFCGGTH+ + + F I +EEAI+KG IV+ GS+
Sbjct: 704 KDVLDDPVSEVALANSIEFCGGTHVKNSGDIVQFAILNEEAISKGIRRIVAVTGSEARKA 763
Query: 112 QSHSGSINDEM 122
Q+ + ++ E+
Sbjct: 764 QTEANRLDAEV 774
>gi|157115817|ref|XP_001658296.1| alanyl-tRNA synthetase [Aedes aegypti]
gi|108883466|gb|EAT47691.1| AAEL001218-PA [Aedes aegypti]
Length = 966
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 82/142 (57%), Gaps = 22/142 (15%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
+N FVD V +G E ++LDK+NFYAE GGQIYD+G+++ V DES
Sbjct: 510 ALRANNIFVDEVQAGQECAVILDKTNFYAESGGQIYDQGYLVKVGDEST----------- 558
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
+F+++ + + + + + LRVGD++ H+DT RR+ M NH+AT
Sbjct: 559 -----------EFNVNLVYNRGGYIIHIGVVEGILRVGDEVACHMDTLRRQLTMKNHSAT 607
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H LNH+L VLG + DQ+GSLV
Sbjct: 608 HALNHSLLKVLGLDTDQRGSLV 629
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 47/51 (92%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
+TIAKLG+SKV+PGDVAWRLYDTYGFP+DLTQLM EEK +++DME YE AK
Sbjct: 395 RTIAKLGDSKVIPGDVAWRLYDTYGFPIDLTQLMAEEKNMTIDMEGYEKAK 445
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV--VGLRY 283
K L N FVD V +G E ++LDK+NFYAE GGQIYD+G+++ V DE T V L Y
Sbjct: 507 KVLALRANNIFVDEVQAGQECAVILDKTNFYAESGGQIYDQGYLVKVGDESTEFNVNLVY 566
Query: 284 NK 285
N+
Sbjct: 567 NR 568
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 64/117 (54%), Gaps = 12/117 (10%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGL-SVDMEVYEDAKK-------- 54
T+ ++ ES+ L +V + Y L+ + KGL SV EVY D +
Sbjct: 645 TVEQVAESERLTREVVKKNMQIYAKESKLS-VAKSIKGLRSVFDEVYPDPVRVISFGVPV 703
Query: 55 -KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
++ PE + G+ETSVEFCGGTHL + H+ DF I++EEAIAKG IV+ G +
Sbjct: 704 ENLEANPEGEEGVETSVEFCGGTHLHQSGHMWDFVITTEEAIAKGIRRIVALTGPEA 760
>gi|196003434|ref|XP_002111584.1| hypothetical protein TRIADDRAFT_23916 [Trichoplax adhaerens]
gi|190585483|gb|EDV25551.1| hypothetical protein TRIADDRAFT_23916 [Trichoplax adhaerens]
Length = 959
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/223 (34%), Positives = 112/223 (50%), Gaps = 35/223 (15%)
Query: 245 EAGILLDKSNF-YAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDK 303
E G+ +D + A+Q Q G GV+D +G+ K D T+ K
Sbjct: 431 EKGLSIDMDGYEKAKQDSQELSRGKDTGVDDT-VALGIHAIKDLEDLAIPLTDTS---PK 486
Query: 304 SNFYAEQGGQIYDEGFMSN-------KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 356
N+ ++ G G + K FV+ V +G+ GI+LDKS FYAEQGGQIYD G
Sbjct: 487 YNYESDGNGGYTIHGIAAKISALRYEKSFVNEVLTGSRCGIILDKSCFYAEQGGQIYDLG 546
Query: 357 FMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGD 416
F++ +DE +F +++++ V + T +VGD
Sbjct: 547 FIVNSDDEDT----------------------EFKVTDVQIMGGYVLHVGITEGTFKVGD 584
Query: 417 KLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
++L +D+ RRR +M+NHTATHILN ALR LG EADQ+GSLV
Sbjct: 585 TVQLQVDSERRRTVMNNHTATHILNFALREQLG-EADQRGSLV 626
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/59 (64%), Positives = 45/59 (76%), Gaps = 3/59 (5%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVE 71
VLPG VAWRLYDTYGFPVDLT +M EEKGLS+DM+ YE AK+ +Q E G +T V+
Sbjct: 405 VLPGFVAWRLYDTYGFPVDLTHIMAEEKGLSIDMDGYEKAKQDSQ---ELSRGKDTGVD 460
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/48 (58%), Positives = 35/48 (72%)
Query: 230 FSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT 277
Y K FV+ V +G+ GI+LDKS FYAEQGGQIYD GF++ +DE T
Sbjct: 509 LRYEKSFVNEVLTGSRCGIILDKSCFYAEQGGQIYDLGFIVNSDDEDT 556
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 49/85 (57%), Gaps = 15/85 (17%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + G+SVD ++ ED P +G++TSVEFCGGTHL +
Sbjct: 685 ETYPDPVRIVSV-----GVSVD-DLLED--------PTGPSGLKTSVEFCGGTHLKNSGD 730
Query: 84 VGDFCISSEEAIAKG-SNIVSYCGS 107
+ F ISSEE IAKG I++ GS
Sbjct: 731 MEAFVISSEEPIAKGIRRIIALTGS 755
>gi|195438477|ref|XP_002067163.1| GK24844 [Drosophila willistoni]
gi|194163248|gb|EDW78149.1| GK24844 [Drosophila willistoni]
Length = 967
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/136 (46%), Positives = 79/136 (58%), Gaps = 22/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
QFV S+S+G +AGI+LD +NFYAE GGQIYD+G ++ NDE+ E + N G Y
Sbjct: 517 QFVQSISNGQKAGIVLDNTNFYAESGGQIYDQGALVKANDEAN-EFLVDRVYNRGG--YI 573
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
L I + + TL VGD L+LHID RR M NH+ATH LNH
Sbjct: 574 LHIGV-------------------VEGTLAVGDDLQLHIDVTRRWLTMKNHSATHALNHC 614
Query: 444 LRFVLGPEADQKGSLV 459
L VLG + +QKGSLV
Sbjct: 615 LLQVLGKDTEQKGSLV 630
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 45/55 (81%), Gaps = 1/55 (1%)
Query: 3 QTIAKLG-ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TI KLG + K++PGDVAWRLYDTYGFPVDLTQLM EEK L +DM YE AK+ +
Sbjct: 394 RTIEKLGADQKIIPGDVAWRLYDTYGFPVDLTQLMAEEKSLEIDMAGYEAAKQNS 448
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRY 283
K L + QFV S+S+G +AGI+LD +NFYAE GGQIYD+G ++ NDE +V Y
Sbjct: 508 KILAIRFENQFVQSISNGQKAGIVLDNTNFYAESGGQIYDQGALVKANDEANEFLVDRVY 567
Query: 284 NK 285
N+
Sbjct: 568 NR 569
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 48/81 (59%), Gaps = 11/81 (13%)
Query: 40 KGL-SVDMEVYEDAKK---------KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCI 89
+GL SV EVY D + + + +P +AG TSVEFCGGTHL + H+ DF I
Sbjct: 681 RGLRSVFDEVYPDPVRVISFGVPVEQLEEQPNGEAGDNTSVEFCGGTHLRRSGHIMDFVI 740
Query: 90 SSEEAIAKG-SNIVSYCGSKG 109
SSEEAIAKG IV+ G +
Sbjct: 741 SSEEAIAKGIRRIVALTGPEA 761
>gi|195397897|ref|XP_002057564.1| GJ18196 [Drosophila virilis]
gi|194141218|gb|EDW57637.1| GJ18196 [Drosophila virilis]
Length = 967
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 80/136 (58%), Gaps = 22/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+FV +SSG +AGI+LDK+NFYAE GGQIYD+G ++ +NDE+
Sbjct: 517 KFVQEISSGQKAGIVLDKTNFYAESGGQIYDQGALVKLNDEAN----------------- 559
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+F + + + + + + TL VGD+++LHID RR M NH+ATH LNH
Sbjct: 560 -----EFLVDRVYNRGGYILHIGVVEGTLAVGDEVQLHIDAERRWLTMKNHSATHALNHC 614
Query: 444 LRFVLGPEADQKGSLV 459
L VLG + +QKGSLV
Sbjct: 615 LLQVLGKDTEQKGSLV 630
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 36/55 (65%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Query: 3 QTIAKLGESKV-LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TI KLG ++ +PGDVAWRLYDTYGFPVDLTQLM EEK L +DM Y+ AK+ +
Sbjct: 394 RTIEKLGANQTTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLQIDMAGYDAAKQNS 448
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 12/117 (10%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGL-SVDMEVYEDAKK-------- 54
TI ++ +++ L D+ ++ Y L L +GL SV EVY D +
Sbjct: 646 TIEQVAKTEQLTRDMVYKNMPIYAKESQLA-LAKRIRGLRSVFDEVYPDPVRVISFGVPV 704
Query: 55 -KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ +++P+++AG +TSVEFCGGTHL + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 705 DQLEAQPDAEAGEQTSVEFCGGTHLRNSGHIMDFVISSEEAIAKGIRRIVALTGPEA 761
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRY 283
K + Y +FV +SSG +AGI+LDK+NFYAE GGQIYD+G ++ +NDE +V Y
Sbjct: 508 KIVALRYENKFVQEISSGQKAGIVLDKTNFYAESGGQIYDQGALVKLNDEANEFLVDRVY 567
Query: 284 NK 285
N+
Sbjct: 568 NR 569
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 6/58 (10%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM------SNKQFVDSV 329
+V LRY +FV +SSG +AGI+LDK+NFYAE GGQIYD+G + +N+ VD V
Sbjct: 509 IVALRYENKFVQEISSGQKAGIVLDKTNFYAESGGQIYDQGALVKLNDEANEFLVDRV 566
>gi|195033960|ref|XP_001988798.1| GH11356 [Drosophila grimshawi]
gi|193904798|gb|EDW03665.1| GH11356 [Drosophila grimshawi]
Length = 967
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 79/136 (58%), Gaps = 22/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+FV +SSG +AGI+LDK+NFYAE GGQIYD+G ++ +NDE+
Sbjct: 517 KFVQEISSGQKAGIVLDKTNFYAESGGQIYDQGVLVKLNDEAN----------------- 559
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+F + + + + + + L VGD+L+LHID RR M NH+ATH LNH
Sbjct: 560 -----EFLVDRVYNRGGYILHIGVVEGNLAVGDELQLHIDVERRWLTMKNHSATHALNHC 614
Query: 444 LRFVLGPEADQKGSLV 459
L VLG + +QKGSLV
Sbjct: 615 LLQVLGKDTEQKGSLV 630
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/55 (69%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Query: 3 QTIAKLGESKV-LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TI KLG S+ +PGDVAWRLYDTYGFPVDLTQLM EEK L +DM YE AK+ +
Sbjct: 394 RTIEKLGTSQTTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLQIDMAGYEAAKQNS 448
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 65/117 (55%), Gaps = 12/117 (10%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGL-SVDMEVYEDAKK-------- 54
TI ++ ++ L D+ ++ Y L L +GL SV EVY D +
Sbjct: 646 TIDQVARTEKLTRDMVYQNMPIYAKESQLA-LAKRIRGLRSVFDEVYPDPVRVISFGVPV 704
Query: 55 -KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ +S+P+++ G +TSVEFCGGTHL + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 705 DRLESQPDAETGEQTSVEFCGGTHLRNSGHIMDFVISSEEAIAKGIRRIVALTGPEA 761
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRY 283
K + + +FV +SSG +AGI+LDK+NFYAE GGQIYD+G ++ +NDE +V Y
Sbjct: 508 KIVALRFENKFVQEISSGQKAGIVLDKTNFYAESGGQIYDQGVLVKLNDEANEFLVDRVY 567
Query: 284 NK 285
N+
Sbjct: 568 NR 569
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 6/58 (10%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM------SNKQFVDSV 329
+V LR+ +FV +SSG +AGI+LDK+NFYAE GGQIYD+G + +N+ VD V
Sbjct: 509 IVALRFENKFVQEISSGQKAGIVLDKTNFYAESGGQIYDQGVLVKLNDEANEFLVDRV 566
>gi|425868844|gb|AFY04551.1| alanyl-tRNA synthetase-like protein, partial [Bombylius major]
Length = 572
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 84/154 (54%), Gaps = 24/154 (15%)
Query: 312 GQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWF 371
GQI F N FV+ V+SG + G++LDK+NFYAE GGQIYD+G ++ + DE E
Sbjct: 166 GQILALRF--NNSFVNEVTSGQKCGVILDKTNFYAESGGQIYDQGVLVKIGDED-TEFLV 222
Query: 372 SSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIM 431
+ N G Y L I + + TL++GD++ + D RRR M
Sbjct: 223 DRVYNKGG--YILHIGV-------------------VEGTLKIGDEVNMQFDVVRRRLTM 261
Query: 432 SNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
+NH+ATH LNH L VLG + DQKGSLV L
Sbjct: 262 NNHSATHALNHCLLQVLGKDTDQKGSLVVPEKLR 295
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/51 (78%), Positives = 46/51 (90%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
+TIAKLG++K+LPGDVAWRLYDTYGFPVDLTQLM EEK L +DM+ YE AK
Sbjct: 54 RTIAKLGDTKILPGDVAWRLYDTYGFPVDLTQLMAEEKXLQIDMDGYEKAK 104
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%), Gaps = 2/60 (3%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRYNK 285
L +N FV+ V+SG + G++LDK+NFYAE GGQIYD+G ++ + DE T +V YNK
Sbjct: 169 LALRFNNSFVNEVTSGQKCGVILDKTNFYAESGGQIYDQGVLVKIGDEDTEFLVDRVYNK 228
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 65/119 (54%), Gaps = 16/119 (13%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEE--KGL-SVDMEVYEDAKK------ 54
+I ++ +++ L D+ ++ Y +QL V + +GL SV EVY D +
Sbjct: 305 SIEQIAKTEQLARDIVFKNVPIYA---KESQLSVAKTIRGLRSVFDEVYPDPVRVISFGV 361
Query: 55 ---KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ P+S G +TSVEFCGGTHL + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 362 PVEDLEKNPDSDVGEKTSVEFCGGTHLKRSGHIVDFIISSEEAIAKGIRRIVALTGPEA 420
>gi|193656980|ref|XP_001950431.1| PREDICTED: alanyl-tRNA synthetase, cytoplasmic-like [Acyrthosiphon
pisum]
Length = 955
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 82/137 (59%), Gaps = 25/137 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
QFV+ V + E GI+LDK+ FYAEQGGQIYD+G M V DE
Sbjct: 515 QFVNEVDTFQECGIILDKTCFYAEQGGQIYDQGSM--VKDE------------------- 553
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +F ++N++ + + + L S +L+VGDK+ L ID RRR +M+NHTATH LNH
Sbjct: 554 ---FTEFYVNNVQLRGGYILHVGILESGSLKVGDKVVLKIDEKRRRFVMNNHTATHTLNH 610
Query: 443 ALRFVLGPEADQKGSLV 459
LR VLG +QKGSLV
Sbjct: 611 TLRVVLGDNLNQKGSLV 627
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/68 (63%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+TI KL + KV+PG+VAW+LYDTYGFPVDLT LMVEEKG ++DME YE+AKKKAQ ++
Sbjct: 394 RTILKLTD-KVIPGEVAWKLYDTYGFPVDLTYLMVEEKGFTIDMEAYEEAKKKAQLISQN 452
Query: 63 QAGMETSV 70
+ G + V
Sbjct: 453 KVGGDKEV 460
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 56/103 (54%), Gaps = 9/103 (8%)
Query: 55 KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQS 113
K ++PE +G+ETSVEFCGGTHL H+ F I SEEAI+KG IV+ G + T
Sbjct: 703 KLLTDPEGNSGLETSVEFCGGTHLHKTGHMECFTILSEEAISKGIRRIVAVTGPEATKAY 762
Query: 114 HSGSINDEMVNKYPSLYRLFRTVHKQKYV---QDALNVSCLSF 153
+ G + V K S + V+ K + QD +N S + +
Sbjct: 763 NRGEELKKDVMKLDS-----KDVNLSKAIIDTQDKINKSVIPY 800
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 29/36 (80%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
QFV+ V + E GI+LDK+ FYAEQGGQIYD+G M+
Sbjct: 515 QFVNEVDTFQECGIILDKTCFYAEQGGQIYDQGSMV 550
>gi|389611621|dbj|BAM19402.1| alanyl-tRNA synthetase [Papilio xuthus]
Length = 442
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 75/123 (60%), Gaps = 22/123 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
NK+FV V SG E G++LD++NFYAEQGGQI+DEG+M+ ++D+S
Sbjct: 341 ALRCNKEFVSEVQSGQECGLILDRTNFYAEQGGQIFDEGYMVKMDDDS------------ 388
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
++F++ N++ K V + TL+VGDK+ LHIDT RRR IM+NHT T
Sbjct: 389 ----------VEFTVKNVQVKGGYVLHSGKVEGTLKVGDKVSLHIDTERRRLIMNNHTGT 438
Query: 438 HIL 440
HIL
Sbjct: 439 HIL 441
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 51/63 (80%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+TI KL SK++PGDVAWRLYDTYGFPVDLT LM EEKGLS+DME YE AKK++Q +
Sbjct: 225 RTIEKLSGSKIIPGDVAWRLYDTYGFPVDLTHLMCEEKGLSIDMEAYEKAKKESQLNSQG 284
Query: 63 QAG 65
+A
Sbjct: 285 KAA 287
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/45 (64%), Positives = 37/45 (82%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
TV+ LR NK+FV V SG E G++LD++NFYAEQGGQI+DEG+M
Sbjct: 337 ATVLALRCNKEFVSEVQSGQECGLILDRTNFYAEQGGQIFDEGYM 381
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/48 (56%), Positives = 38/48 (79%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
L NK+FV V SG E G++LD++NFYAEQGGQI+DEG+M+ ++D+
Sbjct: 340 LALRCNKEFVSEVQSGQECGLILDRTNFYAEQGGQIFDEGYMVKMDDD 387
>gi|425868852|gb|AFY04555.1| alanyl-tRNA synthetase-like protein, partial [Hermetia illucens]
Length = 574
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 60/135 (44%), Positives = 79/135 (58%), Gaps = 22/135 (16%)
Query: 325 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYAL 384
FVD V +G + G++LDK+NFYAE GGQI+D+G ++ V DE E + + N G Y L
Sbjct: 177 FVDEVHAGQKCGLVLDKTNFYAESGGQIFDQGVLVKVGDEG-TEFFVDKVYNRGG--YIL 233
Query: 385 PIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
I + + TL+VGD+L L +D RRR M+NH+ATH LNH L
Sbjct: 234 HIGV-------------------VEGTLKVGDELNLQVDWIRRRLTMNNHSATHALNHCL 274
Query: 445 RFVLGPEADQKGSLV 459
VLG + DQKGSLV
Sbjct: 275 LEVLGKDTDQKGSLV 289
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 50/54 (92%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TIAKLG++KVLPGDVAWRLYDTYGFP+DLTQLM EEKGL +DM YE+AK+K+
Sbjct: 54 RTIAKLGDAKVLPGDVAWRLYDTYGFPIDLTQLMAEEKGLQIDMAGYEEAKQKS 107
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ P+ AG +TSVEFCGGTHL + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 367 EKNPQGDAGEKTSVEFCGGTHLQRSGHIVDFVISSEEAIAKGIRRIVALTGPEA 420
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 34/42 (80%)
Query: 236 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT 277
FVD V +G + G++LDK+NFYAE GGQI+D+G ++ V DEGT
Sbjct: 177 FVDEVHAGQKCGLVLDKTNFYAESGGQIFDQGVLVKVGDEGT 218
>gi|17506981|ref|NP_491281.1| Protein AARS-2 [Caenorhabditis elegans]
gi|74955985|sp|O01541.1|SYAC_CAEEL RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
Full=AlaRS A; AltName: Full=Alanyl-tRNA synthetase
gi|351062273|emb|CCD70212.1| Protein AARS-2 [Caenorhabditis elegans]
Length = 968
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 81/136 (59%), Gaps = 23/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+FVD +++G E ILLD++NFYAEQGGQIYD G + VNDES
Sbjct: 518 KFVDQLAAGEEGAILLDRTNFYAEQGGQIYDVGVLTKVNDESN----------------- 560
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+F++SN + + + L+ + + VGD++ D R++ IM NHT TH+LN+A
Sbjct: 561 -----EFNVSNCQVRGGYIVLVGSAEGSFSVGDQVNERFDEDRKQLIMKNHTGTHVLNYA 615
Query: 444 LRFVLGPEADQKGSLV 459
LR VL ++DQKGSLV
Sbjct: 616 LRKVLA-DSDQKGSLV 630
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/43 (74%), Positives = 37/43 (86%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
PGDV+WRLYDTYGFP DLTQLM EEKGLSVD +E+A++KA
Sbjct: 407 FPGDVSWRLYDTYGFPADLTQLMAEEKGLSVDNTAFEEARRKA 449
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 211 TGLGDLSQTKHTPFV-KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
TG G + K P V K L + +FVD +++G E ILLD++NFYAEQGGQIYD G +
Sbjct: 493 TGEGSDAVYKFEPCVGKILAIRRDGKFVDQLAAGEEGAILLDRTNFYAEQGGQIYDVGVL 552
Query: 270 IGVNDE 275
VNDE
Sbjct: 553 TKVNDE 558
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 60 PESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
P+++ G T+VEFCGGTHL H+G I+SEEAIAKG IV+ G +
Sbjct: 711 PDAEEGQNTTVEFCGGTHLQNVSHIGRIVIASEEAIAKGIRRIVALTGPEA 761
>gi|449674132|ref|XP_002160302.2| PREDICTED: alanine--tRNA ligase, cytoplasmic-like [Hydra
magnipapillata]
Length = 997
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 88/138 (63%), Gaps = 25/138 (18%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
NKQFVD V++G + G+LLD+++FYAEQGGQ++D G+ I + +E
Sbjct: 547 NKQFVDEVTNG-KCGVLLDRTSFYAEQGGQLFDTGY-INLGEE----------------- 587
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
++F++++++ V + L TL+VGDK+ ID +RRR +M+NHTATH+LN
Sbjct: 588 ------VEFAVNDVQIHGGYVLHVGNLVGTLKVGDKVTCSIDESRRRSLMNNHTATHLLN 641
Query: 442 HALRFVLGPEADQKGSLV 459
ALR VL +ADQ+GSLV
Sbjct: 642 FALRKVLVDDADQRGSLV 659
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/45 (66%), Positives = 34/45 (75%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
++ GD+AWRLYDTYGFP DLT LM EE+ L VDM YE K KAQ
Sbjct: 440 IIAGDLAWRLYDTYGFPSDLTILMAEERNLKVDMVGYEVLKAKAQ 484
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
E V LR NKQFVD V++G + G+LLD+++FYAEQGGQ++D G+++
Sbjct: 538 EAIVTALRVNKQFVDEVTNG-KCGVLLDRTSFYAEQGGQLFDTGYIN 583
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/48 (60%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 61 ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGS 107
+ QAG +TSVEFCGGTHL V +F I SEEAI+KG IVS GS
Sbjct: 739 DPQAGYKTSVEFCGGTHLKSTGDVVEFAIVSEEAISKGIRRIVSLTGS 786
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 33/37 (89%), Gaps = 1/37 (2%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
NKQFVD V++G + G+LLD+++FYAEQGGQ++D G++
Sbjct: 547 NKQFVDEVTNG-KCGVLLDRTSFYAEQGGQLFDTGYI 582
>gi|195115683|ref|XP_002002386.1| GI12987 [Drosophila mojavensis]
gi|193912961|gb|EDW11828.1| GI12987 [Drosophila mojavensis]
Length = 967
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 81/136 (59%), Gaps = 22/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+FV ++SG +AGI+LDK+NFYAE GGQI+D+G ++ +NDE+ E + N G Y
Sbjct: 517 KFVQEITSGQKAGIVLDKTNFYAESGGQIFDQGALVKLNDEAN-EFLVDRVYNRGG--YI 573
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
L I + + TL VGD+++LHID RR M NH+ATH LNH
Sbjct: 574 LHIGV-------------------VEGTLAVGDEVQLHIDVERRWLTMKNHSATHALNHC 614
Query: 444 LRFVLGPEADQKGSLV 459
L VLG + +QKGSLV
Sbjct: 615 LLQVLGKDTEQKGSLV 630
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 43/52 (82%), Gaps = 1/52 (1%)
Query: 3 QTIAKLG-ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
+TI KLG + K +PGDVAWRLYDTYGFPVDLTQLM EEK L +DM+ Y+ AK
Sbjct: 394 RTIEKLGADQKTIPGDVAWRLYDTYGFPVDLTQLMAEEKSLQIDMDGYDAAK 445
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 67/117 (57%), Gaps = 12/117 (10%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGL-SVDMEVYEDAKK-------- 54
TI ++ +++ L D+ ++ Y L L +GL SV EVY D +
Sbjct: 646 TIEQVAKTEQLTRDMVYKEMPIYAKESQLA-LAKRIRGLRSVFDEVYPDPVRVISFGVPV 704
Query: 55 -KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ +S+P+S+AG +TSVEFCGGTHL + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 705 DQLESQPDSEAGEQTSVEFCGGTHLRNSGHIMDFVISSEEAIAKGIRRIVALTGPEA 761
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRY 283
K + Y +FV ++SG +AGI+LDK+NFYAE GGQI+D+G ++ +NDE +V Y
Sbjct: 508 KIVALRYENKFVQEITSGQKAGIVLDKTNFYAESGGQIFDQGALVKLNDEANEFLVDRVY 567
Query: 284 NK 285
N+
Sbjct: 568 NR 569
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 6/58 (10%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM------SNKQFVDSV 329
+V LRY +FV ++SG +AGI+LDK+NFYAE GGQI+D+G + +N+ VD V
Sbjct: 509 IVALRYENKFVQEITSGQKAGIVLDKTNFYAESGGQIFDQGALVKLNDEANEFLVDRV 566
>gi|326434145|gb|EGD79715.1| alanyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
Length = 955
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 84/147 (57%), Gaps = 24/147 (16%)
Query: 314 IYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSS 373
+ +EG + ++ V G++LDK+NFYAEQGGQIYD G F S
Sbjct: 510 LTEEGGLVDRVSVSEDDEELPVGVVLDKTNFYAEQGGQIYDTGR-------------FES 556
Query: 374 LVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMS 432
G+ L +F N++K+ + TL+ L+VGDKL L D RRRP MS
Sbjct: 557 TT---GAPLELDVF------NVQKRGAYCLHVATLAQGELKVGDKLTLKFDHDRRRPCMS 607
Query: 433 NHTATHILNHALRFVLGPEADQKGSLV 459
NHTATH+LN+ALR VLG EADQKGSLV
Sbjct: 608 NHTATHVLNYALRSVLG-EADQKGSLV 633
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 41/54 (75%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+ +A +GE V+ GD AWRL+DTYGFP+ LT +M EE+GL VDM+ +E AK +A
Sbjct: 395 RAVAAVGEDGVIDGDTAWRLWDTYGFPIHLTIVMAEERGLKVDMDGFEAAKARA 448
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
++P + ++ SVEFCGGTH+ + +G F I SEEA+AKG IV+ G + ++H
Sbjct: 712 ADPAASYAVDYSVEFCGGTHVKNSGDIGPFTILSEEAVAKGIRRIVAVTGQEA-LKAHRA 770
Query: 117 S 117
+
Sbjct: 771 A 771
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
Query: 239 SVSSGTE---AGILLDKSNFYAEQGGQIYDEG 267
SVS E G++LDK+NFYAEQGGQIYD G
Sbjct: 521 SVSEDDEELPVGVVLDKTNFYAEQGGQIYDTG 552
>gi|324507432|gb|ADY43152.1| Alanyl-tRNA synthetase [Ascaris suum]
Length = 693
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/153 (38%), Positives = 85/153 (55%), Gaps = 25/153 (16%)
Query: 307 YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQ 366
+A+ GQ+ + FVDS+ SG + ++LD++NFYAEQGGQIYD G + + DE
Sbjct: 504 FAKCEGQVL--ALLKEGTFVDSLYSGDKGAVILDRTNFYAEQGGQIYDTGVLTKIGDEGA 561
Query: 367 IELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTAR 426
+F +SN++ + V L+ ++ + +GD+L ID R
Sbjct: 562 ----------------------EFEVSNVQMRGGYVVLVGSVEGNISIGDRLLQAIDEER 599
Query: 427 RRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
R IM NHT TH+LN ALR VLG + +QKGSLV
Sbjct: 600 RSLIMKNHTGTHVLNFALRRVLG-DVEQKGSLV 631
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 40/47 (85%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
E+K PGD+AWRLYDTYGFPVDLTQLM EEK LSVDM+ +E ++KA
Sbjct: 403 EAKQFPGDIAWRLYDTYGFPVDLTQLMAEEKQLSVDMDAFEQCRQKA 449
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 236 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT 277
FVDS+ SG + ++LD++NFYAEQGGQIYD G + + DEG
Sbjct: 520 FVDSLYSGDKGAVILDRTNFYAEQGGQIYDTGVLTKIGDEGA 561
>gi|313221903|emb|CBY38956.1| unnamed protein product [Oikopleura dioica]
Length = 934
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 80/145 (55%), Gaps = 24/145 (16%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
NK+F S E GI+LDK+NFYAEQGGQIYD G+ ND+
Sbjct: 491 NKEFHQECES-CEVGIVLDKTNFYAEQGGQIYDLGYFSRENDDD---------------- 533
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++ N++ + V + TL L VGD++ L+IDT RR IM NHT TH+LN
Sbjct: 534 ------FEFNVKNVQVRAGYVLHVGTLVGKLSVGDEINLNIDTERRVNIMPNHTGTHVLN 587
Query: 442 HALRFVLGP-EADQKGSLVYRYHLH 465
LR VLG EADQKGSLV L
Sbjct: 588 FGLRCVLGEGEADQKGSLVAPERLR 612
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ I +L + LPGDVAW LYDTYGFP+DLT L+ EE L++ E +E+ ++KA +
Sbjct: 394 RKIKQLNLTDRLPGDVAWLLYDTYGFPLDLTTLIAEEHNLTLSCEEFEEERQKAIERSKG 453
Query: 63 QAGMETS 69
G+ T+
Sbjct: 454 ADGVATT 460
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
+ VV LR+NK+F S E GI+LDK+NFYAEQGGQIYD G+ S +
Sbjct: 482 KAKVVALRFNKEFHQECES-CEVGIVLDKTNFYAEQGGQIYDLGYFSRE 529
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 225 VKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
K + +NK+F S E GI+LDK+NFYAEQGGQIYD G+ ND+
Sbjct: 483 AKVVALRFNKEFHQECES-CEVGIVLDKTNFYAEQGGQIYDLGYFSRENDD 532
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 52/95 (54%), Gaps = 17/95 (17%)
Query: 5 IAKLGESKVLPGDVAWRLYD-TYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQ 63
++ L +SK + G A ++D TY PV + + G+ V+ E+ E+ P S
Sbjct: 647 VSPLAQSKAIQGLRA--MFDETYPDPVRVVSI-----GVPVN-ELLEN--------PTSG 690
Query: 64 AGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG 98
A +TSVEFCGGTHL H I++EEAI+KG
Sbjct: 691 AADKTSVEFCGGTHLRDISHARKLIITAEEAISKG 725
>gi|313229137|emb|CBY23722.1| unnamed protein product [Oikopleura dioica]
Length = 941
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 80/145 (55%), Gaps = 24/145 (16%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
NK+F S E GI+LDK+NFYAEQGGQIYD G+ ND+
Sbjct: 491 NKEFHQECES-CEVGIVLDKTNFYAEQGGQIYDLGYFSRENDDD---------------- 533
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++ N++ + V + TL L VGD++ L+IDT RR IM NHT TH+LN
Sbjct: 534 ------FEFNVKNVQVRAGYVLHVGTLVGKLSVGDEINLNIDTERRVNIMPNHTGTHVLN 587
Query: 442 HALRFVLGP-EADQKGSLVYRYHLH 465
LR VLG EADQKGSLV L
Sbjct: 588 FGLRCVLGEGEADQKGSLVAPERLR 612
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 44/67 (65%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ I +L + LPGDVAW LYDTYGFP+DLT L+ EE L++ E +E+ ++KA +
Sbjct: 394 RKIKQLNLTDRLPGDVAWLLYDTYGFPLDLTTLIAEEHNLTLSCEEFEEERQKAIERSKG 453
Query: 63 QAGMETS 69
G+ T+
Sbjct: 454 ADGVATT 460
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
+ VV LR+NK+F S E GI+LDK+NFYAEQGGQIYD G+ S +
Sbjct: 482 KAKVVALRFNKEFHQECES-CEVGIVLDKTNFYAEQGGQIYDLGYFSRE 529
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 225 VKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
K + +NK+F S E GI+LDK+NFYAEQGGQIYD G+ ND+
Sbjct: 483 AKVVALRFNKEFHQECES-CEVGIVLDKTNFYAEQGGQIYDLGYFSRENDD 532
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 18/107 (16%)
Query: 5 IAKLGESKVLPGDVAWRLYD-TYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQ 63
++ L +SK + G A ++D TY PV + + G+ V+ E+ E+ P S
Sbjct: 647 VSPLAQSKAIQGLRA--MFDETYPDPVRVVSI-----GVPVN-ELLEN--------PTSG 690
Query: 64 AGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
A +TSVEFCGGTHL H I++EEAI+KG +++ G++
Sbjct: 691 AADKTSVEFCGGTHLRDISHARKLIITAEEAISKGIRRVIAVTGAEA 737
>gi|308485186|ref|XP_003104792.1| CRE-AARS-2 protein [Caenorhabditis remanei]
gi|308257490|gb|EFP01443.1| CRE-AARS-2 protein [Caenorhabditis remanei]
Length = 966
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 79/136 (58%), Gaps = 23/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+FVD + +G E ILLD++NFYAEQGGQIYD G + VNDES
Sbjct: 518 KFVDELVAGEEGAILLDRTNFYAEQGGQIYDVGVLTKVNDESN----------------- 560
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+F++SN + + + L+ + ++GD + D R++ IM NHT TH+LN+A
Sbjct: 561 -----EFNVSNCQVRGGYIVLVGSSEGNFKIGDDVNQRFDEDRKQLIMKNHTGTHVLNYA 615
Query: 444 LRFVLGPEADQKGSLV 459
LR VL ++DQKGSLV
Sbjct: 616 LRKVLA-DSDQKGSLV 630
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/46 (76%), Positives = 40/46 (86%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+K PGDVAWRLYDTYGFP DLTQLM EEKGLSVD+ +E+A+KKA
Sbjct: 404 TKTFPGDVAWRLYDTYGFPADLTQLMAEEKGLSVDLTAFEEARKKA 449
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 211 TGLGDLSQTKHTPFV-KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
TG G + K P V K L + +FVD + +G E ILLD++NFYAEQGGQIYD G +
Sbjct: 493 TGEGADAVYKFEPCVGKILAIRRDGKFVDELVAGEEGAILLDRTNFYAEQGGQIYDVGVL 552
Query: 270 IGVNDE 275
VNDE
Sbjct: 553 TKVNDE 558
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 60 PESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
P++ G T+VEFCGGTHL H+G ISSEEAIAKG IV+ G +
Sbjct: 711 PDAPEGQNTTVEFCGGTHLQNVSHIGRIVISSEEAIAKGIRRIVALTGPEA 761
>gi|425868855|gb|AFY04556.1| alanyl-tRNA synthetase-like protein, partial [Megaselia scalaris]
Length = 573
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 80/144 (55%), Gaps = 23/144 (15%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
+ +FVD VS+G + G++LDK+NFYAE GGQI+D+G ++G E E + N G
Sbjct: 174 DNKFVDEVSAGQKCGLVLDKTNFYAESGGQIFDQGVLVGA--EEGNEFLVDRVYNRGG-- 229
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
Y L I + + TL+VGD+L L IDT RR M NH+ATH LN
Sbjct: 230 YILHIGV-------------------VEGTLKVGDELNLQIDTERRSLTMKNHSATHALN 270
Query: 442 HALRFVLGPEADQKGSLVYRYHLH 465
H L VLG + +QKGSLV L
Sbjct: 271 HCLLQVLGKDTEQKGSLVVPEKLR 294
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 42/54 (77%), Positives = 49/54 (90%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TI+KLG++KVLPGD+AWRLYDTYGFPVDLTQLM EEK L VDME YE AK++A
Sbjct: 54 RTISKLGDAKVLPGDIAWRLYDTYGFPVDLTQLMAEEKNLQVDMEGYEAAKQQA 107
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 37/45 (82%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
G +V +R++ +FVD VS+G + G++LDK+NFYAE GGQI+D+G +
Sbjct: 166 GKIVAIRFDNKFVDEVSAGQKCGLVLDKTNFYAESGGQIFDQGVL 210
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKK--------- 54
TI ++ +++ L ++ ++ Y L SV EVY D +
Sbjct: 304 TIEQIAKTEQLTREMVYKNMPIYAKEASLVAAKSIRGLRSVFDEVYPDPVRVLSFGVPVE 363
Query: 55 KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG 98
+ +PES G TSVEFCGGTHL + H+ DF ISSEEAIAKG
Sbjct: 364 ELTKDPESGLGENTSVEFCGGTHLQRSGHIVDFVISSEEAIAKG 407
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 44/62 (70%), Gaps = 3/62 (4%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRY 283
K + ++ +FVD VS+G + G++LDK+NFYAE GGQI+D+G ++G +EG +V Y
Sbjct: 167 KIVAIRFDNKFVDEVSAGQKCGLVLDKTNFYAESGGQIFDQGVLVGA-EEGNEFLVDRVY 225
Query: 284 NK 285
N+
Sbjct: 226 NR 227
>gi|320164762|gb|EFW41661.1| alanyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
Length = 954
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 65/161 (40%), Positives = 87/161 (54%), Gaps = 32/161 (19%)
Query: 323 KQFVDSVS----SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
K+ V +V G + GI+LDK+NFYAEQGGQI+D GF V++E+
Sbjct: 515 KELVSTVDFESLKGAKVGIVLDKTNFYAEQGGQIFDTGFATRVDNEAS------------ 562
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTAT 437
+F++ ++K V + L +L +GDKL L ID RR PIM+NHT T
Sbjct: 563 ----------EFAIESVKVYGPYVLHVGRLQGGSLSIGDKLTLSIDDIRRLPIMANHTTT 612
Query: 438 HILNHALRFVLGPEADQKGSLV----YRYHL-HENIMECEE 473
H+LN ALR VLG DQKGSLV +R+ H + EE
Sbjct: 613 HMLNFALREVLGNSVDQKGSLVRPDNFRFDFSHPKAVSTEE 653
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ + A ++ V+ G VAWRLYDTYGFP+DLT+LM E L++D ++ A+ A+
Sbjct: 396 LFERAAAASKNGVIEGLVAWRLYDTYGFPLDLTELMAAELKLTIDKPGFKIAEADAK 452
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 33/48 (68%), Gaps = 4/48 (8%)
Query: 234 KQFVDSVS----SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT 277
K+ V +V G + GI+LDK+NFYAEQGGQI+D GF V++E +
Sbjct: 515 KELVSTVDFESLKGAKVGIVLDKTNFYAEQGGQIFDTGFATRVDNEAS 562
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 26 YGFPVDLTQLMVEEKGL-SVDMEVYEDAK---------KKAQSEPESQAGMETSVEFCGG 75
Y P L L E GL +V EVY D +K ++P S + S+EFCGG
Sbjct: 672 YRVPTAL-HLAKEVAGLRAVFDEVYPDPVRVVSVGVPVEKLLADPASASWKGYSIEFCGG 730
Query: 76 THLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQSH 114
TH+ F I EE IAKG +S K +++
Sbjct: 731 THIDRTRDARRFAIFREEGIAKGIRRISGITGKEAIEAY 769
>gi|341896461|gb|EGT52396.1| hypothetical protein CAEBREN_18885 [Caenorhabditis brenneri]
Length = 966
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 80/136 (58%), Gaps = 23/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+FVD + +G E +LLD++NFYAEQGGQIYD G + VNDES
Sbjct: 518 KFVDQLVAGEEGALLLDRTNFYAEQGGQIYDVGVLTKVNDESN----------------- 560
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+F+++N + + + L+ + + VGD++ D R++ IM NHT TH+LN+A
Sbjct: 561 -----EFNVNNCQVRGGYIVLVGSAEGSFAVGDEVNQRFDEDRKQLIMKNHTGTHVLNYA 615
Query: 444 LRFVLGPEADQKGSLV 459
LR VL ++DQKGSLV
Sbjct: 616 LRKVLS-DSDQKGSLV 630
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+K PGD+AWRLYDTYGFP DLTQLM EEKGLSVD+ +++A+KKA + AG
Sbjct: 404 TKTFPGDIAWRLYDTYGFPADLTQLMAEEKGLSVDISAFDEARKKAVETSSAGAG 458
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 211 TGLGDLSQTKHTPFV-KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
TG G + K P + K L + +FVD + +G E +LLD++NFYAEQGGQIYD G +
Sbjct: 493 TGEGAEAVYKFEPCIGKILAIRRDGKFVDQLVAGEEGALLLDRTNFYAEQGGQIYDVGVL 552
Query: 270 IGVNDE 275
VNDE
Sbjct: 553 TKVNDE 558
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 60 PESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
PE++ G T+VEFCGGTHL H+G ISSEEAIAKG IV+ G +
Sbjct: 711 PEAEEGQNTTVEFCGGTHLQNVSHIGRIVISSEEAIAKGIRRIVALTGPEA 761
>gi|341876624|gb|EGT32559.1| hypothetical protein CAEBREN_22812 [Caenorhabditis brenneri]
Length = 983
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 80/136 (58%), Gaps = 23/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+FVD + +G E +LLD++NFYAEQGGQIYD G + VNDES
Sbjct: 535 KFVDQLVAGEEGALLLDRTNFYAEQGGQIYDVGVLTKVNDESN----------------- 577
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+F+++N + + + L+ + + VGD++ D R++ IM NHT TH+LN+A
Sbjct: 578 -----EFNVNNCQVRGGYIVLVGSAEGSFAVGDEVNQRFDEDRKQLIMKNHTGTHVLNYA 632
Query: 444 LRFVLGPEADQKGSLV 459
LR +L ++DQKGSLV
Sbjct: 633 LRKILS-DSDQKGSLV 647
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+K PGD+AWRLYDTYGFP DLTQLM EEKGLSVD+ +++A+KKA + AG
Sbjct: 404 TKTFPGDIAWRLYDTYGFPADLTQLMAEEKGLSVDISAFDEARKKAVETSSAGAG 458
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 35/50 (70%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
K L + +FVD + +G E +LLD++NFYAEQGGQIYD G + VNDE
Sbjct: 526 KILAIRRDGKFVDQLVAGEEGALLLDRTNFYAEQGGQIYDVGVLTKVNDE 575
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 60 PESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
PE++ G T+VEFCGGTHL H+G ISSEEAIAKG IV+ G +
Sbjct: 728 PEAEEGQNTTVEFCGGTHLQNVSHIGRIVISSEEAIAKGIRRIVALTGPEA 778
>gi|66816759|ref|XP_642382.1| alanyl-tRNA synthetase [Dictyostelium discoideum AX4]
gi|74856597|sp|Q54Y20.1|SYAC_DICDI RecName: Full=Alanine--tRNA ligase, cytoplasmic; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|60470104|gb|EAL68084.1| alanyl-tRNA synthetase [Dictyostelium discoideum AX4]
Length = 946
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 27/221 (12%)
Query: 247 GILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILL----- 301
G +D + AE+ D G+ + + + + K+ ++ G EA L
Sbjct: 415 GFPIDLTTIMAEEKNYKVDIKGYEGLCEAQSEIDRKRQKEKKVELTLGAEANAWLKNNDI 474
Query: 302 ---DKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 358
D S Y + Q + + K+FVD+ GT G++L+ SNFYAEQGGQIYD G +
Sbjct: 475 KPTDDSFKYKQHEIQSVIKAIWNGKEFVDTAPKGTLIGVVLENSNFYAEQGGQIYDIGQL 534
Query: 359 IGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKL 418
++D+ + +++ K +F + L + L +L+VGD++
Sbjct: 535 SFIDDQ-------KTAFDVKDCK----VFGGYVLH--------IGYLSYECDSLKVGDRV 575
Query: 419 KLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+L +D RR PIMSNHT+TH++N+AL+ +LG DQ+GS V
Sbjct: 576 ELTVDYTRRSPIMSNHTSTHMVNYALKNILGDGIDQRGSFV 616
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQF 287
K+FVD+ GT G++L+ SNFYAEQGGQIYD G + ++D+ T ++ K F
Sbjct: 499 KEFVDTAPKGTLIGVVLENSNFYAEQGGQIYDIGQLSFIDDQKTAFDVKDCKVF 552
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 2 LQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPE 61
+ + K + L + A+ L YGFP+DLT +M EEK VD++ YE +AQSE +
Sbjct: 390 FEKMIKKSVNNTLSAENAYFLSTCYGFPIDLTTIMAEEKNYKVDIKGYE-GLCEAQSEID 448
Query: 62 SQAGMETSVEFCGGTH 77
+ E VE G
Sbjct: 449 RKRQKEKKVELTLGAE 464
>gi|6176440|gb|AAF05592.1|AF188717_1 alanyl-tRNA synthetase [Dictyostelium discoideum]
Length = 946
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/221 (31%), Positives = 112/221 (50%), Gaps = 27/221 (12%)
Query: 247 GILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILL----- 301
G +D + AE+ D G+ + + + + K+ ++ G EA L
Sbjct: 415 GFPIDLTTIMAEEKNYKVDIKGYEGLCEAQSEIDRKRQKEKKVELTLGAEANAWLKNNDI 474
Query: 302 ---DKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 358
D S Y + Q + + K+FVD+ GT G++L+ SNFYAEQGGQIYD G +
Sbjct: 475 KPTDDSFKYKQHEIQSVIKAIWNGKEFVDTAPKGTLIGVVLENSNFYAEQGGQIYDIGQL 534
Query: 359 IGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKL 418
++D+ + +++ K +F + L + L +L+VGD++
Sbjct: 535 SFIDDQ-------KTAFDVKDCK----VFGGYVLH--------IGYLSYECDSLKVGDRV 575
Query: 419 KLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+L +D RR PIMSNHT+TH++N+AL+ +LG DQ+GS V
Sbjct: 576 ELTVDYTRRSPIMSNHTSTHMVNYALKNILGDGIDQRGSFV 616
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQF 287
K+FVD+ GT G++L+ SNFYAEQGGQIYD G + ++D+ T ++ K F
Sbjct: 499 KEFVDTAPKGTLIGVVLENSNFYAEQGGQIYDIGQLSFIDDQKTAFDVKDCKVF 552
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Query: 2 LQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPE 61
+ + K + L + A+ L YGFP+DLT +M EEK VD++ YE +AQSE +
Sbjct: 390 FEKMIKKSVNNTLSAENAYFLSTCYGFPIDLTTIMAEEKNYKVDIKGYE-GLCEAQSEID 448
Query: 62 SQAGMETSVEFCGGTH 77
+ E VE G
Sbjct: 449 RKRQKEKKVELTLGAE 464
>gi|330794423|ref|XP_003285278.1| alanyl-tRNA synthetase [Dictyostelium purpureum]
gi|325084730|gb|EGC38151.1| alanyl-tRNA synthetase [Dictyostelium purpureum]
Length = 944
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 115/230 (50%), Gaps = 39/230 (16%)
Query: 244 TEAGILLDKSNFYAEQGGQIYD-EGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLD 302
T G +D + AE+ G D +GF + + + + + K+ ++ G EA L
Sbjct: 412 TVCGFPIDLTTIMAEEKGLKVDIQGFE-KLCEAQSEIDRKRQKEKKTELTLGAEANAWLK 470
Query: 303 KSNF--------YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYD 354
+N Y ++ Q + + K+FVD+V G GI+L+ +NFY EQGGQIYD
Sbjct: 471 NNNIKITDDSFKYQQKEVQTTVKAIWNGKEFVDTVPKGQLCGIVLESTNFYPEQGGQIYD 530
Query: 355 EGFMIGVNDESQIELWFSSLVNLEGSK----YALPI-FLQFSLSNLKKKKKLVKLLHTLS 409
G + V+D+ + +++ K Y L I +L + + LK
Sbjct: 531 VGQLSFVDDQ-------KTAFDVKDCKVFGGYVLHIGYLSYECTELK------------- 570
Query: 410 HTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
VGDK++ +D RR PIMSNHT+TH++N+AL+ VLG +Q+GS V
Sbjct: 571 ----VGDKVESTVDYTRRSPIMSNHTSTHMVNYALKSVLGEGIEQRGSFV 616
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 36/54 (66%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQF 287
K+FVD+V G GI+L+ +NFY EQGGQIYD G + V+D+ T ++ K F
Sbjct: 499 KEFVDTVPKGQLCGIVLESTNFYPEQGGQIYDVGQLSFVDDQKTAFDVKDCKVF 552
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEF 72
VL A+ L GFP+DLT +M EEKGL VD++ +E +AQSE + + E E
Sbjct: 401 VLSAPNAYFLSTVCGFPIDLTTIMAEEKGLKVDIQGFEKL-CEAQSEIDRKRQKEKKTEL 459
Query: 73 CGGTH 77
G
Sbjct: 460 TLGAE 464
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 6/87 (6%)
Query: 69 SVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGSINDEMVNKYP 127
S+EFCGGTHL F I SEE + G IV+ GS+ T + +N E+ ++
Sbjct: 706 SIEFCGGTHLTNTKQAELFTIISEETLGAGVRRIVAVTGSEAT---AAHELNKELELRFN 762
Query: 128 SLYRLFRTVHKQKYVQ--DALNVSCLS 152
+L + ++ V + L SC+S
Sbjct: 763 KALKLTGSELSKEIVALLETLKSSCIS 789
>gi|425868837|gb|AFY04548.1| alanyl-tRNA synthetase-like protein, partial [Edwardsina gigantea]
Length = 359
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/138 (38%), Positives = 75/138 (54%), Gaps = 18/138 (13%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
+ +FVD+++SG GILLD++ FYAE GGQIYD+G ++ VN EL
Sbjct: 173 DNKFVDTITSGQSCGILLDRTCFYAESGGQIYDQGVLVKVNAPDDDELC----------- 221
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F + + + + + L VGD ++ +D RR+ M+NHT TH LN
Sbjct: 222 -------EFLVDRVFNRGGYIIHIGVCEGKLSVGDTVQTQLDVHRRKLTMNNHTGTHALN 274
Query: 442 HALRFVLGPEADQKGSLV 459
H L VLG + DQKGSLV
Sbjct: 275 HCLLKVLGNQTDQKGSLV 292
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 39/51 (76%), Positives = 45/51 (88%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
+TIAKLG +K++PGDVAWRLYDTYGFPVDLT LM EE+GL +DME YE AK
Sbjct: 54 RTIAKLGSAKLIPGDVAWRLYDTYGFPVDLTYLMAEERGLEIDMEAYEQAK 104
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 36/48 (75%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
K + Y+ +FVD+++SG GILLD++ FYAE GGQIYD+G ++ VN
Sbjct: 166 KIVALRYDNKFVDTITSGQSCGILLDRTCFYAESGGQIYDQGVLVKVN 213
>gi|268561116|ref|XP_002646367.1| C. briggsae CBR-ARS-2 protein [Caenorhabditis briggsae]
Length = 967
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 77/136 (56%), Gaps = 23/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+FVD + +G E +LLD++NFYAEQGGQIYD G + DES
Sbjct: 518 KFVDQLVAGEEGAVLLDRTNFYAEQGGQIYDVGVLSKSGDESN----------------- 560
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+F++SN + + + L+ + + VGD + D R++ IM NHT TH+LN+A
Sbjct: 561 -----EFNVSNCQVRGGYIVLVGSAEGSFSVGDNVNQRFDEDRKQLIMKNHTGTHVLNYA 615
Query: 444 LRFVLGPEADQKGSLV 459
LR VL ++DQKGSLV
Sbjct: 616 LRKVLA-DSDQKGSLV 630
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/55 (67%), Positives = 42/55 (76%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+K PGD+AWRLYDTYGFP DLTQLM EEKGLSVD +EDA+KKA + AG
Sbjct: 404 TKTFPGDIAWRLYDTYGFPADLTQLMAEEKGLSVDETAFEDARKKAIETSSAGAG 458
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 60 PESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
PE++AG T+VEFCGGTHL H+G ISSEEAIAKG IV+ G +
Sbjct: 711 PEAEAGQNTTVEFCGGTHLQNVSHIGRIVISSEEAIAKGIRRIVALTGPEA 761
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 35/46 (76%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
G ++ +R + +FVD + +G E +LLD++NFYAEQGGQIYD G +S
Sbjct: 508 GKILAIRRDGKFVDQLVAGEEGAVLLDRTNFYAEQGGQIYDVGVLS 553
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 211 TGLGDLSQTKHTPFV-KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
TG G + K P V K L + +FVD + +G E +LLD++NFYAEQGGQIYD G +
Sbjct: 493 TGEGSEAVYKFEPCVGKILAIRRDGKFVDQLVAGEEGAVLLDRTNFYAEQGGQIYDVGVL 552
Query: 270 IGVNDE 275
DE
Sbjct: 553 SKSGDE 558
>gi|425868857|gb|AFY04557.1| alanyl-tRNA synthetase-like protein, partial [Ceratitis capitata]
Length = 575
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 81/139 (58%), Gaps = 28/139 (20%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+FV+ + +G++AGI+LD++NFYAE GGQIYD+GF + S + + ++ N G Y
Sbjct: 176 EFVNKIEAGSKAGIILDQTNFYAESGGQIYDKGFF-AKSKSSDEKFFVETVYNRAG--YI 232
Query: 384 LPIFL---QFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
L + + +FS VGD+++L+ID RR M NH+ATH L
Sbjct: 233 LHVGVADGEFS----------------------VGDEIELNIDIERRWLTMKNHSATHAL 270
Query: 441 NHALRFVLGPEADQKGSLV 459
NH+L VLG E DQKGSLV
Sbjct: 271 NHSLLQVLGKETDQKGSLV 289
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 46/54 (85%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+T+AKLG ++PGD+AW+LYDTYGFPVDLTQLM EEK L ++ME YE+AK+ A
Sbjct: 54 RTVAKLGNQXIIPGDLAWKLYDTYGFPVDLTQLMAEEKNLQINMEEYEEAKQAA 107
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 41/53 (77%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVD 327
+ T++ LR+ +FV+ + +G++AGI+LD++NFYAE GGQIYD+GF + + D
Sbjct: 165 KATILALRFGNEFVNKIEAGSKAGIILDQTNFYAESGGQIYDKGFFAKSKSSD 217
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI--GVNDEGTVVGLRYNK 285
L + +FV+ + +G++AGI+LD++NFYAE GGQIYD+GF +DE V YN+
Sbjct: 169 LALRFGNEFVNKIEAGSKAGIILDQTNFYAESGGQIYDKGFFAKSKSSDEKFFVETVYNR 228
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+S +S AG +TSVEFCGGTHL + H+ +F I+SEEAIAKG IV+ G +
Sbjct: 367 ESNIDSDAGEKTSVEFCGGTHLQRSGHMMEFVITSEEAIAKGIRRIVALTGPEA 420
>gi|425868867|gb|AFY04561.1| alanyl-tRNA synthetase-like protein, partial [Phytomyza ilicicola]
Length = 582
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 80/137 (58%), Gaps = 17/137 (12%)
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
++FV+ + +G A ++LD++NFYAE GGQIYD+G M V L+ +K
Sbjct: 177 QEFVNKIVAGERAALVLDRTNFYAESGGQIYDQGVM----------------VKLQKNKD 220
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
A +F + + + + + + TL+VGD+L+LH+D RR M NH+ATH LNH
Sbjct: 221 ADET-CEFLVHAVYNRGGYIIHIGVVEGTLQVGDELQLHLDEERRWLTMKNHSATHALNH 279
Query: 443 ALRFVLGPEADQKGSLV 459
L VLG + +QKGSLV
Sbjct: 280 CLLRVLGKDTEQKGSLV 296
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/55 (72%), Positives = 47/55 (85%), Gaps = 1/55 (1%)
Query: 3 QTIAKLG-ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TIAKLG E KV+PGDVAWRLYDTYGFPVDLTQLM EEK L +DM YE+A++ +
Sbjct: 54 RTIAKLGGEQKVIPGDVAWRLYDTYGFPVDLTQLMAEEKQLQIDMSGYEEARQNS 108
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/40 (65%), Positives = 31/40 (77%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG 98
+PES+AG SVEFCGGTHL + H+ +F IS EEAIAKG
Sbjct: 376 KPESEAGEMASVEFCGGTHLRRSGHIMEFVISQEEAIAKG 415
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 276 GTVVGLRYNKQ-FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQ 324
+V +R Q FV+ + +G A ++LD++NFYAE GGQIYD+G M Q
Sbjct: 167 ARIVAIRNAAQEFVNKIVAGERAALVLDRTNFYAESGGQIYDQGVMVKLQ 216
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 30/37 (81%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
++FV+ + +G A ++LD++NFYAE GGQIYD+G M+
Sbjct: 177 QEFVNKIVAGERAALVLDRTNFYAESGGQIYDQGVMV 213
>gi|425869626|gb|AFY04939.1| alanyl-tRNA synthetase, partial [Haematopota pluvialis]
Length = 573
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/67 (64%), Positives = 55/67 (82%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+TIAKLG++KVLPGDVAWRLYDTYGFP+DLTQLM EEK L++DME YE AK+ + +
Sbjct: 54 RTIAKLGDAKVLPGDVAWRLYDTYGFPIDLTQLMAEEKHLAIDMEGYEKAKQNSYILSQG 113
Query: 63 QAGMETS 69
+AG + +
Sbjct: 114 KAGSKAT 120
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 36/47 (76%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
G +V LRY+ QFVD VSSG + GI+LD +NFYAE GGQIYD G M N
Sbjct: 166 GKIVALRYDNQFVDEVSSGQKCGIVLDNTNFYAESGGQIYDTGVMVN 212
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/49 (57%), Positives = 34/49 (69%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
K + Y+ QFVD VSSG + GI+LD +NFYAE GGQIYD G M+ D
Sbjct: 167 KIVALRYDNQFVDEVSSGQKCGIVLDNTNFYAESGGQIYDTGVMVNPVD 215
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 34/42 (80%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG 98
+++PES G +TSVEFCGGTHL + H+ DF ISSEEAIAKG
Sbjct: 366 ENDPESGKGEKTSVEFCGGTHLHRSGHIVDFVISSEEAIAKG 407
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 33/45 (73%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQ 366
+ QFVD VSSG + GI+LD +NFYAE GGQIYD G M+ D S+
Sbjct: 174 DNQFVDEVSSGQKCGIVLDNTNFYAESGGQIYDTGVMVNPVDASE 218
>gi|425869619|gb|AFY04936.1| alanyl-tRNA synthetase, partial [Clogmia albipunctata]
Length = 570
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/56 (73%), Positives = 50/56 (89%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+ +TI KLG++KVLPGDVAWRLYDT+GFPVDLTQ+M EEKGLS+DM YE AK++A
Sbjct: 52 LYKTITKLGDAKVLPGDVAWRLYDTFGFPVDLTQIMAEEKGLSIDMAGYEAAKEQA 107
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 74/144 (51%), Gaps = 26/144 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
QFV+ V SG AG+LLDK+ FYAE GGQI+D+G + E + ++ N G
Sbjct: 175 QFVEEVKSGESAGLLLDKTCFYAEAGGQIFDQGVFTKTGGDDG-EFFIENVQNFGGY--- 230
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHT--LSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+LHT + L+VGD++ ID RRR M+NH+ATH LN
Sbjct: 231 --------------------ILHTGKVEGVLKVGDEVHQQIDETRRRLTMNNHSATHALN 270
Query: 442 HALRFVLGPEADQKGSLVYRYHLH 465
HAL VL + QKGSLV L
Sbjct: 271 HALVRVLVMLSHQKGSLVVPEKLR 294
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
++ P AG++ SVEFCGGTHL + H+ DF ISSEEAIA+G IV+ G +
Sbjct: 366 EANPTGDAGVKNSVEFCGGTHLKRSGHIVDFVISSEEAIAEGIRRIVALTGPEA 419
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
+G +V +R QFV+ V SG AG+LLDK+ FYAE GGQI+D+G +
Sbjct: 164 DGKIVAIRVGNQFVEEVKSGESAGLLLDKTCFYAEAGGQIFDQGVFT 210
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 27/33 (81%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 267
QFV+ V SG AG+LLDK+ FYAE GGQI+D+G
Sbjct: 175 QFVEEVKSGESAGLLLDKTCFYAEAGGQIFDQG 207
>gi|402593881|gb|EJW87808.1| alanyl-tRNA synthetase [Wuchereria bancrofti]
Length = 922
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 80/142 (56%), Gaps = 24/142 (16%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
+K F+D+++SG ++LD++NFYAEQGGQI+D G + V+ S+
Sbjct: 511 ALRKDKIFLDTLNSGDFGALILDRTNFYAEQGGQIFDTGVLTEVDKGSE----------- 559
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
F +SN++ + V L+ T+ L VGD++ ID RR IM NHT T
Sbjct: 560 ------------FIVSNVQIRGGYVVLVGTVEGELSVGDRVIQAIDEDRRNLIMKNHTGT 607
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H+LN ALR V+G E +QKGSLV
Sbjct: 608 HVLNFALRKVIG-EVEQKGSLV 628
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 44/54 (81%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+ +A L +LPGDVAWRLYDTYGFP+DLTQLM EE+GL VD EV+E+ +++A
Sbjct: 394 KAVAGLQGHNILPGDVAWRLYDTYGFPLDLTQLMAEERGLVVDFEVFENCRQQA 447
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 37/47 (78%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
EG ++ LR +K F+D+++SG ++LD++NFYAEQGGQI+D G ++
Sbjct: 506 EGIILALRKDKIFLDTLNSGDFGALILDRTNFYAEQGGQIFDTGVLT 552
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 7/86 (8%)
Query: 61 ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGSIN 119
+S + T+VEFCGGTHL H+G I+ EEAIAKG I++ G + + H
Sbjct: 706 DSDLAVNTAVEFCGGTHLHNVGHIGKLVITVEEAIAKGIRRIIALTGPEASRAIHRADRL 765
Query: 120 DEMV----NKYPSLYRLFRTVHKQKY 141
++ V NK + Y + TV K ++
Sbjct: 766 EQRVEDTHNKIATDYIV--TVDKAQF 789
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 33/46 (71%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
L +K F+D+++SG ++LD++NFYAEQGGQI+D G + V+
Sbjct: 510 LALRKDKIFLDTLNSGDFGALILDRTNFYAEQGGQIFDTGVLTEVD 555
>gi|170590129|ref|XP_001899825.1| Alanyl-tRNA synthetase [Brugia malayi]
gi|158592744|gb|EDP31341.1| Alanyl-tRNA synthetase, putative [Brugia malayi]
Length = 962
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 80/142 (56%), Gaps = 24/142 (16%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
+K F+D+++SG ++LD++NFYAEQGGQI+D G + V+ S+
Sbjct: 511 ALRKDKIFLDTLNSGDFGALILDRTNFYAEQGGQIFDTGVLTEVDKGSE----------- 559
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
F +SN++ + V L+ T+ L VGDK+ ID RR IM NHT T
Sbjct: 560 ------------FIVSNVQIRGGYVVLVGTVEGQLCVGDKVIQAIDEDRRNLIMKNHTGT 607
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H+LN ALR V+G E +QKGSLV
Sbjct: 608 HVLNFALRKVIG-EVEQKGSLV 628
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 44/54 (81%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+ +A L +LPGDVAWRLYDTYGFP+DLTQLM EE+GL VD EV+E+ ++KA
Sbjct: 394 KAVAGLQGHNILPGDVAWRLYDTYGFPLDLTQLMAEERGLLVDFEVFENCRQKA 447
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 37/47 (78%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
EG ++ LR +K F+D+++SG ++LD++NFYAEQGGQI+D G ++
Sbjct: 506 EGIILALRKDKIFLDTLNSGDFGALILDRTNFYAEQGGQIFDTGVLT 552
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT 277
L +K F+D+++SG ++LD++NFYAEQGGQI+D G + V D+G+
Sbjct: 510 LALRKDKIFLDTLNSGDFGALILDRTNFYAEQGGQIFDTGVLTEV-DKGS 558
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 61 ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
+S + T+VEFCGGTHL H+G I+ EEAIAKG I++ G + H
Sbjct: 706 DSDLAVNTAVEFCGGTHLHNVGHIGKLVITVEEAIAKGIRRIIALTGPEAFRAIHRA 762
>gi|312069509|ref|XP_003137715.1| alanyl-tRNA synthetase [Loa loa]
gi|307767125|gb|EFO26359.1| alanyl-tRNA synthetase [Loa loa]
Length = 967
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 112/235 (47%), Gaps = 46/235 (19%)
Query: 247 GILLDKSNFYAEQGGQIYD-EGFMIGVNDEGTVVGLRYNKQF------VDSVSSGTEAGI 299
G LD + AE+ G + D E F + R NK V ++S GI
Sbjct: 418 GFPLDLTQLMAEERGLLIDFEAFENCRQQAAEISAARANKMRDAIDLDVSAISELKNKGI 477
Query: 300 -LLDKSNFY------AEQGGQIYD----EGFM----SNKQFVDSVSSGTEAGILLDKSNF 344
+ D S Y E +Y+ EG + +K FVD+++S I+LD++NF
Sbjct: 478 PVTDDSPKYKYYPLPPENQQTMYNFEKCEGIILALRKDKIFVDTLNSEDFGAIILDRTNF 537
Query: 345 YAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKL 404
YAEQGGQ++D G + V+ S+ F +SN++ + V L
Sbjct: 538 YAEQGGQLFDTGVLREVDKGSE-----------------------FIVSNVQIRGGYVVL 574
Query: 405 LHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+ T+ L VGDK+ ID RR IM NHT TH+LN ALR V+G E +QKGSLV
Sbjct: 575 VGTVEGELSVGDKVIQAIDEERRNLIMKNHTGTHVLNFALRKVVG-EVEQKGSLV 628
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 42/50 (84%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+L E +LPG+VAWRLYDTYGFP+DLTQLM EE+GL +D E +E+ +++A
Sbjct: 398 RLQERNILPGNVAWRLYDTYGFPLDLTQLMAEERGLLIDFEAFENCRQQA 447
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
L +K FVD+++S I+LD++NFYAEQGGQ++D G + V+
Sbjct: 510 LALRKDKIFVDTLNSEDFGAIILDRTNFYAEQGGQLFDTGVLREVD 555
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 65 GMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
+ T+VEFCGGTHL H+G I+ EEAIAKG I++ G + H
Sbjct: 714 AVNTAVEFCGGTHLHNVGHIGKLVITVEEAIAKGIRRIIALTGPEAFRAIHRA 766
>gi|396471207|ref|XP_003838816.1| similar to alanyl-tRNA synthetase [Leptosphaeria maculans JN3]
gi|312215385|emb|CBX95337.1| similar to alanyl-tRNA synthetase [Leptosphaeria maculans JN3]
Length = 968
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 62/144 (43%), Positives = 85/144 (59%), Gaps = 32/144 (22%)
Query: 322 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
NKQF+ S V G + G+LLDK+NFYAEQGGQ YD G ++ V+ E++I S+ N++
Sbjct: 514 NKQFLKSTKEVPEGEQFGVLLDKTNFYAEQGGQEYDTGRLL-VDGEAEI-----SIENVQ 567
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHT--LSH-TLRVGDKLKLHIDTARRRPIMSNHT 435
++ + +LHT L + L+VG ++ D RR PI +NHT
Sbjct: 568 -------VYAGY-------------VLHTGYLKYGELKVGSEVIAEFDELRRHPIRNNHT 607
Query: 436 ATHILNHALRFVLGPEADQKGSLV 459
TH+LN+ALR VLG E DQKGSLV
Sbjct: 608 GTHVLNYALREVLGNEVDQKGSLV 631
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 46/62 (74%), Gaps = 2/62 (3%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ--SEPESQ 63
AK S LPGD WRLYDTYGFPVDLT+LM EE+GL+++ + E A++KA+ S+ + +
Sbjct: 409 AKAKGSNDLPGDDVWRLYDTYGFPVDLTKLMAEERGLNINDKEVEKAQEKAREASKGDKK 468
Query: 64 AG 65
AG
Sbjct: 469 AG 470
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
Query: 207 IGSDTGLGDLSQTKHTPFVKRLRFS-------YNKQFVDS---VSSGTEAGILLDKSNFY 256
+G+ + D+ +T +P R + +NKQF+ S V G + G+LLDK+NFY
Sbjct: 481 LGALDAMDDVPKTDDSPKYGRENITATIKAIYHNKQFLKSTKEVPEGEQFGVLLDKTNFY 540
Query: 257 AEQGGQIYDEGFMI 270
AEQGGQ YD G ++
Sbjct: 541 AEQGGQEYDTGRLL 554
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
++P++ A + SVEFCGGTH+ + + I E IAKG IV+ G +
Sbjct: 710 ADPKNPAWGKLSVEFCGGTHVLKTGEIKELVILEESGIAKGIRRIVAVTGQEA 762
>gi|47210409|emb|CAF91677.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1194
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 60/138 (43%), Positives = 83/138 (60%), Gaps = 23/138 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAE--QGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
++V +S T + D++ F AE GGQ +DEGFM+ +D + G +
Sbjct: 592 KYVFEPASATVLALRRDRA-FCAEVTSGGQSFDEGFMVREDDST-------------GDR 637
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
++F++ N + + V + T+ TLRVGD++ LH+D ARRR IMSNHTATHILN
Sbjct: 638 ------MEFTVKNTQVRGGYVLHVGTVYGTLRVGDQVTLHVDEARRRLIMSNHTATHILN 691
Query: 442 HALRFVLGPEADQKGSLV 459
ALR VLG EADQ+GSLV
Sbjct: 692 FALRGVLG-EADQRGSLV 708
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 44/58 (75%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+ I+ LG SK +PGD AW LYDTYGFP+DLT L+ EEKGLSVD+ +E+ +K AQ P
Sbjct: 484 RKISSLGPSKTVPGDTAWLLYDTYGFPLDLTALIAEEKGLSVDLAAFEEERKAAQVGP 541
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSK 108
+P+S AG TS+EFCGGTHL + H F I SEEAIAKG IV+ G++
Sbjct: 811 DPDSTAGALTSIEFCGGTHLQNSAHAAPFIIVSEEAIAKGIRRIVAVTGAE 861
>gi|425869640|gb|AFY04946.1| alanyl-tRNA synthetase, partial [Scathophaga stercoraria]
Length = 579
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 45/51 (88%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
+TIAKLG K++PGDV WR+YDTYGFPVDLTQLM EE+GL++DME YE AK
Sbjct: 54 RTIAKLGNEKIIPGDVTWRMYDTYGFPVDLTQLMAEERGLTIDMEGYEKAK 104
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ PE++ G +TSVEFCGGTHL + H+ D ISSEEAIAKG IV+ G +
Sbjct: 372 EQNPEAETGEKTSVEFCGGTHLRRSGHIEDIVISSEEAIAKGIRRIVALTGPEA 425
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGG 312
++ +RY FV S+SSG +AG++LDK+NFYAE GG
Sbjct: 168 IIAIRYENAFVQSISSGQKAGLVLDKTNFYAESGG 202
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGG 261
K + Y FV S+SSG +AG++LDK+NFYAE GG
Sbjct: 167 KIIAIRYENAFVQSISSGQKAGLVLDKTNFYAESGG 202
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/26 (69%), Positives = 23/26 (88%)
Query: 325 FVDSVSSGTEAGILLDKSNFYAEQGG 350
FV S+SSG +AG++LDK+NFYAE GG
Sbjct: 177 FVQSISSGQKAGLVLDKTNFYAESGG 202
>gi|425869615|gb|AFY04934.1| alanyl-tRNA synthetase, partial [Bradysia tilicola]
Length = 573
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 47/52 (90%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKK 54
+TIAKLG+SK +PGDVAWRLYDTYGFPVDLT LM EEKGL++DM+ YE +K+
Sbjct: 53 RTIAKLGDSKQIPGDVAWRLYDTYGFPVDLTYLMAEEKGLTIDMDAYEKSKE 104
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 302 DKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 361
DK++ Y +G + + + +FV+ V SG GILLDK+NFYAE GGQIYD+G M V
Sbjct: 152 DKNSEYTFEGCTSVVQAIVVDNKFVNEVHSGQSCGILLDKTNFYAESGGQIYDQGVMTKV 211
Query: 362 NDES 365
+DE+
Sbjct: 212 DDEA 215
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 48/81 (59%), Gaps = 11/81 (13%)
Query: 40 KGL-SVDMEVYEDAKK---------KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCI 89
KGL SV EVY D + + +S P A + TSVEFCGGTHL + H+G+F I
Sbjct: 338 KGLRSVFDEVYPDPVRIVSFGVPVEQLESNPNDDAAVNTSVEFCGGTHLQQSGHIGEFVI 397
Query: 90 SSEEAIAKG-SNIVSYCGSKG 109
SSEEAIAKG IV+ G +
Sbjct: 398 SSEEAIAKGIRRIVALTGPEA 418
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 34/45 (75%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT 277
+ +FV+ V SG GILLDK+NFYAE GGQIYD+G M V+DE T
Sbjct: 172 DNKFVNEVHSGQSCGILLDKTNFYAESGGQIYDQGVMTKVDDEAT 216
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/44 (56%), Positives = 32/44 (72%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
V + + +FV+ V SG GILLDK+NFYAE GGQIYD+G M+
Sbjct: 166 VQAIVVDNKFVNEVHSGQSCGILLDKTNFYAESGGQIYDQGVMT 209
>gi|425869632|gb|AFY04942.1| alanyl-tRNA synthetase, partial [Cochliomyia macellaria]
Length = 479
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 47/54 (87%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TIAKLG+S ++PGDV WRLYDTYGFPVDLTQLM EEKGL +D+E YE AK+ +
Sbjct: 53 RTIAKLGDSNIIPGDVTWRLYDTYGFPVDLTQLMAEEKGLKIDIEGYEKAKQNS 106
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 38/42 (90%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDES 365
+FV+S+SSG +AG++LDK+NFYAE GGQI+D+G ++ V+DES
Sbjct: 175 KFVNSISSGQKAGLILDKTNFYAESGGQIFDQGVLVKVDDES 216
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 217 SQTKHTPFV-KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
SQ TP K + +FV+S+SSG +AG++LDK+NFYAE GGQI+D+G ++ V+DE
Sbjct: 156 SQYVFTPCTGKIVAIRCENKFVNSISSGQKAGLILDKTNFYAESGGQIFDQGVLVKVDDE 215
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 37/45 (82%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
G +V +R +FV+S+SSG +AG++LDK+NFYAE GGQI+D+G +
Sbjct: 165 GKIVAIRCENKFVNSISSGQKAGLILDKTNFYAESGGQIFDQGVL 209
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
++ P+S G ETSVEFCGGTHL + H+ + ISSEEAIAKG IV+ G +
Sbjct: 371 ENNPDSSVGEETSVEFCGGTHLQRSGHMVEIVISSEEAIAKGIRRIVALTGPEA 424
>gi|425869617|gb|AFY04935.1| alanyl-tRNA synthetase, partial [Chironomus tepperi]
Length = 392
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 48/54 (88%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TIAKL +S VLPGDVAWRLYDTYGFP+DLTQLM EE+ L++DM YE+AK+K+
Sbjct: 54 RTIAKLKDSNVLPGDVAWRLYDTYGFPIDLTQLMAEERNLTIDMVAYEEAKQKS 107
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGG 312
G ++ +R N F+D VSSG E G++LDK+NFYAE GG
Sbjct: 166 GKILAIRCNNAFIDEVSSGQECGLVLDKTNFYAESGG 202
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGG 261
K L N F+D VSSG E G++LDK+NFYAE GG
Sbjct: 167 KILAIRCNNAFIDEVSSGQECGLVLDKTNFYAESGG 202
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 23/29 (79%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGG 350
N F+D VSSG E G++LDK+NFYAE GG
Sbjct: 174 NNAFIDEVSSGQECGLVLDKTNFYAESGG 202
>gi|425869624|gb|AFY04938.1| alanyl-tRNA synthetase, partial [Sylvicola fenestralis]
Length = 560
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/54 (74%), Positives = 46/54 (85%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TI KL KVLPGDVAWRLYDTYGFP+DLTQLM EEKGL +DM YE+AKK++
Sbjct: 54 RTIGKLENIKVLPGDVAWRLYDTYGFPIDLTQLMAEEKGLEIDMPAYEEAKKQS 107
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRY 283
K + + FV V+SG + GI+LD++NFYAE GGQIYD+G ++ +NDEG +V Y
Sbjct: 166 KIVALRFENAFVQEVTSGQKCGIVLDQTNFYAESGGQIYDQGVLVKLNDEGCEFIVDRVY 225
Query: 284 NK 285
N+
Sbjct: 226 NR 227
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG 98
++ P+ AG +TSVEFCGGTHL + H+G+F ISSEEAIAKG
Sbjct: 366 EANPDGDAGEKTSVEFCGGTHLQQSGHIGNFVISSEEAIAKG 407
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 35/46 (76%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
+G +V LR+ FV V+SG + GI+LD++NFYAE GGQIYD+G +
Sbjct: 164 QGKIVALRFENAFVQEVTSGQKCGIVLDQTNFYAESGGQIYDQGVL 209
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/40 (60%), Positives = 33/40 (82%)
Query: 325 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 364
FV V+SG + GI+LD++NFYAE GGQIYD+G ++ +NDE
Sbjct: 176 FVQEVTSGQKCGIVLDQTNFYAESGGQIYDQGVLVKLNDE 215
>gi|425869636|gb|AFY04944.1| alanyl-tRNA synthetase, partial [Musca domestica]
Length = 574
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 38/51 (74%), Positives = 45/51 (88%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
+T+AKLG+ K++PGDV WRLYDTYGFPVDLTQLM EE+GL +DME YE AK
Sbjct: 54 RTVAKLGDEKIIPGDVTWRLYDTYGFPVDLTQLMAEERGLQIDMEGYESAK 104
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 36/45 (80%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
G +V +RYN +FV V SG +AGI+LDK+NFYAE GGQIYD+G +
Sbjct: 166 GKIVAIRYNNEFVQKVYSGQKAGIVLDKTNFYAESGGQIYDQGVL 210
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT--VVGLRY 283
K + YN +FV V SG +AGI+LDK+NFYAE GGQIYD+G ++ V++E +V Y
Sbjct: 167 KIVAIRYNNEFVQKVYSGQKAGIVLDKTNFYAESGGQIYDQGVLVKVDEEENEFMVDCVY 226
Query: 284 NK 285
N+
Sbjct: 227 NR 228
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ PE AG +TSVEFCGGTHL + H+ DF ISSEEAI+KG IV+ G +
Sbjct: 367 EQNPEGDAGEKTSVEFCGGTHLKRSGHIVDFVISSEEAISKGIRRIVALTGPEA 420
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/43 (60%), Positives = 35/43 (81%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 364
N +FV V SG +AGI+LDK+NFYAE GGQIYD+G ++ V++E
Sbjct: 174 NNEFVQKVYSGQKAGIVLDKTNFYAESGGQIYDQGVLVKVDEE 216
>gi|448533187|ref|XP_003870578.1| Ala1 alanyl-tRNA synthetase [Candida orthopsilosis Co 90-125]
gi|380354933|emb|CCG24449.1| Ala1 alanyl-tRNA synthetase [Candida orthopsilosis]
Length = 968
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/158 (40%), Positives = 85/158 (53%), Gaps = 37/158 (23%)
Query: 314 IYDEGFMSNKQFVDSV---SSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELW 370
IYD G +FVDS+ + G + GILLDK+ FYAEQGGQ YD G ++
Sbjct: 520 IYDGG-----KFVDSIQQDNEGKQYGILLDKTPFYAEQGGQEYDTGKLV----------- 563
Query: 371 FSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARR 427
++G +F++ N++ V LHT L L VGD++ D RR
Sbjct: 564 ------IDGK-------TEFNVENVQVYAGYV--LHTGFVLEGKLSVGDEVIAAYDELRR 608
Query: 428 RPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
PI +NHT TH+LN+ALR VLG + DQKGSLV + L
Sbjct: 609 WPIRNNHTGTHVLNYALREVLGDDVDQKGSLVAKEKLR 646
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
IA + L G WRLYDTYGFPVDLT+LM EE GL +D + +E AK++++ + A
Sbjct: 418 IASKTPEQTLSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEKGFEVAKEESREASKGGA 477
Query: 65 GMETS 69
S
Sbjct: 478 SKNAS 482
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 12/65 (18%)
Query: 266 EGFMIGVND---------EGTVVGLRYNKQFVDSV---SSGTEAGILLDKSNFYAEQGGQ 313
EG ++ ND + +V+ + +FVDS+ + G + GILLDK+ FYAEQGGQ
Sbjct: 496 EGKVVKTNDSAKYGLDNIKASVLAIYDGGKFVDSIQQDNEGKQYGILLDKTPFYAEQGGQ 555
Query: 314 IYDEG 318
YD G
Sbjct: 556 EYDTG 560
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 29/39 (74%), Gaps = 3/39 (7%)
Query: 235 QFVDSV---SSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+FVDS+ + G + GILLDK+ FYAEQGGQ YD G ++
Sbjct: 525 KFVDSIQQDNEGKQYGILLDKTPFYAEQGGQEYDTGKLV 563
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
+P ++ S+EFCGGTH+A + D I E IAKG IV+ G
Sbjct: 720 DPTNEEWRSLSIEFCGGTHVAKTSEIKDLVIIEESGIAKGIRRIVAVTG 768
>gi|408375595|ref|ZP_11173258.1| alanyl-tRNA synthetase [Alcanivorax hongdengensis A-11-3]
gi|407764559|gb|EKF73033.1| alanyl-tRNA synthetase [Alcanivorax hongdengensis A-11-3]
Length = 865
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 28/150 (18%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI-GVNDESQIELWFSSLVN 376
G + + VDS+ +G E ++L ++ FYAE GGQ+ D GF++ G N
Sbjct: 460 GLYRDGEAVDSLDAGEEGMVVLARTPFYAESGGQVGDSGFLVLGDN-------------- 505
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKL-VKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHT 435
+F++S+ KK++ V L S +L+VGDK+ ++D RRR IM NH+
Sbjct: 506 ------------RFAVSDTKKRQAAHVHLGKVESGSLKVGDKVAAYVDVERRRAIMRNHS 553
Query: 436 ATHILNHALRFVLGPEADQKGSLVYRYHLH 465
ATH+++ ALR VLG QKGSLV +L
Sbjct: 554 ATHLMHAALREVLGDHVQQKGSLVAADYLR 583
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
VLPG+V + LYDT+GFP DLT + E+ LSVDME +E A +AQ E AG
Sbjct: 377 VLPGEVLFTLYDTHGFPPDLTADVARERELSVDMEGFEKA-MEAQRERARGAG 428
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
++DE +VGL + + VDS+ +G E ++L ++ FYAE GGQ+ D GF+
Sbjct: 452 LSDEDAIVGLYRDGEAVDSLDAGEEGMVVLARTPFYAESGGQVGDSGFL 500
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ VDS+ +G E ++L ++ FYAE GGQ+ D GF++
Sbjct: 466 EAVDSLDAGEEGMVVLARTPFYAESGGQVGDSGFLV 501
>gi|115610688|ref|XP_797369.2| PREDICTED: alanine--tRNA ligase, cytoplasmic [Strongylocentrotus
purpuratus]
Length = 1041
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 76/142 (53%), Gaps = 23/142 (16%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
+ K FV+ +SG E I+LD++ FYAEQGGQ +DEG + +DE
Sbjct: 583 ALKTPKGFVECAASGEECAIILDRTTFYAEQGGQQWDEGSFVSADDEE------------ 630
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
L FS+ +++ V L T + T+ +GD + L+++ RR +M NHT T
Sbjct: 631 ----------LMFSVYDVQSYGGYVLHLGTTAETVSIGDHVTLYVNEERREKLMRNHTGT 680
Query: 438 HILNHALRFVLGPEADQKGSLV 459
HILN ALR VLG +QKGS V
Sbjct: 681 HILNFALRQVLG-HIEQKGSSV 701
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%), Gaps = 1/65 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ I +L VLPGD+AW++YD YGFP+DLT L+ +E GL VD+E +E ++ +++ E S
Sbjct: 467 KAITELSSQTVLPGDIAWKMYDAYGFPLDLTTLIADENGLGVDIEGFEKSRLESK-EITS 525
Query: 63 QAGME 67
+ G++
Sbjct: 526 RGGIK 530
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 31/48 (64%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
L K FV+ +SG E I+LD++ FYAEQGGQ +DEG + +DE
Sbjct: 582 LALKTPKGFVECAASGEECAIILDRTTFYAEQGGQQWDEGSFVSADDE 629
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
++ L+ K FV+ +SG E I+LD++ FYAEQGGQ +DEG
Sbjct: 581 ILALKTPKGFVECAASGEECAIILDRTTFYAEQGGQQWDEG 621
Score = 41.6 bits (96), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 11/67 (16%)
Query: 62 SQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQSHSGSINDE 121
++ GMETS+E CGGTH+ H+ I SE+ ++KG ++ S ND
Sbjct: 783 TKLGMETSLELCGGTHVKNTGHIRRLVIVSEKLVSKGVRRLTVVTS-----------NDV 831
Query: 122 MVNKYPS 128
M+ Y S
Sbjct: 832 MLADYTS 838
>gi|440792626|gb|ELR13835.1| alanine-tRNA ligase [Acanthamoeba castellanii str. Neff]
Length = 954
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 76/149 (51%), Gaps = 26/149 (17%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+ K+F DSV+ AG++LD++NFYAE GGQ+ D G + + +E
Sbjct: 502 RAIWTGKEFADSVTDAA-AGVVLDRTNFYAESGGQVADNGVLKTSTGQQTVE-------- 552
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+++ V + + TLRVGD ++L +D +RR + SNHT
Sbjct: 553 -----------------DVQTYGGFVVHMGAVQGTLRVGDAVRLSVDASRRHSLKSNHTT 595
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH++NHALR VLG +Q+GS+V L
Sbjct: 596 THLVNHALREVLGAHVEQRGSIVQPERLR 624
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 4/88 (4%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGM 66
K+ + G+VA+RLY TYGFP+DLT LM EEKGL VD ++ AK ++P
Sbjct: 406 KMQRGDTISGEVAFRLYGTYGFPLDLTTLMAEEKGLKVDKAGFKAAKT---AQPTGAVTA 462
Query: 67 ETSVEFCGGTHLAMAHHVGDFCISSEEA 94
GTH A+AH G + +++A
Sbjct: 463 MQKAALALGTH-AVAHLQGVPVVPTDDA 489
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Query: 265 DEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM---S 321
D I + + TV + K+F DSV+ AG++LD++NFYAE GGQ+ D G + +
Sbjct: 488 DAAKYIDSDVDATVRAIWTGKEFADSVTDAA-AGVVLDRTNFYAESGGQVADNGVLKTST 546
Query: 322 NKQFVDSVSS 331
+Q V+ V +
Sbjct: 547 GQQTVEDVQT 556
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%), Gaps = 1/45 (2%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV 278
K+F DSV+ AG++LD++NFYAE GGQ+ D G + + TV
Sbjct: 508 KEFADSVTDAA-AGVVLDRTNFYAESGGQVADNGVLKTSTGQQTV 551
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
Query: 56 AQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
A S PE + + ++E CGGTHLA F + SEEA+A+G +V++ G
Sbjct: 698 APSNPEWK---KYAIELCGGTHLARTSEAVSFAVISEEALARGIRRVVAFTG 746
>gi|425868848|gb|AFY04553.1| alanyl-tRNA synthetase-like protein, partial [Ogcodes basalis]
Length = 567
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 75/142 (52%), Gaps = 23/142 (16%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
+ N +FV+ V SG GI+L+++NFYAE GGQIYD+G I +D+S E + N
Sbjct: 169 AIIYNNEFVNDVKSGQNCGIILNETNFYAESGGQIYDQGVFIKXDDDS--EFIVKKVYNR 226
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
G Y L I + +GD+++L D RRR M+NH+ T
Sbjct: 227 GG--YILHI-------------------GVVEGCFVIGDEVELQXDEERRRLTMNNHSGT 265
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H LN +L VLG + DQKGSLV
Sbjct: 266 HALNFSLLKVLGNDTDQKGSLV 287
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/56 (62%), Positives = 47/56 (83%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+ ++I KLG +LPGD+AWRLYDTYGFPVDLT+LMVEE L++DM+ YE AK+++
Sbjct: 52 LYRSIKKLGNQNILPGDLAWRLYDTYGFPVDLTRLMVEENDLTIDMDEYEKAKQQS 107
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 61/117 (52%), Gaps = 12/117 (10%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLS-VDMEVYEDAKK-------- 54
TI ++ E + L ++ R + + L + + KGL V EVY D +
Sbjct: 303 TIKQITEIESLTRELVHRNVEIFAKEASLP-IAKKIKGLRCVFDEVYPDPVRIISFGVPV 361
Query: 55 -KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
K +S+P+S SVEFCGGTHL + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 362 EKLESDPDSGLAENASVEFCGGTHLHRSGHIVDFVISSEEAIAKGIRRIVALTGPEA 418
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT-VVGLRYN 284
K L YN +FV+ V SG GI+L+++NFYAE GGQIYD+G I +D+ +V YN
Sbjct: 166 KILAIIYNNEFVNDVKSGQNCGIILNETNFYAESGGQIYDQGVFIKXDDDSEFIVKKVYN 225
Query: 285 K 285
+
Sbjct: 226 R 226
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 34/44 (77%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+G ++ + YN +FV+ V SG GI+L+++NFYAE GGQIYD+G
Sbjct: 164 KGKILAIIYNNEFVNDVKSGQNCGIILNETNFYAESGGQIYDQG 207
>gi|425869630|gb|AFY04941.1| alanyl-tRNA synthetase, partial [Spelobia bifrons]
Length = 510
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 45/54 (83%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TIAKLG K +PGDVAWRLYDTYGFPVDLTQLM EEK + +DME YE AK+ +
Sbjct: 54 RTIAKLGNQKTIPGDVAWRLYDTYGFPVDLTQLMAEEKNMEIDMEGYEAAKQNS 107
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 39/54 (72%), Gaps = 1/54 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+++P+S AG +TSVEFCGGTHL + H+ DF SSEEAIAKG IV+ G +
Sbjct: 372 EAQPDSDAGEKTSVEFCGGTHLRRSGHIVDFVSSSEEAIAKGIRRIVALTGPEA 425
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 27/34 (79%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAE 309
G +V LRY QFV ++SG +AGILLDK+NFYAE
Sbjct: 166 GKIVALRYENQFVQQITSGQKAGILLDKTNFYAE 199
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 24/33 (72%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAE 258
K + Y QFV ++SG +AGILLDK+NFYAE
Sbjct: 167 KIVALRYENQFVQQITSGQKAGILLDKTNFYAE 199
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 21/24 (87%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAE 347
QFV ++SG +AGILLDK+NFYAE
Sbjct: 176 QFVQQITSGQKAGILLDKTNFYAE 199
>gi|425869628|gb|AFY04940.1| alanyl-tRNA synthetase, partial [Episyrphus balteatus]
Length = 580
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 47/54 (87%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TI KLG++KV+PGDVAWRLYDTYGFPVDLTQLM EEK L +DM+ YE AK+ +
Sbjct: 54 RTITKLGDAKVIPGDVAWRLYDTYGFPVDLTQLMSEEKNLQIDMDGYEAAKQNS 107
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 1/54 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
++ P+S+AG +TSVEFCGGTHL + H+ DF ISSEEAIAKG IV+ G +
Sbjct: 372 EANPDSEAGEKTSVEFCGGTHLRRSGHIVDFVISSEEAIAKGIRRIVALTGPEA 425
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 31/40 (77%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIY 315
G +V +RY QFVD V+SG + GI+LDK+NFYAE GG IY
Sbjct: 166 GKIVAIRYENQFVDEVTSGQKCGIVLDKTNFYAESGGHIY 205
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIY 264
K + Y QFVD V+SG + GI+LDK+NFYAE GG IY
Sbjct: 167 KIVAIRYENQFVDEVTSGQKCGIVLDKTNFYAESGGHIY 205
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIY 353
QFVD V+SG + GI+LDK+NFYAE GG IY
Sbjct: 176 QFVDEVTSGQKCGIVLDKTNFYAESGGHIY 205
>gi|425869634|gb|AFY04943.1| alanyl-tRNA synthetase, partial [Glossina morsitans]
Length = 580
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/54 (72%), Positives = 45/54 (83%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TI KLG KVLPGDV WRLYDTYGFPVDLTQLM EE+GL +DME Y+ AK+ +
Sbjct: 54 RTIEKLGSGKVLPGDVLWRLYDTYGFPVDLTQLMAEERGLEIDMEAYDVAKQNS 107
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 60 PESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGSI 118
P G TSVEFCGGTHL + H+ DF I SEE IAKG IV+ G++ + ++
Sbjct: 375 PNGDDGEHTSVEFCGGTHLKRSGHIVDFVIISEEGIAKGIRRIVALTGNEAVKALNRANL 434
Query: 119 NDEMVN 124
++ +N
Sbjct: 435 YEKEIN 440
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 29/37 (78%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGG 312
G ++ +RY QFV++V+SG + G++LD +NFYAE GG
Sbjct: 166 GVILAIRYENQFVETVNSGQKCGLVLDNTNFYAESGG 202
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGG 261
L Y QFV++V+SG + G++LD +NFYAE GG
Sbjct: 169 LAIRYENQFVETVNSGQKCGLVLDNTNFYAESGG 202
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 23/27 (85%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGG 350
QFV++V+SG + G++LD +NFYAE GG
Sbjct: 176 QFVETVNSGQKCGLVLDNTNFYAESGG 202
>gi|255727014|ref|XP_002548433.1| alanyl-tRNA synthetase [Candida tropicalis MYA-3404]
gi|240134357|gb|EER33912.1| alanyl-tRNA synthetase [Candida tropicalis MYA-3404]
Length = 700
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/146 (42%), Positives = 78/146 (53%), Gaps = 30/146 (20%)
Query: 318 GFMSNKQFVDSV-SSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
G +FVDS+ S + GILLDK+ FYAEQGGQ YD G ++
Sbjct: 523 GIYDGSKFVDSIEDSSVQCGILLDKTPFYAEQGGQEYDTGKIV----------------- 565
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSN 433
++G +F++SN++ V LHT L L VGD++ D RR PI +N
Sbjct: 566 IDGKS-------EFNVSNVQVYAGYV--LHTGNILEGKLSVGDEIIATYDELRRWPIRNN 616
Query: 434 HTATHILNHALRFVLGPEADQKGSLV 459
HT THILN ALR VLG DQKGSLV
Sbjct: 617 HTGTHILNFALREVLGDGVDQKGSLV 642
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
IA + L G WRLYDTYGFPVDLT+LM EE GL +D +E AK++++
Sbjct: 420 IASKTPEQTLSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEPGFERAKEESR 472
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 273 NDEGTVVGLRYNKQFVDSV-SSGTEAGILLDKSNFYAEQGGQIYDEG 318
N + TVVG+ +FVDS+ S + GILLDK+ FYAEQGGQ YD G
Sbjct: 516 NVKATVVGIYDGSKFVDSIEDSSVQCGILLDKTPFYAEQGGQEYDTG 562
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 235 QFVDSV-SSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+FVDS+ S + GILLDK+ FYAEQGGQ YD G ++
Sbjct: 529 KFVDSIEDSSVQCGILLDKTPFYAEQGGQEYDTGKIV 565
>gi|146421805|ref|XP_001486846.1| hypothetical protein PGUG_00223 [Meyerozyma guilliermondii ATCC
6260]
gi|146387967|gb|EDK36125.1| hypothetical protein PGUG_00223 [Meyerozyma guilliermondii ATCC
6260]
Length = 964
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/146 (43%), Positives = 80/146 (54%), Gaps = 30/146 (20%)
Query: 318 GFMSNKQFVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
G FVDSVS G + GILLDK++FYAEQGGQ YD+G ++
Sbjct: 519 GIYDGSSFVDSVSEVGQQVGILLDKTSFYAEQGGQEYDKGKIV----------------- 561
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLS---HTLRVGDKLKLHIDTARRRPIMSN 433
++GS +F + N++ V LHT S TL+V D++ D RR PI +N
Sbjct: 562 IDGSA-------EFEVDNVQVYGGYV--LHTGSIVYGTLKVKDEVLACYDELRRWPIRNN 612
Query: 434 HTATHILNHALRFVLGPEADQKGSLV 459
HT TH+LN ALR VLG DQKGSLV
Sbjct: 613 HTGTHVLNFALREVLGDGVDQKGSLV 638
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 32/49 (65%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
IA + L G WRLYDTYGFPVDLT+LM E GL +D E +E A+
Sbjct: 416 IASKTPEQTLSGKDVWRLYDTYGFPVDLTRLMAAEAGLKIDEEGFEKAR 464
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 2/56 (3%)
Query: 265 DEGFMIGVND-EGTVVGLRYNKQFVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEG 318
++ + G++D + VVG+ FVDSVS G + GILLDK++FYAEQGGQ YD+G
Sbjct: 503 NDSYKYGLDDVKAEVVGIYDGSSFVDSVSEVGQQVGILLDKTSFYAEQGGQEYDKG 558
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Query: 236 FVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEGFMI 270
FVDSVS G + GILLDK++FYAEQGGQ YD+G ++
Sbjct: 526 FVDSVSEVGQQVGILLDKTSFYAEQGGQEYDKGKIV 561
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P+ + SVEFCGGTH+A + D I E IAKG IV+ G++
Sbjct: 718 DPKRDEWHQVSVEFCGGTHVAKTGEIKDLVIIEESGIAKGIRRIVAVTGTEA 769
>gi|294654445|ref|XP_456501.2| DEHA2A03652p [Debaryomyces hansenii CBS767]
gi|199428887|emb|CAG84453.2| DEHA2A03652p [Debaryomyces hansenii CBS767]
Length = 1021
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/227 (34%), Positives = 110/227 (48%), Gaps = 40/227 (17%)
Query: 247 GILLDKSNFYAEQGG-QIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSN 305
G +D + AE+ G +I +EGF + NK V + A LD ++
Sbjct: 495 GFPVDLTRLMAEEAGLKIDEEGFEKAKEESREASKATNNKAGVSLIKLDVHALSELDGND 554
Query: 306 FYAEQGGQI-YD-EGFMSN-------KQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDE 355
+ YD E +N FVDS+S +G++AGILLDK+ FYAE GGQ YD
Sbjct: 555 KVPKTDDSFKYDIENIKANVVAIYNGSSFVDSISEAGSQAGILLDKTPFYAESGGQEYDT 614
Query: 356 GFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHT---LSHTL 412
G ++ ++G +FS+SN++ V LHT L +L
Sbjct: 615 GKLV-----------------IDG-------VAEFSVSNVQVYGGYV--LHTGSLLEGSL 648
Query: 413 RVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
++ D++ D RR PI +NHT TH+LN ALR VLG DQKGSLV
Sbjct: 649 KLEDEIIATYDELRRWPIRNNHTGTHVLNFALREVLGDNVDQKGSLV 695
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
IA + L G WRLYDTYGFPVDLT+LM EE GL +D E +E AK++++
Sbjct: 473 IASKTPEQTLSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEEGFEKAKEESR 525
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Query: 236 FVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
FVDS+S +G++AGILLDK+ FYAE GGQ YD G ++
Sbjct: 583 FVDSISEAGSQAGILLDKTPFYAESGGQEYDTGKLV 618
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P++ + S+E CGGTH+A + D I E IAKG IV+ G++
Sbjct: 775 DPKNSEWHKVSIELCGGTHVAKTGDIKDLVIIEESGIAKGIRRIVAVTGTEA 826
>gi|358342377|dbj|GAA28662.2| alanyl-tRNA synthetase [Clonorchis sinensis]
Length = 931
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 62/166 (37%), Positives = 90/166 (54%), Gaps = 31/166 (18%)
Query: 302 DKSNFYAE-QGGQIYDE---GFMSNKQ---FVDSVS-SGTEAGILLDKSNFYAEQGGQIY 353
+K N+ A+ QG + E +S +Q FV VS SG G +LDK+ FYAE GGQ+Y
Sbjct: 429 EKYNYQADAQGNYAFPEIEATILSIRQESMFVPDVSQSGQLCGFILDKTIFYAEAGGQLY 488
Query: 354 DEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLR 413
D GF+ ++D++ + +++++ + V + L
Sbjct: 489 DTGFITKISDDA----------------------CELCVTDVQYRGGYVLHIGRLEGHFA 526
Query: 414 VGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+GDK+++ ID RR +M NHT TH+LN ALR VLG EADQKGSLV
Sbjct: 527 IGDKVRMCIDGVRRSGLMRNHTGTHVLNFALRKVLG-EADQKGSLV 571
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 40/53 (75%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
VLPG VAWRLYDTYGFP+DLTQLM EE L +D+ YE AK+ AQ+ ++ A
Sbjct: 349 VLPGTVAWRLYDTYGFPLDLTQLMAEEHNLKLDLAGYEKAKELAQARSQTGAA 401
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 55 KAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
K ++P AG TSVEFCGGTH+ H+G I SEEAIAKG IV+ G +G
Sbjct: 647 KLVADPTGPAGNTTSVEFCGGTHVHNVKHIGSLVIVSEEAIAKGIRRIVALTGHEG 702
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 275 EGTVVGLRYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
E T++ +R FV VS SG G +LDK+ FYAE GGQ+YD GF++
Sbjct: 447 EATILSIRQESMFVPDVSQSGQLCGFILDKTIFYAEAGGQLYDTGFIT 494
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEG---TVVGLRY 283
L FV VS SG G +LDK+ FYAE GGQ+YD GF+ ++D+ V ++Y
Sbjct: 451 LSIRQESMFVPDVSQSGQLCGFILDKTIFYAEAGGQLYDTGFITKISDDACELCVTDVQY 510
Query: 284 NKQFV 288
+V
Sbjct: 511 RGGYV 515
>gi|330934785|ref|XP_003304705.1| hypothetical protein PTT_17354 [Pyrenophora teres f. teres 0-1]
gi|311318587|gb|EFQ87206.1| hypothetical protein PTT_17354 [Pyrenophora teres f. teres 0-1]
Length = 966
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/144 (41%), Positives = 84/144 (58%), Gaps = 32/144 (22%)
Query: 322 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
NK+F+ S V G + G+LLD++NFYAEQGGQ YD G ++ V+ E++I S+ N++
Sbjct: 514 NKKFLKSTKEVPEGEQFGVLLDRTNFYAEQGGQEYDTGKLL-VDGEAEI-----SIDNVQ 567
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHT--LSH-TLRVGDKLKLHIDTARRRPIMSNHT 435
++ + +LHT L + L VG ++ D RR PI +NHT
Sbjct: 568 -------VYAGY-------------VLHTGYLKYGELSVGSEVIAEFDELRRHPIRNNHT 607
Query: 436 ATHILNHALRFVLGPEADQKGSLV 459
TH+LN+ALR VLG E DQKGSLV
Sbjct: 608 GTHVLNYALREVLGNEVDQKGSLV 631
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 41/52 (78%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
AK+ S LPGD WRLYDTYGFPVDLT+LM EE+GL +D + +DA++KA+
Sbjct: 409 AKVKGSDALPGDDVWRLYDTYGFPVDLTKLMAEERGLKIDDKEVDDAQEKAR 460
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+NK+F+ S V G + G+LLD++NFYAEQGGQ YD G ++
Sbjct: 513 HNKKFLKSTKEVPEGEQFGVLLDRTNFYAEQGGQEYDTGKLL 554
>gi|354542986|emb|CCE39704.1| hypothetical protein CPAR2_601240 [Candida parapsilosis]
Length = 961
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 79/148 (53%), Gaps = 32/148 (21%)
Query: 324 QFVDSVSS---GTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+FVDS+ G + GILLDK+ FYAEQGGQ YD G ++ ++G
Sbjct: 516 KFVDSIQQNEEGQQYGILLDKTPFYAEQGGQEYDTGKLV-----------------IDGK 558
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
+F++ N++ V LHT L L VGD + D RR PI +NHT T
Sbjct: 559 -------TEFNVENVQVYAGYV--LHTGFVLEGKLSVGDDVIAAYDELRRWPIRNNHTGT 609
Query: 438 HILNHALRFVLGPEADQKGSLVYRYHLH 465
H+LN+ALR VLG + DQKGSLV + L
Sbjct: 610 HVLNYALREVLGDDVDQKGSLVAKEKLR 637
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 40/65 (61%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
IA + L G WRLYDTYGFPVDLT+LM EE GL +D + +E AK++++ + A
Sbjct: 409 IASKTPEQTLSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEKGFEVAKEESREASKGGA 468
Query: 65 GMETS 69
S
Sbjct: 469 NKNAS 473
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 235 QFVDSVSS---GTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+FVDS+ G + GILLDK+ FYAEQGGQ YD G ++
Sbjct: 516 KFVDSIQQNEEGQQYGILLDKTPFYAEQGGQEYDTGKLV 554
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 273 NDEGTVVGLRYNKQFVDSVSS---GTEAGILLDKSNFYAEQGGQIYDEG 318
N + V+ + +FVDS+ G + GILLDK+ FYAEQGGQ YD G
Sbjct: 503 NIKAKVLAIYDGSKFVDSIQQNEEGQQYGILLDKTPFYAEQGGQEYDTG 551
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + G+ VD E+ +D P ++ S+EFCGGTH+A
Sbjct: 690 ETYPDPVRVVSI-----GVPVD-ELLKD--------PTNEEWRSISIEFCGGTHVAKTSE 735
Query: 84 VGDFCISSEEAIAKG-SNIVSYCG 106
+ D I E IAKG IV+ G
Sbjct: 736 IKDLVIIEESGIAKGIRRIVAVTG 759
>gi|328874134|gb|EGG22500.1| alanyl-tRNA synthetase [Dictyostelium fasciculatum]
Length = 961
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 79/146 (54%), Gaps = 19/146 (13%)
Query: 314 IYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSS 373
IYD N + T GI+L+ +NFY EQGGQIYD G + V D++ I
Sbjct: 500 IYDGKVFVNSLESTDTTRNTVYGIVLESTNFYPEQGGQIYDIGNINSVVDQTTI------ 553
Query: 374 LVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSN 433
N+ K +F + + + + + ++VGDK++L +D RR PIMSN
Sbjct: 554 -FNVSDCK----VFGGYVVH--------IGYITADAAAIKVGDKVELTVDYTRRSPIMSN 600
Query: 434 HTATHILNHALRFVLGPEADQKGSLV 459
HT+TH++N ALR VLG +Q+GSLV
Sbjct: 601 HTSTHMINFALRNVLGDNVEQRGSLV 626
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 41/59 (69%), Gaps = 6/59 (10%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY-----EDAKK 54
M+ + + G SKV P AW LY ++GFP+DLT+LMV+EKGL +DM+ Y EDA++
Sbjct: 395 MVDKVKQQG-SKVFPASNAWYLYSSFGFPIDLTKLMVDEKGLELDMDGYQKLADEDAER 452
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 41/89 (46%), Gaps = 13/89 (14%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGT------ 110
+ P + + S+EFCGGTH+ + F I+SEEA+A G +V+ GS T
Sbjct: 705 ANPTNPEWTQYSIEFCGGTHINNSKDAEYFAITSEEALAAGIRRVVAVTGSDATVVFENN 764
Query: 111 ------FQSHSGSINDEMVNKYPSLYRLF 133
FQ + E+ + P+L L
Sbjct: 765 KKLQARFQEATKFTGKELKDAIPTLTALL 793
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 234 KQFVDSVSS-----GTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQF 287
K FV+S+ S T GI+L+ +NFY EQGGQIYD G + V D+ T+ + K F
Sbjct: 504 KVFVNSLESTDTTRNTVYGIVLESTNFYPEQGGQIYDIGNINSVVDQTTIFNVSDCKVF 562
>gi|169603389|ref|XP_001795116.1| hypothetical protein SNOG_04704 [Phaeosphaeria nodorum SN15]
gi|160706385|gb|EAT88464.2| hypothetical protein SNOG_04704 [Phaeosphaeria nodorum SN15]
Length = 960
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 84/144 (58%), Gaps = 32/144 (22%)
Query: 322 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
NK+F+ S V G + G+LLDK+NFYAEQGGQ YD G ++ ++ E++I S+ N++
Sbjct: 514 NKKFLKSTSEVPEGEQFGVLLDKTNFYAEQGGQEYDTGRLL-IDGEAEI-----SVDNVQ 567
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHT--LSH-TLRVGDKLKLHIDTARRRPIMSNHT 435
++ + +LHT L + L+VG ++ D RR PI +NHT
Sbjct: 568 -------VYAGY-------------VLHTGYLKYGELKVGSEVIAEFDELRRNPIRNNHT 607
Query: 436 ATHILNHALRFVLGPEADQKGSLV 459
TH+LN+ALR LG E DQKGSLV
Sbjct: 608 GTHVLNYALRETLGNEVDQKGSLV 631
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 40/52 (76%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
A+ S LPGD WRLYDTYGFPVDLT+LM EE GL+++ + E+A++KA+
Sbjct: 409 AQKAGSNDLPGDDVWRLYDTYGFPVDLTKLMAEENGLNINDKEVEEAQEKAR 460
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+NK+F+ S V G + G+LLDK+NFYAEQGGQ YD G ++
Sbjct: 513 HNKKFLKSTSEVPEGEQFGVLLDKTNFYAEQGGQEYDTGRLL 554
>gi|189203303|ref|XP_001937987.1| alanyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187985086|gb|EDU50574.1| alanyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 966
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 82/144 (56%), Gaps = 32/144 (22%)
Query: 322 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
NK+F+ S V G + G+LLD++NFYAEQGGQ YD G ++ V+ E+ I++ N++
Sbjct: 514 NKKFLKSTKEVPEGEQFGVLLDRTNFYAEQGGQEYDMGKLV-VDGEACIDI-----TNVQ 567
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHT 435
++ + +LHT L VG ++ D +RR PI +NHT
Sbjct: 568 -------VYAGY-------------VLHTGYLQDGELSVGSEVIAEFDESRRHPIRNNHT 607
Query: 436 ATHILNHALRFVLGPEADQKGSLV 459
TH+LN+ALR VLG E DQKGSLV
Sbjct: 608 GTHVLNYALREVLGNEVDQKGSLV 631
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 41/52 (78%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
AK+ S LPGD WRLYDTYGFPVDLT+LM EE+GL +D + E+A++KA+
Sbjct: 409 AKVKGSDALPGDDVWRLYDTYGFPVDLTKLMAEERGLKIDDKEVEEAQEKAR 460
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+NK+F+ S V G + G+LLD++NFYAEQGGQ YD G ++
Sbjct: 513 HNKKFLKSTKEVPEGEQFGVLLDRTNFYAEQGGQEYDMGKLV 554
>gi|423121786|ref|ZP_17109470.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
gi|376393399|gb|EHT06056.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5246]
Length = 875
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 81/135 (60%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD+V++G EA ++LD++ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDAVTAGQEAVVILDQTPFYAESGGQVGDKG-------------------ELKGAGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + LSH TL+VGD L+ +D ARR+ I NH+ATH+++ AL
Sbjct: 519 ----FAVSDTQKYGQAIGHIGKLSHGTLKVGDALEADVDRARRQRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNA 448
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++ + EF G HL + V I + +A+ G V + G + D
Sbjct: 449 MIRVDGASEFKGYDHLELNAKVTALFIDGKAVDAVTAGQEAVVILDQTPFYAESGGQVGD 508
Query: 121 E 121
+
Sbjct: 509 K 509
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAG 336
V L + + VD+V++G EA ++LD++ FYAE GGQ+ D+G + F +VS + G
Sbjct: 470 VTALFIDGKAVDAVTAGQEAVVILDQTPFYAESGGQVGDKGELKGAGFSFAVSDTQKYG 528
Score = 42.4 bits (98), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VD+V++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDAVTAGQEAVVILDQTPFYAESGGQVGDKGELKGA 515
>gi|255580622|ref|XP_002531134.1| alanyl-tRNA synthetase, putative [Ricinus communis]
gi|223529283|gb|EEF31254.1| alanyl-tRNA synthetase, putative [Ricinus communis]
Length = 1025
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 108/232 (46%), Gaps = 38/232 (16%)
Query: 247 GILLDKSNFYAEQGGQIYD-EGFMIGVNDEGTVVGLRYNKQF-------VDSVSSGTEAG 298
G LD + AE+ G D EGF +++ NKQ D+ S+ + G
Sbjct: 493 GFPLDLTQLMAEERGLWVDVEGFNNAMDEARERSRNAQNKQAGGDIIMDADATSALHKKG 552
Query: 299 ILL--DKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 356
+ + D F Q + + + +F+ S +S E GI+L+ ++FYAEQGGQI+D G
Sbjct: 553 VSVTDDSYKFIWFQDHESVIKAIYTGTEFLGSTTSSNEVGIVLESTSFYAEQGGQIFDTG 612
Query: 357 FMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHT---LR 413
+LEG+ F F +SN++ V + +L+ L
Sbjct: 613 -------------------SLEGT------FGSFQVSNVQIFGGFVVHIGSLTRAAPRLS 647
Query: 414 VGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
VGDK+ +D RR I NHT TH+LN ALR VLG DQKGS+V L
Sbjct: 648 VGDKVICKVDYDRRTLIAPNHTCTHMLNFALREVLGNHVDQKGSIVLPEKLR 699
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 39/51 (76%), Gaps = 4/51 (7%)
Query: 19 AWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQSEPESQAG 65
A+ L+DTYGFP+DLTQLM EE+GL VD+E + ++A++++++ QAG
Sbjct: 485 AFVLWDTYGFPLDLTQLMAEERGLWVDVEGFNNAMDEARERSRNAQNKQAG 535
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSG 294
+F+ S +S E GI+L+ ++FYAEQGGQI+D G + G V ++ FV + S
Sbjct: 580 EFLGSTTSSNEVGIVLESTSFYAEQGGQIFDTGSLEGTFGSFQVSNVQIFGGFVVHIGSL 639
Query: 295 TEAGILL 301
T A L
Sbjct: 640 TRAAPRL 646
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQS 113
++PE++ S E CGGTH++ F + SEE IAKG ++ + G F++
Sbjct: 772 ADPENKEWSSISAELCGGTHISNTKEAKAFALLSEEGIAKGVRRITAVTTDGAFKA 827
>gi|425869621|gb|AFY04937.1| alanyl-tRNA synthetase, partial [Mayetiola destructor]
Length = 580
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 47/54 (87%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+TI +LG+ KV+PGD+AWR+YDTYGFP+DLT LM EEKGL++DM YE AK+++
Sbjct: 54 RTITRLGDEKVIPGDIAWRMYDTYGFPIDLTILMAEEKGLTIDMXGYEKAKERS 107
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/43 (58%), Positives = 31/43 (72%), Gaps = 2/43 (4%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGD-FCISSEEAIAKG 98
+S P + G+ TSVEFCGGTH H+G+ F I+SEEAIAKG
Sbjct: 372 ESNPTDE-GVHTSVEFCGGTHXXXXGHLGEYFVITSEEAIAKG 413
>gi|150864558|ref|XP_001383420.2| Alanyl-tRNA synthetase, cytoplasmic (Alanine--tRNA ligase) (AlaRS)
[Scheffersomyces stipitis CBS 6054]
gi|149385814|gb|ABN65391.2| Alanyl-tRNA synthetase, cytoplasmic (Alanine--tRNA ligase) (AlaRS)
[Scheffersomyces stipitis CBS 6054]
Length = 954
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 85/162 (52%), Gaps = 30/162 (18%)
Query: 302 DKSNFYAEQGGQIYDEGFMSNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIG 360
D S Y + + + S+ FVDS+ S + G+LLDK+ FYAEQGGQIYD G ++
Sbjct: 492 DDSAKYGRENIKATIQAIYSSSGFVDSIDDSSVQYGVLLDKTPFYAEQGGQIYDTGKLV- 550
Query: 361 VNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDK 417
++G +F+++N++ V LHT + +L V D
Sbjct: 551 ----------------IDGKA-------EFNVTNVQVYGGYV--LHTGNIVEGSLNVKDD 585
Query: 418 LKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+ D RR PI +NHT TH+LN+ALR VLG DQ+GSLV
Sbjct: 586 VIATYDELRRWPIRNNHTGTHVLNYALREVLGDSVDQRGSLV 627
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
IA + L G WRLYDTYGFP DLT+LM EE GL +D +E A+ +++ E
Sbjct: 405 IASKTPEQTLSGKDVWRLYDTYGFPSDLTRLMAEEAGLKIDEPAFEKARLESK-EASKAI 463
Query: 65 GMETSVEFC 73
G + VE
Sbjct: 464 GNKDGVELV 472
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 273 NDEGTVVGLRYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEG 318
N + T+ + + FVDS+ S + G+LLDK+ FYAEQGGQIYD G
Sbjct: 501 NIKATIQAIYSSSGFVDSIDDSSVQYGVLLDKTPFYAEQGGQIYDTG 547
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Query: 236 FVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
FVDS+ S + G+LLDK+ FYAEQGGQIYD G ++
Sbjct: 515 FVDSIDDSSVQYGVLLDKTPFYAEQGGQIYDTGKLV 550
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
+EP+ + S+EFCGGTH+A + D + E IAKG IV+ G
Sbjct: 706 AEPKKADWHKVSIEFCGGTHVAKTGDIKDLVVIEESGIAKGIRRIVAVTG 755
>gi|213404528|ref|XP_002173036.1| alanyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
gi|212001083|gb|EEB06743.1| alanyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
Length = 961
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 74/137 (54%), Gaps = 29/137 (21%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
+ +G GILLD++NFYAEQGGQ YD G + ++G
Sbjct: 520 TEKFEAGENIGILLDRTNFYAEQGGQEYDTG-----------------RITIDGK----- 557
Query: 386 IFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
L+F ++N++ V LHT +L VGD++ D RRRP+M+NHT THILN
Sbjct: 558 --LEFRVTNVQVYGGYV--LHTGFCEYGSLNVGDEVICEYDELRRRPLMNNHTVTHILNF 613
Query: 443 ALRFVLGPEADQKGSLV 459
ALR VLG DQ+GSLV
Sbjct: 614 ALREVLGEGVDQRGSLV 630
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%), Gaps = 2/67 (2%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ--SEPESQ 63
A+ ESK+L G WRLY+TYGFPVDLT LM EE GL +D+E + A+ ++ S ++
Sbjct: 405 AQKTESKMLKGMDVWRLYETYGFPVDLTHLMAEEAGLKIDVEGFNAAQAHSKEISRRAAK 464
Query: 64 AGMETSV 70
AG +++
Sbjct: 465 AGGDSAT 471
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGS 117
+P+++ + S+EFCGGTHL + DF I E IAKG IV+ + +
Sbjct: 710 DPKNEQWRQYSIEFCGGTHLPKTGEIKDFVILEESGIAKGIRRIVAVTAADANQVCRIAN 769
Query: 118 INDEMVNKYPSLYRLFRTVHKQKYVQDALNVSCLSFRGVWEHGMSVGWTGV 168
D+ +++ ++ + K V +++S LS + +H M +T +
Sbjct: 770 EFDQRLDRLAAMPHGPEKEAEIKLV--TVDLSQLSVSALRKHAMKEKFTKI 818
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 288 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
+ +G GILLD++NFYAEQGGQ YD G ++
Sbjct: 520 TEKFEAGENIGILLDRTNFYAEQGGQEYDTGRIT 553
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 267
+ +G GILLD++NFYAEQGGQ YD G
Sbjct: 520 TEKFEAGENIGILLDRTNFYAEQGGQEYDTG 550
>gi|407929570|gb|EKG22385.1| Alanyl-tRNA synthetase class IIc [Macrophomina phaseolina MS6]
Length = 963
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 81/147 (55%), Gaps = 30/147 (20%)
Query: 319 FMSNKQFVDSVSS---GTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLV 375
+ K+F+ S S G + G++LDK+NFYAEQGGQ YD G ++
Sbjct: 510 YHPEKKFIKSTSEIGEGEQIGVVLDKTNFYAEQGGQEYDTGKIL---------------- 553
Query: 376 NLEGSKYALPIFLQFSLSNLKKKKKLVKLLHT--LSH-TLRVGDKLKLHIDTARRRPIMS 432
+EG+ A F + N++ V LHT LS+ L V D++ D RR PI +
Sbjct: 554 -IEGANEAA-----FDVQNVQVSNGFV--LHTGYLSYGALSVEDEVICEYDELRRNPIRN 605
Query: 433 NHTATHILNHALRFVLGPEADQKGSLV 459
NHT TH+LN+ALR VLG + +QKGSLV
Sbjct: 606 NHTGTHVLNYALREVLGGDIEQKGSLV 632
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 28/35 (80%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD 45
SK +PG WRLYDTYGFP DLT +M EE+GL++D
Sbjct: 413 SKKIPGKDVWRLYDTYGFPEDLTLIMAEERGLTID 447
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 3/40 (7%)
Query: 234 KQFVDSVSS---GTEAGILLDKSNFYAEQGGQIYDEGFMI 270
K+F+ S S G + G++LDK+NFYAEQGGQ YD G ++
Sbjct: 514 KKFIKSTSEIGEGEQIGVVLDKTNFYAEQGGQEYDTGKIL 553
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Query: 285 KQFVDSVSS---GTEAGILLDKSNFYAEQGGQIYDEG 318
K+F+ S S G + G++LDK+NFYAEQGGQ YD G
Sbjct: 514 KKFIKSTSEIGEGEQIGVVLDKTNFYAEQGGQEYDTG 550
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTF 111
+PE++A + S+EFCGGTH+A + + + E IAKG + +G +
Sbjct: 712 DPENEAWAKLSIEFCGGTHVASTGEIKELVVVEESGIAKGIRRIIAVTGQGAY 764
>gi|291228549|ref|XP_002734240.1| PREDICTED: alanyl-tRNA synthetase-like [Saccoglossus kowalevskii]
Length = 1016
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 74/136 (54%), Gaps = 20/136 (14%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
QFV+SV ++L ++ FYAEQGGQ++D+G+ + DE+Q
Sbjct: 561 QFVESVEPDQSCDVILHQTCFYAEQGGQLWDDGYFTKLGDEAQQ---------------- 604
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+ F + N++ V T TL VG++LKLHI+ RR +M NHTA HILN +
Sbjct: 605 ----IVFEVDNVQIYGGYVVHSGTTKKTLSVGEQLKLHINEERRLGLMRNHTAAHILNWS 660
Query: 444 LRFVLGPEADQKGSLV 459
LR + G +Q+GSLV
Sbjct: 661 LRHLHGDGIEQRGSLV 676
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/70 (51%), Positives = 53/70 (75%), Gaps = 1/70 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ I+KL E ++LPGD+AW++YD +GFP+DLT LM EKG+SVDME YE+ K+K + S
Sbjct: 442 KKISKLKEPRILPGDIAWKMYDGFGFPIDLTILMCNEKGVSVDMEGYEEVKEKTH-QITS 500
Query: 63 QAGMETSVEF 72
Q G++ +E+
Sbjct: 501 QGGIKNQLEY 510
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
+ LR QFV+SV ++L ++ FYAEQGGQ++D+G+ +
Sbjct: 553 ITSLRVGGQFVESVEPDQSCDVILHQTCFYAEQGGQLWDDGYFT 596
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEG 276
QFV+SV ++L ++ FYAEQGGQ++D+G+ + DE
Sbjct: 561 QFVESVEPDQSCDVILHQTCFYAEQGGQLWDDGYFTKLGDEA 602
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 29 PVDLTQLMVEE----KGL-SVDMEVYEDAKKKAQ---------SEPESQAGMETSVEFCG 74
PVD ++ ++E +GL +V EVY D + + P G + VE CG
Sbjct: 712 PVDSQEVELDEAKQIEGLRAVFGEVYPDPVQVVSVGIPVTGLLTNPFGPGGFMSPVELCG 771
Query: 75 GTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
GTH+ M H+G I E ++ G I + GS G
Sbjct: 772 GTHVHMTEHIGKLVIIDEGKVSSGVRRITAITGSDG 807
>gi|320040301|gb|EFW22234.1| alanyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
Length = 964
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 78/141 (55%), Gaps = 26/141 (18%)
Query: 322 NKQFVDSVS---SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+K+FVDS S G + GI+LDK+NFYAEQGGQ YD G +I ++ ++++++ V +
Sbjct: 515 DKEFVDSTSGIPEGDQIGIILDKTNFYAEQGGQEYDTGKII-IDGKAELDV---RNVQMY 570
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G F+++ L VGD + D RR PI +NHT TH
Sbjct: 571 GGYVFHTGFIKYG-------------------NLSVGDSVISEYDELRRWPIRNNHTGTH 611
Query: 439 ILNHALRFVLGPEADQKGSLV 459
ILN ALR VLG DQKGSLV
Sbjct: 612 ILNFALREVLGNGIDQKGSLV 632
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 41/59 (69%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
AK S L G WRLYDT+GFPVDLTQLM EE+GLS+D +E+A+ KA+ + QA
Sbjct: 411 AKDSGSNKLHGADVWRLYDTFGFPVDLTQLMAEERGLSIDNVEFEEARLKAKEASKGQA 469
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDSVS---SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
++K+FVDS S G + GI+LDK+NFYAEQGGQ YD G +I
Sbjct: 514 HDKEFVDSTSGIPEGDQIGIILDKTNFYAEQGGQEYDTGKII 555
>gi|171687707|ref|XP_001908794.1| hypothetical protein [Podospora anserina S mat+]
gi|170943815|emb|CAP69467.1| unnamed protein product [Podospora anserina S mat+]
Length = 911
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/142 (39%), Positives = 75/142 (52%), Gaps = 28/142 (19%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
F+ N + V T GI+LDK+NFYAE GGQ+ D G +I ++DE++ F L E
Sbjct: 464 FIENSK---DVPPKTPLGIILDKTNFYAESGGQVADTGRII-IDDEAE----FKVLDTQE 515
Query: 379 GSKYALPI-FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
Y + FL++ L+ GD +K D RR+PI +NHT T
Sbjct: 516 FGGYVVHSGFLEYG-------------------NLKAGDVVKCEFDELRRQPIRNNHTGT 556
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H+LNHALR VLG +Q GSLV
Sbjct: 557 HVLNHALREVLGDTVNQAGSLV 578
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 61/112 (54%), Gaps = 14/112 (12%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGM 66
K GE K+ DV WRLYDT+GFPVDLT+LM EE+GL++D E + A++KA+ S+A
Sbjct: 358 KAGEKKLSGADV-WRLYDTFGFPVDLTKLMAEERGLTIDEEEVKVAQEKARE--ASKAVK 414
Query: 67 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQSHSGSI 118
E F T HH+ + + ++ I + + Y QS G I
Sbjct: 415 EAVTTFPKLT----VHHISE--LENDRNIPRTDSEAKYSA-----QSSEGKI 455
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGS 107
+P++ + SVEFCGGTH+ + D I E IAKG IV+Y G+
Sbjct: 658 DPKNPEWRQFSVEFCGGTHVDATGLIKDLIIVEESGIAKGIRRIVAYTGA 707
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
Query: 240 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEG 276
V T GI+LDK+NFYAE GGQ+ D G +I ++DE
Sbjct: 471 VPPKTPLGIILDKTNFYAESGGQVADTGRII-IDDEA 506
>gi|10803041|gb|AAG23689.1|AF297520_1 alanyl-tRNA synthase [Haemophilus ducreyi]
Length = 783
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 26/143 (18%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
SN Q VD V SG A ++LDK+ FYAE GGQ+ D G +
Sbjct: 380 ALFSNGQAVDKVQSGESAVVVLDKTPFYAEMGGQVGDSGLIT------------------ 421
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLL-HTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
F QF++++ +K ++ + +S +L +GD + +D ARR+ I +NH+A
Sbjct: 422 -------TAFCQFAVADTQKYGQVFGHIGQVVSGSLAIGDIISAQVDIARRQAITANHSA 474
Query: 437 THILNHALRFVLGPEADQKGSLV 459
TH+L+ ALR VLG QKGSLV
Sbjct: 475 THLLHSALRQVLGEHVVQKGSLV 497
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 273 NDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
N E V+ L N Q VD V SG A ++LDK+ FYAE GGQ+ D G ++
Sbjct: 373 NAEAKVIALFSNGQAVDKVQSGESAVVVLDKTPFYAEMGGQVGDSGLITT 422
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
E++ L G+VA++LYDTYGFP+DLT + E+ + +D +E
Sbjct: 294 ENQTLSGEVAFKLYDTYGFPLDLTADVCRERDIVIDEASFE 334
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N Q VD V SG A ++LDK+ FYAE GGQ+ D G +
Sbjct: 384 NGQAVDKVQSGESAVVVLDKTPFYAEMGGQVGDSGLI 420
>gi|451853657|gb|EMD66950.1| hypothetical protein COCSADRAFT_83417 [Cochliobolus sativus ND90Pr]
Length = 966
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 82/144 (56%), Gaps = 32/144 (22%)
Query: 322 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
NK+F+ S V G + G+LLD++NFYAEQGGQ +D G ++ V+ E++I S+ N++
Sbjct: 514 NKKFLKSTAEVPKGEQFGVLLDRTNFYAEQGGQEFDTGKLL-VDGEAEI-----SIENVQ 567
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHT 435
++ + +LHT L VG ++ D RR PI +NHT
Sbjct: 568 -------VYAGY-------------VLHTGYIKYGELSVGSEVIAEFDELRRHPIRNNHT 607
Query: 436 ATHILNHALRFVLGPEADQKGSLV 459
TH+LN+ALR VLG E DQKGSLV
Sbjct: 608 GTHVLNYALREVLGNEVDQKGSLV 631
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 39/52 (75%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
AK S LPGD WRLYDTYGFPVDLT+LM EE+GL ++ E E A++KA+
Sbjct: 409 AKTKGSDELPGDDVWRLYDTYGFPVDLTKLMAEERGLKINDEEVEVAQEKAR 460
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
Query: 207 IGSDTGLGDLSQTKHTPFVKRLRFS-------YNKQFVDS---VSSGTEAGILLDKSNFY 256
+G+ + ++ +T +P R + +NK+F+ S V G + G+LLD++NFY
Sbjct: 481 LGALENMPEVPKTDDSPKYGRENITAVIKAIYHNKKFLKSTAEVPKGEQFGVLLDRTNFY 540
Query: 257 AEQGGQIYDEGFMI 270
AEQGGQ +D G ++
Sbjct: 541 AEQGGQEFDTGKLL 554
>gi|303321650|ref|XP_003070819.1| Alanyl-tRNA synthetase, cytoplasmic , putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240110516|gb|EER28674.1| Alanyl-tRNA synthetase, cytoplasmic , putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 1023
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 78/141 (55%), Gaps = 26/141 (18%)
Query: 322 NKQFVDSVS---SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+K+FVDS S G + GI+LDK+NFYAEQGGQ YD G +I ++ ++++++ V +
Sbjct: 574 DKEFVDSTSGIPEGDQIGIILDKTNFYAEQGGQEYDTGKII-IDGKAELDV---RNVQMY 629
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G F+++ L VGD + D RR PI +NHT TH
Sbjct: 630 GGYVFHTGFIKYG-------------------NLSVGDSVISEYDELRRWPIRNNHTGTH 670
Query: 439 ILNHALRFVLGPEADQKGSLV 459
ILN ALR VLG DQKGSLV
Sbjct: 671 ILNFALREVLGNGIDQKGSLV 691
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 41/59 (69%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
AK S L G WRLYDT+GFPVDLTQLM EE+GLS+D +E+A+ KA+ + QA
Sbjct: 470 AKDSGSNKLHGADVWRLYDTFGFPVDLTQLMAEERGLSIDNVEFEEARLKAKEASKGQA 528
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDSVS---SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
++K+FVDS S G + GI+LDK+NFYAEQGGQ YD G +I
Sbjct: 573 HDKEFVDSTSGIPEGDQIGIILDKTNFYAEQGGQEYDTGKII 614
>gi|452002003|gb|EMD94462.1| hypothetical protein COCHEDRAFT_1131083 [Cochliobolus
heterostrophus C5]
Length = 966
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 82/144 (56%), Gaps = 32/144 (22%)
Query: 322 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
NK+F+ S V G + G+LLD++NFYAEQGGQ +D G ++ V+ E++I S+ N++
Sbjct: 514 NKKFLKSTAEVPKGEQFGVLLDRTNFYAEQGGQEFDTGKLL-VDGEAEI-----SIENVQ 567
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHT 435
++ + +LHT L VG ++ D RR PI +NHT
Sbjct: 568 -------VYAGY-------------VLHTGYIKYGELSVGSEVIAEFDELRRHPIRNNHT 607
Query: 436 ATHILNHALRFVLGPEADQKGSLV 459
TH+LN+ALR VLG E DQKGSLV
Sbjct: 608 GTHVLNYALREVLGNEVDQKGSLV 631
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 39/52 (75%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
AK S LPGD WRLYDTYGFPVDLT+LM EE+GL ++ E E A++KA+
Sbjct: 409 AKTKGSDELPGDDVWRLYDTYGFPVDLTKLMAEERGLKINDEEVEVAQEKAR 460
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%), Gaps = 10/74 (13%)
Query: 207 IGSDTGLGDLSQTKHTPFVKRLRFS-------YNKQFVDS---VSSGTEAGILLDKSNFY 256
+G+ + ++ +T +P R + +NK+F+ S V G + G+LLD++NFY
Sbjct: 481 LGALENMPEVPKTDDSPKFGRENITAVIKAIYHNKKFLKSTAEVPKGEQFGVLLDRTNFY 540
Query: 257 AEQGGQIYDEGFMI 270
AEQGGQ +D G ++
Sbjct: 541 AEQGGQEFDTGKLL 554
>gi|33152493|ref|NP_873846.1| alanyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
gi|38372509|sp|Q7VLK0.1|SYA_HAEDU RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|33148716|gb|AAP96235.1| alanyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
Length = 874
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 75/143 (52%), Gaps = 26/143 (18%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
SN Q VD V SG A ++LDK+ FYAE GGQ+ D G +
Sbjct: 471 ALFSNGQAVDKVQSGESAVVVLDKTPFYAEMGGQVGDSGLITTA---------------- 514
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLL-HTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
F QF++++ +K ++ + +S +L +GD + +D ARR+ I +NH+A
Sbjct: 515 ---------FCQFAVADTQKYGQVFGHIGQVVSGSLAIGDIISAQVDIARRQAITANHSA 565
Query: 437 THILNHALRFVLGPEADQKGSLV 459
TH+L+ ALR VLG QKGSLV
Sbjct: 566 THLLHSALRQVLGEHVVQKGSLV 588
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%)
Query: 273 NDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
N E V+ L N Q VD V SG A ++LDK+ FYAE GGQ+ D G ++
Sbjct: 464 NAEAKVIALFSNGQAVDKVQSGESAVVVLDKTPFYAEMGGQVGDSGLIT 512
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
E++ L G+VA++LYDTYGFP+DLT + E+ + +D +E
Sbjct: 385 ENQTLSGEVAFKLYDTYGFPLDLTADVCRERDIVIDEASFE 425
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N Q VD V SG A ++LDK+ FYAE GGQ+ D G +
Sbjct: 475 NGQAVDKVQSGESAVVVLDKTPFYAEMGGQVGDSGLI 511
>gi|449283236|gb|EMC89917.1| putative alanyl-tRNA synthetase, mitochondrial, partial [Columba
livia]
Length = 909
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 22/137 (16%)
Query: 329 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFL 388
V SG G++LD++NFYAEQGGQ D+G+M+ + + +
Sbjct: 473 VGSGQRCGVILDRTNFYAEQGGQDSDQGYMMRLGQQD----------------------I 510
Query: 389 QFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVL 448
F + +++ V T TLR GD+++L +D A+R M+NHTATH+LN A+R VL
Sbjct: 511 LFPVESVQLCGGYVIHEVTAVETLRAGDQVQLFVDEAKRLACMTNHTATHLLNFAIRHVL 570
Query: 449 GPEADQKGSLVYRYHLH 465
G +Q+GS V L
Sbjct: 571 GDNTEQRGSHVTAERLR 587
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY-----EDAKKKA 56
+T+ ++ S P +VAW LY GFP+DL LM+EEKG+S+D + EDA++KA
Sbjct: 346 RTVQQMEPSTNFPAEVAWSLYANLGFPLDLIDLMLEEKGISLDSAAFNELALEDAERKA 404
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 213 LGDLSQTKHTPFVKRLRFSYNKQFVDS-VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
LG Q + +P + Y Q + V SG G++LD++NFYAEQGGQ D+G+M+
Sbjct: 445 LGQHGQYEFSPCQATILMLYRGQSLQKEVGSGQRCGVILDRTNFYAEQGGQDSDQGYMM 503
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
+ T++ L + V SG G++LD++NFYAEQGGQ D+G+M
Sbjct: 457 QATILMLYRGQSLQKEVGSGQRCGVILDRTNFYAEQGGQDSDQGYM 502
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 61 ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+S+A M+TSVE C GTHL V D I SE + KG S +++ G +
Sbjct: 661 DSEAAMQTSVELCCGTHLLQTGAVEDLTIISERQLVKGISRVIAVTGGQA 710
>gi|119195813|ref|XP_001248510.1| alanyl-tRNA synthetase, cytoplasmic [Coccidioides immitis RS]
gi|392862286|gb|EAS37081.2| alanyl-tRNA synthetase [Coccidioides immitis RS]
Length = 1023
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 78/141 (55%), Gaps = 26/141 (18%)
Query: 322 NKQFVDSVS---SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+K+FVDS S G + GI+LDK+NFYAEQGGQ YD G +I ++ ++++++ V +
Sbjct: 574 DKEFVDSTSGIPEGDQIGIILDKTNFYAEQGGQEYDTGKII-IDGKAELDV---RNVQMY 629
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G F+++ L VGD + D RR PI +NHT TH
Sbjct: 630 GGYVFHTGFIKYG-------------------DLSVGDSVISEYDELRRWPIRNNHTGTH 670
Query: 439 ILNHALRFVLGPEADQKGSLV 459
ILN ALR VLG DQKGSLV
Sbjct: 671 ILNFALREVLGNGIDQKGSLV 691
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 41/59 (69%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
AK S L G WRLYDT+GFPVDLTQLM EE+GLS+D +E+A+ KA+ + QA
Sbjct: 470 AKDSGSNKLHGADVWRLYDTFGFPVDLTQLMAEERGLSIDNVEFEEARLKAKEASKGQA 528
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/42 (59%), Positives = 32/42 (76%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDSVS---SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
++K+FVDS S G + GI+LDK+NFYAEQGGQ YD G +I
Sbjct: 573 HDKEFVDSTSGIPEGDQIGIILDKTNFYAEQGGQEYDTGKII 614
>gi|355764107|gb|EHH62253.1| hypothetical protein EGM_20519 [Macaca fascicularis]
Length = 927
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/167 (39%), Positives = 94/167 (56%), Gaps = 22/167 (13%)
Query: 298 GILLDKSNFYAEQGGQIYD-EGFMSNKQFVDSVSSGTEAG----ILLDKSNFYAEQGGQI 352
G +D + AE+ G + D +GF ++ S G AG I+LD YA + ++
Sbjct: 424 GFPVDLTGLIAEEKGLVVDMDGFEEERKLAQLKSQGKGAGGEDLIMLD---IYAIE--EL 478
Query: 353 YDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTL 412
G + V D+S ++ ++ GSK +F++ N + + V + T+ L
Sbjct: 479 RARG--LEVTDDSP---KYNYHLDFSGSK------TEFTVKNAQVRGGYVLHIGTIYGDL 527
Query: 413 RVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+VGD+++L ID RRRPIMSNHTATHILN ALR VLG EADQKGSLV
Sbjct: 528 KVGDQVRLFIDEPRRRPIMSNHTATHILNFALRSVLG-EADQKGSLV 573
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 400 RKIQSLGDSKTIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 454
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++
Sbjct: 653 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA 704
>gi|238883003|gb|EEQ46641.1| alanyl-tRNA synthetase [Candida albicans WO-1]
Length = 969
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 78/146 (53%), Gaps = 30/146 (20%)
Query: 318 GFMSNKQFVDSVSSGT-EAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
G +FVDS+ + + GILLDK+ FYAEQGGQ YD G ++
Sbjct: 522 GIYDGSKFVDSIEDPSIQYGILLDKTPFYAEQGGQEYDTGKLV----------------- 564
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSN 433
++G +F+++N++ V LHT + L VGD++ D RR PI +N
Sbjct: 565 IDGKS-------EFNVANVQVYAGYV--LHTGNIVDGKLNVGDEIIATYDELRRWPIRNN 615
Query: 434 HTATHILNHALRFVLGPEADQKGSLV 459
HT THILN ALR VLG DQKGSLV
Sbjct: 616 HTGTHILNFALREVLGDGVDQKGSLV 641
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
IA + L G WRLYDTYGFPVDLT+LM EE GL +D E +E AK++++
Sbjct: 419 IASKTPEQTLSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEEGFERAKEESR 471
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 15/84 (17%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + G+SVD ++P + E S+EFCGGTH+A
Sbjct: 700 ETYPDPVRVVSI-----GVSVD---------DLLADPTNTKWHEISIEFCGGTHVAKTGD 745
Query: 84 VGDFCISSEEAIAKG-SNIVSYCG 106
+ D I E IAKG IV+ G
Sbjct: 746 IKDLVIIEESGIAKGIRRIVAVTG 769
>gi|68475751|ref|XP_718082.1| hypothetical protein CaO19.5746 [Candida albicans SC5314]
gi|68475886|ref|XP_718016.1| hypothetical protein CaO19.13169 [Candida albicans SC5314]
gi|74586350|sp|Q5A8K2.1|SYA_CANAL RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS; Flags: Precursor
gi|46439761|gb|EAK99075.1| hypothetical protein CaO19.13169 [Candida albicans SC5314]
gi|46439836|gb|EAK99149.1| hypothetical protein CaO19.5746 [Candida albicans SC5314]
Length = 969
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/146 (40%), Positives = 78/146 (53%), Gaps = 30/146 (20%)
Query: 318 GFMSNKQFVDSVSSGT-EAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
G +FVDS+ + + GILLDK+ FYAEQGGQ YD G ++
Sbjct: 522 GIYDGSKFVDSIEDPSIQYGILLDKTPFYAEQGGQEYDTGKLV----------------- 564
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSN 433
++G +F+++N++ V LHT + L VGD++ D RR PI +N
Sbjct: 565 IDGKS-------EFNVANVQVYAGYV--LHTGNIVDGKLNVGDEIIATYDELRRWPIRNN 615
Query: 434 HTATHILNHALRFVLGPEADQKGSLV 459
HT THILN ALR VLG DQKGSLV
Sbjct: 616 HTGTHILNFALREVLGDGVDQKGSLV 641
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
IA + L G WRLYDTYGFPVDLT+LM EE GL +D E +E AK++++
Sbjct: 419 IASKTPEQTLSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEEGFERAKEESR 471
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 15/84 (17%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + G+SVD ++P + E S+EFCGGTH+A
Sbjct: 700 ETYPDPVRVVSI-----GVSVD---------DLLADPTNTKWHEISIEFCGGTHVAKTGD 745
Query: 84 VGDFCISSEEAIAKG-SNIVSYCG 106
+ D I E IAKG IV+ G
Sbjct: 746 IKDLVIIEESGIAKGIRRIVAVTG 769
>gi|45188236|ref|NP_984459.1| ADR363Cp [Ashbya gossypii ATCC 10895]
gi|44983080|gb|AAS52283.1| ADR363Cp [Ashbya gossypii ATCC 10895]
gi|374107673|gb|AEY96581.1| FADR363Cp [Ashbya gossypii FDAG1]
Length = 956
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/157 (37%), Positives = 89/157 (56%), Gaps = 29/157 (18%)
Query: 323 KQFVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
+ FV+ ++ G + GILLD++ FYAEQGGQ YD+G ++ ++D ++ ++ N++ +
Sbjct: 511 ENFVEQMTEVGKQYGILLDRTCFYAEQGGQEYDKGKLV-IDDAAEF-----NVDNVQ--Q 562
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
Y+ +F +L++ K L VGDK+ D RR PI +NHT TH+LN
Sbjct: 563 YSGYVFHTGNLADGK---------------LCVGDKIIASYDELRRYPIRNNHTGTHLLN 607
Query: 442 HALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
HALR +LG DQ+GSLV L H+ M EE
Sbjct: 608 HALRTILGDNIDQRGSLVTPEKLRFDFSHKKPMSYEE 644
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/51 (62%), Positives = 38/51 (74%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
AK SK+L G WRLYDTYGFPVDLTQLM +E GL VD E +E AK+++
Sbjct: 405 AKNSGSKILDGKQVWRLYDTYGFPVDLTQLMADEHGLKVDNEGFEQAKQES 455
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEGFMI 270
LR + FV+ ++ G + GILLD++ FYAEQGGQ YD+G ++
Sbjct: 505 LRIHDGENFVEQMTEVGKQYGILLDRTCFYAEQGGQEYDKGKLV 548
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 70/154 (45%), Gaps = 29/154 (18%)
Query: 12 KVLPGDVAWRLY-------DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
K +P DVA ++ +TY PV + + G SVD E+ E P ++
Sbjct: 665 KDIPLDVAKSIHSIRAVFGETYPDPVRVVSV-----GKSVD-EILE--------SPSNEE 710
Query: 65 GMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQSHSGSINDEMVN 124
+ S+E CGGTH++ + +F I E IAKG + + ++ + E
Sbjct: 711 WAKYSIELCGGTHVSKTGDIKEFVIIEESGIAKGIRRIVAVSASEAYEVQ--RVAREFAL 768
Query: 125 KYPSLYRLFRTVHKQKYVQ------DALNVSCLS 152
+ ++ +L ++ K+K ++ D LN+S ++
Sbjct: 769 ELDAIDKLPFSMIKEKKIREIGVRLDQLNISVIT 802
>gi|425869638|gb|AFY04945.1| alanyl-tRNA synthetase, partial [Neobellieria bullata]
Length = 522
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 36/52 (69%), Positives = 43/52 (82%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKK 54
+TI+KL V+PGDVAWRLYDTYGFP+DLTQLM EEKGL +DM YE +K+
Sbjct: 54 RTISKLENKTVIPGDVAWRLYDTYGFPIDLTQLMAEEKGLIIDMNSYEKSKQ 105
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ P S AG+ TSVEFCGGTHL + H+ DF ISSEEAI+KG IV+ G +
Sbjct: 372 EQNPNSDAGVNTSVEFCGGTHLKRSGHIIDFVISSEEAISKGIRRIVALTGPEA 425
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 32/41 (78%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYD 316
G ++ ++Y FV+S++SG +AGI+L+ +NFYAE GG IY+
Sbjct: 166 GKILAIQYENSFVESIASGQKAGIVLNATNFYAESGGHIYE 206
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYD 265
K L Y FV+S++SG +AGI+L+ +NFYAE GG IY+
Sbjct: 167 KILAIQYENSFVESIASGQKAGIVLNATNFYAESGGHIYE 206
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 26/30 (86%)
Query: 325 FVDSVSSGTEAGILLDKSNFYAEQGGQIYD 354
FV+S++SG +AGI+L+ +NFYAE GG IY+
Sbjct: 177 FVESIASGQKAGIVLNATNFYAESGGHIYE 206
>gi|407692346|ref|YP_006817135.1| alanyl-tRNA ligase [Actinobacillus suis H91-0380]
gi|407388403|gb|AFU18896.1| alanyl-tRNA ligase [Actinobacillus suis H91-0380]
Length = 874
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 80/143 (55%), Gaps = 26/143 (18%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G SN + VD++ SG A I+LD++ FYAE GGQ+ D G L++
Sbjct: 471 GLFSNGKAVDTIHSGESAVIILDQTPFYAEMGGQVGDSG-----------------LIST 513
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTA 436
E +F++S+ +K ++ + L S +L +GDK+ H++ RR+ I +NH+A
Sbjct: 514 E--------ICEFTVSDTQKYGQVFGHIGQLTSGSLAIGDKVTAHVEINRRQAITANHSA 565
Query: 437 THILNHALRFVLGPEADQKGSLV 459
TH+L+ ALR VLG QKGSLV
Sbjct: 566 THLLHSALREVLGDHVAQKGSLV 588
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
+ TVVGL N + VD++ SG A I+LD++ FYAE GGQ+ D G +S +
Sbjct: 466 QATVVGLFSNGKAVDTIHSGESAVIILDQTPFYAEMGGQVGDSGLISTE 514
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
E+ L G+VA++LYDTYGFP+DLT + E+ +++D +E A+ AQ E
Sbjct: 385 ENNTLSGEVAFKLYDTYGFPLDLTADVCRERNITIDEAGFE-AEMSAQRE 433
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N + VD++ SG A I+LD++ FYAE GGQ+ D G +
Sbjct: 475 NGKAVDTIHSGESAVIILDQTPFYAEMGGQVGDSGLI 511
>gi|329999040|ref|ZP_08303295.1| alanine--tRNA ligase [Klebsiella sp. MS 92-3]
gi|328538480|gb|EGF64595.1| alanine--tRNA ligase [Klebsiella sp. MS 92-3]
Length = 875
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDSVS+G EA ++LD++ FYAE GGQ+ D+G + GV
Sbjct: 480 VDSVSAGQEAVVILDQTPFYAESGGQVGDKGELKGVG----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLL-HTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + S TL+VGD ++ +D ARR+ I NH+ATH+++ AL
Sbjct: 517 --FSFAVSDTQKYGQAIGHIGKVASGTLKVGDAVQADVDEARRQRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNA 448
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++ + EF G HL + V I + ++++ G V + G + D
Sbjct: 449 MIRVDGASEFKGYDHLELNGKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGD 508
Query: 121 E 121
+
Sbjct: 509 K 509
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VDSVS+G EA ++LD++ FYAE GGQ+ D+G + F +VS +
Sbjct: 468 GKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGDKGELKGVGFSFAVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 29/36 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VDSVS+G EA ++LD++ FYAE GGQ+ D+G + GV
Sbjct: 480 VDSVSAGQEAVVILDQTPFYAESGGQVGDKGELKGV 515
>gi|322514279|ref|ZP_08067338.1| alanine--tRNA ligase [Actinobacillus ureae ATCC 25976]
gi|322119833|gb|EFX91853.1| alanine--tRNA ligase [Actinobacillus ureae ATCC 25976]
Length = 874
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 80/143 (55%), Gaps = 26/143 (18%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G SN + VD++ SG A I+LD++ FYAE GGQ+ D G L++
Sbjct: 471 GLFSNGKAVDTIHSGESAVIILDQTPFYAEMGGQVGDNG-----------------LIST 513
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTA 436
E +F++S+ +K ++ + L S +L +GDK+ H++ RR+ I +NH+A
Sbjct: 514 E--------ICEFTVSDTQKYGQVFGHVGQLTSGSLAIGDKVTAHVEINRRQAITANHSA 565
Query: 437 THILNHALRFVLGPEADQKGSLV 459
TH+L+ ALR VLG QKGSLV
Sbjct: 566 THLLHSALREVLGDHVAQKGSLV 588
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
+ T+VGL N + VD++ SG A I+LD++ FYAE GGQ+ D G +S +
Sbjct: 466 QATIVGLFSNGKAVDTIHSGESAVIILDQTPFYAEMGGQVGDNGLISTE 514
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
E+ L G+VA++LYDTYGFP+DLT + E+ +++D +E A+ AQ E
Sbjct: 385 ENNTLSGEVAFKLYDTYGFPLDLTADVCRERNITIDEAGFE-AEMSAQRE 433
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N + VD++ SG A I+LD++ FYAE GGQ+ D G +
Sbjct: 475 NGKAVDTIHSGESAVIILDQTPFYAEMGGQVGDNGLI 511
>gi|339254482|ref|XP_003372464.1| putative alanine--tRNA ligase [Trichinella spiralis]
gi|316967113|gb|EFV51596.1| putative alanine--tRNA ligase [Trichinella spiralis]
Length = 962
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 73/148 (49%), Gaps = 26/148 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N +FV V SG ++ DK+ FYAE GGQIYDEG M
Sbjct: 514 ALRKNGEFVSEVCSGDSCCLICDKTAFYAESGGQIYDEGSM------------------- 554
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
EG K +F + N++ + + + T+ G KL ++D RR +M NHTAT
Sbjct: 555 EGDKS------EFRVRNVQARGGYIVHFGEVMGTITRGSKLFQNVDQKRRVQVMKNHTAT 608
Query: 438 HILNHALRFVLGPEADQKGSLVYRYHLH 465
H+LN ALR VLG + +QKGSLV L
Sbjct: 609 HLLNFALREVLG-QVEQKGSLVLTDRLR 635
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+ Q I K + K++PG VAWRLY +YGFPVDLTQLM EE G V+ME YE+ +++AQ
Sbjct: 397 LRQEIEKASKDKLIPGVVAWRLYASYGFPVDLTQLMAEESGYKVNMEEYEECRQQAQMSS 456
Query: 61 ESQ 63
S+
Sbjct: 457 SSK 459
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 28/40 (70%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG 98
+P+ SVEFCGGTHL H+GDF I+SEEA+A+G
Sbjct: 709 DPDGPGAKLASVEFCGGTHLLRTGHLGDFVIASEEAVARG 748
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 28/48 (58%)
Query: 228 LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
L N +FV V SG ++ DK+ FYAE GGQIYDEG M G E
Sbjct: 513 LALRKNGEFVSEVCSGDSCCLICDKTAFYAESGGQIYDEGSMEGDKSE 560
>gi|367007058|ref|XP_003688259.1| hypothetical protein TPHA_0N00450 [Tetrapisispora phaffii CBS 4417]
gi|357526567|emb|CCE65825.1| hypothetical protein TPHA_0N00450 [Tetrapisispora phaffii CBS 4417]
Length = 957
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 101/222 (45%), Gaps = 73/222 (32%)
Query: 265 DEGFMIGVND-EGTVVGLRYNKQFVDSVSSG-TEAGILLDKSNFYAEQGGQIYDEGFMSN 322
D+ F G +D G ++ L FVD + T G++LDK+ FYAEQGGQIYD G ++
Sbjct: 492 DDSFKYGSSDISGNILRLFNGTSFVDKIEKADTVYGVILDKTCFYAEQGGQIYDTGSIT- 550
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
L +K+ + Q Q+Y+ G+++ S ++N EGS
Sbjct: 551 ---------------LDNKNTSFTVQNVQVYN-GYVL-----------HSGILN-EGS-- 580
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
L VGDK+ L + RR I +NHTATH+LN+
Sbjct: 581 -----------------------------LEVGDKVTLSYNELRRNAIKANHTATHVLNY 611
Query: 443 ALRFVLGPEADQKGSLVYRYHLH-----------ENIMECEE 473
ALR VLG E +Q+GSLV L +NIM+ EE
Sbjct: 612 ALRSVLGNEVEQRGSLVSAEKLRFDFSNRKALSLDNIMKIEE 653
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 32/48 (66%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
A+ ++L G WRLYDT+GFP+DLTQLM E L++D +E AK
Sbjct: 407 AQESSDRMLNGTDVWRLYDTFGFPLDLTQLMASELQLNIDRTGFEKAK 454
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 228 LRFSYNKQFVDSVSSG-TEAGILLDKSNFYAEQGGQIYDEG 267
LR FVD + T G++LDK+ FYAEQGGQIYD G
Sbjct: 507 LRLFNGTSFVDKIEKADTVYGVILDKTCFYAEQGGQIYDTG 547
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 66 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQSHSGSINDEMVNK 125
+ VE CGGTH++ +G ++ E +IAKG +S + + +I +
Sbjct: 714 LPNPVELCGGTHVSNTLFIGKLILTEETSIAKGIRRISAVTGEAAVTAERSAIEFRDTLE 773
Query: 126 YPSLYRLFRTVHKQKYVQDALNVSCLSFRGVWEHGMSVGW 165
Y S + F T +QK + + V+ L V +H + W
Sbjct: 774 YISKIKSF-TEKQQKLKEAGVLVNKLEIGIVSKHKLKDQW 812
>gi|406607139|emb|CCH41400.1| alanyl-tRNA synthetase [Wickerhamomyces ciferrii]
Length = 938
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/154 (40%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 314 IYDEGFMSNKQFVDSVSSGTEA-GILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFS 372
IYD K FV+ ++ T+ GI+LDK+ FYAEQGGQ YD G +I + S
Sbjct: 491 IYD-----GKDFVEEITDITKQYGIILDKTPFYAEQGGQEYDTG---------KIVIDGS 536
Query: 373 SLVNLEGSK-YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIM 431
S N+E ++ YA +F L+ L++ DK+ D RR PI
Sbjct: 537 SEFNVENTQQYAGYVFHTGRLA---------------EGQLKINDKVIAGYDELRRWPIR 581
Query: 432 SNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
+NHTATHILN ALR VLG E +QKGSLV + L
Sbjct: 582 NNHTATHILNLALREVLGDEVNQKGSLVAQEKLR 615
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 36/54 (66%), Gaps = 2/54 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
K L G WRLYDTYGFPVDLT LM EE GL +D E +E K + +S S+AG
Sbjct: 395 KTLNGKDVWRLYDTYGFPVDLTTLMAEEAGLKIDNEGFE--KARIESYEASKAG 446
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG-TFQSHS 115
++P++ S+EFCGGTH+A + DF I E IAKG I++ G++ Q +
Sbjct: 688 NDPQNPKWHGASIEFCGGTHVAKTSDIKDFVIVEESGIAKGIRRIIAVTGTEAHEVQRIA 747
Query: 116 GSINDEMVN 124
E++N
Sbjct: 748 QEFEHELIN 756
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 273 NDEGTVVGLRYNKQFVDSVSSGTEA-GILLDKSNFYAEQGGQIYDEG 318
N E ++ + K FV+ ++ T+ GI+LDK+ FYAEQGGQ YD G
Sbjct: 483 NIEAKILAIYDGKDFVEEITDITKQYGIILDKTPFYAEQGGQEYDTG 529
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Query: 234 KQFVDSVSSGTEA-GILLDKSNFYAEQGGQIYDEGFMI 270
K FV+ ++ T+ GI+LDK+ FYAEQGGQ YD G ++
Sbjct: 495 KDFVEEITDITKQYGIILDKTPFYAEQGGQEYDTGKIV 532
>gi|281208624|gb|EFA82800.1| alanyl-tRNA synthetase [Polysphondylium pallidum PN500]
Length = 958
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 112/234 (47%), Gaps = 38/234 (16%)
Query: 247 GILLDKSNFYAEQGGQIYD-EGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSN 305
G +D + AE+ G D +G+ + V ++ R K+ ++ G E +L K +
Sbjct: 421 GFPIDLTTLMAEEKGVKVDLKGYEVLV-EKFAEDSRRRQKEKKSELNLGAEPISILQKRS 479
Query: 306 F--------YAEQGGQIYDEGFMSNKQFVDSVSS---GTEAGILLDKSNFYAEQGGQIYD 354
Y ++ Q + + K+ +D +++ T G++L+ +NFY EQGGQIYD
Sbjct: 480 IQPTNDQYKYEQKEVQTVVKAIWTGKELIDQLTAEHKNTLVGVILESTNFYPEQGGQIYD 539
Query: 355 EGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH---T 411
G + V+ ++ F++S+ K V + +S
Sbjct: 540 IGNINFVDSQNT----------------------AFTVSDCKVFGGYVLHIGYISDDCDK 577
Query: 412 LRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
L VGDK++ +D RR PIMSNHT+TH++N ALR VLG DQ+GSLV L
Sbjct: 578 LAVGDKVETTVDYTRRIPIMSNHTSTHMVNFALRQVLGSTVDQRGSLVDNTRLR 631
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 2 LQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
+ I K + V+ A L ++GFP+DLT LM EEKG+ VD++ YE
Sbjct: 396 FENILKKTSNGVISASHAHYLSSSFGFPIDLTTLMAEEKGVKVDLKGYE 444
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 234 KQFVDSVSS---GTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQF 287
K+ +D +++ T G++L+ +NFY EQGGQIYD G + V+ + T + K F
Sbjct: 505 KELIDQLTAEHKNTLVGVILESTNFYPEQGGQIYDIGNINFVDSQNTAFTVSDCKVF 561
>gi|381402648|ref|ZP_09927332.1| alanyl-tRNA synthetase [Pantoea sp. Sc1]
gi|380735847|gb|EIB96910.1| alanyl-tRNA synthetase [Pantoea sp. Sc1]
Length = 875
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 75/141 (53%), Gaps = 26/141 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD VS+G +A ++LD++ FY E GGQ+ D G + G N E
Sbjct: 480 VDEVSAGQDAVVVLDETPFYGESGGQVGDTGLLKGKNAE--------------------- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
FS+ + +K + + + L+ LR+GD+L+ +D ARR I NH+ATH+L+ AL
Sbjct: 519 ----FSVQDTQKYGQAIGHVGKLTAGQLRIGDRLEAQVDAARRARIRLNHSATHLLHAAL 574
Query: 445 RFVLGPEADQKGSLVYRYHLH 465
R VLG QKGSLV +L
Sbjct: 575 RQVLGEHVGQKGSLVNDKYLR 595
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 59/130 (45%), Gaps = 13/130 (10%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G++ +RLYDT+GFP DLT + E+ L +D +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGEIVFRLYDTFGFPADLTADVCRERNLKIDEAGFEQAMEQQRQRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++ + F G L +A V ++ E + ++ G + V
Sbjct: 439 ASGFGADYSNVIRIDAASSFKGYDQLDLAATVKALYVAGEAVDEVSAGQDAVVVLDETPF 498
Query: 111 FQSHSGSIND 120
+ G + D
Sbjct: 499 YGESGGQVGD 508
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV 278
VD VS+G +A ++LD++ FY E GGQ+ D G + G N E +V
Sbjct: 480 VDEVSAGQDAVVVLDETPFYGESGGQVGDTGLLKGKNAEFSV 521
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
TV L + VD VS+G +A ++LD++ FY E GGQ+ D G + K
Sbjct: 468 ATVKALYVAGEAVDEVSAGQDAVVVLDETPFYGESGGQVGDTGLLKGK 515
>gi|356538581|ref|XP_003537781.1| PREDICTED: alanyl-tRNA synthetase-like [Glycine max]
Length = 950
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/143 (39%), Positives = 79/143 (55%), Gaps = 28/143 (19%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+FVD+V++G + G++L+ ++FYAEQGGQI+D G +LEG +A
Sbjct: 510 EFVDTVNTGDDIGVVLESTSFYAEQGGQIFDTG-------------------SLEGP-HA 549
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHT-LRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
L F + N++ V LH + T + VGDK+ +D RR I NHT TH+LN
Sbjct: 550 L-----FEVRNVQVYGGFV--LHIGNGTGVSVGDKVVCKVDYGRRALIAPNHTCTHMLNF 602
Query: 443 ALRFVLGPEADQKGSLVYRYHLH 465
ALR VLG DQKGS+V L
Sbjct: 603 ALREVLGDHVDQKGSIVLAEKLR 625
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 4/60 (6%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQSEPESQAG 65
+ +L G+ A+ L+DTYGFP+DLTQLM EEKGL VD++ + E A+++++S QAG
Sbjct: 406 QGNILSGEEAFVLWDTYGFPLDLTQLMAEEKGLVVDVKGFDSAMEAARERSRSAQTKQAG 465
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQSHSGS 117
++P+++ + S E CGGTH++ F + SEE IAKG ++ + + +
Sbjct: 698 ADPKNEKWLSISSELCGGTHISNTREAKAFALLSEEGIAKGIRRITAVTTDRAYDAM--K 755
Query: 118 INDEMVNKYPSLYRLFRTVHKQKYVQDALNVSCLSF 153
+ DE + +L T+ ++K N+ LS
Sbjct: 756 VADEFEQQVDDAAKLVGTLLEEKVSSLKSNIETLSI 791
>gi|448101964|ref|XP_004199688.1| Piso0_002228 [Millerozyma farinosa CBS 7064]
gi|359381110|emb|CCE81569.1| Piso0_002228 [Millerozyma farinosa CBS 7064]
Length = 960
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 80/139 (57%), Gaps = 30/139 (21%)
Query: 325 FVDSV-SSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
FVD++ S+ E GILLDK+ FYAEQGGQ YD G ++ ++GS
Sbjct: 522 FVDTIDSTEKEYGILLDKTAFYAEQGGQEYDTGKLV-----------------IDGS--- 561
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
+F+++N++ V LHT + +L+VG+++ + RR PI +NHT TH+L
Sbjct: 562 ----AEFNVTNVQVYGGYV--LHTGTLVEGSLKVGNEVIATYNELRRWPIRNNHTGTHVL 615
Query: 441 NHALRFVLGPEADQKGSLV 459
N ALR VLG DQKGSLV
Sbjct: 616 NFALREVLGDSVDQKGSLV 634
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 37/59 (62%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQ 63
IA + L G WRLYDTYGFPVDLT+LM EE G +D E +E A+ +++ +S
Sbjct: 413 IASKTPEQTLSGRDVWRLYDTYGFPVDLTRLMAEEAGTKIDEEGFEKARLESREASKSN 471
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Query: 236 FVDSV-SSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
FVD++ S+ E GILLDK+ FYAEQGGQ YD G ++
Sbjct: 522 FVDTIDSTEKEYGILLDKTAFYAEQGGQEYDTGKLV 557
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 265 DEGFMIGVND-EGTVVGLRYNKQFVDSV-SSGTEAGILLDKSNFYAEQGGQIYDEG 318
D+ + G+++ + +V + FVD++ S+ E GILLDK+ FYAEQGGQ YD G
Sbjct: 499 DDSYKYGLDNVKAKIVEIFDGSGFVDTIDSTEKEYGILLDKTAFYAEQGGQEYDTG 554
>gi|403215817|emb|CCK70315.1| hypothetical protein KNAG_0E00470 [Kazachstania naganishii CBS
8797]
Length = 956
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 75/136 (55%), Gaps = 24/136 (17%)
Query: 325 FVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
FVD ++ + + G++LDKS FYAEQGGQ YD G ++ ++D ++ + L N
Sbjct: 513 FVDEITETDKKYGMILDKSCFYAEQGGQEYDTGKIV-IDDVAEFNVENVQLYN------- 564
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
F +LK+ K L VGDK+ D RR PI +NHT THILN A
Sbjct: 565 ---GFVFHTGSLKEGK------------LSVGDKVIASYDELRRFPIKNNHTGTHILNFA 609
Query: 444 LRFVLGPEADQKGSLV 459
LR V+G E DQKGSLV
Sbjct: 610 LRQVIGKEVDQKGSLV 625
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 35/46 (76%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+K L G WRLYDTYGFPVDLT+LM EEKGL +D +E AK+++
Sbjct: 410 TKTLDGKQVWRLYDTYGFPVDLTELMAEEKGLKIDGPGFEKAKQES 455
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 225 VKRLRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
K L+ FVD ++ + + G++LDKS FYAEQGGQ YD G ++
Sbjct: 502 AKILKLHDGTAFVDEITETDKKYGMILDKSCFYAEQGGQEYDTGKIV 548
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
++P ++ + SVEFCGGTH+ + I E IAKG IV+ G++ F++
Sbjct: 704 ADPANEEWNKYSVEFCGGTHVVKTSDIKFLVILEENGIAKGIRRIVAVTGTEA-FEAQ-- 760
Query: 117 SINDEMVNKYPSLYRLFRTVHKQKYVQD 144
+ E ++ + ++F + K+K +++
Sbjct: 761 RVAQEFDSQLVATEKMFFSAEKEKKLKE 788
>gi|399154896|ref|ZP_10754963.1| alanyl-tRNA ligase [gamma proteobacterium SCGC AAA007-O20]
Length = 866
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + Q V+S+S G EA ++LD+S+FY E GGQ D G ++ +
Sbjct: 464 IIKDDQLVNSISEGDEAIVILDQSSFYGESGGQTGDSGLLLK-----------------K 506
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G+K+ + + + + + +LV S +L+VG K++ ID RR+ IM+NH+ATH
Sbjct: 507 GAKFEVNDTQRQASNAFEHYGRLV------SGSLKVGSKVEAKIDQQRRKNIMNNHSATH 560
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ ALR +LG + QKGSLV
Sbjct: 561 LLHEALRQILGDKVQQKGSLV 581
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+L+T + K + G++A++LYDTYGFPVDLT + E+GL+VDME +E K K Q +
Sbjct: 369 ILETAINELKGKDIDGEIAFKLYDTYGFPVDLTADVARERGLTVDMEGFE-IKMKEQKDR 427
Query: 61 ESQAG 65
+AG
Sbjct: 428 ARKAG 432
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 32/51 (62%)
Query: 273 NDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
N+ TV + + Q V+S+S G EA ++LD+S+FY E GGQ D G + K
Sbjct: 456 NNNATVSVIIKDDQLVNSISEGDEAIVILDQSSFYGESGGQTGDSGLLLKK 506
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ Q V+S+S G EA ++LD+S+FY E GGQ D G ++
Sbjct: 467 DDQLVNSISEGDEAIVILDQSSFYGESGGQTGDSGLLL 504
>gi|157148231|ref|YP_001455550.1| alanyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
gi|205830024|sp|A8ANQ1.1|SYA_CITK8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|157085436|gb|ABV15114.1| hypothetical protein CKO_04048 [Citrobacter koseri ATCC BAA-895]
Length = 875
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 80/135 (59%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++S+G EA ++LD++ FYAE GGQ+ D+G L+G+ +A
Sbjct: 480 VDAISAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFA-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + TLS +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVSDTQKYGQAIGHIGTLSTGSLKVGDAVQADVDDARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R +LG QKGSLV
Sbjct: 575 RQILGTHVAQKGSLV 589
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 70/162 (43%), Gaps = 15/162 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++ + EF G HL + V + + +AI+ G V
Sbjct: 439 ASGFGADYNAMIRVDGASEFKGYDHLELNGKVTALFVDGKAVDAISAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDEMVNKYPSLYRLFRTVHKQKYVQDALNVSCLS 152
+ G + D+ K F QKY Q ++ LS
Sbjct: 499 YAESGGQVGDKGELKGAGF--AFAVSDTQKYGQAIGHIGTLS 538
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VD++S+G EA ++LD++ FYAE GGQ+ D+G + F +VS +
Sbjct: 468 GKVTALFVDGKAVDAISAGQEAVVVLDQTPFYAESGGQVGDKGELKGAGFAFAVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VD++S+G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDAISAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|260942927|ref|XP_002615762.1| hypothetical protein CLUG_04644 [Clavispora lusitaniae ATCC 42720]
gi|238851052|gb|EEQ40516.1| hypothetical protein CLUG_04644 [Clavispora lusitaniae ATCC 42720]
Length = 964
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/140 (38%), Positives = 80/140 (57%), Gaps = 30/140 (21%)
Query: 324 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
+FVD++S +G + GI+LD++ FYAEQGGQ YD G ++ ++GS
Sbjct: 522 KFVDTISEAGQQFGIILDRTPFYAEQGGQEYDTGSLV-----------------IDGSA- 563
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHTATHI 439
+F+++N++ + LHT + TL++ D + D RR PI +NHT TH+
Sbjct: 564 ------EFAVTNVQSYGSYI--LHTGTMVEGTLKLNDNVIATYDELRRWPIRNNHTGTHV 615
Query: 440 LNHALRFVLGPEADQKGSLV 459
LN AL+ VLG DQKGSLV
Sbjct: 616 LNFALKEVLGDGIDQKGSLV 635
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 28/41 (68%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD 45
IA + L G WRLYDTYGFPVDLT+LM EE GL +D
Sbjct: 413 IASKTPEQTLSGKDVWRLYDTYGFPVDLTRLMAEEAGLKID 453
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 273 NDEGTVVGLRYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFM 320
N E +V + +FVD++S +G + GI+LD++ FYAEQGGQ YD G +
Sbjct: 509 NIESKIVAIYDGSKFVDTISEAGQQFGIILDRTPFYAEQGGQEYDTGSL 557
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Query: 235 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+FVD++S +G + GI+LD++ FYAEQGGQ YD G ++
Sbjct: 522 KFVDTISEAGQQFGIILDRTPFYAEQGGQEYDTGSLV 558
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
+P +Q + S+EFCGGTH+A + DF I E IAKG IV+ G
Sbjct: 715 DPTNQDWTKLSIEFCGGTHVAKTGDIKDFVIIEESGIAKGIRRIVAVTG 763
>gi|367004358|ref|XP_003686912.1| hypothetical protein TPHA_0H02750 [Tetrapisispora phaffii CBS 4417]
gi|357525214|emb|CCE64478.1| hypothetical protein TPHA_0H02750 [Tetrapisispora phaffii CBS 4417]
Length = 956
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/139 (41%), Positives = 76/139 (54%), Gaps = 30/139 (21%)
Query: 325 FVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
FVDS+S +G + G++LDK++FYAEQGGQ YD G +I ++ E++
Sbjct: 513 FVDSISEAGKKYGVILDKTSFYAEQGGQEYDTGKII-IDGEAE----------------- 554
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
F + N++ V HT + TL GDK D RR PI +NHT THIL
Sbjct: 555 ------FQVDNVQLYNGYV--FHTGTLIEGTLNKGDKTISSHDEERRLPIKNNHTGTHIL 606
Query: 441 NHALRFVLGPEADQKGSLV 459
N ALR LG + DQKGSLV
Sbjct: 607 NLALRQTLGNDVDQKGSLV 625
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 39/51 (76%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
A ++K+L G WRL+DTYGFPVDLT+LM EE+GL +D E +E AK+++
Sbjct: 405 AAKSQTKILDGLQVWRLFDTYGFPVDLTELMAEEQGLKIDEEGFEKAKQES 455
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 30/36 (83%), Gaps = 1/36 (2%)
Query: 236 FVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
FVDS+S +G + G++LDK++FYAEQGGQ YD G +I
Sbjct: 513 FVDSISEAGKKYGVILDKTSFYAEQGGQEYDTGKII 548
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 54/112 (48%), Gaps = 3/112 (2%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
++P ++ + SVEFCGGTH+ + F I E IAKG IV+ G++
Sbjct: 704 ADPTNEEWNKYSVEFCGGTHVPKTGDIKFFVILEESGIAKGIRRIVAVSGAEAFEVQRIA 763
Query: 117 SINDEMVNKYPSLYRLFRTVHKQKYVQDALNVSCLSFRGVWEHGMSVGWTGV 168
+ DE +NK L F ++K + + ++ LS + ++ + +T +
Sbjct: 764 NEFDEELNKTEQL--PFSQAKEKKLKELGVQLNQLSISVIRKNELKEKFTKI 813
>gi|156839933|ref|XP_001643652.1| hypothetical protein Kpol_1040p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156114272|gb|EDO15794.1| hypothetical protein Kpol_1040p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 956
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 76/141 (53%), Gaps = 30/141 (21%)
Query: 323 KQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
+QFVD ++ G + GI+LD + FYAEQGGQ YD G +I ++D
Sbjct: 511 EQFVDEITEPGKKYGIILDNTCFYAEQGGQEYDTGKII-IDD------------------ 551
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+F++ N++ V HT + L VGDK+ D RR PI +NHT TH
Sbjct: 552 -----VAEFNVENVQLYNGYV--FHTGSLVEGKLSVGDKIIAAYDELRRHPIKNNHTGTH 604
Query: 439 ILNHALRFVLGPEADQKGSLV 459
ILN+AL+ LG + DQKGSLV
Sbjct: 605 ILNYALKETLGNDVDQKGSLV 625
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETS 69
ESK L G WRLYDTYGFPVDLT+LM EE+GL +D +E AK+++ E + G + +
Sbjct: 409 ESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQESY-EASKRGGKKDN 467
Query: 70 VEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSY 104
+ + +V + +EE IAK + Y
Sbjct: 468 SDL-------LKLNVHELSQLNEEKIAKSDDSSKY 495
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
Query: 273 NDEGTVVGLRYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVS 330
N +GT++ L +QFVD ++ G + GI+LD + FYAEQGGQ YD G K +D V+
Sbjct: 499 NVDGTILKLYDGEQFVDEITEPGKKYGIILDNTCFYAEQGGQEYDTG----KIIIDDVA 553
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
L+ +QFVD ++ G + GI+LD + FYAEQGGQ YD G +I
Sbjct: 505 LKLYDGEQFVDEITEPGKKYGIILDNTCFYAEQGGQEYDTGKII 548
>gi|360043626|emb|CCD81172.1| putative alanyl-tRNA synthetase [Schistosoma mansoni]
Length = 980
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 78/137 (56%), Gaps = 24/137 (17%)
Query: 324 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
+FV+SV S GI+L+K+ FYAE GGQ+YD GF+ + DE
Sbjct: 518 KFVESVDLSSQMCGIILNKTIFYAESGGQLYDHGFITSLTDE------------------ 559
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+FS+S+++ + + + L L VG+++ L +DT RR +M NHT TH+LN
Sbjct: 560 ----VTEFSVSDVQCRGGYILHIGNLHGKLIVGNRVLLSLDTVRRTALMRNHTGTHVLNF 615
Query: 443 ALRFVLGPEADQKGSLV 459
ALR ++ E++QKGSLV
Sbjct: 616 ALRELVD-ESEQKGSLV 631
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQ 63
L G+VAW LY+TYGFP+DLTQ++ EE L +D+ YE AK++AQ +S+
Sbjct: 410 LSGEVAWGLYETYGFPLDLTQILAEEHHLKIDLNGYEKAKEEAQIRSQSR 459
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
++PE+ G TSVEFCGGTH+ H+G I SEEAI+KG I++ G +
Sbjct: 710 ADPETGYGKTTSVEFCGGTHVLNTKHIGVLVIVSEEAISKGVRRIIALTGHEAERAQKEA 769
Query: 117 SINDEMVNKYPSLYRLFRTVHK--QKYVQDALNVS 149
D VN++ L ++H+ + D N++
Sbjct: 770 LRLDNEVNEFIKLVNQSISLHQNHNNNITDDFNIN 804
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 273 NDEGTVVGLRYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
+ E TV+ + Y +FV+SV S GI+L+K+ FYAE GGQ+YD GF+++
Sbjct: 505 DSEATVLAILYENKFVESVDLSSQMCGIILNKTIFYAESGGQLYDHGFITS 555
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT 277
L Y +FV+SV S GI+L+K+ FYAE GGQ+YD GF+ + DE T
Sbjct: 511 LAILYENKFVESVDLSSQMCGIILNKTIFYAESGGQLYDHGFITSLTDEVT 561
>gi|378980259|ref|YP_005228400.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|419972487|ref|ZP_14487915.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|419980165|ref|ZP_14495451.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|419983590|ref|ZP_14498740.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|419991124|ref|ZP_14506091.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|419997253|ref|ZP_14512050.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|420001053|ref|ZP_14515710.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|420008088|ref|ZP_14522579.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|420013615|ref|ZP_14527925.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|420019461|ref|ZP_14533654.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|420024952|ref|ZP_14538963.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|420029937|ref|ZP_14543765.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|420035665|ref|ZP_14549328.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|420042532|ref|ZP_14556025.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|420048042|ref|ZP_14561357.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|420053114|ref|ZP_14566293.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|420058784|ref|ZP_14571795.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|420065302|ref|ZP_14578108.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|420070900|ref|ZP_14583549.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|420075688|ref|ZP_14588163.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|420084291|ref|ZP_14596553.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|421913374|ref|ZP_16343059.1| Alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|421914415|ref|ZP_16344062.1| Alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|424932155|ref|ZP_18350527.1| Alanyl-tRNA synthetase (Alanine--tRNA ligase) [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|425082834|ref|ZP_18485931.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|428147858|ref|ZP_18995761.1| Alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
gi|428934710|ref|ZP_19008218.1| alanyl-tRNA ligase [Klebsiella pneumoniae JHCK1]
gi|428941317|ref|ZP_19014368.1| alanyl-tRNA ligase [Klebsiella pneumoniae VA360]
gi|364519670|gb|AEW62798.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
HS11286]
gi|397346476|gb|EJJ39590.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH2]
gi|397350896|gb|EJJ43982.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH1]
gi|397355222|gb|EJJ48232.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH4]
gi|397363046|gb|EJJ55689.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH6]
gi|397364473|gb|EJJ57103.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH5]
gi|397372578|gb|EJJ65062.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH7]
gi|397379698|gb|EJJ71889.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH9]
gi|397383649|gb|EJJ75783.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH8]
gi|397389153|gb|EJJ81103.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH10]
gi|397398255|gb|EJJ89920.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH11]
gi|397402396|gb|EJJ93999.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH12]
gi|397407682|gb|EJJ99067.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH14]
gi|397415986|gb|EJK07165.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH17]
gi|397416334|gb|EJK07509.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH16]
gi|397424531|gb|EJK15429.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH18]
gi|397431739|gb|EJK22410.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH20]
gi|397436622|gb|EJK27208.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH19]
gi|397440986|gb|EJK31374.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH21]
gi|397448187|gb|EJK38366.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH22]
gi|397450322|gb|EJK40430.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
KPNIH23]
gi|405599153|gb|EKB72329.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW2]
gi|407806342|gb|EKF77593.1| Alanyl-tRNA synthetase (Alanine--tRNA ligase) [Klebsiella
pneumoniae subsp. pneumoniae KpQ3]
gi|410112694|emb|CCM85684.1| Alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K26BO]
gi|410123171|emb|CCM86687.1| Alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST258-K28BO]
gi|426300663|gb|EKV62936.1| alanyl-tRNA ligase [Klebsiella pneumoniae VA360]
gi|426302156|gb|EKV64368.1| alanyl-tRNA ligase [Klebsiella pneumoniae JHCK1]
gi|427542179|emb|CCM91899.1| Alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
ST512-K30BO]
Length = 875
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDSVS+G EA ++LD++ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDSVSAGQEAVVILDQTPFYAESGGQVGDKG-------------------ELKGAGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLL-HTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + S TL+VGD ++ +D ARR+ I NH+ATH+++ AL
Sbjct: 519 ----FAVSDTQKYGQAIGHIGKVASGTLKVGDAVQADVDEARRQRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNA 448
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++ + EF G HL + V I + ++++ G V + G + D
Sbjct: 449 MIRVDGASEFKGYDHLELNGKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGD 508
Query: 121 E 121
+
Sbjct: 509 K 509
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VDSVS+G EA ++LD++ FYAE GGQ+ D+G + F +VS +
Sbjct: 468 GKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGDKGELKGAGFSFAVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VDSVS+G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDSVSAGQEAVVILDQTPFYAESGGQVGDKGELKGA 515
>gi|366993787|ref|XP_003676658.1| hypothetical protein NCAS_0E02290 [Naumovozyma castellii CBS 4309]
gi|342302525|emb|CCC70299.1| hypothetical protein NCAS_0E02290 [Naumovozyma castellii CBS 4309]
Length = 956
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 75/137 (54%), Gaps = 24/137 (17%)
Query: 324 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
+FVD ++ SG + G+LLDK+ FYAEQGGQ YD G ++ ++D ++ + L N
Sbjct: 512 KFVDEITESGKKYGVLLDKTCFYAEQGGQEYDTGKLV-IDDVAEFNVENVQLYN------ 564
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +L++ K L VGDK+ D RR PI +NHT THILN
Sbjct: 565 ----GFVFHTGSLEEGK------------LSVGDKIIASYDELRRFPIKNNHTGTHILNF 608
Query: 443 ALRFVLGPEADQKGSLV 459
AL LG E DQKGSLV
Sbjct: 609 ALLETLGNEVDQKGSLV 625
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+SK L G WRLYDTYGFPVDLT+LM EE+GL +D +E AK+++
Sbjct: 409 QSKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQES 455
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
Query: 273 NDEGTVVGLRYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVS 330
N E T++ L +FVD ++ SG + G+LLDK+ FYAEQGGQ YD G K +D V+
Sbjct: 499 NIESTILKLHDGTKFVDEITESGKKYGVLLDKTCFYAEQGGQEYDTG----KLVIDDVA 553
Score = 45.1 bits (105), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
L+ +FVD ++ SG + G+LLDK+ FYAEQGGQ YD G ++
Sbjct: 505 LKLHDGTKFVDEITESGKKYGVLLDKTCFYAEQGGQEYDTGKLV 548
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 60 PESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGSI 118
P S+ S+EFCGGTH+ + F I E IAKG IV+ GS F++ I
Sbjct: 706 PTSEEWGNYSIEFCGGTHVVKTGDIKYFVILEESGIAKGIRRIVAVTGSDA-FEAQ--RI 762
Query: 119 NDEMVNKYPSLYRL-FRTVHKQKYVQDALNVSCLSFRGVWEHGMSVGWTGV 168
+E + + +L F + ++K + +++ LS + +H + +T +
Sbjct: 763 ANEFSTELDAAEKLPFSPLKEKKLKELGVSLGQLSISVISKHELKERFTAI 813
>gi|256077790|ref|XP_002575183.1| alanyl-tRNA synthetase [Schistosoma mansoni]
Length = 980
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 78/137 (56%), Gaps = 24/137 (17%)
Query: 324 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
+FV+SV S GI+L+K+ FYAE GGQ+YD GF+ + DE
Sbjct: 518 KFVESVDLSSQMCGIILNKTIFYAESGGQLYDHGFITSLTDE------------------ 559
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+FS+S+++ + + + L L VG+++ L +DT RR +M NHT TH+LN
Sbjct: 560 ----VTEFSVSDVQCRGGYILHIGNLHGKLIVGNRVLLSLDTVRRTALMRNHTGTHVLNF 615
Query: 443 ALRFVLGPEADQKGSLV 459
ALR ++ E++QKGSLV
Sbjct: 616 ALRELVD-ESEQKGSLV 631
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 38/50 (76%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQ 63
L G+VAW LY+TYGFP+DLTQ++ EE L +D+ YE AK++AQ +S+
Sbjct: 410 LSGEVAWGLYETYGFPLDLTQILAEEHHLKIDLNGYEKAKEEAQIRSQSR 459
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
++PE+ G TSVEFCGGTH+ H+G I SEEAI+KG I++ G +
Sbjct: 710 ADPETGYGKTTSVEFCGGTHVLNTKHIGVLVIVSEEAISKGVRRIIALTGHEAERAQKEA 769
Query: 117 SINDEMVNKYPSLYRLFRTVHK--QKYVQDALNVS 149
D VN++ L ++H+ + D N++
Sbjct: 770 LRLDNEVNEFIKLVNQSISLHQNHNNNITDDFNIN 804
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 273 NDEGTVVGLRYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
+ E TV+ + Y +FV+SV S GI+L+K+ FYAE GGQ+YD GF++
Sbjct: 505 DSEATVLAILYENKFVESVDLSSQMCGIILNKTIFYAESGGQLYDHGFIT 554
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT 277
L Y +FV+SV S GI+L+K+ FYAE GGQ+YD GF+ + DE T
Sbjct: 511 LAILYENKFVESVDLSSQMCGIILNKTIFYAESGGQLYDHGFITSLTDEVT 561
>gi|440757502|ref|ZP_20936687.1| Alanyl-tRNA synthetase [Pantoea agglomerans 299R]
gi|436428748|gb|ELP26400.1| Alanyl-tRNA synthetase [Pantoea agglomerans 299R]
Length = 832
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 26/141 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD V++G +A ++LD++ FY E GGQ+ D G + G N E
Sbjct: 437 VDEVTAGQDAVVVLDETPFYGESGGQVGDTGLLKGKNAE--------------------- 475
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
FS+ + +K + + + L+ LR+GD+L+ +D ARR I NH+ATH+L+ AL
Sbjct: 476 ----FSVQDTQKYGQAIGHVGKLTAGQLRIGDRLEAQVDAARRARIRLNHSATHLLHAAL 531
Query: 445 RFVLGPEADQKGSLVYRYHLH 465
R VLG QKGSLV +L
Sbjct: 532 RQVLGEHVAQKGSLVNDKYLR 552
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG---- 65
+ L G++ +RLYDT+GFP DLT + E+ L +D +E A ++ + +G
Sbjct: 343 QGDTLDGEIVFRLYDTFGFPADLTADVCRERNLKIDEAGFEQAMEQQRQRAREASGFGAD 402
Query: 66 ------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGS 117
++ + F G L +A V ++ E + + G + V + G
Sbjct: 403 YSNVIRIDAASSFKGYDQLDLAATVKALYVAGEAVDEVTAGQDAVVVLDETPFYGESGGQ 462
Query: 118 IND 120
+ D
Sbjct: 463 VGD 465
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV 278
VD V++G +A ++LD++ FY E GGQ+ D G + G N E +V
Sbjct: 437 VDEVTAGQDAVVVLDETPFYGESGGQVGDTGLLKGKNAEFSV 478
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 277 TVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
TV L + VD V++G +A ++LD++ FY E GGQ+ D G + K
Sbjct: 426 TVKALYVAGEAVDEVTAGQDAVVVLDETPFYGESGGQVGDTGLLKGK 472
>gi|378765972|ref|YP_005194433.1| alanyl-tRNA synthetase [Pantoea ananatis LMG 5342]
gi|365185446|emb|CCF08396.1| Alanyl-tRNA synthetase [Pantoea ananatis LMG 5342]
Length = 875
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 81/150 (54%), Gaps = 26/150 (17%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+G N + VD++S+G +A I+LD++ FY E GGQ+ D G + G N
Sbjct: 471 KGLFVNGEAVDALSAGQDAVIVLDETPFYGESGGQVGDTGELKGNN-------------- 516
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHT 435
AL FS+ + +K + + + LS LRVGD+L+ +D ARR I NH+
Sbjct: 517 ------AL-----FSVKDTQKYGQAIGHIGKLSSGQLRVGDRLEAVVDEARRARIRLNHS 565
Query: 436 ATHILNHALRFVLGPEADQKGSLVYRYHLH 465
ATH+L+ ALR VLG QKGSLV +L
Sbjct: 566 ATHLLHAALRQVLGEHVAQKGSLVNDKYLR 595
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 15/162 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ +RLYDT+GFP DLT + E+ L +D +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETVFRLYDTFGFPADLTADVCRERNLKIDEAGFEKAMEQQRQRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++ + F G L + V ++ E +A++ G + V
Sbjct: 439 ASGFGADYSNMIRIDAASSFKGYEQLDLTATVKGLFVNGEAVDALSAGQDAVIVLDETPF 498
Query: 111 FQSHSGSINDEMVNKYPSLYRLFRTVHKQKYVQDALNVSCLS 152
+ G + D + LF QKY Q ++ LS
Sbjct: 499 YGESGGQVGD--TGELKGNNALFSVKDTQKYGQAIGHIGKLS 538
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
TV GL N + VD++S+G +A I+LD++ FY E GGQ+ D G + + SV +
Sbjct: 468 ATVKGLFVNGEAVDALSAGQDAVIVLDETPFYGESGGQVGDTGELKGNNALFSVKDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 7/59 (11%)
Query: 215 DLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
DL+ T FV N + VD++S+G +A I+LD++ FY E GGQ+ D G + G N
Sbjct: 465 DLTATVKGLFV-------NGEAVDALSAGQDAVIVLDETPFYGESGGQVGDTGELKGNN 516
>gi|353240909|emb|CCA72755.1| probable ALA1-alanyl-tRNA synthetase, cytosolic [Piriformospora
indica DSM 11827]
Length = 967
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 74/147 (50%), Gaps = 27/147 (18%)
Query: 315 YDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG-VNDESQIELWFSS 373
YD+ F S+ + +G GI+LD++ FYAE GGQ YD G + V D+
Sbjct: 518 YDKNFPSSTA---DIPAGAPFGIILDQTCFYAEAGGQEYDTGSIASDVKDQEA------- 567
Query: 374 LVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMS 432
+F + N + K V + + +L VGD + D RRRPI S
Sbjct: 568 ---------------KFEVVNCQSFKGYVLHIGQMEEGSLSVGDSVIATYDPDRRRPIRS 612
Query: 433 NHTATHILNHALRFVLGPEADQKGSLV 459
NHTATHILN+ LR VLG DQKGSLV
Sbjct: 613 NHTATHILNYGLREVLGDHIDQKGSLV 639
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY--EDAKKKAQSEPESQAGM 66
G VL G WRLYDTYGFPVDLT+LM EE L+VD E + A K S+ + G
Sbjct: 416 GGGTVLDGKDVWRLYDTYGFPVDLTRLMAEELNLTVDEEAFLAAQAHSKEASKGAGKVGA 475
Query: 67 ETSVEF 72
+ +V+
Sbjct: 476 KDTVKL 481
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 16/102 (15%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGME 67
L ++V+PG A +TY PV + L + ++ D+E P+ +
Sbjct: 683 LKSARVIPGLRA-VFGETYPDPVRVVTLEYDVDEIAKDLE-----------NPKWRG--- 727
Query: 68 TSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSK 108
TSVEFCGGTH+A + +F I E IAKG I++ G +
Sbjct: 728 TSVEFCGGTHVAKTGDIKEFTIMEESGIAKGIRRIIAVTGPE 769
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 3/50 (6%)
Query: 276 GTVVGLRYNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
T+ + Y+K F S + +G GI+LD++ FYAE GGQ YD G +++
Sbjct: 511 ATIKAIYYDKNFPSSTADIPAGAPFGIILDQTCFYAEAGGQEYDTGSIAS 560
Score = 38.5 bits (88), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEG 267
Y+K F S + +G GI+LD++ FYAE GGQ YD G
Sbjct: 518 YDKNFPSSTADIPAGAPFGIILDQTCFYAEAGGQEYDTG 556
>gi|448098085|ref|XP_004198838.1| Piso0_002228 [Millerozyma farinosa CBS 7064]
gi|359380260|emb|CCE82501.1| Piso0_002228 [Millerozyma farinosa CBS 7064]
Length = 960
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/139 (41%), Positives = 79/139 (56%), Gaps = 30/139 (21%)
Query: 325 FVDSV-SSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
FVD++ S+ E GILLDK+ FYAEQGGQ YD G ++ ++GS
Sbjct: 522 FVDTIDSTEKEYGILLDKTAFYAEQGGQEYDTGNLV-----------------IDGS--- 561
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
+F+++N++ V LHT + L+VG+++ + RR PI +NHT TH+L
Sbjct: 562 ----AEFNVTNVQVYGGYV--LHTGTMVEGILKVGNEVIATYNELRRWPIRNNHTGTHVL 615
Query: 441 NHALRFVLGPEADQKGSLV 459
N ALR VLG DQKGSLV
Sbjct: 616 NFALREVLGDSVDQKGSLV 634
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 37/60 (61%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
IA + L G WRLYDTYGFPVDLT+LM EE G +D E +E A+ +++ +S
Sbjct: 413 IASKTPEQTLSGRDVWRLYDTYGFPVDLTRLMAEEAGTKIDEEGFEKARLESREASKSNT 472
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 265 DEGFMIGVND-EGTVVGLRYNKQFVDSV-SSGTEAGILLDKSNFYAEQGGQIYDEG 318
D+ + G+++ + +V + FVD++ S+ E GILLDK+ FYAEQGGQ YD G
Sbjct: 499 DDSYKYGLDNVKAKIVEIFDGSSFVDTIDSTEKEYGILLDKTAFYAEQGGQEYDTG 554
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 28/36 (77%), Gaps = 1/36 (2%)
Query: 236 FVDSV-SSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
FVD++ S+ E GILLDK+ FYAEQGGQ YD G ++
Sbjct: 522 FVDTIDSTEKEYGILLDKTAFYAEQGGQEYDTGNLV 557
>gi|241956830|ref|XP_002421135.1| alanyl-tRNA synthetase, putative [Candida dubliniensis CD36]
gi|223644478|emb|CAX41294.1| alanyl-tRNA synthetase, putative [Candida dubliniensis CD36]
Length = 969
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 78/146 (53%), Gaps = 30/146 (20%)
Query: 318 GFMSNKQFVDSVSSGT-EAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
G +FV+S+ + + GILLDK+ FYAEQGGQ YD G ++
Sbjct: 522 GIYDGSKFVESIEDPSIQYGILLDKTPFYAEQGGQEYDTGKLV----------------- 564
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSN 433
++G +F+++N++ V LHT + L VGD++ D RR PI +N
Sbjct: 565 IDGKS-------EFNVANVQVYAGYV--LHTGNIVDGKLNVGDEIIATYDELRRWPIRNN 615
Query: 434 HTATHILNHALRFVLGPEADQKGSLV 459
HT THILN ALR VLG DQKGSLV
Sbjct: 616 HTGTHILNFALREVLGDGVDQKGSLV 641
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 37/53 (69%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
IA + L G WRLYDTYGFPVDLT+LM EE GL +D + +E AK++++
Sbjct: 419 IASKTPEQTLSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEDGFERAKEESR 471
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Query: 239 SVSSGTEAGILLDKSNFYA----EQGGQI--YDEGFMIGV-NDEGTVVGLRYNKQFVDSV 291
S SGT+ G L K + +A +Q I ++ F G+ N + VVG+ +FV+S+
Sbjct: 474 SKGSGTKDGKTLVKLDVHALSELDQNDTIPKTNDEFKYGLENVKAKVVGIYDGSKFVESI 533
Query: 292 SSGT-EAGILLDKSNFYAEQGGQIYDEG 318
+ + GILLDK+ FYAEQGGQ YD G
Sbjct: 534 EDPSIQYGILLDKTPFYAEQGGQEYDTG 561
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 40/84 (47%), Gaps = 15/84 (17%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + G+SVD ++P + E S+EFCGGTH+A
Sbjct: 700 ETYPDPVRVVSI-----GVSVD---------DLLADPTNAKWHEISIEFCGGTHVAKTGD 745
Query: 84 VGDFCISSEEAIAKG-SNIVSYCG 106
+ D I E IAKG IV+ G
Sbjct: 746 IKDLVIVEESGIAKGIRRIVAVTG 769
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%), Gaps = 1/37 (2%)
Query: 235 QFVDSVSSGT-EAGILLDKSNFYAEQGGQIYDEGFMI 270
+FV+S+ + + GILLDK+ FYAEQGGQ YD G ++
Sbjct: 528 KFVESIEDPSIQYGILLDKTPFYAEQGGQEYDTGKLV 564
>gi|365987223|ref|XP_003670443.1| hypothetical protein NDAI_0E03830 [Naumovozyma dairenensis CBS 421]
gi|343769213|emb|CCD25200.1| hypothetical protein NDAI_0E03830 [Naumovozyma dairenensis CBS 421]
Length = 956
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 75/137 (54%), Gaps = 24/137 (17%)
Query: 324 QFVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
FVDS++ G + GI+LDK+ FYAEQGGQ YD G ++ ++D ++ + L N
Sbjct: 512 NFVDSITEVGKKYGIILDKTCFYAEQGGQEYDTGKIV-IDDAAEFNVENVQLYN------ 564
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +L++ K L VGDK+ D RR PI +NHT THILN
Sbjct: 565 ----GFVFHTGSLEEGK------------LSVGDKIIASYDELRRFPIKNNHTGTHILNL 608
Query: 443 ALRFVLGPEADQKGSLV 459
AL+ LG + DQKGSLV
Sbjct: 609 ALKETLGADVDQKGSLV 625
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 35/47 (74%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
ESK L G WRLYDTYGFPVDLT+LM EE+ L +D +E AK+++
Sbjct: 409 ESKTLDGKQVWRLYDTYGFPVDLTELMAEEQNLKIDGPGFEKAKQES 455
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEGFMI 270
LR FVDS++ G + GI+LDK+ FYAEQGGQ YD G ++
Sbjct: 505 LRIHDGTNFVDSITEVGKKYGIILDKTCFYAEQGGQEYDTGKIV 548
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 59/113 (52%), Gaps = 5/113 (4%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
++P ++ + S+EFCGGTH+A + F + E IAKG IV+ GS+ F++
Sbjct: 704 ADPTNEEWNKYSIEFCGGTHVAKTGDIKYFVVLEESGIAKGIRRIVAVTGSEA-FEAQ-- 760
Query: 117 SINDEMVNKYPSLYRL-FRTVHKQKYVQDALNVSCLSFRGVWEHGMSVGWTGV 168
I +E ++ + +L F + ++K + + + LS + +H + +T +
Sbjct: 761 RIANEFASELETAEKLPFSPLKEKKLKELGVKLGQLSISVINKHELKEKFTAI 813
>gi|308187884|ref|YP_003932015.1| alanyl-tRNA synthetase [Pantoea vagans C9-1]
gi|308058394|gb|ADO10566.1| Alanyl-tRNA synthetase [Pantoea vagans C9-1]
Length = 875
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 26/141 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD V++G +A ++LD++ FY E GGQ+ D G + G N E
Sbjct: 480 VDEVTAGQDAVVVLDETPFYGESGGQVGDTGLLKGKNAE--------------------- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
FS+ + +K + + + L+ LR+GD+L+ +D ARR I NH+ATH+L+ AL
Sbjct: 519 ----FSVQDTQKYGQAIGHVGKLTAGQLRIGDRLEAQVDAARRARIRLNHSATHLLHAAL 574
Query: 445 RFVLGPEADQKGSLVYRYHLH 465
R VLG QKGSLV +L
Sbjct: 575 RQVLGEHVAQKGSLVNDKYLR 595
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG---- 65
+ L G++ +RLYDT+GFP DLT + E+ L +D +E A ++ + +G
Sbjct: 386 QGDTLDGEIVFRLYDTFGFPADLTADVCRERNLKIDEAGFEQAMEQQRQRAREASGFGAD 445
Query: 66 ------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGS 117
++ + F G L +A V ++ E + + G + V + G
Sbjct: 446 YSNVIRIDAASSFKGYDQLDLAATVKALYVAGEAVDEVTAGQDAVVVLDETPFYGESGGQ 505
Query: 118 IND 120
+ D
Sbjct: 506 VGD 508
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV 278
VD V++G +A ++LD++ FY E GGQ+ D G + G N E +V
Sbjct: 480 VDEVTAGQDAVVVLDETPFYGESGGQVGDTGLLKGKNAEFSV 521
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
TV L + VD V++G +A ++LD++ FY E GGQ+ D G + K
Sbjct: 468 ATVKALYVAGEAVDEVTAGQDAVVVLDETPFYGESGGQVGDTGLLKGK 515
>gi|304399190|ref|ZP_07381057.1| alanyl-tRNA synthetase [Pantoea sp. aB]
gi|304353244|gb|EFM17624.1| alanyl-tRNA synthetase [Pantoea sp. aB]
Length = 875
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 26/141 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD V++G +A ++LD++ FY E GGQ+ D G + G N E
Sbjct: 480 VDEVTAGQDAVVVLDETPFYGESGGQVGDTGLLKGKNAE--------------------- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
FS+ + +K + + + L+ LR+GD+L+ +D ARR I NH+ATH+L+ AL
Sbjct: 519 ----FSVQDTQKYGQAIGHVGKLTAGQLRIGDRLEAQVDAARRARIRLNHSATHLLHAAL 574
Query: 445 RFVLGPEADQKGSLVYRYHLH 465
R VLG QKGSLV +L
Sbjct: 575 RQVLGEHVAQKGSLVNDKYLR 595
Score = 46.2 bits (108), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG---- 65
+ L G++ +RLYDT+GFP DLT + E+ L +D +E A ++ + +G
Sbjct: 386 QGDTLDGEIVFRLYDTFGFPADLTADVCRERNLKIDEAGFEQAMEQQRQRAREASGFGAD 445
Query: 66 ------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGS 117
++ + F G L +A V ++ E + + G + V + G
Sbjct: 446 YSNVIRIDAASSFKGYDQLDLAATVKALYVAGEAVDEVTAGQDAVVVLDETPFYGESGGQ 505
Query: 118 IND 120
+ D
Sbjct: 506 VGD 508
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV 278
VD V++G +A ++LD++ FY E GGQ+ D G + G N E +V
Sbjct: 480 VDEVTAGQDAVVVLDETPFYGESGGQVGDTGLLKGKNAEFSV 521
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
TV L + VD V++G +A ++LD++ FY E GGQ+ D G + K
Sbjct: 468 ATVKALYVAGEAVDEVTAGQDAVVVLDETPFYGESGGQVGDTGLLKGK 515
>gi|390437363|ref|ZP_10225901.1| alanyl-tRNA ligase [Pantoea agglomerans IG1]
Length = 875
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 26/141 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD V++G +A ++LD++ FY E GGQ+ D G + G N E
Sbjct: 480 VDEVTAGQDAVVVLDETPFYGESGGQVGDTGLLKGKNAE--------------------- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
FS+ + +K + + + L+ LR+GD+L+ +D ARR I NH+ATH+L+ AL
Sbjct: 519 ----FSVQDTQKYGQAIGHVGKLTAGQLRIGDRLEAQVDAARRARIRLNHSATHLLHAAL 574
Query: 445 RFVLGPEADQKGSLVYRYHLH 465
R VLG QKGSLV +L
Sbjct: 575 RQVLGEHVAQKGSLVNDKYLR 595
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG---- 65
+ L G++ +RLYDT+GFP DLT + E+ L +D +E A ++ + +G
Sbjct: 386 QGDTLDGEIVFRLYDTFGFPADLTADVCRERNLKIDEAGFERAMEQQRQRAREASGFGAD 445
Query: 66 ------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGS 117
++ + F G L +A V ++ E + + G + V + G
Sbjct: 446 YSNVIRIDAASSFKGYDQLDLAATVKALYVAGEAVDEVTAGQDAVVVLDETPFYGESGGQ 505
Query: 118 IND 120
+ D
Sbjct: 506 VGD 508
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV 278
VD V++G +A ++LD++ FY E GGQ+ D G + G N E +V
Sbjct: 480 VDEVTAGQDAVVVLDETPFYGESGGQVGDTGLLKGKNAEFSV 521
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
TV L + VD V++G +A ++LD++ FY E GGQ+ D G + K
Sbjct: 468 ATVKALYVAGEAVDEVTAGQDAVVVLDETPFYGESGGQVGDTGLLKGK 515
>gi|407696919|ref|YP_006821707.1| phosphoserine aminotransferase, Methanosarcina type [Alcanivorax
dieselolei B5]
gi|407254257|gb|AFT71364.1| Phosphoserine aminotransferase, Methanosarcina type [Alcanivorax
dieselolei B5]
Length = 865
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 80/149 (53%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G + VDS+++G E ++L ++ FYAE GGQ+ D G ++ ++
Sbjct: 460 GLYKDGDVVDSLNAGDEGMVVLARTPFYAESGGQVGDTGLLVKGDN-------------- 505
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+F++++ KK++ TL + TL+VGDK+ ++D RR IM NH+A
Sbjct: 506 -----------RFAVADTKKRQSAHVHQGTLEAGTLKVGDKVDAYVDVERRNNIMRNHSA 554
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+++ ALR VLG QKGSLV +L
Sbjct: 555 THLMHAALRQVLGGHVQQKGSLVAPDYLR 583
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
IA L S+ LPGDV + LYDT+GFP DLT + E+GL+VDM +E
Sbjct: 369 AIASLQGSE-LPGDVVFALYDTHGFPPDLTADVARERGLTVDMAGFE 414
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 274 DEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
D+ +VGL + VDS+++G E ++L ++ FYAE GGQ+ D G +
Sbjct: 454 DQDEIVGLYKDGDVVDSLNAGDEGMVVLARTPFYAESGGQVGDTGLL 500
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGT- 295
VDS+++G E ++L ++ FYAE GGQ+ D G ++ ++ V + K+ V GT
Sbjct: 468 VDSLNAGDEGMVVLARTPFYAESGGQVGDTGLLVKGDNRFAVADTK--KRQSAHVHQGTL 525
Query: 296 EAGILL--DKSNFYAE 309
EAG L DK + Y +
Sbjct: 526 EAGTLKVGDKVDAYVD 541
>gi|222612529|gb|EEE50661.1| hypothetical protein OsJ_30891 [Oryza sativa Japonica Group]
Length = 901
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 121/261 (46%), Gaps = 54/261 (20%)
Query: 230 FSYNKQFVDSV--SSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQF 287
F K+ D+V S GT+A +L D + + ++ + + V+ EG + +Q
Sbjct: 346 FEKFKKAADAVKESGGTDAFVLWDTYGYPVDLT-EVMGVDYGLSVDREGFDAAMEEARQK 404
Query: 288 VDSVS-SGTEAGILLDKSNFYAE---QGGQIYDE----GFMSNKQFVDSVSSGTEA---- 335
+ E I+LD +N A+ QG D+ G+ N V ++ +G+E
Sbjct: 405 ARNARFKAGENSIVLD-ANATAQLRNQGLASTDDSPKYGYKDNDSVVKAIYTGSEYVSAA 463
Query: 336 ------GILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQ 389
G++L+ ++FYAEQGGQIYD G +EGS F
Sbjct: 464 SGDEDFGLVLESTSFYAEQGGQIYDTG-------------------KIEGS------FGS 498
Query: 390 FSLSNLKKKKKLVKLLHTLSHT-----LRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F+++N++ V LH S T L VGDK+ +D ARR I NHT TH+LN AL
Sbjct: 499 FNVTNVQVFAGYV--LHMGSFTKGSKALSVGDKVACKVDYARRALIAPNHTCTHMLNFAL 556
Query: 445 RFVLGPEADQKGSLVYRYHLH 465
R +LG DQKGS+V L
Sbjct: 557 REILGDHVDQKGSIVLPEKLR 577
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 35/47 (74%), Gaps = 4/47 (8%)
Query: 16 GDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQS 58
G A+ L+DTYG+PVDLT++M + GLSVD E + E+A++KA++
Sbjct: 361 GTDAFVLWDTYGYPVDLTEVMGVDYGLSVDREGFDAAMEEARQKARN 407
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSK 108
+ PES+ + S E CGGTH+ F + SEE IAKG ++ +K
Sbjct: 650 ANPESKEWLSISTELCGGTHIKNTSEAEAFALLSEEGIAKGVRRITAVTAK 700
>gi|344300271|gb|EGW30611.1| alanyl-tRNA synthetase, cytoplasmic [Spathaspora passalidarum NRRL
Y-27907]
Length = 959
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/140 (40%), Positives = 76/140 (54%), Gaps = 30/140 (21%)
Query: 324 QFVDSVSSGTEA-GILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
+FV ++ T+ GILLDK+ FYAEQGGQ YD G ++ ++G
Sbjct: 519 EFVTKINDSTKQYGILLDKTPFYAEQGGQEYDTGKLV-----------------IDGKS- 560
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHT---LRVGDKLKLHIDTARRRPIMSNHTATHI 439
+F++ N++ V LHT + T L VGD + D RR PI +NHT TH+
Sbjct: 561 ------EFTVDNVQVYGGYV--LHTGTITEGELSVGDSIIASYDELRRWPIRNNHTGTHV 612
Query: 440 LNHALRFVLGPEADQKGSLV 459
LN+ALR VLG DQKGSLV
Sbjct: 613 LNYALREVLGDSVDQKGSLV 632
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 36/53 (67%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
IA + L G WRLYDTYGFPVDLT+LM EE GL +D +E AK++++
Sbjct: 411 IASKTPEQTLSGKDVWRLYDTYGFPVDLTRLMAEEAGLKIDEPGFERAKEESR 463
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 27/37 (72%), Gaps = 1/37 (2%)
Query: 235 QFVDSVSSGTEA-GILLDKSNFYAEQGGQIYDEGFMI 270
+FV ++ T+ GILLDK+ FYAEQGGQ YD G ++
Sbjct: 519 EFVTKINDSTKQYGILLDKTPFYAEQGGQEYDTGKLV 555
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
S P++ E S+EFCGGTH+ + D + E IAKG IV+ G
Sbjct: 711 SNPKNPEWHEVSIEFCGGTHVGETGEIKDLVVIEESGIAKGIRRIVAVTG 760
>gi|372275051|ref|ZP_09511087.1| alanyl-tRNA synthetase [Pantoea sp. SL1_M5]
Length = 875
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 26/141 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD V++G +A ++LD++ FY E GGQ+ D G + G N E
Sbjct: 480 VDEVTAGQDAVVVLDETPFYGESGGQVGDTGLLKGKNAE--------------------- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
FS+ + +K + + + L+ LR+GD+L+ +D ARR I NH+ATH+L+ AL
Sbjct: 519 ----FSVQDTQKYGQAIGHVGKLTAGQLRIGDRLEAQVDAARRARIRLNHSATHLLHAAL 574
Query: 445 RFVLGPEADQKGSLVYRYHLH 465
R VLG QKGSLV +L
Sbjct: 575 RQVLGEHVAQKGSLVNDKYLR 595
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG---- 65
+ L G++ +RLYDT+GFP DLT + E+ L +D +E A ++ + +G
Sbjct: 386 QGDTLDGEIVFRLYDTFGFPADLTADVCRERNLKIDEAGFERAMEQQRQRAREASGFGAD 445
Query: 66 ------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGS 117
++ + F G L +A V ++ E + + G + V + G
Sbjct: 446 YSNVIRIDAASSFKGYDQLDLAATVKALYVAGEAVDEVTAGQDAVVVLDETPFYGESGGQ 505
Query: 118 IND 120
+ D
Sbjct: 506 VGD 508
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV 278
VD V++G +A ++LD++ FY E GGQ+ D G + G N E +V
Sbjct: 480 VDEVTAGQDAVVVLDETPFYGESGGQVGDTGLLKGKNAEFSV 521
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
TV L + VD V++G +A ++LD++ FY E GGQ+ D G + K
Sbjct: 468 ATVKALYVAGEAVDEVTAGQDAVVVLDETPFYGESGGQVGDTGLLKGK 515
>gi|317049269|ref|YP_004116917.1| alanyl-tRNA synthetase [Pantoea sp. At-9b]
gi|316950886|gb|ADU70361.1| alanyl-tRNA synthetase [Pantoea sp. At-9b]
Length = 875
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 74/143 (51%), Gaps = 26/143 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q VD VS+G +A ++LD++ FY E GGQ+ D G + G N E
Sbjct: 478 QQVDHVSAGQDAVVVLDETPFYGESGGQVGDTGVLAGNNAE------------------- 518
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
FS+ + +K + + + L+ LRVGD+L +D RR I NH+ATH+L+
Sbjct: 519 ------FSVQDTQKYGQAIGHIGKLTQGQLRVGDRLNAQVDEERRARIRLNHSATHLLHA 572
Query: 443 ALRFVLGPEADQKGSLVYRYHLH 465
ALR VLG QKGSLV +L
Sbjct: 573 ALRQVLGDHVAQKGSLVNDKYLR 595
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 60/130 (46%), Gaps = 13/130 (10%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ +RLYDT+GFPVDLT + E+ L +D +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETVFRLYDTFGFPVDLTADVCRERDLKIDEAGFEVAMEQQRQRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSEEA--IAKGSNIVSYCGSKGT 110
+G ++++ F G LA+A V + ++ ++ G + V
Sbjct: 439 ASGFGADYNNVIRIDSASAFKGYDQLALASTVQALFVDGQQVDHVSAGQDAVVVLDETPF 498
Query: 111 FQSHSGSIND 120
+ G + D
Sbjct: 499 YGESGGQVGD 508
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV 278
Q VD VS+G +A ++LD++ FY E GGQ+ D G + G N E +V
Sbjct: 478 QQVDHVSAGQDAVVVLDETPFYGESGGQVGDTGVLAGNNAEFSV 521
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 277 TVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS--NKQF 325
TV L + Q VD VS+G +A ++LD++ FY E GGQ+ D G ++ N +F
Sbjct: 469 TVQALFVDGQQVDHVSAGQDAVVVLDETPFYGESGGQVGDTGVLAGNNAEF 519
>gi|398801686|ref|ZP_10560924.1| alanine--tRNA ligase [Pantoea sp. GM01]
gi|398091370|gb|EJL81815.1| alanine--tRNA ligase [Pantoea sp. GM01]
Length = 875
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 74/143 (51%), Gaps = 26/143 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q V+ +S+G +A ++LD++ FY E GGQ+ D G + G N E
Sbjct: 478 QQVEQISAGQDAVVVLDETPFYGESGGQVGDTGVLAGQNAE------------------- 518
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
FS+ + +K K + + LS LRVGD+L +D RR I NH+ATH+L+
Sbjct: 519 ------FSVQDTQKYGKAIGHIGKLSSGQLRVGDRLHAQVDETRRARIRLNHSATHLLHA 572
Query: 443 ALRFVLGPEADQKGSLVYRYHLH 465
ALR VLG QKGSLV +L
Sbjct: 573 ALRQVLGDHVGQKGSLVNDKYLR 595
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ +RLYDT+GFP DLT + E+ L +D +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETVFRLYDTFGFPADLTADVCRERNLKIDEAGFEAAMEQQRQRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++ + +F G HL + V + + E I+ G + V
Sbjct: 439 ASGFGADYNNVIRIDAATDFKGYDHLELNAVVQALFVDGQQVEQISAGQDAVVVLDETPF 498
Query: 111 FQSHSGSIND 120
+ G + D
Sbjct: 499 YGESGGQVGD 508
Score = 41.6 bits (96), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 30/44 (68%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV 278
Q V+ +S+G +A ++LD++ FY E GGQ+ D G + G N E +V
Sbjct: 478 QQVEQISAGQDAVVVLDETPFYGESGGQVGDTGVLAGQNAEFSV 521
>gi|419764366|ref|ZP_14290606.1| alanine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae DSM
30104]
gi|397742949|gb|EJK90167.1| alanine-tRNA ligase [Klebsiella pneumoniae subsp. pneumoniae DSM
30104]
Length = 427
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 86/154 (55%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDSVS+G EA ++LD++ FYAE GGQ+ D+G L+G+ ++
Sbjct: 32 VDSVSAGQEAVVILDQTPFYAESGGQVGDKG-------------------ELKGAGFS-- 70
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + + S +L+VGD ++ +D ARR+ I NH+ATH+++ AL
Sbjct: 71 ----FAVSDTQKYGQAIGHIGKVASGSLKVGDAVQADVDEARRQRIRLNHSATHLMHAAL 126
Query: 445 RFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
R VLG QKGSLV L H M+ EE
Sbjct: 127 RQVLGTHVAQKGSLVNDKALRFDFSHFEAMKPEE 160
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVS 330
G V L + + VDSVS+G EA ++LD++ FYAE GGQ+ D+G + F +VS
Sbjct: 20 GKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGDKGELKGAGFSFAVS 74
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VDSVS+G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 32 VDSVSAGQEAVVILDQTPFYAESGGQVGDKGELKG 66
>gi|14589381|gb|AAK70636.1|AC091238_14 Putative cytosolic tRNA-Ala synthetase [Oryza sativa Japonica
Group]
Length = 694
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 121/261 (46%), Gaps = 54/261 (20%)
Query: 230 FSYNKQFVDSV--SSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQF 287
F K+ D+V S GT+A +L D + + ++ + + V+ EG + +Q
Sbjct: 139 FEKFKKAADAVKESGGTDAFVLWDTYGYPVDLT-EVMGVDYGLSVDREGFDAAMEEARQK 197
Query: 288 VDSVS-SGTEAGILLDKSNFYAE---QGGQIYDE----GFMSNKQFVDSVSSGTEA---- 335
+ E I+LD +N A+ QG D+ G+ N V ++ +G+E
Sbjct: 198 ARNARFKAGENSIVLD-ANATAQLRNQGLASTDDSPKYGYKDNDSVVKAIYTGSEYVSAA 256
Query: 336 ------GILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQ 389
G++L+ ++FYAEQGGQIYD G +EGS F
Sbjct: 257 SGDEDFGLVLESTSFYAEQGGQIYDTG-------------------KIEGS------FGS 291
Query: 390 FSLSNLKKKKKLVKLLHTLSHT-----LRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F+++N++ V LH S T L VGDK+ +D ARR I NHT TH+LN AL
Sbjct: 292 FNVTNVQVFAGYV--LHMGSFTKGSKALSVGDKVACKVDYARRALIAPNHTCTHMLNFAL 349
Query: 445 RFVLGPEADQKGSLVYRYHLH 465
R +LG DQKGS+V L
Sbjct: 350 REILGDHVDQKGSIVLPEKLR 370
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 34/47 (72%), Gaps = 4/47 (8%)
Query: 16 GDVAWRLYDTYGFPVDLTQLMVEEKGLSVDME----VYEDAKKKAQS 58
G A+ L+DTYG+PVDLT++M + GLSVD E E+A++KA++
Sbjct: 154 GTDAFVLWDTYGYPVDLTEVMGVDYGLSVDREGFDAAMEEARQKARN 200
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSK 108
+ PES+ + S E CGGTH+ F + SEE IAKG ++ +K
Sbjct: 443 ANPESKEWLSISTELCGGTHIKNTSEAEAFALLSEEGIAKGVRRITAVTAK 493
>gi|344229501|gb|EGV61386.1| hypothetical protein CANTEDRAFT_109802 [Candida tenuis ATCC 10573]
Length = 953
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/159 (37%), Positives = 83/159 (52%), Gaps = 36/159 (22%)
Query: 325 FVDSVSSGT--EAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
FV+ VS T + GILLD++ FYAEQGGQ YD G K+
Sbjct: 514 FVEVVSDTTSKQYGILLDRTPFYAEQGGQEYDTG------------------------KF 549
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHTATHI 439
+ +F++ N++ V LHT + +++VGD++ D RR PI +NHT TH+
Sbjct: 550 VIDGQAEFNVENVQVYAGYV--LHTGNLVEGSIKVGDEVIAGYDELRRWPIRNNHTGTHV 607
Query: 440 LNHALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
LN+ALR VLG DQKGSLV L H+ ++ EE
Sbjct: 608 LNYALREVLGNSVDQKGSLVAPEKLRFDFSHKQALKPEE 646
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 37/53 (69%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
IA + L G WRLYDTYGFPVDLT+LM EE GLS+D +E AK++++
Sbjct: 404 IASKTPEQTLSGKDVWRLYDTYGFPVDLTRLMAEEAGLSIDEVGFEKAKEESR 456
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 3/57 (5%)
Query: 265 DEGFMIGVND-EGTVVGLRYNKQFVDSVSSGT--EAGILLDKSNFYAEQGGQIYDEG 318
D+ + G+++ + VV + FV+ VS T + GILLD++ FYAEQGGQ YD G
Sbjct: 491 DDSYKYGLDNIKAKVVAIYDGAGFVEVVSDTTSKQYGILLDRTPFYAEQGGQEYDTG 547
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
S P+++ SVEFCGGTH+ + D I E IAKG IV+ G++
Sbjct: 706 SNPDNKDWYHFSVEFCGGTHVTKTGDIKDLVIIEESGIAKGIRRIVAVTGTEA 758
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 28/38 (73%), Gaps = 3/38 (7%)
Query: 236 FVDSVSSGT--EAGILLDKSNFYAEQGGQIYDEG-FMI 270
FV+ VS T + GILLD++ FYAEQGGQ YD G F+I
Sbjct: 514 FVEVVSDTTSKQYGILLDRTPFYAEQGGQEYDTGKFVI 551
>gi|398792409|ref|ZP_10553040.1| alanine--tRNA ligase [Pantoea sp. YR343]
gi|398213138|gb|EJM99733.1| alanine--tRNA ligase [Pantoea sp. YR343]
Length = 875
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 76/150 (50%), Gaps = 26/150 (17%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
E + Q V+ +++G +A ++LD++ FY E GGQ+ D G + G N E
Sbjct: 471 EALFVDGQQVEQINAGQDAVVVLDETPFYGESGGQVGDTGVLAGQNAE------------ 518
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHT 435
FS+ + +K K + + LS LRVGD+L +D RR I NH+
Sbjct: 519 -------------FSVQDTQKYGKAIGHIGKLSSGQLRVGDRLHAQVDETRRARIRLNHS 565
Query: 436 ATHILNHALRFVLGPEADQKGSLVYRYHLH 465
ATH+L+ ALR VLG QKGSLV +L
Sbjct: 566 ATHLLHAALRQVLGDHVGQKGSLVNDKYLR 595
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ +RLYDT+GFP DLT + E+ L +D +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETVFRLYDTFGFPADLTADVCRERNLKIDEAGFEAAMEQQRQRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++ + +F G HL + V + + E I G + V
Sbjct: 439 ASGFGADYNNVIRIDAATDFKGYDHLELNATVEALFVDGQQVEQINAGQDAVVVLDETPF 498
Query: 111 FQSHSGSIND 120
+ G + D
Sbjct: 499 YGESGGQVGD 508
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV 278
Q V+ +++G +A ++LD++ FY E GGQ+ D G + G N E +V
Sbjct: 478 QQVEQINAGQDAVVVLDETPFYGESGGQVGDTGVLAGQNAEFSV 521
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS--NKQF 325
TV L + Q V+ +++G +A ++LD++ FY E GGQ+ D G ++ N +F
Sbjct: 468 ATVEALFVDGQQVEQINAGQDAVVVLDETPFYGESGGQVGDTGVLAGQNAEF 519
>gi|390601960|gb|EIN11353.1| hypothetical protein PUNSTDRAFT_141744 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 956
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 77/144 (53%), Gaps = 32/144 (22%)
Query: 322 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI--GVNDESQIELWFSSLVN 376
NKQF+ S ++ GT G+LLD+++FYAE GGQ YD G ++ GV D
Sbjct: 512 NKQFLPSSSGITEGTTFGLLLDRTSFYAEAGGQEYDTGNIVIDGVAD------------- 558
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHT 435
F ++N++ V + L + L VG+++ D RR P+ +NHT
Sbjct: 559 -------------FEVTNVQTFNGYVLHIGHLKYGNLEVGNQVVSSYDELRRWPLRNNHT 605
Query: 436 ATHILNHALRFVLGPEADQKGSLV 459
ATHILN ALR VLG DQKGSLV
Sbjct: 606 ATHILNFALREVLGDHIDQKGSLV 629
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 2/56 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGME 67
K L G WRLYDTYGFPVDLT LM EE GL V+ +E+A +A S+ S+A ++
Sbjct: 412 KDLSGKDVWRLYDTYGFPVDLTLLMAEELGLGVNQAEFEEA--QAASKEASKASLK 465
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 34/48 (70%), Gaps = 5/48 (10%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI--GVND 274
YNKQF+ S ++ GT G+LLD+++FYAE GGQ YD G ++ GV D
Sbjct: 511 YNKQFLPSSSGITEGTTFGLLLDRTSFYAEAGGQEYDTGNIVIDGVAD 558
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 32/49 (65%), Gaps = 3/49 (6%)
Query: 273 NDEGTVVGLRYNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
N + + YNKQF+ S ++ GT G+LLD+++FYAE GGQ YD G
Sbjct: 501 NITAEIKAIYYNKQFLPSSSGITEGTTFGLLLDRTSFYAEAGGQEYDTG 549
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 22/31 (70%)
Query: 68 TSVEFCGGTHLAMAHHVGDFCISSEEAIAKG 98
TSVEFCGGTH+A + DF I+ E IAKG
Sbjct: 718 TSVEFCGGTHVAKTGDIKDFIITEESGIAKG 748
>gi|438000051|ref|YP_007183784.1| alanyl-tRNA synthetase [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451812980|ref|YP_007449433.1| alanyl-tRNA synthetase [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
gi|429339285|gb|AFZ83707.1| alanyl-tRNA synthetase [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451778949|gb|AGF49829.1| alanyl-tRNA synthetase [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
Length = 873
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 74/138 (53%), Gaps = 24/138 (17%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
+ +FVDS+ + A I+LD++ FYAE GGQ+ D+GF+I S +F L S
Sbjct: 473 DSKFVDSIGTKDSANIILDRTPFYAESGGQVGDKGFLI-----SDTANFFVKNTTLFSSV 527
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+ +L+ S +++VGD L+ ID R+ I NH+ATHI++
Sbjct: 528 FVHAGYLE-------------------SGSIKVGDILRASIDIENRKNISRNHSATHIMH 568
Query: 442 HALRFVLGPEADQKGSLV 459
ALR VLG A QKGSLV
Sbjct: 569 KALRNVLGMHAVQKGSLV 586
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETS 69
+ GD+ + LYDTYGFP DLT + E G+SVD+E +E A K + + ++S
Sbjct: 386 IFSGDILFNLYDTYGFPADLTADVCREHGISVDIESFELAMSKQRDKARLSGKFKSS 442
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
V+ + + +FVDS+ + A I+LD++ FYAE GGQ+ D+GF+
Sbjct: 467 VIAIYVDSKFVDSIGTKDSANIILDRTPFYAESGGQVGDKGFL 509
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 31/45 (68%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
K + + +FVDS+ + A I+LD++ FYAE GGQ+ D+GF+I
Sbjct: 466 KVIAIYVDSKFVDSIGTKDSANIILDRTPFYAESGGQVGDKGFLI 510
>gi|151945412|gb|EDN63655.1| alanyl-tRNA synthetase [Saccharomyces cerevisiae YJM789]
Length = 958
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 74/137 (54%), Gaps = 24/137 (17%)
Query: 324 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++ ++D ++ + L N
Sbjct: 512 NFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV-IDDAAEFNVENVQLYN------ 564
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +L++ K L VGDK+ D RR PI +NHT THILN
Sbjct: 565 ----GFVFHTGSLEEGK------------LSVGDKIIASFDELRRFPIKNNHTGTHILNF 608
Query: 443 ALRFVLGPEADQKGSLV 459
AL+ LG + DQKGSLV
Sbjct: 609 ALKETLGNDVDQKGSLV 625
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
ESK L G WRLYDTYGFPVDLT+LM EE+GL +D +E AK+++
Sbjct: 409 ESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQES 455
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
L+ FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++
Sbjct: 505 LKLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV 548
>gi|190407630|gb|EDV10897.1| alanyl-tRNA synthetase [Saccharomyces cerevisiae RM11-1a]
gi|207340860|gb|EDZ69081.1| YOR335Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259149812|emb|CAY86616.1| Ala1p [Saccharomyces cerevisiae EC1118]
gi|323352223|gb|EGA84760.1| Ala1p [Saccharomyces cerevisiae VL3]
Length = 958
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 74/137 (54%), Gaps = 24/137 (17%)
Query: 324 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++ ++D ++ + L N
Sbjct: 512 NFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV-IDDAAEFNVENVQLYN------ 564
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +L++ K L VGDK+ D RR PI +NHT THILN
Sbjct: 565 ----GFVFHTGSLEEGK------------LSVGDKIIASFDELRRFPIKNNHTGTHILNF 608
Query: 443 ALRFVLGPEADQKGSLV 459
AL+ LG + DQKGSLV
Sbjct: 609 ALKETLGNDVDQKGSLV 625
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
ESK L G WRLYDTYGFPVDLT+LM EE+GL +D +E AK+++
Sbjct: 409 ESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQES 455
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
L+ FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++
Sbjct: 505 LKLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV 548
>gi|398366285|ref|NP_014980.3| alanine--tRNA ligase [Saccharomyces cerevisiae S288c]
gi|1163069|emb|CAA89980.1| ALA1 [Saccharomyces cerevisiae]
gi|1420729|emb|CAA99658.1| ALA1 [Saccharomyces cerevisiae]
gi|285815203|tpg|DAA11096.1| TPA: alanine--tRNA ligase [Saccharomyces cerevisiae S288c]
gi|392296662|gb|EIW07764.1| Ala1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 958
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 74/137 (54%), Gaps = 24/137 (17%)
Query: 324 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++ ++D ++ + L N
Sbjct: 512 NFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV-IDDAAEFNVENVQLYN------ 564
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +L++ K L VGDK+ D RR PI +NHT THILN
Sbjct: 565 ----GFVFHTGSLEEGK------------LSVGDKIIASFDELRRFPIKNNHTGTHILNF 608
Query: 443 ALRFVLGPEADQKGSLV 459
AL+ LG + DQKGSLV
Sbjct: 609 ALKETLGNDVDQKGSLV 625
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
ESK L G WRLYDTYGFPVDLT+LM EE+GL +D +E AK+++
Sbjct: 409 ESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQES 455
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
L+ FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++
Sbjct: 505 LKLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV 548
>gi|323303022|gb|EGA56826.1| Ala1p [Saccharomyces cerevisiae FostersB]
Length = 810
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 74/137 (54%), Gaps = 24/137 (17%)
Query: 324 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++ ++D ++ + L N
Sbjct: 512 NFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV-IDDAAEFNVENVQLYN------ 564
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +L++ K L VGDK+ D RR PI +NHT THILN
Sbjct: 565 ----GFVFHTGSLEEGK------------LSVGDKIIASFDELRRFPIKNNHTGTHILNF 608
Query: 443 ALRFVLGPEADQKGSLV 459
AL+ LG + DQKGSLV
Sbjct: 609 ALKETLGNDVDQKGSLV 625
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
ESK L G WRLYDTYGFPVDLT+LM EE+GL +D +E AK+++
Sbjct: 409 ESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQES 455
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
L+ FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++
Sbjct: 505 LKLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV 548
>gi|609338|gb|AAC49007.1| cytoplasmic alanyl-tRNA synthetase [Saccharomyces cerevisiae]
gi|1097386|prf||2113423A Ala-tRNA synthetase
Length = 958
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 74/137 (54%), Gaps = 24/137 (17%)
Query: 324 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++ ++D ++ + L N
Sbjct: 512 NFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV-IDDAAEFNVENVQLYN------ 564
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +L++ K L VGDK+ D RR PI +NHT THILN
Sbjct: 565 ----GFVFHTGSLEEGK------------LSVGDKIIASFDELRRFPIKNNHTGTHILNF 608
Query: 443 ALRFVLGPEADQKGSLV 459
AL+ LG + DQKGSLV
Sbjct: 609 ALKETLGNDVDQKGSLV 625
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
ESK L G WRLYDTYGFPVDLT+LM EE+GL +D +E AK+++
Sbjct: 409 ESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQES 455
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
L+ FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++
Sbjct: 505 LKLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV 548
>gi|349581482|dbj|GAA26640.1| K7_Ala1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 958
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 74/137 (54%), Gaps = 24/137 (17%)
Query: 324 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++ ++D ++ + L N
Sbjct: 512 NFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV-IDDAAEFNVENVQLYN------ 564
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +L++ K L VGDK+ D RR PI +NHT THILN
Sbjct: 565 ----GFVFHTGSLEEGK------------LSVGDKIIASFDELRRFPIKNNHTGTHILNF 608
Query: 443 ALRFVLGPEADQKGSLV 459
AL+ LG + DQKGSLV
Sbjct: 609 ALKETLGNDVDQKGSLV 625
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
ESK L G WRLYDTYGFPVDLT+LM EE+GL +D +E AK+++
Sbjct: 409 ESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQES 455
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
L+ FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++
Sbjct: 505 LKLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV 548
>gi|256272535|gb|EEU07514.1| Ala1p [Saccharomyces cerevisiae JAY291]
Length = 958
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 74/137 (54%), Gaps = 24/137 (17%)
Query: 324 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++ ++D ++ + L N
Sbjct: 512 NFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV-IDDAAEFNVENVQLYN------ 564
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +L++ K L VGDK+ D RR PI +NHT THILN
Sbjct: 565 ----GFVFHTGSLEEGK------------LSVGDKIIASFDELRRFPIKNNHTGTHILNF 608
Query: 443 ALRFVLGPEADQKGSLV 459
AL+ LG + DQKGSLV
Sbjct: 609 ALKETLGNDVDQKGSLV 625
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
ESK L G WRLYDTYGFPVDLT+LM EE+GL +D +E AK+++
Sbjct: 409 ESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQES 455
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
L+ FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++
Sbjct: 505 LKLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV 548
>gi|416898954|ref|ZP_11928436.1| alanyl-tRNA synthetase [Escherichia coli STEC_7v]
gi|327251414|gb|EGE63100.1| alanyl-tRNA synthetase [Escherichia coli STEC_7v]
Length = 784
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 85/154 (55%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + GVN FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGVN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 30/37 (81%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + GVN
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGVN 424
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGVNF 425
>gi|453082882|gb|EMF10929.1| alanyl-tRNA synthetase [Mycosphaerella populorum SO2202]
Length = 1007
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 83/144 (57%), Gaps = 32/144 (22%)
Query: 322 NKQFVDSVSS---GTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+++F+ S S G + G++LDK+NFYAEQGGQ D G ++ ++ E++I++
Sbjct: 561 DRKFIKSTSEIPEGEQFGVILDKTNFYAEQGGQENDTGRIL-IDGEAEIKV--------- 610
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHT 435
N+++ V +HT +L+VGD++ D RR+PI +NHT
Sbjct: 611 --------------DNVQQYAGYV--MHTGYVEYGSLKVGDEVLSEYDELRRQPIRNNHT 654
Query: 436 ATHILNHALRFVLGPEADQKGSLV 459
THILN+ALR VLG + +QKGSLV
Sbjct: 655 GTHILNYALREVLGDDVNQKGSLV 678
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 43/58 (74%), Gaps = 4/58 (6%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLS-VDMEVYEDAKKKAQ--SEPESQAG 65
+K L G WRLYDTYGFPVDLT+LM +E+GL +D +V E A++KA+ S+ E +AG
Sbjct: 461 TKTLAGADVWRLYDTYGFPVDLTRLMCDERGLEIIDKDVAE-AQEKAREASKGEKKAG 517
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 10/68 (14%)
Query: 213 LGDLSQTKHTPFVKRLRFS-------YNKQFVDSVSS---GTEAGILLDKSNFYAEQGGQ 262
+ D+ +T TP +R ++++F+ S S G + G++LDK+NFYAEQGGQ
Sbjct: 534 MPDVPKTDDTPKFQRDNIKATIKAIYHDRKFIKSTSEIPEGEQFGVILDKTNFYAEQGGQ 593
Query: 263 IYDEGFMI 270
D G ++
Sbjct: 594 ENDTGRIL 601
>gi|313104284|sp|P40825.3|SYA_YEAST RecName: Full=Alanine--tRNA ligase, mitochondrial; AltName:
Full=Alanyl-tRNA synthetase; Short=AlaRS; Flags:
Precursor
Length = 983
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 74/137 (54%), Gaps = 24/137 (17%)
Query: 324 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++ ++D ++ + L N
Sbjct: 537 NFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV-IDDAAEFNVENVQLYN------ 589
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +L++ K L VGDK+ D RR PI +NHT THILN
Sbjct: 590 ----GFVFHTGSLEEGK------------LSVGDKIIASFDELRRFPIKNNHTGTHILNF 633
Query: 443 ALRFVLGPEADQKGSLV 459
AL+ LG + DQKGSLV
Sbjct: 634 ALKETLGNDVDQKGSLV 650
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
ESK L G WRLYDTYGFPVDLT+LM EE+GL +D +E AK+++
Sbjct: 434 ESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQES 480
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
L+ FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++
Sbjct: 530 LKLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV 573
>gi|206578751|ref|YP_002236967.1| alanyl-tRNA synthetase [Klebsiella pneumoniae 342]
gi|206567809|gb|ACI09585.1| alanyl-tRNA synthetase [Klebsiella pneumoniae 342]
Length = 875
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDSVS+G EA ++LD++ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDSVSAGQEAVVILDQTPFYAESGGQVGDKG-------------------ELKGAGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLL-HTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + S +L+VGD ++ +D ARR+ I NH+ATH+++ AL
Sbjct: 519 ----FAVSDTQKYGQAIGHIGKVASGSLKVGDAVQADVDEARRQRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNA 448
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++ + EF G HL + V I + ++++ G V + G + D
Sbjct: 449 MIRVDGASEFKGYDHLELNGKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGD 508
Query: 121 E 121
+
Sbjct: 509 K 509
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VDSVS+G EA ++LD++ FYAE GGQ+ D+G + F +VS +
Sbjct: 468 GKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGDKGELKGAGFSFAVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VDSVS+G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDSVSAGQEAVVILDQTPFYAESGGQVGDKGELKGA 515
>gi|288933924|ref|YP_003437983.1| alanyl-tRNA synthetase [Klebsiella variicola At-22]
gi|290510997|ref|ZP_06550366.1| alanyl-tRNA synthetase [Klebsiella sp. 1_1_55]
gi|288888653|gb|ADC56971.1| alanyl-tRNA synthetase [Klebsiella variicola At-22]
gi|289775990|gb|EFD83989.1| alanyl-tRNA synthetase [Klebsiella sp. 1_1_55]
Length = 875
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDSVS+G EA ++LD++ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDSVSAGQEAVVILDQTPFYAESGGQVGDKG-------------------ELKGAGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLL-HTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + S +L+VGD ++ +D ARR+ I NH+ATH+++ AL
Sbjct: 519 ----FAVSDTQKYGQAIGHIGKVASGSLKVGDAVQADVDEARRQRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNA 448
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++ EF G HL + V I + ++++ G V + G + D
Sbjct: 449 MIRVDGVSEFKGYDHLELNGKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGD 508
Query: 121 E 121
+
Sbjct: 509 K 509
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VDSVS+G EA ++LD++ FYAE GGQ+ D+G + F +VS +
Sbjct: 468 GKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGDKGELKGAGFSFAVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VDSVS+G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDSVSAGQEAVVILDQTPFYAESGGQVGDKGELKGA 515
>gi|323331402|gb|EGA72819.1| Ala1p [Saccharomyces cerevisiae AWRI796]
Length = 648
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 74/137 (54%), Gaps = 24/137 (17%)
Query: 324 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++ ++D ++ + L N
Sbjct: 512 NFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV-IDDAAEFNVENVQLYN------ 564
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +L++ K L VGDK+ D RR PI +NHT THILN
Sbjct: 565 ----GFVFHTGSLEEGK------------LSVGDKIIASFDELRRFPIKNNHTGTHILNF 608
Query: 443 ALRFVLGPEADQKGSLV 459
AL+ LG + DQKGSLV
Sbjct: 609 ALKETLGNDVDQKGSLV 625
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 38/53 (71%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+ A ESK L G WRLYDTYGFPVDLT+LM EE+GL +D +E AK+++
Sbjct: 403 SAASKTESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQES 455
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
L+ FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++
Sbjct: 505 LKLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV 548
>gi|323307226|gb|EGA60508.1| Ala1p [Saccharomyces cerevisiae FostersO]
Length = 833
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 74/137 (54%), Gaps = 24/137 (17%)
Query: 324 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++ ++D ++ + L N
Sbjct: 512 NFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV-IDDAAEFNVENVQLYN------ 564
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +L++ K L VGDK+ D RR PI +NHT THILN
Sbjct: 565 ----GFVFHTGSLEEGK------------LSVGDKIIASFDELRRFPIKNNHTGTHILNF 608
Query: 443 ALRFVLGPEADQKGSLV 459
AL+ LG + DQKGSLV
Sbjct: 609 ALKETLGNDVDQKGSLV 625
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
ESK L G WRLYDTYGFPVDLT+LM EE+GL +D +E AK+++
Sbjct: 409 ESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQES 455
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
L+ FVD ++ G + GI+LDK+ FYAEQGGQ YD G ++
Sbjct: 505 LKLHDGTNFVDEITEPGKKYGIILDKTCFYAEQGGQEYDTGKIV 548
>gi|238896148|ref|YP_002920884.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|365140022|ref|ZP_09346142.1| alanyl-tRNA synthetase [Klebsiella sp. 4_1_44FAA]
gi|386036156|ref|YP_005956069.1| alanyl-tRNA synthetase [Klebsiella pneumoniae KCTC 2242]
gi|402779351|ref|YP_006634897.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|424831999|ref|ZP_18256727.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|425075304|ref|ZP_18478407.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|425085940|ref|ZP_18489033.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|449059589|ref|ZP_21737281.1| alanyl-tRNA ligase [Klebsiella pneumoniae hvKP1]
gi|238548466|dbj|BAH64817.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|339763284|gb|AEJ99504.1| alanyl-tRNA synthetase [Klebsiella pneumoniae KCTC 2242]
gi|363653897|gb|EHL92841.1| alanyl-tRNA synthetase [Klebsiella sp. 4_1_44FAA]
gi|402540292|gb|AFQ64441.1| Alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|405595507|gb|EKB68897.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW1]
gi|405606449|gb|EKB79441.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW3]
gi|414709438|emb|CCN31142.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
Ecl8]
gi|448874714|gb|EMB09749.1| alanyl-tRNA ligase [Klebsiella pneumoniae hvKP1]
Length = 875
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDSVS+G EA ++LD++ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDSVSAGQEAVVILDQTPFYAESGGQVGDKG-------------------ELKGAGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLL-HTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + S +L+VGD ++ +D ARR+ I NH+ATH+++ AL
Sbjct: 519 ----FAVSDTQKYGQAIGHIGKVASGSLKVGDAVQADVDEARRQRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNA 448
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++ + EF G HL + V I + ++++ G V + G + D
Sbjct: 449 MIRVDGASEFKGYDHLELNGKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGD 508
Query: 121 E 121
+
Sbjct: 509 K 509
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VDSVS+G EA ++LD++ FYAE GGQ+ D+G + F +VS +
Sbjct: 468 GKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGDKGELKGAGFSFAVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VDSVS+G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDSVSAGQEAVVILDQTPFYAESGGQVGDKGELKGA 515
>gi|262043942|ref|ZP_06017027.1| alanine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|259038706|gb|EEW39892.1| alanine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 875
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDSVS+G EA ++LD++ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDSVSAGQEAVVILDQTPFYAESGGQVGDKG-------------------ELKGAGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLL-HTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + S +L+VGD ++ +D ARR+ I NH+ATH+++ AL
Sbjct: 519 ----FAVSDTQKYGQAIGHIGKVASGSLKVGDAVQADVDEARRQRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNA 448
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++ + EF G HL + V I + ++++ G V + G + D
Sbjct: 449 MIRVDGASEFKGYDHLELNGKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGD 508
Query: 121 E 121
+
Sbjct: 509 K 509
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VDSVS+G EA ++LD++ FYAE GGQ+ D+G + F +VS +
Sbjct: 468 GKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGDKGELKGAGFSFAVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VDSVS+G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDSVSAGQEAVVILDQTPFYAESGGQVGDKGELKGA 515
>gi|417119196|ref|ZP_11969561.1| alanine--tRNA ligase [Escherichia coli 1.2741]
gi|386137549|gb|EIG78711.1| alanine--tRNA ligase [Escherichia coli 1.2741]
Length = 833
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + GVN
Sbjct: 437 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGVN----------------------- 473
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 474 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 531
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 532 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 565
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 337 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 395
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 396 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 455
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 456 YAESGGQVGDK 466
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 30/37 (81%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + GVN
Sbjct: 437 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGVN 473
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 425 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGVNF 474
>gi|126632676|emb|CAM56636.1| novel protein similar to vertebrate aminolevulinate delta-synthase
1 (ALAS1) [Danio rerio]
Length = 917
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 66/133 (49%), Gaps = 22/133 (16%)
Query: 325 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYAL 384
V V G ++LD+++FYAEQGGQ D+G+ D Q L+ V L G
Sbjct: 506 LVSEVRQGQHCAVILDQTSFYAEQGGQANDQGYF--TKDGLQDVLFPVKCVRLAGGYVVH 563
Query: 385 PIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
+ T + TLR GD++ LH+D A R M NHTATH+LN AL
Sbjct: 564 KV--------------------TAAETLRTGDQVHLHVDEAWRLGCMINHTATHVLNFAL 603
Query: 445 RFVLGPEADQKGS 457
R +LGP Q+GS
Sbjct: 604 RELLGPVVSQRGS 616
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 4/61 (6%)
Query: 3 QTIAKLGE-SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD---MEVYEDAKKKAQS 58
+T++ + E S P VAW LY GFP+DL LM+EEKG VD M+V ED +K++
Sbjct: 388 RTLSNMDENSSFFPASVAWSLYRNLGFPLDLIDLMLEEKGKIVDKKEMKVLEDEYEKSEE 447
Query: 59 E 59
+
Sbjct: 448 D 448
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVD 327
+ +V+ L + V V G ++LD+++FYAEQGGQ D+G+ + D
Sbjct: 494 KASVLALYCDGALVSEVRQGQHCAVILDQTSFYAEQGGQANDQGYFTKDGLQD 546
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 236 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGF 268
V V G ++LD+++FYAEQGGQ D+G+
Sbjct: 506 LVSEVRQGQHCAVILDQTSFYAEQGGQANDQGY 538
>gi|452979442|gb|EME79204.1| hypothetical protein MYCFIDRAFT_57749 [Pseudocercospora fijiensis
CIRAD86]
Length = 958
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 74/136 (54%), Gaps = 23/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q + V G + G+ LD++NFYAEQGGQ D G ++ ++ E++I++ V L G
Sbjct: 517 QSTEEVPKGEQFGVFLDRTNFYAEQGGQENDTGRIL-IDGEAEIDV---HNVQLYGGYVM 572
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
++ + TL+VGD++ D RR+PI +NHT THILN A
Sbjct: 573 HTGYMNYG-------------------TLKVGDQVLSEYDELRRQPIRNNHTGTHILNFA 613
Query: 444 LRFVLGPEADQKGSLV 459
LR LG + +QKGSLV
Sbjct: 614 LRETLGDDVNQKGSLV 629
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/63 (55%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ--SEPESQA 64
K SKVL GD WRLYDTYGFPVDLT+LM EE+GL + E A++KA+ S+ E +A
Sbjct: 408 KANNSKVLEGDDVWRLYDTYGFPVDLTRLMAEERGLDIIDEDVAKAQEKAREASKGEKKA 467
Query: 65 GME 67
G +
Sbjct: 468 GTD 470
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 38/68 (55%), Gaps = 10/68 (14%)
Query: 213 LGDLSQTKHTPFVKRLRFS-------YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQ 262
+ D+ +T +P +R + + ++F+ S V G + G+ LD++NFYAEQGGQ
Sbjct: 485 MADVPKTDDSPKFQRDNITATIKAIYHGRKFLQSTEEVPKGEQFGVFLDRTNFYAEQGGQ 544
Query: 263 IYDEGFMI 270
D G ++
Sbjct: 545 ENDTGRIL 552
>gi|422800604|ref|ZP_16849101.1| alanyl-tRNA synthetase [Escherichia coli M863]
gi|323966841|gb|EGB62270.1| alanyl-tRNA synthetase [Escherichia coli M863]
Length = 876
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + GVN
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGVN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 30/37 (81%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + GVN
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGVN 516
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGVNF 517
>gi|422780386|ref|ZP_16833171.1| alanyl-tRNA synthetase [Escherichia coli TW10509]
gi|323978695|gb|EGB73777.1| alanyl-tRNA synthetase [Escherichia coli TW10509]
Length = 876
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 83/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + GVN
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGVN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 30/37 (81%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + GVN
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGVN 516
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGVNF 517
>gi|386016887|ref|YP_005935183.1| alanyl-tRNA synthetase AlaS [Pantoea ananatis AJ13355]
gi|327394965|dbj|BAK12387.1| alanyl-tRNA synthetase AlaS [Pantoea ananatis AJ13355]
Length = 875
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 79/145 (54%), Gaps = 26/145 (17%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N + VD++S+G +A I+LD++ FY E GGQ+ D G + G N
Sbjct: 476 NGEAVDALSAGQDAVIVLDETPFYGESGGQVGDTGELKGNN------------------- 516
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
AL FS+ + +K + + + LS LRVGD+L+ +D ARR I NH+ATH+L
Sbjct: 517 -AL-----FSVQDTQKYGQAIGHIGKLSSGQLRVGDRLEAVVDEARRARIRLNHSATHLL 570
Query: 441 NHALRFVLGPEADQKGSLVYRYHLH 465
+ ALR VLG QKGSLV +L
Sbjct: 571 HAALRQVLGEHVAQKGSLVNDKYLR 595
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 70/162 (43%), Gaps = 15/162 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL +S L G+ +RLYDT+GFP DLT + E+ L +D +E A ++ +
Sbjct: 380 EELAKL-QSDTLDGETVFRLYDTFGFPADLTADVCRERNLKIDEAGFEKAMEQQRQRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++ + F G L + V ++ E +A++ G + V
Sbjct: 439 ASGFGADYSNVIRIDAASSFKGYEQLDLTATVKALFVNGEAVDALSAGQDAVIVLDETPF 498
Query: 111 FQSHSGSINDEMVNKYPSLYRLFRTVHKQKYVQDALNVSCLS 152
+ G + D + LF QKY Q ++ LS
Sbjct: 499 YGESGGQVGD--TGELKGNNALFSVQDTQKYGQAIGHIGKLS 538
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 7/59 (11%)
Query: 215 DLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
DL+ T FV N + VD++S+G +A I+LD++ FY E GGQ+ D G + G N
Sbjct: 465 DLTATVKALFV-------NGEAVDALSAGQDAVIVLDETPFYGESGGQVGDTGELKGNN 516
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
TV L N + VD++S+G +A I+LD++ FY E GGQ+ D G + + SV +
Sbjct: 468 ATVKALFVNGEAVDALSAGQDAVIVLDETPFYGESGGQVGDTGELKGNNALFSVQDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
>gi|218184221|gb|EEC66648.1| hypothetical protein OsI_32912 [Oryza sativa Indica Group]
Length = 953
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 82/169 (48%), Gaps = 32/169 (18%)
Query: 302 DKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 361
D S Y + + + ++V + S + G++L+ ++FYAEQGGQIYD G
Sbjct: 488 DDSPKYGYKDNDSVVKAIYTGSEYVSAASGDEDFGLVLESTSFYAEQGGQIYDTG----- 542
Query: 362 NDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHT-----LRVGD 416
+EGS F F+++N++ V LH S T L VGD
Sbjct: 543 --------------KIEGS------FGSFNVTNVQVFAGYV--LHMGSFTKGSKALSVGD 580
Query: 417 KLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
K+ +D ARR I NHT TH+LN ALR +LG DQKGS+V L
Sbjct: 581 KVACKVDYARRALIAPNHTCTHMLNFALREILGDHVDQKGSIVLPEKLR 629
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%), Gaps = 4/50 (8%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQS 58
VL G A+ L+DTYG+PVDLT++M + GLSVD E + E+A++KA++
Sbjct: 410 VLSGQDAFVLWDTYGYPVDLTEVMGVDYGLSVDREGFDAAMEEARQKARN 459
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 245 EAGILLDKSNFYAE---QGGQIYDEGFMIGVNDEGTVVGLRYN-KQFVDSVSSGTEAGIL 300
E I+LD +N A+ QG D+ G D +VV Y ++V + S + G++
Sbjct: 466 ENSIVLD-ANATAQLRNQGLASTDDSPKYGYKDNDSVVKAIYTGSEYVSAASGDEDFGLV 524
Query: 301 LDKSNFYAEQGGQIYDEG 318
L+ ++FYAEQGGQIYD G
Sbjct: 525 LESTSFYAEQGGQIYDTG 542
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSK 108
+ PES+ + S E CGGTH+ F + SEE IAKG ++ +K
Sbjct: 702 ANPESKEWLSISTELCGGTHIKNTSEAEAFALLSEEGIAKGVRRITAVTAK 752
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
++V + S + G++L+ ++FYAEQGGQIYD G + G
Sbjct: 510 EYVSAASGDEDFGLVLESTSFYAEQGGQIYDTGKIEG 546
>gi|115481322|ref|NP_001064254.1| Os10g0182000 [Oryza sativa Japonica Group]
gi|110288715|gb|ABG65948.1| Alanyl-tRNA synthetase, mitochondrial precursor, putative,
expressed [Oryza sativa Japonica Group]
gi|113638863|dbj|BAF26168.1| Os10g0182000 [Oryza sativa Japonica Group]
gi|215694746|dbj|BAG89937.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 999
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/169 (34%), Positives = 82/169 (48%), Gaps = 32/169 (18%)
Query: 302 DKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 361
D S Y + + + ++V + S + G++L+ ++FYAEQGGQIYD G
Sbjct: 534 DDSPKYGYKDNDSVVKAIYTGSEYVSAASGDEDFGLVLESTSFYAEQGGQIYDTG----- 588
Query: 362 NDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHT-----LRVGD 416
+EGS F F+++N++ V LH S T L VGD
Sbjct: 589 --------------KIEGS------FGSFNVTNVQVFAGYV--LHMGSFTKGSKALSVGD 626
Query: 417 KLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
K+ +D ARR I NHT TH+LN ALR +LG DQKGS+V L
Sbjct: 627 KVACKVDYARRALIAPNHTCTHMLNFALREILGDHVDQKGSIVLPEKLR 675
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%), Gaps = 4/50 (8%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQS 58
VL G A+ L+DTYG+PVDLT++M + GLSVD E + E+A++KA++
Sbjct: 456 VLSGQDAFVLWDTYGYPVDLTEVMGVDYGLSVDREGFDAAMEEARQKARN 505
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 245 EAGILLDKSNFYAE---QGGQIYDEGFMIGVNDEGTVVGLRYN-KQFVDSVSSGTEAGIL 300
E I+LD +N A+ QG D+ G D +VV Y ++V + S + G++
Sbjct: 512 ENSIVLD-ANATAQLRNQGLASTDDSPKYGYKDNDSVVKAIYTGSEYVSAASGDEDFGLV 570
Query: 301 LDKSNFYAEQGGQIYDEG 318
L+ ++FYAEQGGQIYD G
Sbjct: 571 LESTSFYAEQGGQIYDTG 588
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSK 108
+ PES+ + S E CGGTH+ F + SEE IAKG ++ +K
Sbjct: 748 ANPESKEWLSISTELCGGTHIKNTSEAEAFALLSEEGIAKGVRRITAVTAK 798
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
++V + S + G++L+ ++FYAEQGGQIYD G + G
Sbjct: 556 EYVSAASGDEDFGLVLESTSFYAEQGGQIYDTGKIEG 592
>gi|50545890|ref|XP_500483.1| YALI0B04180p [Yarrowia lipolytica]
gi|49646349|emb|CAG82710.1| YALI0B04180p [Yarrowia lipolytica CLIB122]
Length = 960
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 78/145 (53%), Gaps = 30/145 (20%)
Query: 325 FVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
FVDSV S + G+LLDK+ YAE GGQ YD G ++ ++G
Sbjct: 517 FVDSVDESAGQVGLLLDKTCMYAESGGQEYDTGKIV-----------------IDGQ--- 556
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSH---TLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
+F ++N++ V LHT + +L++GD + + DTARR P+ +NHT TH+L
Sbjct: 557 ----TEFDVNNVQVYAGYV--LHTGNFNYGSLKIGDVVNVGFDTARRTPLKNNHTGTHVL 610
Query: 441 NHALRFVLGPEADQKGSLVYRYHLH 465
N+AL+ LG DQKGSLV L
Sbjct: 611 NYALKETLGDTIDQKGSLVASEKLR 635
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 44/73 (60%), Gaps = 6/73 (8%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
AK VL G WRLYDTYGFPVDLT++M EE GL +D ++ AK+ +S S+ G
Sbjct: 406 AKANSKTVLAGKDVWRLYDTYGFPVDLTRIMAEEAGLDIDEAAFDKAKQ--ESLEASKGG 463
Query: 66 METSVEFCGGTHL 78
+T+ GG L
Sbjct: 464 KKTA----GGVQL 472
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 275 EGTVVGLRYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEG 318
+ VV + FVDSV S + G+LLDK+ YAE GGQ YD G
Sbjct: 505 DAKVVAIYNGTGFVDSVDESAGQVGLLLDKTCMYAESGGQEYDTG 549
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
+ P+ E SVEFCGGTH+ + I E IAKG IV+ G +
Sbjct: 708 ANPDDAKWAEYSVEFCGGTHVGKTGEIKHLVIIEESGIAKGIRRIVAVTGKEAADVQKLA 767
Query: 117 SINDEMVNK 125
+ DE ++K
Sbjct: 768 AEFDERLDK 776
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 236 FVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
FVDSV S + G+LLDK+ YAE GGQ YD G ++
Sbjct: 517 FVDSVDESAGQVGLLLDKTCMYAESGGQEYDTGKIV 552
>gi|397659529|ref|YP_006500231.1| alanyl-tRNA synthetase [Klebsiella oxytoca E718]
gi|394347688|gb|AFN33809.1| Alanyl-tRNA synthetase [Klebsiella oxytoca E718]
Length = 875
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD+V++G EA ++LD++ FYAE GGQ+ D+G L+GS ++
Sbjct: 480 VDAVNAGQEAVVILDQTPFYAESGGQVGDKG-------------------ELKGSGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F +S+ +K + + + L S +L+VGD ++ +D ARR+ I NH+ATH+++ AL
Sbjct: 519 ----FQVSDAQKYGQAIGHIGKLTSGSLKVGDAVQADVDQARRQRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG 65
+G
Sbjct: 439 SSG 441
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VD+V++G EA ++LD++ FYAE GGQ+ D+G + F VS +
Sbjct: 468 GKVTALFIDGKAVDAVNAGQEAVVILDQTPFYAESGGQVGDKGELKGSGFSFQVSDAQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VD+V++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDAVNAGQEAVVILDQTPFYAESGGQVGDKGELKG 514
>gi|168700524|ref|ZP_02732801.1| alanyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
Length = 425
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 75/135 (55%), Gaps = 27/135 (20%)
Query: 328 SVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIF 387
++ +G A +LLD++NFYAEQGGQ+ D G ++ G+ A
Sbjct: 14 ALKAGDSAALLLDRTNFYAEQGGQVGDTG-----------------TIDRPGTAGA---- 52
Query: 388 LQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
+F + + ++ + V LH L+ L+VGD++ L T RR +M NHTATH+LN AL
Sbjct: 53 -EFEVEDTQRLGETV--LHVGALLAGELKVGDRVTLQQTTTRRIDVMRNHTATHLLNLAL 109
Query: 445 RFVLGPEADQKGSLV 459
R VLG +QKGSLV
Sbjct: 110 REVLGHHVEQKGSLV 124
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 26/138 (18%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTF---QSH 114
+E + + SVEFCGGTHL +G F I S+E +AKG ++ K + Q+
Sbjct: 196 AEAPEKVTQDMSVEFCGGTHLPRTGTIGYFKIVSQEGVAKGIRRITAVTGKPAYEDVQTR 255
Query: 115 SGSIN----------DEMVNKYPSLYRLFRTVHKQ--KYVQDALNVSCLSFRGVWEHGMS 162
S ++ DE+ + +L + Q K V AL GV + ++
Sbjct: 256 SAIVDELAGTFQCRPDELPTRVGALQEQLKAAQAQLKKAVAAALT-------GVVDELIA 308
Query: 163 ----VGWTGVAIGALPFG 176
VG + V + LP G
Sbjct: 309 SAPDVGGSKVVVAKLPDG 326
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 290 SVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
++ +G A +LLD++NFYAEQGGQ+ D G +
Sbjct: 14 ALKAGDSAALLLDRTNFYAEQGGQVGDTGTIDR 46
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 24/31 (77%)
Query: 239 SVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
++ +G A +LLD++NFYAEQGGQ+ D G +
Sbjct: 14 ALKAGDSAALLLDRTNFYAEQGGQVGDTGTI 44
>gi|328353302|emb|CCA39700.1| alanyl-tRNA synthetase [Komagataella pastoris CBS 7435]
Length = 959
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 72/139 (51%), Gaps = 29/139 (20%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q V+ + GILLDK+ FYAEQGGQIYD G ++ ++G
Sbjct: 516 QSTSEVADDQQLGILLDKTPFYAEQGGQIYDTGKIV-----------------IDG---- 554
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
+F++ N++ V LHT L V DK+ D RR PI +NHT THIL
Sbjct: 555 ---VAEFNVENVQSYAGYV--LHTGYVEEGVLSVSDKIIAGYDELRRWPIKNNHTGTHIL 609
Query: 441 NHALRFVLGPEADQKGSLV 459
N ALR VLG + +QKGSLV
Sbjct: 610 NFALRDVLGDDVEQKGSLV 628
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
IA + L G WRLYDTYGFPVDLT+LM EE GL +D E +E AK+ ++
Sbjct: 404 IASKTPEQTLAGRDVWRLYDTYGFPVDLTRLMAEETGLKIDDEGFEIAKEASR 456
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 265 DEGFMIGV-NDEGTVVGLRYNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
D+ + G N E ++V + K+ + S V+ + GILLDK+ FYAEQGGQIYD G
Sbjct: 491 DDSYKYGTKNIEASIVAIYNGKELIQSTSEVADDQQLGILLDKTPFYAEQGGQIYDTG 548
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
Q V+ + GILLDK+ FYAEQGGQIYD G ++
Sbjct: 516 QSTSEVADDQQLGILLDKTPFYAEQGGQIYDTGKIV 551
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 60 PESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG-TFQSHSGS 117
P + S+EFCGGTH+A + DF I E IAKG IV+ ++ T Q +
Sbjct: 709 PSNAEWHNASIEFCGGTHVAKTGDIKDFVIIEESGIAKGIRRIVAVTSTEAHTVQRIARE 768
Query: 118 INDEM 122
ND++
Sbjct: 769 KNDQL 773
>gi|323335374|gb|EGA76661.1| Ala1p [Saccharomyces cerevisiae Vin13]
gi|323346372|gb|EGA80661.1| Ala1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365762987|gb|EHN04519.1| Ala1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 958
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/137 (40%), Positives = 73/137 (53%), Gaps = 24/137 (17%)
Query: 324 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
FVD ++ G GI+LDK+ FYAEQGGQ YD G ++ ++D ++ + L N
Sbjct: 512 NFVDEITEPGKXYGIILDKTCFYAEQGGQEYDTGKIV-IDDAAEFNVENVQLYN------ 564
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +L++ K L VGDK+ D RR PI +NHT THILN
Sbjct: 565 ----GFVFHTGSLEEGK------------LSVGDKIIASFDELRRFPIKNNHTGTHILNF 608
Query: 443 ALRFVLGPEADQKGSLV 459
AL+ LG + DQKGSLV
Sbjct: 609 ALKETLGNDVDQKGSLV 625
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
ESK L G WRLYDTYGFPVDLT+LM EE+GL +D +E AK+++
Sbjct: 409 ESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQES 455
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
L+ FVD ++ G GI+LDK+ FYAEQGGQ YD G ++
Sbjct: 505 LKLHDGTNFVDEITEPGKXYGIILDKTCFYAEQGGQEYDTGKIV 548
>gi|420321636|ref|ZP_14823461.1| alanyl-tRNA synthetase [Shigella flexneri 2850-71]
gi|391246943|gb|EIQ06199.1| alanyl-tRNA synthetase [Shigella flexneri 2850-71]
Length = 784
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ ID ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADIDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
R VLG QKGSLV L H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKMLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|386078229|ref|YP_005991754.1| alanyl-tRNA synthetase AlaS [Pantoea ananatis PA13]
gi|354987410|gb|AER31534.1| alanyl-tRNA synthetase AlaS [Pantoea ananatis PA13]
Length = 875
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 56/145 (38%), Positives = 79/145 (54%), Gaps = 26/145 (17%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N + VD++S+G +A I+LD++ FY E GGQ+ D G + G N
Sbjct: 476 NGEAVDALSAGQDAVIVLDETPFYGESGGQVGDTGELKGNN------------------- 516
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
AL FS+ + +K + + + LS LRVGD+L+ +D ARR I NH+ATH+L
Sbjct: 517 -AL-----FSVQDTQKYGQAIGHIGKLSSGQLRVGDRLEAVVDEARRARIRLNHSATHLL 570
Query: 441 NHALRFVLGPEADQKGSLVYRYHLH 465
+ ALR VLG QKGSLV +L
Sbjct: 571 HAALRQVLGEHVAQKGSLVNDKYLR 595
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 15/162 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ +RLYDT+GFP DLT + E+ L +D +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETVFRLYDTFGFPADLTADVCRERNLKIDEAGFEKAMEQQRQRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++ + F G L + V ++ E +A++ G + V
Sbjct: 439 ASGFGADYSNVIRIDAASSFKGYEQLDLTATVKALFVNGEAVDALSAGQDAVIVLDETPF 498
Query: 111 FQSHSGSINDEMVNKYPSLYRLFRTVHKQKYVQDALNVSCLS 152
+ G + D + LF QKY Q ++ LS
Sbjct: 499 YGESGGQVGD--TGELKGNNALFSVQDTQKYGQAIGHIGKLS 538
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 7/59 (11%)
Query: 215 DLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
DL+ T FV N + VD++S+G +A I+LD++ FY E GGQ+ D G + G N
Sbjct: 465 DLTATVKALFV-------NGEAVDALSAGQDAVIVLDETPFYGESGGQVGDTGELKGNN 516
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
TV L N + VD++S+G +A I+LD++ FY E GGQ+ D G + + SV +
Sbjct: 468 ATVKALFVNGEAVDALSAGQDAVIVLDETPFYGESGGQVGDTGELKGNNALFSVQDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
>gi|336371860|gb|EGO00200.1| hypothetical protein SERLA73DRAFT_107224 [Serpula lacrymans var.
lacrymans S7.3]
gi|336384611|gb|EGO25759.1| hypothetical protein SERLADRAFT_361256 [Serpula lacrymans var.
lacrymans S7.9]
Length = 956
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 77/149 (51%), Gaps = 32/149 (21%)
Query: 317 EGFMSNKQFVDSVSS---GTEAGILLDKSNFYAEQGGQIYDEGFMI--GVNDESQIELWF 371
+G NK F +S SS T G+LLD+++FYAE GGQ YD G ++ GV+D
Sbjct: 506 KGIYYNKNFFESTSSIPEDTTFGVLLDRTSFYAESGGQEYDTGNIVIDGVSD-------- 557
Query: 372 SSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPI 430
F ++N++ V + L + L +GD++ D RR P+
Sbjct: 558 ------------------FEVTNVQSFNGYVLHIGHLKYGKLDIGDEVVSSYDELRRWPL 599
Query: 431 MSNHTATHILNHALRFVLGPEADQKGSLV 459
SNHTATHILN LR VLG DQKGSLV
Sbjct: 600 RSNHTATHILNFGLREVLGDHIDQKGSLV 628
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
A+ +K L G WRLYDTYGFPVDLT+LM EE L ++ + +E+A++ ++
Sbjct: 405 AQQQSTKELNGKDVWRLYDTYGFPVDLTRLMAEELHLGINDKEFEEAQEASK 456
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 268 FMIGVNDEGTVVGLRYNKQFVDSVSS---GTEAGILLDKSNFYAEQGGQIYDEG 318
F +G N V G+ YNK F +S SS T G+LLD+++FYAE GGQ YD G
Sbjct: 496 FQLG-NIMAQVKGIYYNKNFFESTSSIPEDTTFGVLLDRTSFYAESGGQEYDTG 548
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 5/48 (10%)
Query: 232 YNKQFVDSVSS---GTEAGILLDKSNFYAEQGGQIYDEGFMI--GVND 274
YNK F +S SS T G+LLD+++FYAE GGQ YD G ++ GV+D
Sbjct: 510 YNKNFFESTSSIPEDTTFGVLLDRTSFYAESGGQEYDTGNIVIDGVSD 557
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 24/38 (63%)
Query: 61 ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG 98
E+ TSVEFCGGTH+A + DF I+ E IAKG
Sbjct: 710 ENPKWRNTSVEFCGGTHVAKTGDIKDFVITEESGIAKG 747
>gi|425092932|ref|ZP_18496016.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
gi|405611274|gb|EKB84042.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
WGLW5]
Length = 875
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDSVS+G EA ++LD++ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDSVSAGQEAVVILDQTPFYAESGGQVGDKG-------------------ELKGAGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLL-HTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + S TL+VG+ ++ +D ARR+ I NH+ATH+++ AL
Sbjct: 519 ----FAVSDTQKYGQAIGHIGKVASGTLKVGEAVQADVDEARRQRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNA 448
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++ + EF G HL + V I + ++++ G V + G + D
Sbjct: 449 MIRVDGASEFKGYDHLELNGKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGD 508
Query: 121 E 121
+
Sbjct: 509 K 509
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VDSVS+G EA ++LD++ FYAE GGQ+ D+G + F +VS +
Sbjct: 468 GKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGDKGELKGAGFSFAVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VDSVS+G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDSVSAGQEAVVILDQTPFYAESGGQVGDKGELKGA 515
>gi|326678670|ref|XP_001332388.4| PREDICTED: alanyl-tRNA synthetase, mitochondrial [Danio rerio]
Length = 1001
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 66/133 (49%), Gaps = 22/133 (16%)
Query: 325 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYAL 384
V V G ++LD+++FYAEQGGQ D+G+ D Q L+ V L G
Sbjct: 552 LVSEVRQGQHCAVILDQTSFYAEQGGQANDQGYF--TKDGLQDVLFPVKCVRLAGGYVVH 609
Query: 385 PIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
+ T + TLR GD++ LH+D A R M NHTATH+LN AL
Sbjct: 610 KV--------------------TAAETLRTGDQVHLHVDEAWRLGCMINHTATHVLNFAL 649
Query: 445 RFVLGPEADQKGS 457
R +LGP Q+GS
Sbjct: 650 RELLGPIVSQRGS 662
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 3 QTIAKLGE-SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD---MEVYEDAKKKAQS 58
+T++ + E S P VAW LY GFP+DL LM+EEKG VD M+V ED +K
Sbjct: 430 RTLSNMDENSSFFPASVAWSLYRNLGFPLDLIDLMLEEKGKIVDKKEMKVLEDEYEKLGL 489
Query: 59 EPESQAG 65
+ E G
Sbjct: 490 QSEEDEG 496
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVD 327
+ +V+ L + V V G ++LD+++FYAEQGGQ D+G+ + D
Sbjct: 540 KASVLALYCDGALVSEVRQGQHCAVILDQTSFYAEQGGQANDQGYFTKDGLQD 592
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%)
Query: 236 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGF 268
V V G ++LD+++FYAEQGGQ D+G+
Sbjct: 552 LVSEVRQGQHCAVILDQTSFYAEQGGQANDQGY 584
>gi|282890190|ref|ZP_06298720.1| hypothetical protein pah_c014o045 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338174288|ref|YP_004651098.1| alanyl-tRNA synthetase [Parachlamydia acanthamoebae UV-7]
gi|281499847|gb|EFB42136.1| hypothetical protein pah_c014o045 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336478646|emb|CCB85244.1| alanyl-tRNA synthetase [Parachlamydia acanthamoebae UV-7]
Length = 876
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 82/144 (56%), Gaps = 26/144 (18%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G + ++QFV+ + +G +A I+LD++ FYAE GGQI D G ++VN
Sbjct: 472 GLVVDQQFVNQIIAGQDAMIILDQTPFYAEMGGQIGDTG----------------TIVNH 515
Query: 378 EGSKYALPIFLQFSLSN-LKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHT 435
+G + F ++N + + ++ + TL+H L+VGD ++ +D RR+ I +NHT
Sbjct: 516 QG--------MSFQVTNTISPYQGVIAHVGTLTHGHLKVGDSVEASVDAPRRQKIENNHT 567
Query: 436 ATHILNHALRFVLGPEADQKGSLV 459
ATH+L+ AL VLG Q GS+V
Sbjct: 568 ATHLLHWALHHVLGEHVKQAGSVV 591
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQ 324
TV GL ++QFV+ + +G +A I+LD++ FYAE GGQI D G + N Q
Sbjct: 468 ATVTGLVVDQQFVNQIIAGQDAMIILDQTPFYAEMGGQIGDTGTIVNHQ 516
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEG 276
++QFV+ + +G +A I+LD++ FYAE GGQI D G + VN +G
Sbjct: 476 DQQFVNQIIAGQDAMIILDQTPFYAEMGGQIGDTGTI--VNHQG 517
>gi|254571161|ref|XP_002492690.1| Cytoplasmic alanyl-tRNA synthetase [Komagataella pastoris GS115]
gi|238032488|emb|CAY70511.1| Cytoplasmic alanyl-tRNA synthetase [Komagataella pastoris GS115]
Length = 981
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 72/139 (51%), Gaps = 29/139 (20%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q V+ + GILLDK+ FYAEQGGQIYD G ++ ++G
Sbjct: 538 QSTSEVADDQQLGILLDKTPFYAEQGGQIYDTGKIV-----------------IDG---- 576
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
+F++ N++ V LHT L V DK+ D RR PI +NHT THIL
Sbjct: 577 ---VAEFNVENVQSYAGYV--LHTGYVEEGVLSVSDKIIAGYDELRRWPIKNNHTGTHIL 631
Query: 441 NHALRFVLGPEADQKGSLV 459
N ALR VLG + +QKGSLV
Sbjct: 632 NFALRDVLGDDVEQKGSLV 650
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/53 (54%), Positives = 36/53 (67%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
IA + L G WRLYDTYGFPVDLT+LM EE GL +D E +E AK+ ++
Sbjct: 426 IASKTPEQTLAGRDVWRLYDTYGFPVDLTRLMAEETGLKIDDEGFEIAKEASR 478
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 4/58 (6%)
Query: 265 DEGFMIGV-NDEGTVVGLRYNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
D+ + G N E ++V + K+ + S V+ + GILLDK+ FYAEQGGQIYD G
Sbjct: 513 DDSYKYGTKNIEASIVAIYNGKELIQSTSEVADDQQLGILLDKTPFYAEQGGQIYDTG 570
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
Q V+ + GILLDK+ FYAEQGGQIYD G ++
Sbjct: 538 QSTSEVADDQQLGILLDKTPFYAEQGGQIYDTGKIV 573
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Query: 60 PESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG-TFQSHSGS 117
P + S+EFCGGTH+A + DF I E IAKG IV+ ++ T Q +
Sbjct: 731 PSNAEWHNASIEFCGGTHVAKTGDIKDFVIIEESGIAKGIRRIVAVTSTEAHTVQRIARE 790
Query: 118 INDEM 122
ND++
Sbjct: 791 KNDQL 795
>gi|417829105|ref|ZP_12475653.1| alanyl-tRNA synthetase [Shigella flexneri J1713]
gi|335574404|gb|EGM60730.1| alanyl-tRNA synthetase [Shigella flexneri J1713]
Length = 808
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 81/154 (52%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 412 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 448
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ ID ARR I NH+ATH+++ AL
Sbjct: 449 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADIDEARRARIRLNHSATHLMHAAL 506
Query: 445 RFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
R VLG QKGSLV L H M+ EE
Sbjct: 507 RQVLGTHVSQKGSLVNDKMLRFDFSHNEAMKPEE 540
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 312 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 370
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 371 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 430
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 431 YAESGGQVGDK 441
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 400 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 449
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 412 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 448
>gi|152971551|ref|YP_001336660.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|205830073|sp|A6TCV9.1|SYA_KLEP7 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|150956400|gb|ABR78430.1| alanyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
Length = 875
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDSVS+G EA ++LD++ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDSVSAGQEAVVILDQTPFYAESGGQVGDKG-------------------ELKGAGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + + S +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVSDTQKYGQAIGHIGKVASGSLKVGDAVQADVDEARRHRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNA 448
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++ + EF G HL + V I + ++++ G V + G + D
Sbjct: 449 MIRVDGASEFKGYDHLELNGKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGD 508
Query: 121 E 121
+
Sbjct: 509 K 509
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VDSVS+G EA ++LD++ FYAE GGQ+ D+G + F +VS +
Sbjct: 468 GKVTALFIDGKAVDSVSAGQEAVVILDQTPFYAESGGQVGDKGELKGAGFSFAVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VDSVS+G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDSVSAGQEAVVILDQTPFYAESGGQVGDKGELKGA 515
>gi|365848108|ref|ZP_09388588.1| alanine--tRNA ligase [Yokenella regensburgei ATCC 43003]
gi|364571502|gb|EHM49089.1| alanine--tRNA ligase [Yokenella regensburgei ATCC 43003]
Length = 875
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDSV++G EA ++LD++ FYAE GGQ+ D+G L+G+ +A
Sbjct: 480 VDSVNAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFA-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++++ +K + + L L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FTVTDTQKYGQAIGHLGKLATGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG 65
+G
Sbjct: 439 SSG 441
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VDSV++G EA ++LD++ FYAE GGQ+ D+G + F +V+ +
Sbjct: 468 GKVTALFIDGKAVDSVNAGQEAVVVLDQTPFYAESGGQVGDKGELKGAGFAFTVTDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VDSV++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDSVNAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|415857613|ref|ZP_11532313.1| alanyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|417729591|ref|ZP_12378285.1| alanyl-tRNA synthetase [Shigella flexneri K-671]
gi|417739562|ref|ZP_12388137.1| alanyl-tRNA synthetase [Shigella flexneri 4343-70]
gi|420343039|ref|ZP_14844507.1| alanyl-tRNA synthetase [Shigella flexneri K-404]
gi|420374765|ref|ZP_14874712.1| alanyl-tRNA synthetase [Shigella flexneri 1235-66]
gi|313648345|gb|EFS12789.1| alanyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|332753412|gb|EGJ83792.1| alanyl-tRNA synthetase [Shigella flexneri 4343-70]
gi|332753920|gb|EGJ84295.1| alanyl-tRNA synthetase [Shigella flexneri K-671]
gi|391264701|gb|EIQ23689.1| alanyl-tRNA synthetase [Shigella flexneri K-404]
gi|391315922|gb|EIQ73424.1| alanyl-tRNA synthetase [Shigella flexneri 1235-66]
Length = 784
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ ID ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADIDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|291618585|ref|YP_003521327.1| alanyl-tRNA synthetase [Pantoea ananatis LMG 20103]
gi|291153615|gb|ADD78199.1| AlaS [Pantoea ananatis LMG 20103]
Length = 875
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/150 (38%), Positives = 80/150 (53%), Gaps = 26/150 (17%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+G N + VD++S+G +A I+LD++ FY E GGQ+ D G + G N
Sbjct: 471 KGLFVNGEAVDALSAGQDAVIVLDETPFYGESGGQVGDTGELKGNN-------------- 516
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHT 435
AL FS+ + +K + + + LS LRVGD L+ +D ARR I NH+
Sbjct: 517 ------AL-----FSVQDTQKYGQAIGHIGKLSSGQLRVGDCLEAVVDEARRARIRLNHS 565
Query: 436 ATHILNHALRFVLGPEADQKGSLVYRYHLH 465
ATH+L+ ALR VLG QKGSLV +L
Sbjct: 566 ATHLLHAALRQVLGEHVAQKGSLVNDKYLR 595
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 69/162 (42%), Gaps = 15/162 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ +RLYDT+GFP DLT + E+ L +D +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETVFRLYDTFGFPADLTADVCRERNLKIDEAGFEKAMEQQRQRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++ + F G L + V ++ E +A++ G + V
Sbjct: 439 ASGFGADYSNVIRIDAASSFKGYEQLDLTATVKGLFVNGEAVDALSAGQDAVIVLDETPF 498
Query: 111 FQSHSGSINDEMVNKYPSLYRLFRTVHKQKYVQDALNVSCLS 152
+ G + D + LF QKY Q ++ LS
Sbjct: 499 YGESGGQVGD--TGELKGNNALFSVQDTQKYGQAIGHIGKLS 538
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
TV GL N + VD++S+G +A I+LD++ FY E GGQ+ D G + + SV +
Sbjct: 468 ATVKGLFVNGEAVDALSAGQDAVIVLDETPFYGESGGQVGDTGELKGNNALFSVQDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 7/59 (11%)
Query: 215 DLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
DL+ T FV N + VD++S+G +A I+LD++ FY E GGQ+ D G + G N
Sbjct: 465 DLTATVKGLFV-------NGEAVDALSAGQDAVIVLDETPFYGESGGQVGDTGELKGNN 516
>gi|190149963|ref|YP_001968488.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|307263291|ref|ZP_07544909.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
str. N273]
gi|205829969|sp|B3H177.1|SYA_ACTP7 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|189915094|gb|ACE61346.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|306871353|gb|EFN03079.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 13
str. N273]
Length = 874
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 81/153 (52%), Gaps = 31/153 (20%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G SN + VD++ SG A I+LD++ FYAE GGQ+ D G L++
Sbjct: 471 GLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSG-----------------LIST 513
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTA 436
E F++++ +K ++ + L S +L +GDK+ +D RR I +NH+A
Sbjct: 514 E--------ICNFAVNDTQKYGQVFGHIGQLTSGSLSIGDKVTATVDATRRVAITANHSA 565
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLHENIM 469
TH+L+ ALR VLG QKGSLV ENI+
Sbjct: 566 THLLHSALREVLGDHVAQKGSLV-----SENIL 593
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 253 SNFYAEQGGQIYDEGF--MIGVND---EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFY 307
SNF A+ I EG IG ++ + T+VGL N + VD++ SG A I+LD++ FY
Sbjct: 439 SNFGADYNNVIKVEGQTDFIGYDNLAAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFY 498
Query: 308 AEQGGQIYDEGFMSNK 323
AE GGQ+ D G +S +
Sbjct: 499 AEMGGQVGDSGLISTE 514
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
E+ L G+VA++LYDTYGFP+DLT + E+ +++D +E A+ AQ E
Sbjct: 385 ENNTLSGEVAFKLYDTYGFPLDLTADVCREREITIDEAGFE-AEMTAQRE 433
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N + VD++ SG A I+LD++ FYAE GGQ+ D G +
Sbjct: 475 NGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI 511
>gi|303249632|ref|ZP_07335837.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307252204|ref|ZP_07534102.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|302651444|gb|EFL81595.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306860348|gb|EFM92363.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
Length = 874
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 81/153 (52%), Gaps = 31/153 (20%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G SN + VD++ SG A I+LD++ FYAE GGQ+ D G L++
Sbjct: 471 GLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSG-----------------LIST 513
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTA 436
E F++++ +K ++ + L S +L +GDK+ +D RR I +NH+A
Sbjct: 514 E--------ICNFAVNDTQKYGQVFGHIGQLTSGSLSIGDKVTATVDATRRVAITANHSA 565
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLHENIM 469
TH+L+ ALR VLG QKGSLV ENI+
Sbjct: 566 THLLHSALREVLGDHVAQKGSLV-----SENIL 593
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 253 SNFYAEQGGQIYDEGF--MIGVND---EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFY 307
SNF A+ I EG IG ++ + T+VGL N + VD++ SG A I+LD++ FY
Sbjct: 439 SNFGADYNNVIKVEGQTDFIGYDNLAAQATIVGLFSNGKAVDTIQSGESAVIILDQTPFY 498
Query: 308 AEQGGQIYDEGFMSNK 323
AE GGQ+ D G +S +
Sbjct: 499 AEMGGQVGDSGLISTE 514
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
E+ L G+VA++LYDTYGFP+DLT + E+ +++D +E A+ AQ E
Sbjct: 385 ENNTLSGEVAFKLYDTYGFPLDLTADVCREREITIDEAGFE-AEMTAQRE 433
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N + VD++ SG A I+LD++ FYAE GGQ+ D G +
Sbjct: 475 NGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI 511
>gi|307261112|ref|ZP_07542790.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
str. 1096]
gi|306869194|gb|EFN00993.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 12
str. 1096]
Length = 874
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 81/153 (52%), Gaps = 31/153 (20%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G SN + VD++ SG A I+LD++ FYAE GGQ+ D G L++
Sbjct: 471 GLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSG-----------------LIST 513
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTA 436
E F++++ +K ++ + L S +L +GDK+ +D RR I +NH+A
Sbjct: 514 E--------ICNFAVNDTQKYGQVFGHIGQLTSGSLSIGDKVTATVDATRRVAITANHSA 565
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLHENIM 469
TH+L+ ALR VLG QKGSLV ENI+
Sbjct: 566 THLLHSALREVLGDHVAQKGSLV-----SENIL 593
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
+ T+VGL N + VD++ SG A I+LD++ FYAE GGQ+ D G +S +
Sbjct: 466 QATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLISTE 514
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
E+ L G+VA++LYDTYGFP+DLT + E+ L++D +E A+ AQ E
Sbjct: 385 ENNTLSGEVAFKLYDTYGFPLDLTADVCRERELTIDEAGFE-AEMTAQRE 433
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N + VD++ SG A I+LD++ FYAE GGQ+ D G +
Sbjct: 475 NGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI 511
>gi|296104368|ref|YP_003614514.1| alanyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295058827|gb|ADF63565.1| alanyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 875
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 80/135 (59%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDS+S+G +A ++LDK+ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDSISAGQDAVVILDKTPFYAESGGQVGDKG-------------------ELQGNGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
FS+++ +K + + L L S +L+VG+ ++ ++D ARR I NH+ATH+++ AL
Sbjct: 519 ----FSVNDTQKYGQAIGHLGKLVSGSLKVGEGVQANVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 REVLGTHVAQKGSLV 589
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-KGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G L + V + + ++I+ G + V
Sbjct: 439 SSGFGADYNAMIRVDSASEFKGYEALELTGKVTALFVDGKAVDSISAGQDAVVILDKTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 6/44 (13%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDE------GFMIGVND 274
VDS+S+G +A ++LDK+ FYAE GGQ+ D+ GF VND
Sbjct: 480 VDSISAGQDAVVILDKTPFYAESGGQVGDKGELQGNGFSFSVND 523
>gi|357140315|ref|XP_003571715.1| PREDICTED: LOW QUALITY PROTEIN: alanyl-tRNA synthetase-like
[Brachypodium distachyon]
Length = 993
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 77/149 (51%), Gaps = 34/149 (22%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+F+D+ S + G++L+ ++FYAEQGGQIYD G S+ L GS
Sbjct: 547 EFIDTASGAEDFGLVLESTSFYAEQGGQIYDTG----------------SIEGLSGS--- 587
Query: 384 LPIFLQFSLSNLKKKKKLVKLLH-------TLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
F++SN++ V LH + + L VGD+++ +D RR I NHT
Sbjct: 588 ------FTVSNVQVFAGYV--LHIGSFMEGSDTKALSVGDEVRCKVDYNRRTLIAPNHTC 639
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+LN ALR VLG DQKGS+V L
Sbjct: 640 THMLNFALREVLGDHIDQKGSIVLPEKLR 668
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%), Gaps = 4/50 (8%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQS 58
VL G A+ L+DTYG+P+DLT++M + GL+VDME + E+A++KA++
Sbjct: 447 VLSGQDAFILWDTYGYPIDLTEVMAVDYGLTVDMEGFTLSMEEARQKARN 496
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV 278
+F+D+ S + G++L+ ++FYAEQGGQIYD G + G++ TV
Sbjct: 547 EFIDTASGAEDFGLVLESTSFYAEQGGQIYDTGSIEGLSGSFTV 590
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 26/33 (78%)
Query: 286 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+F+D+ S + G++L+ ++FYAEQGGQIYD G
Sbjct: 547 EFIDTASGAEDFGLVLESTSFYAEQGGQIYDTG 579
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQS 113
+ PES+ + S E CGGTH++ F + EE IAKG ++ ++ F++
Sbjct: 741 ANPESKEWLSISTELCGGTHISNTRDAAAFALVXEEGIAKGVRRITAVTAECAFEA 796
>gi|224083946|ref|XP_002307181.1| predicted protein [Populus trichocarpa]
gi|222856630|gb|EEE94177.1| predicted protein [Populus trichocarpa]
Length = 973
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 75/142 (52%), Gaps = 22/142 (15%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+F++S ++ E GI+L+ ++FYAEQGGQI+D G + G Q+ N++
Sbjct: 561 EFLESAAAANEVGIVLESTSFYAEQGGQIFDTGVLEGPFGSFQV-------CNVQ----- 608
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
IF F + + L +S VG+K+ +D RR+ I NHT TH+LN A
Sbjct: 609 --IFGGFIVH--------IGSLTGVSGRFSVGEKVTCKVDYDRRKLIAPNHTCTHMLNFA 658
Query: 444 LRFVLGPEADQKGSLVYRYHLH 465
LR VLG DQKGS+V L
Sbjct: 659 LREVLGNHVDQKGSIVLPEKLR 680
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 232 YN-KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
YN +F++S ++ E GI+L+ ++FYAEQGGQI+D G + G
Sbjct: 557 YNGSEFLESAAAANEVGIVLESTSFYAEQGGQIFDTGVLEG 597
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQS 113
+ PE++ + S E CGGTH+ F + SEE IAKG ++ + G F++
Sbjct: 753 ANPENEEWLSISAELCGGTHITNTREAKAFALLSEEGIAKGIRRITAVTTDGAFKA 808
>gi|444314227|ref|XP_004177771.1| hypothetical protein TBLA_0A04580 [Tetrapisispora blattae CBS 6284]
gi|387510810|emb|CCH58252.1| hypothetical protein TBLA_0A04580 [Tetrapisispora blattae CBS 6284]
Length = 954
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 73/140 (52%), Gaps = 30/140 (21%)
Query: 324 QFVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
+FV + G GI+LDK+ FYAEQGGQ YD G ++ ++GS
Sbjct: 512 EFVTEIKEIGKSYGIILDKTCFYAEQGGQEYDTGKLV-----------------IDGSS- 553
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHTATHI 439
+F++ N++ V HT +L VGDK+ D RR PI +NHT THI
Sbjct: 554 ------EFNVENVQLYNGFV--FHTGILADGSLSVGDKIIASFDELRRFPIKNNHTGTHI 605
Query: 440 LNHALRFVLGPEADQKGSLV 459
LN AL+ LG E DQKGSLV
Sbjct: 606 LNFALKETLGGEVDQKGSLV 625
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 35/46 (76%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+KVL G WRLYDTYGFPVDLT+LM EE GL +D +E AK+++
Sbjct: 410 TKVLDGKQVWRLYDTYGFPVDLTELMAEEHGLKIDGPGFEKAKQES 455
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+P ++ SVEFCGGTH+A + F I E IAKG IV+ G++
Sbjct: 705 DPTNEKWTNYSVEFCGGTHVAKTSDIKFFVIIEESGIAKGIRRIVAVTGTEA 756
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 235 QFVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+FV + G GI+LDK+ FYAEQGGQ YD G ++
Sbjct: 512 EFVTEIKEIGKSYGIILDKTCFYAEQGGQEYDTGKLV 548
>gi|225683316|gb|EEH21600.1| alanyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
Length = 962
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 76/141 (53%), Gaps = 26/141 (18%)
Query: 322 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
NK+FVDS + G + GI+LD++NFYAEQGGQ YD G +I ++ ++++ + V +
Sbjct: 513 NKKFVDSSKGIPEGEQFGIILDRTNFYAEQGGQEYDTGKII-IDGKAELAV---EDVQVY 568
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G F+++ + V D + D RR PI +NHT TH
Sbjct: 569 GGYVLHTGFMKYG-------------------SFNVNDSVIAEYDELRRWPIRNNHTGTH 609
Query: 439 ILNHALRFVLGPEADQKGSLV 459
ILN ALR VLG +QKGSLV
Sbjct: 610 ILNFALRKVLGDGVEQKGSLV 630
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFC 73
L G WRLYDT+GFPVDLTQLM EE+GL +D +E+A+ +A+ + Q + V
Sbjct: 416 LHGADVWRLYDTFGFPVDLTQLMAEERGLKIDNGEFEEARLRAKEASKGQGKLTKDVVKL 475
Query: 74 GGTHLAMAHHVGDFCISSEEAIAKGSNIVS 103
L + + D + + A NI S
Sbjct: 476 TVHDLGLLETMDDVPKTDDSAKFGRGNITS 505
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+NK+FVDS + G + GI+LD++NFYAEQGGQ YD G +I
Sbjct: 512 HNKKFVDSSKGIPEGEQFGIILDRTNFYAEQGGQEYDTGKII 553
>gi|303253696|ref|ZP_07339833.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307247624|ref|ZP_07529667.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|302647421|gb|EFL77640.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|306855894|gb|EFM88054.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
Length = 874
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 81/153 (52%), Gaps = 31/153 (20%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G SN + VD++ SG A I+LD++ FYAE GGQ+ D G L++
Sbjct: 471 GLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSG-----------------LIST 513
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTA 436
E F++++ +K ++ + L S +L +GDK+ +D RR I +NH+A
Sbjct: 514 E--------ICNFAVNDTQKYGQVFGHIGQLTSGSLSIGDKVTATVDATRRVAITANHSA 565
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLHENIM 469
TH+L+ ALR VLG QKGSLV ENI+
Sbjct: 566 THLLHSALREVLGDHVAQKGSLV-----SENIL 593
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
+ T+VGL N + VD++ SG A I+LD++ FYAE GGQ+ D G +S +
Sbjct: 466 QATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLISTE 514
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
E+ L G+VA++LYDTYGFP+DLT + E+ L++D +E A+ AQ E
Sbjct: 385 ENNTLSGEVAFKLYDTYGFPLDLTADVCRERELTIDEAGFE-AEMTAQRE 433
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N + VD++ SG A I+LD++ FYAE GGQ+ D G +
Sbjct: 475 NGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI 511
>gi|418257884|ref|ZP_12881361.1| alanyl-tRNA synthetase [Shigella flexneri 6603-63]
gi|397896203|gb|EJL12623.1| alanyl-tRNA synthetase [Shigella flexneri 6603-63]
Length = 839
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 443 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 479
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ ID ARR I NH+ATH+++ AL
Sbjct: 480 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADIDEARRARIRLNHSATHLMHAAL 537
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 538 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 571
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 343 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 401
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 402 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 461
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 462 YAESGGQVGDK 472
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 431 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 480
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 443 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 479
>gi|255713044|ref|XP_002552804.1| KLTH0D01848p [Lachancea thermotolerans]
gi|238934184|emb|CAR22366.1| KLTH0D01848p [Lachancea thermotolerans CBS 6340]
Length = 955
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/139 (39%), Positives = 73/139 (52%), Gaps = 26/139 (18%)
Query: 323 KQFVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
+ FVD +S G + G++LD + FYAEQGGQ YD G ++ ++D
Sbjct: 511 ENFVDEISEVGKQYGVILDSTCFYAEQGGQEYDMGTLV-IDD------------------ 551
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
+FS+ N++ V L L VGDK+ D RR PI +NHT THIL
Sbjct: 552 -----VAEFSVENVQLYNGYVFHTGQLGEGKLSVGDKVIASFDELRRFPIKNNHTGTHIL 606
Query: 441 NHALRFVLGPEADQKGSLV 459
N AL+ VLG + DQKGSLV
Sbjct: 607 NFALKEVLGNDVDQKGSLV 625
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 35/47 (74%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+ K L G WRLYDTYGFPVDLT+LM EEKGL +D +E AK+++
Sbjct: 409 KDKTLDGLQVWRLYDTYGFPVDLTELMAEEKGLKIDGPGFEKAKQES 455
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGS-NIVSYCGSKG 109
+P S+ + SVEFCGGTH++ + +F I E IAKG+ IV+ GS+
Sbjct: 705 DPTSEEWQKYSVEFCGGTHVSKTGDIKEFVIIEESGIAKGTRRIVAVSGSEA 756
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEGFMI 270
LR + FVD +S G + G++LD + FYAEQGGQ YD G ++
Sbjct: 505 LRIFDGENFVDEISEVGKQYGVILDSTCFYAEQGGQEYDMGTLV 548
>gi|30064057|ref|NP_838228.1| alanyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|56480163|ref|NP_708505.2| alanyl-tRNA synthetase [Shigella flexneri 2a str. 301]
gi|110806677|ref|YP_690197.1| alanyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
gi|384544280|ref|YP_005728343.1| alanyl-tRNA synthetase [Shigella flexneri 2002017]
gi|417703420|ref|ZP_12352526.1| alanyl-tRNA synthetase [Shigella flexneri K-218]
gi|417724324|ref|ZP_12373126.1| alanyl-tRNA synthetase [Shigella flexneri K-304]
gi|417734721|ref|ZP_12383369.1| alanyl-tRNA synthetase [Shigella flexneri 2747-71]
gi|420332576|ref|ZP_14834226.1| alanyl-tRNA synthetase [Shigella flexneri K-1770]
gi|424839065|ref|ZP_18263702.1| alanyl-tRNA synthetase [Shigella flexneri 5a str. M90T]
gi|44888327|sp|Q7UBU3.1|SYA_SHIFL RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|123146773|sp|Q0T1C3.1|SYA_SHIF8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|30042313|gb|AAP18038.1| alanyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|56383714|gb|AAN44212.2| alanyl-tRNA synthetase [Shigella flexneri 2a str. 301]
gi|110616225|gb|ABF04892.1| alanyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
gi|281602067|gb|ADA75051.1| Alanyl-tRNA synthetase [Shigella flexneri 2002017]
gi|332755665|gb|EGJ86028.1| alanyl-tRNA synthetase [Shigella flexneri 2747-71]
gi|333000647|gb|EGK20224.1| alanyl-tRNA synthetase [Shigella flexneri K-218]
gi|333015876|gb|EGK35212.1| alanyl-tRNA synthetase [Shigella flexneri K-304]
gi|383468117|gb|EID63138.1| alanyl-tRNA synthetase [Shigella flexneri 5a str. M90T]
gi|391249407|gb|EIQ08642.1| alanyl-tRNA synthetase [Shigella flexneri K-1770]
Length = 876
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ ID ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADIDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|422374963|ref|ZP_16455236.1| alanyl-tRNA synthetase [Escherichia coli MS 60-1]
gi|324013703|gb|EGB82922.1| alanyl-tRNA synthetase [Escherichia coli MS 60-1]
Length = 784
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|417744544|ref|ZP_12393068.1| alanyl-tRNA synthetase [Shigella flexneri 2930-71]
gi|332765646|gb|EGJ95859.1| alanyl-tRNA synthetase [Shigella flexneri 2930-71]
Length = 833
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 437 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 473
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ ID ARR I NH+ATH+++ AL
Sbjct: 474 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADIDEARRARIRLNHSATHLMHAAL 531
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 532 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 565
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 337 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 395
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 396 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 455
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 456 YAESGGQVGDK 466
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 425 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 474
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 437 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 473
>gi|154497721|ref|ZP_02036099.1| hypothetical protein BACCAP_01697 [Bacteroides capillosus ATCC
29799]
gi|150273219|gb|EDN00364.1| alanine--tRNA ligase [Pseudoflavonifractor capillosus ATCC 29799]
Length = 890
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/264 (30%), Positives = 120/264 (45%), Gaps = 48/264 (18%)
Query: 230 FSYNKQFVDSVSSGTEAGILLDKSNF--------YAEQGGQIYDEGFMIGVNDEGTVVGL 281
S +K+ + V SG +A L D F EQG + EGF + + +E V
Sbjct: 384 LSGHKEKGEKVFSGADAFKLYDTYGFPIDLTIEMVQEQGMTVDQEGFKV-LMEEQKVRAR 442
Query: 282 RYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS----NKQFVDSVSSGTEAGI 337
+ + D +G E G + ++ F I D ++ N+Q + + G EA +
Sbjct: 443 KAREALGDLGWAGVEFGKDVPETQFVGYDHTSIDDAKVVALVVENEQ-AEELMPGVEAIV 501
Query: 338 LLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKK 397
+LDK+ FYAE GGQ+ D G +I + D QF +++++K
Sbjct: 502 VLDKTPFYAEMGGQVADHG-VITMGD------------------------AQFQVTDVQK 536
Query: 398 KKKLVKLLHTLSHT---LRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQ 454
K K +HT T +++GD + ID RR+ IM H+ATH+L+ ALR VLG Q
Sbjct: 537 NKG-GKYMHTGKLTGGVIKLGDTVSASIDVKRRKAIMRAHSATHLLDKALRTVLGDHVQQ 595
Query: 455 KGSLVYRYHL-----HENIMECEE 473
GSLV L H + M EE
Sbjct: 596 AGSLVEEDRLRFDFTHFSAMTAEE 619
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 5/66 (7%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDME----VYEDAKKKA 56
ML + GE KV G A++LYDTYGFP+DLT MV+E+G++VD E + E+ K +A
Sbjct: 383 MLSGHKEKGE-KVFSGADAFKLYDTYGFPIDLTIEMVQEQGMTVDQEGFKVLMEEQKVRA 441
Query: 57 QSEPES 62
+ E+
Sbjct: 442 RKAREA 447
>gi|261342139|ref|ZP_05969997.1| alanine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
gi|288315472|gb|EFC54410.1| alanine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
Length = 875
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDS+S+G EA ++LDK+ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDSISAGQEAVVILDKTPFYAESGGQVGDKG-------------------ELKGNGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
FS+S+ +K + + L S +L+VG+ ++ ++D ARR I NH+ATH+++ AL
Sbjct: 519 ----FSVSDTQKYGQAIGHQGKLVSGSLKVGEGVQANVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 REVLGTHVAQKGSLV 589
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VDS+S+G EA ++LDK+ FYAE GGQ+ D+G + F SVS +
Sbjct: 468 GNVTALFVDGKAVDSISAGQEAVVILDKTPFYAESGGQVGDKGELKGNGFSFSVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNA 448
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++++ EF G L + +V + + ++I+ G V + G + D
Sbjct: 449 MIRVDSASEFKGYDALELTGNVTALFVDGKAVDSISAGQEAVVILDKTPFYAESGGQVGD 508
Query: 121 E 121
+
Sbjct: 509 K 509
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VDS+S+G EA ++LDK+ FYAE GGQ+ D+G + G
Sbjct: 480 VDSISAGQEAVVILDKTPFYAESGGQVGDKGELKG 514
>gi|254581276|ref|XP_002496623.1| ZYRO0D04378p [Zygosaccharomyces rouxii]
gi|238939515|emb|CAR27690.1| ZYRO0D04378p [Zygosaccharomyces rouxii]
Length = 956
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 77/140 (55%), Gaps = 30/140 (21%)
Query: 324 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
+FV+ +S G + G++LDK+ FYAEQGGQ YD G ++ ++D ++
Sbjct: 512 KFVNEISEPGKKYGVILDKTCFYAEQGGQEYDTGKLV-IDDVAE---------------- 554
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHTATHI 439
F++ N++ V HT L L VG+K+ D RR PI +NHT THI
Sbjct: 555 -------FNVENVQLYNGFV--FHTGSLLEGKLSVGNKIIASYDELRRFPIKNNHTGTHI 605
Query: 440 LNHALRFVLGPEADQKGSLV 459
LN ALR VLG + +QKGSLV
Sbjct: 606 LNFALREVLGNDIEQKGSLV 625
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/45 (62%), Positives = 35/45 (77%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
K L G WRLYDTYGFPVDLT+LM EEKGL++D +E AK+++
Sbjct: 411 KTLDGLQVWRLYDTYGFPVDLTELMAEEKGLTIDGPGFEKAKQES 455
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
L+ +FV+ +S G + G++LDK+ FYAEQGGQ YD G ++
Sbjct: 505 LKLHDGTKFVNEISEPGKKYGVILDKTCFYAEQGGQEYDTGKLV 548
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ P ++ + SVEFCGGTH+ + F I E IAKG IV+ GS+
Sbjct: 704 ANPSNEEWSKYSVEFCGGTHVVKTGDIKVFVILEESGIAKGIRRIVAVTGSEA 756
>gi|321260042|ref|XP_003194741.1| alanine-tRNA ligase [Cryptococcus gattii WM276]
gi|317461213|gb|ADV22954.1| Alanine-tRNA ligase, putative [Cryptococcus gattii WM276]
Length = 1012
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 78/141 (55%), Gaps = 26/141 (18%)
Query: 322 NKQFVDSVS---SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
N +F++S S T GILLD++NFYAE GGQ YD G +I ++D+++ ++ + N
Sbjct: 565 NSKFLNSTSELPPNTTFGILLDRTNFYAESGGQEYDTG-VIAIDDKAEFKVEDVQVYN-- 621
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
Y L I +++ + + VGD++ D RR PI +NHT TH
Sbjct: 622 --GYVLHI------GRMEEGE------------IEVGDEVICTYDELRRWPIRNNHTGTH 661
Query: 439 ILNHALRFVLGPEADQKGSLV 459
ILN ALR VLG DQKGSLV
Sbjct: 662 ILNFALREVLGDHIDQKGSLV 682
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/50 (58%), Positives = 35/50 (70%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
T A + VL G WRLYDTYGFPVDLTQ+M EE+GL +D E +E A+
Sbjct: 457 TTAIAEKRTVLSGKDIWRLYDTYGFPVDLTQIMAEERGLKIDQEAFEKAR 506
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 61 ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGS 117
E +TS+EFCGGTH+A + DF I E +IAKG IV+ G S G+
Sbjct: 764 EDARWRQTSIEFCGGTHVAKTDDIKDFVIIEESSIAKGIRRIVAVTGHDAHDVSRKGA 821
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 4/48 (8%)
Query: 232 YNKQFVDSVS---SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEG 276
+N +F++S S T GILLD++NFYAE GGQ YD G +I ++D+
Sbjct: 564 HNSKFLNSTSELPPNTTFGILLDRTNFYAESGGQEYDTG-VIAIDDKA 610
>gi|300815902|ref|ZP_07096126.1| alanyl-tRNA synthetase [Escherichia coli MS 107-1]
gi|415875523|ref|ZP_11542227.1| alanine--tRNA ligase [Escherichia coli MS 79-10]
gi|300531831|gb|EFK52893.1| alanyl-tRNA synthetase [Escherichia coli MS 107-1]
gi|342929259|gb|EGU97981.1| alanine--tRNA ligase [Escherichia coli MS 79-10]
Length = 784
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|295097277|emb|CBK86367.1| alanyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 875
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDS+S+G EA ++LDK+ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDSISAGQEAVVILDKTPFYAESGGQVGDKG-------------------ELKGNGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
FS+S+ +K + + L S +L+VG+ ++ ++D ARR I NH+ATH+++ AL
Sbjct: 519 ----FSVSDTQKYGQAIGHQGKLVSGSLKVGEGVQANVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 REVLGTHVAQKGSLV 589
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 13/129 (10%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
+AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +
Sbjct: 382 LAKL-KGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESS 440
Query: 65 G----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQ 112
G ++++ EF G LA+ +V + + ++I+ G V +
Sbjct: 441 GFGADYNAMIRVDSASEFKGYEELALTSNVTALFVDGKAVDSISAGQEAVVILDKTPFYA 500
Query: 113 SHSGSINDE 121
G + D+
Sbjct: 501 ESGGQVGDK 509
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 277 TVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAG 336
V L + + VDS+S+G EA ++LDK+ FYAE GGQ+ D+G + F SVS + G
Sbjct: 469 NVTALFVDGKAVDSISAGQEAVVILDKTPFYAESGGQVGDKGELKGNGFSFSVSDTQKYG 528
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VDS+S+G EA ++LDK+ FYAE GGQ+ D+G + G
Sbjct: 480 VDSISAGQEAVVILDKTPFYAESGGQVGDKGELKG 514
>gi|444355089|ref|YP_007391233.1| Alanyl-tRNA synthetase (EC 6.1.1.7) [Enterobacter aerogenes
EA1509E]
gi|443905919|emb|CCG33693.1| Alanyl-tRNA synthetase (EC 6.1.1.7) [Enterobacter aerogenes
EA1509E]
Length = 846
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 80/135 (59%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDSVS+G +A ++LD++ FYAE GGQ+ D+G L+G+ ++
Sbjct: 451 VDSVSAGQDAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFS-- 489
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + + S +L+VGD ++ +D ARR+ I NH+ATH+++ AL
Sbjct: 490 ----FAVSDTQKYGQAIGHIGKVASGSLKVGDAVQADVDQARRQRIRLNHSATHLMHAAL 545
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 546 RQVLGTHVAQKGSLV 560
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +G
Sbjct: 360 TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNA 419
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++ + EF G HL + V I + ++++ G + V + G + D
Sbjct: 420 MIRVDGASEFKGYDHLELNGKVTALFIDGKAVDSVSAGQDAVVVLDQTPFYAESGGQVGD 479
Query: 121 E 121
+
Sbjct: 480 K 480
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VDSVS+G +A ++LD++ FYAE GGQ+ D+G + F +VS +
Sbjct: 439 GKVTALFIDGKAVDSVSAGQDAVVVLDQTPFYAESGGQVGDKGELKGAGFSFAVSDTQKY 498
Query: 336 G 336
G
Sbjct: 499 G 499
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VDSVS+G +A ++LD++ FYAE GGQ+ D+G + G
Sbjct: 451 VDSVSAGQDAVVVLDQTPFYAESGGQVGDKGELKGA 486
>gi|300976926|ref|ZP_07173678.1| alanyl-tRNA synthetase [Escherichia coli MS 45-1]
gi|301027052|ref|ZP_07190429.1| alanyl-tRNA synthetase [Escherichia coli MS 69-1]
gi|301049555|ref|ZP_07196510.1| alanyl-tRNA synthetase [Escherichia coli MS 185-1]
gi|386615407|ref|YP_006135073.1| alanyl-tRNA synthetase AlaS [Escherichia coli UMNK88]
gi|422363610|ref|ZP_16444147.1| alanyl-tRNA synthetase [Escherichia coli MS 153-1]
gi|422369549|ref|ZP_16449949.1| alanyl-tRNA synthetase [Escherichia coli MS 16-3]
gi|422383038|ref|ZP_16463190.1| alanyl-tRNA synthetase [Escherichia coli MS 57-2]
gi|425289817|ref|ZP_18680651.1| alanine--tRNA ligase [Escherichia coli 3006]
gi|425306432|ref|ZP_18696127.1| alanine--tRNA ligase [Escherichia coli N1]
gi|300298680|gb|EFJ55065.1| alanyl-tRNA synthetase [Escherichia coli MS 185-1]
gi|300395217|gb|EFJ78755.1| alanyl-tRNA synthetase [Escherichia coli MS 69-1]
gi|300409940|gb|EFJ93478.1| alanyl-tRNA synthetase [Escherichia coli MS 45-1]
gi|315293661|gb|EFU53013.1| alanyl-tRNA synthetase [Escherichia coli MS 153-1]
gi|315298718|gb|EFU57972.1| alanyl-tRNA synthetase [Escherichia coli MS 16-3]
gi|324005757|gb|EGB74976.1| alanyl-tRNA synthetase [Escherichia coli MS 57-2]
gi|332344576|gb|AEE57910.1| alanyl-tRNA synthetase AlaS [Escherichia coli UMNK88]
gi|408212322|gb|EKI36848.1| alanine--tRNA ligase [Escherichia coli 3006]
gi|408227225|gb|EKI50822.1| alanine--tRNA ligase [Escherichia coli N1]
Length = 784
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|218701187|ref|YP_002408816.1| alanyl-tRNA synthetase [Escherichia coli IAI39]
gi|386625414|ref|YP_006145142.1| alanyl-tRNA synthetase [Escherichia coli O7:K1 str. CE10]
gi|218371173|emb|CAR19004.1| alanyl-tRNA synthetase [Escherichia coli IAI39]
gi|349739151|gb|AEQ13857.1| alanyl-tRNA synthetase [Escherichia coli O7:K1 str. CE10]
Length = 876
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLATGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKSEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|300919279|ref|ZP_07135796.1| alanyl-tRNA synthetase [Escherichia coli MS 115-1]
gi|300413634|gb|EFJ96944.1| alanyl-tRNA synthetase [Escherichia coli MS 115-1]
Length = 784
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQTDVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|449546469|gb|EMD37438.1| hypothetical protein CERSUDRAFT_83193 [Ceriporiopsis subvermispora
B]
Length = 956
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 77/142 (54%), Gaps = 28/142 (19%)
Query: 322 NKQFVDSVSSGTEA---GILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
NK F D+ SS E G+LLD+++FYAE GGQ YD G ++ ++
Sbjct: 511 NKTFPDATSSIPEDAVFGLLLDRTSFYAESGGQEYDTGSIV-----------------ID 553
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTAT 437
G +F ++N++ V + ++ + +L VGD++ D RR P+ +NHTAT
Sbjct: 554 G-------VAEFEVTNVQVSNGYVLHIGSMKYGSLSVGDEVVSSYDELRRWPLRNNHTAT 606
Query: 438 HILNHALRFVLGPEADQKGSLV 459
HILN+ LR LG DQKGSLV
Sbjct: 607 HILNYCLRETLGDHIDQKGSLV 628
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 40/57 (70%), Gaps = 2/57 (3%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGME 67
SK L G WRLYDTYGFPVDLT+LM EE GL VD E +E A +A S+ S+A ++
Sbjct: 410 SKQLSGKDVWRLYDTYGFPVDLTRLMAEELGLVVDEEEFEAA--QAHSKEASKASLK 464
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 268 FMIGVNDEGTVVGLRYNKQFVDSVSSGTEA---GILLDKSNFYAEQGGQIYDEG 318
F +G N VV + +NK F D+ SS E G+LLD+++FYAE GGQ YD G
Sbjct: 496 FALG-NINAKVVAIYHNKTFPDATSSIPEDAVFGLLLDRTSFYAESGGQEYDTG 548
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDSVSSGTEA---GILLDKSNFYAEQGGQIYDEGFMI 270
+NK F D+ SS E G+LLD+++FYAE GGQ YD G ++
Sbjct: 510 HNKTFPDATSSIPEDAVFGLLLDRTSFYAESGGQEYDTGSIV 551
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 68 TSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
TS+E CGGTH+A + DF + E IAKG IV+ G
Sbjct: 717 TSIELCGGTHVAKTGDIKDFVVVEESGIAKGIRRIVAVTG 756
>gi|375256922|ref|YP_005016092.1| alanyl-tRNA synthetase [Klebsiella oxytoca KCTC 1686]
gi|365906400|gb|AEX01853.1| alanyl-tRNA synthetase [Klebsiella oxytoca KCTC 1686]
Length = 875
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD+V++G EA ++LD++ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDAVNAGQEAVVILDQTPFYAESGGQVGDKG-------------------ELKGAGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F +S+ +K + + + L S +L+VGD ++ +D ARR+ I NH+ATH+++ AL
Sbjct: 519 ----FQVSDAQKYGQAIGHIGKLTSGSLKVGDAVQADVDQARRQRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG 65
+G
Sbjct: 439 SSG 441
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VD+V++G EA ++LD++ FYAE GGQ+ D+G + F VS +
Sbjct: 468 GKVTALFIDGKAVDAVNAGQEAVVILDQTPFYAESGGQVGDKGELKGAGFSFQVSDAQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VD+V++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDAVNAGQEAVVILDQTPFYAESGGQVGDKGELKGA 515
>gi|422356981|ref|ZP_16437654.1| alanyl-tRNA synthetase [Escherichia coli MS 110-3]
gi|315289216|gb|EFU48614.1| alanyl-tRNA synthetase [Escherichia coli MS 110-3]
Length = 784
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD ++ A ++ +
Sbjct: 288 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|312965610|ref|ZP_07779840.1| alanyl-tRNA synthetase [Escherichia coli 2362-75]
gi|312289759|gb|EFR17649.1| alanyl-tRNA synthetase [Escherichia coli 2362-75]
Length = 784
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|420337833|ref|ZP_14839395.1| alanyl-tRNA synthetase [Shigella flexneri K-315]
gi|391259707|gb|EIQ18781.1| alanyl-tRNA synthetase [Shigella flexneri K-315]
Length = 784
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|419143619|ref|ZP_13688355.1| alanyl-tRNA synthetase [Escherichia coli DEC6A]
gi|377992935|gb|EHV56075.1| alanyl-tRNA synthetase [Escherichia coli DEC6A]
Length = 784
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|336246806|ref|YP_004590516.1| alanyl-tRNA synthetase [Enterobacter aerogenes KCTC 2190]
gi|334732862|gb|AEG95237.1| alanyl-tRNA synthetase [Enterobacter aerogenes KCTC 2190]
Length = 875
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDSVS+G +A ++LD++ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDSVSAGQDAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLL-HTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + S +L+VGD ++ +D ARR+ I NH+ATH+++ AL
Sbjct: 519 ----FAVSDTQKYGQAIGHIGKVASGSLKVGDAVQADVDQARRQRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNA 448
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++ + EF G HL + V I + ++++ G + V + G + D
Sbjct: 449 MIRVDGASEFKGYDHLELNGKVTALFIDGKAVDSVSAGQDAVVVLDQTPFYAESGGQVGD 508
Query: 121 E 121
+
Sbjct: 509 K 509
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VDSVS+G +A ++LD++ FYAE GGQ+ D+G + F +VS +
Sbjct: 468 GKVTALFIDGKAVDSVSAGQDAVVVLDQTPFYAESGGQVGDKGELKGAGFSFAVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VDSVS+G +A ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDSVSAGQDAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|300941066|ref|ZP_07155582.1| alanyl-tRNA synthetase [Escherichia coli MS 21-1]
gi|300454193|gb|EFK17686.1| alanyl-tRNA synthetase [Escherichia coli MS 21-1]
Length = 784
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|402839504|ref|ZP_10887991.1| alanine--tRNA ligase [Klebsiella sp. OBRC7]
gi|423104447|ref|ZP_17092149.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5242]
gi|376382410|gb|EHS95143.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5242]
gi|402287778|gb|EJU36208.1| alanine--tRNA ligase [Klebsiella sp. OBRC7]
Length = 875
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD+V++G EA ++LD++ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDAVNAGQEAVVILDQTPFYAESGGQVGDKG-------------------ELKGAGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F +S+ +K + + + L S +L+VGD ++ +D ARR+ I NH+ATH+++ AL
Sbjct: 519 ----FQVSDAQKYGQAIGHIGKLTSGSLKVGDAVQADVDQARRQRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG 65
+G
Sbjct: 439 SSG 441
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VD+V++G EA ++LD++ FYAE GGQ+ D+G + F VS +
Sbjct: 468 GKVTALFIDGKAVDAVNAGQEAVVILDQTPFYAESGGQVGDKGELKGAGFSFQVSDAQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VD+V++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDAVNAGQEAVVILDQTPFYAESGGQVGDKGELKGA 515
>gi|300820470|ref|ZP_07100621.1| alanyl-tRNA synthetase [Escherichia coli MS 119-7]
gi|300906808|ref|ZP_07124489.1| alanyl-tRNA synthetase [Escherichia coli MS 84-1]
gi|300924257|ref|ZP_07140242.1| alanyl-tRNA synthetase [Escherichia coli MS 182-1]
gi|301305420|ref|ZP_07211514.1| alanyl-tRNA synthetase [Escherichia coli MS 124-1]
gi|301326280|ref|ZP_07219656.1| alanyl-tRNA synthetase [Escherichia coli MS 78-1]
gi|309795155|ref|ZP_07689574.1| alanyl-tRNA synthetase [Escherichia coli MS 145-7]
gi|414577443|ref|ZP_11434619.1| alanyl-tRNA synthetase [Shigella sonnei 3233-85]
gi|415786469|ref|ZP_11493547.1| alanyl-tRNA synthetase [Escherichia coli EPECa14]
gi|415802883|ref|ZP_11500189.1| alanyl-tRNA synthetase [Escherichia coli E128010]
gi|415830120|ref|ZP_11516022.1| alanyl-tRNA synthetase [Escherichia coli OK1357]
gi|415847102|ref|ZP_11525841.1| alanyl-tRNA synthetase [Shigella sonnei 53G]
gi|415864934|ref|ZP_11537881.1| alanyl-tRNA synthetase [Escherichia coli MS 85-1]
gi|417582166|ref|ZP_12232967.1| alanyl-tRNA synthetase [Escherichia coli STEC_B2F1]
gi|417593011|ref|ZP_12243704.1| alanyl-tRNA synthetase [Escherichia coli 2534-86]
gi|417597981|ref|ZP_12248615.1| alanyl-tRNA synthetase [Escherichia coli 3030-1]
gi|417603349|ref|ZP_12253916.1| alanyl-tRNA synthetase [Escherichia coli STEC_94C]
gi|417609302|ref|ZP_12259802.1| alanyl-tRNA synthetase [Escherichia coli STEC_DG131-3]
gi|417640466|ref|ZP_12290606.1| alanyl-tRNA synthetase [Escherichia coli TX1999]
gi|417668068|ref|ZP_12317610.1| alanyl-tRNA synthetase [Escherichia coli STEC_O31]
gi|419171379|ref|ZP_13715264.1| alanyl-tRNA synthetase [Escherichia coli DEC7A]
gi|419192758|ref|ZP_13736209.1| alanyl-tRNA synthetase [Escherichia coli DEC7E]
gi|419198263|ref|ZP_13741590.1| alanyl-tRNA synthetase [Escherichia coli DEC8A]
gi|419301435|ref|ZP_13843433.1| alanyl-tRNA synthetase [Escherichia coli DEC11C]
gi|419307564|ref|ZP_13849462.1| alanyl-tRNA synthetase [Escherichia coli DEC11D]
gi|419312580|ref|ZP_13854440.1| alanyl-tRNA synthetase [Escherichia coli DEC11E]
gi|419317967|ref|ZP_13859768.1| alanyl-tRNA synthetase [Escherichia coli DEC12A]
gi|419330209|ref|ZP_13871809.1| alanyl-tRNA synthetase [Escherichia coli DEC12C]
gi|419371151|ref|ZP_13912266.1| alanyl-tRNA synthetase [Escherichia coli DEC14A]
gi|420359983|ref|ZP_14860946.1| alanyl-tRNA synthetase [Shigella sonnei 3226-85]
gi|420386771|ref|ZP_14886118.1| alanyl-tRNA synthetase [Escherichia coli EPECa12]
gi|422354974|ref|ZP_16435697.1| alanyl-tRNA synthetase [Escherichia coli MS 117-3]
gi|425380864|ref|ZP_18764874.1| alanine--tRNA ligase [Escherichia coli EC1865]
gi|425423501|ref|ZP_18804665.1| alanine--tRNA ligase [Escherichia coli 0.1288]
gi|300401409|gb|EFJ84947.1| alanyl-tRNA synthetase [Escherichia coli MS 84-1]
gi|300419533|gb|EFK02844.1| alanyl-tRNA synthetase [Escherichia coli MS 182-1]
gi|300526734|gb|EFK47803.1| alanyl-tRNA synthetase [Escherichia coli MS 119-7]
gi|300839340|gb|EFK67100.1| alanyl-tRNA synthetase [Escherichia coli MS 124-1]
gi|300847020|gb|EFK74780.1| alanyl-tRNA synthetase [Escherichia coli MS 78-1]
gi|308121126|gb|EFO58388.1| alanyl-tRNA synthetase [Escherichia coli MS 145-7]
gi|315254472|gb|EFU34440.1| alanyl-tRNA synthetase [Escherichia coli MS 85-1]
gi|323154906|gb|EFZ41098.1| alanyl-tRNA synthetase [Escherichia coli EPECa14]
gi|323159803|gb|EFZ45775.1| alanyl-tRNA synthetase [Escherichia coli E128010]
gi|323167133|gb|EFZ52851.1| alanyl-tRNA synthetase [Shigella sonnei 53G]
gi|323183219|gb|EFZ68616.1| alanyl-tRNA synthetase [Escherichia coli OK1357]
gi|324017048|gb|EGB86267.1| alanyl-tRNA synthetase [Escherichia coli MS 117-3]
gi|345335103|gb|EGW67542.1| alanyl-tRNA synthetase [Escherichia coli 2534-86]
gi|345335623|gb|EGW68060.1| alanyl-tRNA synthetase [Escherichia coli STEC_B2F1]
gi|345348871|gb|EGW81162.1| alanyl-tRNA synthetase [Escherichia coli STEC_94C]
gi|345351801|gb|EGW84053.1| alanyl-tRNA synthetase [Escherichia coli 3030-1]
gi|345356513|gb|EGW88714.1| alanyl-tRNA synthetase [Escherichia coli STEC_DG131-3]
gi|345392867|gb|EGX22646.1| alanyl-tRNA synthetase [Escherichia coli TX1999]
gi|378014353|gb|EHV77258.1| alanyl-tRNA synthetase [Escherichia coli DEC7A]
gi|378037460|gb|EHV99986.1| alanyl-tRNA synthetase [Escherichia coli DEC7E]
gi|378045461|gb|EHW07855.1| alanyl-tRNA synthetase [Escherichia coli DEC8A]
gi|378147526|gb|EHX08673.1| alanyl-tRNA synthetase [Escherichia coli DEC11D]
gi|378149561|gb|EHX10683.1| alanyl-tRNA synthetase [Escherichia coli DEC11C]
gi|378156657|gb|EHX17703.1| alanyl-tRNA synthetase [Escherichia coli DEC11E]
gi|378167764|gb|EHX28675.1| alanyl-tRNA synthetase [Escherichia coli DEC12A]
gi|378168684|gb|EHX29587.1| alanyl-tRNA synthetase [Escherichia coli DEC12C]
gi|378215829|gb|EHX76121.1| alanyl-tRNA synthetase [Escherichia coli DEC14A]
gi|391280231|gb|EIQ38905.1| alanyl-tRNA synthetase [Shigella sonnei 3226-85]
gi|391283515|gb|EIQ42134.1| alanyl-tRNA synthetase [Shigella sonnei 3233-85]
gi|391304381|gb|EIQ62194.1| alanyl-tRNA synthetase [Escherichia coli EPECa12]
gi|397784034|gb|EJK94890.1| alanyl-tRNA synthetase [Escherichia coli STEC_O31]
gi|408295326|gb|EKJ13656.1| alanine--tRNA ligase [Escherichia coli EC1865]
gi|408342757|gb|EKJ57175.1| alanine--tRNA ligase [Escherichia coli 0.1288]
Length = 784
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|300975107|ref|ZP_07172874.1| alanyl-tRNA synthetase [Escherichia coli MS 200-1]
gi|300308788|gb|EFJ63308.1| alanyl-tRNA synthetase [Escherichia coli MS 200-1]
Length = 784
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|417624663|ref|ZP_12274960.1| alanyl-tRNA synthetase [Escherichia coli STEC_H.1.8]
gi|345376429|gb|EGX08367.1| alanyl-tRNA synthetase [Escherichia coli STEC_H.1.8]
Length = 784
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|425301529|ref|ZP_18691414.1| alanine--tRNA ligase [Escherichia coli 07798]
gi|408212055|gb|EKI36588.1| alanine--tRNA ligase [Escherichia coli 07798]
Length = 784
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD ++ A ++ +
Sbjct: 288 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + S +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|345313605|ref|XP_001507948.2| PREDICTED: alanyl-tRNA synthetase, mitochondrial-like
[Ornithorhynchus anatinus]
Length = 386
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 73/139 (52%), Gaps = 22/139 (15%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ ++ +D G + G+LLD+++FYAEQGGQ D G+++ +E
Sbjct: 92 YGADGAALDEAGGGQKCGLLLDRTSFYAEQGGQAGDRGYLL-----------------IE 134
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G + L F ++ + V T LRVGD+++L +D A R M HTATH
Sbjct: 135 GQQDVL-----FPVAGAQLSGGFVLHEVTAYGRLRVGDRVQLFVDEAWRLGCMEKHTATH 189
Query: 439 ILNHALRFVLGPEADQKGS 457
+L+ ALR VLGPE Q+G+
Sbjct: 190 LLSWALRRVLGPEVAQRGA 208
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 27/41 (65%)
Query: 230 FSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ + +D G + G+LLD+++FYAEQGGQ D G+++
Sbjct: 92 YGADGAALDEAGGGQKCGLLLDRTSFYAEQGGQAGDRGYLL 132
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 288 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
+D G + G+LLD+++FYAEQGGQ D G++
Sbjct: 99 LDEAGGGQKCGLLLDRTSFYAEQGGQAGDRGYL 131
>gi|415839844|ref|ZP_11521541.1| alanyl-tRNA synthetase [Escherichia coli RN587/1]
gi|425279063|ref|ZP_18670296.1| alanine--tRNA ligase [Escherichia coli ARS4.2123]
gi|323188423|gb|EFZ73709.1| alanyl-tRNA synthetase [Escherichia coli RN587/1]
gi|408200094|gb|EKI25282.1| alanine--tRNA ligase [Escherichia coli ARS4.2123]
Length = 784
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD ++ A ++ +
Sbjct: 288 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + S +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|300930550|ref|ZP_07145945.1| alanyl-tRNA synthetase [Escherichia coli MS 187-1]
gi|300947031|ref|ZP_07161254.1| alanyl-tRNA synthetase [Escherichia coli MS 116-1]
gi|300954931|ref|ZP_07167347.1| alanyl-tRNA synthetase [Escherichia coli MS 175-1]
gi|301645328|ref|ZP_07245276.1| alanyl-tRNA synthetase [Escherichia coli MS 146-1]
gi|312973095|ref|ZP_07787268.1| alanyl-tRNA synthetase [Escherichia coli 1827-70]
gi|415779065|ref|ZP_11489837.1| alanyl-tRNA synthetase [Escherichia coli 3431]
gi|417635703|ref|ZP_12285914.1| alanyl-tRNA synthetase [Escherichia coli STEC_S1191]
gi|418304236|ref|ZP_12916030.1| alanyl-tRNA synthetase [Escherichia coli UMNF18]
gi|419155106|ref|ZP_13699666.1| alanyl-tRNA synthetase [Escherichia coli DEC6C]
gi|419160405|ref|ZP_13704907.1| alanyl-tRNA synthetase [Escherichia coli DEC6D]
gi|425116220|ref|ZP_18518013.1| alanine--tRNA ligase [Escherichia coli 8.0566]
gi|425120983|ref|ZP_18522672.1| alanine--tRNA ligase [Escherichia coli 8.0569]
gi|425273859|ref|ZP_18665265.1| alanine--tRNA ligase [Escherichia coli TW15901]
gi|425284388|ref|ZP_18675421.1| alanine--tRNA ligase [Escherichia coli TW00353]
gi|300318120|gb|EFJ67904.1| alanyl-tRNA synthetase [Escherichia coli MS 175-1]
gi|300453345|gb|EFK16965.1| alanyl-tRNA synthetase [Escherichia coli MS 116-1]
gi|300461571|gb|EFK25064.1| alanyl-tRNA synthetase [Escherichia coli MS 187-1]
gi|301076398|gb|EFK91204.1| alanyl-tRNA synthetase [Escherichia coli MS 146-1]
gi|310333037|gb|EFQ00251.1| alanyl-tRNA synthetase [Escherichia coli 1827-70]
gi|315615081|gb|EFU95718.1| alanyl-tRNA synthetase [Escherichia coli 3431]
gi|339416334|gb|AEJ58006.1| alanyl-tRNA synthetase [Escherichia coli UMNF18]
gi|345386573|gb|EGX16406.1| alanyl-tRNA synthetase [Escherichia coli STEC_S1191]
gi|377995624|gb|EHV58740.1| alanyl-tRNA synthetase [Escherichia coli DEC6C]
gi|378006374|gb|EHV69358.1| alanyl-tRNA synthetase [Escherichia coli DEC6D]
gi|408192100|gb|EKI17684.1| alanine--tRNA ligase [Escherichia coli TW15901]
gi|408201020|gb|EKI26193.1| alanine--tRNA ligase [Escherichia coli TW00353]
gi|408566417|gb|EKK42488.1| alanine--tRNA ligase [Escherichia coli 8.0566]
gi|408567535|gb|EKK43590.1| alanine--tRNA ligase [Escherichia coli 8.0569]
Length = 784
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|417619271|ref|ZP_12269684.1| alanyl-tRNA synthetase [Escherichia coli G58-1]
gi|345374584|gb|EGX06535.1| alanyl-tRNA synthetase [Escherichia coli G58-1]
Length = 638
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 242 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 280
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 281 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 336
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 337 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 370
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 142 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 200
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 201 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 260
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 261 YAESGGQVGDK 271
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 230 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 279
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 242 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 278
>gi|300899932|ref|ZP_07118138.1| alanyl-tRNA synthetase [Escherichia coli MS 198-1]
gi|300356519|gb|EFJ72389.1| alanyl-tRNA synthetase [Escherichia coli MS 198-1]
Length = 784
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGTN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGTNF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGTN 424
>gi|393217115|gb|EJD02604.1| hypothetical protein FOMMEDRAFT_167809 [Fomitiporia mediterranea
MF3/22]
Length = 956
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 78/144 (54%), Gaps = 32/144 (22%)
Query: 322 NKQFVD---SVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+K FV+ ++S T GI+LDK+NFYAE GGQ YD G + ++
Sbjct: 512 DKSFVNHTGAISEDTTFGIILDKTNFYAEAGGQEYDTG-----------------SITID 554
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHT--LSH-TLRVGDKLKLHIDTARRRPIMSNHT 435
G +F ++N++ V LHT L + L VGD++ D RR P+ +NHT
Sbjct: 555 G-------VAEFEVTNVQSYSGYV--LHTGILKYGRLSVGDEVIATYDELRRWPLRNNHT 605
Query: 436 ATHILNHALRFVLGPEADQKGSLV 459
ATHILN +LR VLG DQKGSLV
Sbjct: 606 ATHILNFSLREVLGDHIDQKGSLV 629
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 41/57 (71%), Gaps = 2/57 (3%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGME 67
SK L G+ WRLYDT+GFPVDLT LM EE GL +D E ++ K +A+S+ S+ G++
Sbjct: 411 SKTLNGEDVWRLYDTFGFPVDLTLLMAEELGLGIDQEGFD--KAQAKSKEASKGGVK 465
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 265 DEGFMIGVNDEGTVVGLRYNKQFVD---SVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
D F +G N TV + ++K FV+ ++S T GI+LDK+NFYAE GGQ YD G ++
Sbjct: 494 DAKFNLG-NITATVKAIYHDKSFVNHTGAISEDTTFGIILDKTNFYAEAGGQEYDTGSIT 552
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%), Gaps = 3/39 (7%)
Query: 232 YNKQFVD---SVSSGTEAGILLDKSNFYAEQGGQIYDEG 267
++K FV+ ++S T GI+LDK+NFYAE GGQ YD G
Sbjct: 511 HDKSFVNHTGAISEDTTFGIILDKTNFYAEAGGQEYDTG 549
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 61 ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVS 103
E+ +TS+EFCGGTH+A + F I E IAKG V+
Sbjct: 711 ENSKWRKTSIEFCGGTHVAKTGDIKGFVIVEESGIAKGIRRVT 753
>gi|226288201|gb|EEH43713.1| alanyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
Length = 962
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 76/141 (53%), Gaps = 26/141 (18%)
Query: 322 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
NK+FVDS + G + GI+LD++NFYAEQGGQ YD G +I ++ ++++ + V +
Sbjct: 513 NKKFVDSSKDIPEGEQFGIILDRTNFYAEQGGQEYDTGKII-IDGKAELAV---EDVQVY 568
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G F+++ + + D + D RR PI +NHT TH
Sbjct: 569 GGYVLHTGFMKYG-------------------SFNINDSVIAEYDELRRWPIRNNHTGTH 609
Query: 439 ILNHALRFVLGPEADQKGSLV 459
ILN ALR VLG +QKGSLV
Sbjct: 610 ILNFALRKVLGDGVEQKGSLV 630
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFC 73
L G WRLYDT+GFPVDLTQLM EE+GL +D +E+A+ +A+ + Q V
Sbjct: 416 LHGADVWRLYDTFGFPVDLTQLMAEERGLKIDNGEFEEARLRAKEASKGQGKQTKDVVKL 475
Query: 74 GGTHLAMAHHVGDFCISSEEAIAKGSNIVS 103
L + + D + + A NI S
Sbjct: 476 TVHDLGLLETMDDVPKTDDSAKFGRGNITS 505
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+NK+FVDS + G + GI+LD++NFYAEQGGQ YD G +I
Sbjct: 512 HNKKFVDSSKDIPEGEQFGIILDRTNFYAEQGGQEYDTGKII 553
>gi|401841914|gb|EJT44225.1| ALA1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 958
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 24/137 (17%)
Query: 324 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
+FV+ ++ G + GI+LDK+ FYAEQGGQ YD G ++ ++D ++ + L N
Sbjct: 512 KFVNEITEPGRKYGIILDKTCFYAEQGGQEYDTGKIV-IDDAAEFNVENVQLYN------ 564
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +L++ K L VGDK+ D RR PI +NHT THILN
Sbjct: 565 ----GFVFHTGSLEEGK------------LSVGDKIIASFDELRRFPIKNNHTGTHILNF 608
Query: 443 ALRFVLGPEADQKGSLV 459
AL+ LG + DQKGSLV
Sbjct: 609 ALKETLGNDIDQKGSLV 625
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
ES+ L G WRLYDTYGFPVDLT+LM EE+GL +D +E AK+++
Sbjct: 409 ESRTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQES 455
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
L+ +FV+ ++ G + GI+LDK+ FYAEQGGQ YD G ++
Sbjct: 505 LKLHDGTKFVNEITEPGRKYGIILDKTCFYAEQGGQEYDTGKIV 548
>gi|365758219|gb|EHN00072.1| Ala1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 958
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 75/137 (54%), Gaps = 24/137 (17%)
Query: 324 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
+FV+ ++ G + GI+LDK+ FYAEQGGQ YD G ++ ++D ++ + L N
Sbjct: 512 KFVNEITEPGRKYGIILDKTCFYAEQGGQEYDTGKIV-IDDAAEFNVENVQLYN------ 564
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +L++ K L VGDK+ D RR PI +NHT THILN
Sbjct: 565 ----GFVFHTGSLEEGK------------LSVGDKIIASFDELRRFPIKNNHTGTHILNF 608
Query: 443 ALRFVLGPEADQKGSLV 459
AL+ LG + DQKGSLV
Sbjct: 609 ALKETLGNDIDQKGSLV 625
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
ES+ L G WRLYDTYGFPVDLT+LM EE+GL +D +E AK+++
Sbjct: 409 ESRTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQES 455
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
L+ +FV+ ++ G + GI+LDK+ FYAEQGGQ YD G ++
Sbjct: 505 LKLHDGTKFVNEITEPGRKYGIILDKTCFYAEQGGQEYDTGKIV 548
>gi|419392780|ref|ZP_13933584.1| alanyl-tRNA synthetase [Escherichia coli DEC15A]
gi|419397762|ref|ZP_13938530.1| alanyl-tRNA synthetase [Escherichia coli DEC15B]
gi|419408333|ref|ZP_13949019.1| alanyl-tRNA synthetase [Escherichia coli DEC15D]
gi|419413827|ref|ZP_13954475.1| alanyl-tRNA synthetase [Escherichia coli DEC15E]
gi|378236348|gb|EHX96397.1| alanyl-tRNA synthetase [Escherichia coli DEC15A]
gi|378243883|gb|EHY03829.1| alanyl-tRNA synthetase [Escherichia coli DEC15B]
gi|378252894|gb|EHY12772.1| alanyl-tRNA synthetase [Escherichia coli DEC15D]
gi|378258532|gb|EHY18352.1| alanyl-tRNA synthetase [Escherichia coli DEC15E]
Length = 839
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 443 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 479
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 480 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 537
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 538 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 571
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 343 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 401
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 402 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 461
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 462 YAESGGQVGDK 472
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 431 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 480
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 443 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 479
>gi|378581074|ref|ZP_09829724.1| alanyl-tRNA synthetase [Pantoea stewartii subsp. stewartii DC283]
gi|377816153|gb|EHT99258.1| alanyl-tRNA synthetase [Pantoea stewartii subsp. stewartii DC283]
Length = 875
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 78/149 (52%), Gaps = 24/149 (16%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+G + VD+VS+G +A ++LD++ FY E GGQ+ D G + G N E Q++
Sbjct: 471 KGLFVAGEAVDTVSAGQDAVVVLDETPFYGESGGQVGDTGVLKGNNVEFQVQ-------- 522
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+ KY I +S S LR+GD+++ +D ARR I NH+A
Sbjct: 523 -DTQKYGQAIGHIGKVS---------------SGQLRIGDRVEAVVDEARRARIRLNHSA 566
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+++ ALR VLG QKGSLV +L
Sbjct: 567 THLMHAALRQVLGEHVAQKGSLVNDKYLR 595
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 66/151 (43%), Gaps = 15/151 (9%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
+AKL + L G+ +RLYDT+GFP DLT + E+ L +D +E A ++ + +
Sbjct: 382 LAKL-KGDTLDGETVFRLYDTFGFPADLTADVCRERNLKIDEAGFEKAMEQQRQRAREAS 440
Query: 65 GM----------ETSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQ 112
G + + F G L +A V ++ E + ++ G + V +
Sbjct: 441 GFGADYSNVIRTDAASSFKGYDQLDLAATVKGLFVAGEAVDTVSAGQDAVVVLDETPFYG 500
Query: 113 SHSGSINDEMVNKYPSLYRLFRTVHKQKYVQ 143
G + D V K ++ F+ QKY Q
Sbjct: 501 ESGGQVGDTGVLKGNNVE--FQVQDTQKYGQ 529
Score = 42.0 bits (97), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 30/45 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
TV GL + VD+VS+G +A ++LD++ FY E GGQ+ D G +
Sbjct: 468 ATVKGLFVAGEAVDTVSAGQDAVVVLDETPFYGESGGQVGDTGVL 512
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
VD+VS+G +A ++LD++ FY E GGQ+ D G + G N E
Sbjct: 480 VDTVSAGQDAVVVLDETPFYGESGGQVGDTGVLKGNNVE 518
>gi|419176413|ref|ZP_13720227.1| alanyl-tRNA synthetase [Escherichia coli DEC7B]
gi|424815237|ref|ZP_18240388.1| alanyl-tRNA synthetase [Escherichia fergusonii ECD227]
gi|325496257|gb|EGC94116.1| alanyl-tRNA synthetase [Escherichia fergusonii ECD227]
gi|378031619|gb|EHV94206.1| alanyl-tRNA synthetase [Escherichia coli DEC7B]
Length = 839
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 443 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 479
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 480 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 537
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 538 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 571
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 343 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 401
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 402 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 461
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 462 YAESGGQVGDK 472
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 431 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 480
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 443 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 479
>gi|297519240|ref|ZP_06937626.1| alanyl-tRNA synthetase [Escherichia coli OP50]
Length = 316
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 84/154 (54%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 128 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 166
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 167 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 222
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 223 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 256
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 28 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 86
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 87 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 146
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 147 YAESGGQVGDK 157
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 116 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 165
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 128 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 164
>gi|418956936|ref|ZP_13508861.1| alanyl-tRNA synthetase [Escherichia coli J53]
gi|384380730|gb|EIE38596.1| alanyl-tRNA synthetase [Escherichia coli J53]
Length = 808
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 412 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 448
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 449 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 506
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 507 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 540
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 312 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 370
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 371 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 430
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 431 YAESGGQVGDK 441
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 400 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 449
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 412 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 448
>gi|417156432|ref|ZP_11994056.1| alanine--tRNA ligase [Escherichia coli 96.0497]
gi|417223320|ref|ZP_12026760.1| alanine--tRNA ligase [Escherichia coli 96.154]
gi|417228954|ref|ZP_12030712.1| alanine--tRNA ligase [Escherichia coli 5.0959]
gi|417251554|ref|ZP_12043319.1| alanine--tRNA ligase [Escherichia coli 4.0967]
gi|417269155|ref|ZP_12056515.1| alanine--tRNA ligase [Escherichia coli 3.3884]
gi|417296601|ref|ZP_12083848.1| alanine--tRNA ligase [Escherichia coli 900105 (10e)]
gi|418267765|ref|ZP_12886743.1| alanyl-tRNA synthetase [Shigella sonnei str. Moseley]
gi|419182013|ref|ZP_13725624.1| alanyl-tRNA synthetase [Escherichia coli DEC7C]
gi|419216941|ref|ZP_13759937.1| alanyl-tRNA synthetase [Escherichia coli DEC8D]
gi|419228094|ref|ZP_13770942.1| alanyl-tRNA synthetase [Escherichia coli DEC9A]
gi|419234071|ref|ZP_13776843.1| alanyl-tRNA synthetase [Escherichia coli DEC9B]
gi|419239093|ref|ZP_13781804.1| alanyl-tRNA synthetase [Escherichia coli DEC9C]
gi|419244608|ref|ZP_13787243.1| alanyl-tRNA synthetase [Escherichia coli DEC9D]
gi|419256214|ref|ZP_13798721.1| alanyl-tRNA synthetase [Escherichia coli DEC10A]
gi|419262511|ref|ZP_13804922.1| alanyl-tRNA synthetase [Escherichia coli DEC10B]
gi|419268712|ref|ZP_13811057.1| alanyl-tRNA synthetase [Escherichia coli DEC10C]
gi|419290698|ref|ZP_13832787.1| alanyl-tRNA synthetase [Escherichia coli DEC11A]
gi|419324255|ref|ZP_13865945.1| alanyl-tRNA synthetase [Escherichia coli DEC12B]
gi|419335748|ref|ZP_13877270.1| alanyl-tRNA synthetase [Escherichia coli DEC12D]
gi|419346356|ref|ZP_13887727.1| alanyl-tRNA synthetase [Escherichia coli DEC13A]
gi|419356223|ref|ZP_13897476.1| alanyl-tRNA synthetase [Escherichia coli DEC13C]
gi|419376650|ref|ZP_13917673.1| alanyl-tRNA synthetase [Escherichia coli DEC14B]
gi|420364513|ref|ZP_14865389.1| alanyl-tRNA synthetase [Shigella sonnei 4822-66]
gi|420392659|ref|ZP_14891907.1| alanyl-tRNA synthetase [Escherichia coli EPEC C342-62]
gi|378022133|gb|EHV84820.1| alanyl-tRNA synthetase [Escherichia coli DEC7C]
gi|378059530|gb|EHW21729.1| alanyl-tRNA synthetase [Escherichia coli DEC8D]
gi|378072071|gb|EHW34134.1| alanyl-tRNA synthetase [Escherichia coli DEC9A]
gi|378075878|gb|EHW37892.1| alanyl-tRNA synthetase [Escherichia coli DEC9B]
gi|378082287|gb|EHW44232.1| alanyl-tRNA synthetase [Escherichia coli DEC9C]
gi|378088570|gb|EHW50420.1| alanyl-tRNA synthetase [Escherichia coli DEC9D]
gi|378098901|gb|EHW60626.1| alanyl-tRNA synthetase [Escherichia coli DEC10A]
gi|378104473|gb|EHW66131.1| alanyl-tRNA synthetase [Escherichia coli DEC10B]
gi|378109218|gb|EHW70829.1| alanyl-tRNA synthetase [Escherichia coli DEC10C]
gi|378128472|gb|EHW89854.1| alanyl-tRNA synthetase [Escherichia coli DEC11A]
gi|378163470|gb|EHX24422.1| alanyl-tRNA synthetase [Escherichia coli DEC12B]
gi|378180624|gb|EHX41305.1| alanyl-tRNA synthetase [Escherichia coli DEC12D]
gi|378184303|gb|EHX44939.1| alanyl-tRNA synthetase [Escherichia coli DEC13A]
gi|378199096|gb|EHX59564.1| alanyl-tRNA synthetase [Escherichia coli DEC13C]
gi|378218197|gb|EHX78469.1| alanyl-tRNA synthetase [Escherichia coli DEC14B]
gi|386165182|gb|EIH31702.1| alanine--tRNA ligase [Escherichia coli 96.0497]
gi|386203122|gb|EII02113.1| alanine--tRNA ligase [Escherichia coli 96.154]
gi|386208289|gb|EII12794.1| alanine--tRNA ligase [Escherichia coli 5.0959]
gi|386218403|gb|EII34886.1| alanine--tRNA ligase [Escherichia coli 4.0967]
gi|386227960|gb|EII55316.1| alanine--tRNA ligase [Escherichia coli 3.3884]
gi|386260045|gb|EIJ15519.1| alanine--tRNA ligase [Escherichia coli 900105 (10e)]
gi|391293155|gb|EIQ51444.1| alanyl-tRNA synthetase [Shigella sonnei 4822-66]
gi|391311258|gb|EIQ68894.1| alanyl-tRNA synthetase [Escherichia coli EPEC C342-62]
gi|397898085|gb|EJL14479.1| alanyl-tRNA synthetase [Shigella sonnei str. Moseley]
Length = 839
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 443 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 479
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 480 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 537
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 538 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 571
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 343 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 401
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 402 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 461
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 462 YAESGGQVGDK 472
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 431 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 480
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 443 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 479
>gi|418041442|ref|ZP_12679667.1| alanyl-tRNA synthetase [Escherichia coli W26]
gi|383475778|gb|EID67732.1| alanyl-tRNA synthetase [Escherichia coli W26]
Length = 808
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 412 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 448
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 449 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 506
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 507 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 540
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 312 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 370
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 371 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 430
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 431 YAESGGQVGDK 441
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 400 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 449
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 412 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 448
>gi|301026644|ref|ZP_07190061.1| alanyl-tRNA synthetase [Escherichia coli MS 196-1]
gi|417272456|ref|ZP_12059805.1| alanine--tRNA ligase [Escherichia coli 2.4168]
gi|417277189|ref|ZP_12064514.1| alanine--tRNA ligase [Escherichia coli 3.2303]
gi|421777305|ref|ZP_16213902.1| alanyl-tRNA synthetase [Escherichia coli AD30]
gi|299879631|gb|EFI87842.1| alanyl-tRNA synthetase [Escherichia coli MS 196-1]
gi|386236156|gb|EII68132.1| alanine--tRNA ligase [Escherichia coli 2.4168]
gi|386240063|gb|EII76988.1| alanine--tRNA ligase [Escherichia coli 3.2303]
gi|408457605|gb|EKJ81399.1| alanyl-tRNA synthetase [Escherichia coli AD30]
Length = 839
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 443 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 479
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 480 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 537
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 538 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 571
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 343 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 401
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 402 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 461
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 462 YAESGGQVGDK 472
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 431 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 480
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 443 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 479
>gi|432393137|ref|ZP_19635966.1| alanyl-tRNA synthetase [Escherichia coli KTE21]
gi|430917400|gb|ELC38447.1| alanyl-tRNA synthetase [Escherichia coli KTE21]
Length = 876
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|110642817|ref|YP_670547.1| alanyl-tRNA synthetase [Escherichia coli 536]
gi|432471983|ref|ZP_19714024.1| alanyl-tRNA synthetase [Escherichia coli KTE206]
gi|432714389|ref|ZP_19949423.1| alanyl-tRNA synthetase [Escherichia coli KTE8]
gi|433078829|ref|ZP_20265354.1| alanyl-tRNA synthetase [Escherichia coli KTE131]
gi|123147797|sp|Q0TEI3.1|SYA_ECOL5 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|110344409|gb|ABG70646.1| alanyl-tRNA synthetase [Escherichia coli 536]
gi|430996930|gb|ELD13200.1| alanyl-tRNA synthetase [Escherichia coli KTE206]
gi|431255106|gb|ELF48362.1| alanyl-tRNA synthetase [Escherichia coli KTE8]
gi|431595464|gb|ELI65461.1| alanyl-tRNA synthetase [Escherichia coli KTE131]
Length = 876
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|432863774|ref|ZP_20087615.1| alanyl-tRNA synthetase [Escherichia coli KTE146]
gi|431403639|gb|ELG86910.1| alanyl-tRNA synthetase [Escherichia coli KTE146]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|419019622|ref|ZP_13566927.1| alanyl-tRNA synthetase [Escherichia coli DEC1E]
gi|377859313|gb|EHU24147.1| alanyl-tRNA synthetase [Escherichia coli DEC1E]
Length = 840
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 444 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 480
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 481 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 538
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 539 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 572
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 344 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 402
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 403 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 462
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 463 YAESGGQVGDK 473
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 432 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 481
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 444 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 480
>gi|432617857|ref|ZP_19853967.1| alanyl-tRNA synthetase [Escherichia coli KTE75]
gi|431152749|gb|ELE53675.1| alanyl-tRNA synthetase [Escherichia coli KTE75]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G + ++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVNSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|417237380|ref|ZP_12035347.1| alanine--tRNA ligase [Escherichia coli 9.0111]
gi|419187464|ref|ZP_13730974.1| alanyl-tRNA synthetase [Escherichia coli DEC7D]
gi|419250412|ref|ZP_13792985.1| alanyl-tRNA synthetase [Escherichia coli DEC9E]
gi|419273933|ref|ZP_13816225.1| alanyl-tRNA synthetase [Escherichia coli DEC10D]
gi|419285363|ref|ZP_13827532.1| alanyl-tRNA synthetase [Escherichia coli DEC10F]
gi|419807390|ref|ZP_14332449.1| alanyl-tRNA synthetase [Escherichia coli AI27]
gi|378027382|gb|EHV90011.1| alanyl-tRNA synthetase [Escherichia coli DEC7D]
gi|378092829|gb|EHW54648.1| alanyl-tRNA synthetase [Escherichia coli DEC9E]
gi|378115153|gb|EHW76700.1| alanyl-tRNA synthetase [Escherichia coli DEC10D]
gi|378129393|gb|EHW90764.1| alanyl-tRNA synthetase [Escherichia coli DEC10F]
gi|384469620|gb|EIE53772.1| alanyl-tRNA synthetase [Escherichia coli AI27]
gi|386214465|gb|EII24888.1| alanine--tRNA ligase [Escherichia coli 9.0111]
Length = 840
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 444 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 480
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 481 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 538
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 539 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 572
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 344 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 402
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 403 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 462
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 463 YAESGGQVGDK 473
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 432 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 481
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 444 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 480
>gi|416274637|ref|ZP_11643756.1| Alanyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
gi|320173452|gb|EFW48651.1| Alanyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD ++ A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|419939838|ref|ZP_14456622.1| alanyl-tRNA synthetase [Escherichia coli 75]
gi|388406212|gb|EIL66619.1| alanyl-tRNA synthetase [Escherichia coli 75]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|218547790|ref|YP_002381581.1| alanyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
gi|218355331|emb|CAQ87938.1| alanyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RKVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|432482004|ref|ZP_19723958.1| alanyl-tRNA synthetase [Escherichia coli KTE210]
gi|431005675|gb|ELD20689.1| alanyl-tRNA synthetase [Escherichia coli KTE210]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|419149743|ref|ZP_13694395.1| alanyl-tRNA synthetase [Escherichia coli DEC6B]
gi|377991395|gb|EHV54546.1| alanyl-tRNA synthetase [Escherichia coli DEC6B]
Length = 840
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 444 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 480
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 481 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 538
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 539 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 572
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 344 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 402
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 403 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 462
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 463 YAESGGQVGDK 473
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 432 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 481
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 444 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 480
>gi|334125326|ref|ZP_08499315.1| alanine--tRNA ligase [Enterobacter hormaechei ATCC 49162]
gi|333386789|gb|EGK57993.1| alanine--tRNA ligase [Enterobacter hormaechei ATCC 49162]
Length = 875
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 76/134 (56%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDS+S+G EA ++LDK+ FYAE GGQ+ D+G + G FS V+ + KY
Sbjct: 480 VDSISAGQEAVVILDKTPFYAESGGQVGDKGELKGNG--------FSFTVS-DTQKYGQA 530
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I Q L +S +L+VG+ ++ ++D ARR I NH+ATH+++ ALR
Sbjct: 531 IGHQGKL---------------VSGSLKVGEGVQANVDEARRARIRLNHSATHLMHAALR 575
Query: 446 FVLGPEADQKGSLV 459
VLG QKGSLV
Sbjct: 576 DVLGTHVAQKGSLV 589
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 13/129 (10%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
+AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +
Sbjct: 382 LAKL-KGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESS 440
Query: 65 G----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQ 112
G ++++ EF G LA+ +V + + ++I+ G V +
Sbjct: 441 GFGADYNAMIRVDSASEFKGYEELALTSNVTALFVDGKAVDSISAGQEAVVILDKTPFYA 500
Query: 113 SHSGSINDE 121
G + D+
Sbjct: 501 ESGGQVGDK 509
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 277 TVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAG 336
V L + + VDS+S+G EA ++LDK+ FYAE GGQ+ D+G + F +VS + G
Sbjct: 469 NVTALFVDGKAVDSISAGQEAVVILDKTPFYAESGGQVGDKGELKGNGFSFTVSDTQKYG 528
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VDS+S+G EA ++LDK+ FYAE GGQ+ D+G + G
Sbjct: 480 VDSISAGQEAVVILDKTPFYAESGGQVGDKGELKG 514
>gi|91212055|ref|YP_542041.1| alanyl-tRNA synthetase [Escherichia coli UTI89]
gi|117624928|ref|YP_853916.1| alanyl-tRNA synthetase [Escherichia coli APEC O1]
gi|218559685|ref|YP_002392598.1| alanyl-tRNA synthetase [Escherichia coli S88]
gi|237706683|ref|ZP_04537164.1| alanyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
gi|386600686|ref|YP_006102192.1| penicillin-binding protein 7 [Escherichia coli IHE3034]
gi|386603251|ref|YP_006109551.1| alanyl-tRNA synthetase [Escherichia coli UM146]
gi|417086132|ref|ZP_11953368.1| alanyl-tRNA synthetase [Escherichia coli cloneA_i1]
gi|419944729|ref|ZP_14461203.1| alanyl-tRNA synthetase [Escherichia coli HM605]
gi|422750285|ref|ZP_16804196.1| alanyl-tRNA synthetase [Escherichia coli H252]
gi|422754539|ref|ZP_16808365.1| alanyl-tRNA synthetase [Escherichia coli H263]
gi|422840683|ref|ZP_16888653.1| alanyl-tRNA synthetase [Escherichia coli H397]
gi|432358997|ref|ZP_19602215.1| alanyl-tRNA synthetase [Escherichia coli KTE4]
gi|432363861|ref|ZP_19607019.1| alanyl-tRNA synthetase [Escherichia coli KTE5]
gi|432574812|ref|ZP_19811289.1| alanyl-tRNA synthetase [Escherichia coli KTE55]
gi|432588996|ref|ZP_19825350.1| alanyl-tRNA synthetase [Escherichia coli KTE58]
gi|432755548|ref|ZP_19990094.1| alanyl-tRNA synthetase [Escherichia coli KTE22]
gi|432779628|ref|ZP_20013850.1| alanyl-tRNA synthetase [Escherichia coli KTE59]
gi|432788620|ref|ZP_20022748.1| alanyl-tRNA synthetase [Escherichia coli KTE65]
gi|432822056|ref|ZP_20055746.1| alanyl-tRNA synthetase [Escherichia coli KTE118]
gi|432823566|ref|ZP_20057236.1| alanyl-tRNA synthetase [Escherichia coli KTE123]
gi|433006148|ref|ZP_20194574.1| alanyl-tRNA synthetase [Escherichia coli KTE227]
gi|433008816|ref|ZP_20197230.1| alanyl-tRNA synthetase [Escherichia coli KTE229]
gi|433154766|ref|ZP_20339702.1| alanyl-tRNA synthetase [Escherichia coli KTE176]
gi|433164651|ref|ZP_20349384.1| alanyl-tRNA synthetase [Escherichia coli KTE179]
gi|122422735|sp|Q1R804.1|SYA_ECOUT RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830084|sp|A1AEN7.1|SYA_ECOK1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|91073629|gb|ABE08510.1| alanyl-tRNA synthetase [Escherichia coli UTI89]
gi|115514052|gb|ABJ02127.1| alanyl-tRNA synthetase [Escherichia coli APEC O1]
gi|218366454|emb|CAR04206.1| alanyl-tRNA synthetase [Escherichia coli S88]
gi|226899723|gb|EEH85982.1| alanyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
gi|294489971|gb|ADE88727.1| penicillin-binding protein 7 [Escherichia coli IHE3034]
gi|307625735|gb|ADN70039.1| alanyl-tRNA synthetase [Escherichia coli UM146]
gi|323951085|gb|EGB46961.1| alanyl-tRNA synthetase [Escherichia coli H252]
gi|323957093|gb|EGB52818.1| alanyl-tRNA synthetase [Escherichia coli H263]
gi|355350657|gb|EHF99853.1| alanyl-tRNA synthetase [Escherichia coli cloneA_i1]
gi|371605694|gb|EHN94302.1| alanyl-tRNA synthetase [Escherichia coli H397]
gi|388417871|gb|EIL77698.1| alanyl-tRNA synthetase [Escherichia coli HM605]
gi|430875518|gb|ELB99053.1| alanyl-tRNA synthetase [Escherichia coli KTE4]
gi|430884317|gb|ELC07257.1| alanyl-tRNA synthetase [Escherichia coli KTE5]
gi|431106648|gb|ELE10847.1| alanyl-tRNA synthetase [Escherichia coli KTE55]
gi|431119019|gb|ELE22034.1| alanyl-tRNA synthetase [Escherichia coli KTE58]
gi|431300852|gb|ELF90399.1| alanyl-tRNA synthetase [Escherichia coli KTE22]
gi|431325543|gb|ELG12926.1| alanyl-tRNA synthetase [Escherichia coli KTE59]
gi|431335620|gb|ELG22749.1| alanyl-tRNA synthetase [Escherichia coli KTE65]
gi|431367125|gb|ELG53611.1| alanyl-tRNA synthetase [Escherichia coli KTE118]
gi|431378091|gb|ELG63082.1| alanyl-tRNA synthetase [Escherichia coli KTE123]
gi|431512516|gb|ELH90607.1| alanyl-tRNA synthetase [Escherichia coli KTE227]
gi|431522555|gb|ELH99787.1| alanyl-tRNA synthetase [Escherichia coli KTE229]
gi|431672792|gb|ELJ39026.1| alanyl-tRNA synthetase [Escherichia coli KTE176]
gi|431685482|gb|ELJ51052.1| alanyl-tRNA synthetase [Escherichia coli KTE179]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD ++ A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|422331684|ref|ZP_16412699.1| alanyl-tRNA synthetase [Escherichia coli 4_1_47FAA]
gi|373247277|gb|EHP66723.1| alanyl-tRNA synthetase [Escherichia coli 4_1_47FAA]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGTN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGTNF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGTN 516
>gi|157162143|ref|YP_001459461.1| alanyl-tRNA synthetase [Escherichia coli HS]
gi|218690819|ref|YP_002399031.1| alanyl-tRNA synthetase [Escherichia coli ED1a]
gi|227888232|ref|ZP_04006037.1| alanyl-tRNA synthetase [Escherichia coli 83972]
gi|331658802|ref|ZP_08359744.1| alanine--tRNA ligase [Escherichia coli TA206]
gi|386630430|ref|YP_006150150.1| alanyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
gi|386635350|ref|YP_006155069.1| alanyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
gi|386640179|ref|YP_006106977.1| alanyl-tRNA synthetase [Escherichia coli ABU 83972]
gi|419920193|ref|ZP_14438319.1| alanyl-tRNA synthetase [Escherichia coli KD2]
gi|432366153|ref|ZP_19609272.1| alanyl-tRNA synthetase [Escherichia coli KTE10]
gi|432412821|ref|ZP_19655481.1| alanyl-tRNA synthetase [Escherichia coli KTE39]
gi|432432896|ref|ZP_19675321.1| alanyl-tRNA synthetase [Escherichia coli KTE187]
gi|432437378|ref|ZP_19679765.1| alanyl-tRNA synthetase [Escherichia coli KTE188]
gi|432457719|ref|ZP_19699899.1| alanyl-tRNA synthetase [Escherichia coli KTE201]
gi|432486447|ref|ZP_19728360.1| alanyl-tRNA synthetase [Escherichia coli KTE212]
gi|432496714|ref|ZP_19738509.1| alanyl-tRNA synthetase [Escherichia coli KTE214]
gi|432505458|ref|ZP_19747179.1| alanyl-tRNA synthetase [Escherichia coli KTE220]
gi|432524852|ref|ZP_19761977.1| alanyl-tRNA synthetase [Escherichia coli KTE230]
gi|432527460|ref|ZP_19764548.1| alanyl-tRNA synthetase [Escherichia coli KTE233]
gi|432554714|ref|ZP_19791433.1| alanyl-tRNA synthetase [Escherichia coli KTE47]
gi|432569740|ref|ZP_19806249.1| alanyl-tRNA synthetase [Escherichia coli KTE53]
gi|432582227|ref|ZP_19818641.1| alanyl-tRNA synthetase [Escherichia coli KTE57]
gi|432593873|ref|ZP_19830186.1| alanyl-tRNA synthetase [Escherichia coli KTE60]
gi|432608540|ref|ZP_19844723.1| alanyl-tRNA synthetase [Escherichia coli KTE67]
gi|432652181|ref|ZP_19887932.1| alanyl-tRNA synthetase [Escherichia coli KTE87]
gi|432671768|ref|ZP_19907295.1| alanyl-tRNA synthetase [Escherichia coli KTE119]
gi|432733438|ref|ZP_19968264.1| alanyl-tRNA synthetase [Escherichia coli KTE45]
gi|432751108|ref|ZP_19985708.1| alanyl-tRNA synthetase [Escherichia coli KTE29]
gi|432760524|ref|ZP_19995015.1| alanyl-tRNA synthetase [Escherichia coli KTE46]
gi|432784571|ref|ZP_20018749.1| alanyl-tRNA synthetase [Escherichia coli KTE63]
gi|432845673|ref|ZP_20078407.1| alanyl-tRNA synthetase [Escherichia coli KTE141]
gi|432853822|ref|ZP_20082367.1| alanyl-tRNA synthetase [Escherichia coli KTE144]
gi|432899801|ref|ZP_20110311.1| alanyl-tRNA synthetase [Escherichia coli KTE192]
gi|432974808|ref|ZP_20163643.1| alanyl-tRNA synthetase [Escherichia coli KTE209]
gi|432996363|ref|ZP_20184947.1| alanyl-tRNA synthetase [Escherichia coli KTE218]
gi|433000934|ref|ZP_20189456.1| alanyl-tRNA synthetase [Escherichia coli KTE223]
gi|433029584|ref|ZP_20217438.1| alanyl-tRNA synthetase [Escherichia coli KTE109]
gi|433059142|ref|ZP_20246182.1| alanyl-tRNA synthetase [Escherichia coli KTE124]
gi|433088341|ref|ZP_20274708.1| alanyl-tRNA synthetase [Escherichia coli KTE137]
gi|433116546|ref|ZP_20302333.1| alanyl-tRNA synthetase [Escherichia coli KTE153]
gi|433121223|ref|ZP_20306889.1| alanyl-tRNA synthetase [Escherichia coli KTE157]
gi|433126216|ref|ZP_20311769.1| alanyl-tRNA synthetase [Escherichia coli KTE160]
gi|433140284|ref|ZP_20325535.1| alanyl-tRNA synthetase [Escherichia coli KTE167]
gi|433150203|ref|ZP_20335218.1| alanyl-tRNA synthetase [Escherichia coli KTE174]
gi|433174570|ref|ZP_20359087.1| alanyl-tRNA synthetase [Escherichia coli KTE232]
gi|433208780|ref|ZP_20392452.1| alanyl-tRNA synthetase [Escherichia coli KTE97]
gi|433213564|ref|ZP_20397152.1| alanyl-tRNA synthetase [Escherichia coli KTE99]
gi|442603568|ref|ZP_21018439.1| Alanyl-tRNA synthetase [Escherichia coli Nissle 1917]
gi|205830083|sp|A8A3H4.1|SYA_ECOHS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|157067823|gb|ABV07078.1| alanyl-tRNA synthetase [Escherichia coli HS]
gi|218428383|emb|CAR09311.2| alanyl-tRNA synthetase [Escherichia coli ED1a]
gi|227834501|gb|EEJ44967.1| alanyl-tRNA synthetase [Escherichia coli 83972]
gi|307554671|gb|ADN47446.1| alanyl-tRNA synthetase [Escherichia coli ABU 83972]
gi|331053384|gb|EGI25413.1| alanine--tRNA ligase [Escherichia coli TA206]
gi|355421329|gb|AER85526.1| alanyl-tRNA synthetase [Escherichia coli str. 'clone D i2']
gi|355426249|gb|AER90445.1| alanyl-tRNA synthetase [Escherichia coli str. 'clone D i14']
gi|388385430|gb|EIL47113.1| alanyl-tRNA synthetase [Escherichia coli KD2]
gi|430892424|gb|ELC14915.1| alanyl-tRNA synthetase [Escherichia coli KTE10]
gi|430934281|gb|ELC54648.1| alanyl-tRNA synthetase [Escherichia coli KTE39]
gi|430951078|gb|ELC70298.1| alanyl-tRNA synthetase [Escherichia coli KTE187]
gi|430961551|gb|ELC79558.1| alanyl-tRNA synthetase [Escherichia coli KTE188]
gi|430981004|gb|ELC97744.1| alanyl-tRNA synthetase [Escherichia coli KTE201]
gi|431014970|gb|ELD28534.1| alanyl-tRNA synthetase [Escherichia coli KTE212]
gi|431022407|gb|ELD35668.1| alanyl-tRNA synthetase [Escherichia coli KTE214]
gi|431036974|gb|ELD47962.1| alanyl-tRNA synthetase [Escherichia coli KTE220]
gi|431050526|gb|ELD60271.1| alanyl-tRNA synthetase [Escherichia coli KTE230]
gi|431062276|gb|ELD71549.1| alanyl-tRNA synthetase [Escherichia coli KTE233]
gi|431082065|gb|ELD88379.1| alanyl-tRNA synthetase [Escherichia coli KTE47]
gi|431098832|gb|ELE04138.1| alanyl-tRNA synthetase [Escherichia coli KTE53]
gi|431122509|gb|ELE25378.1| alanyl-tRNA synthetase [Escherichia coli KTE57]
gi|431126275|gb|ELE28622.1| alanyl-tRNA synthetase [Escherichia coli KTE60]
gi|431136619|gb|ELE38475.1| alanyl-tRNA synthetase [Escherichia coli KTE67]
gi|431189281|gb|ELE88704.1| alanyl-tRNA synthetase [Escherichia coli KTE87]
gi|431209447|gb|ELF07554.1| alanyl-tRNA synthetase [Escherichia coli KTE119]
gi|431273204|gb|ELF64290.1| alanyl-tRNA synthetase [Escherichia coli KTE45]
gi|431295602|gb|ELF85339.1| alanyl-tRNA synthetase [Escherichia coli KTE29]
gi|431306764|gb|ELF95069.1| alanyl-tRNA synthetase [Escherichia coli KTE46]
gi|431327728|gb|ELG15048.1| alanyl-tRNA synthetase [Escherichia coli KTE63]
gi|431393849|gb|ELG77395.1| alanyl-tRNA synthetase [Escherichia coli KTE141]
gi|431398237|gb|ELG81657.1| alanyl-tRNA synthetase [Escherichia coli KTE144]
gi|431424941|gb|ELH07016.1| alanyl-tRNA synthetase [Escherichia coli KTE192]
gi|431486874|gb|ELH66519.1| alanyl-tRNA synthetase [Escherichia coli KTE209]
gi|431503907|gb|ELH82639.1| alanyl-tRNA synthetase [Escherichia coli KTE218]
gi|431507444|gb|ELH85729.1| alanyl-tRNA synthetase [Escherichia coli KTE223]
gi|431542133|gb|ELI17372.1| alanyl-tRNA synthetase [Escherichia coli KTE109]
gi|431567784|gb|ELI40776.1| alanyl-tRNA synthetase [Escherichia coli KTE124]
gi|431603357|gb|ELI72782.1| alanyl-tRNA synthetase [Escherichia coli KTE137]
gi|431632562|gb|ELJ00849.1| alanyl-tRNA synthetase [Escherichia coli KTE153]
gi|431641056|gb|ELJ08800.1| alanyl-tRNA synthetase [Escherichia coli KTE157]
gi|431642967|gb|ELJ10671.1| alanyl-tRNA synthetase [Escherichia coli KTE160]
gi|431658631|gb|ELJ25542.1| alanyl-tRNA synthetase [Escherichia coli KTE167]
gi|431669435|gb|ELJ35858.1| alanyl-tRNA synthetase [Escherichia coli KTE174]
gi|431690632|gb|ELJ56108.1| alanyl-tRNA synthetase [Escherichia coli KTE232]
gi|431729228|gb|ELJ92863.1| alanyl-tRNA synthetase [Escherichia coli KTE97]
gi|431733477|gb|ELJ96912.1| alanyl-tRNA synthetase [Escherichia coli KTE99]
gi|441715613|emb|CCQ04416.1| Alanyl-tRNA synthetase [Escherichia coli Nissle 1917]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|420381728|ref|ZP_14881168.1| alanyl-tRNA synthetase [Shigella dysenteriae 225-75]
gi|391299235|gb|EIQ57199.1| alanyl-tRNA synthetase [Shigella dysenteriae 225-75]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD ++ A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|417282120|ref|ZP_12069420.1| alanine--tRNA ligase [Escherichia coli 3003]
gi|417284969|ref|ZP_12072260.1| alanine--tRNA ligase [Escherichia coli TW07793]
gi|419701495|ref|ZP_14229094.1| alanyl-tRNA synthetase [Escherichia coli SCI-07]
gi|419915901|ref|ZP_14434233.1| alanyl-tRNA synthetase [Escherichia coli KD1]
gi|422970163|ref|ZP_16973956.1| alanyl-tRNA synthetase [Escherichia coli TA124]
gi|371600541|gb|EHN89313.1| alanyl-tRNA synthetase [Escherichia coli TA124]
gi|380346957|gb|EIA35246.1| alanyl-tRNA synthetase [Escherichia coli SCI-07]
gi|386246449|gb|EII88179.1| alanine--tRNA ligase [Escherichia coli 3003]
gi|386250210|gb|EII96377.1| alanine--tRNA ligase [Escherichia coli TW07793]
gi|388382634|gb|EIL44484.1| alanyl-tRNA synthetase [Escherichia coli KD1]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD ++ A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + S +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|407470556|ref|YP_006783001.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407480782|ref|YP_006777931.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2011C-3493]
gi|410481348|ref|YP_006768894.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|417806210|ref|ZP_12453156.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
gi|417833962|ref|ZP_12480409.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 01-09591]
gi|417866755|ref|ZP_12511795.1| alaS [Escherichia coli O104:H4 str. C227-11]
gi|422988787|ref|ZP_16979560.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. C227-11]
gi|422995679|ref|ZP_16986443.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. C236-11]
gi|423000827|ref|ZP_16991581.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 09-7901]
gi|423004496|ref|ZP_16995242.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 04-8351]
gi|423010996|ref|ZP_17001730.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-3677]
gi|423020224|ref|ZP_17010933.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4404]
gi|423025390|ref|ZP_17016087.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4522]
gi|423031211|ref|ZP_17021898.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4623]
gi|423039036|ref|ZP_17029710.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423044156|ref|ZP_17034823.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423045884|ref|ZP_17036544.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423054423|ref|ZP_17043230.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423061398|ref|ZP_17050194.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C5]
gi|429720253|ref|ZP_19255180.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429772153|ref|ZP_19304173.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02030]
gi|429777098|ref|ZP_19309073.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429785825|ref|ZP_19317720.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02092]
gi|429791715|ref|ZP_19323569.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02093]
gi|429792563|ref|ZP_19324412.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02281]
gi|429799139|ref|ZP_19330937.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02318]
gi|429802756|ref|ZP_19334516.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02913]
gi|429812552|ref|ZP_19344235.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03439]
gi|429813100|ref|ZP_19344779.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-04080]
gi|429818307|ref|ZP_19349942.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03943]
gi|429904659|ref|ZP_19370638.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429908797|ref|ZP_19374761.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429914669|ref|ZP_19380616.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429919699|ref|ZP_19385630.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429925519|ref|ZP_19391432.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429929455|ref|ZP_19395357.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429935994|ref|ZP_19401880.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429941674|ref|ZP_19407548.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429944355|ref|ZP_19410217.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429951913|ref|ZP_19417759.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429955262|ref|ZP_19421094.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0466]
gi|340733606|gb|EGR62737.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 01-09591]
gi|340739505|gb|EGR73740.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. LB226692]
gi|341920044|gb|EGT69653.1| alaS [Escherichia coli O104:H4 str. C227-11]
gi|354862514|gb|EHF22952.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. C236-11]
gi|354867798|gb|EHF28220.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. C227-11]
gi|354868196|gb|EHF28614.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 04-8351]
gi|354873798|gb|EHF34175.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 09-7901]
gi|354880479|gb|EHF40815.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-3677]
gi|354888313|gb|EHF48572.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4404]
gi|354892221|gb|EHF52430.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4522]
gi|354893427|gb|EHF53630.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354896230|gb|EHF56401.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4623]
gi|354897607|gb|EHF57764.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354911459|gb|EHF71463.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354914583|gb|EHF74566.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354916365|gb|EHF76337.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-4632 C4]
gi|406776510|gb|AFS55934.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407053079|gb|AFS73130.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2011C-3493]
gi|407066591|gb|AFS87638.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 2009EL-2071]
gi|429347355|gb|EKY84128.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02092]
gi|429358391|gb|EKY95060.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02030]
gi|429360447|gb|EKY97105.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02093]
gi|429361204|gb|EKY97860.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02033-1]
gi|429363815|gb|EKZ00440.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02318]
gi|429375860|gb|EKZ12392.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02281]
gi|429377778|gb|EKZ14293.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03439]
gi|429389423|gb|EKZ25843.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-02913]
gi|429393592|gb|EKZ29983.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-03943]
gi|429403261|gb|EKZ39545.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. 11-04080]
gi|429405748|gb|EKZ42012.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9990]
gi|429408629|gb|EKZ44864.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9450]
gi|429413065|gb|EKZ49254.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4987]
gi|429415794|gb|EKZ51952.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4984]
gi|429419475|gb|EKZ55610.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4986]
gi|429430954|gb|EKZ67004.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-4988]
gi|429434990|gb|EKZ71010.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5603]
gi|429437216|gb|EKZ73223.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-6006]
gi|429442333|gb|EKZ78290.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-5604]
gi|429446483|gb|EKZ82411.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0465]
gi|429450688|gb|EKZ86581.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec11-9941]
gi|429456161|gb|EKZ92007.1| alanyl-tRNA synthetase [Escherichia coli O104:H4 str. Ec12-0466]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|422807902|ref|ZP_16856330.1| alanyl-tRNA synthetase [Escherichia fergusonii B253]
gi|324111325|gb|EGC05307.1| alanyl-tRNA synthetase [Escherichia fergusonii B253]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL ++ V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELSGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|416346980|ref|ZP_11680024.1| Alanyl-tRNA synthetase [Escherichia coli EC4100B]
gi|417132415|ref|ZP_11977200.1| alanine--tRNA ligase [Escherichia coli 5.0588]
gi|417150429|ref|ZP_11990168.1| alanine--tRNA ligase [Escherichia coli 1.2264]
gi|417166619|ref|ZP_11999975.1| alanine--tRNA ligase [Escherichia coli 99.0741]
gi|417176341|ref|ZP_12006137.1| alanine--tRNA ligase [Escherichia coli 3.2608]
gi|417186237|ref|ZP_12011380.1| alanine--tRNA ligase [Escherichia coli 93.0624]
gi|417200161|ref|ZP_12017398.1| alanine--tRNA ligase [Escherichia coli 4.0522]
gi|417211451|ref|ZP_12021750.1| alanine--tRNA ligase [Escherichia coli JB1-95]
gi|419204769|ref|ZP_13747945.1| alanyl-tRNA synthetase [Escherichia coli DEC8B]
gi|419211005|ref|ZP_13754078.1| alanyl-tRNA synthetase [Escherichia coli DEC8C]
gi|419222686|ref|ZP_13765603.1| alanyl-tRNA synthetase [Escherichia coli DEC8E]
gi|419279189|ref|ZP_13821433.1| alanyl-tRNA synthetase [Escherichia coli DEC10E]
gi|419295983|ref|ZP_13838026.1| alanyl-tRNA synthetase [Escherichia coli DEC11B]
gi|419350818|ref|ZP_13892151.1| alanyl-tRNA synthetase [Escherichia coli DEC13B]
gi|419361294|ref|ZP_13902507.1| alanyl-tRNA synthetase [Escherichia coli DEC13D]
gi|419366414|ref|ZP_13907570.1| alanyl-tRNA synthetase [Escherichia coli DEC13E]
gi|419381964|ref|ZP_13922910.1| alanyl-tRNA synthetase [Escherichia coli DEC14C]
gi|320197699|gb|EFW72308.1| Alanyl-tRNA synthetase [Escherichia coli EC4100B]
gi|378046917|gb|EHW09290.1| alanyl-tRNA synthetase [Escherichia coli DEC8B]
gi|378051550|gb|EHW13866.1| alanyl-tRNA synthetase [Escherichia coli DEC8C]
gi|378064131|gb|EHW26292.1| alanyl-tRNA synthetase [Escherichia coli DEC8E]
gi|378126468|gb|EHW87862.1| alanyl-tRNA synthetase [Escherichia coli DEC10E]
gi|378140708|gb|EHX01931.1| alanyl-tRNA synthetase [Escherichia coli DEC11B]
gi|378198405|gb|EHX58875.1| alanyl-tRNA synthetase [Escherichia coli DEC13B]
gi|378201497|gb|EHX61940.1| alanyl-tRNA synthetase [Escherichia coli DEC13D]
gi|378211405|gb|EHX71743.1| alanyl-tRNA synthetase [Escherichia coli DEC13E]
gi|378226460|gb|EHX86646.1| alanyl-tRNA synthetase [Escherichia coli DEC14C]
gi|386150269|gb|EIH01558.1| alanine--tRNA ligase [Escherichia coli 5.0588]
gi|386159923|gb|EIH21734.1| alanine--tRNA ligase [Escherichia coli 1.2264]
gi|386171776|gb|EIH43815.1| alanine--tRNA ligase [Escherichia coli 99.0741]
gi|386179033|gb|EIH56512.1| alanine--tRNA ligase [Escherichia coli 3.2608]
gi|386182229|gb|EIH64987.1| alanine--tRNA ligase [Escherichia coli 93.0624]
gi|386187964|gb|EIH76777.1| alanine--tRNA ligase [Escherichia coli 4.0522]
gi|386195025|gb|EIH89261.1| alanine--tRNA ligase [Escherichia coli JB1-95]
Length = 833
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 437 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 473
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 474 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 531
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 532 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 565
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 337 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 395
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 396 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 455
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 456 YAESGGQVGDK 466
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 425 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 474
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 437 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 473
>gi|219847052|ref|YP_002461485.1| alanyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
gi|219541311|gb|ACL23049.1| alanyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
Length = 894
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 70/142 (49%), Gaps = 23/142 (16%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G +++ + S G + I+LD + FYAE GGQ+ D G ++G QIE
Sbjct: 476 GMLADGDAITSAMVGRQVQIVLDTTPFYAESGGQVGDTGVLVGPEGSVQIE--------- 526
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
++ LP + V +S T+ VGD+++ +D RR I NHTAT
Sbjct: 527 -DTRRPLPGLI-------------VHYGRVVSGTIHVGDQVQATVDMVRRADIQRNHTAT 572
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H+L ALR VLG A Q GSLV
Sbjct: 573 HMLQRALRDVLGEHAAQAGSLV 594
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA 52
+++ + GE+ V+PG A+ L DTYGFP+DLTQ + E+GL+VD YE A
Sbjct: 379 VIEQVRTRGET-VIPGTDAFVLKDTYGFPLDLTQKIAAEQGLTVDEAGYEAA 429
>gi|432535030|ref|ZP_19772000.1| alanyl-tRNA synthetase [Escherichia coli KTE234]
gi|431059238|gb|ELD68599.1| alanyl-tRNA synthetase [Escherichia coli KTE234]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|432466839|ref|ZP_19708925.1| alanyl-tRNA synthetase [Escherichia coli KTE205]
gi|433073883|ref|ZP_20260531.1| alanyl-tRNA synthetase [Escherichia coli KTE129]
gi|433184358|ref|ZP_20368600.1| alanyl-tRNA synthetase [Escherichia coli KTE85]
gi|430992636|gb|ELD09005.1| alanyl-tRNA synthetase [Escherichia coli KTE205]
gi|431586494|gb|ELI57886.1| alanyl-tRNA synthetase [Escherichia coli KTE129]
gi|431704459|gb|ELJ69085.1| alanyl-tRNA synthetase [Escherichia coli KTE85]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|386705960|ref|YP_006169807.1| alanyl-tRNA synthetase [Escherichia coli P12b]
gi|383104128|gb|AFG41637.1| Alanyl-tRNA synthetase [Escherichia coli P12b]
Length = 833
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 437 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 473
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 474 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 531
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 532 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 565
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 337 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 395
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 396 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 455
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 456 YAESGGQVGDK 466
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 425 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 474
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 437 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 473
>gi|306812426|ref|ZP_07446624.1| alanyl-tRNA synthetase [Escherichia coli NC101]
gi|416336702|ref|ZP_11673172.1| Alanyl-tRNA synthetase [Escherichia coli WV_060327]
gi|432382394|ref|ZP_19625334.1| alanyl-tRNA synthetase [Escherichia coli KTE15]
gi|432388326|ref|ZP_19631208.1| alanyl-tRNA synthetase [Escherichia coli KTE16]
gi|432514957|ref|ZP_19752178.1| alanyl-tRNA synthetase [Escherichia coli KTE224]
gi|432612675|ref|ZP_19848833.1| alanyl-tRNA synthetase [Escherichia coli KTE72]
gi|432647227|ref|ZP_19883013.1| alanyl-tRNA synthetase [Escherichia coli KTE86]
gi|432656818|ref|ZP_19892519.1| alanyl-tRNA synthetase [Escherichia coli KTE93]
gi|432700086|ref|ZP_19935237.1| alanyl-tRNA synthetase [Escherichia coli KTE169]
gi|432746651|ref|ZP_19981314.1| alanyl-tRNA synthetase [Escherichia coli KTE43]
gi|432906051|ref|ZP_20114779.1| alanyl-tRNA synthetase [Escherichia coli KTE194]
gi|432939131|ref|ZP_20137281.1| alanyl-tRNA synthetase [Escherichia coli KTE183]
gi|432972811|ref|ZP_20161675.1| alanyl-tRNA synthetase [Escherichia coli KTE207]
gi|432986413|ref|ZP_20175131.1| alanyl-tRNA synthetase [Escherichia coli KTE215]
gi|433039657|ref|ZP_20227253.1| alanyl-tRNA synthetase [Escherichia coli KTE113]
gi|433083566|ref|ZP_20270020.1| alanyl-tRNA synthetase [Escherichia coli KTE133]
gi|433102238|ref|ZP_20288315.1| alanyl-tRNA synthetase [Escherichia coli KTE145]
gi|433145255|ref|ZP_20330394.1| alanyl-tRNA synthetase [Escherichia coli KTE168]
gi|433189439|ref|ZP_20373532.1| alanyl-tRNA synthetase [Escherichia coli KTE88]
gi|433199388|ref|ZP_20383281.1| alanyl-tRNA synthetase [Escherichia coli KTE94]
gi|305854464|gb|EFM54902.1| alanyl-tRNA synthetase [Escherichia coli NC101]
gi|320194836|gb|EFW69465.1| Alanyl-tRNA synthetase [Escherichia coli WV_060327]
gi|430904908|gb|ELC26589.1| alanyl-tRNA synthetase [Escherichia coli KTE16]
gi|430906135|gb|ELC27736.1| alanyl-tRNA synthetase [Escherichia coli KTE15]
gi|431040332|gb|ELD50867.1| alanyl-tRNA synthetase [Escherichia coli KTE224]
gi|431146858|gb|ELE48281.1| alanyl-tRNA synthetase [Escherichia coli KTE72]
gi|431178574|gb|ELE78481.1| alanyl-tRNA synthetase [Escherichia coli KTE86]
gi|431189621|gb|ELE89040.1| alanyl-tRNA synthetase [Escherichia coli KTE93]
gi|431242331|gb|ELF36751.1| alanyl-tRNA synthetase [Escherichia coli KTE169]
gi|431290591|gb|ELF81126.1| alanyl-tRNA synthetase [Escherichia coli KTE43]
gi|431430442|gb|ELH12273.1| alanyl-tRNA synthetase [Escherichia coli KTE194]
gi|431462126|gb|ELH42343.1| alanyl-tRNA synthetase [Escherichia coli KTE183]
gi|431480288|gb|ELH60008.1| alanyl-tRNA synthetase [Escherichia coli KTE207]
gi|431498189|gb|ELH77402.1| alanyl-tRNA synthetase [Escherichia coli KTE215]
gi|431550055|gb|ELI24052.1| alanyl-tRNA synthetase [Escherichia coli KTE113]
gi|431600322|gb|ELI69993.1| alanyl-tRNA synthetase [Escherichia coli KTE133]
gi|431617817|gb|ELI86806.1| alanyl-tRNA synthetase [Escherichia coli KTE145]
gi|431660413|gb|ELJ27285.1| alanyl-tRNA synthetase [Escherichia coli KTE168]
gi|431704266|gb|ELJ68894.1| alanyl-tRNA synthetase [Escherichia coli KTE88]
gi|431719689|gb|ELJ83741.1| alanyl-tRNA synthetase [Escherichia coli KTE94]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + S +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|215488016|ref|YP_002330447.1| alanyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
gi|417756934|ref|ZP_12405006.1| alanyl-tRNA synthetase [Escherichia coli DEC2B]
gi|418997993|ref|ZP_13545584.1| alanyl-tRNA synthetase [Escherichia coli DEC1A]
gi|419003253|ref|ZP_13550773.1| alanyl-tRNA synthetase [Escherichia coli DEC1B]
gi|419009121|ref|ZP_13556545.1| alanyl-tRNA synthetase [Escherichia coli DEC1C]
gi|419014603|ref|ZP_13561949.1| alanyl-tRNA synthetase [Escherichia coli DEC1D]
gi|419025475|ref|ZP_13572695.1| alanyl-tRNA synthetase [Escherichia coli DEC2A]
gi|419030173|ref|ZP_13577330.1| alanyl-tRNA synthetase [Escherichia coli DEC2C]
gi|419035787|ref|ZP_13582871.1| alanyl-tRNA synthetase [Escherichia coli DEC2D]
gi|419040862|ref|ZP_13587886.1| alanyl-tRNA synthetase [Escherichia coli DEC2E]
gi|432544295|ref|ZP_19781135.1| alanyl-tRNA synthetase [Escherichia coli KTE236]
gi|432549785|ref|ZP_19786550.1| alanyl-tRNA synthetase [Escherichia coli KTE237]
gi|432622887|ref|ZP_19858913.1| alanyl-tRNA synthetase [Escherichia coli KTE76]
gi|432719802|ref|ZP_19954768.1| alanyl-tRNA synthetase [Escherichia coli KTE9]
gi|432816382|ref|ZP_20050163.1| alanyl-tRNA synthetase [Escherichia coli KTE115]
gi|215266088|emb|CAS10508.1| alanyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
gi|377842476|gb|EHU07530.1| alanyl-tRNA synthetase [Escherichia coli DEC1C]
gi|377842678|gb|EHU07728.1| alanyl-tRNA synthetase [Escherichia coli DEC1A]
gi|377846017|gb|EHU11033.1| alanyl-tRNA synthetase [Escherichia coli DEC1B]
gi|377855848|gb|EHU20712.1| alanyl-tRNA synthetase [Escherichia coli DEC1D]
gi|377861163|gb|EHU25983.1| alanyl-tRNA synthetase [Escherichia coli DEC2A]
gi|377872649|gb|EHU37292.1| alanyl-tRNA synthetase [Escherichia coli DEC2B]
gi|377876425|gb|EHU41030.1| alanyl-tRNA synthetase [Escherichia coli DEC2C]
gi|377878789|gb|EHU43372.1| alanyl-tRNA synthetase [Escherichia coli DEC2D]
gi|377889174|gb|EHU53641.1| alanyl-tRNA synthetase [Escherichia coli DEC2E]
gi|431073230|gb|ELD80881.1| alanyl-tRNA synthetase [Escherichia coli KTE236]
gi|431078953|gb|ELD85932.1| alanyl-tRNA synthetase [Escherichia coli KTE237]
gi|431157915|gb|ELE58537.1| alanyl-tRNA synthetase [Escherichia coli KTE76]
gi|431261305|gb|ELF53344.1| alanyl-tRNA synthetase [Escherichia coli KTE9]
gi|431363262|gb|ELG49831.1| alanyl-tRNA synthetase [Escherichia coli KTE115]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|191171366|ref|ZP_03032915.1| alanyl-tRNA synthetase [Escherichia coli F11]
gi|190908300|gb|EDV67890.1| alanyl-tRNA synthetase [Escherichia coli F11]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|417140187|ref|ZP_11983437.1| alanine--tRNA ligase [Escherichia coli 97.0259]
gi|386156310|gb|EIH12655.1| alanine--tRNA ligase [Escherichia coli 97.0259]
Length = 833
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 437 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 473
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 474 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 531
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 532 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 565
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 337 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 395
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G + ++ EF G HL + V + + +AI G V
Sbjct: 396 ASGFGADYNAMIRVNSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 455
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 456 YAESGGQVGDK 466
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 425 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 474
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 437 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 473
>gi|74313262|ref|YP_311681.1| alanyl-tRNA synthetase [Shigella sonnei Ss046]
gi|157158305|ref|YP_001464004.1| alanyl-tRNA synthetase [Escherichia coli E24377A]
gi|191167095|ref|ZP_03028916.1| alanyl-tRNA synthetase [Escherichia coli B7A]
gi|193065058|ref|ZP_03046133.1| alanyl-tRNA synthetase [Escherichia coli E22]
gi|193069650|ref|ZP_03050602.1| alanyl-tRNA synthetase [Escherichia coli E110019]
gi|194427866|ref|ZP_03060412.1| alanyl-tRNA synthetase [Escherichia coli B171]
gi|209920136|ref|YP_002294220.1| alanyl-tRNA synthetase [Escherichia coli SE11]
gi|218555239|ref|YP_002388152.1| alanyl-tRNA synthetase [Escherichia coli IAI1]
gi|218696288|ref|YP_002403955.1| alanyl-tRNA synthetase [Escherichia coli 55989]
gi|260845339|ref|YP_003223117.1| alanyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
gi|260856802|ref|YP_003230693.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
gi|260869370|ref|YP_003235772.1| alanyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
gi|293449010|ref|ZP_06663431.1| alanyl-tRNA synthetase [Escherichia coli B088]
gi|307314418|ref|ZP_07594023.1| alanyl-tRNA synthetase [Escherichia coli W]
gi|331669429|ref|ZP_08370275.1| alanine--tRNA ligase [Escherichia coli TA271]
gi|332280649|ref|ZP_08393062.1| alanyl-tRNA synthetase [Shigella sp. D9]
gi|378711884|ref|YP_005276777.1| alanyl-tRNA synthetase [Escherichia coli KO11FL]
gi|383179835|ref|YP_005457840.1| alanyl-tRNA synthetase [Shigella sonnei 53G]
gi|386610056|ref|YP_006125542.1| alanyl-tRNA synthetase [Escherichia coli W]
gi|386700397|ref|YP_006164234.1| alanyl-tRNA synthetase [Escherichia coli KO11FL]
gi|386710547|ref|YP_006174268.1| alanyl-tRNA synthetase [Escherichia coli W]
gi|415818369|ref|ZP_11508091.1| alanyl-tRNA synthetase [Escherichia coli OK1180]
gi|418942124|ref|ZP_13495419.1| alanyl-tRNA synthetase [Escherichia coli O157:H43 str. T22]
gi|419387306|ref|ZP_13928180.1| alanyl-tRNA synthetase [Escherichia coli DEC14D]
gi|419862166|ref|ZP_14384783.1| alanyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
gi|419867527|ref|ZP_14389842.1| alanyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
gi|419875139|ref|ZP_14397020.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
gi|419886128|ref|ZP_14406779.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
gi|419887653|ref|ZP_14408222.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9570]
gi|419893005|ref|ZP_14413012.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9574]
gi|419904743|ref|ZP_14423730.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
gi|419907500|ref|ZP_14426323.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
gi|419922450|ref|ZP_14440463.1| alanyl-tRNA synthetase [Escherichia coli 541-15]
gi|419927078|ref|ZP_14444818.1| alanyl-tRNA synthetase [Escherichia coli 541-1]
gi|419948490|ref|ZP_14464786.1| alanyl-tRNA synthetase [Escherichia coli CUMT8]
gi|420090831|ref|ZP_14602593.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9602]
gi|420097685|ref|ZP_14608977.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9634]
gi|420109762|ref|ZP_14619861.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
gi|420115104|ref|ZP_14624681.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
gi|420123401|ref|ZP_14632293.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
gi|420128890|ref|ZP_14637438.1| alanyl-tRNA ligase [Escherichia coli O26:H11 str. CVM10224]
gi|420133449|ref|ZP_14641685.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
gi|422010635|ref|ZP_16357589.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
gi|422760145|ref|ZP_16813905.1| alanyl-tRNA synthetase [Escherichia coli E1167]
gi|422776092|ref|ZP_16829747.1| alanyl-tRNA synthetase [Escherichia coli H120]
gi|422962690|ref|ZP_16972963.1| alanyl-tRNA synthetase [Escherichia coli H494]
gi|423706850|ref|ZP_17681233.1| alanyl-tRNA synthetase [Escherichia coli B799]
gi|424754171|ref|ZP_18182091.1| alanyl-tRNA ligase [Escherichia coli O26:H11 str. CFSAN001629]
gi|424763353|ref|ZP_18190831.1| alanyl-tRNA ligase [Escherichia coli O111:H11 str. CFSAN001630]
gi|424772984|ref|ZP_18200065.1| alanyl-tRNA ligase [Escherichia coli O111:H8 str. CFSAN001632]
gi|427805849|ref|ZP_18972916.1| alanyl-tRNA synthetase [Escherichia coli chi7122]
gi|427810440|ref|ZP_18977505.1| alanyl-tRNA synthetase [Escherichia coli]
gi|432377868|ref|ZP_19620856.1| alanyl-tRNA synthetase [Escherichia coli KTE12]
gi|432766034|ref|ZP_20000456.1| alanyl-tRNA synthetase [Escherichia coli KTE48]
gi|432806846|ref|ZP_20040763.1| alanyl-tRNA synthetase [Escherichia coli KTE91]
gi|432810378|ref|ZP_20044256.1| alanyl-tRNA synthetase [Escherichia coli KTE101]
gi|432828304|ref|ZP_20061925.1| alanyl-tRNA synthetase [Escherichia coli KTE135]
gi|432835624|ref|ZP_20069160.1| alanyl-tRNA synthetase [Escherichia coli KTE136]
gi|432935592|ref|ZP_20134906.1| alanyl-tRNA synthetase [Escherichia coli KTE184]
gi|432968740|ref|ZP_20157653.1| alanyl-tRNA synthetase [Escherichia coli KTE203]
gi|433093037|ref|ZP_20279298.1| alanyl-tRNA synthetase [Escherichia coli KTE138]
gi|433131209|ref|ZP_20316641.1| alanyl-tRNA synthetase [Escherichia coli KTE163]
gi|433135870|ref|ZP_20321208.1| alanyl-tRNA synthetase [Escherichia coli KTE166]
gi|433194715|ref|ZP_20378698.1| alanyl-tRNA synthetase [Escherichia coli KTE90]
gi|443618718|ref|YP_007382574.1| alanyl-tRNA ligase [Escherichia coli APEC O78]
gi|450220620|ref|ZP_21896389.1| alanyl-tRNA ligase [Escherichia coli O08]
gi|123616373|sp|Q3YYG6.1|SYA_SHISS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830081|sp|A7ZQC5.1|SYA_ECO24 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|73856739|gb|AAZ89446.1| alanyl-tRNA synthetase [Shigella sonnei Ss046]
gi|157080335|gb|ABV20043.1| alanyl-tRNA synthetase [Escherichia coli E24377A]
gi|190902877|gb|EDV62605.1| alanyl-tRNA synthetase [Escherichia coli B7A]
gi|192927355|gb|EDV81974.1| alanyl-tRNA synthetase [Escherichia coli E22]
gi|192957013|gb|EDV87464.1| alanyl-tRNA synthetase [Escherichia coli E110019]
gi|194414099|gb|EDX30375.1| alanyl-tRNA synthetase [Escherichia coli B171]
gi|209913395|dbj|BAG78469.1| alanyl-tRNA synthase [Escherichia coli SE11]
gi|218353020|emb|CAU98845.1| alanyl-tRNA synthetase [Escherichia coli 55989]
gi|218362007|emb|CAQ99613.1| alanyl-tRNA synthetase [Escherichia coli IAI1]
gi|257755451|dbj|BAI26953.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
gi|257760486|dbj|BAI31983.1| alanyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
gi|257765726|dbj|BAI37221.1| alanyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
gi|291322100|gb|EFE61529.1| alanyl-tRNA synthetase [Escherichia coli B088]
gi|306905986|gb|EFN36507.1| alanyl-tRNA synthetase [Escherichia coli W]
gi|315061973|gb|ADT76300.1| alanyl-tRNA synthetase [Escherichia coli W]
gi|323180115|gb|EFZ65667.1| alanyl-tRNA synthetase [Escherichia coli OK1180]
gi|323377445|gb|ADX49713.1| alanyl-tRNA synthetase [Escherichia coli KO11FL]
gi|323946425|gb|EGB42453.1| alanyl-tRNA synthetase [Escherichia coli H120]
gi|324119946|gb|EGC13824.1| alanyl-tRNA synthetase [Escherichia coli E1167]
gi|331063097|gb|EGI35010.1| alanine--tRNA ligase [Escherichia coli TA271]
gi|332103001|gb|EGJ06347.1| alanyl-tRNA synthetase [Shigella sp. D9]
gi|371591982|gb|EHN80910.1| alanyl-tRNA synthetase [Escherichia coli H494]
gi|375322569|gb|EHS68319.1| alanyl-tRNA synthetase [Escherichia coli O157:H43 str. T22]
gi|378230302|gb|EHX90424.1| alanyl-tRNA synthetase [Escherichia coli DEC14D]
gi|383391924|gb|AFH16882.1| alanyl-tRNA synthetase [Escherichia coli KO11FL]
gi|383406239|gb|AFH12482.1| alanyl-tRNA synthetase [Escherichia coli W]
gi|385710983|gb|EIG47951.1| alanyl-tRNA synthetase [Escherichia coli B799]
gi|388346107|gb|EIL11850.1| alanyl-tRNA synthetase [Escherichia coli O103:H25 str. CVM9340]
gi|388346600|gb|EIL12310.1| alanyl-tRNA synthetase [Escherichia coli O103:H2 str. CVM9450]
gi|388347066|gb|EIL12763.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9545]
gi|388349717|gb|EIL15185.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9534]
gi|388362338|gb|EIL26361.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9570]
gi|388366862|gb|EIL30573.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9942]
gi|388369166|gb|EIL32786.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9574]
gi|388377045|gb|EIL39893.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10026]
gi|388396139|gb|EIL57267.1| alanyl-tRNA synthetase [Escherichia coli 541-15]
gi|388408278|gb|EIL68631.1| alanyl-tRNA synthetase [Escherichia coli 541-1]
gi|388421264|gb|EIL80882.1| alanyl-tRNA synthetase [Escherichia coli CUMT8]
gi|394383380|gb|EJE60980.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9634]
gi|394384619|gb|EJE62178.1| alanyl-tRNA ligase [Escherichia coli O26:H11 str. CVM10224]
gi|394385059|gb|EJE62604.1| alanyl-tRNA synthetase [Escherichia coli O111:H8 str. CVM9602]
gi|394393913|gb|EJE70558.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9455]
gi|394405776|gb|EJE80878.1| alanyl-tRNA synthetase [Escherichia coli O111:H11 str. CVM9553]
gi|394407236|gb|EJE82098.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10021]
gi|394417237|gb|EJE90987.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM10030]
gi|394425709|gb|EJE98645.1| alanyl-tRNA synthetase [Escherichia coli O26:H11 str. CVM9952]
gi|412964031|emb|CCK47957.1| alanyl-tRNA synthetase [Escherichia coli chi7122]
gi|412970619|emb|CCJ45269.1| alanyl-tRNA synthetase [Escherichia coli]
gi|421934086|gb|EKT91864.1| alanyl-tRNA ligase [Escherichia coli O26:H11 str. CFSAN001629]
gi|421937233|gb|EKT94850.1| alanyl-tRNA ligase [Escherichia coli O111:H8 str. CFSAN001632]
gi|421940082|gb|EKT97562.1| alanyl-tRNA ligase [Escherichia coli O111:H11 str. CFSAN001630]
gi|430897453|gb|ELC19655.1| alanyl-tRNA synthetase [Escherichia coli KTE12]
gi|431309044|gb|ELF97321.1| alanyl-tRNA synthetase [Escherichia coli KTE48]
gi|431354098|gb|ELG40841.1| alanyl-tRNA synthetase [Escherichia coli KTE91]
gi|431360729|gb|ELG47328.1| alanyl-tRNA synthetase [Escherichia coli KTE101]
gi|431384238|gb|ELG68299.1| alanyl-tRNA synthetase [Escherichia coli KTE136]
gi|431384303|gb|ELG68363.1| alanyl-tRNA synthetase [Escherichia coli KTE135]
gi|431451941|gb|ELH32395.1| alanyl-tRNA synthetase [Escherichia coli KTE184]
gi|431469227|gb|ELH49157.1| alanyl-tRNA synthetase [Escherichia coli KTE203]
gi|431609160|gb|ELI78489.1| alanyl-tRNA synthetase [Escherichia coli KTE138]
gi|431645156|gb|ELJ12806.1| alanyl-tRNA synthetase [Escherichia coli KTE163]
gi|431655112|gb|ELJ22152.1| alanyl-tRNA synthetase [Escherichia coli KTE166]
gi|431714685|gb|ELJ78866.1| alanyl-tRNA synthetase [Escherichia coli KTE90]
gi|443423226|gb|AGC88130.1| alanyl-tRNA ligase [Escherichia coli APEC O78]
gi|449316507|gb|EMD06621.1| alanyl-tRNA ligase [Escherichia coli O08]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|433169638|ref|ZP_20354261.1| alanyl-tRNA synthetase [Escherichia coli KTE180]
gi|431685914|gb|ELJ51480.1| alanyl-tRNA synthetase [Escherichia coli KTE180]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD ++ A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEACFDAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|432793848|ref|ZP_20027930.1| alanyl-tRNA synthetase [Escherichia coli KTE78]
gi|432795347|ref|ZP_20029408.1| alanyl-tRNA synthetase [Escherichia coli KTE79]
gi|431337918|gb|ELG25005.1| alanyl-tRNA synthetase [Escherichia coli KTE78]
gi|431350828|gb|ELG37633.1| alanyl-tRNA synthetase [Escherichia coli KTE79]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|432675782|ref|ZP_19911237.1| alanyl-tRNA synthetase [Escherichia coli KTE142]
gi|431212957|gb|ELF10876.1| alanyl-tRNA synthetase [Escherichia coli KTE142]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|419341106|ref|ZP_13882567.1| alanyl-tRNA synthetase [Escherichia coli DEC12E]
gi|378185655|gb|EHX46279.1| alanyl-tRNA synthetase [Escherichia coli DEC12E]
Length = 833
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 437 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 473
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 474 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 531
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 532 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 565
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 337 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 395
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 396 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 455
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 456 YAESGGQVGDK 466
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 425 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 474
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 437 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 473
>gi|374850624|dbj|BAL53608.1| alanyl-tRNA synthetase [uncultured Acidobacteria bacterium]
Length = 887
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 71/140 (50%), Gaps = 19/140 (13%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N Q VD +G + I+LD++ FYAE GGQ+ D G ++ EG++
Sbjct: 464 NGQPVDQARAGQQVDIVLDQTPFYAESGGQVGDTG-----------------VIESEGAR 506
Query: 382 YALPIFLQFSLSN--LKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHI 439
+ + + N K + H + LRVGD+++ ID RR I +HTATH+
Sbjct: 507 ALVVDTVSKTFVNDGTATVVKHAHVAHIEAGVLRVGDRVRARIDVERRERIRPHHTATHL 566
Query: 440 LNHALRFVLGPEADQKGSLV 459
L+ ALR VLGP Q GSLV
Sbjct: 567 LHAALREVLGPHVKQAGSLV 586
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N Q VD +G + I+LD++ FYAE GGQ+ D G +
Sbjct: 464 NGQPVDQARAGQQVDIVLDQTPFYAESGGQVGDTGVI 500
>gi|417309142|ref|ZP_12095981.1| Alanyl-tRNA synthetase [Escherichia coli PCN033]
gi|338769122|gb|EGP23903.1| Alanyl-tRNA synthetase [Escherichia coli PCN033]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G + ++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVNSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|218706191|ref|YP_002413710.1| alanyl-tRNA synthetase [Escherichia coli UMN026]
gi|293406188|ref|ZP_06650114.1| alaS [Escherichia coli FVEC1412]
gi|298381926|ref|ZP_06991523.1| alanyl-tRNA synthetase [Escherichia coli FVEC1302]
gi|331664248|ref|ZP_08365154.1| alanine--tRNA ligase [Escherichia coli TA143]
gi|387608333|ref|YP_006097189.1| alanyl-tRNA synthetase [Escherichia coli 042]
gi|417587703|ref|ZP_12238469.1| alanyl-tRNA synthetase [Escherichia coli STEC_C165-02]
gi|419934472|ref|ZP_14451580.1| alanyl-tRNA synthetase [Escherichia coli 576-1]
gi|432354602|ref|ZP_19597871.1| alanyl-tRNA synthetase [Escherichia coli KTE2]
gi|432402951|ref|ZP_19645701.1| alanyl-tRNA synthetase [Escherichia coli KTE26]
gi|432427221|ref|ZP_19669714.1| alanyl-tRNA synthetase [Escherichia coli KTE181]
gi|432461682|ref|ZP_19703826.1| alanyl-tRNA synthetase [Escherichia coli KTE204]
gi|432476910|ref|ZP_19718904.1| alanyl-tRNA synthetase [Escherichia coli KTE208]
gi|432490498|ref|ZP_19732365.1| alanyl-tRNA synthetase [Escherichia coli KTE213]
gi|432518779|ref|ZP_19755963.1| alanyl-tRNA synthetase [Escherichia coli KTE228]
gi|432538949|ref|ZP_19775848.1| alanyl-tRNA synthetase [Escherichia coli KTE235]
gi|432632447|ref|ZP_19868370.1| alanyl-tRNA synthetase [Escherichia coli KTE80]
gi|432642159|ref|ZP_19877989.1| alanyl-tRNA synthetase [Escherichia coli KTE83]
gi|432667153|ref|ZP_19902731.1| alanyl-tRNA synthetase [Escherichia coli KTE116]
gi|432771610|ref|ZP_20005932.1| alanyl-tRNA synthetase [Escherichia coli KTE50]
gi|432775737|ref|ZP_20010004.1| alanyl-tRNA synthetase [Escherichia coli KTE54]
gi|432840522|ref|ZP_20073985.1| alanyl-tRNA synthetase [Escherichia coli KTE140]
gi|432887785|ref|ZP_20101713.1| alanyl-tRNA synthetase [Escherichia coli KTE158]
gi|432913949|ref|ZP_20119534.1| alanyl-tRNA synthetase [Escherichia coli KTE190]
gi|432963033|ref|ZP_20152452.1| alanyl-tRNA synthetase [Escherichia coli KTE202]
gi|433019766|ref|ZP_20207946.1| alanyl-tRNA synthetase [Escherichia coli KTE105]
gi|433054329|ref|ZP_20241499.1| alanyl-tRNA synthetase [Escherichia coli KTE122]
gi|433064100|ref|ZP_20251014.1| alanyl-tRNA synthetase [Escherichia coli KTE125]
gi|433068976|ref|ZP_20255757.1| alanyl-tRNA synthetase [Escherichia coli KTE128]
gi|433159714|ref|ZP_20344545.1| alanyl-tRNA synthetase [Escherichia coli KTE177]
gi|433179518|ref|ZP_20363909.1| alanyl-tRNA synthetase [Escherichia coli KTE82]
gi|433204404|ref|ZP_20388165.1| alanyl-tRNA synthetase [Escherichia coli KTE95]
gi|218433288|emb|CAR14188.1| alanyl-tRNA synthetase [Escherichia coli UMN026]
gi|284922633|emb|CBG35721.1| alanyl-tRNA synthetase [Escherichia coli 042]
gi|291426194|gb|EFE99226.1| alaS [Escherichia coli FVEC1412]
gi|298277066|gb|EFI18582.1| alanyl-tRNA synthetase [Escherichia coli FVEC1302]
gi|331058179|gb|EGI30160.1| alanine--tRNA ligase [Escherichia coli TA143]
gi|345334038|gb|EGW66483.1| alanyl-tRNA synthetase [Escherichia coli STEC_C165-02]
gi|388407875|gb|EIL68236.1| alanyl-tRNA synthetase [Escherichia coli 576-1]
gi|430873510|gb|ELB97076.1| alanyl-tRNA synthetase [Escherichia coli KTE2]
gi|430924542|gb|ELC45254.1| alanyl-tRNA synthetase [Escherichia coli KTE26]
gi|430954257|gb|ELC73136.1| alanyl-tRNA synthetase [Escherichia coli KTE181]
gi|430987956|gb|ELD04469.1| alanyl-tRNA synthetase [Escherichia coli KTE204]
gi|431004060|gb|ELD19292.1| alanyl-tRNA synthetase [Escherichia coli KTE208]
gi|431019199|gb|ELD32606.1| alanyl-tRNA synthetase [Escherichia coli KTE213]
gi|431049812|gb|ELD59690.1| alanyl-tRNA synthetase [Escherichia coli KTE228]
gi|431068327|gb|ELD76808.1| alanyl-tRNA synthetase [Escherichia coli KTE235]
gi|431169012|gb|ELE69243.1| alanyl-tRNA synthetase [Escherichia coli KTE80]
gi|431180114|gb|ELE80002.1| alanyl-tRNA synthetase [Escherichia coli KTE83]
gi|431199565|gb|ELE98313.1| alanyl-tRNA synthetase [Escherichia coli KTE116]
gi|431313615|gb|ELG01585.1| alanyl-tRNA synthetase [Escherichia coli KTE50]
gi|431316994|gb|ELG04780.1| alanyl-tRNA synthetase [Escherichia coli KTE54]
gi|431387825|gb|ELG71637.1| alanyl-tRNA synthetase [Escherichia coli KTE140]
gi|431415263|gb|ELG97808.1| alanyl-tRNA synthetase [Escherichia coli KTE158]
gi|431437896|gb|ELH19402.1| alanyl-tRNA synthetase [Escherichia coli KTE190]
gi|431471608|gb|ELH51500.1| alanyl-tRNA synthetase [Escherichia coli KTE202]
gi|431529378|gb|ELI06079.1| alanyl-tRNA synthetase [Escherichia coli KTE105]
gi|431569127|gb|ELI42088.1| alanyl-tRNA synthetase [Escherichia coli KTE122]
gi|431579987|gb|ELI52557.1| alanyl-tRNA synthetase [Escherichia coli KTE125]
gi|431581869|gb|ELI54310.1| alanyl-tRNA synthetase [Escherichia coli KTE128]
gi|431676099|gb|ELJ42222.1| alanyl-tRNA synthetase [Escherichia coli KTE177]
gi|431699632|gb|ELJ64630.1| alanyl-tRNA synthetase [Escherichia coli KTE82]
gi|431719100|gb|ELJ83161.1| alanyl-tRNA synthetase [Escherichia coli KTE95]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGTN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGTNF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGTN 516
>gi|187734262|ref|YP_001881554.1| alanyl-tRNA synthetase [Shigella boydii CDC 3083-94]
gi|205830210|sp|B2U049.1|SYA_SHIB3 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|187431254|gb|ACD10528.1| alanyl-tRNA synthetase [Shigella boydii CDC 3083-94]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|16130604|ref|NP_417177.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
gi|170082274|ref|YP_001731594.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
gi|188492036|ref|ZP_02999306.1| alanyl-tRNA synthetase [Escherichia coli 53638]
gi|194439000|ref|ZP_03071084.1| alanyl-tRNA synthetase [Escherichia coli 101-1]
gi|238901834|ref|YP_002927630.1| alanyl-tRNA synthetase [Escherichia coli BW2952]
gi|331643380|ref|ZP_08344511.1| alanine--tRNA ligase [Escherichia coli H736]
gi|386281742|ref|ZP_10059401.1| alanyl-tRNA synthetase [Escherichia sp. 4_1_40B]
gi|386594564|ref|YP_006090964.1| alanyl-tRNA synthetase [Escherichia coli DH1]
gi|387613320|ref|YP_006116436.1| alanyl-tRNA synthetase [Escherichia coli ETEC H10407]
gi|387622380|ref|YP_006130008.1| alanyl-tRNA synthetase [Escherichia coli DH1]
gi|388478714|ref|YP_490906.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. W3110]
gi|404376001|ref|ZP_10981177.1| alanyl-tRNA synthetase [Escherichia sp. 1_1_43]
gi|417262406|ref|ZP_12049880.1| alanine--tRNA ligase [Escherichia coli 2.3916]
gi|417291559|ref|ZP_12078840.1| alanine--tRNA ligase [Escherichia coli B41]
gi|417614142|ref|ZP_12264599.1| alanyl-tRNA synthetase [Escherichia coli STEC_EH250]
gi|417944071|ref|ZP_12587316.1| alanyl-tRNA synthetase [Escherichia coli XH140A]
gi|417975531|ref|ZP_12616329.1| alanyl-tRNA synthetase [Escherichia coli XH001]
gi|419165463|ref|ZP_13709917.1| alanyl-tRNA synthetase [Escherichia coli DEC6E]
gi|419812892|ref|ZP_14337753.1| alanyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
gi|422771440|ref|ZP_16825130.1| alanyl-tRNA synthetase [Escherichia coli E482]
gi|422787779|ref|ZP_16840517.1| alanyl-tRNA synthetase [Escherichia coli H489]
gi|422791999|ref|ZP_16844701.1| alanyl-tRNA synthetase [Escherichia coli TA007]
gi|423703968|ref|ZP_17678393.1| alanyl-tRNA synthetase [Escherichia coli H730]
gi|432418138|ref|ZP_19660735.1| alanyl-tRNA synthetase [Escherichia coli KTE44]
gi|432564951|ref|ZP_19801527.1| alanyl-tRNA synthetase [Escherichia coli KTE51]
gi|432576923|ref|ZP_19813378.1| alanyl-tRNA synthetase [Escherichia coli KTE56]
gi|432628326|ref|ZP_19864299.1| alanyl-tRNA synthetase [Escherichia coli KTE77]
gi|432637908|ref|ZP_19873775.1| alanyl-tRNA synthetase [Escherichia coli KTE81]
gi|432661893|ref|ZP_19897532.1| alanyl-tRNA synthetase [Escherichia coli KTE111]
gi|432686503|ref|ZP_19921796.1| alanyl-tRNA synthetase [Escherichia coli KTE156]
gi|432687895|ref|ZP_19923175.1| alanyl-tRNA synthetase [Escherichia coli KTE161]
gi|432705449|ref|ZP_19940547.1| alanyl-tRNA synthetase [Escherichia coli KTE171]
gi|432738147|ref|ZP_19972902.1| alanyl-tRNA synthetase [Escherichia coli KTE42]
gi|432876549|ref|ZP_20094467.1| alanyl-tRNA synthetase [Escherichia coli KTE154]
gi|432956322|ref|ZP_20148049.1| alanyl-tRNA synthetase [Escherichia coli KTE197]
gi|433049076|ref|ZP_20236419.1| alanyl-tRNA synthetase [Escherichia coli KTE120]
gi|442595090|ref|ZP_21012954.1| Alanyl-tRNA synthetase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|442598432|ref|ZP_21016200.1| Alanyl-tRNA synthetase [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|450247469|ref|ZP_21901170.1| alanyl-tRNA ligase [Escherichia coli S17]
gi|2507425|sp|P00957.2|SYA_ECOLI RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830082|sp|B1XCM5.1|SYA_ECODH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|1789048|gb|AAC75739.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. MG1655]
gi|1800083|dbj|BAA16559.1| alanyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
gi|169890109|gb|ACB03816.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. DH10B]
gi|188487235|gb|EDU62338.1| alanyl-tRNA synthetase [Escherichia coli 53638]
gi|194422121|gb|EDX38124.1| alanyl-tRNA synthetase [Escherichia coli 101-1]
gi|226839360|gb|EEH71381.1| alanyl-tRNA synthetase [Escherichia sp. 1_1_43]
gi|238859951|gb|ACR61949.1| alanyl-tRNA synthetase [Escherichia coli BW2952]
gi|260448253|gb|ACX38675.1| alanyl-tRNA synthetase [Escherichia coli DH1]
gi|309703056|emb|CBJ02388.1| alanyl-tRNA synthetase [Escherichia coli ETEC H10407]
gi|315137304|dbj|BAJ44463.1| alanyl-tRNA synthetase [Escherichia coli DH1]
gi|323941473|gb|EGB37656.1| alanyl-tRNA synthetase [Escherichia coli E482]
gi|323960644|gb|EGB56270.1| alanyl-tRNA synthetase [Escherichia coli H489]
gi|323971514|gb|EGB66748.1| alanyl-tRNA synthetase [Escherichia coli TA007]
gi|331036851|gb|EGI09075.1| alanine--tRNA ligase [Escherichia coli H736]
gi|342364205|gb|EGU28307.1| alanyl-tRNA synthetase [Escherichia coli XH140A]
gi|344194692|gb|EGV48764.1| alanyl-tRNA synthetase [Escherichia coli XH001]
gi|345361176|gb|EGW93337.1| alanyl-tRNA synthetase [Escherichia coli STEC_EH250]
gi|359332954|dbj|BAL39401.1| alanyl-tRNA synthetase [Escherichia coli str. K-12 substr. MDS42]
gi|378008392|gb|EHV71351.1| alanyl-tRNA synthetase [Escherichia coli DEC6E]
gi|385154307|gb|EIF16322.1| alanyl-tRNA synthetase [Escherichia coli O32:H37 str. P4]
gi|385707084|gb|EIG44116.1| alanyl-tRNA synthetase [Escherichia coli H730]
gi|386120933|gb|EIG69551.1| alanyl-tRNA synthetase [Escherichia sp. 4_1_40B]
gi|386223852|gb|EII46201.1| alanine--tRNA ligase [Escherichia coli 2.3916]
gi|386253881|gb|EIJ03571.1| alanine--tRNA ligase [Escherichia coli B41]
gi|430937979|gb|ELC58228.1| alanyl-tRNA synthetase [Escherichia coli KTE44]
gi|431092199|gb|ELD97903.1| alanyl-tRNA synthetase [Escherichia coli KTE51]
gi|431114159|gb|ELE17711.1| alanyl-tRNA synthetase [Escherichia coli KTE56]
gi|431162103|gb|ELE62561.1| alanyl-tRNA synthetase [Escherichia coli KTE77]
gi|431169323|gb|ELE69542.1| alanyl-tRNA synthetase [Escherichia coli KTE81]
gi|431198516|gb|ELE97338.1| alanyl-tRNA synthetase [Escherichia coli KTE111]
gi|431220477|gb|ELF17810.1| alanyl-tRNA synthetase [Escherichia coli KTE156]
gi|431237947|gb|ELF32893.1| alanyl-tRNA synthetase [Escherichia coli KTE161]
gi|431241987|gb|ELF36414.1| alanyl-tRNA synthetase [Escherichia coli KTE171]
gi|431280991|gb|ELF71899.1| alanyl-tRNA synthetase [Escherichia coli KTE42]
gi|431419590|gb|ELH01939.1| alanyl-tRNA synthetase [Escherichia coli KTE154]
gi|431466495|gb|ELH46515.1| alanyl-tRNA synthetase [Escherichia coli KTE197]
gi|431563388|gb|ELI36600.1| alanyl-tRNA synthetase [Escherichia coli KTE120]
gi|441604875|emb|CCP98104.1| Alanyl-tRNA synthetase [Escherichia coli O10:K5(L):H4 str. ATCC
23506]
gi|441652942|emb|CCQ01799.1| Alanyl-tRNA synthetase [Escherichia coli O5:K4(L):H4 str. ATCC
23502]
gi|449318268|gb|EMD08342.1| alanyl-tRNA ligase [Escherichia coli S17]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|419403166|ref|ZP_13943886.1| alanyl-tRNA synthetase [Escherichia coli DEC15C]
gi|378245421|gb|EHY05358.1| alanyl-tRNA synthetase [Escherichia coli DEC15C]
Length = 833
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 437 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 473
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 474 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 531
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 532 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 565
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 337 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 395
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 396 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 455
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 456 YAESGGQVGDK 466
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 425 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 474
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 437 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 473
>gi|422767798|ref|ZP_16821524.1| alanyl-tRNA synthetase [Escherichia coli E1520]
gi|323935749|gb|EGB32063.1| alanyl-tRNA synthetase [Escherichia coli E1520]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|222157385|ref|YP_002557524.1| alanyl-tRNA synthetase [Escherichia coli LF82]
gi|331674208|ref|ZP_08374968.1| alanine--tRNA ligase [Escherichia coli TA280]
gi|387617964|ref|YP_006120986.1| alanyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
gi|422828071|ref|ZP_16876243.1| alanyl-tRNA synthetase [Escherichia coli B093]
gi|432603350|ref|ZP_19839592.1| alanyl-tRNA synthetase [Escherichia coli KTE66]
gi|432681300|ref|ZP_19916670.1| alanyl-tRNA synthetase [Escherichia coli KTE143]
gi|222034390|emb|CAP77132.1| alanyl-tRNA synthetase [Escherichia coli LF82]
gi|312947225|gb|ADR28052.1| alanyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
gi|331068302|gb|EGI39697.1| alanine--tRNA ligase [Escherichia coli TA280]
gi|371615511|gb|EHO03910.1| alanyl-tRNA synthetase [Escherichia coli B093]
gi|431139709|gb|ELE41487.1| alanyl-tRNA synthetase [Escherichia coli KTE66]
gi|431219499|gb|ELF16910.1| alanyl-tRNA synthetase [Escherichia coli KTE143]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|170019057|ref|YP_001724011.1| alanyl-tRNA synthetase [Escherichia coli ATCC 8739]
gi|205830085|sp|B1IUY2.1|SYA_ECOLC RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|169753985|gb|ACA76684.1| alanyl-tRNA synthetase [Escherichia coli ATCC 8739]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|331678669|ref|ZP_08379343.1| alanine--tRNA ligase [Escherichia coli H591]
gi|331073499|gb|EGI44820.1| alanine--tRNA ligase [Escherichia coli H591]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|251785981|ref|YP_003000285.1| alanyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|253772448|ref|YP_003035279.1| alanyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254162628|ref|YP_003045736.1| alanyl-tRNA synthetase [Escherichia coli B str. REL606]
gi|254289389|ref|YP_003055137.1| alanyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|242378254|emb|CAQ33029.1| alanyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|253323492|gb|ACT28094.1| alanyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|253974529|gb|ACT40200.1| alanyl-tRNA synthetase [Escherichia coli B str. REL606]
gi|253978696|gb|ACT44366.1| alanyl-tRNA synthetase [Escherichia coli BL21(DE3)]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|293412052|ref|ZP_06654775.1| alanyl-tRNA synthetase [Escherichia coli B354]
gi|432870126|ref|ZP_20090583.1| alanyl-tRNA synthetase [Escherichia coli KTE147]
gi|291468823|gb|EFF11314.1| alanyl-tRNA synthetase [Escherichia coli B354]
gi|431409096|gb|ELG92271.1| alanyl-tRNA synthetase [Escherichia coli KTE147]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|170682603|ref|YP_001744844.1| alanyl-tRNA synthetase [Escherichia coli SMS-3-5]
gi|432442120|ref|ZP_19684458.1| alanyl-tRNA synthetase [Escherichia coli KTE189]
gi|432447225|ref|ZP_19689523.1| alanyl-tRNA synthetase [Escherichia coli KTE191]
gi|433014935|ref|ZP_20203274.1| alanyl-tRNA synthetase [Escherichia coli KTE104]
gi|433024508|ref|ZP_20212487.1| alanyl-tRNA synthetase [Escherichia coli KTE106]
gi|433322487|ref|ZP_20399930.1| alanyl-tRNA ligase [Escherichia coli J96]
gi|205830086|sp|B1LQ15.1|SYA_ECOSM RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|170520321|gb|ACB18499.1| alanyl-tRNA synthetase [Escherichia coli SMS-3-5]
gi|430965368|gb|ELC82789.1| alanyl-tRNA synthetase [Escherichia coli KTE189]
gi|430972071|gb|ELC89069.1| alanyl-tRNA synthetase [Escherichia coli KTE191]
gi|431529252|gb|ELI05954.1| alanyl-tRNA synthetase [Escherichia coli KTE104]
gi|431533732|gb|ELI10225.1| alanyl-tRNA synthetase [Escherichia coli KTE106]
gi|432348993|gb|ELL43435.1| alanyl-tRNA ligase [Escherichia coli J96]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLATGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|50286987|ref|XP_445923.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525229|emb|CAG58842.1| unnamed protein product [Candida glabrata]
Length = 956
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/158 (37%), Positives = 82/158 (51%), Gaps = 31/158 (19%)
Query: 323 KQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
++FV +S G + GI+LDK+ FYAEQGGQ YD G ++ ++D+++
Sbjct: 511 EKFVTEISEPGKKYGIILDKTCFYAEQGGQEYDTGKIV-IDDKAE--------------- 554
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
FS+ N++ V TLS L V D + D RR PI +NHT THIL
Sbjct: 555 --------FSVENVQLYNGFVFHTGTLSEGKLSVDDVIIASYDELRRFPIKNNHTGTHIL 606
Query: 441 NHALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
N+AL+ LG + DQKGSLV L H+ + EE
Sbjct: 607 NYALKETLGNDIDQKGSLVAPEKLRFDFSHKKALTIEE 644
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 35/47 (74%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
ESK L G WRLYDTYGFPVDLT+LM EE+ L +D +E AK+++
Sbjct: 409 ESKTLDGKQVWRLYDTYGFPVDLTELMAEEQNLKIDGPGFEKAKQES 455
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 226 KRLRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
K L+ ++FV +S G + GI+LDK+ FYAEQGGQ YD G ++
Sbjct: 503 KILKLHDGEKFVTEISEPGKKYGIILDKTCFYAEQGGQEYDTGKIV 548
>gi|307254463|ref|ZP_07536300.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|307258922|ref|ZP_07540653.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
str. 56153]
gi|306862604|gb|EFM94561.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|306866946|gb|EFM98803.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 11
str. 56153]
Length = 874
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 31/153 (20%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G SN + VD++ SG A I+LD++ FYAE GGQ+ D G + + + N
Sbjct: 471 GLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI------------STGICN- 517
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTA 436
F++++ +K ++ + L S +L +GDK+ +D RR I +NH+A
Sbjct: 518 ------------FAVNDTQKYGQVFGHIGQLTSGSLSIGDKVTATVDATRRVAITANHSA 565
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLHENIM 469
TH+L+ ALR VLG QKGSLV ENI+
Sbjct: 566 THLLHSALREVLGDHVAQKGSLV-----SENIL 593
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
+ T+VGL N + VD++ SG A I+LD++ FYAE GGQ+ D G +S
Sbjct: 466 QATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLIS 512
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
E+ L G+VA++LYDTYGFP+DLT + E+ L++D +E A+ AQ E
Sbjct: 385 ENNTLSGEVAFKLYDTYGFPLDLTADVCRERELTIDEAGFE-AEMTAQRE 433
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N + VD++ SG A I+LD++ FYAE GGQ+ D G +
Sbjct: 475 NGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI 511
>gi|307245509|ref|ZP_07527596.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|306853568|gb|EFM85786.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
Length = 874
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 31/153 (20%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G SN + VD++ SG A I+LD++ FYAE GGQ+ D G + + + N
Sbjct: 471 GLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI------------STGICN- 517
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTA 436
F++++ +K ++ + L S +L +GDK+ +D RR I +NH+A
Sbjct: 518 ------------FAVNDTQKYGQVFGHIGQLTSGSLSIGDKVTATVDATRRVAITANHSA 565
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLHENIM 469
TH+L+ ALR VLG QKGSLV ENI+
Sbjct: 566 THLLHSALREVLGDHVAQKGSLV-----SENIL 593
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
+ T+VGL N + VD++ SG A I+LD++ FYAE GGQ+ D G +S
Sbjct: 466 QATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLIS 512
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
E+ L G+VA++LYDTYGFP+DLT + E+ L++D +E A+ AQ E
Sbjct: 385 ENNTLSGEVAFKLYDTYGFPLDLTADVCRERELTIDKAGFE-AEMTAQRE 433
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N + VD++ SG A I+LD++ FYAE GGQ+ D G +
Sbjct: 475 NGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI 511
>gi|417708746|ref|ZP_12357774.1| alanyl-tRNA synthetase [Shigella flexneri VA-6]
gi|332999433|gb|EGK19018.1| alanyl-tRNA synthetase [Shigella flexneri VA-6]
Length = 784
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 83/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ ID ARR I NH+ATH++ AL
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADIDEARRARIRLNHSATHLMYAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|408389623|gb|EKJ69061.1| hypothetical protein FPSE_10760 [Fusarium pseudograminearum CS3096]
Length = 957
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 73/135 (54%), Gaps = 31/135 (22%)
Query: 329 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPI-- 386
VS T G+L+DK+NFYAE GGQ+ D G ++ ++D ++ ++ L+ Y I
Sbjct: 519 VSEKTALGLLIDKTNFYAESGGQVADTGRIV-IDDVAEFKV-------LDVQNYGGYILH 570
Query: 387 --FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
++++ TL GDK+ D RR PI +NH+ THILNH+L
Sbjct: 571 NGYIEYG-------------------TLSSGDKVICEYDELRRSPIRNNHSGTHILNHSL 611
Query: 445 RFVLGPEADQKGSLV 459
R VLG E +QKGSLV
Sbjct: 612 REVLGDEVNQKGSLV 626
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSV 70
+K L GDV WRLYDT+GFPVDLT+LM EE+ L +D E + A+ KA+ E+ ++ SV
Sbjct: 409 AKKLQGDVVWRLYDTFGFPVDLTRLMAEERNLEIDDEEVKAAQDKAR---EASKAVKESV 465
Query: 71 E 71
+
Sbjct: 466 Q 466
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
++P+ + SVEFCGGTH+ + D + E IAKG I++Y G
Sbjct: 705 ADPKKPEWRQYSVEFCGGTHVEQTGLIKDLILIEESGIAKGIRRIIAYTG 754
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 240 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
VS T G+L+DK+NFYAE GGQ+ D G ++
Sbjct: 519 VSEKTALGLLIDKTNFYAESGGQVADTGRIV 549
>gi|331654174|ref|ZP_08355174.1| alanine--tRNA ligase [Escherichia coli M718]
gi|331047556|gb|EGI19633.1| alanine--tRNA ligase [Escherichia coli M718]
Length = 876
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVTQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|415811763|ref|ZP_11504076.1| alanyl-tRNA synthetase [Escherichia coli LT-68]
gi|323173022|gb|EFZ58653.1| alanyl-tRNA synthetase [Escherichia coli LT-68]
Length = 714
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 424
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 425 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 483 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|329296669|ref|ZP_08254005.1| alanyl-tRNA synthetase [Plautia stali symbiont]
Length = 875
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 71/136 (52%), Gaps = 26/136 (19%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q V+ V++G +A ++LD++ FY E GGQ+ D G + G N E
Sbjct: 478 QQVEQVAAGQDAVVILDQTPFYGESGGQVGDTGVLTGQNAE------------------- 518
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
FS+ + +K K + L LRVGD+L+ +D RR I+ NH+ATH+++
Sbjct: 519 ------FSVQDTQKYGKAFGHIGKLRQGQLRVGDRLQAQVDEVRRSRIILNHSATHLMHE 572
Query: 443 ALRFVLGPEADQKGSL 458
ALR VLG QKGSL
Sbjct: 573 ALRKVLGDHVGQKGSL 588
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 57/128 (44%), Gaps = 13/128 (10%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
+AKL + L G+ +RLYDT+GFP DLT + E+ L +D +E A ++ + +
Sbjct: 382 LAKL-KGDTLDGETVFRLYDTFGFPADLTADVCRERNLKIDEAGFEAAMEQQRQRAREAS 440
Query: 65 G----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQ 112
G +T +F G HL++ V + + E +A G + V +
Sbjct: 441 GFGTDYNTVIRFDTPTQFKGYDHLSLEATVQALFVDGQQVEQVAAGQDAVVILDQTPFYG 500
Query: 113 SHSGSIND 120
G + D
Sbjct: 501 ESGGQVGD 508
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGL-RYNKQF 287
Q V+ V++G +A ++LD++ FY E GGQ+ D G + G N E +V +Y K F
Sbjct: 478 QQVEQVAAGQDAVVILDQTPFYGESGGQVGDTGVLTGQNAEFSVQDTQKYGKAF 531
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
E TV L + Q V+ V++G +A ++LD++ FY E GGQ+ D G ++ +
Sbjct: 467 EATVQALFVDGQQVEQVAAGQDAVVILDQTPFYGESGGQVGDTGVLTGQ 515
>gi|296420542|ref|XP_002839828.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636034|emb|CAZ84019.1| unnamed protein product [Tuber melanosporum]
Length = 959
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 75/132 (56%), Gaps = 23/132 (17%)
Query: 328 SVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIF 387
++S T+ G++LDK+NFYAEQGGQ YD G ++ ++ E+++++ V + G +
Sbjct: 521 NISRYTQLGLILDKTNFYAEQGGQEYDTGKIL-IDGEAELDV---QNVQVYGGYVLHTGY 576
Query: 388 LQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFV 447
+++ TL VGD + D RR PI +NHT TH+LN+ALR V
Sbjct: 577 IKYG-------------------TLSVGDDVICEYDELRRWPIRNNHTGTHVLNYALREV 617
Query: 448 LGPEADQKGSLV 459
LG +QKGSLV
Sbjct: 618 LGDGIEQKGSLV 629
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 40/54 (74%), Gaps = 2/54 (3%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
SKVL G WRLYDT+GFPVDLT++M EE GL ++ E +E A KA+S+ S+A
Sbjct: 411 SKVLKGSDVWRLYDTFGFPVDLTRIMAEENGLEINEEEFERA--KAESKEASKA 462
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 26/32 (81%)
Query: 239 SVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
++S T+ G++LDK+NFYAEQGGQ YD G ++
Sbjct: 521 NISRYTQLGLILDKTNFYAEQGGQEYDTGKIL 552
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 55/130 (42%), Gaps = 15/130 (11%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + V + L+ D++ ++ + S+EFCGGTH+
Sbjct: 688 ETYPDPVRVVSVGVPIEELTRDVK--------------NKQWRKVSIEFCGGTHVQKTDD 733
Query: 84 VGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGSINDEMVNKYPSLYRLFRTVHKQKYV 142
+ D I E IAKG IV+ G+ S +E +N L R + K V
Sbjct: 734 IKDLIILEENGIAKGIRRIVAVTGNDAGKVQKIASQFEERINALGKLPAGPRKEAEIKSV 793
Query: 143 QDALNVSCLS 152
Q LN +S
Sbjct: 794 QADLNSLVIS 803
>gi|417663255|ref|ZP_12312835.1| alanyl-tRNA synthetase [Escherichia coli AA86]
gi|432889934|ref|ZP_20102980.1| alanyl-tRNA synthetase [Escherichia coli KTE165]
gi|330908728|gb|EGH37242.1| alanyl-tRNA synthetase [Escherichia coli AA86]
gi|431432808|gb|ELH14484.1| alanyl-tRNA synthetase [Escherichia coli KTE165]
Length = 876
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLS-HTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAVGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD ++ A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + S +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|392980372|ref|YP_006478960.1| alanyl-tRNA ligase [Enterobacter cloacae subsp. dissolvens SDM]
gi|392326305|gb|AFM61258.1| alanyl-tRNA ligase [Enterobacter cloacae subsp. dissolvens SDM]
Length = 875
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 80/135 (59%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+S+S+G +A ++LDK+ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VESISAGQDAVVILDKTPFYAESGGQVGDKG-------------------ELKGNGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
FS+S+ +K + + L L S +L+VG+ ++ ++D ARR I NH+ATH+++ AL
Sbjct: 519 ----FSVSDTQKYGQAIGHLGKLVSGSLKVGEGVQANVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 REVLGTHVAQKGSLV 589
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-KGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G L + V + + E+I+ G + V
Sbjct: 439 SSGFGADYNAMIRVDSASEFKGYEALELTGKVTALFVDGKAVESISAGQDAVVILDKTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + V+S+S+G +A ++LDK+ FYAE GGQ+ D+G + F SVS +
Sbjct: 468 GKVTALFVDGKAVESISAGQDAVVILDKTPFYAESGGQVGDKGELKGNGFSFSVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
V+S+S+G +A ++LDK+ FYAE GGQ+ D+G + G
Sbjct: 480 VESISAGQDAVVILDKTPFYAESGGQVGDKGELKG 514
>gi|331648414|ref|ZP_08349502.1| alanine--tRNA ligase [Escherichia coli M605]
gi|386620257|ref|YP_006139837.1| alanyl-tRNA synthetase [Escherichia coli NA114]
gi|387830543|ref|YP_003350480.1| alanyl-tRNA synthetase [Escherichia coli SE15]
gi|432422997|ref|ZP_19665539.1| alanyl-tRNA synthetase [Escherichia coli KTE178]
gi|432501136|ref|ZP_19742891.1| alanyl-tRNA synthetase [Escherichia coli KTE216]
gi|432559859|ref|ZP_19796526.1| alanyl-tRNA synthetase [Escherichia coli KTE49]
gi|432695463|ref|ZP_19930659.1| alanyl-tRNA synthetase [Escherichia coli KTE162]
gi|432706925|ref|ZP_19942005.1| alanyl-tRNA synthetase [Escherichia coli KTE6]
gi|432920690|ref|ZP_20124279.1| alanyl-tRNA synthetase [Escherichia coli KTE173]
gi|432928374|ref|ZP_20129494.1| alanyl-tRNA synthetase [Escherichia coli KTE175]
gi|432982023|ref|ZP_20170796.1| alanyl-tRNA synthetase [Escherichia coli KTE211]
gi|433097465|ref|ZP_20283646.1| alanyl-tRNA synthetase [Escherichia coli KTE139]
gi|433106909|ref|ZP_20292879.1| alanyl-tRNA synthetase [Escherichia coli KTE148]
gi|281179700|dbj|BAI56030.1| alanyl-tRNA synthetase [Escherichia coli SE15]
gi|331042161|gb|EGI14303.1| alanine--tRNA ligase [Escherichia coli M605]
gi|333970758|gb|AEG37563.1| Alanyl-tRNA synthetase [Escherichia coli NA114]
gi|430943270|gb|ELC63388.1| alanyl-tRNA synthetase [Escherichia coli KTE178]
gi|431027521|gb|ELD40583.1| alanyl-tRNA synthetase [Escherichia coli KTE216]
gi|431090060|gb|ELD95833.1| alanyl-tRNA synthetase [Escherichia coli KTE49]
gi|431232892|gb|ELF28494.1| alanyl-tRNA synthetase [Escherichia coli KTE162]
gi|431256870|gb|ELF49804.1| alanyl-tRNA synthetase [Escherichia coli KTE6]
gi|431439978|gb|ELH21308.1| alanyl-tRNA synthetase [Escherichia coli KTE173]
gi|431442361|gb|ELH23450.1| alanyl-tRNA synthetase [Escherichia coli KTE175]
gi|431490147|gb|ELH69764.1| alanyl-tRNA synthetase [Escherichia coli KTE211]
gi|431614442|gb|ELI83595.1| alanyl-tRNA synthetase [Escherichia coli KTE139]
gi|431625822|gb|ELI94379.1| alanyl-tRNA synthetase [Escherichia coli KTE148]
Length = 876
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLS-HTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAVGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD ++ A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + S +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|348576208|ref|XP_003473879.1| PREDICTED: LOW QUALITY PROTEIN: alanyl-tRNA synthetase,
mitochondrial-like [Cavia porcellus]
Length = 985
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 74/147 (50%), Gaps = 30/147 (20%)
Query: 313 QIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFS 372
Q+Y E + V SV G G+LL+++NFYAEQGGQ D G+++ + + +
Sbjct: 537 QLYTE----DGAAVASVGPGQRCGLLLNRTNFYAEQGGQASDRGYLVRIEQQDVL----- 587
Query: 373 SLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTL--SHTLRVGDKLKLHIDTARRRPI 430
F ++ + V LH + S L+VGD ++LH+D R
Sbjct: 588 -----------------FPVTQAQVWGGFV--LHEVLASEHLQVGDLVQLHVDEDWRLSC 628
Query: 431 MSNHTATHILNHALRFVLGPEADQKGS 457
M HTATH+LN ALR LGP +Q+GS
Sbjct: 629 MEKHTATHLLNWALRETLGPNVEQRGS 655
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 8/76 (10%)
Query: 3 QTIAKLGESKVLPGDVAWRLY--DTYGFPVDLTQLMVEEKGLSVDME-----VYEDAKKK 55
+T+ +LG S + P DVAW L G P+DL +LM+ EKG+ +D E V E+A+ +
Sbjct: 421 RTLKRLGPSDLFPADVAWSLSMSGNLGLPLDLVELMLAEKGVHLDSERLAQLVEEEAQLR 480
Query: 56 A-QSEPESQAGMETSV 70
Q+EP + + V
Sbjct: 481 GRQAEPAQEQRLRLDV 496
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 230 FSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
++ + V SV G G+LL+++NFYAEQGGQ D G+++ + +
Sbjct: 539 YTEDGAAVASVGPGQRCGLLLNRTNFYAEQGGQASDRGYLVRIEQQ 584
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 11/80 (13%)
Query: 29 PVDLTQLMVEEKGLSVDMEVYEDAKKKAQS--------EPESQAGMETSVEFCGGTHLAM 80
P++LT + GL EVY D + +P SQA ++ SVE C GTHL
Sbjct: 700 PLELTACI---PGLRSLDEVYPDPVRVVSVGVPVACALDPMSQAALQASVELCCGTHLLR 756
Query: 81 AHHVGDFCISSEEAIAKGSN 100
VGD I+ E + KG+
Sbjct: 757 TGAVGDLVITGERQLTKGTT 776
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 288 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGI 337
V SV G G+LL+++NFYAEQGGQ D G++ + D + T+A +
Sbjct: 546 VASVGPGQRCGLLLNRTNFYAEQGGQASDRGYLVRIEQQDVLFPVTQAQV 595
>gi|432407726|ref|ZP_19650432.1| alanyl-tRNA synthetase [Escherichia coli KTE28]
gi|430928657|gb|ELC49203.1| alanyl-tRNA synthetase [Escherichia coli KTE28]
Length = 876
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLS-HTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAVGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + S +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|432398599|ref|ZP_19641377.1| alanyl-tRNA synthetase [Escherichia coli KTE25]
gi|432724119|ref|ZP_19959035.1| alanyl-tRNA synthetase [Escherichia coli KTE17]
gi|432728701|ref|ZP_19963577.1| alanyl-tRNA synthetase [Escherichia coli KTE18]
gi|432742385|ref|ZP_19977102.1| alanyl-tRNA synthetase [Escherichia coli KTE23]
gi|432991750|ref|ZP_20180413.1| alanyl-tRNA synthetase [Escherichia coli KTE217]
gi|433111885|ref|ZP_20297744.1| alanyl-tRNA synthetase [Escherichia coli KTE150]
gi|430914177|gb|ELC35280.1| alanyl-tRNA synthetase [Escherichia coli KTE25]
gi|431264373|gb|ELF56087.1| alanyl-tRNA synthetase [Escherichia coli KTE17]
gi|431272266|gb|ELF63373.1| alanyl-tRNA synthetase [Escherichia coli KTE18]
gi|431282618|gb|ELF73497.1| alanyl-tRNA synthetase [Escherichia coli KTE23]
gi|431493892|gb|ELH73483.1| alanyl-tRNA synthetase [Escherichia coli KTE217]
gi|431626921|gb|ELI95333.1| alanyl-tRNA synthetase [Escherichia coli KTE150]
Length = 876
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLS-HTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAVGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + S +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|301102849|ref|XP_002900511.1| alanyl-tRNA synthetase, mitochondrial precursor [Phytophthora
infestans T30-4]
gi|262101774|gb|EEY59826.1| alanyl-tRNA synthetase, mitochondrial precursor [Phytophthora
infestans T30-4]
Length = 980
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 28/148 (18%)
Query: 321 SNKQFVDSVSSGT--EAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
S+ FVD V +G G++LDK++FY++ GGQIYD G + N
Sbjct: 535 SSSDFVDEVKAGDFERVGVILDKTSFYSQAGGQIYDTGVLTASN---------------- 578
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTAT 437
L+ + +++ V + +++ +++VGD + +D ARR I NHT T
Sbjct: 579 ---------LKLDVDSVESYAGYVMHMGSIATGSIKVGDSVACEVDYARRAKIAPNHTMT 629
Query: 438 HILNHALRFVLGPEADQKGSLVYRYHLH 465
H LN ALR VLG DQ+GSLV L
Sbjct: 630 HALNFALRKVLGTVVDQRGSLVDESRLR 657
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
V+PG+ A+ LYD+ GFP+DLT++M EE+G++VD++ YE+ + QSE
Sbjct: 430 VVPGEDAFFLYDSMGFPIDLTEIMAEEEGMTVDIKGYEEC-MRLQSE 475
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 287 FVDSVSSGT--EAGILLDKSNFYAEQGGQIYDEGFMSNKQF---VDSVSS 331
FVD V +G G++LDK++FY++ GGQIYD G ++ VDSV S
Sbjct: 539 FVDEVKAGDFERVGVILDKTSFYSQAGGQIYDTGVLTASNLKLDVDSVES 588
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 236 FVDSVSSGT--EAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
FVD V +G G++LDK++FY++ GGQIYD G + N
Sbjct: 539 FVDEVKAGDFERVGVILDKTSFYSQAGGQIYDTGVLTASN 578
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 23/45 (51%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVS 103
+PE SVEFCGGTHL F + E AIAKG VS
Sbjct: 731 DPEKSKWSNFSVEFCGGTHLKNTKEAKRFVLYEEGAIAKGIRRVS 775
>gi|401675024|ref|ZP_10807018.1| alanyl-tRNA synthetase [Enterobacter sp. SST3]
gi|400217481|gb|EJO48373.1| alanyl-tRNA synthetase [Enterobacter sp. SST3]
Length = 875
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDS+S+G EA ++LDK+ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDSISAGQEAVVILDKTPFYAESGGQVGDKG-------------------ELKGNGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
FS+++ +K + + L S +L+VG+ ++ ++D ARR I NH+ATH+++ AL
Sbjct: 519 ----FSVTDTQKYGQAIGHQGKLVSGSLKVGEGVQANVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RDVLGTHVAQKGSLV 589
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-KGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG 65
+G
Sbjct: 439 SSG 441
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VDS+S+G EA ++LDK+ FYAE GGQ+ D+G + F SV+ +
Sbjct: 468 GKVTALFVDGKAVDSISAGQEAVVILDKTPFYAESGGQVGDKGELKGNGFSFSVTDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VDS+S+G EA ++LDK+ FYAE GGQ+ D+G + G
Sbjct: 480 VDSISAGQEAVVILDKTPFYAESGGQVGDKGELKG 514
>gi|134093868|ref|YP_001098943.1| alanyl-tRNA synthetase [Herminiimonas arsenicoxydans]
gi|205830068|sp|A4G2S9.1|SYA_HERAR RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|133737771|emb|CAL60816.1| alanyl-tRNA synthetase [Herminiimonas arsenicoxydans]
Length = 869
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/161 (35%), Positives = 79/161 (49%), Gaps = 38/161 (23%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V + G ++LD + FYAE GGQ+ D+GF V+ EG
Sbjct: 474 VQQLKEGQAGIVVLDTTPFYAESGGQVGDQGF-----------------VSAEG------ 510
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH--TLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+QF + + +K K V H + TL+VGDK++ +D ARR M NH+ THI++ A
Sbjct: 511 --VQFGVEDTQKIKADVYGHHGVQTQGTLKVGDKVQAAVDGARRAATMRNHSVTHIMHKA 568
Query: 444 LRFVLGPEADQKGSLV----YRYHL-------HENIMECEE 473
LR VLG QKGSLV R+ HE I+E E+
Sbjct: 569 LREVLGEHVQQKGSLVDAEKTRFDFAHNAPVTHEQILEIEK 609
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA--KKKAQSEPESQAGM 66
G KVLPG+VA++L+DT+GFP+DL+ + E G+SVD + A K+KA + M
Sbjct: 380 GGVKVLPGEVAFKLHDTFGFPLDLSADVCREAGVSVDEAGFAAAMEKQKAAGRAAGKFKM 439
Query: 67 ETSVEFCG 74
E +VE+ G
Sbjct: 440 ERAVEYTG 447
>gi|392597601|gb|EIW86923.1| hypothetical protein CONPUDRAFT_115791 [Coniophora puteana
RWD-64-598 SS2]
Length = 953
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/151 (39%), Positives = 78/151 (51%), Gaps = 36/151 (23%)
Query: 317 EGFMSNKQFVDSVSS---GTEAGILLDKSNFYAEQGGQIYDEGFMI--GVNDESQIELWF 371
+G +KQF+ S S+ G G+LLD+++FYAE GGQ D G ++ GV D
Sbjct: 504 KGIYHDKQFLSSTSNIPEGATFGVLLDRTSFYAEAGGQENDTGNIVIDGVAD-------- 555
Query: 372 SSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHT--LSH-TLRVGDKLKLHIDTARRR 428
F ++N++ V LHT L + L GD + D RR
Sbjct: 556 ------------------FEVTNVQSYSGYV--LHTGHLKYGQLNAGDDVISSYDELRRW 595
Query: 429 PIMSNHTATHILNHALRFVLGPEADQKGSLV 459
P+ SNHTATHILN+ALR VLG DQKGSLV
Sbjct: 596 PLRSNHTATHILNYALREVLGDHIDQKGSLV 626
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 39/54 (72%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
T AK K L G WRLYDTYGFPVDLT+LM EE GLS++ + +E+A++ ++
Sbjct: 401 TKAKEQGLKELHGGDIWRLYDTYGFPVDLTRLMAEEHGLSINEKQFEEAQEASK 454
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 61 ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGS 117
E+ +TS+EFCGGTH+A + +F I E IAKG I++ G + S S
Sbjct: 708 ENPQWRKTSIEFCGGTHVAKTGDIKEFVIIEESGIAKGIRRIIAVTGQEAQEASRIAS 765
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 268 FMIGVNDEGTVVGLRYNKQFVDSVSS---GTEAGILLDKSNFYAEQGGQIYDEG 318
F +G N V G+ ++KQF+ S S+ G G+LLD+++FYAE GGQ D G
Sbjct: 494 FQLG-NINAIVKGIYHDKQFLSSTSNIPEGATFGVLLDRTSFYAEAGGQENDTG 546
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 5/48 (10%)
Query: 232 YNKQFVDSVSS---GTEAGILLDKSNFYAEQGGQIYDEGFMI--GVND 274
++KQF+ S S+ G G+LLD+++FYAE GGQ D G ++ GV D
Sbjct: 508 HDKQFLSSTSNIPEGATFGVLLDRTSFYAEAGGQENDTGNIVIDGVAD 555
>gi|387888227|ref|YP_006318525.1| alanyl-tRNA synthetase [Escherichia blattae DSM 4481]
gi|414595434|ref|ZP_11445055.1| alanyl-tRNA synthetase [Escherichia blattae NBRC 105725]
gi|386923060|gb|AFJ46014.1| alanyl-tRNA synthetase [Escherichia blattae DSM 4481]
gi|403193598|dbj|GAB82707.1| alanyl-tRNA synthetase [Escherichia blattae NBRC 105725]
Length = 875
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 74/135 (54%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD V+ G EA ++LDK+ FYAE GGQ+ D+G EL +S
Sbjct: 480 VDQVNPGQEAVVVLDKTPFYAESGGQVGDKG-----------ELKAASGT---------- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F +++ +K + + TLSH L VGD+++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FQVTDTQKYGQAIGHQGTLSHGVLTVGDRVEAQVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 68/165 (41%), Gaps = 21/165 (12%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFP+DLT + E+ + VD + A + + +G
Sbjct: 389 TLDGETAFRLYDTYGFPLDLTADVCRERNIKVDEAGFNAAMETQRRRARESSGFGTDYNS 448
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++T+ EF G L + + + S + + G V + G + D
Sbjct: 449 MIRVDTASEFKGYDTLDLNGTITALFVDGKSVDQVNPGQEAVVVLDKTPFYAESGGQVGD 508
Query: 121 EMVNKYPSLYRLFRTVHKQKYVQDALNVSCLSFRGVWEHG-MSVG 164
+ K S F+ QKY Q + +G HG ++VG
Sbjct: 509 KGELKAAS--GTFQVTDTQKYGQ------AIGHQGTLSHGVLTVG 545
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
GT+ L + + VD V+ G EA ++LDK+ FYAE GGQ+ D+G
Sbjct: 468 GTITALFVDGKSVDQVNPGQEAVVVLDKTPFYAESGGQVGDKG 510
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 267
VD V+ G EA ++LDK+ FYAE GGQ+ D+G
Sbjct: 480 VDQVNPGQEAVVVLDKTPFYAESGGQVGDKG 510
>gi|423125360|ref|ZP_17113039.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5250]
gi|376398966|gb|EHT11587.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5250]
Length = 875
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 76/134 (56%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD+V++G EA ++LD++ FYAE GGQ+ D+G + G FS VN + KY
Sbjct: 480 VDAVNAGQEAVVILDQTPFYAESGGQVGDKGELKGAG--------FSFHVN-DAQKYGQA 530
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I ++ K S +L+VGD ++ +D ARR+ I NH+ATH+++ ALR
Sbjct: 531 I------GHIGK---------VTSGSLKVGDAVQADVDEARRQRIRLNHSATHLMHAALR 575
Query: 446 FVLGPEADQKGSLV 459
VLG QKGSLV
Sbjct: 576 QVLGTHVAQKGSLV 589
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG 65
+G
Sbjct: 439 SSG 441
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD+V++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFIDGKAVDAVNAGQEAVVILDQTPFYAESGGQVGDKGELKGAGF 517
Score = 42.0 bits (97), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VD+V++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDAVNAGQEAVVILDQTPFYAESGGQVGDKGELKGA 515
>gi|324509264|gb|ADY43900.1| Alanyl-tRNA synthetase [Ascaris suum]
Length = 603
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/47 (72%), Positives = 40/47 (85%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
E+K PGD+AWRLYDTYGFPVDLTQLM EEK LSVDM+ +E ++KA
Sbjct: 403 EAKQFPGDIAWRLYDTYGFPVDLTQLMAEEKQLSVDMDAFEQCRQKA 449
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 24/120 (20%)
Query: 307 YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQ 366
+A+ GQ+ + FVDS+ SG + ++LD++NFYAEQGGQIYD G + + DE
Sbjct: 504 FAKCEGQVL--ALLKEGTFVDSLYSGDKGAVILDRTNFYAEQGGQIYDTGVLTKIGDEGA 561
Query: 367 IELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTAR 426
+F +SN++ + V L+ ++ + +GD+L ID R
Sbjct: 562 ----------------------EFEVSNVQMRGGYVVLVGSVEGNISIGDRLLQAIDEFR 599
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 236 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGT 277
FVDS+ SG + ++LD++NFYAEQGGQIYD G + + DEG
Sbjct: 520 FVDSLYSGDKGAVILDRTNFYAEQGGQIYDTGVLTKIGDEGA 561
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
EG V+ L FVDS+ SG + ++LD++NFYAEQGGQIYD G ++
Sbjct: 508 EGQVLALLKEGTFVDSLYSGDKGAVILDRTNFYAEQGGQIYDTGVLT 554
>gi|156838512|ref|XP_001642960.1| hypothetical protein Kpol_1071p9 [Vanderwaltozyma polyspora DSM
70294]
gi|156113543|gb|EDO15102.1| hypothetical protein Kpol_1071p9 [Vanderwaltozyma polyspora DSM
70294]
Length = 957
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 74/138 (53%), Gaps = 26/138 (18%)
Query: 324 QFVD-SVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
+F+D + + G++LDK+ FYAEQGGQIYD G +I ++G
Sbjct: 514 EFLDVAADKDKKYGVILDKTCFYAEQGGQIYDNGKLI-----------------IDGK-- 554
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F++ N+++ + + TL L DK+ D RR PI +NHT THILN
Sbjct: 555 -----TEFNVENVQEFNGYILHIGTLMDGKLSTNDKVVASFDELRRFPIRNNHTGTHILN 609
Query: 442 HALRFVLGPEADQKGSLV 459
ALR VLG + +QKGSLV
Sbjct: 610 FALRDVLGKDVEQKGSLV 627
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/47 (59%), Positives = 36/47 (76%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+SK L G WRLYDTYGFPVDLT+LM +E GL++D+ +E AKK +
Sbjct: 411 DSKTLDGLQVWRLYDTYGFPVDLTELMAQELGLNIDVPGFERAKKDS 457
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVD-SVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
LR +F+D + + G++LDK+ FYAEQGGQIYD G +I
Sbjct: 507 LRIHDGSEFLDVAADKDKKYGVILDKTCFYAEQGGQIYDNGKLI 550
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 276 GTVVGLRYNKQFVD-SVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
TV+ + +F+D + + G++LDK+ FYAEQGGQIYD G
Sbjct: 504 ATVLRIHDGSEFLDVAADKDKKYGVILDKTCFYAEQGGQIYDNG 547
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 54 KKAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQS 113
+K +P E S+EFCGGTH+A + I E IAKG ++ F +
Sbjct: 702 EKILEDPTETNSSEFSIEFCGGTHVANTEDIQKLAIIEETGIAKGIRRITAVTGPEAFNA 761
Query: 114 H 114
Sbjct: 762 Q 762
>gi|146312813|ref|YP_001177887.1| alanyl-tRNA synthetase [Enterobacter sp. 638]
gi|205830088|sp|A4WDQ6.1|SYA_ENT38 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|145319689|gb|ABP61836.1| alanyl-tRNA synthetase [Enterobacter sp. 638]
Length = 875
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDS+S+G +A ++LDK+ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDSISAGQDAVVVLDKTPFYAESGGQVGDKG-------------------ELKGNGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + L S +L+VG+ ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVSDTQKYGQAIGHIGKLASGSLKVGEGVQAEVDEARRERIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RDVLGTHVAQKGSLV 589
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNA 448
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++++ EF G L + V + + ++I+ G + V + G + D
Sbjct: 449 MIRVDSASEFQGYDRLELNAKVTALFVDGKAVDSISAGQDAVVVLDKTPFYAESGGQVGD 508
Query: 121 E 121
+
Sbjct: 509 K 509
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAG 336
V L + + VDS+S+G +A ++LDK+ FYAE GGQ+ D+G + F +VS + G
Sbjct: 470 VTALFVDGKAVDSISAGQDAVVVLDKTPFYAESGGQVGDKGELKGNGFSFAVSDTQKYG 528
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VDS+S+G +A ++LDK+ FYAE GGQ+ D+G + G
Sbjct: 480 VDSISAGQDAVVVLDKTPFYAESGGQVGDKGELKG 514
>gi|367017930|ref|XP_003683463.1| hypothetical protein TDEL_0H03930 [Torulaspora delbrueckii]
gi|359751127|emb|CCE94252.1| hypothetical protein TDEL_0H03930 [Torulaspora delbrueckii]
Length = 956
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/140 (39%), Positives = 73/140 (52%), Gaps = 30/140 (21%)
Query: 324 QFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
QFV+ ++ G + GI+LDK+ FYAEQGGQ YD G ++ ++GS
Sbjct: 512 QFVNEITEPGKKYGIILDKTCFYAEQGGQEYDMGKIV-----------------IDGSA- 553
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHTATHI 439
+F + N++ V HT L L + DK+ D RR PI +NHT THI
Sbjct: 554 ------EFDVDNVQLYNGFV--FHTGTLLEGKLSINDKIIASYDELRRFPIRNNHTGTHI 605
Query: 440 LNHALRFVLGPEADQKGSLV 459
LN+ L LG E DQKGSLV
Sbjct: 606 LNYGLLETLGTEVDQKGSLV 625
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
+K L G WRLYDTYGFPVDLT+LM EEKGL++D +E AK+++
Sbjct: 410 NKTLDGLQVWRLYDTYGFPVDLTELMAEEKGLTIDGPGFEKAKQES 455
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 52/106 (49%), Gaps = 22/106 (20%)
Query: 12 KVLPGDVAWRLY-------DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
K +P D+A +Y +TY PV + + G VD E+ E+ P S+
Sbjct: 665 KDVPLDLARSIYNVRAVFGETYPDPVRVVSV-----GRPVD-ELLEN--------PASEE 710
Query: 65 GMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ S+EFCGGTH+A + +F I E IAKG IV+ GS+
Sbjct: 711 WGKYSIEFCGGTHVAKTSDIREFVILEESGIAKGIRRIVAVTGSEA 756
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVS-SGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
LR QFV+ ++ G + GI+LDK+ FYAEQGGQ YD G ++
Sbjct: 505 LRLFDGSQFVNEITEPGKKYGIILDKTCFYAEQGGQEYDMGKIV 548
>gi|420276696|ref|ZP_14778978.1| alanine--tRNA ligase [Escherichia coli PA40]
gi|421825504|ref|ZP_16260859.1| alanine--tRNA ligase [Escherichia coli FRIK920]
gi|424091664|ref|ZP_17827598.1| alanine--tRNA ligase [Escherichia coli FRIK1996]
gi|424104529|ref|ZP_17839292.1| alanine--tRNA ligase [Escherichia coli FRIK1990]
gi|424469968|ref|ZP_17919791.1| alanine--tRNA ligase [Escherichia coli PA41]
gi|424494997|ref|ZP_17942696.1| alanine--tRNA ligase [Escherichia coli TW09195]
gi|425181555|ref|ZP_18579251.1| alanine--tRNA ligase [Escherichia coli FRIK1999]
gi|425194595|ref|ZP_18591364.1| alanine--tRNA ligase [Escherichia coli NE1487]
gi|425207454|ref|ZP_18603251.1| alanine--tRNA ligase [Escherichia coli FRIK2001]
gi|425244281|ref|ZP_18637587.1| alanine--tRNA ligase [Escherichia coli MA6]
gi|428948377|ref|ZP_19020657.1| alanine--tRNA ligase [Escherichia coli 88.1467]
gi|428972891|ref|ZP_19043229.1| alanine--tRNA ligase [Escherichia coli 90.0039]
gi|429003307|ref|ZP_19071428.1| alanine--tRNA ligase [Escherichia coli 95.0183]
gi|429034023|ref|ZP_19099548.1| alanine--tRNA ligase [Escherichia coli 96.0939]
gi|429068561|ref|ZP_19132026.1| alanine--tRNA ligase [Escherichia coli 99.0672]
gi|390640284|gb|EIN19748.1| alanine--tRNA ligase [Escherichia coli FRIK1996]
gi|390662559|gb|EIN40148.1| alanine--tRNA ligase [Escherichia coli FRIK1990]
gi|390757044|gb|EIO26533.1| alanine--tRNA ligase [Escherichia coli PA40]
gi|390766023|gb|EIO35166.1| alanine--tRNA ligase [Escherichia coli PA41]
gi|390828560|gb|EIO94220.1| alanine--tRNA ligase [Escherichia coli TW09195]
gi|408065597|gb|EKH00067.1| alanine--tRNA ligase [Escherichia coli FRIK920]
gi|408096550|gb|EKH29485.1| alanine--tRNA ligase [Escherichia coli FRIK1999]
gi|408107697|gb|EKH39767.1| alanine--tRNA ligase [Escherichia coli NE1487]
gi|408120140|gb|EKH51164.1| alanine--tRNA ligase [Escherichia coli FRIK2001]
gi|408158757|gb|EKH86860.1| alanine--tRNA ligase [Escherichia coli MA6]
gi|427206934|gb|EKV77112.1| alanine--tRNA ligase [Escherichia coli 88.1467]
gi|427227158|gb|EKV95738.1| alanine--tRNA ligase [Escherichia coli 90.0039]
gi|427259718|gb|EKW25750.1| alanine--tRNA ligase [Escherichia coli 95.0183]
gi|427282108|gb|EKW46381.1| alanine--tRNA ligase [Escherichia coli 96.0939]
gi|427318553|gb|EKW80416.1| alanine--tRNA ligase [Escherichia coli 99.0672]
Length = 784
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 29/153 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS +V + KY
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FSFVVE-DTQKYGQA 438
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I L+ + +L+VGD ++ +D ARR I NH+ATH+++ ALR
Sbjct: 439 IGHIGKLA---------------AGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALR 483
Query: 446 FVLGPEADQKGSL----VYRYHL-HENIMECEE 473
VLG QKGSL V R+ H M+ EE
Sbjct: 484 QVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|417629992|ref|ZP_12280228.1| alanyl-tRNA synthetase [Escherichia coli STEC_MHI813]
gi|345371563|gb|EGX03532.1| alanyl-tRNA synthetase [Escherichia coli STEC_MHI813]
Length = 784
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 29/153 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS +V + KY
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FSFVVE-DTQKYGQA 438
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I L+ + +L+VGD ++ +D ARR I NH+ATH+++ ALR
Sbjct: 439 IGHIGKLA---------------AGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALR 483
Query: 446 FVLGPEADQKGSL----VYRYHL-HENIMECEE 473
VLG QKGSL V R+ H M+ EE
Sbjct: 484 QVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|197284276|ref|YP_002150148.1| alanyl-tRNA synthetase [Proteus mirabilis HI4320]
gi|227357820|ref|ZP_03842168.1| alanyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
gi|425073315|ref|ZP_18476421.1| alanyl-tRNA synthetase [Proteus mirabilis WGLW4]
gi|194681763|emb|CAR40964.1| alanyl-tRNA synthetase [Proteus mirabilis HI4320]
gi|227161930|gb|EEI46948.1| alanyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
gi|404595293|gb|EKA95838.1| alanyl-tRNA synthetase [Proteus mirabilis WGLW4]
Length = 875
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 43/216 (19%)
Query: 258 EQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILL---DKSNF----YAEQ 310
E+ ++ +EGF + + ++ K+ +S GT+ L+ +S+F + EQ
Sbjct: 415 ERNIKVDEEGFELAMEEQ--------RKRARESSGFGTDYNELIKVDSRSDFSGYDHNEQ 466
Query: 311 GGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELW 370
G I N Q V + +G E I LDK+ FYAE GGQ+ D+G +IG +
Sbjct: 467 QGTI--NAIFHNGQTVTELKAGEEGIIFLDKTAFYAESGGQVGDKGLLIGKDS------- 517
Query: 371 FSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLL-HTLSHTLRVGDKLKLHIDTARRRP 429
QF +++ +K K + + +S + V K+ ID ARR
Sbjct: 518 ------------------QFEVTDTQKYGKAIGHIGKVISGSFIVNHKINAVIDVARRDA 559
Query: 430 IMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
I NH+ATH+L+ ALR VLG QKGSLV +L
Sbjct: 560 IRLNHSATHLLHAALRQVLGTHVTQKGSLVNDKYLR 595
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMET 68
L G+ A+RLYDTYGFP+DLT + E+ + VD E +E A ++ + +G T
Sbjct: 389 TLAGETAFRLYDTYGFPLDLTADVCRERNIKVDEEGFELAMEEQRKRARESSGFGT 444
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 232 YNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
+N Q V + +G E I LDK+ FYAE GGQ+ D+G +IG
Sbjct: 475 HNGQTVTELKAGEEGIIFLDKTAFYAESGGQVGDKGLLIG 514
>gi|417673583|ref|ZP_12323033.1| alanyl-tRNA synthetase [Shigella dysenteriae 155-74]
gi|419137828|ref|ZP_13682619.1| alanyl-tRNA synthetase [Escherichia coli DEC5E]
gi|420271219|ref|ZP_14773573.1| alanine--tRNA ligase [Escherichia coli PA22]
gi|420282471|ref|ZP_14784704.1| alanine--tRNA ligase [Escherichia coli TW06591]
gi|420288040|ref|ZP_14790224.1| alanine--tRNA ligase [Escherichia coli TW10246]
gi|420293692|ref|ZP_14795807.1| alanine--tRNA ligase [Escherichia coli TW11039]
gi|420299608|ref|ZP_14801654.1| alanine--tRNA ligase [Escherichia coli TW09109]
gi|420305809|ref|ZP_14807799.1| alanine--tRNA ligase [Escherichia coli TW10119]
gi|420311064|ref|ZP_14812994.1| alanine--tRNA ligase [Escherichia coli EC1738]
gi|420316992|ref|ZP_14818865.1| alanine--tRNA ligase [Escherichia coli EC1734]
gi|420348796|ref|ZP_14850178.1| alanyl-tRNA synthetase [Shigella boydii 965-58]
gi|421813675|ref|ZP_16249387.1| alanine--tRNA ligase [Escherichia coli 8.0416]
gi|421819497|ref|ZP_16254988.1| alanine--tRNA ligase [Escherichia coli 10.0821]
gi|421832200|ref|ZP_16267484.1| alanine--tRNA ligase [Escherichia coli PA7]
gi|423726484|ref|ZP_17700491.1| alanine--tRNA ligase [Escherichia coli PA31]
gi|424078789|ref|ZP_17815770.1| alanine--tRNA ligase [Escherichia coli FDA505]
gi|424085247|ref|ZP_17821744.1| alanine--tRNA ligase [Escherichia coli FDA517]
gi|424098292|ref|ZP_17833596.1| alanine--tRNA ligase [Escherichia coli FRIK1985]
gi|424111190|ref|ZP_17845426.1| alanine--tRNA ligase [Escherichia coli 93-001]
gi|424117125|ref|ZP_17850964.1| alanine--tRNA ligase [Escherichia coli PA3]
gi|424123305|ref|ZP_17856627.1| alanine--tRNA ligase [Escherichia coli PA5]
gi|424129467|ref|ZP_17862375.1| alanine--tRNA ligase [Escherichia coli PA9]
gi|424135776|ref|ZP_17868239.1| alanine--tRNA ligase [Escherichia coli PA10]
gi|424142325|ref|ZP_17874207.1| alanine--tRNA ligase [Escherichia coli PA14]
gi|424148740|ref|ZP_17880116.1| alanine--tRNA ligase [Escherichia coli PA15]
gi|424154566|ref|ZP_17885516.1| alanine--tRNA ligase [Escherichia coli PA24]
gi|424252409|ref|ZP_17891075.1| alanine--tRNA ligase [Escherichia coli PA25]
gi|424330445|ref|ZP_17896982.1| alanine--tRNA ligase [Escherichia coli PA28]
gi|424451003|ref|ZP_17902700.1| alanine--tRNA ligase [Escherichia coli PA32]
gi|424457201|ref|ZP_17908333.1| alanine--tRNA ligase [Escherichia coli PA33]
gi|424463645|ref|ZP_17914068.1| alanine--tRNA ligase [Escherichia coli PA39]
gi|424476488|ref|ZP_17925806.1| alanine--tRNA ligase [Escherichia coli PA42]
gi|424482248|ref|ZP_17931228.1| alanine--tRNA ligase [Escherichia coli TW07945]
gi|424488415|ref|ZP_17936977.1| alanine--tRNA ligase [Escherichia coli TW09098]
gi|424501775|ref|ZP_17948672.1| alanine--tRNA ligase [Escherichia coli EC4203]
gi|424508022|ref|ZP_17954419.1| alanine--tRNA ligase [Escherichia coli EC4196]
gi|424515354|ref|ZP_17960027.1| alanine--tRNA ligase [Escherichia coli TW14313]
gi|424521568|ref|ZP_17965695.1| alanine--tRNA ligase [Escherichia coli TW14301]
gi|424527456|ref|ZP_17971173.1| alanine--tRNA ligase [Escherichia coli EC4421]
gi|424533609|ref|ZP_17976958.1| alanine--tRNA ligase [Escherichia coli EC4422]
gi|424539667|ref|ZP_17982611.1| alanine--tRNA ligase [Escherichia coli EC4013]
gi|424545763|ref|ZP_17988162.1| alanine--tRNA ligase [Escherichia coli EC4402]
gi|424552001|ref|ZP_17993857.1| alanine--tRNA ligase [Escherichia coli EC4439]
gi|424558181|ref|ZP_17999598.1| alanine--tRNA ligase [Escherichia coli EC4436]
gi|424564524|ref|ZP_18005528.1| alanine--tRNA ligase [Escherichia coli EC4437]
gi|424570660|ref|ZP_18011215.1| alanine--tRNA ligase [Escherichia coli EC4448]
gi|424576817|ref|ZP_18016884.1| alanine--tRNA ligase [Escherichia coli EC1845]
gi|424582644|ref|ZP_18022291.1| alanine--tRNA ligase [Escherichia coli EC1863]
gi|425099318|ref|ZP_18502050.1| alanine--tRNA ligase [Escherichia coli 3.4870]
gi|425105411|ref|ZP_18507730.1| alanine--tRNA ligase [Escherichia coli 5.2239]
gi|425111429|ref|ZP_18513350.1| alanine--tRNA ligase [Escherichia coli 6.0172]
gi|425127351|ref|ZP_18528520.1| alanine--tRNA ligase [Escherichia coli 8.0586]
gi|425133085|ref|ZP_18533935.1| alanine--tRNA ligase [Escherichia coli 8.2524]
gi|425145379|ref|ZP_18545377.1| alanine--tRNA ligase [Escherichia coli 10.0869]
gi|425151489|ref|ZP_18551104.1| alanine--tRNA ligase [Escherichia coli 88.0221]
gi|425157365|ref|ZP_18556629.1| alanine--tRNA ligase [Escherichia coli PA34]
gi|425163715|ref|ZP_18562602.1| alanine--tRNA ligase [Escherichia coli FDA506]
gi|425169462|ref|ZP_18567936.1| alanine--tRNA ligase [Escherichia coli FDA507]
gi|425175525|ref|ZP_18573645.1| alanine--tRNA ligase [Escherichia coli FDA504]
gi|425187821|ref|ZP_18585096.1| alanine--tRNA ligase [Escherichia coli FRIK1997]
gi|425201069|ref|ZP_18597278.1| alanine--tRNA ligase [Escherichia coli NE037]
gi|425213210|ref|ZP_18608612.1| alanine--tRNA ligase [Escherichia coli PA4]
gi|425219332|ref|ZP_18614298.1| alanine--tRNA ligase [Escherichia coli PA23]
gi|425225880|ref|ZP_18620348.1| alanine--tRNA ligase [Escherichia coli PA49]
gi|425232142|ref|ZP_18626183.1| alanine--tRNA ligase [Escherichia coli PA45]
gi|425250446|ref|ZP_18643388.1| alanine--tRNA ligase [Escherichia coli 5905]
gi|425256269|ref|ZP_18648788.1| alanine--tRNA ligase [Escherichia coli CB7326]
gi|425262531|ref|ZP_18654538.1| alanine--tRNA ligase [Escherichia coli EC96038]
gi|425268533|ref|ZP_18660164.1| alanine--tRNA ligase [Escherichia coli 5412]
gi|425312669|ref|ZP_18701852.1| alanine--tRNA ligase [Escherichia coli EC1735]
gi|425318657|ref|ZP_18707448.1| alanine--tRNA ligase [Escherichia coli EC1736]
gi|425324733|ref|ZP_18713101.1| alanine--tRNA ligase [Escherichia coli EC1737]
gi|425331097|ref|ZP_18718950.1| alanine--tRNA ligase [Escherichia coli EC1846]
gi|425337275|ref|ZP_18724645.1| alanine--tRNA ligase [Escherichia coli EC1847]
gi|425343610|ref|ZP_18730501.1| alanine--tRNA ligase [Escherichia coli EC1848]
gi|425349415|ref|ZP_18735886.1| alanine--tRNA ligase [Escherichia coli EC1849]
gi|425355717|ref|ZP_18741785.1| alanine--tRNA ligase [Escherichia coli EC1850]
gi|425367869|ref|ZP_18753019.1| alanine--tRNA ligase [Escherichia coli EC1862]
gi|425374203|ref|ZP_18758847.1| alanine--tRNA ligase [Escherichia coli EC1864]
gi|425387097|ref|ZP_18770656.1| alanine--tRNA ligase [Escherichia coli EC1866]
gi|425393749|ref|ZP_18776858.1| alanine--tRNA ligase [Escherichia coli EC1868]
gi|425399885|ref|ZP_18782592.1| alanine--tRNA ligase [Escherichia coli EC1869]
gi|425405972|ref|ZP_18788195.1| alanine--tRNA ligase [Escherichia coli EC1870]
gi|425412361|ref|ZP_18794125.1| alanine--tRNA ligase [Escherichia coli NE098]
gi|425418687|ref|ZP_18799958.1| alanine--tRNA ligase [Escherichia coli FRIK523]
gi|425429945|ref|ZP_18810557.1| alanine--tRNA ligase [Escherichia coli 0.1304]
gi|428954459|ref|ZP_19026257.1| alanine--tRNA ligase [Escherichia coli 88.1042]
gi|428960436|ref|ZP_19031741.1| alanine--tRNA ligase [Escherichia coli 89.0511]
gi|428967054|ref|ZP_19037773.1| alanine--tRNA ligase [Escherichia coli 90.0091]
gi|428979265|ref|ZP_19049088.1| alanine--tRNA ligase [Escherichia coli 90.2281]
gi|428991173|ref|ZP_19060164.1| alanine--tRNA ligase [Escherichia coli 93.0056]
gi|428997046|ref|ZP_19065644.1| alanine--tRNA ligase [Escherichia coli 94.0618]
gi|429009384|ref|ZP_19076889.1| alanine--tRNA ligase [Escherichia coli 95.1288]
gi|429015939|ref|ZP_19082832.1| alanine--tRNA ligase [Escherichia coli 95.0943]
gi|429021765|ref|ZP_19088290.1| alanine--tRNA ligase [Escherichia coli 96.0428]
gi|429027836|ref|ZP_19093840.1| alanine--tRNA ligase [Escherichia coli 96.0427]
gi|429040103|ref|ZP_19105208.1| alanine--tRNA ligase [Escherichia coli 96.0932]
gi|429046189|ref|ZP_19110903.1| alanine--tRNA ligase [Escherichia coli 96.0107]
gi|429051384|ref|ZP_19115952.1| alanine--tRNA ligase [Escherichia coli 97.0003]
gi|429056777|ref|ZP_19121095.1| alanine--tRNA ligase [Escherichia coli 97.1742]
gi|429062276|ref|ZP_19126290.1| alanine--tRNA ligase [Escherichia coli 97.0007]
gi|429079720|ref|ZP_19142855.1| alanine--tRNA ligase [Escherichia coli 99.0713]
gi|429827722|ref|ZP_19358764.1| alanine--tRNA ligase [Escherichia coli 96.0109]
gi|429834089|ref|ZP_19364430.1| alanine--tRNA ligase [Escherichia coli 97.0010]
gi|444959577|ref|ZP_21277429.1| alanine--tRNA ligase [Escherichia coli 99.1753]
gi|444986794|ref|ZP_21303574.1| alanine--tRNA ligase [Escherichia coli PA11]
gi|445002975|ref|ZP_21319364.1| alanine--tRNA ligase [Escherichia coli PA2]
gi|332088620|gb|EGI93733.1| alanyl-tRNA synthetase [Shigella dysenteriae 155-74]
gi|377982248|gb|EHV45500.1| alanyl-tRNA synthetase [Escherichia coli DEC5E]
gi|390642167|gb|EIN21585.1| alanine--tRNA ligase [Escherichia coli FDA517]
gi|390642436|gb|EIN21831.1| alanine--tRNA ligase [Escherichia coli FDA505]
gi|390659108|gb|EIN36875.1| alanine--tRNA ligase [Escherichia coli 93-001]
gi|390660396|gb|EIN38102.1| alanine--tRNA ligase [Escherichia coli FRIK1985]
gi|390675996|gb|EIN52111.1| alanine--tRNA ligase [Escherichia coli PA3]
gi|390679516|gb|EIN55411.1| alanine--tRNA ligase [Escherichia coli PA5]
gi|390682972|gb|EIN58709.1| alanine--tRNA ligase [Escherichia coli PA9]
gi|390695111|gb|EIN69663.1| alanine--tRNA ligase [Escherichia coli PA10]
gi|390699513|gb|EIN73856.1| alanine--tRNA ligase [Escherichia coli PA15]
gi|390699943|gb|EIN74279.1| alanine--tRNA ligase [Escherichia coli PA14]
gi|390713555|gb|EIN86493.1| alanine--tRNA ligase [Escherichia coli PA22]
gi|390721132|gb|EIN93833.1| alanine--tRNA ligase [Escherichia coli PA25]
gi|390722770|gb|EIN95407.1| alanine--tRNA ligase [Escherichia coli PA24]
gi|390726232|gb|EIN98704.1| alanine--tRNA ligase [Escherichia coli PA28]
gi|390740766|gb|EIO11884.1| alanine--tRNA ligase [Escherichia coli PA31]
gi|390741406|gb|EIO12478.1| alanine--tRNA ligase [Escherichia coli PA32]
gi|390744274|gb|EIO15176.1| alanine--tRNA ligase [Escherichia coli PA33]
gi|390766773|gb|EIO35884.1| alanine--tRNA ligase [Escherichia coli PA39]
gi|390767312|gb|EIO36395.1| alanine--tRNA ligase [Escherichia coli PA42]
gi|390780632|gb|EIO48332.1| alanine--tRNA ligase [Escherichia coli TW06591]
gi|390788427|gb|EIO55893.1| alanine--tRNA ligase [Escherichia coli TW07945]
gi|390788602|gb|EIO56067.1| alanine--tRNA ligase [Escherichia coli TW10246]
gi|390795306|gb|EIO62590.1| alanine--tRNA ligase [Escherichia coli TW11039]
gi|390803804|gb|EIO70792.1| alanine--tRNA ligase [Escherichia coli TW09098]
gi|390806016|gb|EIO72938.1| alanine--tRNA ligase [Escherichia coli TW09109]
gi|390815074|gb|EIO81623.1| alanine--tRNA ligase [Escherichia coli TW10119]
gi|390824720|gb|EIO90677.1| alanine--tRNA ligase [Escherichia coli EC4203]
gi|390829917|gb|EIO95502.1| alanine--tRNA ligase [Escherichia coli EC4196]
gi|390844933|gb|EIP08620.1| alanine--tRNA ligase [Escherichia coli TW14313]
gi|390845221|gb|EIP08895.1| alanine--tRNA ligase [Escherichia coli TW14301]
gi|390849742|gb|EIP13164.1| alanine--tRNA ligase [Escherichia coli EC4421]
gi|390860229|gb|EIP22551.1| alanine--tRNA ligase [Escherichia coli EC4422]
gi|390864305|gb|EIP26413.1| alanine--tRNA ligase [Escherichia coli EC4013]
gi|390869750|gb|EIP31378.1| alanine--tRNA ligase [Escherichia coli EC4402]
gi|390877438|gb|EIP38360.1| alanine--tRNA ligase [Escherichia coli EC4439]
gi|390882841|gb|EIP43323.1| alanine--tRNA ligase [Escherichia coli EC4436]
gi|390892127|gb|EIP51715.1| alanine--tRNA ligase [Escherichia coli EC4437]
gi|390894729|gb|EIP54223.1| alanine--tRNA ligase [Escherichia coli EC4448]
gi|390899259|gb|EIP58507.1| alanine--tRNA ligase [Escherichia coli EC1738]
gi|390907249|gb|EIP66118.1| alanine--tRNA ligase [Escherichia coli EC1734]
gi|390917770|gb|EIP76186.1| alanine--tRNA ligase [Escherichia coli EC1863]
gi|390919266|gb|EIP77620.1| alanine--tRNA ligase [Escherichia coli EC1845]
gi|391267837|gb|EIQ26768.1| alanyl-tRNA synthetase [Shigella boydii 965-58]
gi|408063685|gb|EKG98174.1| alanine--tRNA ligase [Escherichia coli PA7]
gi|408068793|gb|EKH03207.1| alanine--tRNA ligase [Escherichia coli PA34]
gi|408078054|gb|EKH12227.1| alanine--tRNA ligase [Escherichia coli FDA506]
gi|408081440|gb|EKH15447.1| alanine--tRNA ligase [Escherichia coli FDA507]
gi|408090120|gb|EKH23397.1| alanine--tRNA ligase [Escherichia coli FDA504]
gi|408102938|gb|EKH35323.1| alanine--tRNA ligase [Escherichia coli FRIK1997]
gi|408114263|gb|EKH45825.1| alanine--tRNA ligase [Escherichia coli NE037]
gi|408126443|gb|EKH57003.1| alanine--tRNA ligase [Escherichia coli PA4]
gi|408136489|gb|EKH66228.1| alanine--tRNA ligase [Escherichia coli PA23]
gi|408139228|gb|EKH68859.1| alanine--tRNA ligase [Escherichia coli PA49]
gi|408145218|gb|EKH74396.1| alanine--tRNA ligase [Escherichia coli PA45]
gi|408162675|gb|EKH90562.1| alanine--tRNA ligase [Escherichia coli 5905]
gi|408172336|gb|EKH99409.1| alanine--tRNA ligase [Escherichia coli CB7326]
gi|408179115|gb|EKI05803.1| alanine--tRNA ligase [Escherichia coli EC96038]
gi|408181967|gb|EKI08501.1| alanine--tRNA ligase [Escherichia coli 5412]
gi|408226013|gb|EKI49673.1| alanine--tRNA ligase [Escherichia coli EC1735]
gi|408237264|gb|EKI60124.1| alanine--tRNA ligase [Escherichia coli EC1736]
gi|408241373|gb|EKI64020.1| alanine--tRNA ligase [Escherichia coli EC1737]
gi|408245912|gb|EKI68260.1| alanine--tRNA ligase [Escherichia coli EC1846]
gi|408254393|gb|EKI75916.1| alanine--tRNA ligase [Escherichia coli EC1847]
gi|408257954|gb|EKI79242.1| alanine--tRNA ligase [Escherichia coli EC1848]
gi|408264762|gb|EKI85551.1| alanine--tRNA ligase [Escherichia coli EC1849]
gi|408273156|gb|EKI93222.1| alanine--tRNA ligase [Escherichia coli EC1850]
gi|408285109|gb|EKJ04159.1| alanine--tRNA ligase [Escherichia coli EC1862]
gi|408289977|gb|EKJ08714.1| alanine--tRNA ligase [Escherichia coli EC1864]
gi|408306527|gb|EKJ23893.1| alanine--tRNA ligase [Escherichia coli EC1868]
gi|408306827|gb|EKJ24189.1| alanine--tRNA ligase [Escherichia coli EC1866]
gi|408317613|gb|EKJ33843.1| alanine--tRNA ligase [Escherichia coli EC1869]
gi|408323670|gb|EKJ39631.1| alanine--tRNA ligase [Escherichia coli EC1870]
gi|408325594|gb|EKJ41469.1| alanine--tRNA ligase [Escherichia coli NE098]
gi|408335533|gb|EKJ50371.1| alanine--tRNA ligase [Escherichia coli FRIK523]
gi|408345183|gb|EKJ59525.1| alanine--tRNA ligase [Escherichia coli 0.1304]
gi|408547943|gb|EKK25328.1| alanine--tRNA ligase [Escherichia coli 3.4870]
gi|408548729|gb|EKK26110.1| alanine--tRNA ligase [Escherichia coli 5.2239]
gi|408549418|gb|EKK26778.1| alanine--tRNA ligase [Escherichia coli 6.0172]
gi|408567430|gb|EKK43486.1| alanine--tRNA ligase [Escherichia coli 8.0586]
gi|408580488|gb|EKK55892.1| alanine--tRNA ligase [Escherichia coli 8.2524]
gi|408590582|gb|EKK65056.1| alanine--tRNA ligase [Escherichia coli 10.0869]
gi|408595621|gb|EKK69849.1| alanine--tRNA ligase [Escherichia coli 88.0221]
gi|408600042|gb|EKK73901.1| alanine--tRNA ligase [Escherichia coli 8.0416]
gi|408611492|gb|EKK84852.1| alanine--tRNA ligase [Escherichia coli 10.0821]
gi|427203206|gb|EKV73511.1| alanine--tRNA ligase [Escherichia coli 88.1042]
gi|427205388|gb|EKV75637.1| alanine--tRNA ligase [Escherichia coli 89.0511]
gi|427220025|gb|EKV88969.1| alanine--tRNA ligase [Escherichia coli 90.0091]
gi|427223075|gb|EKV91834.1| alanine--tRNA ligase [Escherichia coli 90.2281]
gi|427240338|gb|EKW07791.1| alanine--tRNA ligase [Escherichia coli 93.0056]
gi|427244563|gb|EKW11876.1| alanine--tRNA ligase [Escherichia coli 94.0618]
gi|427260164|gb|EKW26155.1| alanine--tRNA ligase [Escherichia coli 95.0943]
gi|427263331|gb|EKW29090.1| alanine--tRNA ligase [Escherichia coli 95.1288]
gi|427275261|gb|EKW39876.1| alanine--tRNA ligase [Escherichia coli 96.0428]
gi|427278114|gb|EKW42604.1| alanine--tRNA ligase [Escherichia coli 96.0427]
gi|427290616|gb|EKW54074.1| alanine--tRNA ligase [Escherichia coli 96.0932]
gi|427297930|gb|EKW60954.1| alanine--tRNA ligase [Escherichia coli 96.0107]
gi|427299655|gb|EKW62624.1| alanine--tRNA ligase [Escherichia coli 97.0003]
gi|427311570|gb|EKW73766.1| alanine--tRNA ligase [Escherichia coli 97.1742]
gi|427314320|gb|EKW76376.1| alanine--tRNA ligase [Escherichia coli 97.0007]
gi|427328018|gb|EKW89386.1| alanine--tRNA ligase [Escherichia coli 99.0713]
gi|429252735|gb|EKY37247.1| alanine--tRNA ligase [Escherichia coli 96.0109]
gi|429254529|gb|EKY38940.1| alanine--tRNA ligase [Escherichia coli 97.0010]
gi|444572116|gb|ELV48562.1| alanine--tRNA ligase [Escherichia coli 99.1753]
gi|444591932|gb|ELV67193.1| alanine--tRNA ligase [Escherichia coli PA11]
gi|444614493|gb|ELV88719.1| alanine--tRNA ligase [Escherichia coli PA2]
Length = 784
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 29/153 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS +V + KY
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FSFVVE-DTQKYGQA 438
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I L+ + +L+VGD ++ +D ARR I NH+ATH+++ ALR
Sbjct: 439 IGHIGKLA---------------AGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALR 483
Query: 446 FVLGPEADQKGSL----VYRYHL-HENIMECEE 473
VLG QKGSL V R+ H M+ EE
Sbjct: 484 QVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|417690891|ref|ZP_12340110.1| alanyl-tRNA synthetase [Shigella boydii 5216-82]
gi|332087414|gb|EGI92542.1| alanyl-tRNA synthetase [Shigella boydii 5216-82]
Length = 784
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 29/153 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS +V + KY
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FSFVVE-DTQKYGQA 438
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I L+ + +L+VGD ++ +D ARR I NH+ATH+++ ALR
Sbjct: 439 IGHIGKLA---------------AGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALR 483
Query: 446 FVLGPEADQKGSL----VYRYHL-HENIMECEE 473
VLG QKGSL V R+ H M+ EE
Sbjct: 484 QVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|432802880|ref|ZP_20036836.1| alanyl-tRNA synthetase [Escherichia coli KTE84]
gi|431347409|gb|ELG34297.1| alanyl-tRNA synthetase [Escherichia coli KTE84]
Length = 876
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVSQKGSLV 589
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + S +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKSVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKSVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|425067172|ref|ZP_18470288.1| alanyl-tRNA synthetase [Proteus mirabilis WGLW6]
gi|404601467|gb|EKB01876.1| alanyl-tRNA synthetase [Proteus mirabilis WGLW6]
Length = 875
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 102/216 (47%), Gaps = 43/216 (19%)
Query: 258 EQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILL---DKSNF----YAEQ 310
E+ ++ +EGF + + ++ K+ +S GT+ L+ +S+F + EQ
Sbjct: 415 ERNIKVDEEGFELAMEEQ--------RKRARESSGFGTDYNELIKVDSRSDFSGYDHNEQ 466
Query: 311 GGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELW 370
G I N Q V + +G E I LDK+ FYAE GGQ+ D+G +IG +
Sbjct: 467 QGTI--NAIFHNGQTVTELKAGEEGIIFLDKTAFYAESGGQVGDKGLLIGKDS------- 517
Query: 371 FSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLL-HTLSHTLRVGDKLKLHIDTARRRP 429
QF +++ +K K + + +S + V K+ ID ARR
Sbjct: 518 ------------------QFEVTDTQKYGKAIGHIGKVISGSFIVNHKINAIIDVARRDA 559
Query: 430 IMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
I NH+ATH+L+ ALR VLG QKGSLV +L
Sbjct: 560 IRLNHSATHLLHAALRQVLGTHVTQKGSLVNDKYLR 595
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMET 68
L G+ A+RLYDTYGFP+DLT + E+ + VD E +E A ++ + +G T
Sbjct: 389 TLAGETAFRLYDTYGFPLDLTADVCRERNIKVDEEGFELAMEEQRKRARESSGFGT 444
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%)
Query: 232 YNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
+N Q V + +G E I LDK+ FYAE GGQ+ D+G +IG
Sbjct: 475 HNGQTVTELKAGEEGIIFLDKTAFYAESGGQVGDKGLLIG 514
>gi|410079893|ref|XP_003957527.1| hypothetical protein KAFR_0E02390 [Kazachstania africana CBS 2517]
gi|372464113|emb|CCF58392.1| hypothetical protein KAFR_0E02390 [Kazachstania africana CBS 2517]
Length = 956
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 74/136 (54%), Gaps = 24/136 (17%)
Query: 325 FVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
FV+ +S G + GI+LDK+ FYAEQGGQ YD G ++ ++D ++ + L N
Sbjct: 513 FVNEISEPGKKYGIILDKTCFYAEQGGQEYDTGKIV-IDDVAEFNVENVQLYN------- 564
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
F +L++ K L VGDK+ D RR PI +NHT THILN A
Sbjct: 565 ---GFVFHTGSLEEGK------------LSVGDKIIAAYDELRRFPIKNNHTGTHILNLA 609
Query: 444 LRFVLGPEADQKGSLV 459
L+ LG + DQKGSLV
Sbjct: 610 LKETLGNDVDQKGSLV 625
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQ 63
T A SK L G WRLYDTYGFPVDLT+LM EE+GL +D +E AK+++ E +
Sbjct: 403 TTASQTTSKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQESY-EASKR 461
Query: 64 AGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSY 104
G + GG+ L + +V + +EE +AK + Y
Sbjct: 462 GGKK------GGSDL-IKLNVHELNELNEENVAKTDDKAKY 495
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 1/47 (2%)
Query: 273 NDEGTVVGLRYNKQFVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEG 318
N EGT++ L FV+ +S G + GI+LDK+ FYAEQGGQ YD G
Sbjct: 499 NIEGTILKLHDGSNFVNEISEPGKKYGIILDKTCFYAEQGGQEYDTG 545
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEGFMI 270
L+ FV+ +S G + GI+LDK+ FYAEQGGQ YD G ++
Sbjct: 505 LKLHDGSNFVNEISEPGKKYGIILDKTCFYAEQGGQEYDTGKIV 548
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 51/106 (48%), Gaps = 5/106 (4%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
+ P S+ + SVEFCGGTH+ + F + E IAKG IV+ G++ F++
Sbjct: 704 ANPTSEEWHKYSVEFCGGTHVNKTSDIKYFVVLEESGIAKGIRRIVAVTGTEA-FEAQ-- 760
Query: 117 SINDEMVNKYPSLYRL-FRTVHKQKYVQDALNVSCLSFRGVWEHGM 161
I DE +L F + ++K + + + LS + +H +
Sbjct: 761 RIADEFAEALTRAEQLPFSPIKEKKLKELGVQLGQLSISVITKHEL 806
>gi|354724863|ref|ZP_09039078.1| alanyl-tRNA synthetase [Enterobacter mori LMG 25706]
Length = 875
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDS+S+G +A ++LDK+ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDSISAGQDAVVILDKTPFYAESGGQVGDKG-------------------ELKGNGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
FS+S+ +K + + L S +L+VG+ ++ ++D ARR I NH+ATH+++ AL
Sbjct: 519 ----FSVSDTQKYGQAIGHQGKLVSGSLKVGEGVQANVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RDVLGTHVAQKGSLV 589
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-KGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG 65
+G
Sbjct: 439 SSG 441
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VDS+S+G +A ++LDK+ FYAE GGQ+ D+G + F SVS +
Sbjct: 468 GKVTALFVDGKAVDSISAGQDAVVILDKTPFYAESGGQVGDKGELKGNGFSFSVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VDS+S+G +A ++LDK+ FYAE GGQ+ D+G + G
Sbjct: 480 VDSISAGQDAVVILDKTPFYAESGGQVGDKGELKG 514
>gi|419116071|ref|ZP_13661086.1| alanyl-tRNA synthetase [Escherichia coli DEC5A]
gi|377959423|gb|EHV22919.1| alanyl-tRNA synthetase [Escherichia coli DEC5A]
Length = 808
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 29/153 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS +V + KY
Sbjct: 412 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FSFVVE-DTQKYGQA 462
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I L+ + +L+VGD ++ +D ARR I NH+ATH+++ ALR
Sbjct: 463 IGHIGKLA---------------AGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALR 507
Query: 446 FVLGPEADQKGSL----VYRYHL-HENIMECEE 473
VLG QKGSL V R+ H M+ EE
Sbjct: 508 QVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 540
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 312 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 370
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 371 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 430
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 431 YAESGGQVGDK 441
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 400 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 449
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 412 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 448
>gi|254427911|ref|ZP_05041618.1| alanyl-tRNA synthetase [Alcanivorax sp. DG881]
gi|196194080|gb|EDX89039.1| alanyl-tRNA synthetase [Alcanivorax sp. DG881]
Length = 866
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 29/156 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G E ++L ++ FYAE GGQ+ D G ++G +D
Sbjct: 468 VETLNAGEEGMVVLARTPFYAESGGQVGDTGALMGGDDSET------------------- 508
Query: 386 IFLQFSLSNLKKKKKL-VKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
+F +++ +K++ V + S TL VG K+ ++D RRR +M NH+ATH+++ AL
Sbjct: 509 ---RFLVTDTRKRQAAHVHVGKLESGTLTVGSKVSAYVDVDRRRAVMRNHSATHLMHAAL 565
Query: 445 RFVLGPEADQKGSLVYRYHLH------ENIMECEEE 474
R VLG QKGSLV +L E + E + E
Sbjct: 566 RDVLGEHVQQKGSLVAADYLRFDFSHGEAVSEAQRE 601
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+ KVLPG+V + LYDT+GFP DLT + E+ L+VDM+ +E A AQ E AG
Sbjct: 374 DGKVLPGEVLFNLYDTHGFPPDLTADVARERALTVDMDGFETA-MAAQRERARGAG 428
>gi|358372805|dbj|GAA89407.1| alanyl-tRNA synthetase [Aspergillus kawachii IFO 4308]
Length = 961
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 73/135 (54%), Gaps = 25/135 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
D V G + GI+LD++NFYAEQGGQ D G ++ ++ +S++E+ L + Y L
Sbjct: 519 TDEVPDGEQLGIILDRTNFYAEQGGQENDTGKIV-IDGQSELEVGDVQLY----AGYVLH 573
Query: 386 I-FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F+++ ++ VGD + D RR PI +NHT THILN AL
Sbjct: 574 TGFMKYG-------------------SISVGDTVICEYDELRRWPIRNNHTGTHILNFAL 614
Query: 445 RFVLGPEADQKGSLV 459
R VLG +QKGSLV
Sbjct: 615 RTVLGDGVEQKGSLV 629
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
AK + L G WRLYDT+GFPVDLT++M EE+GL +D +E+A+ +A+ + Q
Sbjct: 407 AKAKGADKLHGADVWRLYDTFGFPVDLTRIMAEERGLQIDDREFEEARSRAKEASKGQK- 465
Query: 66 METSVE 71
+TS E
Sbjct: 466 -KTSAE 470
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
D V G + GI+LD++NFYAEQGGQ D G ++
Sbjct: 519 TDEVPDGEQLGIILDRTNFYAEQGGQENDTGKIV 552
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 288 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
D V G + GI+LD++NFYAEQGGQ D G
Sbjct: 519 TDEVPDGEQLGIILDRTNFYAEQGGQENDTG 549
>gi|419099617|ref|ZP_13644811.1| alanyl-tRNA synthetase [Escherichia coli DEC4D]
gi|444981396|ref|ZP_21298306.1| alanine--tRNA ligase [Escherichia coli ATCC 700728]
gi|377940338|gb|EHV04088.1| alanyl-tRNA synthetase [Escherichia coli DEC4D]
gi|444592235|gb|ELV67494.1| alanine--tRNA ligase [Escherichia coli ATCC 700728]
Length = 839
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 29/153 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS +V + KY
Sbjct: 443 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FSFVVE-DTQKYGQA 493
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I L+ + +L+VGD ++ +D ARR I NH+ATH+++ ALR
Sbjct: 494 IGHIGKLA---------------AGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALR 538
Query: 446 FVLGPEADQKGSL----VYRYHL-HENIMECEE 473
VLG QKGSL V R+ H M+ EE
Sbjct: 539 QVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 571
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 343 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 401
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 402 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 461
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 462 YAESGGQVGDK 472
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 431 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 480
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 443 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 479
>gi|416282440|ref|ZP_11646451.1| Alanyl-tRNA synthetase [Shigella boydii ATCC 9905]
gi|416321845|ref|ZP_11663693.1| Alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
gi|419046854|ref|ZP_13593789.1| alanyl-tRNA synthetase [Escherichia coli DEC3A]
gi|419058404|ref|ZP_13605207.1| alanyl-tRNA synthetase [Escherichia coli DEC3C]
gi|419063898|ref|ZP_13610623.1| alanyl-tRNA synthetase [Escherichia coli DEC3D]
gi|419070847|ref|ZP_13616462.1| alanyl-tRNA synthetase [Escherichia coli DEC3E]
gi|419076746|ref|ZP_13622252.1| alanyl-tRNA synthetase [Escherichia coli DEC3F]
gi|419081870|ref|ZP_13627317.1| alanyl-tRNA synthetase [Escherichia coli DEC4A]
gi|419121744|ref|ZP_13666691.1| alanyl-tRNA synthetase [Escherichia coli DEC5B]
gi|444926257|ref|ZP_21245544.1| alanine--tRNA ligase [Escherichia coli 09BKT078844]
gi|444931959|ref|ZP_21250997.1| alanine--tRNA ligase [Escherichia coli 99.0814]
gi|444937388|ref|ZP_21256164.1| alanine--tRNA ligase [Escherichia coli 99.0815]
gi|444943032|ref|ZP_21261548.1| alanine--tRNA ligase [Escherichia coli 99.0816]
gi|444948524|ref|ZP_21266835.1| alanine--tRNA ligase [Escherichia coli 99.0839]
gi|444954063|ref|ZP_21272155.1| alanine--tRNA ligase [Escherichia coli 99.0848]
gi|444964701|ref|ZP_21282305.1| alanine--tRNA ligase [Escherichia coli 99.1775]
gi|444970716|ref|ZP_21288078.1| alanine--tRNA ligase [Escherichia coli 99.1793]
gi|444976001|ref|ZP_21293120.1| alanine--tRNA ligase [Escherichia coli 99.1805]
gi|444992096|ref|ZP_21308738.1| alanine--tRNA ligase [Escherichia coli PA19]
gi|444997401|ref|ZP_21313898.1| alanine--tRNA ligase [Escherichia coli PA13]
gi|445019416|ref|ZP_21335379.1| alanine--tRNA ligase [Escherichia coli PA8]
gi|445024796|ref|ZP_21340618.1| alanine--tRNA ligase [Escherichia coli 7.1982]
gi|445030218|ref|ZP_21345891.1| alanine--tRNA ligase [Escherichia coli 99.1781]
gi|445035638|ref|ZP_21351169.1| alanine--tRNA ligase [Escherichia coli 99.1762]
gi|445041264|ref|ZP_21356636.1| alanine--tRNA ligase [Escherichia coli PA35]
gi|445052043|ref|ZP_21367084.1| alanine--tRNA ligase [Escherichia coli 95.0083]
gi|320180884|gb|EFW55807.1| Alanyl-tRNA synthetase [Shigella boydii ATCC 9905]
gi|320189025|gb|EFW63684.1| Alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
gi|377892457|gb|EHU56903.1| alanyl-tRNA synthetase [Escherichia coli DEC3A]
gi|377903998|gb|EHU68285.1| alanyl-tRNA synthetase [Escherichia coli DEC3C]
gi|377908882|gb|EHU73091.1| alanyl-tRNA synthetase [Escherichia coli DEC3D]
gi|377910304|gb|EHU74492.1| alanyl-tRNA synthetase [Escherichia coli DEC3E]
gi|377919966|gb|EHU83999.1| alanyl-tRNA synthetase [Escherichia coli DEC3F]
gi|377924841|gb|EHU88782.1| alanyl-tRNA synthetase [Escherichia coli DEC4A]
gi|377964901|gb|EHV28333.1| alanyl-tRNA synthetase [Escherichia coli DEC5B]
gi|444537226|gb|ELV17168.1| alanine--tRNA ligase [Escherichia coli 99.0814]
gi|444538852|gb|ELV18688.1| alanine--tRNA ligase [Escherichia coli 09BKT078844]
gi|444546937|gb|ELV25592.1| alanine--tRNA ligase [Escherichia coli 99.0815]
gi|444556792|gb|ELV34183.1| alanine--tRNA ligase [Escherichia coli 99.0839]
gi|444557257|gb|ELV34611.1| alanine--tRNA ligase [Escherichia coli 99.0816]
gi|444562346|gb|ELV39415.1| alanine--tRNA ligase [Escherichia coli 99.0848]
gi|444576091|gb|ELV52305.1| alanine--tRNA ligase [Escherichia coli 99.1775]
gi|444578513|gb|ELV54567.1| alanine--tRNA ligase [Escherichia coli 99.1793]
gi|444594103|gb|ELV69300.1| alanine--tRNA ligase [Escherichia coli 99.1805]
gi|444605138|gb|ELV79780.1| alanine--tRNA ligase [Escherichia coli PA13]
gi|444605922|gb|ELV80548.1| alanine--tRNA ligase [Escherichia coli PA19]
gi|444628615|gb|ELW02352.1| alanine--tRNA ligase [Escherichia coli PA8]
gi|444637175|gb|ELW10549.1| alanine--tRNA ligase [Escherichia coli 7.1982]
gi|444640227|gb|ELW13509.1| alanine--tRNA ligase [Escherichia coli 99.1781]
gi|444644335|gb|ELW17454.1| alanine--tRNA ligase [Escherichia coli 99.1762]
gi|444653425|gb|ELW26146.1| alanine--tRNA ligase [Escherichia coli PA35]
gi|444662954|gb|ELW35201.1| alanine--tRNA ligase [Escherichia coli 95.0083]
Length = 839
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 29/153 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS +V + KY
Sbjct: 443 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FSFVVE-DTQKYGQA 493
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I L+ + +L+VGD ++ +D ARR I NH+ATH+++ ALR
Sbjct: 494 IGHIGKLA---------------AGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALR 538
Query: 446 FVLGPEADQKGSL----VYRYHL-HENIMECEE 473
VLG QKGSL V R+ H M+ EE
Sbjct: 539 QVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 571
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 343 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 401
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 402 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 461
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 462 YAESGGQVGDK 472
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 431 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 480
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 443 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 479
>gi|416327584|ref|ZP_11667504.1| Alanyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
gi|419052413|ref|ZP_13599280.1| alanyl-tRNA synthetase [Escherichia coli DEC3B]
gi|419110684|ref|ZP_13655738.1| alanyl-tRNA synthetase [Escherichia coli DEC4F]
gi|419132708|ref|ZP_13677542.1| alanyl-tRNA synthetase [Escherichia coli DEC5D]
gi|326342881|gb|EGD66649.1| Alanyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
gi|377891260|gb|EHU55712.1| alanyl-tRNA synthetase [Escherichia coli DEC3B]
gi|377956253|gb|EHV19803.1| alanyl-tRNA synthetase [Escherichia coli DEC4F]
gi|377974133|gb|EHV37461.1| alanyl-tRNA synthetase [Escherichia coli DEC5D]
Length = 840
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 29/153 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS +V + KY
Sbjct: 444 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FSFVVE-DTQKYGQA 494
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I L+ + +L+VGD ++ +D ARR I NH+ATH+++ ALR
Sbjct: 495 IGHIGKLA---------------AGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALR 539
Query: 446 FVLGPEADQKGSL----VYRYHL-HENIMECEE 473
VLG QKGSL V R+ H M+ EE
Sbjct: 540 QVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 572
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 344 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 402
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 403 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 462
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 463 YAESGGQVGDK 473
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 432 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 481
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 444 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 480
>gi|419093686|ref|ZP_13638968.1| alanyl-tRNA synthetase [Escherichia coli DEC4C]
gi|377940799|gb|EHV04545.1| alanyl-tRNA synthetase [Escherichia coli DEC4C]
Length = 833
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 29/153 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS +V + KY
Sbjct: 437 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FSFVVE-DTQKYGQA 487
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I L+ + +L+VGD ++ +D ARR I NH+ATH+++ ALR
Sbjct: 488 IGHIGKLA---------------AGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALR 532
Query: 446 FVLGPEADQKGSL----VYRYHL-HENIMECEE 473
VLG QKGSL V R+ H M+ EE
Sbjct: 533 QVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 565
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 337 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 395
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 396 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 455
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 456 YAESGGQVGDK 466
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 425 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 474
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 437 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 473
>gi|416314700|ref|ZP_11658935.1| Alanyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
gi|326339235|gb|EGD63050.1| Alanyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
Length = 833
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 29/153 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS +V + KY
Sbjct: 437 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FSFVVE-DTQKYGQA 487
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I L+ + +L+VGD ++ +D ARR I NH+ATH+++ ALR
Sbjct: 488 IGHIGKLA---------------AGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALR 532
Query: 446 FVLGPEADQKGSL----VYRYHL-HENIMECEE 473
VLG QKGSL V R+ H M+ EE
Sbjct: 533 QVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 565
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 337 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 395
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 396 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 455
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 456 YAESGGQVGDK 466
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 425 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 474
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 437 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 473
>gi|449471976|ref|XP_004153458.1| PREDICTED: alanine--tRNA ligase-like [Cucumis sativus]
Length = 796
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDS+S+G +A ++LDK+ FYAE GGQ+ D+G L+G+ ++
Sbjct: 559 VDSISAGQDAVVILDKTPFYAESGGQVGDKG-------------------ELKGNGFS-- 597
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
FS+S+ +K + + L S +L+VG+ ++ ++D ARR I NH+ATH+++ AL
Sbjct: 598 ----FSVSDTQKYGQAIGHQGKLVSGSLKVGEGVQANVDEARRARIRLNHSATHLMHAAL 653
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 654 REVLGTHVAQKGSLV 668
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 63/129 (48%), Gaps = 13/129 (10%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
+AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +
Sbjct: 461 LAKL-KGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESS 519
Query: 65 G----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQ 112
G ++++ EF G LA+ +V + + ++I+ G + V +
Sbjct: 520 GFGADYNAMIRVDSASEFKGYEELALTSNVTALFVDGKAVDSISAGQDAVVILDKTPFYA 579
Query: 113 SHSGSINDE 121
G + D+
Sbjct: 580 ESGGQVGDK 588
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 277 TVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAG 336
V L + + VDS+S+G +A ++LDK+ FYAE GGQ+ D+G + F SVS + G
Sbjct: 548 NVTALFVDGKAVDSISAGQDAVVILDKTPFYAESGGQVGDKGELKGNGFSFSVSDTQKYG 607
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VDS+S+G +A ++LDK+ FYAE GGQ+ D+G + G
Sbjct: 559 VDSISAGQDAVVILDKTPFYAESGGQVGDKGELKG 593
>gi|328772364|gb|EGF82402.1| hypothetical protein BATDEDRAFT_32863 [Batrachochytrium
dendrobatidis JAM81]
Length = 965
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 78/142 (54%), Gaps = 28/142 (19%)
Query: 322 NKQFVDSVSSGTEAG---ILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
N +FV+SVSS G ++LDK+NFYAEQGGQ +D G + ++
Sbjct: 507 NGKFVESVSSTNHQGRFGVILDKTNFYAEQGGQQFDTGSL-----------------TVD 549
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTAT 437
GS L+F++ +++ V + L + +L + D + D RR P+ +NHTAT
Sbjct: 550 GS-------LEFAIEDVQVFGGYVLHIGYLKYGSLSLDDSIMCTYDELRRWPLRNNHTAT 602
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H+LN+ LR V+G DQKGSLV
Sbjct: 603 HVLNYGLRSVIGTIVDQKGSLV 624
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%), Gaps = 4/65 (6%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED----AKKKAQSEPESQAGME 67
KV+ G AWRLYDTYGFPVDLT+LM EE GL+VD +E AK++++ E + G+
Sbjct: 407 KVISGADAWRLYDTYGFPVDLTRLMAEENGLTVDEVEFEQEQKIAKERSRGRNEKETGIV 466
Query: 68 TSVEF 72
S++
Sbjct: 467 VSLDI 471
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 4/64 (6%)
Query: 262 QIYDEGFMIGVND-EGTVVGLRYNKQFVDSVSSGTEAG---ILLDKSNFYAEQGGQIYDE 317
Q D+ + G +D V L N +FV+SVSS G ++LDK+NFYAEQGGQ +D
Sbjct: 484 QPTDDQYKYGFDDISSKVKALFVNGKFVESVSSTNHQGRFGVILDKTNFYAEQGGQQFDT 543
Query: 318 GFMS 321
G ++
Sbjct: 544 GSLT 547
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%), Gaps = 10/59 (16%)
Query: 212 GLGDLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAG---ILLDKSNFYAEQGGQIYDEG 267
G D+S FV N +FV+SVSS G ++LDK+NFYAEQGGQ +D G
Sbjct: 493 GFDDISSKVKALFV-------NGKFVESVSSTNHQGRFGVILDKTNFYAEQGGQQFDTG 544
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQSHSGSI 118
+P + ETS+EFCGGTH+ + F I + A+AKG I G G +
Sbjct: 717 DPSNAKWAETSIEFCGGTHVQRTGDIKRFVIIEDSALAKG--IRRIVGVTGDEALKYQKL 774
Query: 119 NDEMVNKYPSLYR----LFRTVHKQ 139
DE K L R LF T K+
Sbjct: 775 ADEFEIKLEQLRRIKGALFETTLKE 799
>gi|417713768|ref|ZP_12362731.1| alanyl-tRNA synthetase [Shigella flexneri K-272]
gi|417718614|ref|ZP_12367507.1| alanyl-tRNA synthetase [Shigella flexneri K-227]
gi|333001033|gb|EGK20603.1| alanyl-tRNA synthetase [Shigella flexneri K-272]
gi|333015464|gb|EGK34803.1| alanyl-tRNA synthetase [Shigella flexneri K-227]
Length = 786
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 82/156 (52%), Gaps = 33/156 (21%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FS------------- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL---SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F++ + +K + + + L S ++VGD ++ ID ARR I NH+ATH+++
Sbjct: 427 ----FAVEDTQKYGQAIGHIGKLAAGSLKVKVGDAVQADIDEARRARIRLNHSATHLMHA 482
Query: 443 ALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
ALR VLG QKGSLV L H M+ EE
Sbjct: 483 ALRQVLGTHVSQKGSLVNDKMLRFDFSHNEAMKPEE 518
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|168787948|ref|ZP_02812955.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
gi|261225988|ref|ZP_05940269.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
gi|261256754|ref|ZP_05949287.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
gi|189372228|gb|EDU90644.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC869]
Length = 876
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 29/153 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS +V + KY
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FSFVVE-DTQKYGQA 530
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I L+ + +L+VGD ++ +D ARR I NH+ATH+++ ALR
Sbjct: 531 IGHIGKLA---------------AGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALR 575
Query: 446 FVLGPEADQKGSL----VYRYHL-HENIMECEE 473
VLG QKGSL V R+ H M+ EE
Sbjct: 576 QVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|422835922|ref|ZP_16883973.1| alanyl-tRNA synthetase [Escherichia coli E101]
gi|371611289|gb|EHN99813.1| alanyl-tRNA synthetase [Escherichia coli E101]
Length = 876
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 29/153 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS +V + KY
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FSFVVE-DTQKYGQA 530
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I L+ + +L+VGD ++ +D ARR I NH+ATH+++ ALR
Sbjct: 531 IGHIGKLA---------------AGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALR 575
Query: 446 FVLGPEADQKGSL----VYRYHL-HENIMECEE 473
VLG QKGSL V R+ H M+ EE
Sbjct: 576 QVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|160863476|gb|ABX20099.1| hypothetical protein SARI_00146 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:-]
Length = 784
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 26/139 (18%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N + V+++++G EA ++LD++ FYAE GGQ+ D+G + GV
Sbjct: 384 NGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGVG------------------- 424
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
F++++ +K + + L LS L+VGD ++ +D ARR I NH+ATH++
Sbjct: 425 ------FTFAVNDTQKYGQAIGHLGKLSAGALKVGDVVQADVDEARRARIRLNHSATHLM 478
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR VLG QKGSLV
Sbjct: 479 HAALRQVLGAHVAQKGSLV 497
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERDIKVDEAGFETAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V ++ + EAI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVNGKAVEAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 31/40 (77%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
N + V+++++G EA ++LD++ FYAE GGQ+ D+G + GV
Sbjct: 384 NGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGV 423
>gi|15803211|ref|NP_289243.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
gi|12517136|gb|AAG57801.1|AE005498_2 alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
Length = 878
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 29/153 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS +V + KY
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FSFVVE-DTQKYGQA 530
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I L+ + +L+VGD ++ +D ARR I NH+ATH+++ ALR
Sbjct: 531 IGHIGKLA---------------AGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALR 575
Query: 446 FVLGPEADQKGSL----VYRYHL-HENIMECEE 473
VLG QKGSL V R+ H M+ EE
Sbjct: 576 QVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|15832808|ref|NP_311581.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
gi|168749982|ref|ZP_02775004.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
gi|168755438|ref|ZP_02780445.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
gi|168762908|ref|ZP_02787915.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
gi|168768784|ref|ZP_02793791.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
gi|168774775|ref|ZP_02799782.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
gi|168778675|ref|ZP_02803682.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
gi|168800226|ref|ZP_02825233.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
gi|194433071|ref|ZP_03065354.1| alanyl-tRNA synthetase [Shigella dysenteriae 1012]
gi|195938445|ref|ZP_03083827.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
gi|208805868|ref|ZP_03248205.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
gi|208813761|ref|ZP_03255090.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
gi|208818286|ref|ZP_03258606.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
gi|209398791|ref|YP_002272160.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
gi|217327497|ref|ZP_03443580.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
gi|254794638|ref|YP_003079475.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
gi|291284024|ref|YP_003500842.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
gi|387508049|ref|YP_006160305.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
gi|387883880|ref|YP_006314182.1| alanyl-tRNA synthetase [Escherichia coli Xuzhou21]
gi|416776800|ref|ZP_11874834.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
gi|416788228|ref|ZP_11879760.1| alanyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
gi|416800193|ref|ZP_11884672.1| alanyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
gi|416810758|ref|ZP_11889436.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97]
gi|416821473|ref|ZP_11894087.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
gi|416831835|ref|ZP_11899182.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
gi|419087709|ref|ZP_13633062.1| alanyl-tRNA synthetase [Escherichia coli DEC4B]
gi|419105221|ref|ZP_13650348.1| alanyl-tRNA synthetase [Escherichia coli DEC4E]
gi|419127318|ref|ZP_13672196.1| alanyl-tRNA synthetase [Escherichia coli DEC5C]
gi|425139672|ref|ZP_18540054.1| alanine--tRNA ligase [Escherichia coli 10.0833]
gi|425238064|ref|ZP_18631784.1| alanine--tRNA ligase [Escherichia coli TT12B]
gi|425295965|ref|ZP_18686161.1| alanine--tRNA ligase [Escherichia coli PA38]
gi|425361679|ref|ZP_18747327.1| alanine--tRNA ligase [Escherichia coli EC1856]
gi|428985045|ref|ZP_19054441.1| alanine--tRNA ligase [Escherichia coli 93.0055]
gi|429074485|ref|ZP_19137738.1| alanine--tRNA ligase [Escherichia coli 99.0678]
gi|445008407|ref|ZP_21324646.1| alanine--tRNA ligase [Escherichia coli PA47]
gi|445013510|ref|ZP_21329617.1| alanine--tRNA ligase [Escherichia coli PA48]
gi|445046493|ref|ZP_21361743.1| alanine--tRNA ligase [Escherichia coli 3.4880]
gi|445057768|ref|ZP_21372626.1| alanine--tRNA ligase [Escherichia coli 99.0670]
gi|452969481|ref|ZP_21967708.1| alanyl-tRNA ligase [Escherichia coli O157:H7 str. EC4009]
gi|20532246|sp|Q8X3W8.2|SYA_ECO57 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|13363025|dbj|BAB36977.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
gi|187769613|gb|EDU33457.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
gi|188015823|gb|EDU53945.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
gi|189003197|gb|EDU72183.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
gi|189357241|gb|EDU75660.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
gi|189362083|gb|EDU80502.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
gi|189366853|gb|EDU85269.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4501]
gi|189377449|gb|EDU95865.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC508]
gi|194418798|gb|EDX34884.1| alanyl-tRNA synthetase [Shigella dysenteriae 1012]
gi|208725669|gb|EDZ75270.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
gi|208735038|gb|EDZ83725.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
gi|208738409|gb|EDZ86091.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
gi|209160191|gb|ACI37624.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
gi|217319864|gb|EEC28289.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
gi|254594038|gb|ACT73399.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
gi|290763897|gb|ADD57858.1| Alanyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
gi|320640339|gb|EFX09878.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
gi|320645886|gb|EFX14867.1| alanyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
gi|320651186|gb|EFX19621.1| alanyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
gi|320656736|gb|EFX24624.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320662279|gb|EFX29676.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
gi|320667330|gb|EFX34288.1| alanyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
gi|374360043|gb|AEZ41750.1| alanyl-tRNA synthetase [Escherichia coli O55:H7 str. RM12579]
gi|377928983|gb|EHU92883.1| alanyl-tRNA synthetase [Escherichia coli DEC4B]
gi|377946401|gb|EHV10081.1| alanyl-tRNA synthetase [Escherichia coli DEC4E]
gi|377973037|gb|EHV36381.1| alanyl-tRNA synthetase [Escherichia coli DEC5C]
gi|386797338|gb|AFJ30372.1| alanyl-tRNA synthetase [Escherichia coli Xuzhou21]
gi|408153813|gb|EKH82183.1| alanine--tRNA ligase [Escherichia coli TT12B]
gi|408216375|gb|EKI40703.1| alanine--tRNA ligase [Escherichia coli PA38]
gi|408276030|gb|EKI95963.1| alanine--tRNA ligase [Escherichia coli EC1856]
gi|408577740|gb|EKK53290.1| alanine--tRNA ligase [Escherichia coli 10.0833]
gi|427240883|gb|EKW08329.1| alanine--tRNA ligase [Escherichia coli 93.0055]
gi|427326959|gb|EKW88360.1| alanine--tRNA ligase [Escherichia coli 99.0678]
gi|444622150|gb|ELV96114.1| alanine--tRNA ligase [Escherichia coli PA47]
gi|444623119|gb|ELV97054.1| alanine--tRNA ligase [Escherichia coli PA48]
gi|444658799|gb|ELW31236.1| alanine--tRNA ligase [Escherichia coli 3.4880]
gi|444668923|gb|ELW40921.1| alanine--tRNA ligase [Escherichia coli 99.0670]
Length = 876
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 29/153 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS +V + KY
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FSFVVE-DTQKYGQA 530
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I L+ + +L+VGD ++ +D ARR I NH+ATH+++ ALR
Sbjct: 531 IGHIGKLA---------------AGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALR 575
Query: 446 FVLGPEADQKGSL----VYRYHL-HENIMECEE 473
VLG QKGSL V R+ H M+ EE
Sbjct: 576 QVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|421846627|ref|ZP_16279773.1| alanyl-tRNA ligase [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|411771957|gb|EKS55604.1| alanyl-tRNA ligase [Citrobacter freundii ATCC 8090 = MTCC 1658]
gi|455643428|gb|EMF22556.1| alanyl-tRNA ligase [Citrobacter freundii GTC 09479]
Length = 875
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G +A ++LD++ FYAE GGQ+ D+G L+G+ +A
Sbjct: 480 VDAINAGQDAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFA-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + LS +L++GD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVSDTQKYGQAIGHIGKLSAGSLKIGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG 65
+G
Sbjct: 439 ASG 441
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VD++++G +A ++LD++ FYAE GGQ+ D+G + F +VS +
Sbjct: 468 GKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQVGDKGELKGAGFAFAVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VD++++G +A ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDAINAGQDAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|295672445|ref|XP_002796769.1| alanyl-tRNA synthetase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283749|gb|EEH39315.1| alanyl-tRNA synthetase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 962
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 76/141 (53%), Gaps = 26/141 (18%)
Query: 322 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
NK+FV+S + G + GI+LD++NFYAEQGGQ YD G +I ++ ++++ + V +
Sbjct: 513 NKKFVNSSKDIPEGEQFGIILDRTNFYAEQGGQEYDTGKII-IDGKAELTV---EDVQVY 568
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G F+++ + V D + D RR PI +NHT TH
Sbjct: 569 GGYVLHTGFMKYG-------------------SFNVNDSVIAEYDELRRWPIRNNHTGTH 609
Query: 439 ILNHALRFVLGPEADQKGSLV 459
ILN ALR VLG +QKGSLV
Sbjct: 610 ILNFALRKVLGDGVEQKGSLV 630
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 48/90 (53%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFC 73
L G WRLYDT+GFPVDLTQLM EE+GL +D +E+A+ +A+ + Q + V
Sbjct: 416 LHGADVWRLYDTFGFPVDLTQLMAEERGLKIDNGEFEEARLRAKEASKGQGKLTKDVVKL 475
Query: 74 GGTHLAMAHHVGDFCISSEEAIAKGSNIVS 103
L + + D + + A NI S
Sbjct: 476 TVHDLGLLETMDDVPKTDDSAKFGRGNITS 505
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 32/42 (76%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+NK+FV+S + G + GI+LD++NFYAEQGGQ YD G +I
Sbjct: 512 HNKKFVNSSKDIPEGEQFGIILDRTNFYAEQGGQEYDTGKII 553
>gi|293415946|ref|ZP_06658586.1| alanyl-tRNA synthetase [Escherichia coli B185]
gi|331684309|ref|ZP_08384901.1| alanine--tRNA ligase [Escherichia coli H299]
gi|422817812|ref|ZP_16866025.1| alanyl-tRNA synthetase [Escherichia coli M919]
gi|432450826|ref|ZP_19693086.1| alanyl-tRNA synthetase [Escherichia coli KTE193]
gi|432948665|ref|ZP_20143670.1| alanyl-tRNA synthetase [Escherichia coli KTE196]
gi|433034510|ref|ZP_20222215.1| alanyl-tRNA synthetase [Escherichia coli KTE112]
gi|433044222|ref|ZP_20231712.1| alanyl-tRNA synthetase [Escherichia coli KTE117]
gi|450191795|ref|ZP_21891343.1| alanyl-tRNA ligase [Escherichia coli SEPT362]
gi|291432135|gb|EFF05117.1| alanyl-tRNA synthetase [Escherichia coli B185]
gi|331077924|gb|EGI49130.1| alanine--tRNA ligase [Escherichia coli H299]
gi|385538325|gb|EIF85187.1| alanyl-tRNA synthetase [Escherichia coli M919]
gi|430978760|gb|ELC95561.1| alanyl-tRNA synthetase [Escherichia coli KTE193]
gi|431455944|gb|ELH36295.1| alanyl-tRNA synthetase [Escherichia coli KTE196]
gi|431549148|gb|ELI23236.1| alanyl-tRNA synthetase [Escherichia coli KTE112]
gi|431554917|gb|ELI28782.1| alanyl-tRNA synthetase [Escherichia coli KTE117]
gi|449319042|gb|EMD09098.1| alanyl-tRNA ligase [Escherichia coli SEPT362]
Length = 876
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 82/153 (53%), Gaps = 29/153 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N FS +V + KY
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN--------FSFVVE-DTQKYGQA 530
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I L+ + +L+VGD ++ +D ARR I NH+ATH+++ ALR
Sbjct: 531 IGHIGKLA---------------AGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALR 575
Query: 446 FVLGPEADQKGSL----VYRYHL-HENIMECEE 473
VLG QKGSL V R+ H M+ EE
Sbjct: 576 QVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|395229809|ref|ZP_10408119.1| alanyl-tRNA synthetase [Citrobacter sp. A1]
gi|424730024|ref|ZP_18158622.1| alanyl-trna synthetase [Citrobacter sp. L17]
gi|394716484|gb|EJF22222.1| alanyl-tRNA synthetase [Citrobacter sp. A1]
gi|422895236|gb|EKU35025.1| alanyl-trna synthetase [Citrobacter sp. L17]
Length = 875
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G +A ++LD++ FYAE GGQ+ D+G L+G+ +A
Sbjct: 480 VDAINAGQDAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFA-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + LS +L++GD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVSDTQKYGQAIGHIGKLSAGSLKIGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++ + EF G HL + V + + +AI G + V
Sbjct: 439 ASGFGADYNAMIRVDGASEFKGYEHLELNGKVTALFVDGKAVDAINAGQDAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VD++++G +A ++LD++ FYAE GGQ+ D+G + F +VS +
Sbjct: 468 GKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQVGDKGELKGAGFAFAVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VD++++G +A ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDAINAGQDAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|237729651|ref|ZP_04560132.1| alanyl-tRNA synthetase [Citrobacter sp. 30_2]
gi|226908257|gb|EEH94175.1| alanyl-tRNA synthetase [Citrobacter sp. 30_2]
Length = 875
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G +A ++LD++ FYAE GGQ+ D+G L+G+ +A
Sbjct: 480 VDAINAGQDAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFA-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + LS +L++GD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVSDTQKYGQAIGHIGKLSAGSLKIGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++ + EF G HL + V + + +AI G + V
Sbjct: 439 ASGFGADYNAMIRVDGASEFKGYEHLELNGKVTALFVDGKAVDAINAGQDAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VD++++G +A ++LD++ FYAE GGQ+ D+G + F +VS +
Sbjct: 468 GKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQVGDKGELKGAGFAFAVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VD++++G +A ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDAINAGQDAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|365101551|ref|ZP_09332181.1| alanyl-tRNA synthetase [Citrobacter freundii 4_7_47CFAA]
gi|363647101|gb|EHL86330.1| alanyl-tRNA synthetase [Citrobacter freundii 4_7_47CFAA]
Length = 875
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G +A ++LD++ FYAE GGQ+ D+G L+G+ +A
Sbjct: 480 VDAINAGQDAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFA-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + LS +L++GD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVSDTQKYGQAIGHIGKLSAGSLKIGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++ + EF G HL + V + + +AI G + V
Sbjct: 439 ASGFGADYNAMIRVDGASEFKGYEHLELNGKVTALFVDGKAVDAINAGQDAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VD++++G +A ++LD++ FYAE GGQ+ D+G + F +VS +
Sbjct: 468 GKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQVGDKGELKGAGFAFAVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VD++++G +A ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDAINAGQDAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|428316168|ref|YP_007114050.1| alanyl-tRNA synthetase [Oscillatoria nigro-viridis PCC 7112]
gi|428239848|gb|AFZ05634.1| alanyl-tRNA synthetase [Oscillatoria nigro-viridis PCC 7112]
Length = 886
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/259 (29%), Positives = 113/259 (43%), Gaps = 46/259 (17%)
Query: 224 FVKRLRFSYNKQFVDSVSSGTEAGILLDKSNF--------YAEQGGQIYDEGFMIGVNDE 275
V R + N+Q SG +A L D F EQG + +GF + ++
Sbjct: 374 IVDRTKQQANQQI-----SGQDAFTLYDTYGFPLELTQEIAEEQGITVDLDGFEAAMKEQ 428
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDK-------SNF--YAEQGGQIYDEGFMSNKQFV 326
T + +Q +D G+ LDK + F YAE E + + + V
Sbjct: 429 QTRA--KDARQTIDLTVQGS-----LDKLAETIQGTEFVGYAELSSLAEVEVILVDGKSV 481
Query: 327 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPI 386
+ ++GTE ++L+++ FYAE GGQI D+G++ N Q E LV ++ K
Sbjct: 482 EEAAAGTEVQVVLNQTPFYAESGGQIGDKGYL---NGSIQGENGEGLLVRVDDVKKESDF 538
Query: 387 FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRF 446
F+ F TLRVGD + ID + RR I +NHTATH+L ALR
Sbjct: 539 FVHFGFVE--------------RGTLRVGDSITAKIDNSGRRRIQANHTATHLLQSALRK 584
Query: 447 VLGPEADQKGSLVYRYHLH 465
++ Q GSLV L
Sbjct: 585 IVDDSISQAGSLVTSERLR 603
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 35/45 (77%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQS 58
+ G A+ LYDTYGFP++LTQ + EE+G++VD++ +E A K+ Q+
Sbjct: 386 ISGQDAFTLYDTYGFPLELTQEIAEEQGITVDLDGFEAAMKEQQT 430
>gi|383935935|ref|ZP_09989367.1| alanyl-tRNA synthetase [Rheinheimera nanhaiensis E407-8]
gi|383703017|dbj|GAB59458.1| alanyl-tRNA synthetase [Rheinheimera nanhaiensis E407-8]
Length = 874
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 72/141 (51%), Gaps = 24/141 (17%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ Q V ++ G EA ++LDK+ FYAE GGQ+ D G SL
Sbjct: 471 ILQQGQAVTTLDDGAEALLILDKTPFYAESGGQVGDTG----------------SLTLAS 514
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G+ + + ++ + K + L TL++GDK+ ID+ARR I NH+ATH
Sbjct: 515 GAVFVVEDTIKLGKAFAHKGR--------LQGTLKLGDKVDAQIDSARRAAIKQNHSATH 566
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ ALR VLG QKGSLV
Sbjct: 567 LLHAALRKVLGEHVTQKGSLV 587
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 10/75 (13%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA----KKKAQ------SEPES 62
VLPG++ ++LYDTYGFPVDLT + E+ LS+D ++ A +K+AQ ++ +
Sbjct: 387 VLPGELVFKLYDTYGFPVDLTNDVARERNLSIDQAGFDAAMAEQRKRAQQASNFGTDYNA 446
Query: 63 QAGMETSVEFCGGTH 77
Q EF G H
Sbjct: 447 QLSSSQHTEFTGYQH 461
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
TVV + Q V ++ G EA ++LDK+ FYAE GGQ+ D G ++
Sbjct: 466 ATVVEILQQGQAVTTLDDGAEALLILDKTPFYAESGGQVGDTGSLT 511
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 67/177 (37%), Gaps = 37/177 (20%)
Query: 121 EMVNKYPSLYRLFRTVHKQKYVQDALNVSCLSFRGVWEHGMSVGWTGVAI---GALPFGL 177
+M YP L KQ V+ L + F E G+++ +A+ LP L
Sbjct: 339 QMGEAYPEL------AAKQAVVEKILKLEEEQFGKTLERGLTILEEALAVLDGTVLPGEL 392
Query: 178 TVPL--TFGPSLGLVFLAVAEFLFLVSSCGF----------------IGSDTGLGDLSQT 219
L T+G + L E + GF G+D LS +
Sbjct: 393 VFKLYDTYGFPVDLTNDVARERNLSIDQAGFDAAMAEQRKRAQQASNFGTDYN-AQLSSS 451
Query: 220 KHTPFV---------KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 267
+HT F + Q V ++ G EA ++LDK+ FYAE GGQ+ D G
Sbjct: 452 QHTEFTGYQHEFGNATVVEILQQGQAVTTLDDGAEALLILDKTPFYAESGGQVGDTG 508
>gi|429143630|gb|AFZ77083.1| alanyl-tRNA synthetase [Gilliamella apicola]
Length = 877
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 81/168 (48%), Gaps = 26/168 (15%)
Query: 300 LLDKSNFYAEQGGQIYDE--GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGF 357
L DK+ F Q + + N Q V+ +++G +A ++LDK+ FY E GGQI D+G
Sbjct: 451 LDDKTEFLGYQDTESLGKVIAIFKNGQKVECINAGDDAIVILDKTPFYGESGGQIGDKGL 510
Query: 358 MIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDK 417
+ N L FS L + KY K + L H + +L+VGD
Sbjct: 511 LTSAN------LEFSVL---DSQKYG---------------KSIGHLGHVIKGSLKVGDN 546
Query: 418 LKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
+ ID R I NH+ATH+L AL+ +LG QKGSLV +L
Sbjct: 547 VTAAIDIELRERIRRNHSATHLLQAALQRILGNHVHQKGSLVNENYLR 594
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%), Gaps = 4/49 (8%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD----MEVYEDAKKKAQ 57
+LPGDVA++LYDTYGFP+DLT + EK +++D + E+ +K+A+
Sbjct: 388 ILPGDVAFKLYDTYGFPLDLTADVCREKNITIDESGFNQCMEEQRKRAR 436
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 26/205 (12%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS--NKQF--VDSVSS 331
G V+ + N Q V+ +++G +A ++LDK+ FY E GGQI D+G ++ N +F +DS
Sbjct: 467 GKVIAIFKNGQKVECINAGDDAIVILDKTPFYGESGGQIGDKGLLTSANLEFSVLDSQKY 526
Query: 332 GTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS-KYALPIFLQF 390
G G L G + +G N + I++ + S + L LQ
Sbjct: 527 GKSIGHL-----------GHVIKGSLKVGDNVTAAIDIELRERIRRNHSATHLLQAALQR 575
Query: 391 SLSN-LKKKKKLVK---LLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRF 446
L N + +K LV L SH + + I+ + N H L + F
Sbjct: 576 ILGNHVHQKGSLVNENYLRFDFSHNQAITPEQINEIEN------LVNQQIRHNLQVDIEF 629
Query: 447 VLGPEADQKGSLVYRYHLHENIMEC 471
+ +A KG++ +ENI+
Sbjct: 630 MPIDDAKNKGAMALFGEKYENIVRV 654
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
N Q V+ +++G +A ++LDK+ FY E GGQI D+G + N E +V+
Sbjct: 475 NGQKVECINAGDDAIVILDKTPFYGESGGQIGDKGLLTSANLEFSVL 521
>gi|283835574|ref|ZP_06355315.1| alanine--tRNA ligase [Citrobacter youngae ATCC 29220]
gi|291068784|gb|EFE06893.1| alanine--tRNA ligase [Citrobacter youngae ATCC 29220]
Length = 875
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G +A ++LD++ FYAE GGQ+ D+G L+G+ +A
Sbjct: 480 VDAINAGQDAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFA-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + LS +L++GD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVSDTQKYGQAIGHIGKLSAGSLKIGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD E +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEEGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++ + EF G HL + V + + +AI G + V
Sbjct: 439 ASGFGADYNAMIRVDGASEFKGYEHLELNGKVTALFVDGKAVDAINAGQDAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VD++++G +A ++LD++ FYAE GGQ+ D+G + F +VS +
Sbjct: 468 GKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQVGDKGELKGAGFAFAVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VD++++G +A ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDAINAGQDAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|297737255|emb|CBI26456.3| unnamed protein product [Vitis vinifera]
Length = 267
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 76/141 (53%), Gaps = 32/141 (22%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+F++S ++G E GI+L+ ++FY E+GGQI+D G +LEGS +
Sbjct: 41 EFLESAAAGDEVGIILETTSFYTEKGGQIFDTG-------------------SLEGSCGS 81
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHT-----LRVGDKLKLHIDTARRRPIMSNHTATH 438
F +SN++ V LH S T VGDK+ +D RR+ I NHT TH
Sbjct: 82 ------FQVSNVQIYGGFV--LHIGSVTGEIGRFSVGDKVICKVDYDRRKLIAPNHTYTH 133
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+LN A+R VLG DQKGS+V
Sbjct: 134 MLNFAMREVLGNHVDQKGSIV 154
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 273 NDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+ E + + +F++S ++G E GI+L+ ++FY E+GGQI+D G
Sbjct: 28 DHESVIKAIYTGTEFLESAAAGDEVGIILETTSFYTEKGGQIFDTG 73
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
+F++S ++G E GI+L+ ++FY E+GGQI+D G + G
Sbjct: 41 EFLESAAAGDEVGIILETTSFYTEKGGQIFDTGSLEG 77
>gi|366161551|ref|ZP_09461413.1| alanyl-tRNA synthetase [Escherichia sp. TW09308]
Length = 704
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 85/154 (55%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G L+G+ ++
Sbjct: 308 VDAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGASFS-- 346
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 347 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 402
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 403 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 436
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 208 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 266
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 267 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 326
Query: 111 FQSHSGSINDEMVNKYPSLYRLFRTVHKQKYVQ 143
+ G + D+ K S F QKY Q
Sbjct: 327 YAESGGQVGDKGELKGASFS--FAVEDTQKYGQ 357
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 296 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGASF 345
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G +
Sbjct: 308 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAS 344
>gi|346973803|gb|EGY17255.1| alanyl-tRNA synthetase [Verticillium dahliae VdLs.17]
Length = 958
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 80/150 (53%), Gaps = 33/150 (22%)
Query: 314 IYD-EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFS 372
I+D +GF+ + + ++ T ++LDK+NFYAE GGQ+ D G + V DES
Sbjct: 507 IFDGKGFVKSTK---DIAENTPISVILDKTNFYAEAGGQVADTGRL--VIDES------- 554
Query: 373 SLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLH---TLSHTLRVGDKLKLHIDTARRRP 429
++F + +++ + LH S TL GD++ D RR P
Sbjct: 555 ---------------VEFKVLDVQSYGGYI--LHHGYIESGTLSSGDEVICEYDELRRSP 597
Query: 430 IMSNHTATHILNHALRFVLGPEADQKGSLV 459
I +NHT THILNHALR VLG + +QKGSLV
Sbjct: 598 IRNNHTGTHILNHALREVLGEDVNQKGSLV 627
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 48/77 (62%), Gaps = 3/77 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES-QAGMET-- 68
K L G W+LYDTYGFPVDLTQLM EE+GL +D E + A++KA+ +S ++ +ET
Sbjct: 411 KKLSGAEVWKLYDTYGFPVDLTQLMAEERGLQIDDEEVKVAQEKAREASKSVKSAIETFP 470
Query: 69 SVEFCGGTHLAMAHHVG 85
++ G L H +
Sbjct: 471 KLDVHGIAELEQQHQIA 487
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 1/48 (2%)
Query: 60 PESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
P+ SVEFCGGTH+ H+ D I E IAKG I+++ G
Sbjct: 708 PKKPEWRNISVEFCGGTHVEQTGHIKDLVIVEESGIAKGIRRIIAFTG 755
Score = 38.5 bits (88), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 234 KQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
K FV S ++ T ++LDK+NFYAE GGQ+ D G ++
Sbjct: 511 KGFVKSTKDIAENTPISVILDKTNFYAEAGGQVADTGRLV 550
>gi|448236180|ref|YP_001569241.2| alanyl-tRNA ligase [Salmonella enterica subsp. arizonae serovar
62:z4,z23:- str. RSK2980]
gi|205830248|sp|A9MFZ1.2|SYA_SALAR RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 876
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 77/139 (55%), Gaps = 26/139 (18%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N + V+++++G EA ++LD++ FYAE GGQ+ D+G + GV
Sbjct: 476 NGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGVG------------------- 516
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
F++++ +K + + L LS L+VGD ++ +D ARR I NH+ATH++
Sbjct: 517 ------FTFAVNDTQKYGQAIGHLGKLSAGALKVGDVVQADVDEARRARIRLNHSATHLM 570
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR VLG QKGSLV
Sbjct: 571 HAALRQVLGAHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERDIKVDEAGFETAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V ++ + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVNGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 31/40 (77%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
N + V+++++G EA ++LD++ FYAE GGQ+ D+G + GV
Sbjct: 476 NGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGV 515
>gi|385787400|ref|YP_005818509.1| alanyl-tRNA synthetase [Erwinia sp. Ejp617]
gi|310766672|gb|ADP11622.1| Alanyl-tRNA synthetase [Erwinia sp. Ejp617]
Length = 876
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 72/142 (50%), Gaps = 24/142 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q D++S+G E I+LD + FYAE GGQ+ D G + G + +S + KYA
Sbjct: 478 QAADTISAGREGVIVLDATPFYAESGGQVGDTGELQGNS---------ASFIVSNTQKYA 528
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
I L+ + LRVGD++ +D ARR I NH+ATH+L+ A
Sbjct: 529 QAIGHSGKLA---------------TGELRVGDRVAAQVDEARRARIRLNHSATHLLHAA 573
Query: 444 LRFVLGPEADQKGSLVYRYHLH 465
LR VLG QKGSLV +L
Sbjct: 574 LRQVLGQHVSQKGSLVNDKYLR 595
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+S L G+ +RLYDT+GFP DLT + E+ L +D +E A ++ + +G
Sbjct: 386 QSDTLDGETVFRLYDTFGFPADLTADVCRERNLKIDEAGFERAMEQQRQRARDASG 441
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
Q D++S+G E I+LD + FYAE GGQ+ D G + G
Sbjct: 478 QAADTISAGREGVIVLDATPFYAESGGQVGDTGELQG 514
>gi|440286460|ref|YP_007339225.1| alanyl-tRNA synthetase [Enterobacteriaceae bacterium strain FGI 57]
gi|440045982|gb|AGB77040.1| alanyl-tRNA synthetase [Enterobacteriaceae bacterium strain FGI 57]
Length = 875
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+SV++G EA ++LD++ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VESVAAGQEAVVILDQTPFYAESGGQVGDKG-------------------ELKGAGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
FS+++ +K + + L L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FSVNDTQKYGQAIGHLGKLTAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R +LG QKGSLV
Sbjct: 575 RQILGTHVAQKGSLV 589
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+GL VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERGLKVDEAGFEAAMEEQRRRARESSGFGADYNA 448
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++ + EF G HL + V I + E++A G V + G + D
Sbjct: 449 MIRVDGASEFKGYDHLELNGKVTALFIDGKAVESVAAGQEAVVILDQTPFYAESGGQVGD 508
Query: 121 E 121
+
Sbjct: 509 K 509
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 30/44 (68%), Gaps = 6/44 (13%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDE------GFMIGVND 274
V+SV++G EA ++LD++ FYAE GGQ+ D+ GF VND
Sbjct: 480 VESVAAGQEAVVILDQTPFYAESGGQVGDKGELKGAGFSFSVND 523
>gi|401764933|ref|YP_006579940.1| alanyl-tRNA ligase [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400176467|gb|AFP71316.1| alanyl-tRNA ligase [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 875
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDS+S+G +A ++LDK+ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDSISAGQDAVVILDKTPFYAESGGQVGDKG-------------------ELKGNGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
FS+S+ +K + + L S +L+VG+ ++ ++D ARR I NH+ATH+++ AL
Sbjct: 519 ----FSVSDTQKFGQAIGHQGKLVSGSLKVGEGVQANVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RDVLGTHVAQKGSLV 589
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-KGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEVGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G L + V + + ++I+ G + V
Sbjct: 439 SSGFGADYNAMIRVDSASEFKGYDALELTGKVTALFVDGKAVDSISAGQDAVVILDKTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVS 330
G V L + + VDS+S+G +A ++LDK+ FYAE GGQ+ D+G + F SVS
Sbjct: 468 GKVTALFVDGKAVDSISAGQDAVVILDKTPFYAESGGQVGDKGELKGNGFSFSVS 522
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VDS+S+G +A ++LDK+ FYAE GGQ+ D+G + G
Sbjct: 480 VDSISAGQDAVVILDKTPFYAESGGQVGDKGELKG 514
>gi|307945634|ref|ZP_07660970.1| alanyl-tRNA synthetase [Roseibium sp. TrichSKD4]
gi|307771507|gb|EFO30732.1| alanyl-tRNA synthetase [Roseibium sp. TrichSKD4]
Length = 888
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 79/151 (52%), Gaps = 27/151 (17%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+G +++ VD ++SG E ++L+++ FY E GGQ+ D G MIG
Sbjct: 469 KGLVADDAQVDKLNSGQEGFVVLNQTPFYGESGGQVGDAGLMIG---------------- 512
Query: 377 LEGSKYALPIFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNH 434
EG ++ ++S+++KK V + TL + L+L +D ARR I SNH
Sbjct: 513 -EG--------VRVTVSDVQKKADGLFVHAVKVEDGTLTLDQPLELKVDHARRTAIRSNH 563
Query: 435 TATHILNHALRFVLGPEADQKGSLVYRYHLH 465
+ATH+++ ALR VLG QKGS+V L
Sbjct: 564 SATHLVHEALREVLGTHVAQKGSMVSPERLR 594
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 36/49 (73%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
L G+ A++LYDTYGFP+DLTQ + +G+SVD + ++ A ++ ++E +
Sbjct: 382 LDGETAFKLYDTYGFPLDLTQDALRTRGISVDTDGFDSAMERQKAEARA 430
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 25/35 (71%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VD ++SG E ++L+++ FY E GGQ+ D G MIG
Sbjct: 478 VDKLNSGQEGFVVLNQTPFYGESGGQVGDAGLMIG 512
>gi|413952520|gb|AFW85169.1| hypothetical protein ZEAMMB73_280974 [Zea mays]
Length = 1088
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 27/219 (12%)
Query: 253 SNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGIL--LDKSNF--YA 308
+ +EQG + EGF I + ++ +N V +S G E I+ + + F Y
Sbjct: 602 AEIASEQGVTVDIEGFDIEMENQRKQSQAAHN---VVRLSVGNETEIVKNIPDTEFLGYD 658
Query: 309 EQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI--GVNDESQ 366
+G + N V+ VS G+E ILLD++ FYAE GGQ+ D GF+ G D Q
Sbjct: 659 SLSASAVIKGLLVNGNPVNEVSQGSEVEILLDRTPFYAESGGQVGDNGFLYVNGGEDRRQ 718
Query: 367 IELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTAR 426
++++ + +Q SL N+ K ++K ++ VG ++ +D
Sbjct: 719 -----TTVIEIND--------VQKSLGNIFVHKGMIK-----QGSVEVGKEVDASVDAKL 760
Query: 427 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
R+ ++HTATH+L AL+ V+G E Q GSLV HL
Sbjct: 761 RQGAKAHHTATHLLQSALKSVVGSETSQAGSLVAFDHLR 799
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N V+ VS G+E ILLD++ FYAE GGQ+ D GF+
Sbjct: 672 NGNPVNEVSQGSEVEILLDRTPFYAESGGQVGDNGFL 708
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQS 58
G L G + LYDTYGFPV++T + E+G++VD+E + E+ +K++Q+
Sbjct: 577 GNKPSLSGKNVFLLYDTYGFPVEITAEIASEQGVTVDIEGFDIEMENQRKQSQA 630
>gi|212541448|ref|XP_002150879.1| alanyl-tRNA synthetase, putative [Talaromyces marneffei ATCC 18224]
gi|210068178|gb|EEA22270.1| alanyl-tRNA synthetase, putative [Talaromyces marneffei ATCC 18224]
Length = 1000
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 71/136 (52%), Gaps = 23/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q V G + G++LD++NFYAEQGGQ D G I +N ++++E+ V G
Sbjct: 556 QTTADVPEGEQIGVILDRTNFYAEQGGQENDTG-AIYINGKAELEV---GDVQSYGGYVL 611
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
F+++ +L VGD + D RR+PI +NHT THILN A
Sbjct: 612 HTGFIKYG-------------------SLAVGDSVTCEFDDRRRQPIRNNHTGTHILNFA 652
Query: 444 LRFVLGPEADQKGSLV 459
LR VLG +QKGSLV
Sbjct: 653 LREVLGDGINQKGSLV 668
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ--SEPESQAGMET 68
L G WRLYDT+GFPVDLTQ+M EE+GLS+D +E+A+ KA+ S+ + +A ET
Sbjct: 454 LHGADVWRLYDTFGFPVDLTQIMAEERGLSIDEAEFEEARLKAKEASKGQKKAAAET 510
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 275 EGTVVGLRYNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
E V + Y+K F+ + V G + G++LD++NFYAEQGGQ D G
Sbjct: 542 ESVVKAIYYSKSFIQTTADVPEGEQIGVILDRTNFYAEQGGQENDTG 588
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 27/39 (69%), Gaps = 3/39 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEG 267
Y+K F+ + V G + G++LD++NFYAEQGGQ D G
Sbjct: 550 YSKSFIQTTADVPEGEQIGVILDRTNFYAEQGGQENDTG 588
>gi|242798694|ref|XP_002483222.1| alanyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
10500]
gi|218716567|gb|EED15988.1| alanyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
10500]
Length = 1002
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 76/141 (53%), Gaps = 26/141 (18%)
Query: 322 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+K F+ S V G + G++LD++NFYAEQGGQ D G +I ++ ++++E+ V
Sbjct: 553 SKNFIQSTADVPEGEQIGVILDRTNFYAEQGGQENDTG-IISIDGKAELEV---GDVQSY 608
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G F+++ +L VGD + D RR+PI +NHT TH
Sbjct: 609 GGYVLHTGFIKYG-------------------SLAVGDSVMCEFDDRRRQPIRNNHTGTH 649
Query: 439 ILNHALRFVLGPEADQKGSLV 459
ILN ALR +LG +QKGSLV
Sbjct: 650 ILNFALREILGDGINQKGSLV 670
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/57 (54%), Positives = 42/57 (73%), Gaps = 2/57 (3%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ--SEPESQAGMET 68
L G WRLYDT+GFPVDLTQ+M EE+GLS+D +E+A+ KA+ S+ + +A ET
Sbjct: 456 LHGADVWRLYDTFGFPVDLTQIMAEERGLSIDEAEFEEARLKAKEASKGQKKAAAET 512
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 275 EGTVVGLRYNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
E V + Y+K F+ S V G + G++LD++NFYAEQGGQ D G +S
Sbjct: 544 ESIVKAIYYSKNFIQSTADVPEGEQIGVILDRTNFYAEQGGQENDTGIIS 593
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
Y+K F+ S V G + G++LD++NFYAEQGGQ D G +
Sbjct: 552 YSKNFIQSTADVPEGEQIGVILDRTNFYAEQGGQENDTGII 592
>gi|413952519|gb|AFW85168.1| hypothetical protein ZEAMMB73_280974 [Zea mays]
Length = 1115
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 106/219 (48%), Gaps = 27/219 (12%)
Query: 253 SNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGIL--LDKSNF--YA 308
+ +EQG + EGF I + ++ +N V +S G E I+ + + F Y
Sbjct: 629 AEIASEQGVTVDIEGFDIEMENQRKQSQAAHN---VVRLSVGNETEIVKNIPDTEFLGYD 685
Query: 309 EQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI--GVNDESQ 366
+G + N V+ VS G+E ILLD++ FYAE GGQ+ D GF+ G D Q
Sbjct: 686 SLSASAVIKGLLVNGNPVNEVSQGSEVEILLDRTPFYAESGGQVGDNGFLYVNGGEDRRQ 745
Query: 367 IELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTAR 426
++++ + +Q SL N+ K ++K ++ VG ++ +D
Sbjct: 746 -----TTVIEIND--------VQKSLGNIFVHKGMIK-----QGSVEVGKEVDASVDAKL 787
Query: 427 RRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
R+ ++HTATH+L AL+ V+G E Q GSLV HL
Sbjct: 788 RQGAKAHHTATHLLQSALKSVVGSETSQAGSLVAFDHLR 826
Score = 45.1 bits (105), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N V+ VS G+E ILLD++ FYAE GGQ+ D GF+
Sbjct: 699 NGNPVNEVSQGSEVEILLDRTPFYAESGGQVGDNGFL 735
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 4/54 (7%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQS 58
G L G + LYDTYGFPV++T + E+G++VD+E + E+ +K++Q+
Sbjct: 604 GNKPSLSGKNVFLLYDTYGFPVEITAEIASEQGVTVDIEGFDIEMENQRKQSQA 657
>gi|53729167|ref|ZP_00134001.2| COG0013: Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208134|ref|YP_001053359.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
gi|205829968|sp|A3N018.1|SYA_ACTP2 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|126096926|gb|ABN73754.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 5b
str. L20]
Length = 874
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 31/153 (20%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G SN + VD++ SG A I+LD+++FYAE GGQ+ D G L++
Sbjct: 471 GLFSNGKAVDTIQSGESAVIILDQTSFYAEMGGQVGDSG-----------------LIST 513
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTA 436
E F++++ +K ++ + L S +L +GDK+ + RR I +NH+A
Sbjct: 514 E--------ICNFAVNDTQKYGQVFGHIGQLTSGSLSIGDKVTATVHATRRIAITANHSA 565
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLHENIM 469
TH+L+ ALR VLG QKGSLV ENI+
Sbjct: 566 THLLHSALREVLGDHVAQKGSLV-----SENIL 593
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 35/49 (71%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
+ T+VGL N + VD++ SG A I+LD+++FYAE GGQ+ D G +S +
Sbjct: 466 QATIVGLFSNGKAVDTIQSGESAVIILDQTSFYAEMGGQVGDSGLISTE 514
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
E+ L G+VA++LYDTYGFP+DLT + E+ L++D +E A+ AQ E
Sbjct: 385 ENNTLSGEVAFKLYDTYGFPLDLTADVCRERELTIDEAGFE-AEMTAQRE 433
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N + VD++ SG A I+LD+++FYAE GGQ+ D G +
Sbjct: 475 NGKAVDTIQSGESAVIILDQTSFYAEMGGQVGDSGLI 511
>gi|259909418|ref|YP_002649774.1| Alanyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
gi|387872400|ref|YP_005803782.1| protein alaS [Erwinia pyrifoliae DSM 12163]
gi|224965040|emb|CAX56571.1| Alanyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
gi|283479495|emb|CAY75411.1| alaS [Erwinia pyrifoliae DSM 12163]
Length = 876
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/142 (37%), Positives = 73/142 (51%), Gaps = 24/142 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q D++S+G E I+LD + FYAE GGQ+ D G + G + +SL+ KYA
Sbjct: 478 QAADTISAGREGVIVLDATPFYAESGGQVGDTGELQGNS---------ASLIVSNTQKYA 528
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
I L+ + LRVG+++ +D ARR I NH+ATH+L+ A
Sbjct: 529 QAIGHSGKLA---------------TGELRVGERVAAQVDEARRARIRLNHSATHLLHAA 573
Query: 444 LRFVLGPEADQKGSLVYRYHLH 465
LR VLG QKGSLV +L
Sbjct: 574 LRQVLGQHVSQKGSLVNDKYLR 595
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+S L G+ +RLYDT+GFP DLT + E+ L +D +E A ++ + +G
Sbjct: 386 QSDTLDGETVFRLYDTFGFPADLTADVCRERNLKIDEAGFERAMEQQRQRARDASG 441
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
Q D++S+G E I+LD + FYAE GGQ+ D G + G
Sbjct: 478 QAADTISAGREGVIVLDATPFYAESGGQVGDTGELQG 514
>gi|50310341|ref|XP_455190.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644326|emb|CAG97897.1| KLLA0F02431p [Kluyveromyces lactis]
Length = 956
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 84/148 (56%), Gaps = 29/148 (19%)
Query: 313 QIYDEGFMSNKQFVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWF 371
+IYD ++FVDS++ G + G++LDK+ FYAEQGGQ +D G ++ ++ E++
Sbjct: 506 RIYD-----GEKFVDSMTEIGKQYGVILDKTCFYAEQGGQEFDTGKLV-IDGEAEF---- 555
Query: 372 SSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIM 431
++ N++ Y +F SL + K L +GD + + RR P+
Sbjct: 556 -NVDNVQA--YNGYVFHTGSLGDGK---------------LSIGDSIIASYEELRRHPLR 597
Query: 432 SNHTATHILNHALRFVLGPEADQKGSLV 459
+NHT THILN AL+ VLG + DQKGSLV
Sbjct: 598 NNHTGTHILNFALKEVLGNDVDQKGSLV 625
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
K L G WRLYDTYGFPVDLT+LM EE+GL +D +E AK+++
Sbjct: 411 KTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDTIGFEKAKQES 455
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 273 NDEGTVVGLRYNKQFVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEG 318
N E T++ + ++FVDS++ G + G++LDK+ FYAEQGGQ +D G
Sbjct: 499 NVEATILRIYDGEKFVDSMTEIGKQYGVILDKTCFYAEQGGQEFDTG 545
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 32/44 (72%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEGFMI 270
LR ++FVDS++ G + G++LDK+ FYAEQGGQ +D G ++
Sbjct: 505 LRIYDGEKFVDSMTEIGKQYGVILDKTCFYAEQGGQEFDTGKLV 548
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 60 PESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
P S+ + S+EFCGGTH+A + +F I E IAKG IV+ G +
Sbjct: 706 PTSEEWQKYSIEFCGGTHVAKTSDIKEFVIVEESGIAKGIRRIVAVSGPEA 756
>gi|134083795|emb|CAK47129.1| unnamed protein product [Aspergillus niger]
Length = 961
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 25/135 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
D V G + GI+LD++NFYAEQGGQ D G ++ ++ +S++E+ L + Y L
Sbjct: 519 TDEVPDGEQLGIILDRTNFYAEQGGQENDTGKIV-IDGQSELEVGDVQLY----AGYVLH 573
Query: 386 I-FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F+++ + VGD + D RR PI +NHT THILN AL
Sbjct: 574 TGFMKYG-------------------SFSVGDTVICEYDELRRWPIRNNHTGTHILNFAL 614
Query: 445 RFVLGPEADQKGSLV 459
R VLG +QKGSLV
Sbjct: 615 RTVLGDGVEQKGSLV 629
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
AK + L G WRLYDT+GFPVDLT++M EE+GL +D +E+A+ +A+ Q
Sbjct: 407 AKAKGADKLHGADVWRLYDTFGFPVDLTRIMAEERGLQIDDREFEEARSRAKEASRGQK- 465
Query: 66 METSVE 71
+TS E
Sbjct: 466 -KTSAE 470
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
D V G + GI+LD++NFYAEQGGQ D G ++
Sbjct: 519 TDEVPDGEQLGIILDRTNFYAEQGGQENDTGKIV 552
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 288 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
D V G + GI+LD++NFYAEQGGQ D G
Sbjct: 519 TDEVPDGEQLGIILDRTNFYAEQGGQENDTG 549
>gi|254360816|ref|ZP_04976963.1| alanine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|261495705|ref|ZP_05992149.1| alanine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|452745287|ref|ZP_21945123.1| alanyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
gi|153092290|gb|EDN73359.1| alanine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|261308617|gb|EEY09876.1| alanine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|452086680|gb|EME03067.1| alanyl-tRNA ligase [Mannheimia haemolytica serotype 6 str. H23]
Length = 875
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 75/155 (48%), Gaps = 24/155 (15%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G SN + V+S+ SG A ++LDK+ FYAE GGQ+ D G QI + +
Sbjct: 472 GLFSNGKSVESIQSGENAVVILDKTPFYAEMGGQVGDSG---------QISAEICNFEVV 522
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
+ KY +F S +L VGDK+ +D RR I NH+AT
Sbjct: 523 DTQKYG-QVFGHIG--------------QLTSGSLSVGDKVNTIVDRERRHAITLNHSAT 567
Query: 438 HILNHALRFVLGPEADQKGSLVYRYHLHENIMECE 472
H+L+ ALR VLG QKGSLV L +I + E
Sbjct: 568 HLLHSALRQVLGDHVAQKGSLVSENILRFDISQPE 602
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 30/161 (18%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AK+ E+ L G+VA++LYDTYGFP+DLT + E+ + +D + + +A+ AQ E
Sbjct: 379 EALAKV-ENNTLSGEVAFKLYDTYGFPLDLTADVCRERDIKIDEDGF-NAEMTAQRERAK 436
Query: 63 QAG-----------METSVEFCGGTHLAM--AHHVGDFCI-SSEEAIAKGSNIV------ 102
+ +++ F G T ++ A +G F S E+I G N V
Sbjct: 437 ASSSFGTDYNNVIKVDSKTCFSGYTETSLNDATVIGLFSNGKSVESIQSGENAVVILDKT 496
Query: 103 SYCGSKGTFQSHSGSINDEMVNKYPSLYRLFRTVHKQKYVQ 143
+ G SG I+ E+ N F V QKY Q
Sbjct: 497 PFYAEMGGQVGDSGQISAEICN--------FEVVDTQKYGQ 529
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 274 DEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS----NKQFVDSV 329
++ TV+GL N + V+S+ SG A ++LDK+ FYAE GGQ+ D G +S N + VD+
Sbjct: 466 NDATVIGLFSNGKSVESIQSGENAVVILDKTPFYAEMGGQVGDSGQISAEICNFEVVDTQ 525
Query: 330 SSG 332
G
Sbjct: 526 KYG 528
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 267
N + V+S+ SG A ++LDK+ FYAE GGQ+ D G
Sbjct: 476 NGKSVESIQSGENAVVILDKTPFYAEMGGQVGDSG 510
>gi|410727168|ref|ZP_11365390.1| alanine--tRNA ligase [Clostridium sp. Maddingley MBC34-26]
gi|410599198|gb|EKQ53754.1| alanine--tRNA ligase [Clostridium sp. Maddingley MBC34-26]
Length = 879
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 73/147 (49%), Gaps = 23/147 (15%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + F ++++ G +A I+ D + YAE GGQI D+G + ND + + F + N+
Sbjct: 474 LIEGEDFTETITEGDKAIIVTDVTPLYAEMGGQIGDKGIIF--NDSFKANV-FDTKKNIG 530
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G K+V + LS L+VGDK+ + +D RR I NHTATH
Sbjct: 531 G--------------------KIVHFVEVLSGELKVGDKVTIEVDKTRRENIKKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLVYRYHLH 465
+L+ AL VLG Q GSLV L
Sbjct: 571 LLDKALTVVLGSHVHQAGSLVTDERLR 597
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 47/72 (65%), Gaps = 6/72 (8%)
Query: 5 IAKLGES--KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA----KKKAQS 58
I++L E KVL G ++LYDT+GFP++LT+ ++E++ LS+D + + + +++A+S
Sbjct: 374 ISELKEKNEKVLSGADGFKLYDTFGFPMELTKEILEDEDLSLDEDAFHEEMKIQRERARS 433
Query: 59 EPESQAGMETSV 70
++ M T V
Sbjct: 434 ARKTSNYMGTDV 445
>gi|261492574|ref|ZP_05989127.1| alanine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261311733|gb|EEY12883.1| alanine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 875
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 75/155 (48%), Gaps = 24/155 (15%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G SN + V+S+ SG A ++LDK+ FYAE GGQ+ D G QI + +
Sbjct: 472 GLFSNGKSVESIQSGENAVVILDKTPFYAEMGGQVGDSG---------QISAEICNFEVV 522
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
+ KY +F S +L VGDK+ +D RR I NH+AT
Sbjct: 523 DTQKYG-QVFGHIG--------------QLTSGSLSVGDKVNTIVDRERRHAITLNHSAT 567
Query: 438 HILNHALRFVLGPEADQKGSLVYRYHLHENIMECE 472
H+L+ ALR VLG QKGSLV L +I + E
Sbjct: 568 HLLHSALRQVLGDHVAQKGSLVSENILRFDISQPE 602
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 75/161 (46%), Gaps = 30/161 (18%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AK+ E+ L G+VA++LYDTYGFP+DLT + E+ + +D + + +A+ AQ E
Sbjct: 379 EALAKV-ENNTLSGEVAFKLYDTYGFPLDLTADVCRERDIKIDEDGF-NAEMTAQRERAK 436
Query: 63 QAG-----------METSVEFCGGTHLAM--AHHVGDFCI-SSEEAIAKGSNIV------ 102
+ +++ F G T ++ A +G F S E+I G N V
Sbjct: 437 ASSSFGTDYNNVIKVDSKTCFSGYTETSLNDATVIGLFSNGKSVESIQSGENAVVILDKT 496
Query: 103 SYCGSKGTFQSHSGSINDEMVNKYPSLYRLFRTVHKQKYVQ 143
+ G SG I+ E+ N F V QKY Q
Sbjct: 497 PFYAEMGGQVGDSGQISAEICN--------FEVVDTQKYGQ 529
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 274 DEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS----NKQFVDSV 329
++ TV+GL N + V+S+ SG A ++LDK+ FYAE GGQ+ D G +S N + VD+
Sbjct: 466 NDATVIGLFSNGKSVESIQSGENAVVILDKTPFYAEMGGQVGDSGQISAEICNFEVVDTQ 525
Query: 330 SSG 332
G
Sbjct: 526 KYG 528
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 267
N + V+S+ SG A ++LDK+ FYAE GGQ+ D G
Sbjct: 476 NGKSVESIQSGENAVVILDKTPFYAEMGGQVGDSG 510
>gi|350633253|gb|EHA21619.1| hypothetical protein ASPNIDRAFT_51231 [Aspergillus niger ATCC 1015]
Length = 791
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 72/134 (53%), Gaps = 25/134 (18%)
Query: 327 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPI 386
D V G + GI+LD++NFYAEQGGQ D G ++ ++ +S++E+ L + Y L
Sbjct: 350 DEVPDGEQLGIILDRTNFYAEQGGQENDTGKIV-IDGQSELEVGDVQLY----AGYVLHT 404
Query: 387 -FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
F+++ + VGD + D RR PI +NHT THILN ALR
Sbjct: 405 GFMKYG-------------------SFSVGDTVICEYDELRRWPIRNNHTGTHILNFALR 445
Query: 446 FVLGPEADQKGSLV 459
VLG +QKGSLV
Sbjct: 446 TVLGDGVEQKGSLV 459
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
AK + L G WRLYDT+GFPVDLT++M EE+GL +D +E+A+ +A+ Q
Sbjct: 237 AKAKGADKLHGADVWRLYDTFGFPVDLTRIMAEERGLQIDDREFEEARSRAKEASRGQK- 295
Query: 66 METSVE 71
+TS E
Sbjct: 296 -KTSAE 300
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 238 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
D V G + GI+LD++NFYAEQGGQ D G ++
Sbjct: 350 DEVPDGEQLGIILDRTNFYAEQGGQENDTGKIV 382
Score = 42.0 bits (97), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 289 DSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
D V G + GI+LD++NFYAEQGGQ D G
Sbjct: 350 DEVPDGEQLGIILDRTNFYAEQGGQENDTG 379
>gi|432373270|ref|ZP_19616308.1| alanyl-tRNA synthetase [Escherichia coli KTE11]
gi|430895276|gb|ELC17547.1| alanyl-tRNA synthetase [Escherichia coli KTE11]
Length = 876
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 85/154 (55%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGASFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 67/153 (43%), Gaps = 15/153 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDEMVNKYPSLYRLFRTVHKQKYVQ 143
+ G + D+ K S F QKY Q
Sbjct: 499 YAESGGQVGDKGELKGASFS--FAVEDTQKYGQ 529
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGASF 517
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G +
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAS 516
>gi|421724108|ref|ZP_16163347.1| alanyl-tRNA ligase [Klebsiella oxytoca M5al]
gi|410375088|gb|EKP29730.1| alanyl-tRNA ligase [Klebsiella oxytoca M5al]
Length = 875
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/134 (38%), Positives = 75/134 (55%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD+V++G EA ++LD++ FYAE GGQ+ D+G + G FS VN + KY
Sbjct: 480 VDAVNAGQEAVVILDQTPFYAESGGQVGDKGELKGAG--------FSFQVN-DAQKYGQA 530
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I ++ K +L+VGD ++ +D ARR+ I NH+ATH+++ ALR
Sbjct: 531 I------GHIGK---------VTGGSLKVGDAVQADVDEARRQRIRLNHSATHLMHAALR 575
Query: 446 FVLGPEADQKGSLV 459
VLG QKGSLV
Sbjct: 576 QVLGTHVAQKGSLV 589
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEPGFEAAMEEQRRRARE 438
Query: 63 QAG 65
+G
Sbjct: 439 SSG 441
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VD+V++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VDAVNAGQEAVVILDQTPFYAESGGQVGDKGELKGA 515
>gi|432598844|ref|ZP_19835115.1| alanyl-tRNA synthetase [Escherichia coli KTE62]
gi|431128714|gb|ELE30890.1| alanyl-tRNA synthetase [Escherichia coli KTE62]
Length = 876
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 82/154 (53%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++L+++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLEQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD ++ A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFDAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLEQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++L+++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLEQTPFYAESGGQVGDKGELKGANF 517
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++L+++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLEQTPFYAESGGQVGDKGELKGAN 516
>gi|46108048|ref|XP_381082.1| hypothetical protein FG00906.1 [Gibberella zeae PH-1]
Length = 957
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 73/132 (55%), Gaps = 25/132 (18%)
Query: 329 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPI-F 387
V T G+L+DK+NFYAE GGQ+ D G ++ ++D ++ ++ + N G Y L +
Sbjct: 519 VPEKTALGLLIDKTNFYAESGGQVADTGRIV-IDDVAEFKVL--DVQNYGG--YVLHNGY 573
Query: 388 LQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFV 447
+++ TL GDK+ D RR PI +NH+ THILNH+LR V
Sbjct: 574 IEYG-------------------TLSSGDKVICEYDELRRSPIRNNHSGTHILNHSLREV 614
Query: 448 LGPEADQKGSLV 459
LG E +QKGSLV
Sbjct: 615 LGDEVNQKGSLV 626
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSV 70
+K L GDV WRLYDT+GFPVDLT+LM EE+ L +D E + A+ KA+ E+ ++ SV
Sbjct: 409 AKKLQGDVVWRLYDTFGFPVDLTRLMAEERNLEIDDEEVKAAQDKAR---EASKAVKESV 465
Query: 71 E 71
+
Sbjct: 466 Q 466
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
++P+ + SVEFCGGTH+ + D + E IAKG I++Y G
Sbjct: 705 ADPKKPEWRQYSVEFCGGTHVEQTGLIKDLILIEESGIAKGIRRIIAYTG 754
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 240 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
V T G+L+DK+NFYAE GGQ+ D G ++
Sbjct: 519 VPEKTALGLLIDKTNFYAESGGQVADTGRIV 549
>gi|309786227|ref|ZP_07680855.1| alanyl-tRNA synthetase [Shigella dysenteriae 1617]
gi|308925972|gb|EFP71451.1| alanyl-tRNA synthetase [Shigella dysenteriae 1617]
Length = 784
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 82/153 (53%), Gaps = 29/153 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G +A ++LD++ FYAE GGQ+ D+G + G N FS +V + KY
Sbjct: 388 VDAINAGQDAVVVLDQTPFYAESGGQVGDKGELKGAN--------FSFVVE-DTQKYGQA 438
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I L+ + +L+VGD ++ +D ARR I NH+ATH+++ ALR
Sbjct: 439 IGHIGKLA---------------AGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALR 483
Query: 446 FVLGPEADQKGSL----VYRYHL-HENIMECEE 473
VLG QKGSL V R+ H M+ EE
Sbjct: 484 QVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 516
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G + V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQDAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G +A ++LD++ FYAE GGQ+ D+G + F
Sbjct: 376 GKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQVGDKGELKGANF 425
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G +A ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 388 VDAINAGQDAVVVLDQTPFYAESGGQVGDKGELKGAN 424
>gi|345300550|ref|YP_004829908.1| alanyl-tRNA synthetase [Enterobacter asburiae LF7a]
gi|345094487|gb|AEN66123.1| alanyl-tRNA synthetase [Enterobacter asburiae LF7a]
Length = 875
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 75/134 (55%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDS+S+G +A ++LDK+ FYAE GGQ+ D+G + G FS V + KY
Sbjct: 480 VDSISAGQDAVVILDKTPFYAESGGQVGDKGELKGDG--------FSFSVT-DTQKYGQA 530
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I Q L +S +L+VG+ ++ ++D ARR I NH+ATH+++ ALR
Sbjct: 531 IGHQGKL---------------VSGSLKVGEGVQANVDEARRARIRLNHSATHLMHAALR 575
Query: 446 FVLGPEADQKGSLV 459
VLG QKGSLV
Sbjct: 576 DVLGTHVAQKGSLV 589
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 62/131 (47%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-KGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGT 110
+G ++ + EF G +L + V + S ++I+ G + V
Sbjct: 439 SSGFGADYNAMIRVDGASEFKGYDNLELTGKVTALFVDGKSVDSISAGQDAVVILDKTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VDS+S+G +A ++LDK+ FYAE GGQ+ D+G + F SV+ +
Sbjct: 468 GKVTALFVDGKSVDSISAGQDAVVILDKTPFYAESGGQVGDKGELKGDGFSFSVTDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VDS+S+G +A ++LDK+ FYAE GGQ+ D+G + G
Sbjct: 480 VDSISAGQDAVVILDKTPFYAESGGQVGDKGELKG 514
>gi|396460228|ref|XP_003834726.1| similar to alanyl-tRNA synthetase [Leptosphaeria maculans JN3]
gi|312211276|emb|CBX91361.1| similar to alanyl-tRNA synthetase [Leptosphaeria maculans JN3]
Length = 925
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 99/219 (45%), Gaps = 43/219 (19%)
Query: 247 GILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNF 306
G +D + AE+ G + + DE R K+ + A I L K +
Sbjct: 332 GFPIDLTKLIAEEQG--------LHIKDEEVSAAQRGEKKVNSQTTVHDLASIALRKISK 383
Query: 307 YAEQGGQIYDEGFMSNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 363
++ G +G + ++ V G E G+LL K+NFYA+ GGQ +D G ++ N
Sbjct: 384 RSDTGDT---QGHLLQQKVCQKHLEVPQGEEFGVLLHKTNFYAKSGGQQFDTGRLVIDN- 439
Query: 364 ESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHT--LSH-TLRVGDKLKL 420
+ + N++ K V LHT L + +L VGD+L
Sbjct: 440 -----------------------LAELDVRNVQSYKGYV--LHTGFLKYGSLAVGDELLA 474
Query: 421 HIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
D +RR+PI NHT THILN ALR VLG E +Q GSL+
Sbjct: 475 EYDESRRQPIRMNHTGTHILNFALREVLGKEVEQHGSLL 513
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 5/60 (8%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSV 70
SK L G WRLYD YGFP+DLT+L+ EE+GL + +D + A E + +T+V
Sbjct: 316 SKYLHGAYVWRLYDIYGFPIDLTKLIAEEQGLHI-----KDEEVSAAQRGEKKVNSQTTV 370
>gi|296806327|ref|XP_002843973.1| alanyl-tRNA synthetase [Arthroderma otae CBS 113480]
gi|238845275|gb|EEQ34937.1| alanyl-tRNA synthetase [Arthroderma otae CBS 113480]
Length = 963
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 74/140 (52%), Gaps = 26/140 (18%)
Query: 323 KQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEG 379
K+ +DS + + + GI+LDK+NFYAEQGGQ YD G +I ++ ++++++ V + G
Sbjct: 519 KEVIDSTKDIPANEQIGIILDKTNFYAEQGGQEYDTGKII-IDGQAELDV---QNVQMYG 574
Query: 380 SKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHI 439
F+++ V D + D RR PI +NHT THI
Sbjct: 575 GYVLHTGFIKYG-------------------NFSVNDSVIAEYDELRRWPIRNNHTGTHI 615
Query: 440 LNHALRFVLGPEADQKGSLV 459
LN ALR VLG DQKGSLV
Sbjct: 616 LNFALREVLGDGIDQKGSLV 635
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 42/62 (67%), Gaps = 1/62 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
Q + G K+ DV WRLYDT+GFPVDLT+LM EE+ L++D +E+A+ KA+ +
Sbjct: 412 QQALEAGAGKLHGADV-WRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEARLKAKEASKG 470
Query: 63 QA 64
QA
Sbjct: 471 QA 472
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ K+ +DS + + + GI+LDK+NFYAEQGGQ YD G +I
Sbjct: 517 HGKEVIDSTKDIPANEQIGIILDKTNFYAEQGGQEYDTGKII 558
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 276 GTVVGLRYNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+ + + K+ +DS + + + GI+LDK+NFYAEQGGQ YD G
Sbjct: 510 ANIKAICHGKEVIDSTKDIPANEQIGIILDKTNFYAEQGGQEYDTG 555
>gi|145220|gb|AAA03208.1| alanyl-tRNA synthetase [Escherichia coli]
Length = 876
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG KGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSHKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|320161086|ref|YP_004174310.1| alanyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
gi|319994939|dbj|BAJ63710.1| alanyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
Length = 911
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 71/138 (51%), Gaps = 24/138 (17%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q V SVS+G + +LL ++ FY E GGQ+ D G ++ VN+ W
Sbjct: 504 QRVSSVSAGDQVEVLLPRTGFYVEAGGQVSDAGTIVSVNEPR----W------------- 546
Query: 384 LPIFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+ ++ ++K +V + + T VGD + +DT RRR IM NHTATH+L+
Sbjct: 547 -----EIRVTEMRKPAAGVIVHVGEVVRGTPTVGDWVIARVDTQRRRDIMRNHTATHLLH 601
Query: 442 HALRFVLGPEADQKGSLV 459
L+ VLG A Q GSLV
Sbjct: 602 AELQEVLGEHARQAGSLV 619
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
Q V SVS+G + +LL ++ FY E GGQ+ D G ++ VN+
Sbjct: 504 QRVSSVSAGDQVEVLLPRTGFYVEAGGQVSDAGTIVSVNE 543
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA 52
K+L G A+ LY T+G P++LT+ + +E+GL VD + + DA
Sbjct: 399 KILDGKKAFDLYATHGLPLELTRDIAQEQGLDVDQQGFRDA 439
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 27/44 (61%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
EG ++ L Q V SVS+G + +LL ++ FY E GGQ+ D G
Sbjct: 493 EGELLALFREGQRVSSVSAGDQVEVLLPRTGFYVEAGGQVSDAG 536
>gi|389741925|gb|EIM83113.1| hypothetical protein STEHIDRAFT_149395 [Stereum hirsutum FP-91666
SS1]
Length = 958
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 72/137 (52%), Gaps = 25/137 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q +VS T GI+LD+++FYAE GGQ +D G ++ ++G
Sbjct: 519 QTTSNVSEDTSFGIILDRTSFYAESGGQEHDTGNIV-----------------IDG---- 557
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F F ++N++ V + L + L VGDK+ D RR P+ +NHTATHILN
Sbjct: 558 ---FADFEVTNVQVYNGYVLHIGYLKYGKLSVGDKVVASYDELRRWPLRNNHTATHILNF 614
Query: 443 ALRFVLGPEADQKGSLV 459
LR +LG DQ+GSLV
Sbjct: 615 CLREILGDHIDQRGSLV 631
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%), Gaps = 2/54 (3%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGME 67
L G WRLYDTYGFPVDLT+LM EE GL+++ +E A +A S+ S+A +
Sbjct: 416 LNGKDVWRLYDTYGFPVDLTRLMAEELGLTINEREFEAA--QASSKEASKASQK 467
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 268 FMIGVNDEGTVVGLRYNKQF---VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQ 324
F +G N E TV + ++K F +VS T GI+LD+++FYAE GGQ +D G +
Sbjct: 499 FSVG-NVEATVKAIYFSKSFFQTTSNVSEDTSFGIILDRTSFYAESGGQEHDTGNIVIDG 557
Query: 325 FVD 327
F D
Sbjct: 558 FAD 560
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 61 ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGS-NIVSYCG 106
ES TS+EFCGGTH+A + F + E IAKG+ I++ G
Sbjct: 713 ESPKWRSTSIEFCGGTHVARTGDIKQFVVIEESGIAKGTRRIIAVTG 759
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
Q +VS T GI+LD+++FYAE GGQ +D G ++
Sbjct: 519 QTTSNVSEDTSFGIILDRTSFYAESGGQEHDTGNIV 554
>gi|317036398|ref|XP_001398230.2| alanyl-tRNA synthetase, cytoplasmic [Aspergillus niger CBS 513.88]
Length = 1019
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 72/135 (53%), Gaps = 25/135 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
D V G + GI+LD++NFYAEQGGQ D G ++ ++ +S++E+ L + Y L
Sbjct: 577 TDEVPDGEQLGIILDRTNFYAEQGGQENDTGKIV-IDGQSELEVGDVQLY----AGYVLH 631
Query: 386 I-FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F+++ + VGD + D RR PI +NHT THILN AL
Sbjct: 632 TGFMKYG-------------------SFSVGDTVICEYDELRRWPIRNNHTGTHILNFAL 672
Query: 445 RFVLGPEADQKGSLV 459
R VLG +QKGSLV
Sbjct: 673 RTVLGDGVEQKGSLV 687
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
AK + L G WRLYDT+GFPVDLT++M EE+GL +D +E+A+ +A+ Q
Sbjct: 465 AKAKGADKLHGADVWRLYDTFGFPVDLTRIMAEERGLQIDDREFEEARSRAKEASRGQK- 523
Query: 66 METSVE 71
+TS E
Sbjct: 524 -KTSAE 528
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 24/34 (70%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
D V G + GI+LD++NFYAEQGGQ D G ++
Sbjct: 577 TDEVPDGEQLGIILDRTNFYAEQGGQENDTGKIV 610
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 288 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
D V G + GI+LD++NFYAEQGGQ D G
Sbjct: 577 TDEVPDGEQLGIILDRTNFYAEQGGQENDTG 607
>gi|417541247|ref|ZP_12193028.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
gi|353661146|gb|EHD00564.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Wandsworth str. A4-580]
Length = 900
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 491 VDAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 529
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 530 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 585
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 586 RQVLGTHVAQKGSLV 600
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA--KKKAQSEP 60
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A +++ ++
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 61 ESQAGMETSVEFCG 74
S G E + E G
Sbjct: 439 ASGFGAERAREASG 452
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
VD++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 491 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 526
>gi|187933980|ref|YP_001885372.1| alanyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
gi|205830030|sp|B2THN0.1|SYA_CLOBB RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|187722133|gb|ACD23354.1| alanine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
Length = 879
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 71/141 (50%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
++ + F DS++ G A ++ D + FYAE GGQI D G + N + +I + N+
Sbjct: 474 LVNGEDFADSITEGDNAVVVTDVTPFYAEMGGQIGDTGTIYNDNFKGKI---LDTKKNIG 530
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G K++ + +S L+VGDK+ L +D ARR I NHTATH
Sbjct: 531 G--------------------KIIHFVEAISGELKVGDKVTLEVDNARRENIKKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL VLG Q GS V
Sbjct: 571 LLDSALVKVLGSHVHQAGSYV 591
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 50/73 (68%), Gaps = 6/73 (8%)
Query: 5 IAKLGES--KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD----MEVYEDAKKKAQS 58
I++L E+ KVL G ++LYDT+GFP++LT+ ++E++GLS+D E ++ +++A+S
Sbjct: 374 ISELKENNEKVLKGADGFKLYDTFGFPMELTKEILEDEGLSLDEDGFHEEMKEQRERARS 433
Query: 59 EPESQAGMETSVE 71
++ M T V+
Sbjct: 434 ARKTSNYMGTDVK 446
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 5/70 (7%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYN-----KQFV 288
+ F DS++ G A ++ D + FYAE GGQI D G + N +G ++ + N FV
Sbjct: 478 EDFADSITEGDNAVVVTDVTPFYAEMGGQIGDTGTIYNDNFKGKILDTKKNIGGKIIHFV 537
Query: 289 DSVSSGTEAG 298
+++S + G
Sbjct: 538 EAISGELKVG 547
>gi|170765841|ref|ZP_02900652.1| alanyl-tRNA synthetase [Escherichia albertii TW07627]
gi|170124987|gb|EDS93918.1| alanyl-tRNA synthetase [Escherichia albertii TW07627]
Length = 876
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD +++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDVINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLNVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 11/92 (11%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHV 84
+G ++++ EF G HL ++ V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELSGKV 470
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD +++G EA ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDVINAGQEAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD +++G EA ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDVINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|401623423|gb|EJS41521.1| ala1p [Saccharomyces arboricola H-6]
Length = 958
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/137 (38%), Positives = 74/137 (54%), Gaps = 24/137 (17%)
Query: 324 QFVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
FV+ ++ G + G++LDK+ FYAEQGGQ YD G ++ ++D ++ + L N
Sbjct: 512 NFVEEITEQGKKYGVILDKTCFYAEQGGQEYDTGKIV-IDDVAEFNVENVQLYN------ 564
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +L++ K L VGDK+ D RR PI +NHT THILN
Sbjct: 565 ----GFVFHTGSLEEGK------------LSVGDKIIASFDELRRFPIKNNHTGTHILNL 608
Query: 443 ALRFVLGPEADQKGSLV 459
AL+ LG + DQKGSLV
Sbjct: 609 ALKETLGNDIDQKGSLV 625
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/47 (61%), Positives = 36/47 (76%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKA 56
ESK L G WRLYDTYGFPVDLT+LM EE+GL +D +E AK+++
Sbjct: 409 ESKTLDGKQVWRLYDTYGFPVDLTELMAEEQGLKIDGPGFEKAKQES 455
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEG 318
N E T++ L FV+ ++ G + G++LDK+ FYAEQGGQ YD G
Sbjct: 498 ANVESTILKLHDGTNFVEEITEQGKKYGVILDKTCFYAEQGGQEYDTG 545
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 228 LRFSYNKQFVDSVSS-GTEAGILLDKSNFYAEQGGQIYDEGFMI 270
L+ FV+ ++ G + G++LDK+ FYAEQGGQ YD G ++
Sbjct: 505 LKLHDGTNFVEEITEQGKKYGVILDKTCFYAEQGGQEYDTGKIV 548
>gi|326471957|gb|EGD95966.1| alanyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
Length = 963
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 26/140 (18%)
Query: 323 KQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEG 379
K+ +DS + + + GI+LDK+NFYAEQGGQ YD G ++ ++ ++++++ V + G
Sbjct: 519 KEVIDSTKDIPANEQIGIILDKTNFYAEQGGQEYDTGKIV-IDGQAELDV---QNVQMYG 574
Query: 380 SKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHI 439
F+++ V D + D RR PI +NHT THI
Sbjct: 575 GYVLHTGFIKYG-------------------NFSVNDSVIAEYDELRRWPIRNNHTGTHI 615
Query: 440 LNHALRFVLGPEADQKGSLV 459
LN ALR VLG DQKGSLV
Sbjct: 616 LNFALREVLGDGVDQKGSLV 635
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
G K+ DV WRLYDT+GFPVDLT+LM EE+ L++D +E+A+ KA+ + QA
Sbjct: 418 GAGKLHGADV-WRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEARLKAKEASKGQA 472
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ K+ +DS + + + GI+LDK+NFYAEQGGQ YD G ++
Sbjct: 517 HGKEVIDSTKDIPANEQIGIILDKTNFYAEQGGQEYDTGKIV 558
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 276 GTVVGLRYNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+ + + K+ +DS + + + GI+LDK+NFYAEQGGQ YD G
Sbjct: 510 ANIKAICHGKEVIDSTKDIPANEQIGIILDKTNFYAEQGGQEYDTG 555
>gi|326477176|gb|EGE01186.1| alanyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
Length = 963
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 26/140 (18%)
Query: 323 KQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEG 379
K+ +DS + + + GI+LDK+NFYAEQGGQ YD G ++ ++ ++++++ V + G
Sbjct: 519 KEVIDSTKDIPANEQIGIILDKTNFYAEQGGQEYDTGKIV-IDGQAELDV---QNVQMYG 574
Query: 380 SKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHI 439
F+++ V D + D RR PI +NHT THI
Sbjct: 575 GYVLHTGFIKYG-------------------NFSVNDSVIAEYDELRRWPIRNNHTGTHI 615
Query: 440 LNHALRFVLGPEADQKGSLV 459
LN ALR VLG DQKGSLV
Sbjct: 616 LNFALREVLGDGVDQKGSLV 635
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
G K+ DV WRLYDT+GFPVDLT+LM EE+ L++D +E+A+ KA+ + QA
Sbjct: 418 GAGKLHGADV-WRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEARLKAKEASKGQA 472
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ K+ +DS + + + GI+LDK+NFYAEQGGQ YD G ++
Sbjct: 517 HGKEVIDSTKDIPANEQIGIILDKTNFYAEQGGQEYDTGKIV 558
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 276 GTVVGLRYNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+ + + K+ +DS + + + GI+LDK+NFYAEQGGQ YD G
Sbjct: 510 ANIKAICHGKEVIDSTKDIPANEQIGIILDKTNFYAEQGGQEYDTG 555
>gi|307249853|ref|ZP_07531828.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|306858107|gb|EFM90188.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 4
str. M62]
Length = 874
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 80/153 (52%), Gaps = 31/153 (20%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G SN + VD++ SG A I+LD++ FYAE GGQ+ D G L++
Sbjct: 471 GLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSG-----------------LIST 513
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTA 436
E F++++ +K ++ + L S +L +GDK+ + RR I +NH+A
Sbjct: 514 E--------ICNFTVNDTQKYGQVFGHIGQLTSGSLSIGDKVTATVHATRRIAITANHSA 565
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLHENIM 469
TH+L+ ALR VLG QKGSLV ENI+
Sbjct: 566 THLLHSALREVLGDHVAQKGSLV-----SENIL 593
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
+ T+VGL N + VD++ SG A I+LD++ FYAE GGQ+ D G +S +
Sbjct: 466 QATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLISTE 514
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
E+ L G+VA++LYDTYGFP+DLT + E+ L++D +E A+ AQ E
Sbjct: 385 ENNTLSGEVAFKLYDTYGFPLDLTADVCRERELTIDEAGFE-AEMTAQRE 433
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N + VD++ SG A I+LD++ FYAE GGQ+ D G +
Sbjct: 475 NGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI 511
>gi|327304957|ref|XP_003237170.1| alanyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
gi|326460168|gb|EGD85621.1| alanyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
Length = 934
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 26/140 (18%)
Query: 323 KQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEG 379
K+ +DS + + + GI+LDK+NFYAEQGGQ YD G ++ ++ ++++++ V + G
Sbjct: 490 KEVIDSTKDIPANEQIGIILDKTNFYAEQGGQEYDTGKIV-IDGQAELDV---QNVQMYG 545
Query: 380 SKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHI 439
F+++ V D + D RR PI +NHT THI
Sbjct: 546 GYVLHTGFIKYG-------------------NFSVNDSVIAEYDELRRWPIRNNHTGTHI 586
Query: 440 LNHALRFVLGPEADQKGSLV 459
LN ALR VLG DQKGSLV
Sbjct: 587 LNFALREVLGDGVDQKGSLV 606
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
G K+ DV WRLYDT+GFPVDLT+LM EE+ L++D +E+A+ KA+ + QA
Sbjct: 389 GAGKLHGADV-WRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEARLKAKEASKGQA 443
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ K+ +DS + + + GI+LDK+NFYAEQGGQ YD G ++
Sbjct: 488 HGKEVIDSTKDIPANEQIGIILDKTNFYAEQGGQEYDTGKIV 529
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 276 GTVVGLRYNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+ + + K+ +DS + + + GI+LDK+NFYAEQGGQ YD G
Sbjct: 481 ANIKAICHGKEVIDSTKDIPANEQIGIILDKTNFYAEQGGQEYDTG 526
>gi|165976064|ref|YP_001651657.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|205829970|sp|B0BNS8.1|SYA_ACTPJ RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|165876165|gb|ABY69213.1| alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
Length = 874
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 80/153 (52%), Gaps = 31/153 (20%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G SN + VD++ SG A I+LD++ FYAE GGQ+ D G L++
Sbjct: 471 GLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSG-----------------LIST 513
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTA 436
E F++++ +K ++ + L S +L +GDK+ + RR I +NH+A
Sbjct: 514 E--------ICNFTVNDTQKYGQVFGHIGQLTSGSLSIGDKVTATVHATRRIAITANHSA 565
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLHENIM 469
TH+L+ ALR VLG QKGSLV ENI+
Sbjct: 566 THLLHSALREVLGDHVAQKGSLV-----SENIL 593
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
+ T+VGL N + VD++ SG A I+LD++ FYAE GGQ+ D G +S +
Sbjct: 466 QATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLISTE 514
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
E+ L G+VA++LYDTYGFP+DLT + E+ L++D +E A+ AQ E
Sbjct: 385 ENNTLSGEVAFKLYDTYGFPLDLTADVCRERELTIDEAGFE-AEMTAQRE 433
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N + VD++ SG A I+LD++ FYAE GGQ+ D G +
Sbjct: 475 NGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI 511
>gi|82778066|ref|YP_404415.1| alanyl-tRNA synthetase [Shigella dysenteriae Sd197]
gi|123561812|sp|Q32CN1.1|SYA_SHIDS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|81242214|gb|ABB62924.1| alanyl-tRNA synthetase [Shigella dysenteriae Sd197]
Length = 876
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 82/153 (53%), Gaps = 29/153 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G +A ++LD++ FYAE GGQ+ D+G + G N FS +V + KY
Sbjct: 480 VDAINAGQDAVVVLDQTPFYAESGGQVGDKGELKGAN--------FSFVVE-DTQKYGQA 530
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I L+ + +L+VGD ++ +D ARR I NH+ATH+++ ALR
Sbjct: 531 IGHIGKLA---------------AGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALR 575
Query: 446 FVLGPEADQKGSL----VYRYHL-HENIMECEE 473
VLG QKGSL V R+ H M+ EE
Sbjct: 576 QVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G + V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQDAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G +A ++LD++ FYAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQDAVVVLDQTPFYAESGGQVGDKGELKGANF 517
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G +A ++LD++ FYAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQDAVVVLDQTPFYAESGGQVGDKGELKGAN 516
>gi|417123258|ref|ZP_11972168.1| alanine--tRNA ligase [Escherichia coli 97.0246]
gi|386146649|gb|EIG93094.1| alanine--tRNA ligase [Escherichia coli 97.0246]
Length = 876
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/153 (35%), Positives = 82/153 (53%), Gaps = 29/153 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ +YAE GGQ+ D+G + G N FS +V + KY
Sbjct: 480 VDAINAGQEAVVVLDQTPYYAESGGQVGDKGELKGAN--------FSFVVE-DTQKYGQA 530
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I L+ + +L+VGD ++ +D ARR I NH+ATH+++ ALR
Sbjct: 531 IGHIGKLA---------------AGSLKVGDAVQADVDEARRARIRLNHSATHLMHAALR 575
Query: 446 FVLGPEADQKGSL----VYRYHL-HENIMECEE 473
VLG QKGSL V R+ H M+ EE
Sbjct: 576 QVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPY 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 33/50 (66%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ +YAE GGQ+ D+G + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPYYAESGGQVGDKGELKGANF 517
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ +YAE GGQ+ D+G + G N
Sbjct: 480 VDAINAGQEAVVVLDQTPYYAESGGQVGDKGELKGAN 516
>gi|393230342|gb|EJD37949.1| hypothetical protein AURDEDRAFT_116636 [Auricularia delicata
TFB-10046 SS5]
Length = 954
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/142 (38%), Positives = 72/142 (50%), Gaps = 28/142 (19%)
Query: 322 NKQFVDSVSSGTEA---GILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
NK FV S TE G++LD++NFYAE GGQ D G ++ ++ E+
Sbjct: 515 NKSFVQSTKDITEGESFGVILDRTNFYAEAGGQENDTGSIV-IDGEAA------------ 561
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTAT 437
F +SN++ V + L TL+VGD + D RR P+ +NHTAT
Sbjct: 562 -----------FEVSNVQAFNGYVLHVGELKEGTLKVGDTVLPMYDELRRWPLRNNHTAT 610
Query: 438 HILNHALRFVLGPEADQKGSLV 459
HILN LR LG DQKGSLV
Sbjct: 611 HILNFCLRETLGDHIDQKGSLV 632
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
A+ +K L G WRLYDTYGFPVDLT+LM EE GL ++ +E A+
Sbjct: 406 ARESGAKELGGKDVWRLYDTYGFPVDLTRLMAEELGLGINEADFEAAR 453
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 61 ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
E+ TS+EFCGGTH+A + DF I+ E IAKG I++ G
Sbjct: 714 ENPKWRSTSIEFCGGTHVAETGTIKDFIITEESGIAKGIRRIIAVTG 760
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDSVSSGTEA---GILLDKSNFYAEQGGQIYDEGFMI 270
YNK FV S TE G++LD++NFYAE GGQ D G ++
Sbjct: 514 YNKSFVQSTKDITEGESFGVILDRTNFYAEAGGQENDTGSIV 555
>gi|334183197|ref|NP_001185186.1| Alanyl-tRNA synthetase [Arabidopsis thaliana]
gi|332194404|gb|AEE32525.1| Alanyl-tRNA synthetase [Arabidopsis thaliana]
Length = 963
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 108/234 (46%), Gaps = 42/234 (17%)
Query: 247 GILLDKSNFYAEQGGQIYD-EGFMIGVNDEGTVVGLRYNKQF-------VDSVSSGTEAG 298
G LD + AE+ G + D +GF + + NKQ D+ S+ +AG
Sbjct: 423 GFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTLHKAG 482
Query: 299 ILLDKSNF----YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYD 354
+ +F + + ++ + + F++S ++ G++L ++FYAEQGGQI+D
Sbjct: 483 VSATDDSFKYIWFQDHESEL--KAIYTGSTFLESSAASDNVGLVLGSTSFYAEQGGQIFD 540
Query: 355 EGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHT--- 411
G +EGS F F++ N++ V + LS
Sbjct: 541 TGL-------------------IEGS------FGTFNVCNVQIFGGFVLHIGYLSKETGE 575
Query: 412 LRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
+ VGDK+ +D RR+ I NHT TH+LN+AL+ VLG DQKGS+V L
Sbjct: 576 VSVGDKVICKVDYERRKLIAPNHTCTHMLNYALKEVLGDHIDQKGSIVLPEKLR 629
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 4/60 (6%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQSEPESQAG 65
+ L GD A+ L+DTYGFP+DLTQLM EE+GL VD++ + E+A+++++S QAG
Sbjct: 406 QGNTLSGDDAFILWDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAG 465
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQS 113
++PE+ S EFCGGTH+ F + SEE IAKG V+ ++ F +
Sbjct: 702 ADPENNEWSLLSSEFCGGTHITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDA 757
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 236 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
F++S ++ G++L ++FYAEQGGQI+D G + G
Sbjct: 511 FLESSAASDNVGLVLGSTSFYAEQGGQIFDTGLIEG 546
>gi|145346253|ref|XP_001417607.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577834|gb|ABO95900.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 967
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 67/149 (44%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEA-GILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
MS F+ S S G +D + FYAE GGQ+ D G +
Sbjct: 526 AIMSPSGFIKSTSDAEGPYGFFMDATTFYAESGGQVCDSGL----------------ITT 569
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
GS S+S++K V +S T+ VGD K +D RR IM NHT
Sbjct: 570 PSGS---------MSVSDVKVAAAYVMHTGDVSGTVSVGDAAKCAVDYDRRDNIMPNHTM 620
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+LN+ALR V+G DQKGSLV L
Sbjct: 621 THVLNYALRKVMGDGVDQKGSLVDEEKLR 649
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
AK V+ G A+ L+++YGFP DLT+LM EE G ++D E + A +AQ +S+AG
Sbjct: 423 AKQEGRTVISGPEAFLLWESYGFPNDLTELMAEENGFTLDNEGFAQAFAEAQE--KSRAG 480
Query: 66 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQSHSGSI 118
+ S GG L + ++ AI K Y + T +S +I
Sbjct: 481 GKKS----GGVQLLFEAEATAWLQNNGVAITKDEE--KYASGRPTLESTVTAI 527
>gi|397163633|ref|ZP_10487091.1| alanine--tRNA ligase [Enterobacter radicincitans DSM 16656]
gi|396094188|gb|EJI91740.1| alanine--tRNA ligase [Enterobacter radicincitans DSM 16656]
Length = 784
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 77/135 (57%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 388 VNAIAAGQEAVVVLDETPFYAESGGQVGDKG-------------------ELKGNGFT-- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ TL+VGD +K +D ARR I NH+ATH+++ AL
Sbjct: 427 ----FTVQDTQKYGQAIGHIGKLATGTLKVGDGVKAEVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 483 RTVLGTHVAQKGSLV 497
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ +RLYDTYGFP+DLT + E+ L +D +E A ++ +
Sbjct: 288 EELAKL-KGDTLDGETVFRLYDTYGFPMDLTADVCRERNLKIDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + AIA G V
Sbjct: 347 SSGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKPVNAIAAGQEAVVVLDETPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSV 329
G V L + + V+++++G EA ++LD++ FYAE GGQ+ D+G + F +V
Sbjct: 376 GKVTALFVDGKPVNAIAAGQEAVVVLDETPFYAESGGQVGDKGELKGNGFTFTV 429
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 388 VNAIAAGQEAVVVLDETPFYAESGGQVGDKGELKG 422
>gi|307256675|ref|ZP_07538454.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
str. D13039]
gi|306864723|gb|EFM96627.1| Alanyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar 10
str. D13039]
Length = 874
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 80/153 (52%), Gaps = 31/153 (20%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G SN + VD++ SG A I+LD++ FYAE GGQ+ D G L++
Sbjct: 471 GLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSG-----------------LIST 513
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTA 436
E F++++ +K ++ + L S +L +GDK+ + RR I +NH+A
Sbjct: 514 E--------ICNFAVNDTQKYGQVFGHIGQLTSGSLSIGDKVTATVHATRRIAITANHSA 565
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLHENIM 469
TH+L+ ALR VLG QKGSLV ENI+
Sbjct: 566 THLLHSALREVLGDHVAQKGSLV-----SENIL 593
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 34/49 (69%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
+ T+VGL N + VD++ SG A I+LD++ FYAE GGQ+ D G +S +
Sbjct: 466 QATIVGLFSNGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLISTE 514
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
E+ L G+VA++LYDTYGFP+DLT + E+ L++D +E A+ AQ E
Sbjct: 385 ENNTLSGEVAFKLYDTYGFPLDLTADVCRERELTIDEAGFE-AEMTAQRE 433
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N + VD++ SG A I+LD++ FYAE GGQ+ D G +
Sbjct: 475 NGKAVDTIQSGESAVIILDQTPFYAEMGGQVGDSGLI 511
>gi|30694735|ref|NP_175439.2| Alanyl-tRNA synthetase [Arabidopsis thaliana]
gi|21542451|sp|P36428.3|SYA_ARATH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS; Flags: Precursor
gi|332194403|gb|AEE32524.1| Alanyl-tRNA synthetase [Arabidopsis thaliana]
Length = 1003
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 108/234 (46%), Gaps = 42/234 (17%)
Query: 247 GILLDKSNFYAEQGGQIYD-EGFMIGVNDEGTVVGLRYNKQF-------VDSVSSGTEAG 298
G LD + AE+ G + D +GF + + NKQ D+ S+ +AG
Sbjct: 471 GFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTLHKAG 530
Query: 299 ILLDKSNF----YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYD 354
+ +F + + ++ + + F++S ++ G++L ++FYAEQGGQI+D
Sbjct: 531 VSATDDSFKYIWFQDHESEL--KAIYTGSTFLESSAASDNVGLVLGSTSFYAEQGGQIFD 588
Query: 355 EGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHT--- 411
G +EGS F F++ N++ V + LS
Sbjct: 589 TGL-------------------IEGS------FGTFNVCNVQIFGGFVLHIGYLSKETGE 623
Query: 412 LRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
+ VGDK+ +D RR+ I NHT TH+LN+AL+ VLG DQKGS+V L
Sbjct: 624 VSVGDKVICKVDYERRKLIAPNHTCTHMLNYALKEVLGDHIDQKGSIVLPEKLR 677
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 4/60 (6%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQSEPESQAG 65
+ L GD A+ L+DTYGFP+DLTQLM EE+GL VD++ + E+A+++++S QAG
Sbjct: 454 QGNTLSGDDAFILWDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAG 513
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQS 113
++PE+ S EFCGGTH+ F + SEE IAKG V+ ++ F +
Sbjct: 750 ADPENNEWSLLSSEFCGGTHITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDA 805
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 236 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
F++S ++ G++L ++FYAEQGGQI+D G + G
Sbjct: 559 FLESSAASDNVGLVLGSTSFYAEQGGQIFDTGLIEG 594
>gi|434386478|ref|YP_007097089.1| alanine--tRNA ligase [Chamaesiphon minutus PCC 6605]
gi|428017468|gb|AFY93562.1| alanine--tRNA ligase [Chamaesiphon minutus PCC 6605]
Length = 878
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 67/137 (48%), Gaps = 26/137 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+ + +G I+LDKS FYAE GGQI D G++ G N LV ++ K
Sbjct: 478 EVCEEADAGMNVQIVLDKSPFYAESGGQIGDRGYLSGDN----------LLVRIDDVKKE 527
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F+ F T+ LRVGD + IDTA RR +NHTATH+L
Sbjct: 528 SDFFVHFG---------------TIERGNLRVGDTITAQIDTACRRRAQANHTATHLLQA 572
Query: 443 ALRFVLGPEADQKGSLV 459
AL+ ++ PE Q GSLV
Sbjct: 573 ALKQLVDPEISQAGSLV 589
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 2/73 (2%)
Query: 16 GDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKK-KAQSEPESQAGMETSVEFCG 74
G A++LY TYGFP++LTQ + EE+GL+VD+E Y+ AK+ ++ P++ G++ +V+
Sbjct: 387 GADAFKLYGTYGFPLELTQEIAEEQGLTVDVEGYDRAKEDDIKNTPDTHGGIDLTVQ-GS 445
Query: 75 GTHLAMAHHVGDF 87
LA H DF
Sbjct: 446 LDKLADTIHATDF 458
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
VV L + + +G I+LDKS FYAE GGQI D G++S
Sbjct: 470 VVALLLAGEVCEEADAGMNVQIVLDKSPFYAESGGQIGDRGYLS 513
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
+ + +G I+LDKS FYAE GGQI D G++ G N
Sbjct: 478 EVCEEADAGMNVQIVLDKSPFYAESGGQIGDRGYLSGDN 516
>gi|449299241|gb|EMC95255.1| hypothetical protein BAUCODRAFT_25335 [Baudoinia compniacensis UAMH
10762]
Length = 1306
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 77/139 (55%), Gaps = 26/139 (18%)
Query: 324 QFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+FVDS +S + G++LD+++FYAEQGGQ D G ++ ++ E++I++ V +
Sbjct: 527 KFVDSTKEISESDQIGLILDRTSFYAEQGGQENDTGRIL-IDGEAEIDV---QNVQVYAG 582
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
F+ + + +VGD++ D RR+PI +NHT THIL
Sbjct: 583 YVMHTGFMNYG-------------------SFKVGDEVLCDYDELRRQPIRNNHTGTHIL 623
Query: 441 NHALRFVLGPEADQKGSLV 459
N ALR VLG E +Q+GSLV
Sbjct: 624 NFALREVLGDEVNQRGSLV 642
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
K ++K L G WRLYDTYGFPVDLT+LM EE+GL +D + +A++KA+
Sbjct: 421 KKTDAKELSGADVWRLYDTYGFPVDLTKLMAEERGLDIDDKAVAEAQEKAR 471
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 15/107 (14%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + G+ V+ E+ ED K+K S+EFCGGTH+
Sbjct: 701 ETYPDPVRVVSI-----GVPVE-ELLEDVKRKEWRS--------VSIEFCGGTHVKNTTE 746
Query: 84 VGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGSINDEMVNKYPSL 129
+ + I E IAKG IV+ G+ S D+ ++K ++
Sbjct: 747 IKELVILEESGIAKGIRRIVAVTGAAAHDVQREASEWDKKISKLETM 793
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 10/68 (14%)
Query: 213 LGDLSQTKHTPFVKR------LRFSY-NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQ 262
+ D+ +T +P +R +R Y +FVDS +S + G++LD+++FYAEQGGQ
Sbjct: 498 MPDVPKTDDSPKFQRENVHGVIRAIYVGGKFVDSTKEISESDQIGLILDRTSFYAEQGGQ 557
Query: 263 IYDEGFMI 270
D G ++
Sbjct: 558 ENDTGRIL 565
>gi|288940831|ref|YP_003443071.1| alanyl-tRNA synthetase [Allochromatium vinosum DSM 180]
gi|288896203|gb|ADC62039.1| alanyl-tRNA synthetase [Allochromatium vinosum DSM 180]
Length = 867
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 69/135 (51%), Gaps = 27/135 (20%)
Query: 327 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPI 386
D++ +G E ++LD+S FY E GGQ+ D G++ N E ++
Sbjct: 471 DALEAGEEGLVILDRSPFYGESGGQVGDRGWL-----------------NTETAR----- 508
Query: 387 FLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F + + +KK LV + L VGD++ +D RRR NH+ATH+L+ AL
Sbjct: 509 ---FGVQDTQKKGDGVLVHVGRVEEGALTVGDRVDARVDADRRRATALNHSATHLLHAAL 565
Query: 445 RFVLGPEADQKGSLV 459
R VLGP QKGSLV
Sbjct: 566 REVLGPHVQQKGSLV 580
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 11/82 (13%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA--KKKAQSEP 60
+ IA L ++ PG+ ++LYDTYGFPVDLT + E+GL++D+ +E A ++K ++
Sbjct: 370 EAIADLSGDQI-PGETVFKLYDTYGFPVDLTADIARERGLTLDVAGFEQAMERQKERARA 428
Query: 61 ESQAG--------METSVEFCG 74
SQ G ++ +FCG
Sbjct: 429 ASQFGSAQTLDIQIQGETDFCG 450
>gi|82545227|ref|YP_409174.1| alanyl-tRNA synthetase [Shigella boydii Sb227]
gi|416294458|ref|ZP_11650882.1| Alanyl-tRNA synthetase [Shigella flexneri CDC 796-83]
gi|417683289|ref|ZP_12332636.1| alanyl-tRNA synthetase [Shigella boydii 3594-74]
gi|420354261|ref|ZP_14855349.1| alanyl-tRNA synthetase [Shigella boydii 4444-74]
gi|421683857|ref|ZP_16123647.1| alanyl-tRNA synthetase [Shigella flexneri 1485-80]
gi|123558824|sp|Q31X62.1|SYA_SHIBS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|81246638|gb|ABB67346.1| alanyl-tRNA synthetase [Shigella boydii Sb227]
gi|320186483|gb|EFW61211.1| Alanyl-tRNA synthetase [Shigella flexneri CDC 796-83]
gi|332091817|gb|EGI96895.1| alanyl-tRNA synthetase [Shigella boydii 3594-74]
gi|391276188|gb|EIQ34964.1| alanyl-tRNA synthetase [Shigella boydii 4444-74]
gi|404337502|gb|EJZ63955.1| alanyl-tRNA synthetase [Shigella flexneri 1485-80]
Length = 876
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKDAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKDANF 517
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKDAN 516
>gi|398397461|ref|XP_003852188.1| alanine--tRNA ligase [Zymoseptoria tritici IPO323]
gi|339472069|gb|EGP87164.1| hypothetical protein MYCGRDRAFT_100210 [Zymoseptoria tritici
IPO323]
Length = 960
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 78/139 (56%), Gaps = 29/139 (20%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q V G + G++LD++NFYAEQGGQ D G ++ ++ E++I++ L YA
Sbjct: 517 QSTSEVPEGEQFGVVLDRTNFYAEQGGQENDTGRIL-IDGEAEIDVQNVQL-------YA 568
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHT--LSH-TLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
+ +HT +++ +L++ D++ D RR+PI +NHT THIL
Sbjct: 569 GYV------------------MHTGYMNYGSLKINDEILCEYDELRRQPIRNNHTGTHIL 610
Query: 441 NHALRFVLGPEADQKGSLV 459
N ALR VLG + +QKGSLV
Sbjct: 611 NFALREVLGDDINQKGSLV 629
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ--SEPESQAGME 67
+K + G WRLYDTYGFPVDLT+LM EE+GL ++ E ++A++KA+ S+ E +AG E
Sbjct: 412 AKEMSGADVWRLYDTYGFPVDLTKLMAEERGLDINEEDVKEAQEKAREASKGEKKAGAE 470
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 24/36 (66%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
Q V G + G++LD++NFYAEQGGQ D G ++
Sbjct: 517 QSTSEVPEGEQFGVVLDRTNFYAEQGGQENDTGRIL 552
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
+P++ + SVEFCGGTH+ + D + E IAKG IV G
Sbjct: 709 DPKNNDWTKVSVEFCGGTHVKNTTEIKDLVVLEESGIAKGIRRIVCVTG 757
>gi|1673365|emb|CAA80380.1| mitochondrial tRNA-Ala synthetase [Arabidopsis thaliana]
Length = 1003
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 108/234 (46%), Gaps = 42/234 (17%)
Query: 247 GILLDKSNFYAEQGGQIYD-EGFMIGVNDEGTVVGLRYNKQF-------VDSVSSGTEAG 298
G LD + AE+ G + D +GF + + NKQ D+ S+ +AG
Sbjct: 471 GFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTLHKAG 530
Query: 299 ILLDKSNF----YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYD 354
+ +F + + ++ + + F++S ++ G++L ++FYAEQGGQI+D
Sbjct: 531 VSATDDSFKYIWFQDHESEL--KAIYTGSTFLESSAASDNVGLVLGSTSFYAEQGGQIFD 588
Query: 355 EGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHT--- 411
G +EGS F F++ N++ V + LS
Sbjct: 589 TGL-------------------IEGS------FGTFNVCNVQIFGGFVLHIGYLSKETGE 623
Query: 412 LRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
+ VGDK+ +D RR+ I NHT TH+LN+AL+ VLG DQKGS+V L
Sbjct: 624 VSVGDKVICKVDYERRKLIAPNHTCTHMLNYALKEVLGDHIDQKGSIVLPEKLR 677
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 4/60 (6%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQSEPESQAG 65
+ L GD A+ L+DTYGFP+DLTQLM EE+GL VD++ + E+A+++++S QAG
Sbjct: 454 QGNTLSGDDAFILWDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAG 513
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQS 113
++PE+ S EFCGGTH+ F + SEE IAKG V+ ++ F +
Sbjct: 750 ADPENNEWSLLSSEFCGGTHITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDA 805
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 236 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
F++S ++ G++L ++FYAEQGGQI+D G + G
Sbjct: 559 FLESSAASDNVGLVLGSTSFYAEQGGQIFDTGLIEG 594
>gi|365971794|ref|YP_004953355.1| alanyl-tRNA synthetase [Enterobacter cloacae EcWSU1]
gi|365750707|gb|AEW74934.1| Alanyl-tRNA synthetase [Enterobacter cloacae EcWSU1]
Length = 875
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDS+++G +A ++LDK+ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VDSINAGQDAVVILDKTPFYAESGGQVGDKG-------------------ELKGNGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
FS+S+ +K + + L+ +L+VG+ ++ ++D ARR I NH+ATH+++ AL
Sbjct: 519 ----FSVSDTQKYGQAIGHQGKLTAGSLKVGEGVQANVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 REVLGTHVAQKGSLV 589
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-KGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG 65
+G
Sbjct: 439 SSG 441
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VDS+++G +A ++LDK+ FYAE GGQ+ D+G + F SVS +
Sbjct: 468 GKVTALFVDGKAVDSINAGQDAVVILDKTPFYAESGGQVGDKGELKGNGFSFSVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VDS+++G +A ++LDK+ FYAE GGQ+ D+G + G
Sbjct: 480 VDSINAGQDAVVILDKTPFYAESGGQVGDKGELKG 514
>gi|262273675|ref|ZP_06051488.1| alanyl-tRNA synthetase [Grimontia hollisae CIP 101886]
gi|262222090|gb|EEY73402.1| alanyl-tRNA synthetase [Grimontia hollisae CIP 101886]
Length = 860
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/153 (37%), Positives = 78/153 (50%), Gaps = 30/153 (19%)
Query: 312 GQIYDEGFMSNKQFVDSVSS-----GTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQ 366
G EG ++N FVD ++S EA I+LD++ FYAE GGQ D GF+ V + +
Sbjct: 461 GATEGEGLITNI-FVDGMASEALATADEAVIILDQTPFYAESGGQCGDTGFL--VTEAGK 517
Query: 367 IELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTAR 426
E+ ++ KY I + KLV TL VGD + +D R
Sbjct: 518 FEV-------IDTQKYGAAI---------GHRGKLV------DGTLSVGDTVDAKVDAER 555
Query: 427 RRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
R+ I NH+ATH+L+ ALR VLG QKGSLV
Sbjct: 556 RQAIALNHSATHLLHEALRVVLGEHVQQKGSLV 588
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+ KVL G+ ++LYDTYGFP DLT + E+G S+D E +E A +AQ + +AG
Sbjct: 385 DGKVLDGETVFKLYDTYGFPADLTNDVARERGFSIDEEGFE-AAMEAQRQRAREAG 439
>gi|420326967|ref|ZP_14828714.1| alanyl-tRNA synthetase [Shigella flexneri CCH060]
gi|391249145|gb|EIQ08382.1| alanyl-tRNA synthetase [Shigella flexneri CCH060]
Length = 876
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 81/154 (52%), Gaps = 31/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA ++LD++ FYAE GGQ+ D+G + N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKDAN----------------------- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 517 --FSFAVEDTQKYGQAIGHIGKLAAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSL----VYRYHL-HENIMECEE 473
R VLG QKGSL V R+ H M+ EE
Sbjct: 575 RQVLGTHVSQKGSLVNDKVLRFDFSHNEAMKPEE 608
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKLS-GDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + +AI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVDAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
G V L + + VD++++G EA ++LD++ FYAE GGQ+ D+G + + F
Sbjct: 468 GKVTALFVDGKAVDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKDANF 517
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD++++G EA ++LD++ FYAE GGQ+ D+G + N
Sbjct: 480 VDAINAGQEAVVVLDQTPFYAESGGQVGDKGELKDAN 516
>gi|327349463|gb|EGE78320.1| alanyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
Length = 1088
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 26/141 (18%)
Query: 322 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
NK+FVDS + G + GI+LD++NFYAEQGGQ D G +I ++ ++++ + V +
Sbjct: 622 NKKFVDSTKDIPEGEQFGIILDRTNFYAEQGGQENDTGKII-IDGKAELAV---EDVQVY 677
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G F+++ + V D + D RR PI +NHT TH
Sbjct: 678 GGYILHTGFMKYG-------------------SFNVNDSVIAEYDELRRWPIRNNHTGTH 718
Query: 439 ILNHALRFVLGPEADQKGSLV 459
ILN ALR VLG +QKGSLV
Sbjct: 719 ILNFALRQVLGEGVEQKGSLV 739
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSV 70
L G WRLYDT+GFPVDLTQLM EE+GL++D +E+A+ KA+ + Q V
Sbjct: 525 LHGADVWRLYDTFGFPVDLTQLMAEERGLTIDNAEFEEARLKAKEASKGQGKQTADV 581
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+NK+FVDS + G + GI+LD++NFYAEQGGQ D G +I
Sbjct: 621 HNKKFVDSTKDIPEGEQFGIILDRTNFYAEQGGQENDTGKII 662
>gi|421855|pir||S32671 alanine-tRNA ligase (EC 6.1.1.7) - Arabidopsis thaliana (fragment)
Length = 989
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 108/234 (46%), Gaps = 42/234 (17%)
Query: 247 GILLDKSNFYAEQGGQIYD-EGFMIGVNDEGTVVGLRYNKQF-------VDSVSSGTEAG 298
G LD + AE+ G + D +GF + + NKQ D+ S+ +AG
Sbjct: 457 GFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTLHKAG 516
Query: 299 ILLDKSNF----YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYD 354
+ +F + + ++ + + F++S ++ G++L ++FYAEQGGQI+D
Sbjct: 517 VSATDDSFKYIWFQDHESEL--KAIYTGSTFLESSAASDNVGLVLGSTSFYAEQGGQIFD 574
Query: 355 EGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHT--- 411
G +EGS F F++ N++ V + LS
Sbjct: 575 TGL-------------------IEGS------FGTFNVCNVQIFGGFVLHIGYLSKETGE 609
Query: 412 LRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
+ VGDK+ +D RR+ I NHT TH+LN+AL+ VLG DQKGS+V L
Sbjct: 610 VSVGDKVICKVDYERRKLIAPNHTCTHMLNYALKEVLGDHIDQKGSIVLPEKLR 663
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 4/60 (6%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQSEPESQAG 65
+ L GD A+ L+DTYGFP+DLTQLM EE+GL VD++ + E+A+++++S QAG
Sbjct: 440 QGNTLSGDDAFILWDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAG 499
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQS 113
++PE+ S EFCGGTH+ F + SEE IAKG V+ ++ F +
Sbjct: 736 ADPENNEWSLLSSEFCGGTHITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDA 791
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 236 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
F++S ++ G++L ++FYAEQGGQI+D G + G
Sbjct: 545 FLESSAASDNVGLVLGSTSFYAEQGGQIFDTGLIEG 580
>gi|429143628|gb|AFZ77082.1| alanyl-tRNA synthetase [Gilliamella apicola]
Length = 877
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 80/168 (47%), Gaps = 26/168 (15%)
Query: 300 LLDKSNFYAEQGGQIYDE--GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGF 357
L DK+ F Q + E N Q V++V++G EA I+LDK+ FY E GGQI D+G
Sbjct: 451 LDDKTEFLGYQATEASGEVIAIFQNGQKVENVNAGDEAIIILDKTPFYGESGGQIGDKGI 510
Query: 358 MIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDK 417
+ N E + L+ KY K + + + +L+VGD
Sbjct: 511 LTSANAEFTV---------LDSQKYG---------------KSIGHIGTLVKGSLKVGDL 546
Query: 418 LKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
+ ID R I NH+ATH+L AL+ +LG QKGSLV +L
Sbjct: 547 VTAAIDVELRERIRRNHSATHLLQAALQQILGNHVHQKGSLVNDSYLR 594
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 43/59 (72%), Gaps = 5/59 (8%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQ 57
Q + K+ +S VLPGDVA++LYDT+GFP+DLT + EK +++D + + E+ +K+A+
Sbjct: 379 QELVKITDS-VLPGDVAFKLYDTFGFPLDLTADVCREKNITIDEDGFNQCMEEQRKRAR 436
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 33/47 (70%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
N Q V++V++G EA I+LDK+ FY E GGQI D+G + N E TV+
Sbjct: 475 NGQKVENVNAGDEAIIILDKTPFYGESGGQIGDKGILTSANAEFTVL 521
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS--NKQF--VDSVSS 331
G V+ + N Q V++V++G EA I+LDK+ FY E GGQI D+G ++ N +F +DS
Sbjct: 467 GEVIAIFQNGQKVENVNAGDEAIIILDKTPFYGESGGQIGDKGILTSANAEFTVLDSQKY 526
Query: 332 GTEAG 336
G G
Sbjct: 527 GKSIG 531
>gi|423115809|ref|ZP_17103500.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5245]
gi|376379754|gb|EHS92504.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5245]
Length = 875
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V++V++G EA ++LD++ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VNAVNAGQEAVVILDQTPFYAESGGQVGDKG-------------------ELKGAGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F +S+ +K + + + L+ +L+VGD ++ +D ARR+ I NH+ATH+++ AL
Sbjct: 519 ----FQVSDTQKYGQAIGHIGKLNGGSLKVGDAVQADVDQARRQRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG 65
+G
Sbjct: 439 SSG 441
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V++V++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VNAVNAGQEAVVILDQTPFYAESGGQVGDKGELKGA 515
>gi|261203393|ref|XP_002628910.1| alanyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
gi|239586695|gb|EEQ69338.1| alanyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
Length = 962
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 26/141 (18%)
Query: 322 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
NK+FVDS + G + GI+LD++NFYAEQGGQ D G +I ++ ++++ + V +
Sbjct: 513 NKKFVDSTKDIPEGEQFGIILDRTNFYAEQGGQENDTGKII-IDGKAELAV---EDVQVY 568
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G F+++ + V D + D RR PI +NHT TH
Sbjct: 569 GGYILHTGFMKYG-------------------SFNVNDSVIAEYDELRRWPIRNNHTGTH 609
Query: 439 ILNHALRFVLGPEADQKGSLV 459
ILN ALR VLG +QKGSLV
Sbjct: 610 ILNFALRQVLGEGVEQKGSLV 630
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSV 70
L G WRLYDT+GFPVDLTQLM EE+GL++D +E+A+ KA+ + Q V
Sbjct: 416 LHGADVWRLYDTFGFPVDLTQLMAEERGLTIDNAEFEEARLKAKEASKGQGKQTADV 472
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+NK+FVDS + G + GI+LD++NFYAEQGGQ D G +I
Sbjct: 512 HNKKFVDSTKDIPEGEQFGIILDRTNFYAEQGGQENDTGKII 553
>gi|5734779|gb|AAD50044.1|AC007980_9 cytosolic tRNA-Ala synthetase [Arabidopsis thaliana]
gi|27311841|gb|AAO00886.1| Unknown protein [Arabidopsis thaliana]
gi|31711780|gb|AAP68246.1| At1g50200 [Arabidopsis thaliana]
Length = 955
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 108/234 (46%), Gaps = 42/234 (17%)
Query: 247 GILLDKSNFYAEQGGQIYD-EGFMIGVNDEGTVVGLRYNKQF-------VDSVSSGTEAG 298
G LD + AE+ G + D +GF + + NKQ D+ S+ +AG
Sbjct: 423 GFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTLHKAG 482
Query: 299 ILLDKSNF----YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYD 354
+ +F + + ++ + + F++S ++ G++L ++FYAEQGGQI+D
Sbjct: 483 VSATDDSFKYIWFQDHESEL--KAIYTGSTFLESSAASDNVGLVLGSTSFYAEQGGQIFD 540
Query: 355 EGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHT--- 411
G +EGS F F++ N++ V + LS
Sbjct: 541 TGL-------------------IEGS------FGTFNVCNVQIFGGFVLHIGYLSKETGE 575
Query: 412 LRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
+ VGDK+ +D RR+ I NHT TH+LN+AL+ VLG DQKGS+V L
Sbjct: 576 VSVGDKVICKVDYERRKLIAPNHTCTHMLNYALKEVLGDHIDQKGSIVLPEKLR 629
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 4/60 (6%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQSEPESQAG 65
+ L GD A+ L+DTYGFP+DLTQLM EE+GL VD++ + E+A+++++S QAG
Sbjct: 406 QGNTLSGDDAFILWDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAG 465
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQS 113
++PE+ S EFCGGTH+ F + SEE IAKG V+ ++ F +
Sbjct: 702 ADPENNEWSLLSSEFCGGTHITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDA 757
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 236 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
F++S ++ G++L ++FYAEQGGQI+D G + G
Sbjct: 511 FLESSAASDNVGLVLGSTSFYAEQGGQIFDTGLIEG 546
>gi|1673366|emb|CAA80381.1| cytosolic tRNA-Ala synthetase [Arabidopsis thaliana]
Length = 955
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 108/234 (46%), Gaps = 42/234 (17%)
Query: 247 GILLDKSNFYAEQGGQIYD-EGFMIGVNDEGTVVGLRYNKQF-------VDSVSSGTEAG 298
G LD + AE+ G + D +GF + + NKQ D+ S+ +AG
Sbjct: 423 GFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTLHKAG 482
Query: 299 ILLDKSNF----YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYD 354
+ +F + + ++ + + F++S ++ G++L ++FYAEQGGQI+D
Sbjct: 483 VSATDDSFKYIWFQDHESEL--KAIYTGSTFLESSAASDNVGLVLGSTSFYAEQGGQIFD 540
Query: 355 EGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHT--- 411
G +EGS F F++ N++ V + LS
Sbjct: 541 TGL-------------------IEGS------FGTFNVCNVQIFGGFVLHIGYLSKETGE 575
Query: 412 LRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
+ VGDK+ +D RR+ I NHT TH+LN+AL+ VLG DQKGS+V L
Sbjct: 576 VSVGDKVICKVDYERRKLIAPNHTCTHMLNYALKEVLGDHIDQKGSIVLPEKLR 629
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 43/60 (71%), Gaps = 4/60 (6%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQSEPESQAG 65
+ L GD A+ L+DTYGFP+DLTQLM EE+GL VD++ + E+A+++++S QAG
Sbjct: 406 QGNTLSGDDAFILWDTYGFPLDLTQLMAEERGLLVDVDGFNKAMEEARERSRSAQNKQAG 465
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQS 113
++PE+ S EFCGGTH+ F + SEE IAKG V+ ++ F +
Sbjct: 702 ADPENNEWSLLSSEFCGGTHITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDA 757
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 26/36 (72%)
Query: 236 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
F++S ++ G++L ++FYAEQGGQI+D G + G
Sbjct: 511 FLESSAASDNVGLVLGSTSFYAEQGGQIFDTGLIEG 546
>gi|239608271|gb|EEQ85258.1| alanyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
Length = 962
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 26/141 (18%)
Query: 322 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
NK+FVDS + G + GI+LD++NFYAEQGGQ D G +I ++ ++++ + V +
Sbjct: 513 NKKFVDSTKDIPEGEQFGIILDRTNFYAEQGGQENDTGKII-IDGKAELAV---EDVQVY 568
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G F+++ + V D + D RR PI +NHT TH
Sbjct: 569 GGYILHTGFMKYG-------------------SFNVNDSVIAEYDELRRWPIRNNHTGTH 609
Query: 439 ILNHALRFVLGPEADQKGSLV 459
ILN ALR VLG +QKGSLV
Sbjct: 610 ILNFALRQVLGEGVEQKGSLV 630
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 38/57 (66%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSV 70
L G WRLYDT+GFPVDLTQLM EE+GL++D +E+A+ KA+ + Q V
Sbjct: 416 LHGADVWRLYDTFGFPVDLTQLMAEERGLTIDNAEFEEARLKAKEASKGQGKQTADV 472
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 31/42 (73%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+NK+FVDS + G + GI+LD++NFYAEQGGQ D G +I
Sbjct: 512 HNKKFVDSTKDIPEGEQFGIILDRTNFYAEQGGQENDTGKII 553
>gi|283786756|ref|YP_003366621.1| alanyl-tRNA synthetase [Citrobacter rodentium ICC168]
gi|282950210|emb|CBG89846.1| alanyl-tRNA synthetase [Citrobacter rodentium ICC168]
Length = 875
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G +A ++LD++ FYAE GGQ+ D G L+G+ +
Sbjct: 480 VEAINAGQQAVVVLDQTPFYAESGGQVGDTG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + + TLS +L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVSDTQKYGQAIGHIGTLSAGSLKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 13/130 (10%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-TGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYEHLELNGKVTALFVDGKAVEAINAGQQAVVVLDQTPF 498
Query: 111 FQSHSGSIND 120
+ G + D
Sbjct: 499 YAESGGQVGD 508
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + V+++++G +A ++LD++ FYAE GGQ+ D G + F +VS +
Sbjct: 468 GKVTALFVDGKAVEAINAGQQAVVVLDQTPFYAESGGQVGDTGELKGAGFTFAVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
>gi|302506663|ref|XP_003015288.1| hypothetical protein ARB_06411 [Arthroderma benhamiae CBS 112371]
gi|291178860|gb|EFE34648.1| hypothetical protein ARB_06411 [Arthroderma benhamiae CBS 112371]
Length = 954
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 26/140 (18%)
Query: 323 KQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEG 379
K+ +DS + + + GI+LDK+NFYAEQGGQ YD G ++ ++ ++++++ V + G
Sbjct: 510 KEVIDSTKDIPANEQIGIILDKTNFYAEQGGQEYDTGKIV-IDGQAELDV---QNVQMYG 565
Query: 380 SKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHI 439
F+++ V D + D RR PI +NHT THI
Sbjct: 566 GYVLHTGFIKYG-------------------NFSVNDSVIAEYDELRRWPIRNNHTGTHI 606
Query: 440 LNHALRFVLGPEADQKGSLV 459
LN ALR VLG DQKGSLV
Sbjct: 607 LNFALREVLGDGIDQKGSLV 626
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
G K+ DV WRLYDT+GFPVDLT+LM EE+ L++D +E+A+ KA+ + QA
Sbjct: 409 GAGKLHGADV-WRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEARLKAKEASKGQA 463
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ K+ +DS + + + GI+LDK+NFYAEQGGQ YD G ++
Sbjct: 508 HGKEVIDSTKDIPANEQIGIILDKTNFYAEQGGQEYDTGKIV 549
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 276 GTVVGLRYNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+ + + K+ +DS + + + GI+LDK+NFYAEQGGQ YD G
Sbjct: 501 ANIKAICHGKEVIDSTKDIPANEQIGIILDKTNFYAEQGGQEYDTG 546
>gi|311278355|ref|YP_003940586.1| alanyl-tRNA synthetase [Enterobacter cloacae SCF1]
gi|308747550|gb|ADO47302.1| alanyl-tRNA synthetase [Enterobacter cloacae SCF1]
Length = 875
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 78/135 (57%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+S+++G +A ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VNSINAGQDAVVILDQTPFYAESGGQVGDKG-------------------ELKGAGFG-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++S+ +K + + L LS+ +L+VGD ++ +D RR I NH+ATH+++ AL
Sbjct: 519 ----FAVSDTQKYGQAIGHLGKLSNGSLKVGDAVQADVDEVRRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RDVLGTHVAQKGSLV 589
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 11/88 (12%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAM 80
+G ++ + EF G HL +
Sbjct: 439 SSGFGADYNAMIRVDGASEFKGYDHLEL 466
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + V+S+++G +A ++LD++ FYAE GGQ+ D+G + F +VS +
Sbjct: 468 GKVTALFVDGKAVNSINAGQDAVVILDQTPFYAESGGQVGDKGELKGAGFGFAVSDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+S+++G +A ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VNSINAGQDAVVILDQTPFYAESGGQVGDKGELKGA 515
>gi|414077955|ref|YP_006997273.1| alanyl-tRNA synthetase [Anabaena sp. 90]
gi|413971371|gb|AFW95460.1| alanyl-tRNA synthetase [Anabaena sp. 90]
Length = 880
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 68/133 (51%), Gaps = 24/133 (18%)
Query: 327 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPI 386
++ +GTE I+LDK+ FYAE GGQI D+G++ G LV +E K
Sbjct: 483 EAAEAGTEVQIVLDKTPFYAESGGQIGDKGYISG----------DGVLVRIEDVKKESDF 532
Query: 387 FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRF 446
F+ F + T+R+GD++ IDTA RR +NHTATH+L AL+
Sbjct: 533 FIHFG--------------YVERGTIRIGDEITAQIDTACRRRAQANHTATHLLQAALKK 578
Query: 447 VLGPEADQKGSLV 459
V+ Q GSLV
Sbjct: 579 VVDEGISQAGSLV 591
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 67/140 (47%), Gaps = 22/140 (15%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
++Q + + G + + G+ A+ LYDTYGFP++LTQ + EE ++VD++ + +A+ + Q E
Sbjct: 375 IIQEVKQKGLTSI-SGESAFTLYDTYGFPLELTQEVAEENNITVDVDGF-NAEMQKQVE- 431
Query: 61 ESQAGMET-----------------SVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNI 101
++A ET S +F G T L + ++ SEEA G+ +
Sbjct: 432 RAKAAHETIDLTVQGSLDKLAEHIHSTQFIGYTQLTTTAKIEVLLVAGVSEEAAEAGTEV 491
Query: 102 VSYCGSKGTFQSHSGSINDE 121
+ G I D+
Sbjct: 492 QIVLDKTPFYAESGGQIGDK 511
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 289 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
++ +GTE I+LDK+ FYAE GGQI D+G++S
Sbjct: 483 EAAEAGTEVQIVLDKTPFYAESGGQIGDKGYIS 515
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 238 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
++ +GTE I+LDK+ FYAE GGQI D+G++ G
Sbjct: 483 EAAEAGTEVQIVLDKTPFYAESGGQIGDKGYISG 516
>gi|420374716|ref|ZP_14874664.1| alanyl-tRNA synthetase [Shigella flexneri 1235-66]
gi|391315937|gb|EIQ73437.1| alanyl-tRNA synthetase [Shigella flexneri 1235-66]
Length = 875
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 85/154 (55%), Gaps = 28/154 (18%)
Query: 307 YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQ 366
Y E G++ + + VD +++G +A ++LD++ FYAE GGQ+ D+G
Sbjct: 463 YLELNGKVT--ALFVDGKAVDVINAGQDAVVVLDQTPFYAESGGQVGDKG---------- 510
Query: 367 IELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTA 425
L+G+ +A F++++ +K + + + LS +L+VGD ++ +D A
Sbjct: 511 ---------ELKGAGFA------FAVNDTQKYGQAIGHIGKLSAGSLKVGDAVQADVDEA 555
Query: 426 RRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
RR I NH+ATH+++ ALR VLG QKGSLV
Sbjct: 556 RRARIRLNHSATHLMHAALREVLGTHVAQKGSLV 589
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-SGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG 65
+G
Sbjct: 439 ASG 441
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 6/44 (13%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDE------GFMIGVND 274
VD +++G +A ++LD++ FYAE GGQ+ D+ GF VND
Sbjct: 480 VDVINAGQDAVVVLDQTPFYAESGGQVGDKGELKGAGFAFAVND 523
>gi|298491784|ref|YP_003721961.1| alanyl-tRNA synthetase ['Nostoc azollae' 0708]
gi|298233702|gb|ADI64838.1| alanyl-tRNA synthetase ['Nostoc azollae' 0708]
Length = 880
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 68/133 (51%), Gaps = 24/133 (18%)
Query: 327 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPI 386
++ +G E I+LD++ FYAE GGQI D+G++ G LV +E K
Sbjct: 483 ETAEAGREVQIVLDRTPFYAESGGQIGDKGYISG----------DGVLVRVEEVKKESDF 532
Query: 387 FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRF 446
F+ F H S TLR+GD +K I+TA RR +NHTATH+L AL+
Sbjct: 533 FVHFG--------------HIESGTLRIGDNVKAQINTAYRRRSQANHTATHLLQAALKK 578
Query: 447 VLGPEADQKGSLV 459
V+ Q GSLV
Sbjct: 579 VVDEGISQAGSLV 591
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMET 68
+ G A+ LYDTYGFP++LTQ + EE L+VD++ + +A+ + Q E ++A ET
Sbjct: 387 MSGKSAFTLYDTYGFPLELTQEVAEENNLTVDVDGF-NAEMQKQVE-RAKAAHET 439
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 25/33 (75%)
Query: 289 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
++ +G E I+LD++ FYAE GGQI D+G++S
Sbjct: 483 ETAEAGREVQIVLDRTPFYAESGGQIGDKGYIS 515
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 238 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
++ +G E I+LD++ FYAE GGQI D+G++ G
Sbjct: 483 ETAEAGREVQIVLDRTPFYAESGGQIGDKGYISG 516
>gi|320581101|gb|EFW95323.1| Cytoplasmic alanyl-tRNA synthetase [Ogataea parapolymorpha DL-1]
Length = 954
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/167 (36%), Positives = 83/167 (49%), Gaps = 34/167 (20%)
Query: 300 LLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAG----ILLDKSNFYAEQGGQIYDE 355
+ D S Y Q + G + K+ + S + GTEAG +LL+K+ FYAEQGGQ YD
Sbjct: 485 VTDDSYKYGNQDIKTKIVGIYNGKELLGS-TEGTEAGQQLGVLLEKTPFYAEQGGQEYDT 543
Query: 356 GFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHT---LSHTL 412
G ++ ++G +F + N++ V LHT +
Sbjct: 544 GKIV-----------------IDG-------VAEFEVENVQSYAGYV--LHTGHVVEGKF 577
Query: 413 RVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
VGD++ D RR PI +NHT THILN ALR +LG DQKGSLV
Sbjct: 578 SVGDQVIAGYDELRRWPIRNNHTGTHILNLALREILGDGVDQKGSLV 624
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/80 (46%), Positives = 46/80 (57%), Gaps = 6/80 (7%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
IA + L G WRLYDTYGFPVDLT+LM EE GL++D E +E K + S S+A
Sbjct: 400 IASKTPEQTLAGRDVWRLYDTYGFPVDLTRLMAEEAGLNIDEEGFE--KARLASLEASKA 457
Query: 65 GMETSVEFCGGTHLAMAHHV 84
G S G T L + H+
Sbjct: 458 GGSKS----GKTLLKLDVHI 473
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
++P+++ + SVEFCGGTH+A + + I E IAKG IV+ G++
Sbjct: 703 AKPDNKEWYDYSVEFCGGTHVAKTSDIKELVIVEESGIAKGIRRIVAVTGTEA 755
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 29/43 (67%), Gaps = 4/43 (9%)
Query: 232 YNKQFVDSVSSGTEAG----ILLDKSNFYAEQGGQIYDEGFMI 270
YN + + + GTEAG +LL+K+ FYAEQGGQ YD G ++
Sbjct: 505 YNGKELLGSTEGTEAGQQLGVLLEKTPFYAEQGGQEYDTGKIV 547
>gi|121719583|ref|XP_001276490.1| alanyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
gi|119404702|gb|EAW15064.1| alanyl-tRNA synthetase, putative [Aspergillus clavatus NRRL 1]
Length = 961
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 72/131 (54%), Gaps = 23/131 (17%)
Query: 329 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFL 388
+S+G + GI+LD++NFYAEQGGQ D G +I ++ ++++E+ S V L F+
Sbjct: 522 ISAGEQIGIILDRTNFYAEQGGQENDIGRII-IDGKAELEV---SDVQLYAGYVLHTGFM 577
Query: 389 QFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVL 448
++ + VGD + D RR PI +NHT THILN AL+ VL
Sbjct: 578 KYG-------------------SFSVGDTVLCEYDELRRWPIRNNHTGTHILNFALKRVL 618
Query: 449 GPEADQKGSLV 459
G +QKGSLV
Sbjct: 619 GDSVEQKGSLV 629
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 41/65 (63%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
AKL + L G WRLYDT+GFPVDLT+LM EE+GL +D +E+A+ KA+ + Q
Sbjct: 407 AKLKGNDKLHGADVWRLYDTFGFPVDLTRLMAEERGLKIDDTEFEEARLKAKEASKGQKK 466
Query: 66 METSV 70
T
Sbjct: 467 SATDT 471
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 25/31 (80%)
Query: 240 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+S+G + GI+LD++NFYAEQGGQ D G +I
Sbjct: 522 ISAGEQIGIILDRTNFYAEQGGQENDIGRII 552
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 23/28 (82%)
Query: 291 VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+S+G + GI+LD++NFYAEQGGQ D G
Sbjct: 522 ISAGEQIGIILDRTNFYAEQGGQENDIG 549
>gi|164660846|ref|XP_001731546.1| hypothetical protein MGL_1729 [Malassezia globosa CBS 7966]
gi|159105446|gb|EDP44332.1| hypothetical protein MGL_1729 [Malassezia globosa CBS 7966]
Length = 963
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 79/146 (54%), Gaps = 30/146 (20%)
Query: 319 FMSNKQFVDSVS---SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLV 375
F +K DS S +G GILLD++N YAE GGQ D G ++ ++ +++ E+
Sbjct: 512 FQEHKFVSDSNSLAKAGEPFGILLDQTNMYAESGGQQADTGSLV-IDGKAEFEV-----S 565
Query: 376 NLEGSK-YALPI-FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSN 433
+++ S Y L I FL++ L VGD++ + D +RRRP+ +N
Sbjct: 566 DVQASNGYVLHIGFLKYG-------------------KLSVGDQVVVSYDESRRRPLQNN 606
Query: 434 HTATHILNHALRFVLGPEADQKGSLV 459
HT THILN LR +LG DQKGSLV
Sbjct: 607 HTGTHILNFGLREILGDHVDQKGSLV 632
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 2/106 (1%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMET 68
G +K+ DV WRLYDTYGFPVDLT +M EE+GL+ D +E A+ +++ + Q +
Sbjct: 412 GRTKLSGADV-WRLYDTYGFPVDLTSIMAEEQGLTFDQAEFEKAQAESKEASKGQGKQQE 470
Query: 69 SVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQSH 114
++ H + H D + + K K FQ H
Sbjct: 471 ALAVKLDVH-DLGHLDADASVPQTNDVFKYDTPSMQAHVKAIFQEH 515
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 67 ETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+TS+EFCGGTH+ +G ++ E IAKG IV+ G +
Sbjct: 720 QTSIEFCGGTHVKKTGEIGRLVVTEESGIAKGIRRIVAVTGDEA 763
>gi|395786462|ref|ZP_10466189.1| alanyl-tRNA synthetase [Bartonella tamiae Th239]
gi|423716645|ref|ZP_17690835.1| alanyl-tRNA synthetase [Bartonella tamiae Th307]
gi|395422760|gb|EJF88956.1| alanyl-tRNA synthetase [Bartonella tamiae Th239]
gi|395428719|gb|EJF94794.1| alanyl-tRNA synthetase [Bartonella tamiae Th307]
Length = 888
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 74/143 (51%), Gaps = 27/143 (18%)
Query: 325 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYAL 384
VD++S G +A I+L+++ FY E GGQI D G ++G N
Sbjct: 478 IVDTLSEGQDAMIVLNQTPFYGESGGQIGDSGSILGEN---------------------- 515
Query: 385 PIFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+F + + +K+ V + H ++ + ++++LH+D RR I +NH+ATH+L+
Sbjct: 516 ---FEFIVKDTQKRADGVFVHIGHVEKGSVHINNEVELHVDHQRRHQIRANHSATHLLHE 572
Query: 443 ALRFVLGPEADQKGSLVYRYHLH 465
ALR VLG QKGSLV L
Sbjct: 573 ALREVLGNHVAQKGSLVSSQRLR 595
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
A L GDVA++LYDTYGFP+DLTQ + + +SVD E ++ A ++E +
Sbjct: 375 ANLDSGDQFDGDVAFKLYDTYGFPLDLTQDALRRRNISVDTEAFDKAMANQKAEARA 431
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 236 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
VD++S G +A I+L+++ FY E GGQI D G ++G N E
Sbjct: 478 IVDTLSEGQDAMIVLNQTPFYGESGGQIGDSGSILGENFE 517
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 273 NDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
N E V + + VD++S G +A I+L+++ FY E GGQI D G + + F
Sbjct: 464 NAEAIVTAIIRDGVIVDTLSEGQDAMIVLNQTPFYGESGGQIGDSGSILGENF 516
>gi|161615724|ref|YP_001589688.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|205830199|sp|A9N0C1.1|SYA_SALPB RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|161365088|gb|ABX68856.1| hypothetical protein SPAB_03515 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 876
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
FS+ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FSVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + V+++++G EA ++LD++ FYAE GGQ+ D+G + F SV +
Sbjct: 468 GKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAGFTFSVDDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|115490933|ref|XP_001210094.1| alanyl-tRNA synthetase [Aspergillus terreus NIH2624]
gi|114196954|gb|EAU38654.1| alanyl-tRNA synthetase [Aspergillus terreus NIH2624]
Length = 968
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 72/131 (54%), Gaps = 23/131 (17%)
Query: 329 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFL 388
+++G + GI+LD++NFYAEQGGQ D G ++ ++ ++++E+ V L G F+
Sbjct: 529 ITAGEQLGIILDRTNFYAEQGGQENDTGRIV-IDGQAELEV---GDVQLYGGYVLHTGFM 584
Query: 389 QFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVL 448
++ + VGD + D RR PI +NHT THILN ALR VL
Sbjct: 585 KYG-------------------SFSVGDSVICEYDELRRWPIRNNHTGTHILNFALREVL 625
Query: 449 GPEADQKGSLV 459
G +QKGSLV
Sbjct: 626 GDGIEQKGSLV 636
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQ 63
G+ K+ DV WRLYDT+GFPVDLT+LM EE+GL +D +E+A+ +A+ + Q
Sbjct: 418 GDDKLHGADV-WRLYDTFGFPVDLTRLMAEERGLRIDDLEFEEARLRAKEASKGQ 471
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 25/31 (80%)
Query: 240 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+++G + GI+LD++NFYAEQGGQ D G ++
Sbjct: 529 ITAGEQLGIILDRTNFYAEQGGQENDTGRIV 559
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 3/49 (6%)
Query: 273 NDEGTVVGLRYNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
N V + + K F S +++G + GI+LD++NFYAEQGGQ D G
Sbjct: 508 NITAQVKAIYHGKSFCTSTSEITAGEQLGIILDRTNFYAEQGGQENDTG 556
>gi|222527366|ref|YP_002571837.1| alanyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
gi|222451245|gb|ACM55511.1| alanyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
Length = 894
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 68/142 (47%), Gaps = 23/142 (16%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G + + + S +G I+LD + FYAE GGQI D G ++G QIE
Sbjct: 476 GMLGDGDALTSADTGRSVQIVLDTTPFYAESGGQIGDTGLLVGPEGSVQIE--------- 526
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
++ LP + V ++ + VGD+++ +D RR I NHTAT
Sbjct: 527 -DTRRPLPGLI-------------VHYGRVVNGRISVGDQVQATVDVVRRADIQRNHTAT 572
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H+L ALR VLG A Q GSLV
Sbjct: 573 HMLQRALRDVLGEHAAQAGSLV 594
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA 52
+++ + GE +V+PG+ A+ L DTYGFP+DLTQ + E+GL+VD YE A
Sbjct: 379 VIEQVRARGE-QVIPGNDAFVLKDTYGFPLDLTQKIAAEQGLTVDEAGYEAA 429
>gi|325090131|gb|EGC43441.1| alanyl-tRNA synthetase [Ajellomyces capsulatus H88]
Length = 961
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 26/141 (18%)
Query: 322 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
NK+FVDS + G + GI+LD++NFYAEQGGQ D G +I ++ ++++ + V +
Sbjct: 513 NKKFVDSTKDIPQGEQFGIILDRTNFYAEQGGQENDTGKII-IDGKAELAV---EDVQVY 568
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G F+++ + V D + D RR PI +NHT TH
Sbjct: 569 GGYILHTGFMKYG-------------------SFNVNDSVIAEYDELRRWPIRNNHTGTH 609
Query: 439 ILNHALRFVLGPEADQKGSLV 459
ILN ALR VLG +QKGSLV
Sbjct: 610 ILNFALRQVLGDGIEQKGSLV 630
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
AK S L G WRLYDT+GFPVDLT+LM EE+GL++D +E+A+ K++ + Q
Sbjct: 408 AKQKGSGKLHGADVWRLYDTFGFPVDLTRLMAEERGLTIDNAEFEEARLKSKEASKGQGK 467
Query: 66 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVS 103
V L + + D ++++A NI S
Sbjct: 468 RTADVVKLTVHDLGLLETMDDVPKTNDDAKFGRGNITS 505
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 31/42 (73%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
YNK+FVDS + G + GI+LD++NFYAEQGGQ D G +I
Sbjct: 512 YNKKFVDSTKDIPQGEQFGIILDRTNFYAEQGGQENDTGKII 553
>gi|225560127|gb|EEH08409.1| alanyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
Length = 1029
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 26/141 (18%)
Query: 322 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
NK+FVDS + G + GI+LD++NFYAEQGGQ D G +I ++ ++++ + V +
Sbjct: 581 NKKFVDSTKDIPQGEQFGIILDRTNFYAEQGGQENDTGKII-IDGKAELAV---EDVQVY 636
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G F+++ + V D + D RR PI +NHT TH
Sbjct: 637 GGYILHTGFMKYG-------------------SFNVNDSVIAEYDELRRWPIRNNHTGTH 677
Query: 439 ILNHALRFVLGPEADQKGSLV 459
ILN ALR VLG +QKGSLV
Sbjct: 678 ILNFALRQVLGDGIEQKGSLV 698
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 50/90 (55%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFC 73
L G WRLYDT+GFPVDLT+LM EE+GL++D +E+A+ KA+ + Q V
Sbjct: 484 LHGADVWRLYDTFGFPVDLTRLMAEERGLTIDNAEFEEARLKAKEASKGQGKRTADVVKL 543
Query: 74 GGTHLAMAHHVGDFCISSEEAIAKGSNIVS 103
L + + D ++++A NI S
Sbjct: 544 TVHDLGLLETMDDVPKTNDDAKFGRGNITS 573
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 31/42 (73%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
YNK+FVDS + G + GI+LD++NFYAEQGGQ D G +I
Sbjct: 580 YNKKFVDSTKDIPQGEQFGIILDRTNFYAEQGGQENDTGKII 621
>gi|401888987|gb|EJT52930.1| alanine-tRNA ligase [Trichosporon asahii var. asahii CBS 2479]
Length = 973
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 69/132 (52%), Gaps = 25/132 (18%)
Query: 329 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFL 388
V G GILLDK+NFYAE GGQ YD G +I ++ +++
Sbjct: 538 VPEGEPFGILLDKTNFYAESGGQEYDTG-VIAIDGQAE---------------------- 574
Query: 389 QFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFV 447
F + +++ V + L L++ D++ ID RR PI +NHT THILN ALR V
Sbjct: 575 -FKVEDVQVYNGYVLHVGRLEEGELKLNDEVICTIDELRRWPIRNNHTGTHILNFALRDV 633
Query: 448 LGPEADQKGSLV 459
LG DQKGSLV
Sbjct: 634 LGDGIDQKGSLV 645
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
K L G WRLYDTYGFPVDLTQ+M EE+GL +D E +E A+
Sbjct: 428 KTLAGRDTWRLYDTYGFPVDLTQIMAEERGLKIDEEAFEKAR 469
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 68 TSVEFCGGTHLAMAHHVGDFCISSEEAIAKG 98
TS+EFCGGTH+A + DF I E +IAKG
Sbjct: 734 TSIEFCGGTHVAKTDDIKDFVIVEESSIAKG 764
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 22/31 (70%)
Query: 291 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
V G GILLDK+NFYAE GGQ YD G ++
Sbjct: 538 VPEGEPFGILLDKTNFYAESGGQEYDTGVIA 568
Score = 41.6 bits (96), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 21/30 (70%)
Query: 240 VSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
V G GILLDK+NFYAE GGQ YD G +
Sbjct: 538 VPEGEPFGILLDKTNFYAESGGQEYDTGVI 567
>gi|387773156|ref|ZP_10128751.1| alanine--tRNA ligase [Haemophilus parahaemolyticus HK385]
gi|386905196|gb|EIJ69967.1| alanine--tRNA ligase [Haemophilus parahaemolyticus HK385]
Length = 832
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 26/143 (18%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G S + VD + SG A I+LDK+ FYAE GGQ+ D G + S+I
Sbjct: 429 GLFSQGKAVDVIQSGETAIIILDKTPFYAEMGGQVGDSGLI-----SSEI---------- 473
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTA 436
QF++++ +K ++ + S LR+GDK+ ++ RR I NH+A
Sbjct: 474 ----------CQFNVADTQKYGQVFGHYGQVESGELRIGDKVSAEVNATRRHSIELNHSA 523
Query: 437 THILNHALRFVLGPEADQKGSLV 459
TH+L+ ALR VLG QKGSLV
Sbjct: 524 THLLHSALREVLGEHVAQKGSLV 546
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 253 SNFYAEQGGQIYDEGF--MIG---VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFY 307
SNF A+ I +G +G V + TVVGL + VD + SG A I+LDK+ FY
Sbjct: 397 SNFGADYSNVIKIDGITEFVGYDHVTADATVVGLFSQGKAVDVIQSGETAIIILDKTPFY 456
Query: 308 AEQGGQIYDEGFMSNK 323
AE GGQ+ D G +S++
Sbjct: 457 AEMGGQVGDSGLISSE 472
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
E K L G VA++LYDTYGFP+DLT + E+ + +D E DA+ AQ E
Sbjct: 343 EDKTLSGKVAFKLYDTYGFPLDLTADVCRERDILID-EAGFDAEMTAQRE 391
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 230 FSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
FS K VD + SG A I+LDK+ FYAE GGQ+ D G +
Sbjct: 431 FSQGKA-VDVIQSGETAIIILDKTPFYAEMGGQVGDSGLI 469
>gi|163849369|ref|YP_001637413.1| alanyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
gi|205830020|sp|A9WCR2.1|SYA_CHLAA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|163670658|gb|ABY37024.1| alanyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
Length = 894
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 68/142 (47%), Gaps = 23/142 (16%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G + + + S +G I+LD + FYAE GGQI D G ++G QIE
Sbjct: 476 GMLGDGDALTSADTGRSVQIVLDTTPFYAESGGQIGDTGLLVGPEGSVQIE--------- 526
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
++ LP + V ++ + VGD+++ +D RR I NHTAT
Sbjct: 527 -DTRRPLPGLI-------------VHYGRVVNGRISVGDQVQATVDVVRRADIQRNHTAT 572
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H+L ALR VLG A Q GSLV
Sbjct: 573 HMLQRALRDVLGEHAAQAGSLV 594
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA 52
+++ + GE +V+PG+ A+ L DTYGFP+DLTQ + E+GL+VD YE A
Sbjct: 379 VIEQVRARGE-QVIPGNDAFVLKDTYGFPLDLTQKIAAEQGLTVDEAGYEAA 429
>gi|417360242|ref|ZP_12134400.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
gi|353587127|gb|EHC46521.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
Length = 885
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 39/219 (17%)
Query: 245 EAGILLDKSNFYAEQGGQIYDE--GFMIGVNDEGTVVGLRYNKQF-VDSVSSGTEAGILL 301
E I +D++ F A Q E GF E + G YN VDS S
Sbjct: 415 ERNIKVDEAGFEAAMEEQRRREASGFGADCAREASGFGADYNAMIRVDSASEF------- 467
Query: 302 DKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 361
K + E G++ + + V+++++G EA ++LD++ FYAE GGQ+ D+G
Sbjct: 468 -KGYDHLELNGKVT--ALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKG----- 519
Query: 362 NDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKL 420
L+G+ + F++ + +K + + L LS L+VGD ++
Sbjct: 520 --------------ELKGAGFT------FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQA 559
Query: 421 HIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+D ARR I NH+ATH+++ ALR VLG QKGSLV
Sbjct: 560 DVDEARRARIRLNHSATHLMHAALRQVLGTHVAQKGSLV 598
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + S
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRREAS 438
Query: 63 QAGMETSVEFCG 74
G + + E G
Sbjct: 439 GFGADCAREASG 450
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 489 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 524
>gi|240278873|gb|EER42379.1| alanyl-tRNA synthetase [Ajellomyces capsulatus H143]
Length = 961
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/141 (37%), Positives = 75/141 (53%), Gaps = 26/141 (18%)
Query: 322 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
NK+FVDS + G + GI+LD++NFYAEQGGQ D G +I ++ ++++ + V +
Sbjct: 513 NKKFVDSTKDIPQGEQFGIILDRTNFYAEQGGQENDTGKII-IDGKAELAV---EDVQVY 568
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G F+++ + V D + D RR PI +NHT TH
Sbjct: 569 GGYILHTGFMKYG-------------------SFNVNDSVIAEYDELRRWPIRNNHTGTH 609
Query: 439 ILNHALRFVLGPEADQKGSLV 459
ILN ALR VLG +QKGSLV
Sbjct: 610 ILNFALRQVLGDGIEQKGSLV 630
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 53/98 (54%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
AK S L G WRLYDT+GFPVDLT+LM EE+GL++D +E+A+ K++ + Q
Sbjct: 408 AKQKGSGKLHGADVWRLYDTFGFPVDLTRLMAEERGLTIDNAEFEEARLKSKEASKGQGK 467
Query: 66 METSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVS 103
V L + + D ++++A NI S
Sbjct: 468 RTADVVKLTVHDLGLLETMDDVPKTNDDAKFGRGNITS 505
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 31/42 (73%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
YNK+FVDS + G + GI+LD++NFYAEQGGQ D G +I
Sbjct: 512 YNKKFVDSTKDIPQGEQFGIILDRTNFYAEQGGQENDTGKII 553
>gi|299751839|ref|XP_001830532.2| tRNA synthetase class II [Coprinopsis cinerea okayama7#130]
gi|298409558|gb|EAU91282.2| tRNA synthetase class II [Coprinopsis cinerea okayama7#130]
Length = 968
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 78/156 (50%), Gaps = 28/156 (17%)
Query: 305 NFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 364
N A +YD+ F+++ Q + G++LDK++FYAE GGQ YD G ++
Sbjct: 514 NITATVKAIVYDKKFLTSTQ---DIPEDATFGVILDKTSFYAESGGQEYDTGNIV----- 565
Query: 365 SQIELWFSSLVNLEGSKYALPIFLQFSLSNLK-KKKKLVKLLHTLSHTLRVGDKLKLHID 423
++G+ F ++N++ +V H L VG ++ D
Sbjct: 566 ------------IDGA-------ADFEVTNVQVYNGYVVHTGHLKYGQLDVGSEVISSYD 606
Query: 424 TARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
RR P+ +NHTATHILN ALR VLG DQKGSLV
Sbjct: 607 ELRRWPLRNNHTATHILNFALREVLGDHVDQKGSLV 642
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
AK K L G WRLYDTYGFPVDLT+LM EE GL ++ +E+A++K++ + A
Sbjct: 419 AKAEGRKELSGADVWRLYDTYGFPVDLTRLMAEELGLGINDAEFEEAQRKSKEASKGTAK 478
Query: 66 METS 69
+T+
Sbjct: 479 KDTA 482
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 61 ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGSIN 119
E+ +TS+EFCGGTH+A + F I+ E IAKG I++ G + +
Sbjct: 724 ENPKWRQTSIEFCGGTHVAKTGDIKGFVITEESGIAKGIRRIIAVTGHEAAEVTRVAQAL 783
Query: 120 DEMVNKYPSL 129
+E +N+ +L
Sbjct: 784 EEKLNQADAL 793
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDSVSSGTEA---GILLDKSNFYAEQGGQIYDEGFMI 270
Y+K+F+ S E G++LDK++FYAE GGQ YD G ++
Sbjct: 524 YDKKFLTSTQDIPEDATFGVILDKTSFYAESGGQEYDTGNIV 565
>gi|406695477|gb|EKC98782.1| alanine-tRNA ligase [Trichosporon asahii var. asahii CBS 8904]
Length = 1096
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 69/132 (52%), Gaps = 25/132 (18%)
Query: 329 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFL 388
V G GILLDK+NFYAE GGQ YD G +I ++ +++
Sbjct: 661 VPEGEPFGILLDKTNFYAESGGQEYDTG-VIAIDGQAE---------------------- 697
Query: 389 QFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFV 447
F + +++ V + L L++ D++ ID RR PI +NHT THILN ALR V
Sbjct: 698 -FKVEDVQVYNGYVLHVGRLEEGELKLNDEVICTIDELRRWPIRNNHTGTHILNFALRDV 756
Query: 448 LGPEADQKGSLV 459
LG DQKGSLV
Sbjct: 757 LGDGIDQKGSLV 768
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 32/42 (76%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
K L G WRLYDTYGFPVDLTQ+M EE+GL +D E +E A+
Sbjct: 551 KTLAGRDTWRLYDTYGFPVDLTQIMAEERGLKIDEEAFEKAR 592
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 68 TSVEFCGGTHLAMAHHVGDFCISSEEAIAKG 98
TS+EFCGGTH+A + DF I E +IAKG
Sbjct: 857 TSIEFCGGTHVAKTDDIKDFVIVEESSIAKG 887
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 22/31 (70%)
Query: 291 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
V G GILLDK+NFYAE GGQ YD G ++
Sbjct: 661 VPEGEPFGILLDKTNFYAESGGQEYDTGVIA 691
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 21/30 (70%)
Query: 240 VSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
V G GILLDK+NFYAE GGQ YD G +
Sbjct: 661 VPEGEPFGILLDKTNFYAESGGQEYDTGVI 690
>gi|414083449|ref|YP_006992157.1| alanyl-tRNA synthetase [Carnobacterium maltaromaticum LMA28]
gi|412997033|emb|CCO10842.1| alanyl-tRNA synthetase [Carnobacterium maltaromaticum LMA28]
Length = 881
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 22/149 (14%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
E ++ VDSV +G+EA ++ +++ FYAE GGQ+ D G + + E+ + + +
Sbjct: 473 ELIVAEDALVDSVKTGSEAQLIFNQTPFYAEMGGQVADTGVIKNKDGET-----VAKVTS 527
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
++ + P+ L+ LK +G++ +L +D RR I NHTA
Sbjct: 528 VKKAPSGQPLHFVDVLAELK-----------------LGEEYELVVDQVARRKITRNHTA 570
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ AL+ +LG A+Q GSLV ++L
Sbjct: 571 THLLHRALKDILGDHANQAGSLVAPHYLR 599
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 15/88 (17%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD-------MEVYEDAK 53
+++ + + G+ ++ D+ ++LYDTYGFPV+LT+ E++GL VD ME+ +
Sbjct: 376 LVKELKEAGKEEIEGKDI-FKLYDTYGFPVELTEEYAEDEGLKVDHAGFEAEMEMQRNRA 434
Query: 54 KKAQSEPESQ-------AGMETSVEFCG 74
+ A+S+ +S A ++ EF G
Sbjct: 435 RSARSDEKSMNVQTGLLADIKIDSEFIG 462
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 236 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
VDSV +G+EA ++ +++ FYAE GGQ+ D G +
Sbjct: 481 LVDSVKTGSEAQLIFNQTPFYAEMGGQVADTGVI 514
>gi|392529655|ref|ZP_10276792.1| alanyl-tRNA synthetase [Carnobacterium maltaromaticum ATCC 35586]
Length = 881
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 79/149 (53%), Gaps = 22/149 (14%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
E ++ VDSV +G+EA ++ +++ FYAE GGQ+ D G + + E+ + + +
Sbjct: 473 ELIVAEDALVDSVKTGSEAQLIFNQTPFYAEMGGQVADTGVIKNKDGET-----VAKVTS 527
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
++ + P+ L+ LK +G++ +L +D RR I NHTA
Sbjct: 528 VKKAPSGQPLHFVDVLAELK-----------------LGEEYELVVDQVARRKITRNHTA 570
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ AL+ +LG A+Q GSLV ++L
Sbjct: 571 THLLHRALKDILGDHANQAGSLVAPHYLR 599
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 51/88 (57%), Gaps = 15/88 (17%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD-------MEVYEDAK 53
+++ + + G+ ++ D+ ++LYDTYGFPV+LT+ E++GL VD ME+ +
Sbjct: 376 LVKELKEAGKEEIEGKDI-FKLYDTYGFPVELTEEYAEDEGLKVDHAGFEAEMEMQRNRA 434
Query: 54 KKAQSEPES---QAGMETSV----EFCG 74
+ A+S+ +S Q G+ V EF G
Sbjct: 435 RSARSDEKSMNVQTGLLADVKIDSEFIG 462
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 25/34 (73%)
Query: 236 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
VDSV +G+EA ++ +++ FYAE GGQ+ D G +
Sbjct: 481 LVDSVKTGSEAQLIFNQTPFYAEMGGQVADTGVI 514
>gi|358059531|dbj|GAA94688.1| hypothetical protein E5Q_01341 [Mixia osmundae IAM 14324]
Length = 1005
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/142 (38%), Positives = 75/142 (52%), Gaps = 28/142 (19%)
Query: 322 NKQFVDSVSS---GTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
++ FVD+ SS G GILLD++ YAE GGQ D G ++ +
Sbjct: 560 DRSFVDNTSSIEQGKPFGILLDRTCLYAESGGQENDTGTIV-----------------IA 602
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTAT 437
G +F + +++ K V + TL+ +L VGD + + +D RR PI +NHT T
Sbjct: 603 GKA-------EFLVQDVQAYKGYVLHVGTLTEGSLSVGDAVVISLDELRRWPIKNNHTGT 655
Query: 438 HILNHALRFVLGPEADQKGSLV 459
HILN ALR VLG +QKGSLV
Sbjct: 656 HILNFALREVLGDHVEQKGSLV 677
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%), Gaps = 4/65 (6%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
QT AK G++++ DV WRLY+TYGFPVDLT LM EE+GLS + + ++ A +A S S
Sbjct: 453 QTRAK-GKTELSGKDV-WRLYETYGFPVDLTLLMAEEQGLSYNQKEFDAA--QAHSIEVS 508
Query: 63 QAGME 67
+AG++
Sbjct: 509 KAGIK 513
>gi|152979781|ref|YP_001352273.1| alanyl-tRNA synthetase [Janthinobacterium sp. Marseille]
gi|205830071|sp|A6SVH6.1|SYA_JANMA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|151279858|gb|ABR88268.1| alanyl-tRNA synthetase [Janthinobacterium sp. Marseille]
Length = 869
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 70/136 (51%), Gaps = 27/136 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V S+ G ++LD + FY+E GGQ+ D+GF ++ EG
Sbjct: 474 VPSLKEGQAGIVVLDTTPFYSESGGQVGDQGF-----------------ISAEG------ 510
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH--TLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+QF + + +K K V H + TL VGDK+K +D ARR M NH+ THI++ A
Sbjct: 511 --VQFGVEDTQKIKADVYGHHGVQTQGTLTVGDKVKAAVDGARRAATMRNHSVTHIMHKA 568
Query: 444 LRFVLGPEADQKGSLV 459
LR VLG QKGSLV
Sbjct: 569 LREVLGDHVQQKGSLV 584
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA--KKKAQSEPESQAGM 66
G++KVLPG+VA++L+DT+GFP+DL+ + E+GLSVD + A K+KA + M
Sbjct: 380 GDAKVLPGEVAFKLHDTFGFPLDLSADVCRERGLSVDEAGFAAAMEKQKAAGRAAGKFKM 439
Query: 67 ETSVEFCG 74
E +VE+ G
Sbjct: 440 ERAVEYTG 447
>gi|315046056|ref|XP_003172403.1| alanyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
gi|311342789|gb|EFR01992.1| alanyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
Length = 970
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 74/140 (52%), Gaps = 26/140 (18%)
Query: 323 KQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEG 379
K+ +DS + + + GI+LDK+NFYAEQGGQ YD G ++ ++ ++++++ V + G
Sbjct: 519 KEVIDSTKDIPADEQIGIILDKTNFYAEQGGQEYDTGKIV-IDGQAELDV---QNVQMYG 574
Query: 380 SKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHI 439
F+++ V D + D RR PI +NHT THI
Sbjct: 575 GYVLHTGFIKYG-------------------NFSVNDSVIAEYDELRRWPIRNNHTGTHI 615
Query: 440 LNHALRFVLGPEADQKGSLV 459
LN ALR VLG DQKGSLV
Sbjct: 616 LNFALREVLGDGIDQKGSLV 635
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 59/118 (50%), Gaps = 4/118 (3%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMET 68
G K+ DV WRLYDT+GFPVDLT+LM EE+ L++D +E+A+ KA+ + QA +
Sbjct: 418 GAGKLHGADV-WRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEARLKAKEASKGQAKAAS 476
Query: 69 SVEFCGGTHLAMAHHVGDFCISSEEAIAKG---SNIVSYCGSKGTFQSHSGSINDEMV 123
+ L+ G + + KG +NI + C K S DE +
Sbjct: 477 DLLKLTVHTLSTLEKNGVPKTNDDAKFGKGNIVANIKAICHGKEVIDSTKDIPADEQI 534
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ K+ +DS + + + GI+LDK+NFYAEQGGQ YD G ++
Sbjct: 517 HGKEVIDSTKDIPADEQIGIILDKTNFYAEQGGQEYDTGKIV 558
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 276 GTVVGLRYNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+ + + K+ +DS + + + GI+LDK+NFYAEQGGQ YD G
Sbjct: 510 ANIKAICHGKEVIDSTKDIPADEQIGIILDKTNFYAEQGGQEYDTG 555
>gi|205830055|sp|Q0VNK2.2|SYA_ALCBS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 863
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 82/156 (52%), Gaps = 32/156 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G E ++LD++ FYAE GGQ+ D G +I DE++
Sbjct: 468 VDTLNAGEEGMVVLDRTPFYAESGGQVGDTGALIA--DEAR------------------- 506
Query: 386 IFLQFSLSNLKKKKKL-VKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F +++ +K++ V + +S +L +G K+ +D RR +M NH+ATH+++ AL
Sbjct: 507 ----FMVTDTRKRQAAHVHVGKQVSGSLTIGGKVSACVDVDRRLAVMRNHSATHLMHAAL 562
Query: 445 RFVLGPEADQKGSLVYRYHLH------ENIMECEEE 474
R VLG QKGSLV +L E + E + E
Sbjct: 563 RNVLGEHVQQKGSLVSADYLRFDFSHGEAVSEAQRE 598
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+ +VLPGDV + LYDT+GFP DLT + E+ LSVDM+ +E A AQ E AG
Sbjct: 374 DGRVLPGDVLFNLYDTHGFPPDLTADVARERDLSVDMDGFE-AAMAAQRERARGAG 428
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 274 DEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
D+ TVV L + VD++++G E ++LD++ FYAE GGQ+ D G +
Sbjct: 454 DDNTVVALYKDGAAVDTLNAGEEGMVVLDRTPFYAESGGQVGDTGAL 500
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
VD++++G E ++LD++ FYAE GGQ+ D G +I
Sbjct: 468 VDTLNAGEEGMVVLDRTPFYAESGGQVGDTGALI 501
>gi|205830246|sp|A8GA09.2|SYA_SERP5 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 875
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 26/143 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q V+ + +G EA ++LD++ FY E GGQ+ D+G + N +
Sbjct: 478 QPVNEIHAGEEAVVVLDETPFYGESGGQVGDKGVLKAANAD------------------- 518
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +S+ +K + + LSH +L+V D++ IDT RR I NH+ATH+L+
Sbjct: 519 ------FEVSDTQKYGQAIGHQGKLSHGSLKVNDRVDAKIDTVRRNRIRLNHSATHLLHA 572
Query: 443 ALRFVLGPEADQKGSLVYRYHLH 465
ALR LG QKGSLV +L
Sbjct: 573 ALRQTLGEHVAQKGSLVNDKYLR 595
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+ L G+ A+RLYDTYGFPVDLT + E+GL VD +E A + + +G
Sbjct: 386 QGDTLDGETAFRLYDTYGFPVDLTADVCRERGLKVDEAGFEQAMEAQRRRARESSG 441
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
+ TV L + Q V+ + +G EA ++LD++ FY E GGQ+ D+G +
Sbjct: 467 QSTVTALFRDGQPVNEIHAGEEAVVVLDETPFYGESGGQVGDKGVL 512
>gi|110834659|ref|YP_693518.1| alanyl-tRNA synthetase [Alcanivorax borkumensis SK2]
gi|110647770|emb|CAL17246.1| (alanyl-tRNA synthetase) [Alcanivorax borkumensis SK2]
Length = 900
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 26/141 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G E ++LD++ FYAE GGQ+ D G +I DE++
Sbjct: 505 VDTLNAGEEGMVVLDRTPFYAESGGQVGDTGALIA--DEAR------------------- 543
Query: 386 IFLQFSLSNLKKKKKL-VKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F +++ +K++ V + +S +L +G K+ +D RR +M NH+ATH+++ AL
Sbjct: 544 ----FMVTDTRKRQAAHVHVGKQVSGSLTIGGKVSACVDVDRRLAVMRNHSATHLMHAAL 599
Query: 445 RFVLGPEADQKGSLVYRYHLH 465
R VLG QKGSLV +L
Sbjct: 600 RNVLGEHVQQKGSLVSADYLR 620
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+ +VLPGDV + LYDT+GFP DLT + E+ LSVDM+ +E A AQ E AG
Sbjct: 411 DGRVLPGDVLFNLYDTHGFPPDLTADVARERDLSVDMDGFE-AAMAAQRERARGAG 465
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 32/47 (68%)
Query: 274 DEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
D+ TVV L + VD++++G E ++LD++ FYAE GGQ+ D G +
Sbjct: 491 DDNTVVALYKDGAAVDTLNAGEEGMVVLDRTPFYAESGGQVGDTGAL 537
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VD++++G E ++LD++ FYAE GGQ+ D G +I
Sbjct: 505 VDTLNAGEEGMVVLDRTPFYAESGGQVGDTGALIA 539
>gi|255028973|ref|ZP_05300924.1| alanyl-tRNA synthetase [Listeria monocytogenes LO28]
Length = 520
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ N VD V++G EA ++ ++ FYAE GGQ+ D+G + ES+ L + V
Sbjct: 115 LIQNDTLVDEVAAGNEAQVIFKETPFYAESGGQVADKGTI-----ESETGLAYVEDVQKA 169
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+K NL + + L+ GD +KL +D +RR + NHTATH
Sbjct: 170 PNK-----------QNLHR-------ISVKEGVLKTGDTVKLAVDKVKRRETIKNHTATH 211
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 212 LLHRALKDTLGEHVNQAGSLV 232
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 34/53 (64%), Gaps = 3/53 (5%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
+L+TI AK +V+ G ++LYDT+GFPV+LT+ E+ GL VD +E
Sbjct: 12 ILETILKTAKETNEQVIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFE 64
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 200 LVSSCGFIGSDTGLGDLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQ 259
L F+G ++ T+H + L N VD V++G EA ++ ++ FYAE
Sbjct: 94 LTEKSAFVGYNS-------TEHVSEI--LYLIQNDTLVDEVAAGNEAQVIFKETPFYAES 144
Query: 260 GGQIYDEGFM 269
GGQ+ D+G +
Sbjct: 145 GGQVADKGTI 154
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 281 LRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
L N VD V++G EA ++ ++ FYAE GGQ+ D+G + ++
Sbjct: 115 LIQNDTLVDEVAAGNEAQVIFKETPFYAESGGQVADKGTIESE 157
>gi|157369088|ref|YP_001477077.1| alanyl-tRNA synthetase [Serratia proteamaculans 568]
gi|157320852|gb|ABV39949.1| alanyl-tRNA synthetase [Serratia proteamaculans 568]
Length = 892
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 26/143 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q V+ + +G EA ++LD++ FY E GGQ+ D+G + N +
Sbjct: 495 QPVNEIHAGEEAVVVLDETPFYGESGGQVGDKGVLKAANAD------------------- 535
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +S+ +K + + LSH +L+V D++ IDT RR I NH+ATH+L+
Sbjct: 536 ------FEVSDTQKYGQAIGHQGKLSHGSLKVNDRVDAKIDTVRRNRIRLNHSATHLLHA 589
Query: 443 ALRFVLGPEADQKGSLVYRYHLH 465
ALR LG QKGSLV +L
Sbjct: 590 ALRQTLGEHVAQKGSLVNDKYLR 612
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+ L G+ A+RLYDTYGFPVDLT + E+GL VD +E A + + +G
Sbjct: 403 QGDTLDGETAFRLYDTYGFPVDLTADVCRERGLKVDEAGFEQAMEAQRRRARESSG 458
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
+ TV L + Q V+ + +G EA ++LD++ FY E GGQ+ D+G +
Sbjct: 484 QSTVTALFRDGQPVNEIHAGEEAVVVLDETPFYGESGGQVGDKGVL 529
>gi|417477266|ref|ZP_12171502.1| Alanyl-tRNA synthetase, partial [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
gi|353637929|gb|EHC83621.1| Alanyl-tRNA synthetase, partial [Salmonella enterica subsp.
enterica serovar Rubislaw str. A4-653]
Length = 281
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 46 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 84
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 85 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 140
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 141 RQVLGTHVAQKGSLV 155
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 46 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 81
>gi|213420684|ref|ZP_03353750.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 262
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 139 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAG----------------------- 175
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 176 --FTFAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 233
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 234 RQVLGTHVAQKGSLV 248
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 39 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 97
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 98 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 157
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 158 YAESGGQVGDK 168
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 139 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 174
>gi|452123349|ref|YP_007473597.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|451912353|gb|AGF84159.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 876
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDRTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDRTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDRTPFYAESGGQVGDKGELKGA 515
>gi|240949596|ref|ZP_04753931.1| alanyl-tRNA synthetase [Actinobacillus minor NM305]
gi|240295854|gb|EER46530.1| alanyl-tRNA synthetase [Actinobacillus minor NM305]
Length = 874
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 26/143 (18%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G SN VD + SG A I+LD++ FYAE GGQ+ D G ++
Sbjct: 471 GLFSNGNAVDVIKSGENAIIILDQTPFYAEMGGQVGDSG-----------------RIST 513
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTA 436
E F QF++++ +K ++ + L + L+VGDK+ + RR I NH+A
Sbjct: 514 E--------FCQFNVADTQKYGQVFGHIGQLEAGELKVGDKVTAEVAAERRHSIQLNHSA 565
Query: 437 THILNHALRFVLGPEADQKGSLV 459
TH+L+ ALR VLG QKGSLV
Sbjct: 566 THLLHSALRKVLGSHVMQKGSLV 588
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
E+K L GDVA++LYDTYGFP+DLT + E+ +++D +E A+ +AQ E
Sbjct: 385 ENKTLSGDVAFKLYDTYGFPLDLTADVCRERNIAIDEAGFE-AEMQAQRE 433
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
E TVVGL N VD + SG A I+LD++ FYAE GGQ+ D G +S +
Sbjct: 466 EATVVGLFSNGNAVDVIKSGENAIIILDQTPFYAEMGGQVGDSGRISTE 514
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 267
N VD + SG A I+LD++ FYAE GGQ+ D G
Sbjct: 475 NGNAVDVIKSGENAIIILDQTPFYAEMGGQVGDSG 509
>gi|204928130|ref|ZP_03219330.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
gi|204322452|gb|EDZ07649.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Javiana str. GA_MM04042433]
Length = 876
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDRTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDRTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDRTPFYAESGGQVGDKGELKGA 515
>gi|302666339|ref|XP_003024770.1| hypothetical protein TRV_01052 [Trichophyton verrucosum HKI 0517]
gi|291188840|gb|EFE44159.1| hypothetical protein TRV_01052 [Trichophyton verrucosum HKI 0517]
Length = 925
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 73/140 (52%), Gaps = 26/140 (18%)
Query: 323 KQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEG 379
K +DS + + + GI+LDK+NFYAEQGGQ YD G ++ ++ ++++++ V + G
Sbjct: 481 KDVIDSTKDIPANEQIGIILDKTNFYAEQGGQEYDTGKIV-IDGQAELDV---QNVQMYG 536
Query: 380 SKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHI 439
F+++ V D + D RR PI +NHT THI
Sbjct: 537 GYVLHTGFIKYG-------------------NFSVNDSVIAEYDELRRWPIRNNHTGTHI 577
Query: 440 LNHALRFVLGPEADQKGSLV 459
LN ALR VLG DQKGSLV
Sbjct: 578 LNFALREVLGDGIDQKGSLV 597
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
LPG WRLYDT+GFPVDLT+LM EE+ L++D +E+A+ KA+ + QA
Sbjct: 384 LPGADVWRLYDTFGFPVDLTRLMAEERQLTIDDAEFEEARLKAKEASKGQA 434
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 3/42 (7%)
Query: 232 YNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ K +DS + + + GI+LDK+NFYAEQGGQ YD G ++
Sbjct: 479 HGKDVIDSTKDIPANEQIGIILDKTNFYAEQGGQEYDTGKIV 520
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%), Gaps = 3/46 (6%)
Query: 276 GTVVGLRYNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+ + + K +DS + + + GI+LDK+NFYAEQGGQ YD G
Sbjct: 472 ANIKAICHGKDVIDSTKDIPANEQIGIILDKTNFYAEQGGQEYDTG 517
>gi|242092594|ref|XP_002436787.1| hypothetical protein SORBIDRAFT_10g008780 [Sorghum bicolor]
gi|313471753|sp|C5Z7K4.1|SYAP_SORBI RecName: Full=Probable alanine--tRNA ligase, chloroplastic;
AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS;
Flags: Precursor
gi|241915010|gb|EER88154.1| hypothetical protein SORBIDRAFT_10g008780 [Sorghum bicolor]
Length = 961
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 84/163 (51%), Gaps = 26/163 (15%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI--GVNDESQIELWFSSLV 375
G + N V+ VS G+E ILLD++ FYAE GGQ+ D GF+ G D SQ ++++
Sbjct: 541 GLLVNGNPVNEVSEGSEVEILLDRTPFYAESGGQVGDNGFLYVNGGEDRSQ-----AAVI 595
Query: 376 NLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHT 435
+ +Q SL N+ K +K ++ VG ++ +D R+ ++HT
Sbjct: 596 EIND--------VQKSLGNIFVHKGTIK-----QGSVEVGKEVDACVDAKLRQGAKAHHT 642
Query: 436 ATHILNHALRFVLGPEADQKGSLV------YRYHLHENIMECE 472
ATH+L AL+ V+G E Q GSLV + ++ H + E E
Sbjct: 643 ATHLLQSALKSVVGSETSQAGSLVAFDRLRFDFNFHRPVSEGE 685
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N V+ VS G+E ILLD++ FYAE GGQ+ D GF+
Sbjct: 545 NGNPVNEVSEGSEVEILLDRTPFYAESGGQVGDNGFL 581
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 36/54 (66%), Gaps = 4/54 (7%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQS 58
G+ L G + LYDTYGFPV++T + E+G++VD+E + E+ +K++Q+
Sbjct: 450 GDKPSLSGKDLFLLYDTYGFPVEITAEIASERGVTVDIEGFDIEMENQRKQSQA 503
>gi|319790646|ref|YP_004152279.1| alanyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
gi|317115148|gb|ADU97638.1| alanyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
Length = 878
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 70/142 (49%), Gaps = 23/142 (16%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G + ++ V+S+S G EA ++LD++ FY E+GGQ+ D G + G + ++ + L
Sbjct: 476 GILKGEELVESISEGEEATVILDRTPFYPEKGGQVGDTGTLEGTDSLCKVTDTQNITEKL 535
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
G K + L L VGD ++ +D RRR I HTAT
Sbjct: 536 IGHK-----------------------VKVLRGKLSVGDYVEARVDEERRRAITRAHTAT 572
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H+L+ AL+ VLG Q GSLV
Sbjct: 573 HLLHKALKEVLGNHVKQAGSLV 594
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
KV+PG ++LYDT+GFP+DL + ++GL VD+E +E K+ +
Sbjct: 387 KVIPGSEVFKLYDTFGFPIDLVLEVANDEGLRVDLEGFEKLLKEQR 432
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGI 337
VVG+ ++ V+S+S G EA ++LD++ FY E+GGQ+ D G + DS+ T+
Sbjct: 474 VVGILKGEELVESISEGEEATVILDRTPFYPEKGGQVGDTGTLEG---TDSLCKVTDTQN 530
Query: 338 LLDK 341
+ +K
Sbjct: 531 ITEK 534
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 29/40 (72%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
++ V+S+S G EA ++LD++ FY E+GGQ+ D G + G +
Sbjct: 481 EELVESISEGEEATVILDRTPFYPEKGGQVGDTGTLEGTD 520
>gi|384247147|gb|EIE20634.1| hypothetical protein COCSUDRAFT_67160 [Coccomyxa subellipsoidea
C-169]
Length = 1151
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 75/167 (44%), Gaps = 24/167 (14%)
Query: 300 LLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGT-EAGILLDKSNFYAEQGGQIYDEGFM 358
+ D S Y + +S FVDS + G++L+++ FYAE GGQ+ D G +
Sbjct: 685 VTDDSPKYTPGSVKTTVRAILSASGFVDSTAGAAGPLGVVLERTPFYAESGGQVADSGEL 744
Query: 359 IGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKL 418
G + ++ ++ +K A L TLRVGD +
Sbjct: 745 AGPS---------GAIFTVQDTKVAAGYVLHVG--------------EAAEGTLRVGDTV 781
Query: 419 KLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
+D RR I+ NHT TH+LN ALR VLG DQKGS+V L
Sbjct: 782 SADVDIIRRARIVPNHTFTHVLNFALREVLGDHIDQKGSIVQPERLR 828
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 16 GDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA--KKKAQSEPESQAGMETSVEF 72
G A+ LYDTYGFP+DLT+LM EE GL +D + +E +++ +S +AG +++F
Sbjct: 612 GKDAFELYDTYGFPMDLTELMAEEMGLKLDKKAFEACMEEQRQRSRAAGKAGGGPTLKF 670
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG 98
++PE+ + SVEFCGGTHL F + SEE IAKG
Sbjct: 904 ADPEN---AKYSVEFCGGTHLKSTGQARAFALLSEEGIAKG 941
>gi|423109873|ref|ZP_17097568.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5243]
gi|376380808|gb|EHS93550.1| alanyl-tRNA synthetase [Klebsiella oxytoca 10-5243]
Length = 875
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 79/135 (58%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V++V++G EA ++LD++ FYAE GGQ+ D+G L+G+ ++
Sbjct: 480 VNAVNAGQEAVVILDQTPFYAESGGQVGDKG-------------------ELKGAGFS-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F +S+ +K + + + L+ +L+VGD ++ +D ARR+ I NH+ATH+++ AL
Sbjct: 519 ----FLVSDTQKYGQAIGHIGKLNGGSLKVGDAVQADVDQARRQRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG 65
+G
Sbjct: 439 SSG 441
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V++V++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VNAVNAGQEAVVILDQTPFYAESGGQVGDKGELKGA 515
>gi|417343253|ref|ZP_12123860.1| Alanyl-tRNA synthetase, partial [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
gi|357955624|gb|EHJ81378.1| Alanyl-tRNA synthetase, partial [Salmonella enterica subsp.
enterica serovar Baildon str. R6-199]
Length = 443
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 47 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 85
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 86 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 141
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 142 RQVLGTHVAQKGSLV 156
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 47 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKG 81
>gi|334121306|ref|ZP_08495378.1| alanyl-tRNA synthetase [Microcoleus vaginatus FGP-2]
gi|333455241|gb|EGK83896.1| alanyl-tRNA synthetase [Microcoleus vaginatus FGP-2]
Length = 883
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 111/251 (44%), Gaps = 44/251 (17%)
Query: 232 YNKQFVDSVSSGTEAGILLDKSNF--------YAEQGGQIYDEGFMIGVNDEGTVVGLRY 283
+ KQ + SG +A L D F EQG + +GF + ++ T +
Sbjct: 377 HTKQQANQQISGQDAFTLYDTYGFPLELTQEIAEEQGISVDLDGFERAMKEQQTRA--KD 434
Query: 284 NKQFVDSVSSGTEAGILLDK-------SNF--YAEQGGQIYDEGFMSNKQFVDSVSSGTE 334
+Q +D G+ LDK + F YAE E + + + V+ ++GTE
Sbjct: 435 ARQTIDLTVQGS-----LDKLAETIQGTEFVGYAELSSLAEVEVILVDGKSVEEAAAGTE 489
Query: 335 AGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSN 394
++L+++ FYAE GGQI D+G++ ++ + LV ++ K F+ F
Sbjct: 490 VQVVLNQTPFYAESGGQIGDKGYLKSGDNGDGL------LVRVDDVKKESDFFVHFGFVE 543
Query: 395 LKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQ 454
TLRVGD + ID + RR I +NHTATH+L ALR ++ Q
Sbjct: 544 --------------RGTLRVGDSITAKIDNSGRRRIQANHTATHLLQSALRKIVDDSISQ 589
Query: 455 KGSLVYRYHLH 465
GSLV L
Sbjct: 590 AGSLVSSERLR 600
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 35/45 (77%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQS 58
+ G A+ LYDTYGFP++LTQ + EE+G+SVD++ +E A K+ Q+
Sbjct: 386 ISGQDAFTLYDTYGFPLELTQEIAEEQGISVDLDGFERAMKEQQT 430
>gi|241998228|ref|XP_002433757.1| alanyl-tRNA synthetase, putative [Ixodes scapularis]
gi|215495516|gb|EEC05157.1| alanyl-tRNA synthetase, putative [Ixodes scapularis]
Length = 419
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 43/58 (74%)
Query: 408 LSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
+S TLRVGDKLKL ID RR+ +M+NHT THILN ALR VL EADQ+GSLV L
Sbjct: 30 ISGTLRVGDKLKLAIDEQRRKLVMNNHTGTHILNFALRKVLTAEADQRGSLVAPDRLR 87
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
++P S AG TS+EFCGGTHL A HVGDF I++EEAIAKG IV+ G +
Sbjct: 160 ADPSSPAGSLTSIEFCGGTHLKRAGHVGDFVITTEEAIAKGIRRIVALTGPEA 212
>gi|429849495|gb|ELA24879.1| alanyl-trna synthetase [Colletotrichum gloeosporioides Nara gc5]
Length = 955
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 35/151 (23%)
Query: 314 IYD-EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELW-- 370
IYD +GF+ + + ++ T G+LLDK+NFYAE GGQ+ D G ++ ++D ++ ++
Sbjct: 504 IYDGKGFVKSTK---DLAEKTPLGLLLDKTNFYAESGGQVADTGRIV-IDDVAEFKVLDV 559
Query: 371 --FSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRR 428
F + G +L++ L GD++ D RR
Sbjct: 560 QNFGGYIVHNG-------YLEYG-------------------ALSSGDEVICEYDELRRS 593
Query: 429 PIMSNHTATHILNHALRFVLGPEADQKGSLV 459
PI +NHT TH+LNH+LR VLG + +QKGSLV
Sbjct: 594 PIRNNHTGTHVLNHSLREVLGDDINQKGSLV 624
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
K GE K L G V WRLYDT+GFPVDLT+LM EE+ L +D + ++A++KA+
Sbjct: 404 KKGEKK-LSGAVVWRLYDTFGFPVDLTKLMAEERQLEIDEDEVKEAQEKAR 453
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
+ P++ + SVEFCGGTH+ + D I E IAKG I++Y G
Sbjct: 703 ANPKNPEWRKYSVEFCGGTHVESTGLIKDLVIVEESGIAKGIRRIIAYTG 752
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 234 KQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
K FV S ++ T G+LLDK+NFYAE GGQ+ D G ++
Sbjct: 508 KGFVKSTKDLAEKTPLGLLLDKTNFYAESGGQVADTGRIV 547
>gi|367019996|ref|XP_003659283.1| hypothetical protein MYCTH_2296109 [Myceliophthora thermophila ATCC
42464]
gi|347006550|gb|AEO54038.1| hypothetical protein MYCTH_2296109 [Myceliophthora thermophila ATCC
42464]
Length = 933
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 67/130 (51%), Gaps = 29/130 (22%)
Query: 333 TEAGILLDKSNFYAEQGGQIYDEGFMI--GVNDESQIELWFSSLVNLEGSKYALPI-FLQ 389
T G+LLD++NFYAE GGQ+ D G +I GV + F L E Y + +L+
Sbjct: 495 TPLGLLLDRTNFYAESGGQVADTGRIIIDGVAE-------FKVLDVQEYGGYVVHNGYLE 547
Query: 390 FSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLG 449
+ L GD++ D RR+PI +NHT THILNHALR VLG
Sbjct: 548 YG-------------------ELTAGDEVICEYDELRRQPIRNNHTGTHILNHALREVLG 588
Query: 450 PEADQKGSLV 459
E QKGSLV
Sbjct: 589 DEVHQKGSLV 598
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
K GE+K+ DV WRLYDT+GFP DLT+LM EE+GL++D E A++KA+
Sbjct: 378 KSGENKLSGADV-WRLYDTFGFPEDLTKLMAEERGLTIDEAEVEVAREKAR 427
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 60 PESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGS 117
P++ + SVEFCGGTH+ + D I E IAKG IV+Y G G Q+ +
Sbjct: 679 PKNPEWRKYSVEFCGGTHVEATGLIKDLIIVEESGIAKGIRRIVAYTGD-GAHQAQRDA 736
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 244 TEAGILLDKSNFYAEQGGQIYDEGFMI 270
T G+LLD++NFYAE GGQ+ D G +I
Sbjct: 495 TPLGLLLDRTNFYAESGGQVADTGRII 521
>gi|344339101|ref|ZP_08770031.1| alanyl-tRNA synthetase [Thiocapsa marina 5811]
gi|343801021|gb|EGV18965.1| alanyl-tRNA synthetase [Thiocapsa marina 5811]
Length = 866
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 74/140 (52%), Gaps = 25/140 (17%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
S + D +++G E ++LD + FYAE GGQ+ D G+++G EG
Sbjct: 465 SARGSCDQLAAGEEGLVVLDLTPFYAESGGQVGDRGWLLG-----------------EGG 507
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHI 439
++ + L KK + V L ++ L VGD+++ +D +RRR NH+ATH+
Sbjct: 508 RFEV-------LDTQKKGEGAVGHLGRVAEGILAVGDRVEARVDGSRRRATALNHSATHL 560
Query: 440 LNHALRFVLGPEADQKGSLV 459
L+ ALR VLG QKGSLV
Sbjct: 561 LHAALRRVLGEHVQQKGSLV 580
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 11/82 (13%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA------KKKA 56
+ IA LG++++ PG+ ++LYDTYGFP DLT + E+GL++DM+ +E A + +A
Sbjct: 370 EAIAGLGDTRI-PGETVFKLYDTYGFPTDLTADIARERGLALDMDGFEQAMAQQRERARA 428
Query: 57 QSEPESQAGMETSV----EFCG 74
S+ AG+E V EFCG
Sbjct: 429 ASQFGGPAGLEIDVKGETEFCG 450
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
+++E TVV L + D +++G E ++LD + FYAE GGQ+ D G++
Sbjct: 454 LHEEVTVVALYSARGSCDQLAAGEEGLVVLDLTPFYAESGGQVGDRGWL 502
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%)
Query: 238 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
D +++G E ++LD + FYAE GGQ+ D G+++G
Sbjct: 471 DQLAAGEEGLVVLDLTPFYAESGGQVGDRGWLLG 504
>gi|188589293|ref|YP_001920519.1| alanyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
gi|251779892|ref|ZP_04822812.1| alanine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|205830029|sp|B2V3W2.1|SYA_CLOBA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|188499574|gb|ACD52710.1| alanyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska E43]
gi|243084207|gb|EES50097.1| alanine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 879
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 71/141 (50%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
++ + F +S+ G A ++ D + FYAE GGQI D G + N + ++ + N+
Sbjct: 474 LVNGEDFTNSIIEGNNAVVVTDVTPFYAEMGGQIGDTGTIYNDNFKGKV---LDTKKNIG 530
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G K++ + +S L+VGDK+KL +D ARR I NHTATH
Sbjct: 531 G--------------------KIIHFVEAISGELKVGDKVKLEVDNARRENIKRNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL VLG Q GS V
Sbjct: 571 LLDAALVKVLGSHVHQAGSYV 591
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 50/73 (68%), Gaps = 6/73 (8%)
Query: 5 IAKLGES--KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQS 58
I++L E+ KVL G ++LYDT+GFP++LT+ ++E++ LS+D + + ++ +++A+S
Sbjct: 374 ISELKENNEKVLKGADGFKLYDTFGFPMELTKEILEDEDLSLDEDGFHKEMKEQRERARS 433
Query: 59 EPESQAGMETSVE 71
++ M T V+
Sbjct: 434 ARKTSNYMGTDVK 446
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYN-----KQFV 288
+ F +S+ G A ++ D + FYAE GGQI D G + N +G V+ + N FV
Sbjct: 478 EDFTNSIIEGNNAVVVTDVTPFYAEMGGQIGDTGTIYNDNFKGKVLDTKKNIGGKIIHFV 537
Query: 289 DSVSSGTEAG 298
+++S + G
Sbjct: 538 EAISGELKVG 547
>gi|437200656|ref|ZP_20711720.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
gi|435215107|gb|ELN97839.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13183-1]
Length = 825
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 429 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 467
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 468 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 523
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 524 RQVLGTHVAQKGSLV 538
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 329 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 387
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 388 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 447
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 448 YAESGGQVGDK 458
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 429 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 464
>gi|417367428|ref|ZP_12139311.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|353589251|gb|EHC48095.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
Length = 270
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 32 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 70
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 71 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 126
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 127 RQVLGTHVAQKGSLV 141
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 32 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKG 66
>gi|436751343|ref|ZP_20520169.1| alanyl-tRNA synthetase, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
gi|434970207|gb|ELL62839.1| alanyl-tRNA synthetase, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. SE30663]
Length = 470
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 74 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 112
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 113 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 168
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 169 RQVLGTHVAQKGSLV 183
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 74 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKG 108
>gi|213648835|ref|ZP_03378888.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
Length = 401
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 77/137 (56%), Gaps = 26/137 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+ V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 3 KAVEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT 43
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++
Sbjct: 44 ------FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHA 97
Query: 443 ALRFVLGPEADQKGSLV 459
ALR VLG QKGSLV
Sbjct: 98 ALRQVLGTHVAQKGSLV 114
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 29/37 (78%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
+ V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 3 KAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKG 39
>gi|418827187|ref|ZP_13382345.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
gi|392800646|gb|EJA56877.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22462]
Length = 825
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 429 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 467
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 468 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 523
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 524 RQVLGTHVAQKGSLV 538
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 329 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 387
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 388 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 447
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 448 YAESGGQVGDK 458
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 429 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 464
>gi|417520086|ref|ZP_12182066.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Uganda str. R8-3404]
gi|353644858|gb|EHC88717.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Uganda str. R8-3404]
Length = 428
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 32 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 70
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 71 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 126
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 127 RQVLGTHVAQKGSLV 141
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 32 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKG 66
>gi|340000386|ref|YP_004731270.1| alanyl-tRNA synthetase [Salmonella bongori NCTC 12419]
gi|339513748|emb|CCC31505.1| alanyl-tRNA synthetase [Salmonella bongori NCTC 12419]
Length = 876
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ +S+G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEEISAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGTGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++++ +K + + L L+ L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVNDTQKYGQAIGHLGKLAAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGAHVAQKGSLV 589
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRCRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + E I+ G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEEISAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 6/44 (13%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDE------GFMIGVND 274
V+ +S+G EA ++LD++ FYAE GGQ+ D+ GF VND
Sbjct: 480 VEEISAGQEAVVVLDQTPFYAESGGQVGDKGELKGTGFTFAVND 523
>gi|354596473|ref|ZP_09014490.1| alanyl-tRNA synthetase [Brenneria sp. EniD312]
gi|353674408|gb|EHD20441.1| alanyl-tRNA synthetase [Brenneria sp. EniD312]
Length = 875
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 26/145 (17%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N VD V++G +A ++L+++ FY E GGQ+ D+G + GVN
Sbjct: 476 NGNAVDQVAAGEDAVVILNETPFYGESGGQVGDQGELKGVN------------------- 516
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
+ F++ + +K + + + L+ LRV D ++ +D+ RR I NH+ATH+L
Sbjct: 517 ------VSFAVQDTQKYGQAIGHIGRLTQGVLRVNDSVEAIVDSERRNRIRLNHSATHLL 570
Query: 441 NHALRFVLGPEADQKGSLVYRYHLH 465
+ ALR VLG QKGSLV +L
Sbjct: 571 HAALRQVLGDHVAQKGSLVNDSYLR 595
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG---- 65
+ L G+ A+RLYDTYGFP+DLT + E+GL VD E ++ A + +G
Sbjct: 386 QGDTLDGETAFRLYDTYGFPIDLTADVCRERGLKVDEEGFDRAMDAQRQRAREASGFGVD 445
Query: 66 ------METSVEFCG 74
++ FCG
Sbjct: 446 YNNLVRVDAKTPFCG 460
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
K + +N VD V++G +A ++L+++ FY E GGQ+ D+G + GVN
Sbjct: 469 KVIALYHNGNAVDQVAAGEDAVVILNETPFYGESGGQVGDQGELKGVN 516
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
V+ L +N VD V++G +A ++L+++ FY E GGQ+ D+G
Sbjct: 470 VIALYHNGNAVDQVAAGEDAVVILNETPFYGESGGQVGDQG 510
>gi|441597619|ref|XP_004087394.1| PREDICTED: LOW QUALITY PROTEIN: alanine--tRNA ligase, cytoplasmic
[Nomascus leucogenys]
Length = 912
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/55 (63%), Positives = 43/55 (78%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ I LG+SK +PGD AW LYDTYGFPVDLT L+ EEKGL VDM+ +E+ +K AQ
Sbjct: 395 RKIQSLGDSKNIPGDTAWLLYDTYGFPVDLTGLIAEEKGLVVDMDGFEEERKLAQ 449
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 66/123 (53%), Gaps = 19/123 (15%)
Query: 301 LDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 360
LD S Y + + K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++
Sbjct: 491 LDSSGSYVFETPVATXDALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVK 550
Query: 361 VNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKL 420
V+D S+ + +F++ N + + V + T+ L+VGD+++L
Sbjct: 551 VDDSSEDK-------------------TEFTVKNAQVRGGYVLHIGTIYGDLKVGDQVRL 591
Query: 421 HID 423
ID
Sbjct: 592 FID 594
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 37/54 (68%)
Query: 221 HTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
TP K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG+++ V+D
Sbjct: 500 ETPVATXDALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYLVKVDD 553
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/45 (60%), Positives = 34/45 (75%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
T LR K FV+ VS+G E G++LDK+ FYAEQGGQIYDEG++
Sbjct: 504 ATXDALRREKMFVEEVSTGQECGVVLDKTCFYAEQGGQIYDEGYL 548
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGS 117
+P AG TSVEFCGGTHL + H G F I +EEAIAKG IV+ G++ Q GS
Sbjct: 656 DPSGPAGSLTSVEFCGGTHLRNSSHAGAFVIVTEEAIAKGIRRIVAVTGAEA--QKAPGS 713
>gi|445162149|ref|ZP_21393713.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444868889|gb|ELX93500.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
Length = 876
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|422809584|ref|ZP_16857995.1| Alanyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
gi|378753198|gb|EHY63783.1| Alanyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
Length = 879
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 72/141 (51%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ N VD V++G+EA ++ ++ FYAE GGQ+ D+G + ES+ L + V
Sbjct: 474 LIQNDTLVDEVAAGSEAQVIFKETPFYAESGGQVADKGTI-----ESETGLAYVEDVQKA 528
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+K NL + + L+ GD +KL +D +RR + NHTATH
Sbjct: 529 PNK-----------QNLHR-------VSVKEGVLKTGDTVKLAVDKVKRRETIKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 571 LLHRALKDTLGEHVNQAGSLV 591
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+L+TI AK +++ G ++LYDT+GFPV+LT+ E+ GL VD +E K+ +
Sbjct: 371 ILETILKTAKETNEQIIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKEQR 430
Query: 58 SEPESQAGMETSVEFCG 74
S S++ G
Sbjct: 431 DRARSARADVKSMQVQG 447
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 31/46 (67%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
++ L N VD V++G+EA ++ ++ FYAE GGQ+ D+G + ++
Sbjct: 471 ILYLIQNDTLVDEVAAGSEAQVIFKETPFYAESGGQVADKGTIESE 516
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 267
N VD V++G+EA ++ ++ FYAE GGQ+ D+G
Sbjct: 477 NDTLVDEVAAGSEAQVIFKETPFYAESGGQVADKG 511
>gi|116180548|ref|XP_001220123.1| hypothetical protein CHGG_00902 [Chaetomium globosum CBS 148.51]
gi|88185199|gb|EAQ92667.1| hypothetical protein CHGG_00902 [Chaetomium globosum CBS 148.51]
Length = 835
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 69/130 (53%), Gaps = 29/130 (22%)
Query: 333 TEAGILLDKSNFYAEQGGQIYDEGFMI--GVNDESQIELW-FSSLVNLEGSKYALPIFLQ 389
T G+LLDK+NFYAE GGQ+ D G ++ GV + +++ F + G +L+
Sbjct: 421 TPLGLLLDKTNFYAESGGQVADTGRILIDGVAEFKVLDVQEFGGYIVHNG-------YLE 473
Query: 390 FSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLG 449
+ L GD++ D RR+PI +NHT TH+LNHALR VLG
Sbjct: 474 YG-------------------ELTAGDEVICEYDELRRQPIRNNHTGTHVLNHALREVLG 514
Query: 450 PEADQKGSLV 459
E +QKGSLV
Sbjct: 515 EEVNQKGSLV 524
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
K GE+K+ DV WRLYDT+GFP DLT+LM EE+GL++D E A++KA+
Sbjct: 304 KSGENKLSGADV-WRLYDTFGFPEDLTKLMAEERGLTIDEAEVEVAREKAR 353
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 42/97 (43%), Gaps = 10/97 (10%)
Query: 21 RLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ---------SEPESQAGMETSVE 71
R + TY VDL+ E +V E Y D + P++ + SVE
Sbjct: 557 RDFKTYAKDVDLSLAREIEGVRAVFGETYPDPVRVVSVGVDVDELLKNPKNPEWRKVSVE 616
Query: 72 FCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGS 107
FCGGTH+ + D I E IAKG IV+Y G
Sbjct: 617 FCGGTHVDSTGAIKDLIIVEESGIAKGIRRIVAYTGD 653
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 244 TEAGILLDKSNFYAEQGGQIYDEGFMI 270
T G+LLDK+NFYAE GGQ+ D G ++
Sbjct: 421 TPLGLLLDKTNFYAESGGQVADTGRIL 447
>gi|16761603|ref|NP_457220.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|29143087|ref|NP_806429.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|213052376|ref|ZP_03345254.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E00-7866]
gi|213426121|ref|ZP_03358871.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E02-1180]
gi|213579902|ref|ZP_03361728.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-0664]
gi|213622611|ref|ZP_03375394.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
gi|213852307|ref|ZP_03381839.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
gi|289824467|ref|ZP_06544043.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|378960884|ref|YP_005218370.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
gi|20532252|sp|Q8Z4D5.1|SYA_SALTI RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|25293091|pir||AF0843 alanine-tRNA ligase (EC 6.1.1.7) - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16503904|emb|CAD05933.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29138720|gb|AAO70289.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|374354756|gb|AEZ46517.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. P-stx-12]
Length = 876
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|188534789|ref|YP_001908586.1| Alanyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
gi|188029831|emb|CAO97712.1| Alanyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
Length = 875
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 71/140 (50%), Gaps = 24/140 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
D++S+G E I+LD + FYAE GGQ+ D G + G + +S + + KYA
Sbjct: 480 ADTISAGQEGVIVLDSTPFYAESGGQVGDTGELRGNS---------ASFMVSDTHKYAQA 530
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I L+ K LRVGD + +D ARR I NH+ATH+L+ ALR
Sbjct: 531 IGHSGKLAAGK---------------LRVGDSVSAQVDEARRERIRLNHSATHLLHAALR 575
Query: 446 FVLGPEADQKGSLVYRYHLH 465
VLG QKGSLV +L
Sbjct: 576 QVLGHHVAQKGSLVNDKYLR 595
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 12/123 (9%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG---- 65
+ L G+ +RLYDT+GFPVDLT + E+ L +D +E A ++ + +G
Sbjct: 386 QGDTLDGETVFRLYDTFGFPVDLTADVCRERNLKIDEAGFERAMEQQRQRARKASGFGAD 445
Query: 66 ------METSVEFCGGTHLAMAHHVGDFCISSEEA--IAKGSNIVSYCGSKGTFQSHSGS 117
++ + EF G L + + + E A I+ G V S + G
Sbjct: 446 YNNVIHIDQASEFKGYQQLQLNAAITAIFVDGESADTISAGQEGVIVLDSTPFYAESGGQ 505
Query: 118 IND 120
+ D
Sbjct: 506 VGD 508
Score = 38.5 bits (88), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 24/35 (68%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
D++S+G E I+LD + FYAE GGQ+ D G + G
Sbjct: 480 ADTISAGQEGVIVLDSTPFYAESGGQVGDTGELRG 514
>gi|70983336|ref|XP_747195.1| alanyl-tRNA synthetase [Aspergillus fumigatus Af293]
gi|66844821|gb|EAL85157.1| alanyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
Length = 1011
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/171 (33%), Positives = 83/171 (48%), Gaps = 28/171 (16%)
Query: 290 SVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQG 349
+V T+ K N AE + + F S+ + G + GI+LD++NFYAEQG
Sbjct: 536 NVVPKTDDSAKFGKGNITAEIKAIYHGKNFHSSTA---QIPDGEQIGIILDRTNFYAEQG 592
Query: 350 GQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPI-FLQFSLSNLKKKKKLVKLLHTL 408
GQ D G +I ++ +++E+ L + Y L F+++
Sbjct: 593 GQENDTGRII-IDGRAELEVGDVQLY----AGYVLHTGFMKYG----------------- 630
Query: 409 SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+ +GD + D RR PI +NHT THILN ALR VLG +QKGSLV
Sbjct: 631 --SFSIGDAVLCEYDELRRWPIRNNHTGTHILNFALRRVLGDSVEQKGSLV 679
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
AK+ L G WRLYDT+GFPVDLT+LM EE+GL++D +E+A+ +A+ + Q
Sbjct: 457 AKIKGDDKLHGADVWRLYDTFGFPVDLTRLMAEERGLNIDDLEFEEARLRAKEASKGQKK 516
Query: 66 MET 68
T
Sbjct: 517 SAT 519
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 240 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ G + GI+LD++NFYAEQGGQ D G +I
Sbjct: 572 IPDGEQIGIILDRTNFYAEQGGQENDTGRII 602
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 61 ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
E +E S+EFCGGTH+ + D I E IAKG I++ G
Sbjct: 761 EDPRWLEVSIEFCGGTHVQKTGDIKDLIILEENGIAKGIRRIIAVTG 807
>gi|333925650|ref|YP_004499229.1| alanyl-tRNA synthetase [Serratia sp. AS12]
gi|333930603|ref|YP_004504181.1| alanyl-tRNA synthetase [Serratia plymuthica AS9]
gi|386327474|ref|YP_006023644.1| alanyl-tRNA synthetase [Serratia sp. AS13]
gi|333472210|gb|AEF43920.1| alanyl-tRNA synthetase [Serratia plymuthica AS9]
gi|333489710|gb|AEF48872.1| alanyl-tRNA synthetase [Serratia sp. AS12]
gi|333959807|gb|AEG26580.1| alanyl-tRNA synthetase [Serratia sp. AS13]
Length = 875
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 72/143 (50%), Gaps = 26/143 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q VD + +G EA ++LD++ FY E GGQ+ D+G + V +
Sbjct: 478 QPVDEIHAGEEAVVVLDETPFYGESGGQVGDKGVLKAVGAD------------------- 518
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +S+ +K + + LSH L+V D++ ID ARR I NH+ATH+L+
Sbjct: 519 ------FVVSDTQKYGQAIGHQGKLSHGVLKVKDRVDAQIDIARRNRIRLNHSATHLLHA 572
Query: 443 ALRFVLGPEADQKGSLVYRYHLH 465
ALR LG QKGSLV +L
Sbjct: 573 ALRQTLGEHVAQKGSLVNDKYLR 595
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+ L G+ A+RLYDTYGFPVDLT + E+GL VD +E A + + +G
Sbjct: 386 QGDTLDGEAAFRLYDTYGFPVDLTADVCRERGLKVDEAGFEQAMEAQRRRARESSG 441
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
+ TV L + Q VD + +G EA ++LD++ FY E GGQ+ D+G +
Sbjct: 467 QATVTALFRDGQPVDEIHAGEEAVVVLDETPFYGESGGQVGDKGVL 512
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
Q VD + +G EA ++LD++ FY E GGQ+ D+G + V
Sbjct: 478 QPVDEIHAGEEAVVVLDETPFYGESGGQVGDKGVLKAV 515
>gi|416598023|ref|ZP_11782410.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322677738|gb|EFY73801.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
Length = 876
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|168230882|ref|ZP_02655940.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
gi|194471872|ref|ZP_03077856.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|194458236|gb|EDX47075.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Kentucky str. CVM29188]
gi|205334599|gb|EDZ21363.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Kentucky str. CDC 191]
Length = 876
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|198245112|ref|YP_002216798.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|205353771|ref|YP_002227572.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|207858091|ref|YP_002244742.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|375120290|ref|ZP_09765457.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
gi|375124629|ref|ZP_09769793.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|378956447|ref|YP_005213934.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|421360409|ref|ZP_15810685.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421363183|ref|ZP_15813425.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421369506|ref|ZP_15819681.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421370147|ref|ZP_15820314.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421379112|ref|ZP_15829191.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421383217|ref|ZP_15833255.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421385134|ref|ZP_15835157.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421390081|ref|ZP_15840057.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421396507|ref|ZP_15846432.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421399286|ref|ZP_15849181.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421405491|ref|ZP_15855321.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421409812|ref|ZP_15859601.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421415119|ref|ZP_15864855.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421417276|ref|ZP_15866986.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421420614|ref|ZP_15870290.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421428260|ref|ZP_15877871.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421430702|ref|ZP_15880288.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421435870|ref|ZP_15885406.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421440288|ref|ZP_15889768.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421443654|ref|ZP_15893093.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421449125|ref|ZP_15898509.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|436799480|ref|ZP_20523766.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436807665|ref|ZP_20527708.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436818557|ref|ZP_20535190.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436832779|ref|ZP_20537069.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436852873|ref|ZP_20542898.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436861337|ref|ZP_20548521.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436867432|ref|ZP_20552586.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436872778|ref|ZP_20555660.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436880552|ref|ZP_20560311.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436891401|ref|ZP_20566101.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436899691|ref|ZP_20571102.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436903199|ref|ZP_20573663.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436914712|ref|ZP_20579559.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436919414|ref|ZP_20582195.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436928705|ref|ZP_20587911.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436938682|ref|ZP_20593469.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436945756|ref|ZP_20597584.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436955220|ref|ZP_20602095.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436965954|ref|ZP_20606623.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436969653|ref|ZP_20608650.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436985155|ref|ZP_20614740.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436994083|ref|ZP_20618652.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437004736|ref|ZP_20621966.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437022014|ref|ZP_20628142.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437027288|ref|ZP_20630177.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437043200|ref|ZP_20636713.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437050877|ref|ZP_20641022.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437062107|ref|ZP_20647473.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437067023|ref|ZP_20650085.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437073750|ref|ZP_20653192.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437082834|ref|ZP_20658577.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437096509|ref|ZP_20664874.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437110360|ref|ZP_20667706.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437118777|ref|ZP_20670512.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437129319|ref|ZP_20675795.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437135915|ref|ZP_20679553.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437145946|ref|ZP_20685735.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437153132|ref|ZP_20690238.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437158939|ref|ZP_20693527.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437168819|ref|ZP_20699257.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437176049|ref|ZP_20703225.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437184277|ref|ZP_20708142.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437264525|ref|ZP_20719801.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437269615|ref|ZP_20722858.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437277827|ref|ZP_20727186.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437302048|ref|ZP_20733382.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437315655|ref|ZP_20737343.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437327486|ref|ZP_20740428.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437341555|ref|ZP_20744678.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437369099|ref|ZP_20749104.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437408213|ref|ZP_20752369.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437445557|ref|ZP_20758279.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437463160|ref|ZP_20762842.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437483922|ref|ZP_20769006.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437495676|ref|ZP_20772820.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437519258|ref|ZP_20778628.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437526980|ref|ZP_20779988.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437555801|ref|ZP_20784768.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437574001|ref|ZP_20789663.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437594209|ref|ZP_20795756.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437605294|ref|ZP_20799473.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437620337|ref|ZP_20804057.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437644635|ref|ZP_20808720.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|437664752|ref|ZP_20814366.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437675421|ref|ZP_20816756.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|437710952|ref|ZP_20826630.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437721551|ref|ZP_20829075.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|437796058|ref|ZP_20837573.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|437808258|ref|ZP_20839963.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437864249|ref|ZP_20848039.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438094874|ref|ZP_20861829.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438101497|ref|ZP_20864324.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|438116097|ref|ZP_20870616.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|438121009|ref|ZP_20872117.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|445130018|ref|ZP_21381065.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|445145594|ref|ZP_21387556.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|445159875|ref|ZP_21393363.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|445185522|ref|ZP_21398975.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445220785|ref|ZP_21403039.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445244885|ref|ZP_21408136.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445336182|ref|ZP_21415624.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445351793|ref|ZP_21420526.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445364902|ref|ZP_21425059.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|197939628|gb|ACH76961.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|205273552|emb|CAR38539.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|206709894|emb|CAR34247.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|326624557|gb|EGE30902.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. SD3246]
gi|326628879|gb|EGE35222.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum str. SG9]
gi|357207058|gb|AET55104.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Gallinarum/pullorum str. RKS5078]
gi|395980976|gb|EJH90198.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395981629|gb|EJH90850.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395987644|gb|EJH96806.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|395995447|gb|EJI04512.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|395995451|gb|EJI04515.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396007317|gb|EJI16273.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|396008961|gb|EJI17894.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396015140|gb|EJI24023.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396018766|gb|EJI27628.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396023565|gb|EJI32363.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396023745|gb|EJI32537.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396027380|gb|EJI36143.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396035154|gb|EJI43835.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396042111|gb|EJI50733.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396043659|gb|EJI52257.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396048295|gb|EJI56844.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396054528|gb|EJI63020.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396056282|gb|EJI64758.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396068423|gb|EJI76771.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|396069285|gb|EJI77623.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396070422|gb|EJI78750.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|434943349|gb|ELL49487.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Pullorum str. ATCC 9120]
gi|434959510|gb|ELL52956.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434968621|gb|ELL61373.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434971101|gb|ELL63662.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434981378|gb|ELL73265.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434984218|gb|ELL75958.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434985781|gb|ELL77468.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434992584|gb|ELL84023.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|434999635|gb|ELL90809.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435005396|gb|ELL96318.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435005530|gb|ELL96450.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435012826|gb|ELM03501.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435019629|gb|ELM10073.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435022794|gb|ELM13090.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435029249|gb|ELM19307.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435033395|gb|ELM23287.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435034206|gb|ELM24096.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435035328|gb|ELM25173.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435045596|gb|ELM35222.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435046364|gb|ELM35979.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435058971|gb|ELM48278.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435062785|gb|ELM51959.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435064708|gb|ELM53828.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435072027|gb|ELM60956.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435077248|gb|ELM66004.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435083850|gb|ELM72451.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435085347|gb|ELM73900.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435088591|gb|ELM77048.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435093581|gb|ELM81921.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435097829|gb|ELM86088.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435107551|gb|ELM95534.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435108010|gb|ELM95988.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435108407|gb|ELM96372.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435118610|gb|ELN06261.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435126539|gb|ELN13933.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435131499|gb|ELN18710.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435136191|gb|ELN23281.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435137461|gb|ELN24512.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435140883|gb|ELN27825.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435149296|gb|ELN35992.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435150414|gb|ELN37086.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435156720|gb|ELN43210.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435159532|gb|ELN45850.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435160888|gb|ELN47130.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435172562|gb|ELN58105.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435173223|gb|ELN58748.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435178128|gb|ELN63364.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435180131|gb|ELN65239.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435191667|gb|ELN76223.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435193221|gb|ELN77700.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435204948|gb|ELN88597.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435207345|gb|ELN90818.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435209946|gb|ELN93217.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435217353|gb|ELN99787.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435218437|gb|ELO00838.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435226466|gb|ELO08031.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435227563|gb|ELO09054.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435242251|gb|ELO22562.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435246055|gb|ELO26076.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435247414|gb|ELO27365.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435251534|gb|ELO31145.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435257237|gb|ELO36531.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435257566|gb|ELO36848.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435265555|gb|ELO44383.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435273632|gb|ELO51897.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648904 3-6]
gi|435277509|gb|ELO55450.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435288441|gb|ELO65460.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435290855|gb|ELO67748.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 76-2651]
gi|435294363|gb|ELO70999.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|435299926|gb|ELO76021.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435314441|gb|ELO87866.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435324180|gb|ELO96113.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435327612|gb|ELO99263.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|435335949|gb|ELP06015.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|444844416|gb|ELX69656.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|444846367|gb|ELX71548.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|444852409|gb|ELX77488.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|444870040|gb|ELX94584.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444870488|gb|ELX94990.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444874138|gb|ELX98404.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444874270|gb|ELX98535.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444883112|gb|ELY07020.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444890489|gb|ELY13818.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
Length = 876
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|418774442|ref|ZP_13330411.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|392751254|gb|EJA08209.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
Length = 876
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|436608292|ref|ZP_20513605.1| alanyl-tRNA synthetase, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
gi|434970472|gb|ELL63058.1| alanyl-tRNA synthetase, partial [Salmonella enterica subsp.
enterica serovar Enteritidis str. 22704]
Length = 863
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 467 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 505
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 506 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 561
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 562 RQVLGTHVAQKGSLV 576
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 367 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 425
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 426 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 485
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 486 YAESGGQVGDK 496
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 467 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 502
>gi|168262064|ref|ZP_02684037.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|200387922|ref|ZP_03214534.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|416425094|ref|ZP_11692129.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416428272|ref|ZP_11693772.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416438728|ref|ZP_11699707.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416444997|ref|ZP_11704041.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416451728|ref|ZP_11708478.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416459694|ref|ZP_11714139.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416471519|ref|ZP_11719239.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416475510|ref|ZP_11720657.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416488620|ref|ZP_11725833.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416499449|ref|ZP_11730816.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416544803|ref|ZP_11753059.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416576943|ref|ZP_11769469.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416584965|ref|ZP_11774569.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416590574|ref|ZP_11777828.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416606621|ref|ZP_11787889.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416616498|ref|ZP_11794122.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416621840|ref|ZP_11796603.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416627129|ref|ZP_11799000.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416640360|ref|ZP_11804978.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416647453|ref|ZP_11808392.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416656581|ref|ZP_11813267.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|416667825|ref|ZP_11818505.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416679149|ref|ZP_11822873.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416691442|ref|ZP_11826221.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416706281|ref|ZP_11831540.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416712040|ref|ZP_11835751.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416718236|ref|ZP_11840344.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416726820|ref|ZP_11846865.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416731056|ref|ZP_11848991.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416741150|ref|ZP_11854901.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416749479|ref|ZP_11859268.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416753629|ref|ZP_11860933.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416765270|ref|ZP_11868651.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416768830|ref|ZP_11870828.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|418482086|ref|ZP_13051109.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418493530|ref|ZP_13059996.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418501079|ref|ZP_13067469.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418505327|ref|ZP_13071673.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418510560|ref|ZP_13076839.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418512177|ref|ZP_13078420.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|418524861|ref|ZP_13090846.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|199605020|gb|EDZ03565.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Virchow str. SL491]
gi|205349249|gb|EDZ35880.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Hadar str. RI_05P066]
gi|322614354|gb|EFY11285.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322621581|gb|EFY18434.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322624442|gb|EFY21275.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322628773|gb|EFY25556.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322633500|gb|EFY30242.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322635924|gb|EFY32632.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322639632|gb|EFY36317.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322646815|gb|EFY43318.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322650583|gb|EFY46988.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322654805|gb|EFY51124.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322659025|gb|EFY55278.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322664408|gb|EFY60602.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322668343|gb|EFY64500.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322673677|gb|EFY69778.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322681432|gb|EFY77464.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322683834|gb|EFY79844.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323193777|gb|EFZ78980.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323200247|gb|EFZ85329.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323203250|gb|EFZ88279.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323212791|gb|EFZ97602.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|323216317|gb|EGA01044.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323221065|gb|EGA05496.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323226886|gb|EGA11068.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323230830|gb|EGA14948.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323234819|gb|EGA18905.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323238858|gb|EGA22908.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323241558|gb|EGA25589.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323248295|gb|EGA32231.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323251121|gb|EGA34994.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323255840|gb|EGA39588.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323263139|gb|EGA46677.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323264356|gb|EGA47862.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323271183|gb|EGA54611.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|366064383|gb|EHN28582.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366064819|gb|EHN29016.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366067051|gb|EHN31205.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366067634|gb|EHN31782.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366076151|gb|EHN40190.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366083684|gb|EHN47600.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|366830430|gb|EHN57301.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372207720|gb|EHP21219.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
Length = 876
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|16766133|ref|NP_461748.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|168245264|ref|ZP_02670196.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|168464053|ref|ZP_02697970.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|194443356|ref|YP_002042068.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194450006|ref|YP_002046787.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|197264802|ref|ZP_03164876.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|374981458|ref|ZP_09722785.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|378446184|ref|YP_005233816.1| AlaRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|378451563|ref|YP_005238923.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378700739|ref|YP_005182696.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378985416|ref|YP_005248572.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|378990152|ref|YP_005253316.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|379702079|ref|YP_005243807.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|383497502|ref|YP_005398191.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|386592516|ref|YP_006088916.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|418760331|ref|ZP_13316488.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|418764694|ref|ZP_13320789.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|418773020|ref|ZP_13329012.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|418779570|ref|ZP_13335469.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|418783881|ref|ZP_13339725.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|418787833|ref|ZP_13343632.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|418793504|ref|ZP_13349233.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|418799220|ref|ZP_13354887.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|418800549|ref|ZP_13356200.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|418806019|ref|ZP_13361593.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|418809924|ref|ZP_13365467.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|418816042|ref|ZP_13371536.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|418823625|ref|ZP_13379032.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|418829909|ref|ZP_13384873.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|418836846|ref|ZP_13391728.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|418841833|ref|ZP_13396648.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|418847802|ref|ZP_13402543.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|418852649|ref|ZP_13407348.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|418867304|ref|ZP_13421763.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|419731890|ref|ZP_14258798.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419735512|ref|ZP_14262385.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419737099|ref|ZP_14263923.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419741681|ref|ZP_14268359.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419748188|ref|ZP_14274687.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|419787855|ref|ZP_14313557.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|419793529|ref|ZP_14319150.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|421569892|ref|ZP_16015588.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421575116|ref|ZP_16020730.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421580457|ref|ZP_16026015.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421584143|ref|ZP_16029653.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|422027037|ref|ZP_16373383.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422032071|ref|ZP_16378188.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427553706|ref|ZP_18928682.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427571262|ref|ZP_18933399.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427591970|ref|ZP_18938198.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427615169|ref|ZP_18943082.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427639399|ref|ZP_18947964.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427657058|ref|ZP_18952713.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427662369|ref|ZP_18957674.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427675894|ref|ZP_18962491.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|20532254|sp|Q8ZMK6.1|SYA_SALTY RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|16421372|gb|AAL21707.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|194402019|gb|ACF62241.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|194408310|gb|ACF68529.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|195633250|gb|EDX51664.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. SL317]
gi|197243057|gb|EDY25677.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA23]
gi|205335995|gb|EDZ22759.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL486]
gi|261247963|emb|CBG25796.1| AlaRS [Salmonella enterica subsp. enterica serovar Typhimurium str.
D23580]
gi|267994942|gb|ACY89827.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301159387|emb|CBW18905.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312913845|dbj|BAJ37819.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. T000240]
gi|321223380|gb|EFX48446.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. TN061786]
gi|323131178|gb|ADX18608.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|332989699|gb|AEF08682.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|380464323|gb|AFD59726.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|381290521|gb|EIC31785.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381293836|gb|EIC34976.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381307138|gb|EIC48004.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381314942|gb|EIC55707.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|381315048|gb|EIC55811.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|383799557|gb|AFH46639.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Heidelberg str. B182]
gi|392616888|gb|EIW99316.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|392618791|gb|EIX01183.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|392730277|gb|EIZ87522.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|392742439|gb|EIZ99527.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|392742959|gb|EJA00037.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|392751983|gb|EJA08926.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|392756165|gb|EJA13063.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|392764194|gb|EJA20996.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392764627|gb|EJA21425.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|392764742|gb|EJA21536.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|392782652|gb|EJA39283.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|392783423|gb|EJA40044.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|392783688|gb|EJA40303.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|392785616|gb|EJA42187.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|392790645|gb|EJA47139.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|392799968|gb|EJA56207.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|392802703|gb|EJA58912.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|392807903|gb|EJA63966.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|392824309|gb|EJA80096.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|392829053|gb|EJA84737.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|392839437|gb|EJA94977.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|402520213|gb|EJW27567.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402522768|gb|EJW30088.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402525928|gb|EJW33210.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402531483|gb|EJW38694.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|414015292|gb|EKS99108.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414016286|gb|EKT00059.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414016974|gb|EKT00724.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414029536|gb|EKT12693.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414031083|gb|EKT14158.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414034613|gb|EKT17538.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414044461|gb|EKT26903.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414044990|gb|EKT27417.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414050199|gb|EKT32380.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414057442|gb|EKT39196.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
Length = 876
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|340914733|gb|EGS18074.1| cytoplasmic alanyl-tRNA synthetase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1105
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 67/130 (51%), Gaps = 29/130 (22%)
Query: 333 TEAGILLDKSNFYAEQGGQIYDEGFMI--GVNDESQIELWFSSLVNLEGSKYALPI-FLQ 389
T G+LLDK+NFYAE GGQ+ D G +I GV + F L E Y + +L+
Sbjct: 667 TPLGLLLDKTNFYAESGGQVADTGRIIIDGVAE-------FKVLDVQEYGGYIVHNGYLE 719
Query: 390 FSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLG 449
+ L GD++ D RR+PI +NHT THILNHALR VLG
Sbjct: 720 YG-------------------ELTAGDEVICEYDELRRQPIRNNHTGTHILNHALREVLG 760
Query: 450 PEADQKGSLV 459
E QKGSLV
Sbjct: 761 DEVHQKGSLV 770
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
K G +K+ DV WRLYDT+GFP DLT+LM EE+GL++D E A++KA+
Sbjct: 550 KDGSNKLSGADV-WRLYDTFGFPEDLTKLMAEERGLTIDEAEVEVAREKAR 599
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 14/91 (15%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + +S+ M+V E K P++ + S+EFCGGTH+
Sbjct: 829 ETYPNPVRV---------VSIGMDVDELLKN-----PKNPEWRKYSIEFCGGTHVDNTGL 874
Query: 84 VGDFCISSEEAIAKGSNIVSYCGSKGTFQSH 114
+ DF I E IAKG + C G Q+
Sbjct: 875 IKDFIIVEESGIAKGIRRIVACTGDGAHQAQ 905
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 244 TEAGILLDKSNFYAEQGGQIYDEGFMI 270
T G+LLDK+NFYAE GGQ+ D G +I
Sbjct: 667 TPLGLLLDKTNFYAESGGQVADTGRII 693
>gi|452842093|gb|EME44029.1| hypothetical protein DOTSEDRAFT_44310 [Dothistroma septosporum
NZE10]
Length = 960
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 72/139 (51%), Gaps = 29/139 (20%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q V G + G++LDK+NFYAEQGGQ D G ++ ++ E++I++
Sbjct: 517 QSTKEVPEGEQFGVVLDKTNFYAEQGGQENDAGSLL-IDGEAEIDV-------------- 561
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
N++ V LHT L VG ++ RR+PI +NHT THIL
Sbjct: 562 ---------QNVQSYAGFV--LHTGYMKEGVLNVGSEVLCQYSEERRQPIRNNHTGTHIL 610
Query: 441 NHALRFVLGPEADQKGSLV 459
N ALR VLG + +QKGSLV
Sbjct: 611 NFALREVLGDDINQKGSLV 629
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 37/52 (71%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+K SK + G +RLYDTYGFPVDLT+LM EE+GL +D E +A+KK Q
Sbjct: 407 SKTKGSKDIAGADVFRLYDTYGFPVDLTKLMAEERGLDIDEEAVAEAEKKHQ 458
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
Q V G + G++LDK+NFYAEQGGQ D G ++
Sbjct: 517 QSTKEVPEGEQFGVVLDKTNFYAEQGGQENDAGSLL 552
>gi|316932874|ref|YP_004107856.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
gi|315600588|gb|ADU43123.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
Length = 890
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 71/135 (52%), Gaps = 25/135 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++ +G A I+++++ FYAE GGQ+ D G + +G ++ +
Sbjct: 479 VDALKAGDAAAIVMNQTPFYAESGGQVGDTGVLAA-----------------DGVRFVVT 521
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
LKK L T+ T+++GD L L +D ARR I +NH+ATH+L+ AL
Sbjct: 522 -------ETLKKAGDLFVHFGTVEQGTIKLGDALALDVDHARRSAIRANHSATHLLHEAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGDHIAQKGSLV 589
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
A L + + G+ A+ LYDTYGFP+DLTQ + +G++VD+ + DA + +++ +
Sbjct: 375 AGLKKGDMFDGETAFTLYDTYGFPLDLTQDALRNRGINVDIASFTDAMDRQRAKARA 431
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
EG V+ L + VD++ +G A I+++++ FYAE GGQ+ D G ++
Sbjct: 466 EGVVMALVKDGTEVDALKAGDAAAIVMNQTPFYAESGGQVGDTGVLA 512
>gi|119484060|ref|XP_001261933.1| alanyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
gi|119410089|gb|EAW20036.1| alanyl-tRNA synthetase, putative [Neosartorya fischeri NRRL 181]
Length = 961
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 79/158 (50%), Gaps = 28/158 (17%)
Query: 303 KSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 362
K N AE + + F S+ + G + GI+LD++NFYAEQGGQ D G +I ++
Sbjct: 499 KGNITAEIKAIYHGKNFHSSTA---QIPDGEQIGIILDRTNFYAEQGGQENDTGRII-ID 554
Query: 363 DESQIELWFSSLVNLEGSKYALPI-FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLH 421
+++E+ L + Y L F+++ + +GD +
Sbjct: 555 GRAELEVGDVQLY----AGYVLHTGFMKYG-------------------SFSIGDAVLCE 591
Query: 422 IDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
D RR PI +NHT THILN ALR VLG +QKGSLV
Sbjct: 592 YDELRRWPIRNNHTGTHILNFALRRVLGDSVEQKGSLV 629
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMET 68
G+ K+ DV WRLYDT+GFPVDLT+LM EE+GL++D +E+A+ +A+ + Q T
Sbjct: 411 GDDKLHGADV-WRLYDTFGFPVDLTRLMAEERGLNIDDLEFEEARLRAKEASKGQKKSAT 469
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 240 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ G + GI+LD++NFYAEQGGQ D G +I
Sbjct: 522 IPDGEQIGIILDRTNFYAEQGGQENDTGRII 552
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 61 ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
E +E S+EFCGGTH+ + D I E IAKG I++ G
Sbjct: 711 EDPRWLEVSIEFCGGTHVQKTGDIKDLIILEENGIAKGIRRIIAVTG 757
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 291 VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+ G + GI+LD++NFYAEQGGQ D G
Sbjct: 522 IPDGEQIGIILDRTNFYAEQGGQENDTG 549
>gi|255026679|ref|ZP_05298665.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
Length = 879
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ N VD V++G EA ++ ++ FYAE GGQ+ D+G + ES+ L + V
Sbjct: 474 LIQNDTLVDEVAAGNEAQVIFKETPFYAESGGQVADKGTI-----ESETGLAYVEDVQKA 528
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+K NL + + L+ GD +KL +D +RR + NHTATH
Sbjct: 529 PNK-----------QNLHR-------ISVKEGVLKTGDTVKLAVDKVKRRETIKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 571 LLHRALKDTLGEHVNQAGSLV 591
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKK 55
+L+TI AK +V+ G ++LYDT+GFPV+LT+ E+ GL VD +E K+
Sbjct: 371 ILETILKTAKETNEQVIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKE 428
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
++ L N VD V++G EA ++ ++ FYAE GGQ+ D+G + ++
Sbjct: 471 ILYLIQNDTLVDEVAAGNEAQVIFKETPFYAESGGQVADKGTIESE 516
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 200 LVSSCGFIGSDTGLGDLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQ 259
L F+G ++ T+H + L N VD V++G EA ++ ++ FYAE
Sbjct: 453 LTEKSAFVGYNS-------TEHVSEI--LYLIQNDTLVDEVAAGNEAQVIFKETPFYAES 503
Query: 260 GGQIYDEG 267
GGQ+ D+G
Sbjct: 504 GGQVADKG 511
>gi|238909593|ref|ZP_04653430.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
Length = 876
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|427799954|ref|ZP_18967786.1| alanyl-tRNA ligase, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|414063882|gb|EKT44951.1| alanyl-tRNA ligase, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
Length = 425
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 68 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 106
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 107 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 162
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 163 RQVLGTHVAQKGSLV 177
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 68 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKG 102
>gi|418843370|ref|ZP_13398167.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|418856881|ref|ZP_13411517.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|418862499|ref|ZP_13417039.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|392816706|gb|EJA72628.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|392835766|gb|EJA91357.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|392835901|gb|EJA91490.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
Length = 876
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|90412109|ref|ZP_01220116.1| alanyl-tRNA synthetase [Photobacterium profundum 3TCK]
gi|90327087|gb|EAS43466.1| alanyl-tRNA synthetase [Photobacterium profundum 3TCK]
Length = 873
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 70/135 (51%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL-EGSKYAL 384
VDS+ +G +A I+LD + FYAE GGQ D G + S++ N+ + K+
Sbjct: 478 VDSILAGEDALIILDNTPFYAESGGQCGDAGVLTAE----------STMFNVTDTQKFGA 527
Query: 385 PIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
I Q SL + L +GDKL+ +D ARR I NH+ATH+L+ AL
Sbjct: 528 AIGHQGSL---------------VQGALNIGDKLEAQVDVARRAAITLNHSATHLLHSAL 572
Query: 445 RFVLGPEADQKGSLV 459
R +LG QKGSLV
Sbjct: 573 RNLLGEHVAQKGSLV 587
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------ 65
K L G+ ++LYDTYGFP DLT + E+ ++D E + +A +AQ + +AG
Sbjct: 386 KELDGETVFKLYDTYGFPADLTNDVARERDFTIDEEGFNNA-MEAQRQRAREAGKFGVDY 444
Query: 66 -----METSVEFCGGTHLAMAHHV---------GDFCISSEEAIAKGSNIVSY------C 105
++ + EFCG T A + D ++ E+A+ N Y C
Sbjct: 445 NESIKVDVNTEFCGYTGTAAQSRIIALYRDGEAVDSILAGEDALIILDNTPFYAESGGQC 504
Query: 106 GSKGTFQSHSGSINDEMVNKYPSLYRLFRTVHKQKYVQDALNV 148
G G + S N K+ + H+ VQ ALN+
Sbjct: 505 GDAGVLTAESTMFNVTDTQKFGAAIG-----HQGSLVQGALNI 542
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 47/207 (22%)
Query: 264 YDEGFMIGVNDE-----GT-----VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQ 313
Y+E + VN E GT ++ L + + VDS+ +G +A I+LD + FYAE GGQ
Sbjct: 444 YNESIKVDVNTEFCGYTGTAAQSRIIALYRDGEAVDSILAGEDALIILDNTPFYAESGGQ 503
Query: 314 IYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQG--GQIYDEGFMIGVNDESQIE--- 368
D G ++ + + +V+ D F A G G + IG E+Q++
Sbjct: 504 CGDAGVLTAESTMFNVT---------DTQKFGAAIGHQGSLVQGALNIGDKLEAQVDVAR 554
Query: 369 ------------LWFSSLVNLEGSKYAL------PIFLQFSLSNLK--KKKKLVKLLHTL 408
L S+L NL G A L+F SNL+ K ++L ++ +
Sbjct: 555 RAAITLNHSATHLLHSALRNLLGEHVAQKGSLVKADALRFDFSNLEAVKPEQLREIERVV 614
Query: 409 SHTLRVG---DKLKLHIDTARRRPIMS 432
+ +R+ D + I++A+++ M+
Sbjct: 615 NEQIRLNHSIDTNIMDIESAKQKGAMA 641
>gi|342878270|gb|EGU79625.1| hypothetical protein FOXB_09908 [Fusarium oxysporum Fo5176]
Length = 959
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 80/151 (52%), Gaps = 35/151 (23%)
Query: 314 IYD-EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFS 372
IYD + F+ + + V T G+L+DK+NFYAE GGQ+ D G ++ ++D ++ ++
Sbjct: 507 IYDGQSFLKSTK---DVPEKTALGLLIDKTNFYAESGGQVADTGRIV-IDDVAEFKV--- 559
Query: 373 SLVNLEGSKYALPI----FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRR 428
L+ Y I ++++ TL GD++ D RR
Sbjct: 560 ----LDVQNYGGYILHSGYIEYG-------------------TLSSGDEVICEYDELRRS 596
Query: 429 PIMSNHTATHILNHALRFVLGPEADQKGSLV 459
PI +NH+ THILNH+LR VLG + +QKGSLV
Sbjct: 597 PIRNNHSGTHILNHSLREVLGDDVNQKGSLV 627
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
A G SK L GDV WRLYDT+GFPVDLT+LM EE+ L +D E A+ KA+ E+
Sbjct: 405 ATKGGSKKLEGDVVWRLYDTFGFPVDLTRLMAEERSLEIDDAEVEAARIKAR---EASKA 461
Query: 66 METSVE 71
++ SV+
Sbjct: 462 VKESVQ 467
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
++P+ + + SVEFCGGTH+ + D + E IAKG I++Y G
Sbjct: 706 ADPKKKEWRQYSVEFCGGTHVEQTGLIKDLILIEESGIAKGIRRIIAYTG 755
Score = 38.9 bits (89), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 240 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
V T G+L+DK+NFYAE GGQ+ D G ++
Sbjct: 520 VPEKTALGLLIDKTNFYAESGGQVADTGRIV 550
>gi|284801894|ref|YP_003413759.1| alanyl-tRNA synthetase [Listeria monocytogenes 08-5578]
gi|284995036|ref|YP_003416804.1| alanyl-tRNA synthetase [Listeria monocytogenes 08-5923]
gi|284057456|gb|ADB68397.1| alanyl-tRNA synthetase [Listeria monocytogenes 08-5578]
gi|284060503|gb|ADB71442.1| alanyl-tRNA synthetase [Listeria monocytogenes 08-5923]
Length = 832
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ N VD V++G EA ++ ++ FYAE GGQ+ D+G + ES+ L + V
Sbjct: 427 LIQNDTLVDEVAAGNEAQVIFKETPFYAESGGQVADKGTI-----ESETGLAYVEDVQKA 481
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+K NL + + L+ GD +KL +D +RR + NHTATH
Sbjct: 482 PNK-----------QNLHR-------ISVKEGVLKTGDTVKLAVDRVKRRETIKNHTATH 523
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 524 LLHRALKDTLGEHVNQAGSLV 544
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKK 55
+L+TI AK +V+ G ++LYDT+GFPV+LT+ E+ GL VD +E K+
Sbjct: 324 ILETILKTAKETNEQVIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKE 381
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 27/40 (67%)
Query: 284 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
N VD V++G EA ++ ++ FYAE GGQ+ D+G + ++
Sbjct: 430 NDTLVDEVAAGNEAQVIFKETPFYAESGGQVADKGTIESE 469
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 200 LVSSCGFIGSDTGLGDLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQ 259
L F+G ++ T+H + L N VD V++G EA ++ ++ FYAE
Sbjct: 406 LTEKSAFVGYNS-------TEHVSEI--LYLIQNDTLVDEVAAGNEAQVIFKETPFYAES 456
Query: 260 GGQIYDEG 267
GGQ+ D+G
Sbjct: 457 GGQVADKG 464
>gi|386053757|ref|YP_005971315.1| alanyl-tRNA synthetase [Listeria monocytogenes Finland 1998]
gi|346646408|gb|AEO39033.1| alanyl-tRNA synthetase [Listeria monocytogenes Finland 1998]
Length = 879
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ N VD V++G EA ++ ++ FYAE GGQ+ D+G + ES+ L + V
Sbjct: 474 LIQNDTLVDEVAAGNEAQVIFKETPFYAESGGQVADKGTI-----ESETGLAYVEDVQKA 528
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+K NL + + L+ GD +KL +D +RR + NHTATH
Sbjct: 529 PNK-----------QNLHR-------ISVKEGVLKTGDTVKLAVDKVKRRETIKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 571 LLHRALKDTLGEHVNQAGSLV 591
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKK 55
+L+TI AK +V+ G ++LYDT+GFPV+LT+ E+ GL VD +E K+
Sbjct: 371 ILETILKTAKETNEQVIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKE 428
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 281 LRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
L N VD V++G EA ++ ++ FYAE GGQ+ D+G + ++
Sbjct: 474 LIQNDTLVDEVAAGNEAQVIFKETPFYAESGGQVADKGTIESE 516
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 200 LVSSCGFIGSDTGLGDLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQ 259
L F+G ++ T+H + L N VD V++G EA ++ ++ FYAE
Sbjct: 453 LTEKSAFVGYNS-------TEHVSEI--LYLIQNDTLVDEVAAGNEAQVIFKETPFYAES 503
Query: 260 GGQIYDEG 267
GGQ+ D+G
Sbjct: 504 GGQVADKG 511
>gi|404283996|ref|YP_006684893.1| alanyl-tRNA synthetase [Listeria monocytogenes SLCC2372]
gi|404233498|emb|CBY54901.1| alanyl-tRNA synthetase [Listeria monocytogenes SLCC2372]
Length = 879
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ N VD V++G EA ++ ++ FYAE GGQ+ D+G + ES+ L + V
Sbjct: 474 LIQNDTLVDEVAAGNEAQVIFKETPFYAESGGQVADKGTI-----ESETGLAYVEDVQKA 528
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+K NL + + L+ GD +KL +D +RR + NHTATH
Sbjct: 529 PNK-----------QNLHR-------ISVKEGVLKTGDTVKLAVDKVKRRETIKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 571 LLHRALKDTLGEHVNQAGSLV 591
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKK 55
+L+TI AK +V+ G ++LYDT+GFPV+LT+ E+ GL VD +E K+
Sbjct: 371 ILETILKTAKETNEQVIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKE 428
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 281 LRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
L N VD V++G EA ++ ++ FYAE GGQ+ D+G + ++
Sbjct: 474 LIQNDTLVDEVAAGNEAQVIFKETPFYAESGGQVADKGTIESE 516
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 200 LVSSCGFIGSDTGLGDLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQ 259
L F+G ++ T+H + L N VD V++G EA ++ ++ FYAE
Sbjct: 453 LTEKSAFVGYNS-------TEHVSEI--LYLIQNDTLVDEVAAGNEAQVIFKETPFYAES 503
Query: 260 GGQIYDEG 267
GGQ+ D+G
Sbjct: 504 GGQVADKG 511
>gi|254828262|ref|ZP_05232949.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
gi|258600650|gb|EEW13975.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
Length = 879
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ N VD V++G EA ++ ++ FYAE GGQ+ D+G + ES+ L + V
Sbjct: 474 LIQNDTLVDEVAAGNEAQVIFKETPFYAESGGQVADKGTI-----ESETGLAYVEDVQKA 528
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+K NL + + L+ GD +KL +D +RR + NHTATH
Sbjct: 529 PNK-----------QNLHR-------ISVKEGVLKTGDTVKLAVDKVKRRETIKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 571 LLHRALKDTLGEHVNQAGSLV 591
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKK 55
+L+TI AK +V+ G ++LYDT+GFPV+LT+ E+ GL VD +E K+
Sbjct: 371 ILETILKTAKETNEQVIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKE 428
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 281 LRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
L N VD V++G EA ++ ++ FYAE GGQ+ D+G + ++
Sbjct: 474 LIQNDTLVDEVAAGNEAQVIFKETPFYAESGGQVADKGTIESE 516
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 200 LVSSCGFIGSDTGLGDLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQ 259
L F+G ++ T+H + L N VD V++G EA ++ ++ FYAE
Sbjct: 453 LTEKSAFVGYNS-------TEHVSEI--LYLIQNDTLVDEVAAGNEAQVIFKETPFYAES 503
Query: 260 GGQIYDEG 267
GGQ+ D+G
Sbjct: 504 GGQVADKG 511
>gi|16803544|ref|NP_465029.1| alanyl-tRNA synthetase [Listeria monocytogenes EGD-e]
gi|47097201|ref|ZP_00234765.1| alanyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
gi|254912178|ref|ZP_05262190.1| alanyl-tRNA synthetase [Listeria monocytogenes J2818]
gi|254936506|ref|ZP_05268203.1| alanyl-tRNA synthetase [Listeria monocytogenes F6900]
gi|386047156|ref|YP_005965488.1| alanyl-tRNA synthetase [Listeria monocytogenes J0161]
gi|386050480|ref|YP_005968471.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
gi|404413583|ref|YP_006699170.1| alanyl-tRNA synthetase [Listeria monocytogenes SLCC7179]
gi|405758552|ref|YP_006687828.1| alanyl-tRNA synthetase [Listeria monocytogenes SLCC2479]
gi|20532249|sp|Q8Y722.1|SYA_LISMO RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|16410933|emb|CAC99582.1| alanyl-tRNA synthetase [Listeria monocytogenes EGD-e]
gi|47014415|gb|EAL05384.1| alanyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
gi|258609100|gb|EEW21708.1| alanyl-tRNA synthetase [Listeria monocytogenes F6900]
gi|293590151|gb|EFF98485.1| alanyl-tRNA synthetase [Listeria monocytogenes J2818]
gi|345534147|gb|AEO03588.1| alanyl-tRNA synthetase [Listeria monocytogenes J0161]
gi|346424326|gb|AEO25851.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
gi|404236434|emb|CBY57836.1| alanyl-tRNA synthetase [Listeria monocytogenes SLCC2479]
gi|404239282|emb|CBY60683.1| alanyl-tRNA synthetase [Listeria monocytogenes SLCC7179]
gi|441471197|emb|CCQ20952.1| Alanine--tRNA ligase [Listeria monocytogenes]
gi|441474326|emb|CCQ24080.1| Alanine--tRNA ligase [Listeria monocytogenes N53-1]
Length = 879
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ N VD V++G EA ++ ++ FYAE GGQ+ D+G + ES+ L + V
Sbjct: 474 LIQNDTLVDEVAAGNEAQVIFKETPFYAESGGQVADKGTI-----ESETGLAYVEDVQKA 528
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+K NL + + L+ GD +KL +D +RR + NHTATH
Sbjct: 529 PNK-----------QNLHR-------ISVKEGVLKTGDTVKLAVDKVKRRETIKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 571 LLHRALKDTLGEHVNQAGSLV 591
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKK 55
+L+TI AK +V+ G ++LYDT+GFPV+LT+ E+ GL VD +E K+
Sbjct: 371 ILETILKTAKETNEQVIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKE 428
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 281 LRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
L N VD V++G EA ++ ++ FYAE GGQ+ D+G + ++
Sbjct: 474 LIQNDTLVDEVAAGNEAQVIFKETPFYAESGGQVADKGTIESE 516
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 200 LVSSCGFIGSDTGLGDLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQ 259
L F+G ++ T+H + L N VD V++G EA ++ ++ FYAE
Sbjct: 453 LTEKSAFVGYNS-------TEHVSEI--LYLIQNDTLVDEVAAGNEAQVIFKETPFYAES 503
Query: 260 GGQIYDEG 267
GGQ+ D+G
Sbjct: 504 GGQVADKG 511
>gi|167550339|ref|ZP_02344096.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
gi|205324713|gb|EDZ12552.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Saintpaul str. SARA29]
Length = 876
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|326496549|dbj|BAJ94736.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 981
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 85/162 (52%), Gaps = 22/162 (13%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+G + N V++VS GT+ ILLD++ FYAE GGQ+ D GF+ +E + ++++
Sbjct: 559 KGLLINGSPVENVSEGTDVEILLDRTPFYAESGGQVGDNGFLYVYEEEGGKQ---NAVIE 615
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
++ +Q SL N+ K +K ++ VG K+ +D R+ ++HTA
Sbjct: 616 IKD--------VQKSLGNIFVHKGTIK-----QGSIEVGKKIDAAVDGKLRQGAKAHHTA 662
Query: 437 THILNHALRFVLGPEADQKGSLV------YRYHLHENIMECE 472
TH+L AL+ V+G E Q GSLV + + H + E E
Sbjct: 663 THLLQSALKSVIGSETSQAGSLVAFDRLRFDFSFHRPLTEKE 704
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 30/44 (68%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEG 276
N V++VS GT+ ILLD++ FYAE GGQ+ D GF+ +EG
Sbjct: 564 NGSPVENVSEGTDVEILLDRTPFYAESGGQVGDNGFLYVYEEEG 607
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQS 58
L G + LYDTYGFP+++T + E+G+++DM+ + E+ +K++Q+
Sbjct: 474 LSGKDVFLLYDTYGFPIEITAEIASERGVTIDMKGFDIEMENQRKQSQA 522
>gi|427738132|ref|YP_007057676.1| alanyl-tRNA synthetase [Rivularia sp. PCC 7116]
gi|427373173|gb|AFY57129.1| alanyl-tRNA synthetase [Rivularia sp. PCC 7116]
Length = 907
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 107/245 (43%), Gaps = 24/245 (9%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDE-GFMIGVND-----EGTVVGLRYNKQF 287
KQ +V SG +A L D F E +I E GF + V+ +G + G + Q
Sbjct: 378 KQENKTVISGDDAFTLYDTHGFPLELTQEIASEAGFTVDVDGFNKRMQGQIEGSKGAHQT 437
Query: 288 VDSVSSGTEAGILLDK-------SNF--YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGIL 338
+D G LDK + F Y E E + ++ SGTE I+
Sbjct: 438 IDLTVQGE-----LDKLAESIEVTEFVGYTESTATSKVEAILVEGISTEAAESGTEVQIV 492
Query: 339 LDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLV---NLEGSKYALPIFLQFSLSNL 395
L+ + FYAE GGQI D G++ G + S + L +Y + + ++
Sbjct: 493 LNTTPFYAESGGQIGDRGYISGETTRVRRFPTLSEVALAERLPPGRYPKGDGILIRIEDV 552
Query: 396 KKKKKL-VKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQ 454
KK+ V T+RVGD + ID A RR +NHTATH+L AL+ ++ Q
Sbjct: 553 KKESDFFVHFGRIERGTIRVGDSVTAQIDRACRRRAQANHTATHLLQAALKKIVDEGISQ 612
Query: 455 KGSLV 459
GSLV
Sbjct: 613 AGSLV 617
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 3 QTIAKLGESK--VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+ IAKL + V+ GD A+ LYDT+GFP++LTQ + E G +VD++ + K+ Q +
Sbjct: 372 EVIAKLKQENKTVISGDDAFTLYDTHGFPLELTQEIASEAGFTVDVDGF---NKRMQGQI 428
Query: 61 ESQAGMETSVEFC 73
E G +++
Sbjct: 429 EGSKGAHQTIDLT 441
>gi|420244106|ref|ZP_14747941.1| alanine--tRNA ligase [Rhizobium sp. CF080]
gi|398056094|gb|EJL48119.1| alanine--tRNA ligase [Rhizobium sp. CF080]
Length = 886
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 80/162 (49%), Gaps = 28/162 (17%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+ + + + VDS S+G + ++++++ FY E GGQ+ D G +++
Sbjct: 470 QAIVRDGKAVDSASAGEQVQVVVNQTPFYGESGGQMGDTG-----------------VIS 512
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+ +K L + + K + V + TL+VGD + L +D ARR + SNH+A
Sbjct: 513 TDNAK------LDVADAQKKGEGLFVHIATVAEGTLKVGDAVALTVDHARRSRLRSNHSA 566
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
TH+L+ ALR VLG QKGSLV L H M EE
Sbjct: 567 THLLHEALREVLGTHVAQKGSLVAPERLRFDVSHPKPMSAEE 608
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQ 63
L + +L G+ A++LYDTYGFP+DLTQ + + + VD+ + DA ++ ++E S
Sbjct: 377 LHKGDMLDGETAFKLYDTYGFPLDLTQDALRAREIGVDISGFTDAMERQKAEARSH 432
>gi|386043815|ref|YP_005962620.1| alanyl-tRNA synthetase [Listeria monocytogenes 10403S]
gi|404410805|ref|YP_006696393.1| alanyl-tRNA synthetase [Listeria monocytogenes SLCC5850]
gi|345537049|gb|AEO06489.1| alanyl-tRNA synthetase [Listeria monocytogenes 10403S]
gi|404230631|emb|CBY52035.1| alanyl-tRNA synthetase [Listeria monocytogenes SLCC5850]
Length = 879
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ N VD V++G EA ++ ++ FYAE GGQ+ D+G + ES+ L + V
Sbjct: 474 LIQNDTLVDEVAAGNEAQVIFKETPFYAESGGQVADKGTI-----ESETGLAYVEDVQKA 528
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+K NL + + L+ GD +KL +D +RR + NHTATH
Sbjct: 529 PNK-----------QNLHR-------ISVKEGVLKTGDTVKLAVDRVKRRETIKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 571 LLHRALKDTLGEHVNQAGSLV 591
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 3/58 (5%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKK 55
+L+TI AK +V+ G ++LYDT+GFPV+LT+ E+ GL VD +E K+
Sbjct: 371 ILETILKTAKETNEQVIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKE 428
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
++ L N VD V++G EA ++ ++ FYAE GGQ+ D+G + ++
Sbjct: 471 ILYLIQNDTLVDEVAAGNEAQVIFKETPFYAESGGQVADKGTIESE 516
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 200 LVSSCGFIGSDTGLGDLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQ 259
L F+G ++ T+H + L N VD V++G EA ++ ++ FYAE
Sbjct: 453 LTEKSAFVGYNS-------TEHVSEI--LYLIQNDTLVDEVAAGNEAQVIFKETPFYAES 503
Query: 260 GGQIYDEG 267
GGQ+ D+G
Sbjct: 504 GGQVADKG 511
>gi|213025001|ref|ZP_03339448.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. 404ty]
Length = 514
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 332 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 370
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 371 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 426
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 427 RQVLGTHVAQKGSLV 441
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 232 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 290
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 291 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 350
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 351 YAESGGQVGDK 361
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 332 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 367
>gi|444376503|ref|ZP_21175747.1| Alanyl-tRNA synthetase [Enterovibrio sp. AK16]
gi|443679481|gb|ELT86137.1| Alanyl-tRNA synthetase [Enterovibrio sp. AK16]
Length = 860
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 75/140 (53%), Gaps = 29/140 (20%)
Query: 325 FVDSVSSGT-----EAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEG 379
FVD ++S T EA I++D++ FYAE GGQ D GF++ D + E+ ++
Sbjct: 473 FVDGMASETLATADEAVIIMDQTPFYAESGGQCGDAGFLM--TDSGKFEV-------IDT 523
Query: 380 SKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHI 439
KY I L + KLV + L VGD ++ ++ RR+ I NH+ATH+
Sbjct: 524 QKYGAAIGL---------RGKLVDGM------LSVGDNVEAKVNAERRQAIALNHSATHL 568
Query: 440 LNHALRFVLGPEADQKGSLV 459
L+ ALR VLG QKGSLV
Sbjct: 569 LHEALRIVLGEHVQQKGSLV 588
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+ KVL G+ ++LYDTYGFP DLT + E+G ++D E +E A ++ Q + +AG
Sbjct: 385 DGKVLDGETVFKLYDTYGFPADLTNDVARERGFTIDEEGFESAMEE-QRQRAREAG 439
>gi|392564303|gb|EIW57481.1| hypothetical protein TRAVEDRAFT_21080 [Trametes versicolor
FP-101664 SS1]
Length = 978
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 74/143 (51%), Gaps = 28/143 (19%)
Query: 321 SNKQFVDSVSSGTEA---GILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
S K F+ S E G+LLD+++FYAE GGQ YD G ++ +
Sbjct: 530 SKKAFLKSTEEIPEEASFGLLLDRTSFYAESGGQEYDTGSIV-----------------I 572
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLV-KLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+G +F ++N++ V + H L +GD++ D RR P+ +NHTA
Sbjct: 573 DG-------VAEFEVTNVQVYNGYVLHIGHMKYGKLNIGDEIVSSYDELRRWPLRNNHTA 625
Query: 437 THILNHALRFVLGPEADQKGSLV 459
THILN++LR VLG DQKGSLV
Sbjct: 626 THILNYSLREVLGDHIDQKGSLV 648
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 39/56 (69%), Gaps = 2/56 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGME 67
K L G WRLYDTYGFPVDLT+LM EE GLS++ +E A +A S+ S+ G++
Sbjct: 431 KELSGKDVWRLYDTYGFPVDLTRLMAEELGLSINEAEFEAA--QAHSKEASKGGVK 484
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 61 ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGSIN 119
E+ +TS+E CGGTH+A + DF ++ E IAKG +V+ G + G
Sbjct: 730 ENPKWRKTSIELCGGTHVARTGEIKDFVVTEESGIAKGIRRVVAVTGHEAAEARRLGESL 789
Query: 120 DEMVNKYPSL 129
+N+ S+
Sbjct: 790 TAQLNRIESM 799
>gi|409080524|gb|EKM80884.1| hypothetical protein AGABI1DRAFT_112599, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 954
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 78/147 (53%), Gaps = 38/147 (25%)
Query: 322 NKQFVDSVSS----GTEAGILLDKSNFYAEQGGQIYDEGFMI--GVNDESQIELWFSSLV 375
NK FV S + GT G+LLDK++FYAE GGQ YD G ++ GV D
Sbjct: 512 NKAFVSSTENIPGYGT-FGLLLDKTSFYAEAGGQEYDTGNIVIDGVAD------------ 558
Query: 376 NLEGSKYALPIFLQFSLSNLKKKKKLVKLLHT--LSH-TLRVGDKLKLHIDTARRRPIMS 432
F ++N++ K V LHT L + TL VG+++ D RR P+ +
Sbjct: 559 --------------FEVTNVQVYKGYV--LHTGYLKYGTLEVGNEVISSYDELRRWPLRN 602
Query: 433 NHTATHILNHALRFVLGPEADQKGSLV 459
NHT THILN +LR +LG DQKGSLV
Sbjct: 603 NHTGTHILNFSLREILGDHIDQKGSLV 629
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK--KKAQSEPESQAGMETS 69
++L G WRLYDTYGFPVDLT LM EE GL ++ + +++A+ K S+ ++ G+
Sbjct: 412 QLLDGKDVWRLYDTYGFPVDLTLLMAEEMGLGINQKEFDEAQAWSKEASKGPTKKGVSDM 471
Query: 70 VEF 72
V+
Sbjct: 472 VKL 474
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 42 LSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SN 100
+S++ +V E AK + E+ +TS+EFCGGTH+A + D + E IAKG
Sbjct: 697 VSLEYDVDEIAK-----DIENPKWRQTSIEFCGGTHVARTGDIKDIVVVEESGIAKGIRR 751
Query: 101 IVSYCGSKG 109
IV+ G +
Sbjct: 752 IVAVTGQEA 760
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Query: 273 NDEGTVVGLRYNKQFVDSVSS----GTEAGILLDKSNFYAEQGGQIYDEG 318
N T+ + +NK FV S + GT G+LLDK++FYAE GGQ YD G
Sbjct: 501 NITATIKAIFHNKAFVSSTENIPGYGT-FGLLLDKTSFYAEAGGQEYDTG 549
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 14/69 (20%)
Query: 212 GLGDLSQTKHTPFVKRLRFSYNKQFVDSVSS----GTEAGILLDKSNFYAEQGGQIYDEG 267
G G+++ T F +NK FV S + GT G+LLDK++FYAE GGQ YD G
Sbjct: 498 GTGNITATIKAIF-------HNKAFVSSTENIPGYGT-FGLLLDKTSFYAEAGGQEYDTG 549
Query: 268 FMI--GVND 274
++ GV D
Sbjct: 550 NIVIDGVAD 558
>gi|289810694|ref|ZP_06541323.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Typhi str. AG3]
Length = 603
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 73/135 (54%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 467 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAG----------------------- 503
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 504 --FTFAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 561
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 562 RQVLGTHVAQKGSLV 576
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 367 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 425
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 426 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 485
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 486 YAESGGQVGDK 496
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 467 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 502
>gi|437696160|ref|ZP_20822377.1| alanyl-tRNA ligase, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
gi|435277086|gb|ELO55044.1| alanyl-tRNA ligase, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 561362 9-7]
Length = 751
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|342320045|gb|EGU11988.1| Hypothetical Protein RTG_01868 [Rhodotorula glutinis ATCC 204091]
Length = 957
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 25/147 (17%)
Query: 314 IYDEG-FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFS 372
IY +G F+++ + ++ + GI+LD++NFYAE GGQ YD G ++ + Q +
Sbjct: 509 IYRQGKFVASTEELEDAQQ-VQLGIVLDRTNFYAESGGQEYDTGRIV---IDGQADFVVE 564
Query: 373 SLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMS 432
+ G Y L I + L+VGDK+ D RR P+ +
Sbjct: 565 DVQVFNG--YVLHIG------------------RVVEGALKVGDKVVSSYDELRRWPLRN 604
Query: 433 NHTATHILNHALRFVLGPEADQKGSLV 459
NHT THILN+ LR VLG DQKGSLV
Sbjct: 605 NHTGTHILNYCLREVLGDHVDQKGSLV 631
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/40 (67%), Positives = 28/40 (70%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD 45
AK S L G WRLYDTYGFPVDLT LM EE GLS+D
Sbjct: 406 AKKEGSNTLRGADVWRLYDTYGFPVDLTLLMAEEAGLSID 445
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 57 QSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
Q++ E+ TSVEFCGGTH+ + +F I+ E IAKG I++ G
Sbjct: 709 QADIENPKWRSTSVEFCGGTHVQKTGEIKEFVITEESGIAKGIRRIIAITG 759
>gi|257465412|ref|ZP_05629783.1| alanyl-tRNA synthetase [Actinobacillus minor 202]
gi|257451072|gb|EEV25115.1| alanyl-tRNA synthetase [Actinobacillus minor 202]
Length = 874
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 72/143 (50%), Gaps = 26/143 (18%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G SN VD V SG A I+LDK+ FYAE GGQ+ D G ++
Sbjct: 471 GLFSNGNAVDVVKSGENAIIILDKTPFYAEMGGQVGDSG-----------------RIST 513
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTA 436
E F QF + + +K ++ + + + L+VGDK+ + RR I NH+A
Sbjct: 514 E--------FCQFHVVDTQKYGQVFGHIGQIEAGELKVGDKVTAEVAAERRHSIQLNHSA 565
Query: 437 THILNHALRFVLGPEADQKGSLV 459
TH+L+ ALR VLG QKGSLV
Sbjct: 566 THLLHSALREVLGTHVMQKGSLV 588
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/49 (55%), Positives = 32/49 (65%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
E TVVGL N VD V SG A I+LDK+ FYAE GGQ+ D G +S +
Sbjct: 466 EATVVGLFSNGNAVDVVKSGENAIIILDKTPFYAEMGGQVGDSGRISTE 514
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 68/147 (46%), Gaps = 16/147 (10%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG---- 65
E+ L GDVA++LYDTYGFP+DLT + E+ + +D +E A+ +AQ E +
Sbjct: 385 ENNTLSGDVAFKLYDTYGFPLDLTADVCRERNIVIDEAGFE-AEMQAQRERAKASSNFGV 443
Query: 66 -------METSVEFCGGTHL-AMAHHVGDFCI-SSEEAIAKGSNIVSYCGSKGTFQSHSG 116
++ +F G +L A A VG F ++ + + G N + + G
Sbjct: 444 DYNNVIKVDGKTDFIGYDNLTAEATVVGLFSNGNAVDVVKSGENAIIILDKTPFYAEMGG 503
Query: 117 SINDEMVNKYPSLYRLFRTVHKQKYVQ 143
+ D + + + F V QKY Q
Sbjct: 504 QVGDS--GRISTEFCQFHVVDTQKYGQ 528
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 23/35 (65%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 267
N VD V SG A I+LDK+ FYAE GGQ+ D G
Sbjct: 475 NGNAVDVVKSGENAIIILDKTPFYAEMGGQVGDSG 509
>gi|164427876|ref|XP_965697.2| alanyl-tRNA synthetase [Neurospora crassa OR74A]
gi|38567140|emb|CAE76435.1| probable alanine--tRNA ligase, cytosolic [Neurospora crassa]
gi|157071919|gb|EAA36461.2| alanyl-tRNA synthetase [Neurospora crassa OR74A]
gi|336464861|gb|EGO53101.1| hypothetical protein NEUTE1DRAFT_126487 [Neurospora tetrasperma
FGSC 2508]
Length = 961
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 74/143 (51%), Gaps = 32/143 (22%)
Query: 323 KQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI--GVNDESQIELWFSSLVNL 377
K+F+ S + + T G+LLD +NFYAE GGQ+ D G +I GV + F L
Sbjct: 510 KEFLKSSKDLPAKTPLGLLLDNTNFYAESGGQVADTGRIIIDGVAE-------FKVLDVQ 562
Query: 378 EGSKYALPI-FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
E Y + FL++ L GD++ D RR+PI +NHT
Sbjct: 563 EYGGYIVHNGFLEYG-------------------ELTEGDEVVCEYDELRRQPIRNNHTG 603
Query: 437 THILNHALRFVLGPEADQKGSLV 459
THILNH+LR VLG E +QKGSLV
Sbjct: 604 THILNHSLREVLGDEINQKGSLV 626
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGM 66
K GE K+ DV WRLYDT+GFP DLT+LM EE+GL++D +A++KA+ S+A
Sbjct: 406 KSGEKKLSGADV-WRLYDTFGFPEDLTKLMAEERGLTIDEAEVNEAREKARE--ASKAVK 462
Query: 67 ETSVEFC 73
E EF
Sbjct: 463 EAVQEFA 469
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 15/107 (14%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + +S+ MEV E K P++ + SVEFCGGTH+
Sbjct: 685 ETYPNPVRV---------VSIGMEVDELLKN-----PKNPEWRKISVEFCGGTHVENTGL 730
Query: 84 VGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGSINDEMVNKYPSL 129
+ D I E IAKG IV+Y G + +E +N +L
Sbjct: 731 IKDLIIVEESGIAKGIRRIVAYTGEGAHQAQREAQVFNEKLNHINAL 777
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 234 KQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
K+F+ S + + T G+LLD +NFYAE GGQ+ D G +I
Sbjct: 510 KEFLKSSKDLPAKTPLGLLLDNTNFYAESGGQVADTGRII 549
>gi|418488215|ref|ZP_13056079.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366069940|gb|EHN34058.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
Length = 748
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|258511993|ref|YP_003185427.1| alanyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257478719|gb|ACV59038.1| alanyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 879
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 23/142 (16%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G + VD ++ G E ++LD + FYAE GGQ+ D G ++G N ++++ +++
Sbjct: 470 GLFQDGDRVDGLAIGEEGQVILDVTPFYAESGGQVGDRGEIVGANGKAEV-------LDV 522
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
+ + + + V + + +L GD ++ H+D RR I+ NHTAT
Sbjct: 523 QKAPHG----------------QHVMRVRVVDGSLLQGDSVRAHVDEDFRRDIVKNHTAT 566
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H+L+ ALR VLG Q GSLV
Sbjct: 567 HLLHKALRDVLGTHVAQAGSLV 588
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 2 LQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQ 57
++ + GE+ VL G+ A+RLYDTYGFP+DLT + EKG++VD E + E+ + +A+
Sbjct: 373 IEEVKARGET-VLSGEAAFRLYDTYGFPIDLTVEIAREKGIAVDREGFERELEEQRARAR 431
Query: 58 SEPESQAGMET 68
+ GM++
Sbjct: 432 EARQVAEGMQS 442
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLR 282
VD ++ G E ++LD + FYAE GGQ+ D G ++G N + V+ ++
Sbjct: 478 VDGLAIGEEGQVILDVTPFYAESGGQVGDRGEIVGANGKAEVLDVQ 523
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 28/44 (63%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+ T++GL + VD ++ G E ++LD + FYAE GGQ+ D G
Sbjct: 465 DATIIGLFQDGDRVDGLAIGEEGQVILDVTPFYAESGGQVGDRG 508
>gi|350296965|gb|EGZ77942.1| cytosolic probable alanine--tRNA ligase [Neurospora tetrasperma
FGSC 2509]
Length = 961
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/143 (39%), Positives = 74/143 (51%), Gaps = 32/143 (22%)
Query: 323 KQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI--GVNDESQIELWFSSLVNL 377
K+F+ S + + T G+LLD +NFYAE GGQ+ D G +I GV + F L
Sbjct: 510 KEFLKSSKDLPAKTPLGLLLDNTNFYAESGGQVADTGRIIIDGVAE-------FKVLDVQ 562
Query: 378 EGSKYALPI-FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
E Y + FL++ L GD++ D RR+PI +NHT
Sbjct: 563 EYGGYIVHNGFLEYG-------------------ELTEGDEVVCEYDELRRQPIRNNHTG 603
Query: 437 THILNHALRFVLGPEADQKGSLV 459
THILNH+LR VLG E +QKGSLV
Sbjct: 604 THILNHSLREVLGDEINQKGSLV 626
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 44/67 (65%), Gaps = 3/67 (4%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGM 66
K GE K+ DV WRLYDT+GFP DLT+LM EE+GL++D +A++KA+ S+A
Sbjct: 406 KSGEKKLSGADV-WRLYDTFGFPEDLTKLMAEERGLTIDEAEVNEAREKARE--ASKAVK 462
Query: 67 ETSVEFC 73
E EF
Sbjct: 463 EAVQEFA 469
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 15/107 (14%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + +S+ MEV E K P++ + SVEFCGGTH+
Sbjct: 685 ETYPNPVRV---------VSIGMEVDELLKN-----PKNPEWRKISVEFCGGTHVENTGL 730
Query: 84 VGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGSINDEMVNKYPSL 129
+ D I E IAKG IV+Y G + +E +N +L
Sbjct: 731 IKDLIIVEESGIAKGIRRIVAYTGEGAHQAQREAQVFNEKLNHINAL 777
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 234 KQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
K+F+ S + + T G+LLD +NFYAE GGQ+ D G +I
Sbjct: 510 KEFLKSSKDLPAKTPLGLLLDNTNFYAESGGQVADTGRII 549
>gi|159123802|gb|EDP48921.1| alanyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
Length = 1011
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 79/158 (50%), Gaps = 28/158 (17%)
Query: 303 KSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 362
K N AE + + F S+ + G + GI+LD++NFYAEQGGQ D G +I ++
Sbjct: 549 KGNITAEIKAIYHGKNFHSSTA---QIPDGEQIGIILDRTNFYAEQGGQENDTGRII-ID 604
Query: 363 DESQIELWFSSLVNLEGSKYALPI-FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLH 421
+++E+ L + Y L F+++ + +GD +
Sbjct: 605 GRAELEVGDVQLY----AGYVLHTGFMKYG-------------------SFSIGDAVLCE 641
Query: 422 IDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
D RR PI +NHT THILN ALR VLG +QKGSLV
Sbjct: 642 YDELRRWPIRNNHTGTHILNFALRRVLGDSVEQKGSLV 679
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 41/63 (65%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
AK+ L G WRLYDT+GFPVDLT+LM EE+GL++D +E+A+ +A+ + Q
Sbjct: 457 AKIKGDDKLHGADVWRLYDTFGFPVDLTRLMAEERGLNIDDLEFEEARLRAKEASKGQKK 516
Query: 66 MET 68
T
Sbjct: 517 SAT 519
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 240 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ G + GI+LD++NFYAEQGGQ D G +I
Sbjct: 572 IPDGEQIGIILDRTNFYAEQGGQENDTGRII 602
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 61 ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
E +E S+EFCGGTH+ + D I E IAKG I++ G
Sbjct: 761 EDPRWLEVSIEFCGGTHVQKTGDIKDLIILEENGIAKGIRRIIAVTG 807
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 291 VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+ G + GI+LD++NFYAEQGGQ D G
Sbjct: 572 IPDGEQIGIILDRTNFYAEQGGQENDTG 599
>gi|425766352|gb|EKV04967.1| Alanyl-tRNA synthetase, putative [Penicillium digitatum Pd1]
gi|425767085|gb|EKV05667.1| Alanyl-tRNA synthetase, putative [Penicillium digitatum PHI26]
Length = 958
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 68/135 (50%), Gaps = 25/135 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
D V G + G++LD +NFYAEQGGQ D G +I + Q EL + + G Y L
Sbjct: 516 TDDVPDGAQLGVILDCTNFYAEQGGQENDTGKIII---DGQAELEVGDVQSYAG--YVLH 570
Query: 386 I-FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F+++ + VGD + D RR PI +NHT THILN AL
Sbjct: 571 TGFMKYG-------------------SFAVGDSVICEYDELRRWPIRNNHTGTHILNFAL 611
Query: 445 RFVLGPEADQKGSLV 459
+ +LG DQKGSLV
Sbjct: 612 KEILGDGVDQKGSLV 626
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 46/66 (69%), Gaps = 3/66 (4%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
AK+ ++ +L G WRLYDT+GFPVDLT++M EE+GL +D +E+A+ KA+ E+ G
Sbjct: 404 AKIKDTDMLHGADVWRLYDTFGFPVDLTRIMAEERGLRIDDVEFEEARLKAK---EASKG 460
Query: 66 METSVE 71
+ + E
Sbjct: 461 QKKAAE 466
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
D V G + G++LD +NFYAEQGGQ D G +I
Sbjct: 516 TDDVPDGAQLGVILDCTNFYAEQGGQENDTGKII 549
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 15/87 (17%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + VE + E+ ++ K +P Q E S+EFCGGTH+
Sbjct: 685 ETYPDPVRVVSVGVELE------EILQNVK-----DPRWQ---EVSIEFCGGTHVQKTGD 730
Query: 84 VGDFCISSEEAIAKG-SNIVSYCGSKG 109
+ D I E IAKG I++ G +
Sbjct: 731 IKDLVILEENGIAKGIRRIIAVTGEEA 757
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 288 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
D V G + G++LD +NFYAEQGGQ D G
Sbjct: 516 TDDVPDGAQLGVILDCTNFYAEQGGQENDTG 546
>gi|367043852|ref|XP_003652306.1| hypothetical protein THITE_2113640 [Thielavia terrestris NRRL 8126]
gi|346999568|gb|AEO65970.1| hypothetical protein THITE_2113640 [Thielavia terrestris NRRL 8126]
Length = 959
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/130 (40%), Positives = 67/130 (51%), Gaps = 29/130 (22%)
Query: 333 TEAGILLDKSNFYAEQGGQIYDEGFMI--GVNDESQIELWFSSLVNLEGSKYALPI-FLQ 389
T G+LLDK+NFYAE GGQ+ D G ++ GV + F L E Y + +L+
Sbjct: 521 TPLGVLLDKTNFYAESGGQVADTGRILIDGVAE-------FKVLDVQEYGGYIVHNGYLE 573
Query: 390 FSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLG 449
+ L GD++ D RR+PI +NHT THILNHALR VLG
Sbjct: 574 YG-------------------ELTAGDEVICEYDELRRQPIRNNHTGTHILNHALREVLG 614
Query: 450 PEADQKGSLV 459
E QKGSLV
Sbjct: 615 DEVHQKGSLV 624
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
K G +K+ DV WRLYDT+GFP DLT+LM EE+GL++D E A++KA+
Sbjct: 404 KAGNNKLSGADV-WRLYDTFGFPEDLTKLMAEERGLTIDEAEVEVAREKAR 453
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 60 PESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGS 107
P++ + SVEFCGGTH+ + D I E IAKG IV+Y G
Sbjct: 705 PKNPEWRKISVEFCGGTHVDATGIIKDLIIIEESGIAKGIRRIVAYTGD 753
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 244 TEAGILLDKSNFYAEQGGQIYDEGFMI 270
T G+LLDK+NFYAE GGQ+ D G ++
Sbjct: 521 TPLGVLLDKTNFYAESGGQVADTGRIL 547
>gi|422412992|ref|ZP_16489951.1| alanyl-tRNA synthetase, partial [Listeria innocua FSL S4-378]
gi|313618845|gb|EFR90725.1| alanyl-tRNA synthetase [Listeria innocua FSL S4-378]
Length = 533
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + VD V+SG+EA ++ ++ FYAE GGQ+ D+G + ES+
Sbjct: 128 LIQDDTLVDEVASGSEAQVIFKETPFYAESGGQVADKGTI-----ESET----------- 171
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G Y + + NL + + L+ GD +KL +D +RR + NHTATH
Sbjct: 172 GVAYVEDVQKAPNKQNLHR-------ISVKEGVLKTGDTVKLAVDKVKRRETIKNHTATH 224
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 225 LLHRALKDTLGEHVNQAGSLV 245
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 73/166 (43%), Gaps = 32/166 (19%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD-------MEVYE 50
+L+TI AK + + G ++LYDT+GFPV+LT+ E+ GL VD M+
Sbjct: 25 ILETILKNAKETNEQTIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKEQR 84
Query: 51 DAKKKAQSEPESQ-------AGMETSVEFCG---GTHLA-MAHHVGDFCISSEEAIAKGS 99
D + A+++ +S A + EF G H++ + + + D + E A +
Sbjct: 85 DRARSARADVKSMQVQGELLANLTDKSEFVGYNTTEHVSEILYLIQDDTLVDEVASGSEA 144
Query: 100 NIV-----------SYCGSKGTFQSHSGSINDEMVNKYPSLYRLFR 134
++ KGT +S +G E V K P+ L R
Sbjct: 145 QVIFKETPFYAESGGQVADKGTIESETGVAYVEDVQKAPNKQNLHR 190
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 200 LVSSCGFIGSDTGLGDLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQ 259
L F+G +T T+H + L + VD V+SG+EA ++ ++ FYAE
Sbjct: 107 LTDKSEFVGYNT-------TEHVSEI--LYLIQDDTLVDEVASGSEAQVIFKETPFYAES 157
Query: 260 GGQIYDEGFM 269
GGQ+ D+G +
Sbjct: 158 GGQVADKGTI 167
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 287 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
VD V+SG+EA ++ ++ FYAE GGQ+ D+G + ++
Sbjct: 134 LVDEVASGSEAQVIFKETPFYAESGGQVADKGTIESE 170
>gi|254415207|ref|ZP_05028969.1| alanyl-tRNA synthetase [Coleofasciculus chthonoplastes PCC 7420]
gi|196178013|gb|EDX73015.1| alanyl-tRNA synthetase [Coleofasciculus chthonoplastes PCC 7420]
Length = 877
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 24/142 (16%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
++ + V+S +GTE ++LD++ FYAE GGQI D G++ G N +V +
Sbjct: 470 ALVAEGESVESAQTGTEVQVVLDQTPFYAESGGQIGDRGYLSGDN----------LVVRI 519
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
+ K F+ F TL +GD + ID A RR +NHTAT
Sbjct: 520 DDVKKESDFFVHFG--------------RVERGTLNLGDTVTAQIDRACRRRAQANHTAT 565
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H+L AL+ ++ P Q GSLV
Sbjct: 566 HLLQAALKKIVDPSISQAGSLV 587
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/55 (50%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMET 68
+ G A+ LYDT+GFP++LTQ + EE GL+VD+ YE A K+ Q SQA ET
Sbjct: 383 ISGRDAFTLYDTHGFPLELTQEIAEEHGLTVDIAGYEAAMKEQQE--NSQAAHET 435
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFV 326
V+ L + V+S +GTE ++LD++ FYAE GGQI D G++S V
Sbjct: 468 VMALVAEGESVESAQTGTEVQVVLDQTPFYAESGGQIGDRGYLSGDNLV 516
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
V+S +GTE ++LD++ FYAE GGQI D G++ G N
Sbjct: 478 VESAQTGTEVQVVLDQTPFYAESGGQIGDRGYLSGDN 514
>gi|416550929|ref|ZP_11756255.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363567994|gb|EHL51990.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
Length = 876
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 26/137 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+ V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 478 KVVEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT 518
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F++ + +K + + + LS L+VGD ++ +D ARR I NH+ATH+++
Sbjct: 519 ------FAVDDTQKYGQAIGHIGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHA 572
Query: 443 ALRFVLGPEADQKGSLV 459
ALR VLG QKGSLV
Sbjct: 573 ALRQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKVVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + V+++++G EA ++LD++ FYAE GGQ+ D+G + F +V +
Sbjct: 468 GKVTALFVDGKVVEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAGFTFAVDDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 29/38 (76%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
+ V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 478 KVVEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|315282412|ref|ZP_07870831.1| alanyl-tRNA synthetase, partial [Listeria marthii FSL S4-120]
gi|313613946|gb|EFR87671.1| alanyl-tRNA synthetase [Listeria marthii FSL S4-120]
Length = 864
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 71/141 (50%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ N VD V++G EA ++ ++ FYAE GGQ+ D+G + ES+ L + V
Sbjct: 459 LIQNDTLVDEVAAGEEAQVIFKETPFYAESGGQVADKGTI-----ESETGLAYVEDVQKA 513
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+K NL + + L+ GD +KL +D +RR + NHTATH
Sbjct: 514 PNK-----------QNLHR-------ISVKEGVLKTGDTVKLAVDKVKRRETIKNHTATH 555
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 556 LLHRALKDTLGEHVNQAGSLV 576
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 76/171 (44%), Gaps = 32/171 (18%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD-------MEVYE 50
+L+TI AK +V+ G ++LYDT+GFPV+LT+ E+ GL VD M+
Sbjct: 356 ILETILKNAKETNEQVIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKEQR 415
Query: 51 DAKKKAQSEPESQ-------AGMETSVEFCGGT---------HLAMAHHVGDFCISSEEA 94
D + A+++ +S A + EF G +L + D + EEA
Sbjct: 416 DRARSARADVKSMQVQGELLANLTEKSEFVGYNTTEHVSEILYLIQNDTLVDEVAAGEEA 475
Query: 95 --IAKGSNIVSYCG----SKGTFQSHSGSINDEMVNKYPSLYRLFRTVHKQ 139
I K + + G KGT +S +G E V K P+ L R K+
Sbjct: 476 QVIFKETPFYAESGGQVADKGTIESETGLAYVEDVQKAPNKQNLHRISVKE 526
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 9/68 (13%)
Query: 200 LVSSCGFIGSDTGLGDLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQ 259
L F+G +T T+H + L N VD V++G EA ++ ++ FYAE
Sbjct: 438 LTEKSEFVGYNT-------TEHVSEI--LYLIQNDTLVDEVAAGEEAQVIFKETPFYAES 488
Query: 260 GGQIYDEG 267
GGQ+ D+G
Sbjct: 489 GGQVADKG 496
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 28/43 (65%)
Query: 281 LRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
L N VD V++G EA ++ ++ FYAE GGQ+ D+G + ++
Sbjct: 459 LIQNDTLVDEVAAGEEAQVIFKETPFYAESGGQVADKGTIESE 501
>gi|375002546|ref|ZP_09726886.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|353077234|gb|EHB42994.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
Length = 784
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 388 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 426
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 427 ----FAVDDTQKYGQAIGHIGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 482
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 483 RQVLGTHVAQKGSLV 497
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 288 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 346
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 347 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 406
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 407 YAESGGQVGDK 417
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + V+++++G EA ++LD++ FYAE GGQ+ D+G + F +V +
Sbjct: 376 GKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAGFTFAVDDTQKY 435
Query: 336 G 336
G
Sbjct: 436 G 436
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 388 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 423
>gi|428212854|ref|YP_007085998.1| alanyl-tRNA synthetase [Oscillatoria acuminata PCC 6304]
gi|428001235|gb|AFY82078.1| alanyl-tRNA synthetase [Oscillatoria acuminata PCC 6304]
Length = 876
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 66/134 (49%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+S +SG I+LDK+ FYAE GGQI D GF+ G + SLV +E K
Sbjct: 478 VESATSGDRVQIVLDKTPFYAESGGQIGDRGFLSGQD----------SLVRIEEVKKESD 527
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
F+ F ++ VGD++ ID A RR +NHTATH+L AL+
Sbjct: 528 FFVHFG--------------RIERGSIAVGDRITAQIDRACRRRAQANHTATHLLQAALK 573
Query: 446 FVLGPEADQKGSLV 459
++ Q GSLV
Sbjct: 574 LLVDEGISQAGSLV 587
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 61/117 (52%), Gaps = 3/117 (2%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVE 71
K +PG A+ LYDTYGFP++LTQ +VEE+G++V++ +E A ++ + SQA ET
Sbjct: 381 KEIPGRDAFVLYDTYGFPLELTQEIVEERGITVELPGFEAAMEEQRV--RSQAAHETIDL 438
Query: 72 FCGGTHLAMAHHV-GDFCISSEEAIAKGSNIVSYCGSKGTFQSHSGSINDEMVNKYP 127
G+ +A H+ G + E + V G + SG +++K P
Sbjct: 439 TVQGSLDKLAEHIRGTEFLGYSEPVTTSEVTVILMGGNSVESATSGDRVQIVLDKTP 495
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 25/35 (71%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
V+S +SG I+LDK+ FYAE GGQI D GF+ G
Sbjct: 478 VESATSGDRVQIVLDKTPFYAESGGQIGDRGFLSG 512
>gi|402305108|ref|ZP_10824167.1| alanine--tRNA ligase [Haemophilus sputorum HK 2154]
gi|400376221|gb|EJP29108.1| alanine--tRNA ligase [Haemophilus sputorum HK 2154]
Length = 874
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 26/143 (18%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
SN + V+ + SG A ++LD++ FY E GGQ+ D G + S + N
Sbjct: 471 ALFSNGESVNEIKSGENAVVILDQTTFYGESGGQVGDSGLI------------SSEICN- 517
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTA 436
F +++ +K ++ + L S +L+VGDK+K ++ RR I NH+A
Sbjct: 518 ------------FQVNDTQKYGQVFGHIGQLTSGSLKVGDKVKAEVEAQRRHAITLNHSA 565
Query: 437 THILNHALRFVLGPEADQKGSLV 459
TH+L+ ALR VLG QKGSLV
Sbjct: 566 THLLHSALREVLGNHVAQKGSLV 588
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 35/46 (76%), Gaps = 1/46 (2%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
L G+VA++LYDTYGFP+DLT + E+ +++D + +E A+ +AQ E
Sbjct: 389 LSGEVAFKLYDTYGFPLDLTADVCRERNIAIDEKGFE-AEMQAQRE 433
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
+N + TVV L N + V+ + SG A ++LD++ FY E GGQ+ D G +S++
Sbjct: 463 LNTDATVVALFSNGESVNEIKSGENAVVILDQTTFYGESGGQVGDSGLISSE 514
>gi|443919032|gb|ELU39327.1| alanyl-tRNA synthetase [Rhizoctonia solani AG-1 IA]
Length = 939
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 77/144 (53%), Gaps = 27/144 (18%)
Query: 319 FMSNKQFVDSVSSGTEA--GILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+ K+F+DS+SS + GILLDK+ YAE GGQ YD G +I
Sbjct: 516 YHPTKKFIDSLSSESSESFGILLDKTCMYAESGGQEYDTGSII----------------- 558
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHT 435
++G +F++ N++ V T+ + L+VGDK+ D RR P+ +NHT
Sbjct: 559 IDG-------VAEFAVENVQVFNGYVLHTGTMKYGELKVGDKVVASYDELRRWPLRNNHT 611
Query: 436 ATHILNHALRFVLGPEADQKGSLV 459
ATHILN +LR LG DQKGSLV
Sbjct: 612 ATHILNWSLRDALGDHIDQKGSLV 635
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 28/40 (70%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
+K L G WRLYDTYGFPVDLT+LM EE GL V +E
Sbjct: 418 AKELNGRDVWRLYDTYGFPVDLTRLMAEELGLGVSDAEFE 457
>gi|429094301|ref|ZP_19156848.1| Alanyl-tRNA synthetase [Cronobacter dublinensis 1210]
gi|426740683|emb|CCJ82961.1| Alanyl-tRNA synthetase [Cronobacter dublinensis 1210]
Length = 839
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD V++G +A ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 444 VDQVTAGQQAVVVLDETPFYAESGGQVGDKG-------------------ELKGNGFT-- 482
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
FS+++ +K + + + L S L+VG+ +K +D ARR I NH+ATH+++ AL
Sbjct: 483 ----FSVNDTQKYGQAIGHIGELASGVLKVGEGVKAEVDHARRDRIRLNHSATHLMHAAL 538
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 539 RQVLGTHVAQKGSLV 553
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 344 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 402
Query: 63 QAG 65
+G
Sbjct: 403 SSG 405
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAG 336
V L + + VD V++G +A ++LD++ FYAE GGQ+ D+G + F SV+ + G
Sbjct: 434 VTALFIDGKAVDQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFSVNDTQKYG 492
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 29/44 (65%), Gaps = 6/44 (13%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDE------GFMIGVND 274
VD V++G +A ++LD++ FYAE GGQ+ D+ GF VND
Sbjct: 444 VDQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFSVND 487
>gi|336262950|ref|XP_003346257.1| hypothetical protein SMAC_05794 [Sordaria macrospora k-hell]
gi|380093586|emb|CCC08550.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 961
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 77/153 (50%), Gaps = 32/153 (20%)
Query: 319 FMSNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI--GVNDESQIELW-FS 372
+ K+F+ S + T G+LLD +NFYAE GGQ+ D G +I GV + +++ F
Sbjct: 506 IFNGKEFLKSSKDLPPKTPLGLLLDNTNFYAESGGQVADTGRIIIDGVAEFKVLDVQEFG 565
Query: 373 SLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMS 432
+ G F+++ L GD++ D RR+PI +
Sbjct: 566 GYIVHNG-------FIEYG-------------------ELTEGDEVTCEYDELRRQPIRN 599
Query: 433 NHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
NHT THILNH+LR VLG E +QKGSLV + L
Sbjct: 600 NHTGTHILNHSLREVLGDEINQKGSLVDQDRLR 632
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%), Gaps = 3/67 (4%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGM 66
K G+ K+ DV WRLYDT+GFP DLT+LM EE+GL++D +A++KA+ S+A
Sbjct: 406 KSGKKKLSGADV-WRLYDTFGFPEDLTKLMAEERGLTIDEAEVNEAREKARE--ASKAVK 462
Query: 67 ETSVEFC 73
E+ EF
Sbjct: 463 ESVQEFA 469
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 16/92 (17%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + +S+ MEV E K P++ + SVEFCGGTH+
Sbjct: 685 ETYPNPVRV---------VSIGMEVDELLKN-----PKNPEWRKISVEFCGGTHVENTGL 730
Query: 84 VGDFCISSEEAIAKG-SNIVSYCGSKGTFQSH 114
+ D I E IAKG IV+Y G +G Q+
Sbjct: 731 IKDLIIVEESGIAKGIRRIVAYTG-EGAHQAQ 761
>gi|423141317|ref|ZP_17128955.1| alanyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
gi|379050489|gb|EHY68381.1| alanyl-tRNA synthetase [Salmonella enterica subsp. houtenae str.
ATCC BAA-1581]
Length = 876
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++ +G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAIDAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHLGKLSAGALQVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGAHVAQKGSLV 589
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARD 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAIDAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++ +G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAIDAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|158337563|ref|YP_001518738.1| alanyl-tRNA synthetase [Acaryochloris marina MBIC11017]
gi|205829961|sp|B0CFX4.1|SYA_ACAM1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|158307804|gb|ABW29421.1| alanyl-tRNA synthetase [Acaryochloris marina MBIC11017]
Length = 873
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 28/206 (13%)
Query: 257 AEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEA-GILLDKSNF--YAEQGGQ 313
AEQG + ++GF + ++ G +K +V S E + ++F Y + +
Sbjct: 404 AEQGLTVDEDGFAKAMKEQQDR-GRSAHKTIDLTVQSALEQLAATVHPTDFLGYTDFSAK 462
Query: 314 IYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSS 373
+ + VD S+G+E I LD++ FYAE GGQI D G++ G +
Sbjct: 463 AKVAALLVKGETVDQASAGSEVQIALDQTPFYAESGGQIGDRGYLNGKD----------V 512
Query: 374 LVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSN 433
+V +E + IF+ + TL VGDKL ID A RR + ++
Sbjct: 513 VVRIEDVQKESDIFIHYG--------------RIERGTLEVGDKLTAQIDLACRRQVQAH 558
Query: 434 HTATHILNHALRFVLGPEADQKGSLV 459
HTATH+L AL+ ++ Q GSLV
Sbjct: 559 HTATHLLQAALKNIVDESIGQAGSLV 584
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+ K + G A+ LYDTYGFP++LTQ + E+GL+VD + + A K+ Q
Sbjct: 376 KPKQISGKDAFDLYDTYGFPLELTQEIAAEQGLTVDEDGFAKAMKEQQ 423
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VD S+G+E I LD++ FYAE GGQI D G++ G
Sbjct: 475 VDQASAGSEVQIALDQTPFYAESGGQIGDRGYLNG 509
>gi|428205107|ref|YP_007089460.1| alanyl-tRNA synthetase [Chroococcidiopsis thermalis PCC 7203]
gi|428007028|gb|AFY85591.1| alanyl-tRNA synthetase [Chroococcidiopsis thermalis PCC 7203]
Length = 882
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 66/136 (48%), Gaps = 24/136 (17%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q V+ +G + I+LDK+ FYAE GGQI D G++ G + LV +E K
Sbjct: 482 QCVEEAEAGQDVQIVLDKTPFYAESGGQIGDRGYLSG----------DAILVRIEDVKKE 531
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
F+ F TLRVGDK+ ID A RR +NH+ATH+L A
Sbjct: 532 SDFFVHFG--------------RIERGTLRVGDKVTAQIDRACRRRAQANHSATHLLQAA 577
Query: 444 LRFVLGPEADQKGSLV 459
L+ ++ Q GSLV
Sbjct: 578 LKKIVDDSISQAGSLV 593
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 51/81 (62%), Gaps = 4/81 (4%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE-DAKKKAQSEPESQ 63
IAK + + G+ A+ LYDTYGFP++LTQ + EE L+VD++ +E + +K+ + E+
Sbjct: 380 IAKQQKQTQISGESAFTLYDTYGFPLELTQEVAEEYNLTVDVDSFEVEMEKQRERAKEAH 439
Query: 64 AGMETSVEFCGGTHLAMAHHV 84
++ +V+ G+ +A H+
Sbjct: 440 ETIDLTVQ---GSLDKLAEHI 457
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 286 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
Q V+ +G + I+LDK+ FYAE GGQI D G++S
Sbjct: 482 QCVEEAEAGQDVQIVLDKTPFYAESGGQIGDRGYLS 517
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
Q V+ +G + I+LDK+ FYAE GGQI D G++ G
Sbjct: 482 QCVEEAEAGQDVQIVLDKTPFYAESGGQIGDRGYLSG 518
>gi|384135853|ref|YP_005518567.1| alanyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339289938|gb|AEJ44048.1| alanyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 879
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 23/142 (16%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G + VD ++ G E ++LD + FYAE GGQ+ D G ++G N ++++ +++
Sbjct: 470 GIFKDGDRVDGLAIGEEGQVILDVTPFYAESGGQVGDRGEIVGTNGKAEV-------LDV 522
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
+ + + + V + + +L GD ++ H+D RR I+ NHTAT
Sbjct: 523 QKAPHG----------------QHVMRVRVVDGSLLQGDSVRAHVDEDFRRDIVKNHTAT 566
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H+L+ ALR VLG Q GSLV
Sbjct: 567 HLLHKALRDVLGTHVAQAGSLV 588
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 46/71 (64%), Gaps = 5/71 (7%)
Query: 2 LQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQ 57
++ + GE+ VL G+ A+RLYDTYGFP+DLT + EKG++VD E + E+ + +A+
Sbjct: 373 IEEVKARGET-VLSGEAAFRLYDTYGFPIDLTVEIAREKGIAVDREGFERELEEQRARAR 431
Query: 58 SEPESQAGMET 68
+ GM++
Sbjct: 432 EARQVAEGMQS 442
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
VD ++ G E ++LD + FYAE GGQ+ D G ++G N + V+
Sbjct: 478 VDGLAIGEEGQVILDVTPFYAESGGQVGDRGEIVGTNGKAEVL 520
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+ T++G+ + VD ++ G E ++LD + FYAE GGQ+ D G
Sbjct: 465 DATILGIFKDGDRVDGLAIGEEGQVILDVTPFYAESGGQVGDRG 508
>gi|378732975|gb|EHY59434.1| alanyl-tRNA synthetase [Exophiala dermatitidis NIH/UT8656]
Length = 1107
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 70/132 (53%), Gaps = 23/132 (17%)
Query: 328 SVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIF 387
+V G + G++LDK+NFYAEQGGQ YD G ++ ++ ++++E+ + ++
Sbjct: 665 NVPEGEQVGLILDKTNFYAEQGGQEYDTGRIV-IDGQAELEV------------ENVQVY 711
Query: 388 LQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFV 447
+ L +K H GD D RR PI +NHT THILN ALR V
Sbjct: 712 AGYVLHT-----GYMKYGH-----FSTGDVAICEYDELRRWPIRNNHTGTHILNFALREV 761
Query: 448 LGPEADQKGSLV 459
LG DQKGSLV
Sbjct: 762 LGDGIDQKGSLV 773
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 36/46 (78%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
K L G WRLYDT+GFPVDLT+LM EE+GLS+D +E+A+ KA+
Sbjct: 557 KKLHGADVWRLYDTFGFPVDLTRLMAEERGLSIDDNEFEEARLKAR 602
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 273 NDEGTVVGLRYNKQF---VDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
N G + + + K+F +V G + G++LDK+NFYAEQGGQ YD G
Sbjct: 645 NINGKIQAIYHAKKFHEDTRNVPEGEQVGLILDKTNFYAEQGGQEYDTG 693
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 239 SVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+V G + G++LDK+NFYAEQGGQ YD G ++
Sbjct: 665 NVPEGEQVGLILDKTNFYAEQGGQEYDTGRIV 696
>gi|328858383|gb|EGG07496.1| hypothetical protein MELLADRAFT_48072 [Melampsora larici-populina
98AG31]
Length = 966
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 69/132 (52%), Gaps = 25/132 (18%)
Query: 329 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFL 388
+ SG G++LDK+NFYAEQGGQ D G +I +EG +
Sbjct: 529 LKSGEPFGVILDKTNFYAEQGGQENDTGTLI-----------------IEGE-------M 564
Query: 389 QFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFV 447
F + +++ V + LS ++ D ++ D RR+PI +NHT THILN+ALR
Sbjct: 565 IFDVEDVQVFNGYVLHIGNLSEGEIKKEDLVQSSFDELRRKPIKNNHTGTHILNYALRET 624
Query: 448 LGPEADQKGSLV 459
LG DQKGSLV
Sbjct: 625 LGDHIDQKGSLV 636
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
K KVL G W+LYDT+GFP+DLT LM EE G+ +D + +E A+ +++
Sbjct: 413 VKKNNGKVLDGKEVWKLYDTFGFPIDLTLLMAEEAGIGIDQDGFEIAQSESK 464
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 240 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ SG G++LDK+NFYAEQGGQ D G +I
Sbjct: 529 LKSGEPFGVILDKTNFYAEQGGQENDTGTLI 559
>gi|421886006|ref|ZP_16317187.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
gi|379984321|emb|CCF89460.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Senftenberg str. SS209]
Length = 876
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHIGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + V+++++G EA ++LD++ FYAE GGQ+ D+G + F +V +
Sbjct: 468 GKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAGFTFAVDDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|58268868|ref|XP_571590.1| alanine-tRNA ligase [Cryptococcus neoformans var. neoformans JEC21]
gi|134113024|ref|XP_774788.1| hypothetical protein CNBF2180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257434|gb|EAL20141.1| hypothetical protein CNBF2180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227825|gb|AAW44283.1| alanine-tRNA ligase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1012
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 72/140 (51%), Gaps = 28/140 (20%)
Query: 324 QFVDSVS---SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+F++S S T GILLD++NFYAE GGQ YD G ++ ++G
Sbjct: 567 KFLNSTSELPPNTTFGILLDRTNFYAESGGQEYDTG-----------------VIAIDGK 609
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHI 439
+F + +++ V + + + +GD++ D RR PI +NHT THI
Sbjct: 610 A-------EFKVEDVQVYNGYVLHIGRMEEGDIEIGDEVICTYDELRRWPIRNNHTGTHI 662
Query: 440 LNHALRFVLGPEADQKGSLV 459
LN ALR VLG DQKGSLV
Sbjct: 663 LNFALREVLGDHIDQKGSLV 682
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
VL G WRLYDTYGFPVDLTQ+M EE+GL +D E +E A+
Sbjct: 466 VLSGKDIWRLYDTYGFPVDLTQIMAEERGLKIDQEAFEKAR 506
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 61 ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
E +TS+EFCGGTH+A + DF I E +IAKG IV+ G
Sbjct: 764 EDSKWRQTSIEFCGGTHVAKTDDIKDFVIIEESSIAKGIRRIVAVTG 810
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 232 YNKQFVDSVS---SGTEAGILLDKSNFYAEQGGQIYDEGFM 269
+ +F++S S T GILLD++NFYAE GGQ YD G +
Sbjct: 564 HGSKFLNSTSELPPNTTFGILLDRTNFYAESGGQEYDTGVI 604
>gi|416509053|ref|ZP_11736370.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416515259|ref|ZP_11738523.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416530102|ref|ZP_11744718.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416537195|ref|ZP_11748811.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416562796|ref|ZP_11762432.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416572900|ref|ZP_11767484.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|363551522|gb|EHL35839.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363551876|gb|EHL36188.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363563887|gb|EHL47953.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363564239|gb|EHL48296.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363572267|gb|EHL56159.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|363572574|gb|EHL56465.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
Length = 876
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHIGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + V+++++G EA ++LD++ FYAE GGQ+ D+G + F +V +
Sbjct: 468 GKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAGFTFAVDDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|56414779|ref|YP_151854.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197363707|ref|YP_002143344.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|59798481|sp|Q5PF17.1|SYA_SALPA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|56129036|gb|AAV78542.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197095184|emb|CAR60735.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
Length = 876
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHIGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEVGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + V+++++G EA ++LD++ FYAE GGQ+ D+G + F +V +
Sbjct: 468 GKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAGFTFAVDDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|168235854|ref|ZP_02660912.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
gi|194737652|ref|YP_002115779.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194713154|gb|ACF92375.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|197290777|gb|EDY30131.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. SL480]
Length = 876
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHIGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + V+++++G EA ++LD++ FYAE GGQ+ D+G + F +V +
Sbjct: 468 GKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAGFTFAVDDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|59798539|sp|Q6LMU3.2|SYA_PHOPR RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 873
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 69/135 (51%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL-EGSKYAL 384
VDS+ +G +A I+LD + FYAE GGQ D G + N ++ N+ + K+
Sbjct: 478 VDSILAGEDALIILDNTPFYAESGGQCGDAGVLTAEN----------TVFNVSDTQKFGA 527
Query: 385 PIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
I Q SL + L VGDKL+ +D RR I NH+ATH+L+ AL
Sbjct: 528 AIGHQGSL---------------VQGALNVGDKLEAQVDVVRRTAITLNHSATHLLHSAL 572
Query: 445 RFVLGPEADQKGSLV 459
R +LG QKGSLV
Sbjct: 573 RNLLGEHVAQKGSLV 587
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------ 65
K L G+ ++LYDTYGFP DLT + E+ ++D E + +A +AQ + +AG
Sbjct: 386 KELDGETVFKLYDTYGFPADLTNDVARERDFTIDEEGFNNA-MEAQRQRAREAGKFGVDY 444
Query: 66 -----METSVEFCGGTHLAMAHHV---------GDFCISSEEAIAKGSNIVSY------C 105
++ + EFCG T A + D ++ E+A+ N Y C
Sbjct: 445 NESIKVDVNTEFCGYTGTAAQSSIVALYRDGEAVDSILAGEDALIILDNTPFYAESGGQC 504
Query: 106 GSKGTFQSHSGSINDEMVNKYPSLYRLFRTVHKQKYVQDALNV 148
G G + + N K+ + H+ VQ ALNV
Sbjct: 505 GDAGVLTAENTVFNVSDTQKFGAAIG-----HQGSLVQGALNV 542
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 47/207 (22%)
Query: 264 YDEGFMIGVNDE----------GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQ 313
Y+E + VN E ++V L + + VDS+ +G +A I+LD + FYAE GGQ
Sbjct: 444 YNESIKVDVNTEFCGYTGTAAQSSIVALYRDGEAVDSILAGEDALIILDNTPFYAESGGQ 503
Query: 314 IYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQG--GQIYDEGFMIGVNDESQIE--- 368
D G ++ + V +VS D F A G G + +G E+Q++
Sbjct: 504 CGDAGVLTAENTVFNVS---------DTQKFGAAIGHQGSLVQGALNVGDKLEAQVDVVR 554
Query: 369 ------------LWFSSLVNLEGSKYAL------PIFLQFSLSNLK--KKKKLVKLLHTL 408
L S+L NL G A P L+F SNL+ K ++L ++ +
Sbjct: 555 RTAITLNHSATHLLHSALRNLLGEHVAQKGSLVKPDALRFDFSNLEAVKPEQLREIERVV 614
Query: 409 SHTLRVG---DKLKLHIDTARRRPIMS 432
+ +R+ D + I++A+++ M+
Sbjct: 615 NEQIRLNHSIDTNIMDIESAKQKGAMA 641
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQF 287
VDS+ +G +A I+LD + FYAE GGQ D G + E TV + ++F
Sbjct: 478 VDSILAGEDALIILDNTPFYAESGGQCGDAGVLTA---ENTVFNVSDTQKF 525
>gi|417392906|ref|ZP_12155581.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
gi|353610369|gb|EHC63367.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Minnesota str. A4-603]
Length = 713
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHIGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + EAI G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEAINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + V+++++G EA ++LD++ FYAE GGQ+ D+G + F +V +
Sbjct: 468 GKVTALFVDGKAVEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAGFTFAVDDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 28/36 (77%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|405121271|gb|AFR96040.1| alanine-tRNA ligase [Cryptococcus neoformans var. grubii H99]
Length = 1012
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 72/140 (51%), Gaps = 28/140 (20%)
Query: 324 QFVDSVS---SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+F++S S T GILLD++NFYAE GGQ YD G ++ ++G
Sbjct: 567 KFLNSTSELPPNTTFGILLDRTNFYAESGGQEYDTG-----------------VIAIDGK 609
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHI 439
+F + +++ V + + + +GD++ D RR PI +NHT THI
Sbjct: 610 A-------EFKVEDVQVYNGYVLHIGRMEEGDIEIGDEVICTYDELRRWPIRNNHTGTHI 662
Query: 440 LNHALRFVLGPEADQKGSLV 459
LN ALR VLG DQKGSLV
Sbjct: 663 LNFALREVLGDHIDQKGSLV 682
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
VL G WRLYDTYGFPVDLTQ+M EE+GL +D E +E A+
Sbjct: 466 VLSGKDIWRLYDTYGFPVDLTQIMAEERGLKIDQEAFEKAR 506
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 61 ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
E +TS+EFCGGTH+A + DF I E +IAKG IV+ G
Sbjct: 764 EDSKWRQTSIEFCGGTHVAKTDDIKDFVIIEESSIAKGIRRIVAVTG 810
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 3/41 (7%)
Query: 232 YNKQFVDSVS---SGTEAGILLDKSNFYAEQGGQIYDEGFM 269
+ +F++S S T GILLD++NFYAE GGQ YD G +
Sbjct: 564 HGSKFLNSTSELPPNTTFGILLDRTNFYAESGGQEYDTGVI 604
>gi|386823227|ref|ZP_10110382.1| alanyl-tRNA synthetase [Serratia plymuthica PRI-2C]
gi|386380014|gb|EIJ20796.1| alanyl-tRNA synthetase [Serratia plymuthica PRI-2C]
Length = 875
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 77/166 (46%), Gaps = 26/166 (15%)
Query: 302 DKSNF--YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 359
D S F Y + Q + Q V+ + +G EA ++LD++ FY E GGQ+ D+G +
Sbjct: 454 DASQFSGYDREEQQATVTALFRDGQPVNEIHAGEEAVVVLDETPFYGESGGQVGDKGVLK 513
Query: 360 GVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLK 419
+ V + KY I Q LS +L+V D++
Sbjct: 514 AAG---------ADFVVSDTQKYGQAIGHQGKLSQ---------------GSLKVKDRVD 549
Query: 420 LHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
IDTARR I NH+ATH+L+ ALR LG QKGSLV +L
Sbjct: 550 AQIDTARRNRIRLNHSATHLLHAALRQTLGDHVAQKGSLVNDKYLR 595
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+GL VD +E A + +
Sbjct: 380 EELAKL-QGDTLDGEAAFRLYDTYGFPVDLTADVCRERGLKVDEAGFELAMEAQRRRARE 438
Query: 63 QAG 65
+G
Sbjct: 439 SSG 441
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
+ TV L + Q V+ + +G EA ++LD++ FY E GGQ+ D+G +
Sbjct: 467 QATVTALFRDGQPVNEIHAGEEAVVVLDETPFYGESGGQVGDKGVL 512
>gi|417384183|ref|ZP_12149632.1| Alanyl-tRNA synthetase, partial [Salmonella enterica subsp.
enterica serovar Johannesburg str. S5-703]
gi|353609650|gb|EHC62886.1| Alanyl-tRNA synthetase, partial [Salmonella enterica subsp.
enterica serovar Johannesburg str. S5-703]
Length = 215
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+++++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 45 VEAINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 83
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 84 ----FAVDDTQKYGQAIGHIGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 139
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 140 RQVLGTHVAQKGSLV 154
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 28/35 (80%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
V+++++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 45 VEAINAGQEAVVVLDQTPFYAESGGQVGDKGELKG 79
>gi|260881197|ref|ZP_05403859.2| alanine--tRNA ligase [Mitsuokella multacida DSM 20544]
gi|260849786|gb|EEX69793.1| alanine--tRNA ligase [Mitsuokella multacida DSM 20544]
Length = 871
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 23/142 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+ VD ++ G EAGI+LDK+ FYAE GGQ+ DEG ++G F + K
Sbjct: 471 KLVDEITDGEEAGIILDKTPFYAEGGGQVGDEGLLLG---------EFGRIKATNAKK-- 519
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
LP + +S +++ + L+VG+ +K+ +D ++ NHTATH+L A
Sbjct: 520 LPDGTVYHVSYVEEGQ------------LKVGETVKIEVDQEKKLASARNHTATHLLQAA 567
Query: 444 LRFVLGPEADQKGSLVYRYHLH 465
L+ V+G + +Q GS V L
Sbjct: 568 LKKVVGDQVNQAGSSVTPDRLR 589
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
Query: 215 DLSQTKHTPFVKRLRFSY---NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
D+S+ K P K + + + VD ++ G EAGI+LDK+ FYAE GGQ+ DEG ++G
Sbjct: 448 DVSKLKVDPEAKEAKVVAIWKDGKLVDEITDGEEAGIILDKTPFYAEGGGQVGDEGLLLG 507
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 32/46 (69%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
E VV + + + VD ++ G EAGI+LDK+ FYAE GGQ+ DEG +
Sbjct: 460 EAKVVAIWKDGKLVDEITDGEEAGIILDKTPFYAEGGGQVGDEGLL 505
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 30/39 (76%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA 52
LPG+V +RLYDT+GFP +LT+ ++ E GL +D E ++ A
Sbjct: 383 LPGEVGFRLYDTFGFPWELTEEILHENGLDLDKEGFDKA 421
>gi|332654244|ref|ZP_08419988.1| alanine--tRNA ligase [Ruminococcaceae bacterium D16]
gi|332517330|gb|EGJ46935.1| alanine--tRNA ligase [Ruminococcaceae bacterium D16]
Length = 890
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 109/250 (43%), Gaps = 41/250 (16%)
Query: 230 FSYNKQFVDSVSSGTEAGILLDKSNF-------YAEQGGQIYDEGFMIGVNDEGTVVGLR 282
S +K +S SG +A L D F E+ G DE DE +
Sbjct: 385 LSEHKAKGESTFSGADAFKLYDTYGFPIDLTLEMVEEQGMKLDEAEFHKQMDEQRQRARK 444
Query: 283 YNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS----NKQFVDSVSSGTEAGIL 338
+ D +G E G + ++ F I D ++ N+Q + V G EA ++
Sbjct: 445 AREALGDLGWAGVEFGKDVPETEFVGYDHTAIDDAKVVALVVENEQ-AEEVMPGVEAIVV 503
Query: 339 LDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKK 398
LDK+ FYAE GGQ+ D G ++ +G + F +++++K
Sbjct: 504 LDKTPFYAEMGGQVADHG-----------------TISADG--------VTFQVTDVQKN 538
Query: 399 KKLVKLLHTLSHT---LRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQK 455
K K +HT T L+VGD + ID RR+ +M H+ATH+L+ ALR VLG Q
Sbjct: 539 KG-GKYMHTGKLTQGVLKVGDTVSAAIDVKRRKAVMRAHSATHLLDKALRTVLGDHVHQA 597
Query: 456 GSLVYRYHLH 465
GSLV L
Sbjct: 598 GSLVEEDRLR 607
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 50/94 (53%), Gaps = 15/94 (15%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKA 56
ML GES G A++LYDTYGFP+DLT MVEE+G+ +D + ++ +++A
Sbjct: 384 MLSEHKAKGES-TFSGADAFKLYDTYGFPIDLTLEMVEEQGMKLDEAEFHKQMDEQRQRA 442
Query: 57 QSEPES-----QAGME-----TSVEFCGGTHLAM 80
+ E+ AG+E EF G H A+
Sbjct: 443 RKAREALGDLGWAGVEFGKDVPETEFVGYDHTAI 476
>gi|298253344|ref|ZP_06977136.1| alanyl-tRNA synthetase [Gardnerella vaginalis 5-1]
gi|297532739|gb|EFH71625.1| alanyl-tRNA synthetase [Gardnerella vaginalis 5-1]
Length = 894
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 71/139 (51%), Gaps = 22/139 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+ K V SVS+ I+LD++ FYAE+GGQI D+G +I +D+ I LE
Sbjct: 484 AGKGSVKSVSAPANVEIILDRTPFYAERGGQIADQGEII--SDDGAI---------LEVD 532
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
PI K +V TL VG + +ID RR + +HTATH L
Sbjct: 533 DVQRPI-----------KDLIVHSCRLTEGTLSVGAPVNTNIDQVRRAALARSHTATHTL 581
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR LGP+A Q+GS+V
Sbjct: 582 HKALREELGPQATQRGSVV 600
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
K V SVS+ I+LD++ FYAE+GGQI D+G +I +D+G ++
Sbjct: 486 KGSVKSVSAPANVEIILDRTPFYAERGGQIADQGEII--SDDGAIL 529
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 61/132 (46%), Gaps = 35/132 (26%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD----MEVYEDAKKKAQSEP----- 60
+ ++ G A+ L+DTYGFP++LT M E+G+ VD E+ + K +A+++
Sbjct: 387 DDPIVGGSDAFTLHDTYGFPIELTLEMAAEQGVKVDEAKFRELMSEQKGRARADALKKRH 446
Query: 61 --------ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYC-GSKGTF 111
+ + +E ++F G T DF + SN+++ KG+
Sbjct: 447 NVDVSVYDDIKKALEKPIDFLGYT---------DF--------SSRSNVLAIVEAGKGSV 489
Query: 112 QSHSGSINDEMV 123
+S S N E++
Sbjct: 490 KSVSAPANVEII 501
>gi|437840981|ref|ZP_20846494.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|435296799|gb|ELO73150.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
Length = 876
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ +++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEVINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + E I G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEVINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+ +++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEVINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|54310165|ref|YP_131185.1| alanyl-tRNA synthetase [Photobacterium profundum SS9]
gi|46914606|emb|CAG21383.1| putative alanyl-tRNA synthetase [Photobacterium profundum SS9]
Length = 906
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 69/135 (51%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL-EGSKYAL 384
VDS+ +G +A I+LD + FYAE GGQ D G + N ++ N+ + K+
Sbjct: 511 VDSILAGEDALIILDNTPFYAESGGQCGDAGVLTAEN----------TVFNVSDTQKFGA 560
Query: 385 PIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
I Q SL + L VGDKL+ +D RR I NH+ATH+L+ AL
Sbjct: 561 AIGHQGSL---------------VQGALNVGDKLEAQVDVVRRTAITLNHSATHLLHSAL 605
Query: 445 RFVLGPEADQKGSLV 459
R +LG QKGSLV
Sbjct: 606 RNLLGEHVAQKGSLV 620
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 70/163 (42%), Gaps = 32/163 (19%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------ 65
K L G+ ++LYDTYGFP DLT + E+ ++D E + +A +AQ + +AG
Sbjct: 419 KELDGETVFKLYDTYGFPADLTNDVARERDFTIDEEGFNNA-MEAQRQRAREAGKFGVDY 477
Query: 66 -----METSVEFCGGTHLAMAHHV---------GDFCISSEEAIAKGSNIVSY------C 105
++ + EFCG T A + D ++ E+A+ N Y C
Sbjct: 478 NESIKVDVNTEFCGYTGTAAQSSIVALYRDGEAVDSILAGEDALIILDNTPFYAESGGQC 537
Query: 106 GSKGTFQSHSGSINDEMVNKYPSLYRLFRTVHKQKYVQDALNV 148
G G + + N K+ + H+ VQ ALNV
Sbjct: 538 GDAGVLTAENTVFNVSDTQKFGAAIG-----HQGSLVQGALNV 575
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 93/207 (44%), Gaps = 47/207 (22%)
Query: 264 YDEGFMIGVNDE----------GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQ 313
Y+E + VN E ++V L + + VDS+ +G +A I+LD + FYAE GGQ
Sbjct: 477 YNESIKVDVNTEFCGYTGTAAQSSIVALYRDGEAVDSILAGEDALIILDNTPFYAESGGQ 536
Query: 314 IYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQG--GQIYDEGFMIGVNDESQIE--- 368
D G ++ + V +VS D F A G G + +G E+Q++
Sbjct: 537 CGDAGVLTAENTVFNVS---------DTQKFGAAIGHQGSLVQGALNVGDKLEAQVDVVR 587
Query: 369 ------------LWFSSLVNLEGSKYAL------PIFLQFSLSNLK--KKKKLVKLLHTL 408
L S+L NL G A P L+F SNL+ K ++L ++ +
Sbjct: 588 RTAITLNHSATHLLHSALRNLLGEHVAQKGSLVKPDALRFDFSNLEAVKPEQLREIERVV 647
Query: 409 SHTLRVG---DKLKLHIDTARRRPIMS 432
+ +R+ D + I++A+++ M+
Sbjct: 648 NEQIRLNHSIDTNIMDIESAKQKGAMA 674
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%), Gaps = 3/51 (5%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQF 287
VDS+ +G +A I+LD + FYAE GGQ D G + E TV + ++F
Sbjct: 511 VDSILAGEDALIILDNTPFYAESGGQCGDAGVLTA---ENTVFNVSDTQKF 558
>gi|359298897|ref|ZP_09184736.1| alanyl-tRNA synthetase [Haemophilus [parainfluenzae] CCUG 13788]
Length = 874
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 26/143 (18%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
SN + V+ + SG A ++LD++ FY E GGQ+ D G + S + N
Sbjct: 471 ALFSNGESVNEIKSGENAVVILDQTAFYGESGGQVGDSGLI------------SSEICN- 517
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTA 436
F +++ +K ++ + L S +L+VGDK+K ++ RR I NH+A
Sbjct: 518 ------------FQVNDTQKYGQVFGHIGQLTSGSLKVGDKVKAEVEAQRRHAITLNHSA 565
Query: 437 THILNHALRFVLGPEADQKGSLV 459
TH+L+ ALR VLG QKGSLV
Sbjct: 566 THLLHSALREVLGNHVAQKGSLV 588
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
+AK+ ++ L G+VA++LYDTYGFP+DLT + E+ +++D + +E A+ +AQ E
Sbjct: 381 LAKVANNQ-LSGEVAFKLYDTYGFPLDLTADVCRERNIAIDEKGFE-AEMQAQRE 433
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
+N + TVV L N + V+ + SG A ++LD++ FY E GGQ+ D G +S++
Sbjct: 463 LNTDATVVALFSNGESVNEIKSGENAVVILDQTAFYGESGGQVGDSGLISSE 514
>gi|62181330|ref|YP_217747.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|375115667|ref|ZP_09760837.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|75481392|sp|Q57KU6.1|SYA_SALCH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|62128963|gb|AAX66666.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|322715813|gb|EFZ07384.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
Length = 876
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ +++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEVINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + E I G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEVINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+ +++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEVINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|320588479|gb|EFX00948.1| alanyl-tRNA synthetase [Grosmannia clavigera kw1407]
Length = 1117
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 70/132 (53%), Gaps = 25/132 (18%)
Query: 329 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPI-F 387
+ + T GIL+DK+NFYAE GGQ+ D G ++ ++D ++ F L E Y + +
Sbjct: 675 IPANTPLGILVDKTNFYAESGGQVADTGRIV-IDDVAE----FKVLDVQEYGGYVVHNGY 729
Query: 388 LQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFV 447
L++ L GD + + RR PI +NHT TH+LNHALR V
Sbjct: 730 LEYG-------------------ELSSGDNVICEYEELRRAPIRNNHTGTHVLNHALREV 770
Query: 448 LGPEADQKGSLV 459
LG + +QKGSLV
Sbjct: 771 LGDDVNQKGSLV 782
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 37/52 (71%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+K L G WRLYDT+GFP DLTQLM EE+GLS+D E A+++A+ +S
Sbjct: 565 AKTLSGADVWRLYDTFGFPEDLTQLMAEERGLSIDAEEVAVARERAREASKS 616
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 240 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ + T GIL+DK+NFYAE GGQ+ D G ++
Sbjct: 675 IPANTPLGILVDKTNFYAESGGQVADTGRIV 705
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 291 VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+ + T GIL+DK+NFYAE GGQ+ D G
Sbjct: 675 IPANTPLGILVDKTNFYAESGGQVADTG 702
>gi|297852712|ref|XP_002894237.1| cytosolic tRNA-Ala synthetase [Arabidopsis lyrata subsp. lyrata]
gi|297340079|gb|EFH70496.1| cytosolic tRNA-Ala synthetase [Arabidopsis lyrata subsp. lyrata]
Length = 955
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 102/232 (43%), Gaps = 38/232 (16%)
Query: 247 GILLDKSNFYAEQGGQIYD-EGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSN 305
G LD + AE+ + D EGF + + NKQ ++ +A L K+
Sbjct: 423 GFPLDLTQLMAEERRLLVDVEGFNKAMEEARERSRSAQNKQAGGAIVMDADATSTLHKTG 482
Query: 306 FYAEQGGQIYD---------EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 356
A Y + + F++S+++ G++L ++FYAEQGGQI+D G
Sbjct: 483 VSATDDSFKYIWFQDHESELKAIYTGSTFLESLAATDNVGLVLGSTSFYAEQGGQIFDTG 542
Query: 357 FMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHT---LR 413
+EGS F F++ N++ V + LS +
Sbjct: 543 L-------------------IEGS------FGTFNVCNVQIFGGFVVHIGYLSKDAGEVS 577
Query: 414 VGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
VGDK+ +D RR+ I NHT TH+LN AL+ VLG DQKGS+V L
Sbjct: 578 VGDKVICKVDYERRKLIAPNHTCTHMLNFALKEVLGDHIDQKGSIVLPEKLR 629
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 42/60 (70%), Gaps = 4/60 (6%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQSEPESQAG 65
+ L G+ A+ L+DTYGFP+DLTQLM EE+ L VD+E + E+A+++++S QAG
Sbjct: 406 QGNTLSGEDAFVLWDTYGFPLDLTQLMAEERRLLVDVEGFNKAMEEARERSRSAQNKQAG 465
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQS 113
++PE+ S EFCGGTH+ F + SEE IAKG V+ ++ F +
Sbjct: 702 ADPENNEWSLLSSEFCGGTHITNTREAKAFALLSEEGIAKGIRRVTAVTTECAFDA 757
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 236 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
F++S+++ G++L ++FYAEQGGQI+D G + G
Sbjct: 511 FLESLAATDNVGLVLGSTSFYAEQGGQIFDTGLIEG 546
>gi|322712022|gb|EFZ03595.1| alanyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
Length = 952
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 77/149 (51%), Gaps = 34/149 (22%)
Query: 333 TEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSL 392
T GILLDK+NFYAE GGQ+ D G ++ ++D ++F +
Sbjct: 520 TAIGILLDKTNFYAESGGQVADTGRIV-IDD-----------------------VVEFKV 555
Query: 393 SNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLG 449
+++ + LH+ L GD++ D RR PI +NHT TH+LNH+LR VLG
Sbjct: 556 MDVQNYGGFI--LHSGYIEYGALSSGDEVICEYDELRRSPIRNNHTGTHVLNHSLREVLG 613
Query: 450 PEADQKGSLVYRYHL-----HENIMECEE 473
+ +QKGSLV L H++ ++ EE
Sbjct: 614 DDINQKGSLVDNEKLRFDFSHKSQVKIEE 642
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVE 71
L GDV WRLYDT+GFPVDLTQ+M EE+GL +D AK+KA+ E+ ++ SV+
Sbjct: 410 LDGDVVWRLYDTFGFPVDLTQIMAEERGLEIDESEVSVAKEKAR---EASKAVKASVD 464
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 15/84 (17%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + G+ VD + +P+ Q + SVEFCGGTH+
Sbjct: 682 ETYPNPVRVVSI-----GMDVDTML---------KDPKKQEWRQYSVEFCGGTHVEQTGL 727
Query: 84 VGDFCISSEEAIAKG-SNIVSYCG 106
+ D + E IAKG I++Y G
Sbjct: 728 IKDLILVEESGIAKGIRRIIAYTG 751
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 244 TEAGILLDKSNFYAEQGGQIYDEGFMI 270
T GILLDK+NFYAE GGQ+ D G ++
Sbjct: 520 TAIGILLDKTNFYAESGGQVADTGRIV 546
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/24 (70%), Positives = 19/24 (79%)
Query: 295 TEAGILLDKSNFYAEQGGQIYDEG 318
T GILLDK+NFYAE GGQ+ D G
Sbjct: 520 TAIGILLDKTNFYAESGGQVADTG 543
>gi|322694715|gb|EFY86537.1| alanyl-tRNA synthetase [Metarhizium acridum CQMa 102]
Length = 952
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 78/153 (50%), Gaps = 34/153 (22%)
Query: 329 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFL 388
+ T GILLDK+NFYAE GGQ+ D G ++ ++D +
Sbjct: 516 LPKNTAIGILLDKTNFYAESGGQVADTGRIV-IDD-----------------------VV 551
Query: 389 QFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
+F + +++ + LH+ L GD++ D RR PI +NHT TH+LNH+LR
Sbjct: 552 EFKVMDVQNYGGFI--LHSGYIEYGALSSGDEVICEYDELRRSPIRNNHTGTHVLNHSLR 609
Query: 446 FVLGPEADQKGSLVYRYHL-----HENIMECEE 473
VLG + +QKGSLV L H++ ++ EE
Sbjct: 610 EVLGDDINQKGSLVDNEKLRFDFSHKSQVKIEE 642
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVE 71
K L GDV WRLYDT+GFPVDLTQ+M EE+GL +D A++KA+ E+ ++ SV+
Sbjct: 408 KKLDGDVVWRLYDTFGFPVDLTQIMAEERGLEIDEIEVSVAREKAR---EASKAVKASVD 464
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 15/84 (17%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + G+ VD + +P+ Q + SVEFCGGTH+
Sbjct: 682 ETYPNPVRVVSI-----GMDVDTML---------KDPKKQEWRQYSVEFCGGTHVEQTGL 727
Query: 84 VGDFCISSEEAIAKG-SNIVSYCG 106
+ D + E IAKG I++Y G
Sbjct: 728 IKDLILVEESGIAKGIRRIIAYTG 751
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 240 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ T GILLDK+NFYAE GGQ+ D G ++
Sbjct: 516 LPKNTAIGILLDKTNFYAESGGQVADTGRIV 546
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 291 VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+ T GILLDK+NFYAE GGQ+ D G
Sbjct: 516 LPKNTAIGILLDKTNFYAESGGQVADTG 543
>gi|345566669|gb|EGX49611.1| hypothetical protein AOL_s00078g100 [Arthrobotrys oligospora ATCC
24927]
Length = 940
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/146 (41%), Positives = 78/146 (53%), Gaps = 29/146 (19%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
EGF+ + + + + GILLDK+ YAEQGGQIYD G I + +S+I F V
Sbjct: 527 EGFVKS---TEGLEDDVQVGILLDKTCLYAEQGGQIYDFG-TISIPGKSEI---FVDHVV 579
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
G KYAL VK TL+VGD +++ D ARR I NHTA
Sbjct: 580 YHG-KYAL-------------HSGTVKY-----GTLKVGDVVQVEYDEARRSLIRVNHTA 620
Query: 437 THILNHALRFVL---GPEADQKGSLV 459
TH+LN+AL+ VL G E Q+GSLV
Sbjct: 621 THVLNYALKEVLAKNGGEVHQRGSLV 646
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 12/133 (9%)
Query: 2 LQTIAKLGESKVLP--GDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
+ +A+L + P G W+LYDTYGFP+DLT +M EE + +D + A+KKA+
Sbjct: 411 FEQLAELATTTKTPIAGHEVWKLYDTYGFPLDLTYIMAEESSVKIDTDGVLVAEKKAKEI 470
Query: 60 PESQAGMETSVEFCGGTH---------LAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGT 110
+ + ++ H + A+ F + +EAI + S I+ +G
Sbjct: 471 SKVKKVIDGITRLTLDVHALAALKEENIPAANDEAKF-LWGDEAILRDSKILKIFVKEGF 529
Query: 111 FQSHSGSINDEMV 123
+S G +D V
Sbjct: 530 VKSTEGLEDDVQV 542
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 27/38 (71%), Gaps = 4/38 (10%)
Query: 296 EAGILLDKSNFYAEQGGQIYDEGFMS----NKQFVDSV 329
+ GILLDK+ YAEQGGQIYD G +S ++ FVD V
Sbjct: 541 QVGILLDKTCLYAEQGGQIYDFGTISIPGKSEIFVDHV 578
Score = 38.9 bits (89), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 226 KRLRFSYNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEG 267
K L+ + FV S + + GILLDK+ YAEQGGQIYD G
Sbjct: 519 KILKIFVKEGFVKSTEGLEDDVQVGILLDKTCLYAEQGGQIYDFG 563
>gi|417512982|ref|ZP_12177151.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|353638228|gb|EHC83848.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
Length = 854
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ +++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 443 VEVINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 481
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 482 ----FAVDDTQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 537
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 538 RQVLGTHVAQKGSLV 552
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 343 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 401
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + E I G V
Sbjct: 402 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEVINAGQEAVVVLDQTPF 461
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 462 YAESGGQVGDK 472
>gi|86608988|ref|YP_477750.1| alanyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|123751690|sp|Q2JLC4.1|SYA_SYNJB RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|86557530|gb|ABD02487.1| alanyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 884
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 99/228 (43%), Gaps = 34/228 (14%)
Query: 242 SGTEAGILLDKSNFYAEQGGQIYDE-GFMIGVND-----EGTVVGLRYNKQFVDSVSSGT 295
SG +A L D F E +I E GF + + E R Q +D + G+
Sbjct: 390 SGADAFKLFDTYGFPLELTQEIAQEHGFSVDLEGFEQEMEKQRQRARAAHQTIDLTAQGS 449
Query: 296 --EAGILLDKSNF--YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQ 351
E L ++ F Y++ + E + + V V +G ++LD++ FYAE GGQ
Sbjct: 450 LDELADFLSQTEFLGYSQSSARGVVEALLVEGKSVPQVEAGQAVQVVLDRTPFYAEAGGQ 509
Query: 352 IYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHT 411
I D G++ G LV +E + +F+ F
Sbjct: 510 IGDRGYLSGDG----------LLVRIEDVQKQGDLFVHFG--------------RVERGI 545
Query: 412 LRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
LRVGD ++ ID A RR ++HTATH+L AL+ ++ P Q GSLV
Sbjct: 546 LRVGDPVQAQIDLACRRRAQAHHTATHLLQAALKRIVDPSIGQAGSLV 593
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKK 55
K + G A++L+DTYGFP++LTQ + +E G SVD+E +E +K
Sbjct: 386 PKQISGADAFKLFDTYGFPLELTQEIAQEHGFSVDLEGFEQEMEK 430
>gi|292487293|ref|YP_003530165.1| alanyl-tRNA synthetase [Erwinia amylovora CFBP1430]
gi|292900336|ref|YP_003539705.1| alanyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
gi|428784225|ref|ZP_19001717.1| alanyl-tRNA synthetase [Erwinia amylovora ACW56400]
gi|291200184|emb|CBJ47312.1| alanyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
gi|291552712|emb|CBA19757.1| Alanyl-tRNA synthetase [Erwinia amylovora CFBP1430]
gi|426277364|gb|EKV55090.1| alanyl-tRNA synthetase [Erwinia amylovora ACW56400]
Length = 876
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 73/143 (51%), Gaps = 26/143 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q +++S+G E I+LD + FYAE GGQ+ D G L+G+ +
Sbjct: 478 QAANTISAGQEGVIVLDATPFYAESGGQVGDTG-------------------KLQGNSAS 518
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLS-HTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +SN +K + + L+ LRVGD + +D ARR I NH+ATH+L+
Sbjct: 519 ------FIVSNTQKYAQAIGHSGKLAIGELRVGDCVAAQVDEARRARIRLNHSATHLLHA 572
Query: 443 ALRFVLGPEADQKGSLVYRYHLH 465
ALR VLG QKGSLV +L
Sbjct: 573 ALRQVLGQHVSQKGSLVNDTYLR 595
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 14/146 (9%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG---- 65
+ +L G+ +RLYDT+GFPVDLT + E+ L +D +E A ++ + +G
Sbjct: 386 QGDMLDGETVFRLYDTFGFPVDLTADVCRERNLKIDEAGFERAMEQQRQRARDASGFGSD 445
Query: 66 ------METSVEFCGGTHLAMAHHVGDFCISSEEA--IAKGSNIVSYCGSKGTFQSHSGS 117
++ + EF G L + + + + A I+ G V + + G
Sbjct: 446 YNNVIRIDQASEFKGYQQLQLNAAISAIFVDGQAANTISAGQEGVIVLDATPFYAESGGQ 505
Query: 118 INDEMVNKYPSLYRLFRTVHKQKYVQ 143
+ D K F + QKY Q
Sbjct: 506 VGD--TGKLQGNSASFIVSNTQKYAQ 529
>gi|290986366|ref|XP_002675895.1| alanyl-tRNA synthetase [Naegleria gruberi]
gi|284089494|gb|EFC43151.1| alanyl-tRNA synthetase [Naegleria gruberi]
Length = 957
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 25/150 (16%)
Query: 319 FMSNKQFVDSVSSGTEA---GILLDKSNFYAEQGGQIYDEGFM-IGVNDESQIELWFSSL 374
F + FV+ +++ E GI+LD++NFYAE GGQ D G + IG + EL +
Sbjct: 511 FSESSGFVEELNTECEEVNIGIILDQTNFYAEGGGQAPDNGVLRIG-----ETEL---KV 562
Query: 375 VNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNH 434
VN++ K+A I ++S K L+ + VG + ++ RR PI +NH
Sbjct: 563 VNVQ--KFAGYILHIVNVSESK-----------LAGNVTVGTTVSSEVNYERREPIAANH 609
Query: 435 TATHILNHALRFVLGPEADQKGSLVYRYHL 464
T+TH+LN ALR VLG + DQ+GS+V L
Sbjct: 610 TSTHMLNFALRKVLGTDCDQQGSIVKEEEL 639
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKK 55
GES V+ G A++LY TYGFPVDLT +M +E+G++VDM Y+ +K
Sbjct: 413 GES-VVSGPDAFKLYATYGFPVDLTLIMAQEQGMTVDMVEYKKEMEK 458
>gi|312171401|emb|CBX79660.1| Alanyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
Length = 833
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 73/143 (51%), Gaps = 26/143 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q +++S+G E I+LD + FYAE GGQ+ D G L+G+ +
Sbjct: 435 QAANTISAGQEGVIVLDATPFYAESGGQVGDTG-------------------KLQGNSAS 475
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLS-HTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +SN +K + + L+ LRVGD + +D ARR I NH+ATH+L+
Sbjct: 476 ------FIVSNTQKYAQAIGHSGKLAIGELRVGDCVAAQVDEARRARIRLNHSATHLLHA 529
Query: 443 ALRFVLGPEADQKGSLVYRYHLH 465
ALR VLG QKGSLV +L
Sbjct: 530 ALRQVLGQHVSQKGSLVNDTYLR 552
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 61/146 (41%), Gaps = 14/146 (9%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG---- 65
+ +L G+ +RLYDT+GFPVDLT + E+ L +D +E A ++ + +G
Sbjct: 343 QGDMLDGETVFRLYDTFGFPVDLTADVCRERNLKIDEAGFERAMEQQRQRARDASGFGSD 402
Query: 66 ------METSVEFCGGTHLAMAHHVGDFCISSEEA--IAKGSNIVSYCGSKGTFQSHSGS 117
++ + EF G L + + + + A I+ G V + + G
Sbjct: 403 YNNVIRIDQASEFKGYQQLQLNAAISAIFVDGQAANTISAGQEGVIVLDATPFYAESGGQ 462
Query: 118 INDEMVNKYPSLYRLFRTVHKQKYVQ 143
+ D K F + QKY Q
Sbjct: 463 VGD--TGKLQGNSASFIVSNTQKYAQ 486
>gi|395332352|gb|EJF64731.1| hypothetical protein DICSQDRAFT_51965 [Dichomitus squalens LYAD-421
SS1]
Length = 959
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 71/132 (53%), Gaps = 25/132 (18%)
Query: 329 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFL 388
+ T G++LD+++FYAE GGQ YD G +I ++G
Sbjct: 524 IPEDTTFGLILDRTSFYAESGGQEYDTGSII-----------------IDG-------VA 559
Query: 389 QFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFV 447
+F ++N++ V + + + L VGD++ D RR P+ +NHTATHILN++LR V
Sbjct: 560 EFEVTNVQVFNGYVLHIGRMKYGKLAVGDEIVSSYDELRRWPLRNNHTATHILNYSLREV 619
Query: 448 LGPEADQKGSLV 459
LG DQKGSLV
Sbjct: 620 LGDHIDQKGSLV 631
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/34 (70%), Positives = 26/34 (76%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD 45
K L G WRLYDTYGFPVDLT+LM EE GL V+
Sbjct: 414 KELSGKDVWRLYDTYGFPVDLTRLMAEELGLGVN 447
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 61 ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGSIN 119
E+ +TS+E CGGTH+A + DF ++ E IAKG +V+ G + G
Sbjct: 713 ENPRWRKTSIELCGGTHVAKTGEIKDFIVTEESGIAKGIRRVVAVTGHEAAEARRQGESL 772
Query: 120 DEMVNKYPSL 129
+N+ SL
Sbjct: 773 TAQLNRIESL 782
>gi|451818069|ref|YP_007454270.1| alanine--tRNA ligase AlaS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451784048|gb|AGF55016.1| alanine--tRNA ligase AlaS [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 879
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 71/147 (48%), Gaps = 23/147 (15%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + FV+S++ G +A ++ D + YAE GGQI D GF+ ++Q+ + N+
Sbjct: 474 LIEGEDFVESITEGNKAIVVTDVTPLYAEMGGQIGDTGFIFNDGFKAQV---VDTKKNIG 530
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G K+V + LS L+ GDK+ + +D RR I NHTATH
Sbjct: 531 G--------------------KIVHFVEVLSGELKSGDKVTIEVDKERRENIKRNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLVYRYHLH 465
+L+ AL VLG Q GS V L
Sbjct: 571 LLDKALVTVLGSHVHQAGSYVSHDRLR 597
Score = 44.7 bits (104), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 40/60 (66%), Gaps = 2/60 (3%)
Query: 5 IAKLGESK--VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
I +L E+K +L G ++LYDT+GFP++LT+ ++E++GLS+D + + + K + S
Sbjct: 374 IGELKENKETILKGADGFKLYDTFGFPMELTKEILEDEGLSLDEDAFNEEMKIQRERARS 433
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYN-----KQFV 288
+ FV+S++ G +A ++ D + YAE GGQI D GF+ + VV + N FV
Sbjct: 478 EDFVESITEGNKAIVVTDVTPLYAEMGGQIGDTGFIFNDGFKAQVVDTKKNIGGKIVHFV 537
Query: 289 DSVS----SGTEAGILLDK 303
+ +S SG + I +DK
Sbjct: 538 EVLSGELKSGDKVTIEVDK 556
>gi|415711685|ref|ZP_11464339.1| alanyl-tRNA synthetase [Gardnerella vaginalis 55152]
gi|388057801|gb|EIK80614.1| alanyl-tRNA synthetase [Gardnerella vaginalis 55152]
Length = 894
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 22/139 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+ K V SVS+ ++LD++ FYAE+GGQI D+G +I +D+ I LE
Sbjct: 484 AGKGAVKSVSAPANVEVILDRTPFYAERGGQIADQGEII--SDDGAI---------LEVD 532
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
PI K +V TL VG + +ID RR + +HTATH L
Sbjct: 533 DVQRPI-----------KDLIVHSCRLTEGTLSVGAPVNTNIDQVRRAALARSHTATHTL 581
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR LGP+A Q+GS+V
Sbjct: 582 HKALREELGPQATQRGSVV 600
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
K V SVS+ ++LD++ FYAE+GGQI D+G +I +D+G ++
Sbjct: 486 KGAVKSVSAPANVEVILDRTPFYAERGGQIADQGEII--SDDGAIL 529
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD----MEVYEDAKKKAQSE 59
+ ++ G A+ L+DTYGFP++LT M E+G+ VD E+ + K +A+++
Sbjct: 387 DDPIVGGSDAFTLHDTYGFPIELTLEMAAEQGVKVDEAKFRELMSEQKGRARAD 440
>gi|441504451|ref|ZP_20986445.1| Alanyl-tRNA synthetase [Photobacterium sp. AK15]
gi|441427918|gb|ELR65386.1| Alanyl-tRNA synthetase [Photobacterium sp. AK15]
Length = 874
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/136 (36%), Positives = 71/136 (52%), Gaps = 24/136 (17%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+ VDS+++G EA ++L+ + FYAE GGQ D G M G K+
Sbjct: 477 EAVDSINAGEEALVVLNNTPFYAESGGQCGDTGVMTAA-----------------GVKFD 519
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+ +F + + K LV+ TL+VGDKL +D RR + NH+ATH+L+ A
Sbjct: 520 VADTQKFGAA-IGHKGSLVE------GTLKVGDKLTATVDAERRASVSLNHSATHLLHAA 572
Query: 444 LRFVLGPEADQKGSLV 459
LR +LG QKGSLV
Sbjct: 573 LRNLLGEHVAQKGSLV 588
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 12/76 (15%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG---- 65
+ KVL G+ ++LYDTYGFP DLT + E+G S+D E + DA +AQ + +AG
Sbjct: 385 DGKVLDGETVFKLYDTYGFPADLTNDVARERGFSIDEEGFNDA-MEAQRQRAREAGQFGV 443
Query: 66 -------METSVEFCG 74
+E +FCG
Sbjct: 444 DYNEAIKVEADTDFCG 459
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 7/50 (14%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYN 284
+ VDS+++G EA ++L+ + FYAE GGQ D G M T G++++
Sbjct: 477 EAVDSINAGEEALVVLNNTPFYAESGGQCGDTGVM-------TAAGVKFD 519
>gi|10177227|dbj|BAB10601.1| alanyl-tRNA synthetase [Arabidopsis thaliana]
Length = 954
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 28/164 (17%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+ + N + V VS G+E +LLD++ FYAE GGQI D GF+ +D +Q + ++V
Sbjct: 532 KSLLVNGKPVIRVSEGSEVEVLLDRTPFYAESGGQIADHGFLYVSSDGNQEK----AVVE 587
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+ + +L IF+ K VK S L VG +++ +D R+ +HTA
Sbjct: 588 VSDVQKSLKIFVH---------KGTVK-----SGALEVGKEVEAAVDADLRQRAKVHHTA 633
Query: 437 THILNHALRFVLGPEADQKGSLV----------YRYHLHENIME 470
TH+L AL+ V+G E Q GSLV + LH+N +E
Sbjct: 634 THLLQSALKKVVGQETSQAGSLVAFDRLRFDFNFNRSLHDNELE 677
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 2 LQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
L K ++ L G A+ LYDT+GFPV++T + EE+G+S+DM +E
Sbjct: 435 LSIADKTKDTPYLDGKDAFLLYDTFGFPVEITAEVAEERGVSIDMNGFE 483
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N + V VS G+E +LLD++ FYAE GGQI D GF+
Sbjct: 537 NGKPVIRVSEGSEVEVLLDRTPFYAESGGQIADHGFL 573
>gi|16800607|ref|NP_470875.1| alanyl-tRNA synthetase [Listeria innocua Clip11262]
gi|20532255|sp|Q92BK9.1|SYA_LISIN RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|16414012|emb|CAC96770.1| alanyl-tRNA synthetase [Listeria innocua Clip11262]
Length = 879
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 25/162 (15%)
Query: 300 LLDKSNFYAEQGGQIYDE--GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGF 357
L DKS F + E + + VD V+SG+EA ++ ++ FYAE GGQ+ D+G
Sbjct: 453 LTDKSEFVGYNTTEHVSEILYLIQDDTLVDEVASGSEAQVIFKETPFYAESGGQVADKGT 512
Query: 358 MIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDK 417
+ ES+ G Y + + NL + + L+ GD
Sbjct: 513 I-----ESET-----------GVAYVEDVQKAPNKQNLHR-------ISVKEGVLKTGDT 549
Query: 418 LKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+KL +D +RR + NHTATH+L+ AL+ LG +Q GSLV
Sbjct: 550 VKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLV 591
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 32/171 (18%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD-------MEVYE 50
+L+TI AK + + G ++LYDT+GFPV+LT+ E+ GL VD M+
Sbjct: 371 ILETILKNAKETNEQTIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKEQR 430
Query: 51 DAKKKAQSEPESQ-------AGMETSVEFCG---GTHLA-MAHHVGDFCISSEEAIAKGS 99
D + A+++ +S A + EF G H++ + + + D + E A +
Sbjct: 431 DRARSARADVKSMQVQGELLANLTDKSEFVGYNTTEHVSEILYLIQDDTLVDEVASGSEA 490
Query: 100 NIV-----------SYCGSKGTFQSHSGSINDEMVNKYPSLYRLFRTVHKQ 139
++ KGT +S +G E V K P+ L R K+
Sbjct: 491 QVIFKETPFYAESGGQVADKGTIESETGVAYVEDVQKAPNKQNLHRISVKE 541
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 200 LVSSCGFIGSDTGLGDLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQ 259
L F+G +T T+H + L + VD V+SG+EA ++ ++ FYAE
Sbjct: 453 LTDKSEFVGYNT-------TEHVSEI--LYLIQDDTLVDEVASGSEAQVIFKETPFYAES 503
Query: 260 GGQIYDEG 267
GGQ+ D+G
Sbjct: 504 GGQVADKG 511
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 261 GQIYDEGFMIGVNDEGTVVGLRY---NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDE 317
+ D+ +G N V + Y + VD V+SG+EA ++ ++ FYAE GGQ+ D+
Sbjct: 451 ANLTDKSEFVGYNTTEHVSEILYLIQDDTLVDEVASGSEAQVIFKETPFYAESGGQVADK 510
Query: 318 GFMSNK 323
G + ++
Sbjct: 511 GTIESE 516
>gi|440682846|ref|YP_007157641.1| alanyl-tRNA synthetase [Anabaena cylindrica PCC 7122]
gi|428679965|gb|AFZ58731.1| alanyl-tRNA synthetase [Anabaena cylindrica PCC 7122]
Length = 880
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 66/133 (49%), Gaps = 24/133 (18%)
Query: 327 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPI 386
++ +GTE I+LDK+ FYAE GGQI D+G++ G L+ +E K
Sbjct: 483 EAAEAGTEVQIVLDKTPFYAESGGQIGDKGYISG----------DGILIRIEDVKKESDF 532
Query: 387 FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRF 446
F+ F T+R+GD + IDTA RR +NHTATH+L AL+
Sbjct: 533 FIHFG--------------RIERGTIRIGDHVTAQIDTACRRRAQANHTATHLLQAALKK 578
Query: 447 VLGPEADQKGSLV 459
V+ Q GSLV
Sbjct: 579 VVDEGISQAGSLV 591
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 69/140 (49%), Gaps = 22/140 (15%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+++T+ + G+ K + G+ A+ LYDTYGFP++LTQ + EE L+VD+E + +A+ + Q E
Sbjct: 375 IIETVKQQGQ-KSITGESAFTLYDTYGFPLELTQEVAEENNLTVDVEGF-NAEMQKQIE- 431
Query: 61 ESQAGMET-----------------SVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNI 101
++A ET S +F G T A + +S SEEA G+ +
Sbjct: 432 RAKAAHETIDLTVQGSLDKLAEHIHSTDFIGYTATATTAKIEVLLVSGVSEEAAEAGTEV 491
Query: 102 VSYCGSKGTFQSHSGSINDE 121
+ G I D+
Sbjct: 492 QIVLDKTPFYAESGGQIGDK 511
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 289 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
++ +GTE I+LDK+ FYAE GGQI D+G++S
Sbjct: 483 EAAEAGTEVQIVLDKTPFYAESGGQIGDKGYIS 515
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 238 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
++ +GTE I+LDK+ FYAE GGQI D+G++ G
Sbjct: 483 EAAEAGTEVQIVLDKTPFYAESGGQIGDKGYISG 516
>gi|415703345|ref|ZP_11459223.1| alanyl-tRNA synthetase [Gardnerella vaginalis 284V]
gi|415706964|ref|ZP_11461811.1| alanyl-tRNA synthetase [Gardnerella vaginalis 0288E]
gi|388052805|gb|EIK75820.1| alanyl-tRNA synthetase [Gardnerella vaginalis 284V]
gi|388053964|gb|EIK76909.1| alanyl-tRNA synthetase [Gardnerella vaginalis 0288E]
Length = 894
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 22/139 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+ K V SVS+ ++LD++ FYAE+GGQI D+G +I +D+ I LE
Sbjct: 484 AGKGAVKSVSAPANVEVILDRTPFYAERGGQIADQGEII--SDDGAI---------LEVD 532
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
PI K +V TL VG + +ID RR + +HTATH L
Sbjct: 533 DVQRPI-----------KDLIVHSCRLTEGTLSVGAPVNTNIDQVRRAALARSHTATHTL 581
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR LGP+A Q+GS+V
Sbjct: 582 HKALREELGPQATQRGSVV 600
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
K V SVS+ ++LD++ FYAE+GGQI D+G +I +D+G ++
Sbjct: 486 KGAVKSVSAPANVEVILDRTPFYAERGGQIADQGEII--SDDGAIL 529
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD----MEVYEDAKKKAQSE 59
+ ++ G A+ L+DTYGFP++LT M E+G+ VD E+ + K +A+++
Sbjct: 387 DDPIVGGSDAFTLHDTYGFPIELTLEMAAEQGVKVDEAKFRELMSEQKGRARAD 440
>gi|422416005|ref|ZP_16492962.1| alanyl-tRNA synthetase [Listeria innocua FSL J1-023]
gi|313623696|gb|EFR93847.1| alanyl-tRNA synthetase [Listeria innocua FSL J1-023]
Length = 879
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 78/162 (48%), Gaps = 25/162 (15%)
Query: 300 LLDKSNFYAEQGGQIYDE--GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGF 357
L DKS F + E + + VD V+SG+EA ++ ++ FYAE GGQ+ D+G
Sbjct: 453 LTDKSEFVGYNTTEHVSEILYLIQDDTLVDEVASGSEAQVIFKETPFYAESGGQVADKGT 512
Query: 358 MIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDK 417
+ ES+ G Y + + NL + + L+ GD
Sbjct: 513 I-----ESET-----------GVAYVEDVQKAPNKQNLHR-------ISVKEGVLKTGDT 549
Query: 418 LKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+KL +D +RR + NHTATH+L+ AL+ LG +Q GSLV
Sbjct: 550 VKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLV 591
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 32/171 (18%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD-------MEVYE 50
+L+TI AK + + G ++LYDT+GFPV+LT+ E+ GL VD M+
Sbjct: 371 ILETILKNAKETNEQTIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKEQR 430
Query: 51 DAKKKAQSEPESQ-------AGMETSVEFCG---GTHLA-MAHHVGDFCISSEEAIAKGS 99
D + A+++ +S A + EF G H++ + + + D + E A +
Sbjct: 431 DRARSARADVKSMQVQGELLANLTDKSEFVGYNTTEHVSEILYLIQDDTLVDEVASGSEA 490
Query: 100 NIV-----------SYCGSKGTFQSHSGSINDEMVNKYPSLYRLFRTVHKQ 139
++ KGT +S +G E V K P+ L R K+
Sbjct: 491 QVIFKETPFYAESGGQVADKGTIESETGVAYVEDVQKAPNKQNLHRISVKE 541
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 261 GQIYDEGFMIGVNDEGTVVGLRY---NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDE 317
+ D+ +G N V + Y + VD V+SG+EA ++ ++ FYAE GGQ+ D+
Sbjct: 451 ANLTDKSEFVGYNTTEHVSEILYLIQDDTLVDEVASGSEAQVIFKETPFYAESGGQVADK 510
Query: 318 GFMSNK 323
G + ++
Sbjct: 511 GTIESE 516
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 200 LVSSCGFIGSDTGLGDLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQ 259
L F+G +T T+H + L + VD V+SG+EA ++ ++ FYAE
Sbjct: 453 LTDKSEFVGYNT-------TEHVSEI--LYLIQDDTLVDEVASGSEAQVIFKETPFYAES 503
Query: 260 GGQIYDEG 267
GGQ+ D+G
Sbjct: 504 GGQVADKG 511
>gi|385801399|ref|YP_005837802.1| alanine--tRNA ligase [Gardnerella vaginalis HMP9231]
gi|415705008|ref|ZP_11460279.1| alanyl-tRNA synthetase [Gardnerella vaginalis 75712]
gi|333393321|gb|AEF31239.1| alanine--tRNA ligase [Gardnerella vaginalis HMP9231]
gi|388051730|gb|EIK74754.1| alanyl-tRNA synthetase [Gardnerella vaginalis 75712]
Length = 894
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 22/139 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+ K V SVS+ ++LD++ FYAE+GGQI D+G +I +D+ I LE
Sbjct: 484 AGKGAVKSVSAPANVEVILDRTPFYAERGGQIADQGEII--SDDGAI---------LEVD 532
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
PI K +V TL VG + +ID RR + +HTATH L
Sbjct: 533 DVQRPI-----------KDLIVHSCRLTEGTLSVGAPVNTNIDQVRRAALARSHTATHTL 581
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR LGP+A Q+GS+V
Sbjct: 582 HKALREELGPQATQRGSVV 600
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
K V SVS+ ++LD++ FYAE+GGQI D+G +I +D+G ++
Sbjct: 486 KGAVKSVSAPANVEVILDRTPFYAERGGQIADQGEII--SDDGAIL 529
Score = 38.1 bits (87), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD----MEVYEDAKKKAQSE 59
+ ++ G A+ L+DTYGFP++LT M E+G+ VD E+ + K +A+++
Sbjct: 387 DDPIVGGSDAFTLHDTYGFPIELTLEMAAEQGVKVDEAKFRELMSEQKGRARAD 440
>gi|335039187|ref|ZP_08532367.1| alanyl-tRNA synthetase [Caldalkalibacillus thermarum TA2.A1]
gi|334180921|gb|EGL83506.1| alanyl-tRNA synthetase [Caldalkalibacillus thermarum TA2.A1]
Length = 880
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Query: 247 GILLD-KSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLD--- 302
G LD +F EQG ++ EGF E R D S + G+L D
Sbjct: 400 GFPLDLTEDFAGEQGIEVDREGF----EREMEAQRERARAARQDVDSMQVQGGVLGDFKE 455
Query: 303 KSNF--YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 360
KS F Y + Q + + QFVD V SG I+LD++ FYAE GGQ+ D+G +
Sbjct: 456 KSEFVGYDQLRTQAKVLALIVDDQFVDIVPSGQSCQIILDQTPFYAESGGQVADQGVLTA 515
Query: 361 VNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKL 420
E QI+ + G ++ V + TL G +
Sbjct: 516 DGLEVQIK----DVQKGPGGQH-------------------VHQGQVVKGTLTKGSVVTA 552
Query: 421 HIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
ID +R I+ NHTATH+L+ AL+ VLG +Q GSLV
Sbjct: 553 EIDEKKRAAIVKNHTATHLLHQALKDVLGEHVNQAGSLV 591
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
M++ + GE++ L G A+ LYDTYGFP+DLT+ E+G+ VD E +E
Sbjct: 375 MIKELKAKGENR-LSGQQAFTLYDTYGFPLDLTEDFAGEQGIEVDREGFE 423
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
K L + QFVD V SG I+LD++ FYAE GGQ+ D+G +
Sbjct: 470 KVLALIVDDQFVDIVPSGQSCQIILDQTPFYAESGGQVADQGVL 513
>gi|417556125|ref|ZP_12207185.1| alanine--tRNA ligase [Gardnerella vaginalis 315-A]
gi|333603149|gb|EGL14571.1| alanine--tRNA ligase [Gardnerella vaginalis 315-A]
Length = 894
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 22/139 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+ K V SVS+ ++LD++ FYAE+GGQI D+G +I +D+ I LE
Sbjct: 484 AGKGAVKSVSAPANVEVILDRTPFYAERGGQIADQGEII--SDDGAI---------LEVD 532
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
PI K +V TL VG + +ID RR + +HTATH L
Sbjct: 533 DVQRPI-----------KDLIVHSCRLTEGTLSVGAPVNTNIDQVRRAALARSHTATHTL 581
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR LGP+A Q+GS+V
Sbjct: 582 HKALREELGPQATQRGSVV 600
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
K V SVS+ ++LD++ FYAE+GGQI D+G +I +D+G ++
Sbjct: 486 KGAVKSVSAPANVEVILDRTPFYAERGGQIADQGEII--SDDGAIL 529
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD----MEVYEDAKKKAQSE 59
+ ++ G A+ L+DTYGFP++LT M E+G+ VD E+ + K +A+++
Sbjct: 387 DDPIVGGSDAFTLHDTYGFPIELTLEMAAEQGVKVDEAKFRELMSEQKGRARAD 440
>gi|311114977|ref|YP_003986198.1| alanine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
gi|310946471|gb|ADP39175.1| alanine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
Length = 894
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 22/139 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+ K V SVS+ ++LD++ FYAE+GGQI D+G +I +D+ I LE
Sbjct: 484 AGKGAVKSVSAPANVEVILDRTPFYAERGGQIADQGEII--SDDGAI---------LEVD 532
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
PI K +V TL VG + +ID RR + +HTATH L
Sbjct: 533 DVQRPI-----------KDLIVHSCRLTEGTLSVGAPVNTNIDQVRRAALARSHTATHTL 581
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR LGP+A Q+GS+V
Sbjct: 582 HKALREELGPQATQRGSVV 600
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
K V SVS+ ++LD++ FYAE+GGQI D+G +I +D+G ++
Sbjct: 486 KGAVKSVSAPANVEVILDRTPFYAERGGQIADQGEII--SDDGAIL 529
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD----MEVYEDAKKKAQSE 59
+ ++ G A+ L+DTYGFP++LT M E+G+ VD E+ + K +A+++
Sbjct: 387 DDPIVGGSDAFTLHDTYGFPIELTLEMAAEQGVKVDEAKFRELMSEQKGRARAD 440
>gi|51102330|gb|AAT95878.1| alanyl-tRNA synthetase [Naegleria gruberi]
Length = 614
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 25/150 (16%)
Query: 319 FMSNKQFVDSVSSGTEA---GILLDKSNFYAEQGGQIYDEGFM-IGVNDESQIELWFSSL 374
F + FV+ +++ E GI+LD++NFYAE GGQ D G + IG + EL +
Sbjct: 400 FSESSGFVEELNTECEEVNIGIILDQTNFYAEGGGQAPDNGVLRIG-----ETEL---KV 451
Query: 375 VNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNH 434
VN++ K+A I ++S K L+ + VG + ++ RR PI +NH
Sbjct: 452 VNVQ--KFAGYILHIVNVSESK-----------LAGNVTVGTTVSSEVNYERREPIAANH 498
Query: 435 TATHILNHALRFVLGPEADQKGSLVYRYHL 464
T+TH+LN ALR VLG + DQ+GS+V L
Sbjct: 499 TSTHMLNFALRKVLGTDCDQQGSIVKEEEL 528
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKK 55
GES V+ G A++LY TYGFPVDLT +M +E+G++VDM Y+ +K
Sbjct: 302 GES-VVSGPDAFKLYATYGFPVDLTLIMAQEQGMTVDMVEYKKEMEK 347
>gi|221195805|ref|ZP_03568858.1| alanyl-tRNA synthetase [Atopobium rimae ATCC 49626]
gi|221184279|gb|EEE16673.1| alanyl-tRNA synthetase [Atopobium rimae ATCC 49626]
Length = 882
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 23/136 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q VD + G E ++LD++ FYAE GGQ+ D G + N
Sbjct: 478 QEVDCAAVGDEVEVVLDRTPFYAEMGGQVGDTGTLSADN--------------------- 516
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+F+Q S + K+ + + L GD L IDT RR I NHTATH+L+ A
Sbjct: 517 --LFVQVSDTKHKEGNLIAHVGQVEEGELHTGDVLIAVIDTGRRELIRRNHTATHLLDAA 574
Query: 444 LRFVLGPEADQKGSLV 459
L+ +LG +Q GSLV
Sbjct: 575 LKLILGSHVNQAGSLV 590
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
+ KL + L GDVA+ L+DTYGFP+DLT+ + G +V+ ++ A + + + A
Sbjct: 374 LKKLTGDECLSGDVAFLLHDTYGFPIDLTREIAARAGHAVNEAQFDAAMAEQKQRARASA 433
Query: 65 GMET 68
+
Sbjct: 434 NRDA 437
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS-NKQFVDSVSSGTEAG 336
VV L Q VD + G E ++LD++ FYAE GGQ+ D G +S + FV + + G
Sbjct: 470 VVALVKGGQEVDCAAVGDEVEVVLDRTPFYAEMGGQVGDTGTLSADNLFVQVSDTKHKEG 529
Query: 337 ILLDKSNFYAEQGGQIYDEGFMIGVNDESQIEL 369
L+ E G+++ +I V D + EL
Sbjct: 530 NLIAHVGQVEE--GELHTGDVLIAVIDTGRREL 560
>gi|415722011|ref|ZP_11468899.1| alanyl-tRNA synthetase [Gardnerella vaginalis 00703Bmash]
gi|388060175|gb|EIK82874.1| alanyl-tRNA synthetase [Gardnerella vaginalis 00703Bmash]
Length = 893
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 22/139 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+ K V SVS+ ++LD++ FYAE+GGQI D+G +I +D+ I LE
Sbjct: 484 AGKGSVKSVSAPANVEVILDRTPFYAERGGQIADQGEII--SDDGAI---------LEVD 532
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
PI K +V TL VG + +ID RR + +HTATH L
Sbjct: 533 DVQRPI-----------KDLIVHSCRLTEGTLSVGAPVNTNIDQVRRAALARSHTATHTL 581
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR LGP+A Q+GS+V
Sbjct: 582 HKALREELGPQATQRGSVV 600
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
K V SVS+ ++LD++ FYAE+GGQI D+G +I +D+G ++
Sbjct: 486 KGSVKSVSAPANVEVILDRTPFYAERGGQIADQGEII--SDDGAIL 529
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD----MEVYEDAKKKAQSE 59
+ ++ G A+ L+DTYGFP++LT M E+G+ VD E+ + K +A+++
Sbjct: 387 DDPIVGGSDAFTLHDTYGFPIELTLEMAAEQGVKVDEAKFRELMSEQKGRARAD 440
>gi|415723238|ref|ZP_11469412.1| alanyl-tRNA synthetase [Gardnerella vaginalis 00703C2mash]
gi|388063688|gb|EIK86257.1| alanyl-tRNA synthetase [Gardnerella vaginalis 00703C2mash]
Length = 893
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 22/139 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+ K V SVS+ ++LD++ FYAE+GGQI D+G +I +D+ I LE
Sbjct: 484 AGKGSVKSVSAPANVEVILDRTPFYAERGGQIADQGEII--SDDGAI---------LEVD 532
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
PI K +V TL VG + +ID RR + +HTATH L
Sbjct: 533 DVQRPI-----------KDLIVHSCRLTEGTLSVGAPVNTNIDQVRRAALARSHTATHTL 581
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR LGP+A Q+GS+V
Sbjct: 582 HKALREELGPQATQRGSVV 600
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
K V SVS+ ++LD++ FYAE+GGQI D+G +I +D+G ++
Sbjct: 486 KGSVKSVSAPANVEVILDRTPFYAERGGQIADQGEII--SDDGAIL 529
Score = 38.1 bits (87), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD----MEVYEDAKKKAQSE 59
+ ++ G A+ L+DTYGFP++LT M E+G+ VD E+ + K +A+++
Sbjct: 387 DDPIVGGSDAFTLHDTYGFPIELTLEMAAEQGVKVDEAKFRELMSEQKGRARAD 440
>gi|239816150|ref|YP_002945060.1| alanyl-tRNA synthetase [Variovorax paradoxus S110]
gi|239802727|gb|ACS19794.1| alanyl-tRNA synthetase [Variovorax paradoxus S110]
Length = 874
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 77/162 (47%), Gaps = 38/162 (23%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V + G ++LD + FY+E GGQ+ D+G ++ EG
Sbjct: 479 VQQLKEGQPGIVVLDTTPFYSESGGQVGDQGVLVA-----------------EG------ 515
Query: 386 IFLQFSLSNLKKKKKLVKLLH--TLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+QF + + +K K V H TL+VGD +K +DTARR M NH+ TH+++ A
Sbjct: 516 --VQFGVDDTQKIKADVFGHHGTQTQGTLKVGDTVKAAVDTARRAATMRNHSVTHLMHKA 573
Query: 444 LRFVLGPEADQKGSLV----YRYHL-------HENIMECEEE 474
LR VLG QKGSLV R+ H+ I+E E+
Sbjct: 574 LREVLGAHVQQKGSLVDADKTRFDFAHNAAVTHDQILEIEKR 615
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA--KKKAQSEPESQAGM 66
G+++ LPG+VA++L+DTYGFP+DL+ + E+G+SVD + A K+KA + M
Sbjct: 385 GDARTLPGEVAFKLHDTYGFPLDLSADVCRERGVSVDEAGFNAAMEKQKAAGRAAGKFKM 444
Query: 67 ETSVEFCGG 75
+ +VE+ G
Sbjct: 445 DRNVEYGGA 453
>gi|238753177|ref|ZP_04614619.1| Alanyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
gi|238708604|gb|EEQ00880.1| Alanyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
Length = 846
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N + VD + G EA ++L+++ FY E GGQ+ D+G L N
Sbjct: 443 ALFRNGEAVDEIHEGEEAVVVLNQTPFYGESGGQVGDKG----------------ELKNA 486
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+ F++S+ +K + + L L+H TLRV + +D ARR I NH+A
Sbjct: 487 TAT---------FAVSDTQKYGQAIGHLGQLTHGTLRVNHSIDAQVDVARRNRIRLNHSA 537
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR LG QKGSLV +L
Sbjct: 538 THLLHAALRKTLGEHVAQKGSLVNDKYLR 566
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
L G+ A+RLYDTYGFPVDLT + E+ L VD +E A + + +G
Sbjct: 360 TLDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSG 412
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS 331
V+ + TV L N + VD + G EA ++L+++ FY E GGQ+ D+G + N +VS
Sbjct: 435 VHQQATVTALFRNGEAVDEIHEGEEAVVVLNQTPFYGESGGQVGDKGELKNATATFAVSD 494
Query: 332 GTEAG 336
+ G
Sbjct: 495 TQKYG 499
>gi|415709461|ref|ZP_11463086.1| alanyl-tRNA synthetase [Gardnerella vaginalis 6420B]
gi|388056133|gb|EIK79009.1| alanyl-tRNA synthetase [Gardnerella vaginalis 6420B]
Length = 894
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 22/139 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+ K V SV++ I+LD++ FYAE+GGQI D+G +I +D+ I LE
Sbjct: 484 AGKGSVKSVTAPANVEIILDRTPFYAERGGQIADQGEII--SDDGAI---------LEVD 532
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
PI K +V TL VG + +ID RR + +HTATH L
Sbjct: 533 DVQRPI-----------KDLIVHSCRLTEGTLSVGSPVNTNIDQVRRAALARSHTATHTL 581
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR LGP+A Q+GS+V
Sbjct: 582 HKALREELGPQATQRGSVV 600
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
K V SV++ I+LD++ FYAE+GGQI D+G +I +D+G ++
Sbjct: 486 KGSVKSVTAPANVEIILDRTPFYAERGGQIADQGEII--SDDGAIL 529
>gi|359460971|ref|ZP_09249534.1| alanyl-tRNA synthetase [Acaryochloris sp. CCMEE 5410]
Length = 873
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 68/134 (50%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD S+G+E I+LD++ FYAE GGQI D G++ G + +V +E +
Sbjct: 475 VDQASAGSEVQIVLDQTPFYAESGGQIGDRGYLNGKD----------VVVRIEDVQKESD 524
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
IF+ + TL+ GDKL ID A RR + ++HTATH+L AL+
Sbjct: 525 IFIHYG--------------RIERGTLKKGDKLTAQIDLACRRQVQAHHTATHLLQAALK 570
Query: 446 FVLGPEADQKGSLV 459
++ Q GSLV
Sbjct: 571 NIVDESIGQAGSLV 584
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ K + G A+ LYDTYGFP++LTQ + E+GL+VD + A K+ Q S
Sbjct: 376 KPKQISGKDAFDLYDTYGFPLELTQEIAAEQGLTVDEGGFAKAMKEQQDRGRS 428
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 26/35 (74%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VD S+G+E I+LD++ FYAE GGQI D G++ G
Sbjct: 475 VDQASAGSEVQIVLDQTPFYAESGGQIGDRGYLNG 509
>gi|421074116|ref|ZP_15535157.1| alanyl-tRNA synthetase [Pelosinus fermentans JBW45]
gi|392527783|gb|EIW50868.1| alanyl-tRNA synthetase [Pelosinus fermentans JBW45]
Length = 872
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 85/176 (48%), Gaps = 29/176 (16%)
Query: 284 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSN 343
++Q + +S +++D+ +AE G I N VD V G + +LD ++
Sbjct: 438 DQQIIPDLSHLETEKLIVDE---HAENGNIIL---AWKNGILVDEVHDGEDVAFILDVTS 491
Query: 344 FYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVK 403
F+AE GGQ+ D GF+ G + +I LVN G+ Y +
Sbjct: 492 FHAEGGGQVGDTGFLEGSLGKMKITA-TRKLVN--GTTYHVG------------------ 530
Query: 404 LLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+ RVGD +KL +D RRR I NHTATH+L+ AL+ VLG +Q GSLV
Sbjct: 531 --NVTEGLFRVGDLVKLKVDENRRREIARNHTATHLLHAALKQVLGTHVNQSGSLV 584
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 2 LQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPE 61
+Q + +L S VL G A++LYDT+GFP +LT ++EE + +D ++ A K+ +
Sbjct: 372 IQKLKELNIS-VLDGATAFKLYDTFGFPWELTLEILEEHDMQLDKPNFDSAMKEQRERAR 430
Query: 62 S 62
+
Sbjct: 431 A 431
>gi|415726500|ref|ZP_11470839.1| alanyl-tRNA synthetase [Gardnerella vaginalis 00703Dmash]
gi|388063110|gb|EIK85702.1| alanyl-tRNA synthetase [Gardnerella vaginalis 00703Dmash]
Length = 894
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 22/139 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+ K V SV++ I+LD++ FYAE+GGQI D+G +I +D+ I LE
Sbjct: 484 AGKGSVKSVTAPANVEIILDRTPFYAERGGQIADQGEII--SDDGAI---------LEVD 532
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
PI K +V TL VG + +ID RR + +HTATH L
Sbjct: 533 DVQRPI-----------KDLIVHSCRLTEGTLSVGAPVNTNIDQVRRAALARSHTATHTL 581
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR LGP+A Q+GS+V
Sbjct: 582 HKALREELGPQATQRGSVV 600
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
K V SV++ I+LD++ FYAE+GGQI D+G +I +D+G ++
Sbjct: 486 KGSVKSVTAPANVEIILDRTPFYAERGGQIADQGEII--SDDGAIL 529
>gi|159476100|ref|XP_001696152.1| hypothetical protein CHLREDRAFT_119554 [Chlamydomonas reinhardtii]
gi|158275323|gb|EDP01101.1| predicted protein [Chlamydomonas reinhardtii]
Length = 879
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 23/144 (15%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G M V+ V +G +LLD + FYAE GGQ+ D G +
Sbjct: 465 GLMRGGAPVEVVEAGDRCEVLLDSTPFYAESGGQVGDMGVLTA----------------- 507
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTL---SHTLRVGDKLKLHIDTARRRPIMSNH 434
GS A + S+S+ +K +HT + LRVGD++ +D RR + ++H
Sbjct: 508 HGSGEAA---AELSVSDCQKAAGGSVFVHTCEVKAGQLRVGDQVTALVDEDLRRRVRAHH 564
Query: 435 TATHILNHALRFVLGPEADQKGSL 458
TATH+L AL+ VLGP+ Q+GSL
Sbjct: 565 TATHLLQSALKAVLGPDTCQQGSL 588
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 31/41 (75%), Gaps = 1/41 (2%)
Query: 19 AWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
A+ LYDT+GFP++LTQ + E +G+ VD+ +E A+ +AQ +
Sbjct: 383 AFMLYDTFGFPLELTQELAEARGVDVDVSGFE-AEMEAQRQ 422
>gi|30688660|ref|NP_680210.2| alanyl-tRNA synthetase [Arabidopsis thaliana]
gi|322510075|sp|Q9FFC7.2|SYAP_ARATH RecName: Full=Probable alanine--tRNA ligase, chloroplastic;
AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS;
AltName: Full=Protein EMBRYO DEFECTIVE 1030; AltName:
Full=Protein EMBRYO DEFECTIVE 263; AltName: Full=Protein
EMBRYO DEFECTIVE 86; Flags: Precursor
gi|332005698|gb|AED93081.1| alanyl-tRNA synthetase [Arabidopsis thaliana]
Length = 978
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 84/164 (51%), Gaps = 28/164 (17%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+ + N + V VS G+E +LLD++ FYAE GGQI D GF+ +D +Q + ++V
Sbjct: 556 KSLLVNGKPVIRVSEGSEVEVLLDRTPFYAESGGQIADHGFLYVSSDGNQEK----AVVE 611
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+ + +L IF+ K VK S L VG +++ +D R+ +HTA
Sbjct: 612 VSDVQKSLKIFVH---------KGTVK-----SGALEVGKEVEAAVDADLRQRAKVHHTA 657
Query: 437 THILNHALRFVLGPEADQKGSLV----------YRYHLHENIME 470
TH+L AL+ V+G E Q GSLV + LH+N +E
Sbjct: 658 THLLQSALKKVVGQETSQAGSLVAFDRLRFDFNFNRSLHDNELE 701
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 31/44 (70%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
K ++ L G A+ LYDT+GFPV++T + EE+G+S+DM +E
Sbjct: 464 KTKDTPYLDGKDAFLLYDTFGFPVEITAEVAEERGVSIDMNGFE 507
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N + V VS G+E +LLD++ FYAE GGQI D GF+
Sbjct: 561 NGKPVIRVSEGSEVEVLLDRTPFYAESGGQIADHGFL 597
>gi|440229532|ref|YP_007343325.1| alanyl-tRNA synthetase [Serratia marcescens FGI94]
gi|440051237|gb|AGB81140.1| alanyl-tRNA synthetase [Serratia marcescens FGI94]
Length = 875
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 70/142 (49%), Gaps = 24/142 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q V+++ +G +A ++LD + FY E GGQ+ D+G + E V + KY
Sbjct: 478 QPVEAIHAGEDAVVVLDSTPFYGESGGQVGDKGVLKAAAAE---------FVVADTQKYG 528
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+ Q L+ TL+VGD + ID ARR I NH+ATH+L+ A
Sbjct: 529 QALGHQGKLAQ---------------GTLKVGDSVDAEIDQARRNRIRLNHSATHLLHEA 573
Query: 444 LRFVLGPEADQKGSLVYRYHLH 465
LR VLG QKGSLV +L
Sbjct: 574 LRQVLGEHVAQKGSLVNDKYLR 595
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 70/153 (45%), Gaps = 15/153 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ ++KL + L G+ A+RLYDTYGFPVDLT + E+GL VD +++A + +
Sbjct: 380 EELSKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERGLKVDEAGFDEAMEAQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++ + EFCG H + V + EAI G + V S
Sbjct: 439 SSGFGADYNSMIRVDGTSEFCGYDHDKLQAKVTALFRDGQPVEAIHAGEDAVVVLDSTPF 498
Query: 111 FQSHSGSINDEMVNKYPSLYRLFRTVHKQKYVQ 143
+ G + D+ V K + F QKY Q
Sbjct: 499 YGESGGQVGDKGVLKAAAAE--FVVADTQKYGQ 529
>gi|83775369|dbj|BAE65489.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391864417|gb|EIT73713.1| Alanyl-tRNA synthetase [Aspergillus oryzae 3.042]
Length = 939
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 25/135 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
+ + G + G++LD++NFYAEQGGQ D G ++ ++ ++++E+ L + Y L
Sbjct: 502 TEQIPEGDQLGLILDRTNFYAEQGGQENDTGRIV-IDGQAELEVGDVQLY----AGYVLH 556
Query: 386 I-FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F+++ +L VGD++ D RR PI +NHT THILN AL
Sbjct: 557 TGFMKYG-------------------SLSVGDEVICEYDELRRWPIRNNHTGTHILNFAL 597
Query: 445 RFVLGPEADQKGSLV 459
+ VLG +QKGSLV
Sbjct: 598 KEVLGDGVEQKGSLV 612
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQ 63
G+ K+ DV WRLYDT+GFPVDLT++M EE+GL +D +E+A+ +A+ + Q
Sbjct: 394 GDDKLHGADV-WRLYDTFGFPVDLTRIMAEERGLRIDDTEFEEARSRAKEASKGQ 447
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ + G + G++LD++NFYAEQGGQ D G ++
Sbjct: 502 TEQIPEGDQLGLILDRTNFYAEQGGQENDTGRIV 535
Score = 38.5 bits (88), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 288 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+ + G + G++LD++NFYAEQGGQ D G
Sbjct: 502 TEQIPEGDQLGLILDRTNFYAEQGGQENDTG 532
>gi|440635965|gb|ELR05884.1| alanyl-tRNA synthetase [Geomyces destructans 20631-21]
Length = 1016
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 75/148 (50%), Gaps = 29/148 (19%)
Query: 314 IYD--EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWF 371
IYD + S K+ V +G G++LD++NFYAE GGQ+ D G IG++ ++ ++
Sbjct: 564 IYDGKDFLKSTKELV----AGQNFGLMLDRTNFYAESGGQVADVG-RIGIDGGAEFKV-- 616
Query: 372 SSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIM 431
V G FL+ L D++ L D RR+PI
Sbjct: 617 -VDVQAYGGYILHNGFLE-------------------QGQLSADDEVTLEYDEIRRQPIR 656
Query: 432 SNHTATHILNHALRFVLGPEADQKGSLV 459
+NHT THILNH+LR VLG E QKGSLV
Sbjct: 657 NNHTGTHILNHSLREVLGDEVHQKGSLV 684
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 33/49 (67%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
L GD WRLYDTYGFP DLT++M +E+ + + E E A+ KA+ +S
Sbjct: 471 LTGDEVWRLYDTYGFPEDLTKIMADERNIGYNDEEIEIARLKAREASKS 519
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
++P+++ + SVEFCGGTH+ + D I E IAKG I++Y G
Sbjct: 763 ADPKNEEWRKVSVEFCGGTHVDQTGEIKDLIIVEESGIAKGIRRIIAYTG 812
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%), Gaps = 5/51 (9%)
Query: 227 RLRFSYN-KQFVDSVS---SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
+++F Y+ K F+ S +G G++LD++NFYAE GGQ+ D G IG++
Sbjct: 560 KVKFIYDGKDFLKSTKELVAGQNFGLMLDRTNFYAESGGQVADVG-RIGID 609
>gi|415718663|ref|ZP_11467469.1| alanyl-tRNA synthetase [Gardnerella vaginalis 1500E]
gi|388059705|gb|EIK82423.1| alanyl-tRNA synthetase [Gardnerella vaginalis 1500E]
Length = 894
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 22/139 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+ K V SV++ I+LD++ FYAE+GGQI D+G +I +D+ I LE
Sbjct: 484 AGKGSVKSVTAPANVEIILDRTPFYAERGGQIADQGEII--SDDGAI---------LEVD 532
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
PI K +V TL VG + +ID RR + +HTATH L
Sbjct: 533 DVQRPI-----------KDLIVHSCRLTEGTLSVGAPVNTNIDQVRRAALARSHTATHTL 581
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR LGP+A Q+GS+V
Sbjct: 582 HKALREELGPQATQRGSVV 600
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
K V SV++ I+LD++ FYAE+GGQI D+G +I +D+G ++
Sbjct: 486 KGSVKSVTAPANVEIILDRTPFYAERGGQIADQGEII--SDDGAIL 529
>gi|170092939|ref|XP_001877691.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647550|gb|EDR11794.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 955
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 71/141 (50%), Gaps = 33/141 (23%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI--GVNDESQIELWFSSLVNLEGSK 381
Q D + G GI+LDK++FYAE GGQ YD G ++ GV D
Sbjct: 517 QSTDIMPEGATFGIILDKTSFYAEAGGQEYDTGNIVIDGVAD------------------ 558
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHT--LSH-TLRVGDKLKLHIDTARRRPIMSNHTATH 438
F ++N++ V LHT L + L VG ++ D RR P+ +NHTATH
Sbjct: 559 --------FEVTNVQSYNGYV--LHTGHLKYGQLAVGKEVISSYDELRRWPLRNNHTATH 608
Query: 439 ILNHALRFVLGPEADQKGSLV 459
ILN LR VLG DQKGSLV
Sbjct: 609 ILNFCLREVLGDHIDQKGSLV 629
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK---KKAQSEP 60
T AK K L G WRLYDT+GFPVDLT+LM EE GL V+ + +E+A+ K+A
Sbjct: 404 TRAKEQGLKELNGRDVWRLYDTFGFPVDLTRLMAEELGLGVNDQEFEEAQAWSKEASKAS 463
Query: 61 ESQAG 65
Q G
Sbjct: 464 SKQVG 468
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 61 ESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGS 117
E+ TSVEFCGGTH+A + DF I+ E IAKG IV+ G ++HS +
Sbjct: 711 ENPKWRRTSVEFCGGTHVARTGDIKDFIITEESGIAKGIRRIVAITGH----EAHSAA 764
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 5/48 (10%)
Query: 232 YNKQF---VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI--GVND 274
Y K F D + G GI+LDK++FYAE GGQ YD G ++ GV D
Sbjct: 511 YEKSFPQSTDIMPEGATFGIILDKTSFYAEAGGQEYDTGNIVIDGVAD 558
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 268 FMIGVNDEGTVVGLRYNKQF---VDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
F +G N V + Y K F D + G GI+LDK++FYAE GGQ YD G
Sbjct: 497 FNLG-NIRALVKAIFYEKSFPQSTDIMPEGATFGIILDKTSFYAEAGGQEYDTG 549
>gi|415714506|ref|ZP_11465545.1| alanyl-tRNA synthetase [Gardnerella vaginalis 1400E]
gi|388059107|gb|EIK81865.1| alanyl-tRNA synthetase [Gardnerella vaginalis 1400E]
Length = 894
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 22/139 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+ K V SV++ I+LD++ FYAE+GGQI D+G +I +D+ I LE
Sbjct: 484 AGKGAVKSVTAPANVEIILDRTPFYAERGGQIADQGEII--SDDGAI---------LEVD 532
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
PI K +V TL VG + +ID RR + +HTATH L
Sbjct: 533 DVQRPI-----------KDLIVHSCRLTEGTLSVGAPVNTNIDQVRRAALARSHTATHTL 581
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR LGP+A Q+GS+V
Sbjct: 582 HKALREELGPQATQRGSVV 600
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
K V SV++ I+LD++ FYAE+GGQI D+G +I +D+G ++
Sbjct: 486 KGAVKSVTAPANVEIILDRTPFYAERGGQIADQGEII--SDDGAIL 529
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD----MEVYEDAKKKAQSE 59
+ ++ G A+ L+DTYGFP++LT M E+G+ VD E+ + K +A+++
Sbjct: 387 DDPIVGGSDAFTLHDTYGFPIELTLEMAAEQGVKVDEAKFRELMSEQKGRARAD 440
>gi|385208723|ref|ZP_10035591.1| alanine--tRNA ligase [Burkholderia sp. Ch1-1]
gi|385181061|gb|EIF30337.1| alanine--tRNA ligase [Burkholderia sp. Ch1-1]
Length = 874
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 70/136 (51%), Gaps = 27/136 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V S G +A ++LD + FYAE GGQ+ D+G + +
Sbjct: 479 VQQASQGQQAVVVLDHTPFYAESGGQVGDQGVLANAS----------------------- 515
Query: 386 IFLQFSLSN-LKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
++F++S+ LK + +V TL TL+VGD +K ID RR NH+ATH+++ A
Sbjct: 516 --VRFAVSDTLKVQADVVGHHGTLEQGTLKVGDVVKAEIDAVRRARTARNHSATHLMHKA 573
Query: 444 LRFVLGPEADQKGSLV 459
LR VLG QKGSLV
Sbjct: 574 LREVLGTHVQQKGSLV 589
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA--KKKAQSEPESQAGM 66
G SK L G++A++L+DTYGFP+DLT + E+ ++VD +++A +++ Q+ + M
Sbjct: 384 GSSKTLDGELAFKLHDTYGFPLDLTADVCREREVTVDEAAFDEAMTRQREQARAAGKFKM 443
Query: 67 ETSVEFCG 74
+E+ G
Sbjct: 444 AQGLEYSG 451
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVS 330
V D+ V+ L V S G +A ++LD + FYAE GGQ+ D+G ++N +VS
Sbjct: 463 VFDDAKVIALYVEGASVQQASQGQQAVVVLDHTPFYAESGGQVGDQGVLANASVRFAVS 521
>gi|91784488|ref|YP_559694.1| alanyl-tRNA synthetase [Burkholderia xenovorans LB400]
gi|122970272|sp|Q13W97.1|SYA_BURXL RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|91688442|gb|ABE31642.1| alanyl-tRNA synthetase [Burkholderia xenovorans LB400]
Length = 874
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 70/136 (51%), Gaps = 27/136 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V S G +A ++LD + FYAE GGQ+ D+G + +
Sbjct: 479 VQQASQGQQAVVVLDHTPFYAESGGQVGDQGVLANAS----------------------- 515
Query: 386 IFLQFSLSN-LKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
++F++S+ LK + +V TL TL+VGD +K ID RR NH+ATH+++ A
Sbjct: 516 --VRFAVSDTLKVQADVVGHHGTLEQGTLKVGDVVKAEIDAVRRARTARNHSATHLMHKA 573
Query: 444 LRFVLGPEADQKGSLV 459
LR VLG QKGSLV
Sbjct: 574 LREVLGTHVQQKGSLV 589
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA--KKKAQSEPESQAGM 66
G SK L G++A++L+DTYGFP+DLT + E+ ++VD +++A +++ Q+ + M
Sbjct: 384 GSSKTLDGELAFKLHDTYGFPLDLTADVCREREVTVDEAAFDEAMTRQREQARAAGKFKM 443
Query: 67 ETSVEFCG 74
+E+ G
Sbjct: 444 AQGLEYSG 451
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVS 330
V D+ V+ L V S G +A ++LD + FYAE GGQ+ D+G ++N +VS
Sbjct: 463 VFDDAKVIALYVEGASVQQASQGQQAVVVLDHTPFYAESGGQVGDQGVLANASVRFAVS 521
>gi|415729000|ref|ZP_11472297.1| alanyl-tRNA synthetase [Gardnerella vaginalis 6119V5]
gi|388064751|gb|EIK87274.1| alanyl-tRNA synthetase [Gardnerella vaginalis 6119V5]
Length = 894
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 22/139 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+ K V SV++ I+LD++ FYAE+GGQI D+G +I +D+ I LE
Sbjct: 484 AGKGSVKSVTAPANVEIILDRTPFYAERGGQIADQGEII--SDDGAI---------LEVD 532
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
PI K +V TL VG + +ID RR + +HTATH L
Sbjct: 533 DVQRPI-----------KDLIVHSCRLTEGTLSVGAPVNTNIDQVRRAALARSHTATHTL 581
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR LGP+A Q+GS+V
Sbjct: 582 HKALREELGPQATQRGSVV 600
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
K V SV++ I+LD++ FYAE+GGQI D+G +I +D+G ++
Sbjct: 486 KGSVKSVTAPANVEIILDRTPFYAERGGQIADQGEII--SDDGAIL 529
>gi|346321718|gb|EGX91317.1| alanyl-tRNA synthetase [Cordyceps militaris CM01]
Length = 956
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 71/128 (55%), Gaps = 25/128 (19%)
Query: 333 TEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPI-FLQFS 391
T G+LL+K+NFYAE GGQI D G +I ++D ++ ++ + N G Y L ++++
Sbjct: 522 TAVGLLLNKTNFYAESGGQIADTGRII-IDDVAEFKVM--DVQNFGG--YVLHSGYIEYG 576
Query: 392 LSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPE 451
L GD++ D RR PI +NH+ TH+LNHALR VLG +
Sbjct: 577 -------------------ALSSGDEVICEYDELRRSPIRNNHSGTHVLNHALREVLGED 617
Query: 452 ADQKGSLV 459
+QKGSLV
Sbjct: 618 INQKGSLV 625
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 41/61 (67%), Gaps = 2/61 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVE 71
K L GDV WRLYDT+GFPVDLT+LM EE+GL +D E AK KA+ S+A + S
Sbjct: 409 KKLDGDVVWRLYDTFGFPVDLTKLMAEERGLDIDEAEVEVAKDKARE--ASKAVKDASAT 466
Query: 72 F 72
F
Sbjct: 467 F 467
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 15/84 (17%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + G+ +D + +EP+ + SVEFCGGTH+
Sbjct: 684 ETYPNPVRVVSI-----GMDIDTML---------AEPKKADWRKYSVEFCGGTHVEHTGL 729
Query: 84 VGDFCISSEEAIAKG-SNIVSYCG 106
+ D I E IAKG I++Y G
Sbjct: 730 LKDLLIVEESGIAKGIRRIIAYTG 753
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 244 TEAGILLDKSNFYAEQGGQIYDEGFMI 270
T G+LL+K+NFYAE GGQI D G +I
Sbjct: 522 TAVGLLLNKTNFYAESGGQIADTGRII 548
>gi|429143632|gb|AFZ77084.1| alanyl-tRNA synthetase [Gilliamella apicola]
Length = 877
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 79/170 (46%), Gaps = 30/170 (17%)
Query: 300 LLDKSNFY----AEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDE 355
L DK+ F E G++ N Q V+++ +G EA ++LDK+ FY E GGQI D+
Sbjct: 451 LDDKTEFLGYQATESSGKVI--AIFKNGQKVENIHAGDEAIVVLDKTPFYGESGGQIGDK 508
Query: 356 GFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVG 415
G + N E + + KY + + L + +L+VG
Sbjct: 509 GLLTAANLEFNV---------FDSQKYG---------------QSIGHLGQIIKGSLKVG 544
Query: 416 DKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
D + ID R I NH+ATH+L AL+ +LG QKGSLV +L
Sbjct: 545 DNVTAAIDVELRERIRRNHSATHLLQAALQRILGNHVHQKGSLVNDSYLR 594
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 38/50 (76%), Gaps = 4/50 (8%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQ 57
KVLPGD+A++LYDTYGFP+DLT + EK +++D + + E+ +K+A+
Sbjct: 387 KVLPGDIAFKLYDTYGFPLDLTADVCREKNITIDEDGFNQCMEEQRKRAR 436
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
G V+ + N Q V+++ +G EA ++LDK+ FY E GGQI D+G ++
Sbjct: 467 GKVIAIFKNGQKVENIHAGDEAIVVLDKTPFYGESGGQIGDKGLLT 512
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV 278
N Q V+++ +G EA ++LDK+ FY E GGQI D+G + N E V
Sbjct: 475 NGQKVENIHAGDEAIVVLDKTPFYGESGGQIGDKGLLTAANLEFNV 520
>gi|320449491|ref|YP_004201587.1| alanyl-tRNA synthetase [Thermus scotoductus SA-01]
gi|320149660|gb|ADW21038.1| alanyl-tRNA synthetase [Thermus scotoductus SA-01]
Length = 882
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 107/241 (44%), Gaps = 53/241 (21%)
Query: 240 VSSGTEAGILLDKSNF--------YAEQGGQIYDEGFMIGVND--EGTVVGLRYNKQFVD 289
V G EA L D F AE+G + EGF + + E + + + ++
Sbjct: 393 VLPGAEAFRLYDTYGFPLDLTVEIAAERGFGVDTEGFKRAMEEQQERSRAAMAFEREIFK 452
Query: 290 SVSSGTEAGILLDKSNFYAEQG-------GQIYDEG----FMSNKQFVDSVSSGTEAGIL 338
+ E YAE+G G + EG ++ Q ++ GTE ++
Sbjct: 453 KSAQVLE--------ELYAERGATEFLGYGTLEAEGTVLALLAGDQSLEEAGPGTEVQVV 504
Query: 339 LDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKK 398
LD++ FYAE GGQI D G + + +++E ++L G IFL +
Sbjct: 505 LDRTPFYAEGGGQIGDFGHLEWPSGRARVE---TTLKTERG------IFLHRA------- 548
Query: 399 KKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSL 458
TLRVG++++ +D ARR +HTATH+L+ ALR VLGP Q GSL
Sbjct: 549 -------KVEEGTLRVGERVRAVVDPARRD-TERHHTATHLLHAALRAVLGPHVRQAGSL 600
Query: 459 V 459
V
Sbjct: 601 V 601
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
++ L +VLPG A+RLYDTYGFP+DLT + E+G VD E ++ A ++ Q +
Sbjct: 385 LSGLRPGEVLPGAEAFRLYDTYGFPLDLTVEIAAERGFGVDTEGFKRAMEEQQERSRAAM 444
Query: 65 GMETSV 70
E +
Sbjct: 445 AFEREI 450
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 8/104 (7%)
Query: 20 WRLYDTYGFPVDLTQLMVEEK----GLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGG 75
W L D FPV L +EE +++ E Y + + + E G+E S E CGG
Sbjct: 631 WILAD---FPVTWRYLPLEEAKREGAMALFGEKYGEVVRVVRVEGSPLPGVE-SKELCGG 686
Query: 76 THLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQSHSGSIN 119
TH+ +G F I EEA++ G + + + G++N
Sbjct: 687 THVRRTGEIGAFLIQKEEAVSAGVRRLEAVAGEWAVRFARGALN 730
>gi|187924800|ref|YP_001896442.1| alanyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
gi|205830007|sp|B2SZN0.1|SYA_BURPP RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|187715994|gb|ACD17218.1| alanyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
Length = 874
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 70/136 (51%), Gaps = 27/136 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V V G +A ++LD + FYAE GGQ+ D+G + +
Sbjct: 479 VKEVRDGRQAVVVLDHTPFYAESGGQVGDQGVLANAS----------------------- 515
Query: 386 IFLQFSLSN-LKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
++F++S+ LK + +V TL TL+VGD +K ID RR NH+ATH+++ A
Sbjct: 516 --VRFAVSDTLKVQADVVGHHGTLEQGTLKVGDVVKAEIDAVRRARTARNHSATHLMHKA 573
Query: 444 LRFVLGPEADQKGSLV 459
LR VLG QKGSLV
Sbjct: 574 LREVLGSHVQQKGSLV 589
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGMETS 69
K L G++A++L+DTYGFP+DLT + E+ ++VD +++ A+++ Q+ + M
Sbjct: 387 KTLDGELAFKLHDTYGFPLDLTADVCREREVTVDEAAFDEAMARQREQARAAGKFKMAQG 446
Query: 70 VEFCG 74
+E+ G
Sbjct: 447 LEYSG 451
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVS 330
V D+ V+ L + V V G +A ++LD + FYAE GGQ+ D+G ++N +VS
Sbjct: 463 VFDDAKVIALYVDGASVKEVRDGRQAVVVLDHTPFYAESGGQVGDQGVLANASVRFAVS 521
>gi|400603042|gb|EJP70640.1| tRNA synthetase class II [Beauveria bassiana ARSEF 2860]
Length = 1052
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 71/128 (55%), Gaps = 25/128 (19%)
Query: 333 TEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPI-FLQFS 391
T G+LLD++NFYAE GGQI D G ++ ++D ++ ++ + N G Y L ++++
Sbjct: 618 TAIGLLLDQTNFYAESGGQIADTGRIV-IDDVAEFKVM--DVQNFGG--YVLHSGYIEYG 672
Query: 392 LSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPE 451
L GD++ D RR PI +NH+ THILNHALR VLG +
Sbjct: 673 -------------------ALSSGDEVICEYDELRRSPIRNNHSGTHILNHALREVLGDD 713
Query: 452 ADQKGSLV 459
+QKGSLV
Sbjct: 714 INQKGSLV 721
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/46 (65%), Positives = 36/46 (78%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
K L GDV WRLYDT+GFPVDLT+LM EE+GL +D E AK+KA+
Sbjct: 505 KKLDGDVVWRLYDTFGFPVDLTKLMAEERGLEIDEAEVEVAKEKAR 550
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 15/84 (17%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + G+ +D + +EP+ + SVEFCGGTH+
Sbjct: 780 ETYPNPVRVVSI-----GMDIDTML---------AEPKKADWRKYSVEFCGGTHVEQTGL 825
Query: 84 VGDFCISSEEAIAKG-SNIVSYCG 106
+ D I E IAKG I++Y G
Sbjct: 826 IKDLLIVEESGIAKGIRRIIAYTG 849
>gi|387771345|ref|ZP_10127511.1| alanine--tRNA ligase [Pasteurella bettyae CCUG 2042]
gi|386902550|gb|EIJ67390.1| alanine--tRNA ligase [Pasteurella bettyae CCUG 2042]
Length = 875
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 73/148 (49%), Gaps = 26/148 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDS+ SG A I+LD++ FY E GGQI D G Y
Sbjct: 480 VDSIQSGENAVIILDRTPFYGESGGQIGDTG-------------------------YIST 514
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F +++ +K ++ + L S L VG+ + +DT RR+ I +NH+ATH+L+ AL
Sbjct: 515 DLASFRINDTQKYGQVFGHIGQLQSGELSVGEIVSAQVDTERRKAITANHSATHLLHAAL 574
Query: 445 RFVLGPEADQKGSLVYRYHLHENIMECE 472
R VLG QKGSLV L + ++ E
Sbjct: 575 RKVLGDHVAQKGSLVSDSALRFDFIQPE 602
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETS 69
++ +L GDVA++LYDTYGFP+DLT + E+ +++D E + D + +AQ +QA +
Sbjct: 385 KNNMLSGDVAFKLYDTYGFPLDLTADVCRERNIAIDEEGF-DREMQAQ-RARAQANSNFN 442
Query: 70 VEF 72
V++
Sbjct: 443 VDY 445
Score = 46.6 bits (109), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
E VV L + + VDS+ SG A I+LD++ FY E GGQI D G++S
Sbjct: 467 EAKVVALFADGKSVDSIQSGENAVIILDRTPFYGESGGQIGDTGYIS 513
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
VDS+ SG A I+LD++ FY E GGQI D G++
Sbjct: 480 VDSIQSGENAVIILDRTPFYGESGGQIGDTGYI 512
>gi|300023633|ref|YP_003756244.1| alanyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
gi|299525454|gb|ADJ23923.1| alanyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
Length = 897
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 80/162 (49%), Gaps = 31/162 (19%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
++N + D++ +G E ++L+++ FY E GGQ+ D+G ++
Sbjct: 481 LVANGKDADTLKAGDEGALILNQTPFYGESGGQVGDQGV-------------------IK 521
Query: 379 GSKYALPIFLQFSLSNLKKK--KKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
G+K AL F +++ +KK V + + GD +++ +D ARR +NH+A
Sbjct: 522 GAKGAL-----FRVTDTQKKLGDLFVHFGKVEAGSFTAGDAVEIEVDHARRTATRANHSA 576
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
TH+L+ ALR VLG QKGSLV L H M EE
Sbjct: 577 THLLHEALRQVLGTHVAQKGSLVSPDRLRFDFSHTKPMSAEE 618
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 36/48 (75%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
++ A + + V PGDVA++LYDT+GFP+DLT+ ++ +G+SVD ++
Sbjct: 381 ESSASIKKGAVFPGDVAFKLYDTFGFPLDLTEDALKPRGISVDTNAFD 428
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQ 324
EG V L N + D++ +G E ++L+++ FY E GGQ+ D+G + +
Sbjct: 475 EGIVAALVANGKDADTLKAGDEGALILNQTPFYGESGGQVGDQGVIKGAK 524
>gi|359411305|ref|ZP_09203770.1| alanyl-tRNA synthetase [Clostridium sp. DL-VIII]
gi|357170189|gb|EHI98363.1| alanyl-tRNA synthetase [Clostridium sp. DL-VIII]
Length = 879
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 71/141 (50%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + F +S++ G +A I+ D + YAE GGQI D G + ND + ++ + N+
Sbjct: 474 LIEGEDFAESITEGNKAIIVTDVTPLYAEMGGQIGDTGVIF--NDRFKAKV-VDTKKNIG 530
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G K+V + LS L+VG+K+ L +D ARR I NHTATH
Sbjct: 531 G--------------------KIVHFVEVLSGELKVGEKVTLEVDKARRESIKKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL VLG Q GS V
Sbjct: 571 LLDKALVTVLGSHVHQAGSYV 591
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
K KVL G ++LYDT+GFP++LT+ ++E++GLS+D + + + K + S
Sbjct: 378 KENNEKVLKGADGFKLYDTFGFPMELTKEILEDEGLSLDEDAFHEEMKVQRDRARS 433
>gi|317157868|ref|XP_001826622.2| alanyl-tRNA synthetase, cytoplasmic [Aspergillus oryzae RIB40]
Length = 1015
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 25/135 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
+ + G + G++LD++NFYAEQGGQ D G ++ ++ ++++E+ L + Y L
Sbjct: 573 TEQIPEGDQLGLILDRTNFYAEQGGQENDTGRIV-IDGQAELEVGDVQLY----AGYVLH 627
Query: 386 I-FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F+++ +L VGD++ D RR PI +NHT THILN AL
Sbjct: 628 TGFMKYG-------------------SLSVGDEVICEYDELRRWPIRNNHTGTHILNFAL 668
Query: 445 RFVLGPEADQKGSLV 459
+ VLG +QKGSLV
Sbjct: 669 KEVLGDGVEQKGSLV 683
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQ 63
G+ K+ DV WRLYDT+GFPVDLT++M EE+GL +D +E+A+ +A+ + Q
Sbjct: 465 GDDKLHGADV-WRLYDTFGFPVDLTRIMAEERGLRIDDTEFEEARSRAKEASKGQ 518
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 24/34 (70%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ + G + G++LD++NFYAEQGGQ D G ++
Sbjct: 573 TEQIPEGDQLGLILDRTNFYAEQGGQENDTGRIV 606
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 288 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+ + G + G++LD++NFYAEQGGQ D G
Sbjct: 573 TEQIPEGDQLGLILDRTNFYAEQGGQENDTG 603
>gi|168820492|ref|ZP_02832492.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|409246496|ref|YP_006887200.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
gi|205342835|gb|EDZ29599.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Weltevreden str. HI_N05-537]
gi|320087230|emb|CBY96995.1| Alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Weltevreden str. 2007-60-3289-1]
Length = 876
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 75/135 (55%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ +++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEVINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHIGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + E I G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEVINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + V+ +++G EA ++LD++ FYAE GGQ+ D+G + F +V +
Sbjct: 468 GKVTALFVDGKAVEVINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAGFTFAVDDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 38.1 bits (87), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+ +++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEVINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|426197443|gb|EKV47370.1| hypothetical protein AGABI2DRAFT_192563, partial [Agaricus bisporus
var. bisporus H97]
Length = 954
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 77/147 (52%), Gaps = 38/147 (25%)
Query: 322 NKQFVDSVSS----GTEAGILLDKSNFYAEQGGQIYDEGFMI--GVNDESQIELWFSSLV 375
NK FV S + GT G+LLDK++FYAE GGQ YD G ++ GV D
Sbjct: 512 NKAFVSSTENIPGYGT-FGLLLDKTSFYAEAGGQEYDTGNIVIDGVAD------------ 558
Query: 376 NLEGSKYALPIFLQFSLSNLKKKKKLVKLLHT--LSH-TLRVGDKLKLHIDTARRRPIMS 432
F ++N++ K V LHT L + L VG+++ D RR P+ +
Sbjct: 559 --------------FEVTNVQVYKGYV--LHTGYLKYGALEVGNEVISSYDELRRWPLRN 602
Query: 433 NHTATHILNHALRFVLGPEADQKGSLV 459
NHT THILN +LR +LG DQKGSLV
Sbjct: 603 NHTGTHILNFSLREILGDHIDQKGSLV 629
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 41/63 (65%), Gaps = 2/63 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK--KKAQSEPESQAGMETS 69
++L G WRLYDTYGFPVDLT LM EE GL ++ + +++A+ K S+ ++ G+
Sbjct: 412 QLLDGKDVWRLYDTYGFPVDLTLLMAEEMGLGINQKEFDEAQAWSKEASKGPTKKGVSDM 471
Query: 70 VEF 72
V+
Sbjct: 472 VKL 474
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 42 LSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SN 100
+S++ +V E AK + E+ +TS+EFCGGTH+A + D + E IAKG
Sbjct: 697 VSLEYDVDEIAK-----DIENPKWRQTSIEFCGGTHVARTGDIKDIVVVEESGIAKGIRR 751
Query: 101 IVSYCGSKG 109
IV+ G +
Sbjct: 752 IVAVTGQEA 760
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 5/50 (10%)
Query: 273 NDEGTVVGLRYNKQFVDSVSS----GTEAGILLDKSNFYAEQGGQIYDEG 318
N T+ + +NK FV S + GT G+LLDK++FYAE GGQ YD G
Sbjct: 501 NITATIKAIFHNKAFVSSTENIPGYGT-FGLLLDKTSFYAEAGGQEYDTG 549
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 39/69 (56%), Gaps = 14/69 (20%)
Query: 212 GLGDLSQTKHTPFVKRLRFSYNKQFVDSVSS----GTEAGILLDKSNFYAEQGGQIYDEG 267
G G+++ T F +NK FV S + GT G+LLDK++FYAE GGQ YD G
Sbjct: 498 GTGNITATIKAIF-------HNKAFVSSTENIPGYGT-FGLLLDKTSFYAEAGGQEYDTG 549
Query: 268 FMI--GVND 274
++ GV D
Sbjct: 550 NIVIDGVAD 558
>gi|283782871|ref|YP_003373625.1| alanine--tRNA ligase [Gardnerella vaginalis 409-05]
gi|283441998|gb|ADB14464.1| alanine--tRNA ligase [Gardnerella vaginalis 409-05]
Length = 894
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 22/139 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+ K V SV++ I+LD++ FYAE+GGQI D+G +I +D+ I LE
Sbjct: 484 AGKGSVKSVTAPANVEIILDRTPFYAERGGQIADQGEII--SDDGAI---------LEVD 532
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
PI K +V TL VG + +ID RR + +HTATH L
Sbjct: 533 DVQRPI-----------KDLIVHSCRLTEGTLSVGAPVNTNIDQVRRAALARSHTATHTL 581
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR LGP+A Q+GS+V
Sbjct: 582 HKALREELGPQATQRGSVV 600
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
K V SV++ I+LD++ FYAE+GGQI D+G +I +D+G ++
Sbjct: 486 KGSVKSVTAPANVEIILDRTPFYAERGGQIADQGEII--SDDGAIL 529
>gi|154248002|ref|YP_001418960.1| alanyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
gi|205830288|sp|A7IMR0.1|SYA_XANP2 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|154162087|gb|ABS69303.1| alanyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
Length = 884
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 22/141 (15%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + VDS+++G + ++L+++ FYAE GGQ+ D G + G E
Sbjct: 472 LVRDGAVVDSLAAGEKGLVILNQTPFYAESGGQVGDIGRVSG-----------------E 514
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G A + Q L +L V + + TL+ G L L +D ARR + +NH+ATH
Sbjct: 515 GGVAAQVVATQKKLGDL-----FVHEVKVETGTLKRGTALVLEVDHARRAAVRANHSATH 569
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ ALR VLG QKGSLV
Sbjct: 570 LLHEALRRVLGDHVAQKGSLV 590
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 35/49 (71%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
PG+VA++LYDTYGFP+DLTQ + +G+SVD ++ A + ++E +
Sbjct: 383 FPGEVAFKLYDTYGFPLDLTQDALRARGISVDTTAFDAAMARQKAEARA 431
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 32/49 (65%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
EG V L + VDS+++G + ++L+++ FYAE GGQ+ D G +S +
Sbjct: 466 EGVVAALVRDGAVVDSLAAGEKGLVILNQTPFYAESGGQVGDIGRVSGE 514
>gi|170695494|ref|ZP_02886639.1| alanyl-tRNA synthetase [Burkholderia graminis C4D1M]
gi|170139685|gb|EDT07868.1| alanyl-tRNA synthetase [Burkholderia graminis C4D1M]
Length = 890
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 71/136 (52%), Gaps = 27/136 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V V+ G +A ++LD + FYAE GGQ+ D+G + +
Sbjct: 495 VQQVTHGQQAVVVLDHTPFYAESGGQVGDQGLLANAS----------------------- 531
Query: 386 IFLQFSLSN-LKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
++F++++ LK + +V TL TL+VGD +K ID RR NH+ATH+++ A
Sbjct: 532 --VRFAVADTLKVQADVVGHHGTLEQGTLKVGDVVKAEIDAVRRARTARNHSATHLMHKA 589
Query: 444 LRFVLGPEADQKGSLV 459
LR VLG QKGSLV
Sbjct: 590 LREVLGSHVQQKGSLV 605
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGMETS 69
K L G++A++L+DTYGFP+DLT + E+ ++VD +++ A+++ Q+ + M
Sbjct: 403 KTLDGELAFKLHDTYGFPLDLTADVCREREVTVDEAAFDEAMARQREQARAAGKFKMAQG 462
Query: 70 VEFCG 74
+E+ G
Sbjct: 463 LEYSG 467
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
V D+ VV L + V V+ G +A ++LD + FYAE GGQ+ D+G ++N
Sbjct: 479 VFDDAKVVALYVDGASVQQVTHGQQAVVVLDHTPFYAESGGQVGDQGLLAN 529
>gi|160880749|ref|YP_001559717.1| alanyl-tRNA synthetase [Clostridium phytofermentans ISDg]
gi|205829959|sp|A9KMW7.1|SYA1_CLOPH RecName: Full=Alanine--tRNA ligase 1; AltName: Full=Alanyl-tRNA
synthetase 1; Short=AlaRS 1
gi|160429415|gb|ABX42978.1| alanyl-tRNA synthetase [Clostridium phytofermentans ISDg]
Length = 879
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 25/142 (17%)
Query: 325 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYAL 384
D V G A I++D++ FYA GGQ D GF++G + E ++E + L+G +
Sbjct: 480 LTDEVVGGQTATIIVDETPFYATMGGQTADIGFIVGKDAEFEVE----DTIKLKGGR--- 532
Query: 385 PIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
V L T++ + +VG+ + L IDT +R+ I NH+ATH+L A
Sbjct: 533 -----------------VGHLGTVTKGSFKVGETVTLTIDTQKRQAIGKNHSATHLLQKA 575
Query: 444 LRFVLGPEADQKGSLVYRYHLH 465
LR VLG +Q GS V L
Sbjct: 576 LRNVLGSHVEQAGSFVTSERLR 597
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 13/94 (13%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSV 70
+K L G+ A++LYDTYGFP+DLT+ ++EEKG S+D E + KK Q + E+
Sbjct: 382 TKTLNGEDAFKLYDTYGFPLDLTKEILEEKGFSIDEEGF---KKAMQVQRETARSARAVT 438
Query: 71 EFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSY 104
+ G D I E A SN V Y
Sbjct: 439 NYMG----------ADASIYDEIDPAITSNFVGY 462
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 36/73 (49%), Gaps = 9/73 (12%)
Query: 203 SCGFIGSDTGLGDLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQ 262
+ F+G D +T HT + L + D V G A I++D++ FYA GGQ
Sbjct: 456 TSNFVGYD-------RTSHTSKISVL--TTETDLTDEVVGGQTATIIVDETPFYATMGGQ 506
Query: 263 IYDEGFMIGVNDE 275
D GF++G + E
Sbjct: 507 TADIGFIVGKDAE 519
>gi|358387653|gb|EHK25247.1| hypothetical protein TRIVIDRAFT_72371 [Trichoderma virens Gv29-8]
Length = 954
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 75/141 (53%), Gaps = 28/141 (19%)
Query: 323 KQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEG 379
K F+ S + + T G+LLDK+NFYAE GGQI D G ++ ++D +E + + G
Sbjct: 507 KAFIKSTKDIPANTAIGVLLDKTNFYAESGGQIADTGRIV-IDD--VVEFKVMDVQDFGG 563
Query: 380 SKYALPI-FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
Y L ++++ + L D++ + RR PI +NHT TH
Sbjct: 564 --YVLHSGYIEYGV-------------------LSTDDEVICEYEELRRSPIRNNHTGTH 602
Query: 439 ILNHALRFVLGPEADQKGSLV 459
ILNH+LR VLG + +QKGSLV
Sbjct: 603 ILNHSLREVLGDDVNQKGSLV 623
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%), Gaps = 3/60 (5%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVE 71
K L GDV WRLYDT+GFPVDLT+LM EE+GL +D + A++KA+ E+ ++ SV+
Sbjct: 407 KKLEGDVVWRLYDTFGFPVDLTKLMAEERGLDIDEDEVAVAREKAR---EASKAVKDSVQ 463
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 15/84 (17%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + G+ VD V ++P + + SVEFCGGTH+
Sbjct: 682 ETYPNPVRVVSI-----GMDVDTMV---------ADPTNAEWRKYSVEFCGGTHVDQTGL 727
Query: 84 VGDFCISSEEAIAKG-SNIVSYCG 106
+ D I E IAKG I++Y G
Sbjct: 728 IKDLIIVEESGIAKGIRRIIAYTG 751
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 27/40 (67%), Gaps = 3/40 (7%)
Query: 234 KQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
K F+ S + + T G+LLDK+NFYAE GGQI D G ++
Sbjct: 507 KAFIKSTKDIPANTAIGVLLDKTNFYAESGGQIADTGRIV 546
>gi|398810586|ref|ZP_10569401.1| alanine--tRNA ligase [Variovorax sp. CF313]
gi|398082763|gb|EJL73506.1| alanine--tRNA ligase [Variovorax sp. CF313]
Length = 874
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 77/162 (47%), Gaps = 38/162 (23%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V + G ++LD + FY+E GGQ+ D+G ++ EG
Sbjct: 479 VQELKEGQPGIVVLDTTPFYSESGGQVGDQGVLVA-----------------EG------ 515
Query: 386 IFLQFSLSNLKKKKKLVKLLH--TLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+QF + + +K K V H TL+VGD +K +DTARR M NH+ TH+++ A
Sbjct: 516 --VQFGVEDTQKIKADVFGHHGTQTQGTLKVGDAVKAAVDTARRAATMRNHSVTHLMHKA 573
Query: 444 LRFVLGPEADQKGSLV----YRYHL-------HENIMECEEE 474
LR VLG QKGSLV R+ H+ I+E E+
Sbjct: 574 LREVLGDHVQQKGSLVDADKTRFDFAHNAPVSHDQIVEIEKR 615
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 46/69 (66%), Gaps = 2/69 (2%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA--KKKAQSEPESQAGM 66
G +KVLPG+VA++L+DTYGFP+DL+ + E+G+SVD + A K+KA + M
Sbjct: 385 GGAKVLPGEVAFKLHDTYGFPLDLSADVCRERGVSVDEAGFNAAMEKQKAAGRAAGKFKM 444
Query: 67 ETSVEFCGG 75
+ +VE+ G
Sbjct: 445 DRNVEYAGA 453
>gi|308235922|ref|ZP_07666659.1| alanyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018 = JCM
11026]
Length = 894
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 70/139 (50%), Gaps = 22/139 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+ K V SVS+ ++LD++ FYAE GGQI D+G +I +D+ I LE
Sbjct: 484 AGKGAVKSVSAPANVEVILDRTPFYAESGGQIADQGEII--SDDGAI---------LEVD 532
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
PI K +V TL VG + +ID RR + +HTATH L
Sbjct: 533 DVQRPI-----------KDLIVHSCRLTEGTLSVGAPVNTNIDQVRRAALARSHTATHTL 581
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR LGP+A Q+GS+V
Sbjct: 582 HKALREELGPQATQRGSVV 600
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
K V SVS+ ++LD++ FYAE GGQI D+G +I +D+G ++
Sbjct: 486 KGAVKSVSAPANVEVILDRTPFYAESGGQIADQGEII--SDDGAIL 529
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD----MEVYEDAKKKAQSE 59
+ ++ G A+ L+DTYGFP++LT M E+G+ VD E+ + K +A+++
Sbjct: 387 DDPIVGGSDAFTLHDTYGFPIELTLEMAAEQGVKVDEAKFRELMSEQKGRARAD 440
>gi|297242856|ref|ZP_06926794.1| alanyl-tRNA synthetase [Gardnerella vaginalis AMD]
gi|296889067|gb|EFH27801.1| alanyl-tRNA synthetase [Gardnerella vaginalis AMD]
Length = 894
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 71/139 (51%), Gaps = 22/139 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+ K V SV++ ++LD++ FYAE+GGQI D+G +I +D+ I LE
Sbjct: 484 AGKGSVKSVTAPANVEVILDRTPFYAERGGQIADQGEII--SDDGAI---------LEVD 532
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
PI K +V TL VG + +ID RR + +HTATH L
Sbjct: 533 DVQRPI-----------KDLIVHSCRLTEGTLSVGSPVNTNIDQVRRAALARSHTATHTL 581
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR LGP+A Q+GS+V
Sbjct: 582 HKALREELGPQATQRGSVV 600
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 32/46 (69%), Gaps = 2/46 (4%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
K V SV++ ++LD++ FYAE+GGQI D+G +I +D+G ++
Sbjct: 486 KGSVKSVTAPANVEVILDRTPFYAERGGQIADQGEII--SDDGAIL 529
>gi|418937704|ref|ZP_13491311.1| alanyl-tRNA synthetase [Rhizobium sp. PDO1-076]
gi|375055571|gb|EHS51812.1| alanyl-tRNA synthetase [Rhizobium sp. PDO1-076]
Length = 886
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/161 (32%), Positives = 80/161 (49%), Gaps = 33/161 (20%)
Query: 312 GQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWF 371
GQI + + + VD+ S+G + I+++++ FY E GGQ+ D G +IG
Sbjct: 467 GQI--QAIVRDGAAVDAASAGEQVQIVVNQTPFYGESGGQMGDTGEIIG----------- 513
Query: 372 SSLVNLEGSKYALPIFLQFSLSNLKKKKK----LVKLLHTLSHTLRVGDKLKLHIDTARR 427
EG FSL +KK V + + +R G+ + L++D ARR
Sbjct: 514 ------EG----------FSLDVTDTQKKGEGLFVHIATVRNGVVRAGEAMTLNVDHARR 557
Query: 428 RPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLHENI 468
+ +NH+ATH+L+ ALR VLG QKGSLV L +I
Sbjct: 558 SRLRANHSATHLLHEALRDVLGTHVAQKGSLVAPERLRFDI 598
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQ 63
L + L G+ ++LYDTYGFP+DLTQ + +G+ VD+ + DA ++ ++E S
Sbjct: 377 LSQGDSLDGETVFKLYDTYGFPLDLTQDALRTRGIGVDITGFNDAMQRQKAEARSH 432
>gi|421081334|ref|ZP_15542248.1| Alanine--tRNA ligase [Pectobacterium wasabiae CFBP 3304]
gi|401704344|gb|EJS94553.1| Alanine--tRNA ligase [Pectobacterium wasabiae CFBP 3304]
Length = 875
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 80/160 (50%), Gaps = 35/160 (21%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM--IGVNDESQIELWFSSLVNLEG 379
N VD +++G EA ++L+++ FY E GGQ+ D+G + GVN
Sbjct: 476 NGNAVDQIAAGDEAVVILNETPFYGESGGQVGDQGELKNAGVN----------------- 518
Query: 380 SKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATH 438
F++ + +K + + + L+ TLRV D + ++D RR I NH+ATH
Sbjct: 519 ----------FAVQDTQKYGQAIGHVGKLTQGTLRVNDHVDANVDNQRRNRIRLNHSATH 568
Query: 439 ILNHALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
+L+ ALR VLG QKGSLV +L H M+ E+
Sbjct: 569 LLHAALRQVLGDHVAQKGSLVNDSYLRFDFSHTEAMKPEQ 608
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ +RLYDTYGFPVDLT + E+GL VD E +E A + +G
Sbjct: 389 TLDGETVFRLYDTYGFPVDLTADVCRERGLKVDEEGFESAMTAQRQRAREASGFGVDYNS 448
Query: 66 ---METSVEFCG 74
++ + FCG
Sbjct: 449 LIRVDENTPFCG 460
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
+ V+ L +N VD +++G EA ++L+++ FY E GGQ+ D+G + N
Sbjct: 467 QAKVIALYHNGNAVDQIAAGDEAVVILNETPFYGESGGQVGDQGELKN 514
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 11/65 (16%)
Query: 220 KHTPF---------VKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM- 269
++TPF K + +N VD +++G EA ++L+++ FY E GGQ+ D+G +
Sbjct: 454 ENTPFCGYEKTQQQAKVIALYHNGNAVDQIAAGDEAVVILNETPFYGESGGQVGDQGELK 513
Query: 270 -IGVN 273
GVN
Sbjct: 514 NAGVN 518
>gi|385304483|gb|EIF48501.1| cytoplasmic alanyl-trna synthetase [Dekkera bruxellensis AWRI1499]
Length = 993
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 75/144 (52%), Gaps = 32/144 (22%)
Query: 322 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+++FV+S + G + GI+L K+ FYAEQGGQ+ D G ++ ++
Sbjct: 546 DQKFVNSTEGLKEGZQIGIILSKTPFYAEQGGQVXDTGKLV-----------------ID 588
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHT 435
G +F++ N++ V LHT +L+VG+ + D RR + NHT
Sbjct: 589 GQ-------AEFNVENVQTYAGYV--LHTGYIEEGSLKVGESVIASYDETRRESLRHNHT 639
Query: 436 ATHILNHALRFVLGPEADQKGSLV 459
THILN ALR VLG DQKGSLV
Sbjct: 640 GTHILNFALRSVLGDSVDQKGSLV 663
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 31/42 (73%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK 53
K+L G WRLYDTYGFPVDLT+LM EE L +D E +E AK
Sbjct: 446 KMLSGKDVWRLYDTYGFPVDLTRLMAEEAXLKIDEEGFEKAK 487
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 265 DEGFMIGVND-EGTVVGLRYNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
D+ F ND E + + +++FV+S + G + GI+L K+ FYAEQGGQ+ D G
Sbjct: 526 DDQFKYTSNDVEADIQAIYVDQKFVNSTEGLKEGZQIGIILSKTPFYAEQGGQVXDTG 583
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 233 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+++FV+S + G + GI+L K+ FYAEQGGQ+ D G ++
Sbjct: 546 DQKFVNSTEGLKEGZQIGIILSKTPFYAEQGGQVXDTGKLV 586
>gi|384440321|ref|YP_005655045.1| alanyl-tRNA synthetase [Thermus sp. CCB_US3_UF1]
gi|359291454|gb|AEV16971.1| Alanyl-tRNA synthetase [Thermus sp. CCB_US3_UF1]
Length = 882
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 79/169 (46%), Gaps = 41/169 (24%)
Query: 305 NFYAEQG-------GQIYDEG----FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIY 353
YAE+G G + EG ++ Q + GTE ++LDK+ FYAE GGQI
Sbjct: 460 ELYAERGATEFLGYGALEGEGEVLALLAGDQSLAEAGPGTEVQVVLDKTPFYAEGGGQIG 519
Query: 354 DEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTL---SH 410
D G + +++E + LK ++ L LH
Sbjct: 520 DFGHLEWPGGRARVE------------------------TTLKAERGL--FLHRARVEEG 553
Query: 411 TLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
LRVGD+++ +D ARR +HTATH+L+ ALR VLGP Q GSLV
Sbjct: 554 VLRVGDRVRAVVDPARRD-TERHHTATHLLHAALRAVLGPHVRQAGSLV 601
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 38/66 (57%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
+A L +V+PG A+RLYDTYGFP+DLT + E+G VD + ++ A + Q +
Sbjct: 385 LAALKPGEVVPGAEAFRLYDTYGFPLDLTVEIAAERGFGVDTQGFQQALEAQQERSRAAM 444
Query: 65 GMETSV 70
E +
Sbjct: 445 AFEREI 450
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 254 NFYAEQGG-QIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGG 312
YAE+G + G + G EG V+ L Q + GTE ++LDK+ FYAE GG
Sbjct: 460 ELYAERGATEFLGYGALEG---EGEVLALLAGDQSLAEAGPGTEVQVVLDKTPFYAEGGG 516
Query: 313 QIYDEGFM 320
QI D G +
Sbjct: 517 QIGDFGHL 524
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 20 WRLYDTYGFPVDLTQLMVEEK----GLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGG 75
W + D FPV + +EE +++ E Y + + + E G+E S E CGG
Sbjct: 631 WIMAD---FPVTWRYMPLEEARKEGAMALFGEKYGEVVRVVRVEGSPLPGVE-SKELCGG 686
Query: 76 THLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
TH+ +G F I SEEA++ G I + G G + G
Sbjct: 687 THVRRTGEIGAFLIRSEEAVSAGVRRIEAVAGEPGVRLARQG 728
>gi|386742556|ref|YP_006215735.1| alanyl-tRNA synthetase [Providencia stuartii MRSN 2154]
gi|384479249|gb|AFH93044.1| alanyl-tRNA synthetase [Providencia stuartii MRSN 2154]
Length = 876
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 39/214 (18%)
Query: 258 EQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDE 317
E+ ++ +EGF + D+ ++ +S GT+ L+ K ++E G Y+E
Sbjct: 415 ERNIKVDEEGFERAMEDQ--------RRRARESSGFGTDYNSLI-KVEKHSEFSGYAYNE 465
Query: 318 GFMS------NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWF 371
+ N Q VDS+++G E ++LDK+ FYAE GGQ+ D G + ND
Sbjct: 466 QLATITAIYKNGQPVDSLNAGEEGLVILDKTAFYAESGGQVGDTGLL--RNDSG------ 517
Query: 372 SSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIM 431
S + + KY I ++ K + S +L + ++ ID RR I
Sbjct: 518 -SFIVTDTQKYGQAI------GHIGKVE---------SGSLVINHRIDAKIDVERRDAIR 561
Query: 432 SNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
NH+ATH+L+ ALR VLG QKGSLV +L
Sbjct: 562 LNHSATHLLHAALRQVLGEHVSQKGSLVNDKYLR 595
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMET 68
L G+ +RLYDTYGFP+DLT + E+ + VD E +E A + + +G T
Sbjct: 389 TLDGETVFRLYDTYGFPMDLTADVCRERNIKVDEEGFERAMEDQRRRARESSGFGT 444
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
N Q VDS+++G E ++LDK+ FYAE GGQ+ D G + ND G+ +
Sbjct: 476 NGQPVDSLNAGEEGLVILDKTAFYAESGGQVGDTGLL--RNDSGSFI 520
>gi|343518230|ref|ZP_08755224.1| alanine--tRNA ligase [Haemophilus pittmaniae HK 85]
gi|343394026|gb|EGV06576.1| alanine--tRNA ligase [Haemophilus pittmaniae HK 85]
Length = 813
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 72/135 (53%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDS+SSG +A I+L+ + FYAE GGQ+ D+G +
Sbjct: 479 VDSISSGEQAVIVLENTPFYAESGGQVGDKGHLTAQG----------------------- 515
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
++F++ + +K ++ + TL TL VG + +D ARR+ I NH+ATH+L+ AL
Sbjct: 516 --IKFNVLDTQKYGQVFGHIGTLEQGTLSVGQTINAVVDDARRQKISLNHSATHLLHAAL 573
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 574 RQVLGQHVVQKGSLV 588
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 6/59 (10%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED----AKKKAQSEPESQAGME 67
+L G+VA++LYDTYGFP+DLT + E+ + VD +E +K+AQS SQ GM+
Sbjct: 388 ILSGEVAFKLYDTYGFPLDLTADVCRERNIQVDESGFEREMEAQRKRAQS--ASQFGMD 444
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 32/48 (66%), Gaps = 7/48 (14%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYN 284
VDS+SSG +A I+L+ + FYAE GGQ+ D+G + T G+++N
Sbjct: 479 VDSISSGEQAVIVLENTPFYAESGGQVGDKGHL-------TAQGIKFN 519
Score = 41.6 bits (96), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 27/34 (79%)
Query: 288 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
VDS+SSG +A I+L+ + FYAE GGQ+ D+G ++
Sbjct: 479 VDSISSGEQAVIVLENTPFYAESGGQVGDKGHLT 512
>gi|183596274|ref|ZP_02958302.1| hypothetical protein PROSTU_00005 [Providencia stuartii ATCC 25827]
gi|188023874|gb|EDU61914.1| alanine--tRNA ligase [Providencia stuartii ATCC 25827]
Length = 876
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 102/214 (47%), Gaps = 39/214 (18%)
Query: 258 EQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDE 317
E+ ++ +EGF + D+ ++ +S GT+ L+ K ++E G Y+E
Sbjct: 415 ERNIKVDEEGFERAMEDQ--------RRRARESSGFGTDYNSLI-KVEKHSEFSGYAYNE 465
Query: 318 GFMS------NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWF 371
+ N Q VDS+++G E ++LDK+ FYAE GGQ+ D G + ND
Sbjct: 466 QLATITAIYKNGQPVDSLNAGEEGLVILDKTAFYAESGGQVGDTGLL--RNDSG------ 517
Query: 372 SSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIM 431
S + + KY I ++ K + S +L + ++ ID RR I
Sbjct: 518 -SFIVTDTQKYGQAI------GHIGKVE---------SGSLVINHRIDAKIDVERRDAIR 561
Query: 432 SNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
NH+ATH+L+ ALR VLG QKGSLV +L
Sbjct: 562 LNHSATHLLHAALRQVLGEHVSQKGSLVNDKYLR 595
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMET 68
L G+ +RLYDTYGFP+DLT + E+ + VD E +E A + + +G T
Sbjct: 389 TLDGETVFRLYDTYGFPMDLTADVCRERNIKVDEEGFERAMEDQRRRARESSGFGT 444
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%), Gaps = 2/47 (4%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV 279
N Q VDS+++G E ++LDK+ FYAE GGQ+ D G + ND G+ +
Sbjct: 476 NGQPVDSLNAGEEGLVILDKTAFYAESGGQVGDTGLL--RNDSGSFI 520
>gi|224584605|ref|YP_002638403.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|224469132|gb|ACN46962.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
Length = 876
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 74/135 (54%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ +++G EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEVINAGQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ +K + + L LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDATQKYGQAIGHLGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 60/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++++ EF G HL + V + + E I G V
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLELNGKVTALFVDGKAVEVINAGQEAVVVLDQTPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + V+ +++G EA ++LD++ FYAE GGQ+ D+G + F +V + +
Sbjct: 468 GKVTALFVDGKAVEVINAGQEAVVVLDQTPFYAESGGQVGDKGELKGAGFTFAVDATQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
Score = 38.1 bits (87), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 27/36 (75%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
V+ +++G EA ++LD++ FYAE GGQ+ D+G + G
Sbjct: 480 VEVINAGQEAVVVLDQTPFYAESGGQVGDKGELKGA 515
>gi|374339095|ref|YP_005095831.1| alanine--tRNA ligase [Marinitoga piezophila KA3]
gi|372100629|gb|AEX84533.1| alanine--tRNA ligase [Marinitoga piezophila KA3]
Length = 868
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 117/267 (43%), Gaps = 56/267 (20%)
Query: 224 FVKRLRFSYNKQFVDSVSSGTEAGI------------------LLDKSNFYAEQGGQIYD 265
F+K++ + K+F++++ GTE I L D F + +I +
Sbjct: 346 FIKKIVETEEKRFLETLDKGTEKLINYMKNTENKIIDGEFAFELYDTYGFPLDITKEIAE 405
Query: 266 E-GFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGG--------QIYD 316
E GF G+++EG + K+ + E + F ++ +I D
Sbjct: 406 ENGF--GIDEEGFNKQMELQKKRAREAAGEKEYAKMNPAYKFVGDEIKTTDFTGYEKIED 463
Query: 317 EG----FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFS 372
EG + ++ +DS G E ++ +K+ FYAE+GGQI D G + G E E+ +
Sbjct: 464 EGEILYIIKEEEIIDSAGEGEEVVVITNKTPFYAEKGGQIGDTGIIKGAGFE--FEVKDT 521
Query: 373 SLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMS 432
++N E + F + L ++ +K KL I+ RR+ I
Sbjct: 522 KIINNE-------VIGHFGVVKL--------------GIIKRNEKAKLIINKERRQNIKR 560
Query: 433 NHTATHILNHALRFVLGPEADQKGSLV 459
NHTATH+L+ ALR VLG Q GSLV
Sbjct: 561 NHTATHLLHKALREVLGTHVKQAGSLV 587
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 59/130 (45%), Gaps = 20/130 (15%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD-------MEVYEDAKKKAQSEPES 62
E+K++ G+ A+ LYDTYGFP+D+T+ + EE G +D ME+ + ++A E E
Sbjct: 377 ENKIIDGEFAFELYDTYGFPLDITKEIAEENGFGIDEEGFNKQMELQKKRAREAAGEKEY 436
Query: 63 QAGMETSVEFCGG----THLAMAHHVGD-----FCISSEEAI---AKGSNIVSYCGSKGT 110
A M + +F G T + D + I EE I +G +V
Sbjct: 437 -AKMNPAYKFVGDEIKTTDFTGYEKIEDEGEILYIIKEEEIIDSAGEGEEVVVITNKTPF 495
Query: 111 FQSHSGSIND 120
+ G I D
Sbjct: 496 YAEKGGQIGD 505
>gi|399050734|ref|ZP_10740778.1| alanine--tRNA ligase [Brevibacillus sp. CF112]
gi|433545189|ref|ZP_20501549.1| alanyl-tRNA synthetase [Brevibacillus agri BAB-2500]
gi|398051450|gb|EJL43772.1| alanine--tRNA ligase [Brevibacillus sp. CF112]
gi|432183578|gb|ELK41119.1| alanyl-tRNA synthetase [Brevibacillus agri BAB-2500]
Length = 882
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 99/217 (45%), Gaps = 32/217 (14%)
Query: 254 NFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVS-SGTEAGILLDKSNF--YAEQ 310
+F EQG + +GF + ++ R +Q VDS+ G L S F Y E
Sbjct: 408 DFANEQGLTVDRDGFEQAMEEQRERA--RAARQDVDSMQIQGGPLSELTVTSEFVGYTEL 465
Query: 311 GGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELW 370
E + + Q D G ++LD++ FYAE GGQI DEG+++ + ++++
Sbjct: 466 VATGKVEAIILDNQLADEAEEGQTVQVILDQTPFYAESGGQINDEGYLLSDSVKARV--- 522
Query: 371 FSSLVNLEGSKYALPIFLQFSLSNLKK--KKKLVKLLHTLSHTLRVGDKLKLHIDTARRR 428
++++K K + V + + TLR GD ++ ++ R
Sbjct: 523 ----------------------TDVQKGPKGQNVHSVIIEAGTLRKGDTVRAEVNREARL 560
Query: 429 PIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
I NHTATH+L+ AL+ VLG +Q GSLV L
Sbjct: 561 AITKNHTATHLLHQALKDVLGTHVNQAGSLVAPERLR 597
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 17/137 (12%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA----KKKA 56
M++ + G+S+ L G +++YDTYGFPVDLT+ E+GL+VD + +E A +++A
Sbjct: 375 MVKAAKESGQSQ-LSGQDVFKMYDTYGFPVDLTEDFANEQGLTVDRDGFEQAMEEQRERA 433
Query: 57 QSEPESQAGME----------TSVEFCGGTHLAMAHHVGDFCISSEEA--IAKGSNIVSY 104
++ + M+ + EF G T L V + ++ A +G +
Sbjct: 434 RAARQDVDSMQIQGGPLSELTVTSEFVGYTELVATGKVEAIILDNQLADEAEEGQTVQVI 493
Query: 105 CGSKGTFQSHSGSINDE 121
+ G INDE
Sbjct: 494 LDQTPFYAESGGQINDE 510
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVS 292
+ Q D G ++LD++ FYAE GGQI DEG+++ + + V ++ + + S
Sbjct: 477 DNQLADEAEEGQTVQVILDQTPFYAESGGQINDEGYLLSDSVKARVTDVQKGPKGQNVHS 536
Query: 293 SGTEAGILLDKSNFYAE 309
EAG L AE
Sbjct: 537 VIIEAGTLRKGDTVRAE 553
>gi|426401423|ref|YP_007020395.1| alanyl-tRNA synthetase [Candidatus Endolissoclinum patella L2]
gi|425858091|gb|AFX99127.1| alanyl-tRNA synthetase [Candidatus Endolissoclinum patella L2]
Length = 888
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 77/141 (54%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ NKQ V S+ SG + +++++++FYAE GGQI D G M + ++L +
Sbjct: 473 IVDNKQ-VSSIHSGIDVLVVVNQTSFYAESGGQIGDTGIMRTSSG--------ATLTVTD 523
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
K +F+ ++SN S +++GD +++ +D RR + +NH+ATH
Sbjct: 524 TKKKFGDLFVHVAISN--------------SGIIKIGDSVEMLVDIDRRDRVRANHSATH 569
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ ALR LG E QKGSLV
Sbjct: 570 LLHEALRRRLGCEVAQKGSLV 590
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD 45
KLG + L G+ A++LYDTYGFP+DLT ++ +G S+D
Sbjct: 376 KLGFGQPLSGEFAFKLYDTYGFPLDLTSDILRGQGRSLD 414
>gi|443893907|dbj|GAC71363.1| alanyl-trna synthetase [Pseudozyma antarctica T-34]
Length = 1056
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 65/124 (52%), Gaps = 23/124 (18%)
Query: 336 GILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNL 395
GILLD++ YAE GGQ D G I ++ +SQ + + + S Y L I
Sbjct: 608 GILLDRTCLYAESGGQQADTG-SITIDGKSQFVVEDAQVF----SGYVLHIG-------- 654
Query: 396 KKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQK 455
H + L +GDK+ + D +RR P+ SNHTATHILN LR VLG DQK
Sbjct: 655 ----------HLVRGELALGDKVTVSYDQSRRAPLQSNHTATHILNFGLREVLGDHIDQK 704
Query: 456 GSLV 459
GSLV
Sbjct: 705 GSLV 708
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETS 69
SK L G W+LYDT+GFPVDLT +M EE GL V+ + +E A +A+S+ S+AG + S
Sbjct: 489 SKQLSGADVWKLYDTFGFPVDLTLIMAEEHGLGVNEKEFEAA--QAESKELSKAGGKKS 545
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
S+ E+ TSVEFCGGTH+A +GDF I+ E IAKG I++ G +
Sbjct: 787 SDLENPRWRSTSVEFCGGTHVAKTGEIGDFVITEESGIAKGIRRIIAVTGDEA 839
>gi|389844995|ref|YP_006347075.1| alanyl-tRNA synthetase [Mesotoga prima MesG1.Ag.4.2]
gi|387859741|gb|AFK07832.1| alanyl-tRNA synthetase [Mesotoga prima MesG1.Ag.4.2]
Length = 869
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 103/237 (43%), Gaps = 49/237 (20%)
Query: 230 FSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQ-------IYDEGFMIGVNDEGTVVGLR 282
+ + + V+ + +GT G+ LDK + E Q + D ++ V T+ +
Sbjct: 394 YGFPLELVEEIVAGT--GVTLDKEGYEREMALQRERAREAMGDREYLSNVEAYSTIFPVT 451
Query: 283 YNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKS 342
N +F T DKS A I EG V+++S G ++ +K+
Sbjct: 452 GNSKF-------TGYSRFEDKSKIVA-----ILKEG-----DAVETLSKGETGDLIFEKT 494
Query: 343 NFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLV 402
FY E+GGQ+ D G + N +++E +F+ + ++ +V
Sbjct: 495 PFYPERGGQVTDTGLIRTDNASAKVER----------------VFIPY-------QEMIV 531
Query: 403 KLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
L VGDK L +D RR+ I NHTATH+L+ ALR VLG Q GSLV
Sbjct: 532 HRAFVEEGALHVGDKAWLSVDEDRRKAITRNHTATHLLHAALRKVLGEHVHQSGSLV 588
>gi|421781729|ref|ZP_16218194.1| alanine--tRNA ligase [Serratia plymuthica A30]
gi|407756295|gb|EKF66413.1| alanine--tRNA ligase [Serratia plymuthica A30]
Length = 875
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 70/143 (48%), Gaps = 26/143 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q VD + G EA ++LD++ FY E GGQ+ D+G + +
Sbjct: 478 QPVDEIHVGEEAVVVLDETPFYGESGGQVGDKGVLKAAGAD------------------- 518
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +S+ +K + + LSH L+V D++ ID ARR I NH+ATH+L+
Sbjct: 519 ------FVVSDTQKYGQAIGHQGKLSHGVLKVKDRVDAQIDIARRNRIRLNHSATHLLHA 572
Query: 443 ALRFVLGPEADQKGSLVYRYHLH 465
ALR LG QKGSLV +L
Sbjct: 573 ALRQTLGEHVAQKGSLVNDKYLR 595
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+ L G+ A+RLYDTYGFPVDLT + E+GL VD +E A + + +G
Sbjct: 386 QGDTLDGEAAFRLYDTYGFPVDLTADVCRERGLKVDEAGFEQAMEAQRRRARESSG 441
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
+ TV L + Q VD + G EA ++LD++ FY E GGQ+ D+G +
Sbjct: 467 QATVTALFRDGQPVDEIHVGEEAVVVLDETPFYGESGGQVGDKGVL 512
>gi|260599084|ref|YP_003211655.1| alanyl-tRNA synthetase [Cronobacter turicensis z3032]
gi|260218261|emb|CBA33198.1| Alanyl-tRNA synthetase [Cronobacter turicensis z3032]
Length = 875
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ V++G +A ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEQVAAGQQAVVVLDETPFYAESGGQVGDKG-------------------ELKGNGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++++ +K + + + L S L+VG+ +K +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FTVNDTQKYGQAIGHIGELTSGVLKVGEGVKAEVDQARRERIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-TGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGT 110
+G ++ + EF G + V I S E +A G V
Sbjct: 439 SSGFGADYNAMIRVDGASEFKGYDQTELTARVTALFIDGKSVEQVAAGQQAVVVLDETPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAG 336
V L + + V+ V++G +A ++LD++ FYAE GGQ+ D+G + F +V+ + G
Sbjct: 470 VTALFIDGKSVEQVAAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFTVNDTQKYG 528
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 6/44 (13%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDE------GFMIGVND 274
V+ V++G +A ++LD++ FYAE GGQ+ D+ GF VND
Sbjct: 480 VEQVAAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFTVND 523
>gi|238761735|ref|ZP_04622710.1| Alanyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
gi|238700249|gb|EEP92991.1| Alanyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
Length = 847
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 73/149 (48%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N + VD + G EA ++L+++ FY E GGQ+ D+G L N
Sbjct: 444 ALFRNGEAVDEIHEGEEAVVVLNQTPFYGESGGQVGDKG----------------ELKNA 487
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+ F++++ +K + + L L+H TLRV + +D ARR I NH+A
Sbjct: 488 TAT---------FAVADTQKYGQAIGHLGQLTHGTLRVNHSIDAQVDVARRNRIRLNHSA 538
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR LG QKGSLV +L
Sbjct: 539 THLLHAALRKTLGDHVAQKGSLVNDKYLR 567
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 18/145 (12%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ L VD +E A + + +G
Sbjct: 361 TLDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSGFGADYNS 420
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++++ +F G H+ V + E + I +G V + G + D
Sbjct: 421 LIRVDSASQFSGYDHVQQQATVTALFRNGEAVDEIHEGEEAVVVLNQTPFYGESGGQVGD 480
Query: 121 --EMVNKYPSLYRLFRTVHKQKYVQ 143
E+ N + F QKY Q
Sbjct: 481 KGELKNATAT----FAVADTQKYGQ 501
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
V + TV L N + VD + G EA ++L+++ FY E GGQ+ D+G + N
Sbjct: 436 VQQQATVTALFRNGEAVDEIHEGEEAVVVLNQTPFYGESGGQVGDKGELKN 486
>gi|433551249|ref|ZP_20507292.1| Alanyl-tRNA synthetase [Yersinia enterocolitica IP 10393]
gi|431788348|emb|CCO70332.1| Alanyl-tRNA synthetase [Yersinia enterocolitica IP 10393]
Length = 838
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N + VD + G EA ++L+++ FY E GGQ+ D G L N
Sbjct: 435 ALFRNGEAVDEIHEGEEAVVVLNQTPFYGESGGQVGDTG----------------ELKNA 478
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+ F++++ +K + + L L+H TLRV + ID ARR I NH+A
Sbjct: 479 TAT---------FAVADTQKYGQAIGHLGQLAHGTLRVNHSIDAQIDVARRNRIRLNHSA 529
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR LG QKGSLV +L
Sbjct: 530 THLLHAALRKTLGDHVAQKGSLVNDKYLR 558
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
L G+ A+RLYDTYGFPVDLT + E+ L VD +E A + + +G
Sbjct: 352 TLDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSG 404
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
V+ + TV L N + VD + G EA ++L+++ FY E GGQ+ D G + N
Sbjct: 427 VHQQATVTALFRNGEAVDEIHEGEEAVVVLNQTPFYGESGGQVGDTGELKN 477
>gi|227329399|ref|ZP_03833423.1| alanyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 875
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 80/158 (50%), Gaps = 31/158 (19%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N VD +++G EA ++L+++ FY E GGQ+ D+G +
Sbjct: 476 NGNAVDQIAAGDEAVVILNETPFYGESGGQVGDQGELKNAG------------------- 516
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
+ F++ + +K + + + L+ TLRV D ++ ++D+ RR I NH+ATH+L
Sbjct: 517 ------VSFAVQDTQKYGQAIGHVGKLTRGTLRVNDSVEANVDSQRRDRIRLNHSATHLL 570
Query: 441 NHALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
+ ALR VLG QKGSLV +L H M+ E+
Sbjct: 571 HAALRQVLGDHVAQKGSLVNDSYLRFDFSHTEAMKPEQ 608
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+GL VD E +E A + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERGLKVDEEGFEAAMTAQRQRAREASGFGVDYNS 448
Query: 66 ---METSVEFCG 74
++ + FCG
Sbjct: 449 LIRVDENTPFCG 460
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 32/48 (66%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
+ V+ + +N VD +++G EA ++L+++ FY E GGQ+ D+G + N
Sbjct: 467 QAKVIAIYHNGNAVDQIAAGDEAVVILNETPFYGESGGQVGDQGELKN 514
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 9/57 (15%)
Query: 220 KHTPF---------VKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 267
++TPF K + +N VD +++G EA ++L+++ FY E GGQ+ D+G
Sbjct: 454 ENTPFCGYEKTQQQAKVIAIYHNGNAVDQIAAGDEAVVILNETPFYGESGGQVGDQG 510
>gi|258575517|ref|XP_002541940.1| alanyl-tRNA synthetase [Uncinocarpus reesii 1704]
gi|237902206|gb|EEP76607.1| alanyl-tRNA synthetase [Uncinocarpus reesii 1704]
Length = 931
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/140 (37%), Positives = 72/140 (51%), Gaps = 23/140 (16%)
Query: 323 KQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEG 379
K+FV S +S+G + GI+LDK+NFYAEQGGQ YD G +I ++G
Sbjct: 491 KEFVASTNGISAGEQIGIILDKTNFYAEQGGQEYDIGKII-----------------VDG 533
Query: 380 SKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHI 439
+ + QF + L+ K L + +L + +R + +NHT THI
Sbjct: 534 HR---GVTFQFGVPFLRPFVFYAKQARQLPQATDGKLQERLLLTRPQRHEVSNNHTGTHI 590
Query: 440 LNHALRFVLGPEADQKGSLV 459
LN ALR VLG DQKGSLV
Sbjct: 591 LNFALREVLGNGIDQKGSLV 610
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 41/59 (69%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
AK S L G WRLYDT+GFPVDLTQLM EE+GLS+D +E+A+ KA+ + QA
Sbjct: 386 AKESGSGKLHGADVWRLYDTFGFPVDLTQLMAEERGLSIDNTEFEEARLKAKEASKGQA 444
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 9/85 (10%)
Query: 273 NDEGTVVGLRYNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSV 329
N + ++ + + K+FV S +S+G + GI+LDK+NFYAEQGGQ YD G K VD
Sbjct: 479 NIQSQILSIYHGKEFVASTNGISAGEQIGIILDKTNFYAEQGGQEYDIG----KIIVDGH 534
Query: 330 SSGT-EAGI-LLDKSNFYAEQGGQI 352
T + G+ L FYA+Q Q+
Sbjct: 535 RGVTFQFGVPFLRPFVFYAKQARQL 559
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/46 (54%), Positives = 33/46 (71%), Gaps = 3/46 (6%)
Query: 228 LRFSYNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
L + K+FV S +S+G + GI+LDK+NFYAEQGGQ YD G +I
Sbjct: 485 LSIYHGKEFVASTNGISAGEQIGIILDKTNFYAEQGGQEYDIGKII 530
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 57/130 (43%), Gaps = 15/130 (11%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + G+ +D E+ +D K +P + S+EFCGGTH+
Sbjct: 669 ETYPDPVRVVSV-----GVELD-EILKDVK-----DPRWKG---VSIEFCGGTHVQKTGD 714
Query: 84 VGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGSINDEMVNKYPSLYRLFRTVHKQKYV 142
+ D I E IAKG I++ G E +NK+ + + + + K V
Sbjct: 715 IKDLVILEESGIAKGIRRIIAVTGKDAHEVQRIAREFGERLNKFEKMEQGPQKEQEAKLV 774
Query: 143 QDALNVSCLS 152
Q LN +S
Sbjct: 775 QVDLNQLSIS 784
>gi|395793296|ref|ZP_10472701.1| alanyl-tRNA synthetase [Bartonella vinsonii subsp. arupensis
Pm136co]
gi|395431610|gb|EJF97628.1| alanyl-tRNA synthetase [Bartonella vinsonii subsp. arupensis
Pm136co]
Length = 887
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 69/138 (50%), Gaps = 27/138 (19%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
VD +SSG +A ++++++ FY E GGQI D G + G N
Sbjct: 477 HIVDHISSGQKAVLVVNQTPFYGESGGQIGDSGIISGEN--------------------- 515
Query: 384 LPIFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
F + + +KK V + S + D ++L +D+ RR+ I +NH+ATH+L+
Sbjct: 516 ----FVFEVHDTQKKADGVFVHIGEVKSGQAKTSDCVELIVDSVRRKKIRANHSATHLLH 571
Query: 442 HALRFVLGPEADQKGSLV 459
ALR VLGP QKGS V
Sbjct: 572 EALRQVLGPHVTQKGSFV 589
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 38/55 (69%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
L E G++A++LYDTYGFP+DLTQ + +G+SVD++ ++ A ++ + E +
Sbjct: 377 LKEGDYFSGEIAFKLYDTYGFPLDLTQDALRCRGISVDVDAFDKAMERQKEEARA 431
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFV 326
EG + L Y+ VD +SSG +A ++++++ FY E GGQI D G +S + FV
Sbjct: 466 EGILTALVYDGHIVDHISSGQKAVLVVNQTPFYGESGGQIGDSGIISGENFV 517
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 232 YNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
Y+ VD +SSG +A ++++++ FY E GGQI D G + G N
Sbjct: 474 YDGHIVDHISSGQKAVLVVNQTPFYGESGGQIGDSGIISGEN 515
>gi|422009862|ref|ZP_16356844.1| alanyl-tRNA ligase [Providencia rettgeri Dmel1]
gi|414092035|gb|EKT53714.1| alanyl-tRNA ligase [Providencia rettgeri Dmel1]
Length = 875
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 105/215 (48%), Gaps = 41/215 (19%)
Query: 258 EQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDE 317
E+ ++ +EGF + D+ ++ +S G + L+ K + +E G YDE
Sbjct: 415 ERNIKVDEEGFERAMEDQ--------RRRARESSGFGADYNSLI-KVDKRSEFSGYQYDE 465
Query: 318 ------GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWF 371
+ Q VDS+++G E ++LDK+ FYAE GGQ+ D G++ N++S
Sbjct: 466 QQATITALYKDGQPVDSLNAGEEGLVILDKTAFYAESGGQVGDTGYL---NNDSA----- 517
Query: 372 SSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPI 430
F +++ +K + + + + + +L V ++ +D+ARR I
Sbjct: 518 -----------------SFKVTDTQKYGQAIGHIGKVEAGSLVVNHRITAFVDSARRDAI 560
Query: 431 MSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
NH+ATH+L+ ALR VLG QKGSLV +L
Sbjct: 561 RLNHSATHLLHAALRQVLGDHVSQKGSLVNDKYLR 595
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
L G+ A+RLYDTYGFP+DLT + E+ + VD E +E A + + +G
Sbjct: 389 TLDGEAAFRLYDTYGFPIDLTADVCRERNIKVDEEGFERAMEDQRRRARESSG 441
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 27/35 (77%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
Q VDS+++G E ++LDK+ FYAE GGQ+ D G++
Sbjct: 478 QPVDSLNAGEEGLVILDKTAFYAESGGQVGDTGYL 512
>gi|330863734|emb|CBX73834.1| alanyl-tRNA synthetase [Yersinia enterocolitica W22703]
Length = 875
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N + VD + G EA ++L+++ FY E GGQ+ D G L N
Sbjct: 472 ALFRNGEAVDEIHEGEEAVVVLNQTPFYGESGGQVGDTG----------------ELKNA 515
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+ F++++ +K + + L L+H TLRV + ID ARR I NH+A
Sbjct: 516 TAT---------FAVADTQKYGQAIGHLGQLAHGTLRVNHSIDAQIDAARRNRIRLNHSA 566
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR LG QKGSLV +L
Sbjct: 567 THLLHAALRKTLGDHVAQKGSLVNDKYLR 595
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
L G+ A+RLYDTYGFPVDLT + E+ L VD +E A + + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSG 441
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
V+ + TV L N + VD + G EA ++L+++ FY E GGQ+ D G + N
Sbjct: 464 VHQQATVTALFRNGEAVDEIHEGEEAVVVLNQTPFYGESGGQVGDTGELKN 514
>gi|332160302|ref|YP_004296879.1| alanyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|325664532|gb|ADZ41176.1| alanyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
Length = 838
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N + VD + G EA ++L+++ FY E GGQ+ D G L N
Sbjct: 435 ALFRNGEAVDEIHEGEEAVVVLNQTPFYGESGGQVGDTG----------------ELKNA 478
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+ F++++ +K + + L L+H TLRV + ID ARR I NH+A
Sbjct: 479 TAT---------FAVADTQKYGQAIGHLGQLAHGTLRVNHSIDAQIDAARRNRIRLNHSA 529
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR LG QKGSLV +L
Sbjct: 530 THLLHAALRKTLGDHVAQKGSLVNDKYLR 558
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
L G+ A+RLYDTYGFPVDLT + E+ L VD +E A + + +G
Sbjct: 352 TLDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSG 404
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
V+ + TV L N + VD + G EA ++L+++ FY E GGQ+ D G + N
Sbjct: 427 VHQQATVTALFRNGEAVDEIHEGEEAVVVLNQTPFYGESGGQVGDTGELKN 477
>gi|386309659|ref|YP_006005715.1| alanyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
Y11]
gi|418243751|ref|ZP_12870208.1| alanyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|318604467|emb|CBY25965.1| alanyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
Y11]
gi|351776753|gb|EHB19045.1| alanyl-tRNA synthetase [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
Length = 875
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N + VD + G EA ++L+++ FY E GGQ+ D G L N
Sbjct: 472 ALFRNGEAVDEIHEGEEAVVVLNQTPFYGESGGQVGDTG----------------ELKNA 515
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+ F++++ +K + + L L+H TLRV + ID ARR I NH+A
Sbjct: 516 TAT---------FAVADTQKYGQAIGHLGQLAHGTLRVNHSIDAQIDVARRNRIRLNHSA 566
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR LG QKGSLV +L
Sbjct: 567 THLLHAALRKTLGDHVAQKGSLVNDKYLR 595
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
L G+ A+RLYDTYGFPVDLT + E+ L VD +E A + + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSG 441
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
V+ + TV L N + VD + G EA ++L+++ FY E GGQ+ D G + N
Sbjct: 464 VHQQATVTALFRNGEAVDEIHEGEEAVVVLNQTPFYGESGGQVGDTGELKN 514
>gi|312115730|ref|YP_004013326.1| alanyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
gi|311220859|gb|ADP72227.1| alanyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
Length = 894
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 75/150 (50%), Gaps = 28/150 (18%)
Query: 312 GQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWF 371
GQI + + + V + +G E ++L+++ FY E GGQ+ D G +I
Sbjct: 467 GQIV--AIVKDGKPVKQLKTGEEGILILNQTPFYGESGGQVGDRGVIIA----------- 513
Query: 372 SSLVNLEGSKYALPIFLQFSLSNLKKK-KKLVKLLHTLSH-TLRVGDKLKLHIDTARRRP 429
P F +S +KK KL + T+ L+VGD +++ +D ARR
Sbjct: 514 -------------PKSAHFDVSETQKKLGKLFAHVGTVKKGPLKVGDAVEMQVDHARRTA 560
Query: 430 IMSNHTATHILNHALRFVLGPEADQKGSLV 459
I +NH+ATH+L+ ALR LG QKGSLV
Sbjct: 561 IRANHSATHLLHEALRETLGTHVTQKGSLV 590
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 36/52 (69%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
LG GDVA++LYDTYGFP+DLTQ ++ + +SVD++ + A + ++E
Sbjct: 377 LGAGDTFSGDVAFKLYDTYGFPLDLTQDALKARSISVDIKQFNAAMAQQKAE 428
>gi|423713066|ref|ZP_17687326.1| alanyl-tRNA synthetase [Bartonella vinsonii subsp. arupensis
OK-94-513]
gi|395424692|gb|EJF90872.1| alanyl-tRNA synthetase [Bartonella vinsonii subsp. arupensis
OK-94-513]
Length = 887
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 27/137 (19%)
Query: 325 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYAL 384
VD +SSG +A ++++++ FY E GGQI D G + G N
Sbjct: 478 IVDHISSGQKAVLVVNQTPFYGESGGQIGDSGIISGEN---------------------- 515
Query: 385 PIFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F + + +KK V + S + D ++L +D+ RR+ I +NH+ATH+L+
Sbjct: 516 ---FVFEVHDTQKKADGVFVHIGEVKSGQAKTSDCVELIVDSVRRKKIRANHSATHLLHE 572
Query: 443 ALRFVLGPEADQKGSLV 459
ALR VLGP QKGS V
Sbjct: 573 ALRQVLGPHVTQKGSFV 589
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 38/55 (69%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
L E G++A++LYDTYGFP+DLTQ + +G+SVD++ ++ A ++ + E +
Sbjct: 377 LKEGDYFSGEIAFKLYDTYGFPLDLTQDALRCRGISVDVDAFDKAMERQKEEARA 431
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFV 326
EG + L Y+ VD +SSG +A ++++++ FY E GGQI D G +S + FV
Sbjct: 466 EGILTALVYDGYIVDHISSGQKAVLVVNQTPFYGESGGQIGDSGIISGENFV 517
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 232 YNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
Y+ VD +SSG +A ++++++ FY E GGQI D G + G N
Sbjct: 474 YDGYIVDHISSGQKAVLVVNQTPFYGESGGQIGDSGIISGEN 515
>gi|387886633|ref|YP_006316932.1| alanyl-tRNA synthetase [Francisella noatunensis subsp. orientalis
str. Toba 04]
gi|386871449|gb|AFJ43456.1| alanyl-tRNA synthetase [Francisella noatunensis subsp. orientalis
str. Toba 04]
Length = 864
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 73/137 (53%), Gaps = 26/137 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q+VD + + + A I+LDK+ FYAE GGQ+ D G + G+
Sbjct: 468 QYVDVIKADSLAVIVLDKTPFYAESGGQVGDRGVLEGIG--------------------- 506
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
++F + +++K + + + LS L D++ ++ +RR +NH+ATH+L+
Sbjct: 507 ----IEFIVEDVQKSGEAILHIGRLSKGILHTNDEITARVNDSRRLATTANHSATHLLHK 562
Query: 443 ALRFVLGPEADQKGSLV 459
AL+ VLG A+QKGSLV
Sbjct: 563 ALKIVLGNHAEQKGSLV 579
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 37/52 (71%), Gaps = 1/52 (1%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+ G++A+RLYDTYGFP+DLT M EKGL +D E +++ + + Q + +AG
Sbjct: 380 ISGEIAFRLYDTYGFPLDLTVDMAREKGLKIDEEAFKE-QMQQQKQRSKEAG 430
Score = 41.6 bits (96), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
K L + Q+VD + + + A I+LDK+ FYAE GGQ+ D G + G+
Sbjct: 459 KVLEIFQDGQYVDVIKADSLAVIVLDKTPFYAESGGQVGDRGVLEGI 505
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 31/47 (65%)
Query: 274 DEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
++ V+ + + Q+VD + + + A I+LDK+ FYAE GGQ+ D G +
Sbjct: 456 EDAKVLEIFQDGQYVDVIKADSLAVIVLDKTPFYAESGGQVGDRGVL 502
>gi|302923886|ref|XP_003053770.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256734711|gb|EEU48057.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 956
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 76/150 (50%), Gaps = 33/150 (22%)
Query: 314 IYDEGFMSNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELW 370
IYD K F+ S + T G+LLD +NFYAE GGQ+ D G ++ ++D ++ +
Sbjct: 506 IYD-----GKTFLKSTKDIPEKTALGLLLDNTNFYAESGGQVADTGRIV-IDDVAEFNVL 559
Query: 371 FSSLVNLEGSKYALPI-FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRP 429
+ N G Y L ++++ L GD++ D RR P
Sbjct: 560 --DVQNFGG--YILHSGYIEYG-------------------ALNSGDEVICEYDELRRSP 596
Query: 430 IMSNHTATHILNHALRFVLGPEADQKGSLV 459
I +NHT THILNH+LR VLG E QKGSLV
Sbjct: 597 IRNNHTGTHILNHSLREVLGDEIHQKGSLV 626
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 3/61 (4%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSV 70
SK L GDV WRLYDT+GFPVDLT+LM EE+ L +D E A+ KA+ E+ ++ SV
Sbjct: 409 SKKLEGDVVWRLYDTFGFPVDLTRLMAEERSLEIDDAEVEAARIKAR---EASKAVKESV 465
Query: 71 E 71
+
Sbjct: 466 Q 466
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCG 106
++P++ + SVEFCGGTH+ + D + E IAKG I++Y G
Sbjct: 705 ADPKNVEWRQYSVEFCGGTHVEQTGLIKDLILIEESGIAKGIRRIIAYTG 754
>gi|255948530|ref|XP_002565032.1| Pc22g10240 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592049|emb|CAP98312.1| Pc22g10240 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 958
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 68/135 (50%), Gaps = 25/135 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
D V G + GI+LD +NFYAEQGGQ D G +I + Q EL + + G Y L
Sbjct: 516 TDDVPEGAQLGIILDCTNFYAEQGGQENDTGKIII---DGQAELEVGDVQSYAG--YVLH 570
Query: 386 I-FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F+++ + VG+ + D RR PI +NHT THILN AL
Sbjct: 571 TGFMKYG-------------------SFTVGNSVICEYDELRRWPIRNNHTGTHILNFAL 611
Query: 445 RFVLGPEADQKGSLV 459
+ VLG +QKGSLV
Sbjct: 612 KEVLGDGVEQKGSLV 626
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 45/66 (68%), Gaps = 3/66 (4%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
AK+ + +L G WRLYDT+GFPVDLT++M EE+GL +D +E+A+ KA+ E+ G
Sbjct: 404 AKVKGTDMLHGADVWRLYDTFGFPVDLTRIMAEERGLRIDDVEFEEARLKAK---EASKG 460
Query: 66 METSVE 71
+ + E
Sbjct: 461 QKKAAE 466
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
D V G + GI+LD +NFYAEQGGQ D G +I
Sbjct: 516 TDDVPEGAQLGIILDCTNFYAEQGGQENDTGKII 549
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 288 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
D V G + GI+LD +NFYAEQGGQ D G
Sbjct: 516 TDDVPEGAQLGIILDCTNFYAEQGGQENDTG 546
Score = 38.5 bits (88), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + VE + E+ ++ K +P Q E S+EFCGGTH+
Sbjct: 685 ETYPDPVRVVSVGVELE------EILKNVK-----DPRWQ---EVSIEFCGGTHVQKTGD 730
Query: 84 VGDFCISSEEAIAKG-SNIVSYCG 106
+ D I E IAKG I++ G
Sbjct: 731 IKDLIILEESGIAKGVRRIIAVTG 754
>gi|357384880|ref|YP_004899604.1| alanyl-tRNA synthetase [Pelagibacterium halotolerans B2]
gi|351593517|gb|AEQ51854.1| alanyl-tRNA synthetase [Pelagibacterium halotolerans B2]
Length = 886
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 74/140 (52%), Gaps = 22/140 (15%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G E I+L+++ FY E GGQ+ D G M D ++I + L+ +K A
Sbjct: 479 VDALNAGDEGFIVLNQTPFYGESGGQVGDTGIMQS-EDGARITV-------LDTTKQAGG 530
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
+F + + T+R+ + L L +D +RR I +NH+ATH+L+ ALR
Sbjct: 531 VFAH--------------RVRVEAGTVRIDEALTLRVDHSRRTAIRANHSATHLLHEALR 576
Query: 446 FVLGPEADQKGSLVYRYHLH 465
VLG QKGSLV L
Sbjct: 577 EVLGSHVAQKGSLVSPERLR 596
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
A LG+ L G+ A++LYDTYGFP+DLTQ + +G+SVD ++ A + ++E
Sbjct: 375 AGLGQGDTLAGETAFKLYDTYGFPLDLTQDALRLRGVSVDQTGFDAAMARQKAE 428
>gi|253689580|ref|YP_003018770.1| alanyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|251756158|gb|ACT14234.1| alanyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 875
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 31/158 (19%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N VD +++G EA ++L+++ FY E GGQ+ D+G +
Sbjct: 476 NGNAVDQIAAGDEAVVILNETPFYGESGGQVGDQGELKNAG------------------- 516
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
+ F++ + +K + + + L+ TLRV D + ++D+ RR I NH+ATH+L
Sbjct: 517 ------VSFAVQDTQKYGQAIGHVGKLTQGTLRVNDSVDANVDSQRRDRIRLNHSATHLL 570
Query: 441 NHALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
+ ALR VLG QKGSLV +L H M+ E+
Sbjct: 571 HAALRQVLGDHVAQKGSLVNDSYLRFDFSHTEAMKPEQ 608
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+GL VD E +E A + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERGLKVDEEGFEAAMTAQRQRAREASGFGVDYNS 448
Query: 66 ---METSVEFCG 74
++ + FCG
Sbjct: 449 LIRVDENTPFCG 460
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 9/57 (15%)
Query: 220 KHTPF---------VKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 267
++TPF K + +N VD +++G EA ++L+++ FY E GGQ+ D+G
Sbjct: 454 ENTPFCGYEKTQQQAKVIALYHNGNAVDQIAAGDEAVVILNETPFYGESGGQVGDQG 510
>gi|113461263|ref|YP_719332.1| alanyl-tRNA synthetase [Haemophilus somnus 129PT]
gi|123132149|sp|Q0I426.1|SYA_HAES1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|112823306|gb|ABI25395.1| alanyl-tRNA synthetase [Haemophilus somnus 129PT]
Length = 874
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+S+S+G A ++LD + FYAE GGQI D G +I N
Sbjct: 479 VESISAGQSAVVILDDTPFYAESGGQIGDRGCLIATN----------------------- 515
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
++F + + +K ++ + TL TL VG + +DT R NH+ATH+L+ AL
Sbjct: 516 --MRFDVKDTQKYGQVFGHIGTLIQGTLNVGQTINAVVDTEHRTKTSLNHSATHLLHAAL 573
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 574 RQVLGTHVAQKGSLV 588
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
VL G+VA++LYDTYGFP+DLT + E+ + +D E +E
Sbjct: 388 VLSGEVAFKLYDTYGFPLDLTADVCRERNIRIDEEGFE 425
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 232 YNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
Y + V+S+S+G A ++LD + FYAE GGQI D G +I N
Sbjct: 474 YEGKSVESISAGQSAVVILDDTPFYAESGGQIGDRGCLIATN 515
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM--SNKQF 325
+ V L Y + V+S+S+G A ++LD + FYAE GGQI D G + +N +F
Sbjct: 466 QAKVTALFYEGKSVESISAGQSAVVILDDTPFYAESGGQIGDRGCLIATNMRF 518
>gi|337755466|ref|YP_004647977.1| alanyl-tRNA synthetase [Francisella sp. TX077308]
gi|336447071|gb|AEI36377.1| Alanyl-tRNA synthetase [Francisella sp. TX077308]
Length = 865
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 26/137 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q V+++S+G+ A I+LDK+ FYAE GGQ+ D+G + GV
Sbjct: 468 QQVNTISNGSSAVIVLDKTPFYAEAGGQVGDKGILEGVG--------------------- 506
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
++F + +++K + V + L+ L D++ ++ +R +NH+ATH+L+
Sbjct: 507 ----VEFIVDDVQKSGEAVLHIGKLAKGVLNTSDEVSARVNDLKRLATAANHSATHLLHK 562
Query: 443 ALRFVLGPEADQKGSLV 459
AL+ VLG A+QKGSLV
Sbjct: 563 ALKVVLGDHAEQKGSLV 579
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY 49
++ G++A++LYDTYGFP DLT M EKGL VD + +
Sbjct: 379 IISGEIAFKLYDTYGFPFDLTADMAREKGLKVDEQAF 415
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 33/47 (70%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
K L + Q V+++S+G+ A I+LDK+ FYAE GGQ+ D+G + GV
Sbjct: 459 KVLEIFQDGQQVNTISNGSSAVIVLDKTPFYAEAGGQVGDKGILEGV 505
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 274 DEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN---KQFVDSVS 330
++ V+ + + Q V+++S+G+ A I+LDK+ FYAE GGQ+ D+G + + VD V
Sbjct: 456 EDAKVLEIFQDGQQVNTISNGSSAVIVLDKTPFYAEAGGQVGDKGILEGVGVEFIVDDVQ 515
Query: 331 SGTEA 335
EA
Sbjct: 516 KSGEA 520
>gi|170701933|ref|ZP_02892858.1| alanyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
gi|170133166|gb|EDT01569.1| alanyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
Length = 874
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 70/135 (51%), Gaps = 25/135 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ V +G +A ++LD + FYAE GGQ+ D+G + + +++A+
Sbjct: 479 VNEVKAGQDAVVVLDHTPFYAESGGQVGDQGLLANAS-----------------TRFAVA 521
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
LK + +V TL TL++GD ++ ID RR NH+ATH+++ AL
Sbjct: 522 -------DTLKVQADVVGHHGTLEQGTLKIGDVMRAEIDAHRRARTQRNHSATHLMHKAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 REVLGAHVQQKGSLV 589
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGMETS 69
KVL G++A++L+DTYGFP+DLT + E+G++VD ++D A+++ Q+ +
Sbjct: 387 KVLDGELAFKLHDTYGFPLDLTADVCRERGMTVDEPAFDDAMARQREQARAAGKFKATQG 446
Query: 70 VEFCG 74
+E+ G
Sbjct: 447 LEYTG 451
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 274 DEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
D+ VV L + V+ V +G +A ++LD + FYAE GGQ+ D+G ++N
Sbjct: 465 DDAKVVALYVDGSAVNEVKAGQDAVVVLDHTPFYAESGGQVGDQGLLAN 513
>gi|337279139|ref|YP_004618611.1| alanyl-tRNA synthetase [Ramlibacter tataouinensis TTB310]
gi|334730216|gb|AEG92592.1| candidate alanyl-tRNA synthetase (Alanine--tRNA ligase)
[Ramlibacter tataouinensis TTB310]
Length = 876
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 68/136 (50%), Gaps = 27/136 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V ++ G ++LD + FYAE GGQ+ D G + EG
Sbjct: 479 VQALREGEPGVVVLDTTPFYAESGGQVGDCG-----------------QITAEG------ 515
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH--TLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+QF + + +K K V H + TL+VGD + +D ARR+ M NH+ TH+++ A
Sbjct: 516 --VQFGVEDTQKIKADVYGHHGMQTQGTLQVGDAVMAKVDVARRQATMRNHSVTHLMHKA 573
Query: 444 LRFVLGPEADQKGSLV 459
LR VLGP QKGSLV
Sbjct: 574 LREVLGPHVQQKGSLV 589
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA--KKKAQSEPESQAGMETS 69
KVLPG+VA++L+DTYGFP+DLTQ + E+G++V + A ++KA + M+ +
Sbjct: 388 KVLPGEVAFKLHDTYGFPLDLTQDVCRERGVTVHEPGFNAAMDRQKAAGRAAGKFRMDRA 447
Query: 70 VEFCGGTH 77
+E+ G H
Sbjct: 448 LEYSGAGH 455
>gi|294932634|ref|XP_002780365.1| cytosolic tRNA-Ala synthetase, putative [Perkinsus marinus ATCC
50983]
gi|239890298|gb|EER12160.1| cytosolic tRNA-Ala synthetase, putative [Perkinsus marinus ATCC
50983]
Length = 982
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 72/142 (50%), Gaps = 35/142 (24%)
Query: 336 GILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNL 395
G++L + FYAEQGGQI+D G ++ L G++ F + N
Sbjct: 547 GLVLSVTPFYAEQGGQIFDVGTIVD---------------PLTGAR--------FDVKNT 583
Query: 396 KKKKKLVKLLH------TLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLG 449
+K + V LH + L+VG +++ +D RR I NHTATHILN ALR VLG
Sbjct: 584 QKFGQYV--LHIGSMDSAVDAALKVGSEVRASVDYQRRALIAKNHTATHILNFALRQVLG 641
Query: 450 PEADQKGSLV----YRYHLHEN 467
+ DQ+GSLV R+ +N
Sbjct: 642 DKCDQRGSLVDPSRLRFDFAQN 663
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 33/42 (78%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED 51
E KVL G A+ L+ T+GFP DLTQ+M +E+G++VD++ +E+
Sbjct: 419 EGKVLSGRDAFELFTTFGFPCDLTQVMAQERGMTVDVQSFEE 460
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQS 113
E E G E S+EFCGGTH+ + + F I++EE IAKG IV+ G + ++
Sbjct: 731 ETEVDFGHEFSIEFCGGTHVGNSQEIFKFVITAEEGIAKGIRRIVAATGPQAAVEA 786
>gi|332686450|ref|YP_004456224.1| alanyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
gi|332370459|dbj|BAK21415.1| alanyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
Length = 881
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 96/206 (46%), Gaps = 38/206 (18%)
Query: 270 IGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLD---KSNFYAEQGGQIYDEG-----FMS 321
+G +E V R K + S ++ +L D KS F G ++ D +
Sbjct: 422 MGFEEEMKVQRERARKARNNETSMNVQSAVLTDIKVKSTFV---GYEVLDNASELLVLLQ 478
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
NK+ VD+V G A ++ ++ FYAE GGQ+ D G + + EG++
Sbjct: 479 NKKMVDTVEKGM-AELIFAETPFYAEMGGQVADHGI----------------IEDGEGNQ 521
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRV--GDKLKLHIDTARRRPIMSNHTATHI 439
A I +Q + + + LH + T + G+ +LH+D R IM NHTATH+
Sbjct: 522 VAYVIDVQKAPNG--------QTLHKVEVTQPMIEGNIYQLHVDKQMRTYIMKNHTATHL 573
Query: 440 LNHALRFVLGPEADQKGSLVYRYHLH 465
L+ AL+ VLG A Q GSLV HL
Sbjct: 574 LHRALKDVLGEHATQAGSLVDADHLR 599
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGM 66
KL +S L G ++LYDTYGFPV+LT+ + + GL+VD +E+ K +
Sbjct: 382 KLTKSNTLDGKSIFKLYDTYGFPVELTEEIATDAGLTVDHMGFEEEMKVQRERARKARNN 441
Query: 67 ETSV 70
ETS+
Sbjct: 442 ETSM 445
>gi|390575999|ref|ZP_10256079.1| alanyl-tRNA ligase [Burkholderia terrae BS001]
gi|420253991|ref|ZP_14757017.1| alanine--tRNA ligase [Burkholderia sp. BT03]
gi|389932140|gb|EIM94188.1| alanyl-tRNA ligase [Burkholderia terrae BS001]
gi|398050334|gb|EJL42706.1| alanine--tRNA ligase [Burkholderia sp. BT03]
Length = 874
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 71/136 (52%), Gaps = 27/136 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V V+ G +A ++LD + FYAE GGQ+ D+G + +
Sbjct: 479 VKEVTKGQQAVVVLDHTPFYAESGGQVGDQGVLANAS----------------------- 515
Query: 386 IFLQFSLSN-LKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
++F++++ LK + +V TL TL+VGD +K ID RR NH+ATH+++ A
Sbjct: 516 --VRFAVADTLKVQADVVGHHGTLEQGTLKVGDVVKAEIDAIRRARTARNHSATHLMHKA 573
Query: 444 LRFVLGPEADQKGSLV 459
LR VLG QKGSLV
Sbjct: 574 LREVLGGHVQQKGSLV 589
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGMETS 69
K L G+VA++L+DTYGFP+DLT + E+ ++VD +++ A+++ Q+ + M
Sbjct: 387 KTLDGEVAFKLHDTYGFPLDLTADVCREREVTVDEPAFDEAMARQREQARAAGKFKMAQG 446
Query: 70 VEFCG 74
+E+ G
Sbjct: 447 LEYSG 451
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
V D+ + L + V V+ G +A ++LD + FYAE GGQ+ D+G ++N
Sbjct: 463 VFDDAKITALYVDGASVKEVTKGQQAVVVLDHTPFYAESGGQVGDQGVLAN 513
>gi|254931439|ref|ZP_05264798.1| alanyl-tRNA synthetase [Listeria monocytogenes HPB2262]
gi|405749848|ref|YP_006673314.1| alanyl-tRNA synthetase [Listeria monocytogenes ATCC 19117]
gi|424823266|ref|ZP_18248279.1| Alanyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
gi|293582990|gb|EFF95022.1| alanyl-tRNA synthetase [Listeria monocytogenes HPB2262]
gi|332311946|gb|EGJ25041.1| Alanyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
gi|404219048|emb|CBY70412.1| alanyl-tRNA synthetase [Listeria monocytogenes ATCC 19117]
Length = 879
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + V+ V++G+EA ++ ++ FYAE GGQ+ D+G + ES+ L + V
Sbjct: 474 LIQDDTLVEEVAAGSEAQVIFKETPFYAESGGQVADKGTI-----ESETGLAYVEDVQKA 528
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+K NL + + L+ GD +KL +D +RR + NHTATH
Sbjct: 529 PNK-----------QNLHR-------ISVKEGVLKTGDTVKLAVDKVKRRETIKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 571 LLHRALKDTLGEHVNQAGSLV 591
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+L+TI AK +++ G ++LYDT+GFPV+LT+ E+ GL VD +E K+ +
Sbjct: 371 ILETILKTAKETNEQIIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKEQR 430
Query: 58 SEPESQAGMETSVEFCG 74
S S++ G
Sbjct: 431 DRARSARADVKSMQVQG 447
>gi|49119610|gb|AAH73734.1| LOC443692 protein, partial [Xenopus laevis]
Length = 1005
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 65/133 (48%), Gaps = 26/133 (19%)
Query: 329 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFL 388
+ G G++LD++ FYAEQGGQ D+G+ V + Q L+ V + G
Sbjct: 569 IDKGQRCGVILDQTCFYAEQGGQSCDQGYF--VRKDQQEALFPVESVQVAGGY------- 619
Query: 389 QFSLSNLKKKKKLVKLLH--TLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRF 446
+LH T LRVGD+L L++D A R M HTATH+LN+ L
Sbjct: 620 ---------------MLHEVTTPEVLRVGDQLVLYLDEAHRLACMQKHTATHLLNYTLHQ 664
Query: 447 VLGPEADQKGSLV 459
VLG Q+GS V
Sbjct: 665 VLGENTVQRGSHV 677
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY-----EDAKKKA- 56
+T+ + E + P VAW L+ GFP+DL LM+EE+G+S+D E+A++K
Sbjct: 443 RTLQQQEEPQTFPVGVAWSLHRNLGFPLDLIGLMLEERGISLDKAAMDHLTVEEAERKMR 502
Query: 57 -QSEPESQAGMETSV 70
Q E+Q G+E V
Sbjct: 503 NQQADEAQTGLELDV 517
Score = 45.4 bits (106), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 9/80 (11%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG- 116
+P SQA ++TSVE C GTHL + D I SE +AKG + +++ G + +G
Sbjct: 755 KPGSQAALQTSVELCCGTHLLTTGAIQDVVIVSERPLAKGITRLIAITGEEAKQARETGH 814
Query: 117 -------SINDEMVNKYPSL 129
SI + M K SL
Sbjct: 815 ELVRAVESITERMKTKPLSL 834
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
TV+ L + + G G++LD++ FYAEQGGQ D+G+ K
Sbjct: 553 RATVLMLYKDHSLHSEIDKGQRCGVILDQTCFYAEQGGQSCDQGYFVRK 601
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 240 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ G G++LD++ FYAEQGGQ D+G+ +
Sbjct: 569 IDKGQRCGVILDQTCFYAEQGGQSCDQGYFV 599
>gi|332284668|ref|YP_004416579.1| alanyl-tRNA synthetase [Pusillimonas sp. T7-7]
gi|330428621|gb|AEC19955.1| alanyl-tRNA synthetase [Pusillimonas sp. T7-7]
Length = 873
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 72/136 (52%), Gaps = 27/136 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+SVS+G +A ++LD + FYAE GGQ+ D G ++ G++
Sbjct: 476 VESVSAGQQAIVVLDATPFYAESGGQVGDAG-----------------ILQANGAR---- 514
Query: 386 IFLQFSLSNLKKKKKLVKLLH--TLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
F++++ +K + V H L L VGD + +D ARR + NH+ATH+++ A
Sbjct: 515 ----FAVADTQKIQNSVFGHHGEMLEGVLAVGDTVDAQVDKARRARTVRNHSATHLMHKA 570
Query: 444 LRFVLGPEADQKGSLV 459
LR VLG Q+GSLV
Sbjct: 571 LRQVLGSHVQQRGSLV 586
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQ 63
+A + E +L G + LYDTYGFPVDLT + E+ + VDM+ +E A Q E
Sbjct: 377 ALAAVPEKGMLDGQTLFTLYDTYGFPVDLTADICREREVQVDMDGFEVAMNH-QREQARA 435
Query: 64 AGMETSVE 71
AG + E
Sbjct: 436 AGKFKAAE 443
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
+GTV L + V+SVS+G +A ++LD + FYAE GGQ+ D G +
Sbjct: 463 QGTVTALYIDGTQVESVSAGQQAIVVLDATPFYAESGGQVGDAGIL 508
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 25/33 (75%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
V+SVS+G +A ++LD + FYAE GGQ+ D G +
Sbjct: 476 VESVSAGQQAIVVLDATPFYAESGGQVGDAGIL 508
>gi|47093426|ref|ZP_00231191.1| alanyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
gi|226224105|ref|YP_002758212.1| alanyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|254824437|ref|ZP_05229438.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
gi|254852128|ref|ZP_05241476.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
gi|300764830|ref|ZP_07074820.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
gi|386732243|ref|YP_006205739.1| alanyl-tRNA synthetase [Listeria monocytogenes 07PF0776]
gi|404281063|ref|YP_006681961.1| alanyl-tRNA synthetase [Listeria monocytogenes SLCC2755]
gi|404286926|ref|YP_006693512.1| alanyl-tRNA synthetase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|405752724|ref|YP_006676189.1| alanyl-tRNA synthetase [Listeria monocytogenes SLCC2378]
gi|406704277|ref|YP_006754631.1| alanyl-tRNA synthetase [Listeria monocytogenes L312]
gi|417316045|ref|ZP_12102703.1| alanyl-tRNA synthetase [Listeria monocytogenes J1816]
gi|424714379|ref|YP_007015094.1| Alanine--tRNA ligase [Listeria monocytogenes serotype 4b str.
LL195]
gi|47018205|gb|EAL08973.1| alanyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
gi|225876567|emb|CAS05276.1| alanyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258605431|gb|EEW18039.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
gi|293593673|gb|EFG01434.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
gi|300514506|gb|EFK41563.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
gi|328465542|gb|EGF36771.1| alanyl-tRNA synthetase [Listeria monocytogenes J1816]
gi|384391001|gb|AFH80071.1| alanyl-tRNA synthetase [Listeria monocytogenes 07PF0776]
gi|404221924|emb|CBY73287.1| alanyl-tRNA synthetase [Listeria monocytogenes SLCC2378]
gi|404227698|emb|CBY49103.1| alanyl-tRNA synthetase [Listeria monocytogenes SLCC2755]
gi|404245855|emb|CBY04080.1| alanyl-tRNA synthetase [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|406361307|emb|CBY67580.1| alanyl-tRNA synthetase [Listeria monocytogenes L312]
gi|424013563|emb|CCO64103.1| Alanine--tRNA ligase [Listeria monocytogenes serotype 4b str.
LL195]
Length = 879
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + V+ V++G+EA ++ ++ FYAE GGQ+ D+G + ES+ L + V
Sbjct: 474 LIQDDTLVEEVAAGSEAQVIFKETPFYAESGGQVADKGTI-----ESETGLAYVEDVQKA 528
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+K NL + + L+ GD +KL +D +RR + NHTATH
Sbjct: 529 PNK-----------QNLHR-------ISVKEGVLKTGDTVKLAVDKVKRRETIKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 571 LLHRALKDTLGEHVNQAGSLV 591
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 32/171 (18%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD-------MEVYE 50
+L+TI AK +++ G ++LYDT+GFPV+LT+ E+ GL VD M+
Sbjct: 371 ILETILKTAKETNEQIIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKEQR 430
Query: 51 DAKKKAQSEPESQ-------AGMETSVEFCG---GTHLA-MAHHVGDFCISSEEAIAKGS 99
D + A+++ +S A + F G H++ + + + D + E A +
Sbjct: 431 DRARSARADVKSMQVQGELLANLTEKSAFVGYNSTEHVSEILYLIQDDTLVEEVAAGSEA 490
Query: 100 NIV-----------SYCGSKGTFQSHSGSINDEMVNKYPSLYRLFRTVHKQ 139
++ KGT +S +G E V K P+ L R K+
Sbjct: 491 QVIFKETPFYAESGGQVADKGTIESETGLAYVEDVQKAPNKQNLHRISVKE 541
>gi|405755662|ref|YP_006679126.1| alanyl-tRNA synthetase [Listeria monocytogenes SLCC2540]
gi|404224862|emb|CBY76224.1| alanyl-tRNA synthetase [Listeria monocytogenes SLCC2540]
Length = 879
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + V+ V++G+EA ++ ++ FYAE GGQ+ D+G + ES+ L + V
Sbjct: 474 LIQDDTLVEEVAAGSEAQVIFKETPFYAESGGQVADKGTI-----ESETGLAYVEDVQKA 528
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+K NL + + L+ GD +KL +D +RR + NHTATH
Sbjct: 529 PNK-----------QNLHR-------ISVKEGVLKTGDTVKLAVDKVKRRETIKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 571 LLHRALKDTLGEHVNQAGSLV 591
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 32/171 (18%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD-------MEVYE 50
+L+TI AK +++ G ++LYDT+GFPV+LT+ E+ GL VD M+
Sbjct: 371 ILETILKTAKETNEQIIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKEQR 430
Query: 51 DAKKKAQSEPESQ-------AGMETSVEFCG---GTHLA-MAHHVGDFCISSEEAIAKGS 99
D + A+++ +S A + F G H++ + + + D + E A +
Sbjct: 431 DRARSARADVKSMQVQGELLANLTEKSAFVGYNSTEHVSEILYLIQDDTLVEEVAAGSEA 490
Query: 100 NIV-----------SYCGSKGTFQSHSGSINDEMVNKYPSLYRLFRTVHKQ 139
++ KGT +S +G E V K P+ L R K+
Sbjct: 491 QVIFKETPFYAESGGQVADKGTIESETGLAYVEDVQKAPNKQNLHRISVKE 541
>gi|399075997|ref|ZP_10751799.1| alanine--tRNA ligase [Caulobacter sp. AP07]
gi|398038047|gb|EJL31221.1| alanine--tRNA ligase [Caulobacter sp. AP07]
Length = 881
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 67/134 (50%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDS ++G A +LLD+++FYAE GGQ D G + ES++
Sbjct: 479 VDSAAAGASAEVLLDRTSFYAESGGQAGDTGVIEANGAESRV------------------ 520
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
L K+ +L L+ L+VGD++ +D A+R +NH+A H+++ AL
Sbjct: 521 ------LDTQKQAGELYVHRVELAGPLKVGDQVVASVDAAKRTTTRANHSAAHLVHAALH 574
Query: 446 FVLGPEADQKGSLV 459
VLGP QKG +V
Sbjct: 575 HVLGPHVAQKGQMV 588
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQS 58
A L VL G+ A++LYDTYGFP+DLTQ V +G++VD + ++ A + ++
Sbjct: 375 ANLSAGGVLDGETAFKLYDTYGFPLDLTQDAVRARGITVDTDGFDVAMDRQRT 427
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
VDS ++G A +LLD+++FYAE GGQ D G +
Sbjct: 479 VDSAAAGASAEVLLDRTSFYAESGGQAGDTGVI 511
>gi|227114946|ref|ZP_03828602.1| alanyl-tRNA synthetase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 875
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 31/158 (19%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N VD +++G EA ++L+++ FY E GGQ+ D+G +
Sbjct: 476 NGTAVDQIAAGDEAVVILNETPFYGESGGQVGDQGELKNAG------------------- 516
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
+ F++ + +K + + + L+ TLRV D + ++D+ RR I NH+ATH+L
Sbjct: 517 ------VSFAVQDTQKYGQAIGHVGKLTQGTLRVNDSVDANVDSQRRDRIRLNHSATHLL 570
Query: 441 NHALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
+ ALR VLG QKGSLV +L H M+ E+
Sbjct: 571 HAALRQVLGDHVAQKGSLVNDSYLRFDFSHTEAMKPEQ 608
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+GL VD E +E A + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERGLKVDEEGFEAAMTAQRQRAREASGFGVDYNS 448
Query: 66 ---METSVEFCG 74
++ + FCG
Sbjct: 449 LIRVDENTPFCG 460
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 9/57 (15%)
Query: 220 KHTPF---------VKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 267
++TPF K + +N VD +++G EA ++L+++ FY E GGQ+ D+G
Sbjct: 454 ENTPFCGYEKTQQQAKVIAIYHNGTAVDQIAAGDEAVVILNETPFYGESGGQVGDQG 510
>gi|270264045|ref|ZP_06192313.1| alanyl-tRNA synthetase [Serratia odorifera 4Rx13]
gi|270042238|gb|EFA15334.1| alanyl-tRNA synthetase [Serratia odorifera 4Rx13]
Length = 839
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 70/143 (48%), Gaps = 26/143 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q VD + G EA ++LD++ FY E GGQ+ D+G + +
Sbjct: 442 QPVDEIHVGEEAVVVLDETPFYGESGGQVGDKGVLKTAGAD------------------- 482
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +S+ +K + + LSH L+V D++ ID ARR I NH+ATH+L+
Sbjct: 483 ------FVVSDTQKYGQAIGHQGKLSHGVLKVKDRVDAQIDIARRNRIRLNHSATHLLHA 536
Query: 443 ALRFVLGPEADQKGSLVYRYHLH 465
ALR LG QKGSLV +L
Sbjct: 537 ALRQTLGEHVAQKGSLVNDKYLR 559
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+ L G+ A+RLYDTYGFPVDLT + E+GL VD +E A + + +G
Sbjct: 350 QGDTLDGEAAFRLYDTYGFPVDLTADVCRERGLKVDEAGFEQAMEAQRRRARESSG 405
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
+ TV L + Q VD + G EA ++LD++ FY E GGQ+ D+G +
Sbjct: 431 QATVTALFRDGQPVDEIHVGEEAVVVLDETPFYGESGGQVGDKGVL 476
>gi|325179830|emb|CCA14233.1| unnamed protein product [Albugo laibachii Nc14]
Length = 1022
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 75/142 (52%), Gaps = 25/142 (17%)
Query: 321 SNKQFVDSVSSGT--EAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
S+ +FV +V++ GI+LD+++FYA+ GGQ+YD G +LE
Sbjct: 574 SSCEFVSAVTAQKHDRIGIVLDRTSFYAQAGGQVYDTG-------------------SLE 614
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
+ P +F++ ++ V TL S +L+VGD + +D RR I NHT T
Sbjct: 615 KDQ---PAGTRFNIDAVESYAGYVLHAGTLESGSLQVGDDISCQVDYDRRSKIAPNHTMT 671
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H+LN ALR VL DQ+GSLV
Sbjct: 672 HVLNFALRKVLVKNVDQRGSLV 693
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%), Gaps = 4/61 (6%)
Query: 6 AKLGESKVLP---GDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
A+ GE + P G A+ LYD+ GFP+DLTQ+M EE+G++VD+E Y + + K QSE
Sbjct: 459 ARDGEKQQAPAISGKDAFFLYDSMGFPLDLTQVMAEEEGMTVDVEGYGE-QMKLQSERSK 517
Query: 63 Q 63
Q
Sbjct: 518 Q 518
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 59 EPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKG 109
+PE+ SVEFCGGTHL F + E AIA+G I +Y G +
Sbjct: 773 DPENSTWSNFSVEFCGGTHLENTKQARKFVLYEEGAIARGIRRISAYTGQEA 824
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%), Gaps = 9/61 (14%)
Query: 235 QFVDSVSSGT--EAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVS 292
+FV +V++ GI+LD+++FYA+ GGQ+YD G + ++ G R+N +D+V
Sbjct: 577 EFVSAVTAQKHDRIGIVLDRTSFYAQAGGQVYDTGSL----EKDQPAGTRFN---IDAVE 629
Query: 293 S 293
S
Sbjct: 630 S 630
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 286 QFVDSVSSGT--EAGILLDKSNFYAEQGGQIYDEGFMSNKQ 324
+FV +V++ GI+LD+++FYA+ GGQ+YD G + Q
Sbjct: 577 EFVSAVTAQKHDRIGIVLDRTSFYAQAGGQVYDTGSLEKDQ 617
>gi|290893863|ref|ZP_06556841.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
gi|404407942|ref|YP_006690657.1| alanyl-tRNA synthetase [Listeria monocytogenes SLCC2376]
gi|290556580|gb|EFD90116.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
gi|404242091|emb|CBY63491.1| alanyl-tRNA synthetase [Listeria monocytogenes SLCC2376]
Length = 879
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + V+ V++G+EA ++ ++ FYAE GGQ+ D+G + ES+ L + V
Sbjct: 474 LIQDDTLVEEVAAGSEAQVIFKETPFYAESGGQVADKGTI-----ESETGLAYVEDVQKA 528
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+K NL + + L+ GD +KL +D +RR + NHTATH
Sbjct: 529 PNK-----------QNLHR-------ISVKEGVLKTGDTVKLAVDKVKRRETIKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 571 LLHRALKDTLGEHVNQAGSLV 591
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 32/171 (18%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD-------MEVYE 50
+L+TI AK +++ G ++LYDT+GFPV+LT+ E+ GL VD M+
Sbjct: 371 ILETILKTAKETNEQIIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKEQR 430
Query: 51 DAKKKAQSEPESQ-------AGMETSVEFCG---GTHLA-MAHHVGDFCISSEEAIAKGS 99
D + A+++ +S A + F G H++ + + + D + E A +
Sbjct: 431 DRARSARADVKSMQVQGELLANLTEKSAFVGYNSTEHVSEILYLIQDDTLVEEVAAGSEA 490
Query: 100 NIV-----------SYCGSKGTFQSHSGSINDEMVNKYPSLYRLFRTVHKQ 139
++ KGT +S +G E V K P+ L R K+
Sbjct: 491 QVIFKETPFYAESGGQVADKGTIESETGLAYVEDVQKAPNKQNLHRISVKE 541
>gi|46907732|ref|YP_014121.1| alanyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
F2365]
gi|59798548|sp|Q71ZG6.1|SYA_LISMF RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|46881001|gb|AAT04298.1| alanyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
F2365]
Length = 879
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + V+ V++G+EA ++ ++ FYAE GGQ+ D+G + ES+ L + V
Sbjct: 474 LIQDDTLVEEVAAGSEAQVIFKETPFYAESGGQVADKGTI-----ESETGLAYVEDVQKA 528
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+K NL + + L+ GD +KL +D +RR + NHTATH
Sbjct: 529 PNK-----------QNLHR-------ISVKEGVLKTGDTVKLAVDKVKRRETIKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 571 LLHRALKDTLGEHVNQAGSLV 591
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 32/171 (18%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD-------MEVYE 50
+L+TI AK +++ G ++LYDT+GFPV+LT+ E+ GL VD M+
Sbjct: 371 ILETILKTAKETNEQIIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKEQR 430
Query: 51 DAKKKAQSEPESQ-------AGMETSVEFCG---GTHLA-MAHHVGDFCISSEEAIAKGS 99
D + A+++ +S A + F G H++ + + + D + E A +
Sbjct: 431 DRARSARADVKSMQVQGELLANLTEKSAFVGYNSTEHVSEILYLIQDDTLVEEVAAGSEA 490
Query: 100 NIV-----------SYCGSKGTFQSHSGSINDEMVNKYPSLYRLFRTVHKQ 139
++ KGT +S +G E V K P+ L R K+
Sbjct: 491 QVIFKETPFYAESGGQVADKGTIESETGLAYVEDVQKAPNKQNLHRISVKE 541
>gi|205830263|sp|A7HWA5.2|SYA_PARL1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 892
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 29/162 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
+ + Q VD V +GT+A ++ +++ FYAE GGQ+ D G + FS+
Sbjct: 471 ALLVDGQPVDKVEAGTDAALITNQTPFYAESGGQVGDTGIV------------FSA---- 514
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+G+++ + + +KK L + L+ TL++GD +++ +D + R +NH+A
Sbjct: 515 DGAEFPV-------IDTMKKLGALHVHIGKLARGTLKLGDIVEMKVDKSLRDATRANHSA 567
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
TH+L+ ALR VLG QKGS+V L H M EE
Sbjct: 568 THLLHEALRRVLGDHVTQKGSMVGPERLRFDFSHPKPMTPEE 609
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
+ I LG VL G+VA++LYDTYGFP+DLTQ + +G+SVD +++A K + +
Sbjct: 372 EEIESLGGKGVLAGEVAFKLYDTYGFPLDLTQDALRSRGMSVDQTGFDEAMAKQRQD 428
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
EG VV L + Q VD V +GT+A ++ +++ FYAE GGQ+ D G +
Sbjct: 466 EGKVVALLVDGQPVDKVEAGTDAALITNQTPFYAESGGQVGDTGIV 511
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
Q VD V +GT+A ++ +++ FYAE GGQ+ D G + +
Sbjct: 477 QPVDKVEAGTDAALITNQTPFYAESGGQVGDTGIVFSAD 515
>gi|254993607|ref|ZP_05275797.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
Length = 826
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + V+ V++G+EA ++ ++ FYAE GGQ+ D+G + ES+ L + V
Sbjct: 474 LIQDDTLVEEVAAGSEAQVIFKETPFYAESGGQVADKGTI-----ESETGLAYVEDVQKA 528
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+K NL + + L+ GD +KL +D +RR + NHTATH
Sbjct: 529 PNK-----------QNLHR-------ISVKEGVLKTGDTVKLAVDKVKRRETIKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 571 LLHRALKDTLGEHVNQAGSLV 591
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+L+TI AK +++ G ++LYDT+GFPV+LT+ E+ GL VD +E K+ +
Sbjct: 371 ILETILKTAKETNEQIIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKEQR 430
Query: 58 SEPESQAGMETSVEFCG 74
S S++ G
Sbjct: 431 DRARSARADVKSMQVQG 447
>gi|163868621|ref|YP_001609830.1| alanyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
gi|205829989|sp|A9IVY8.1|SYA_BART1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|161018277|emb|CAK01835.1| Alanyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
Length = 888
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 74/144 (51%), Gaps = 27/144 (18%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
+ + + VD VSSG +A ++L+++ FY E GGQI D G + G +
Sbjct: 471 ALVCDGKIVDEVSSGQKAILVLNQTPFYGESGGQIGDSGIISGED--------------- 515
Query: 378 EGSKYALPIFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHT 435
F+ F + + +KK + L S ++ D ++L +D RR+ I +NH+
Sbjct: 516 ---------FI-FEVHDTQKKADGVFIHLGKVKSGHAKISDCVQLTVDVVRRKKIRANHS 565
Query: 436 ATHILNHALRFVLGPEADQKGSLV 459
ATH+L+ ALR VLG QKGSLV
Sbjct: 566 ATHLLHEALRQVLGSHVTQKGSLV 589
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 42/58 (72%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQ 63
AKL E L G+VA++LYDTYGFP+DLTQ ++ +G+SVD++ ++ A ++ + E +
Sbjct: 375 AKLKEGDHLNGEVAFKLYDTYGFPLDLTQDVLRRRGISVDVDAFDKAMERQKEEARAH 432
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFV 326
EG + L + + VD VSSG +A ++L+++ FY E GGQI D G +S + F+
Sbjct: 466 EGIITALVCDGKIVDEVSSGQKAILVLNQTPFYGESGGQIGDSGIISGEDFI 517
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
+ VD VSSG +A ++L+++ FY E GGQI D G + G
Sbjct: 477 KIVDEVSSGQKAILVLNQTPFYGESGGQIGDSGIISG 513
>gi|402851914|ref|ZP_10900037.1| Alanyl-tRNA synthetase [Rhodovulum sp. PH10]
gi|402497813|gb|EJW09602.1| Alanyl-tRNA synthetase [Rhodovulum sp. PH10]
Length = 891
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 70/153 (45%), Gaps = 28/153 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
DS++ G ++L+++ FY E GGQ+ D G M+G EG ++
Sbjct: 478 ADSLAKGEAGAVILNQTPFYGESGGQVGDTGVMVG-----------------EGVRF--- 517
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
+ + +N K V TL+ G L L +D RR I NH+ATH+L+ ALR
Sbjct: 518 ---RVTATNKKAGDVFVHSGTVEEGTLKPGQPLSLEVDHGRRSDIRRNHSATHLLHEALR 574
Query: 446 FVLGPEADQKGSLVYRYHL-----HENIMECEE 473
VLG QKGS+V L H M EE
Sbjct: 575 QVLGDHVAQKGSMVAPDRLRFDFSHPKKMSDEE 607
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
LG L G+ A+ LYDTYGFP+DLTQ ++ +G+ VD++ + A ++ + + +
Sbjct: 376 LGRGDSLSGETAFTLYDTYGFPLDLTQDALKARGVGVDLDAFNAAMERQREKARA 430
>gi|340517287|gb|EGR47532.1| predicted protein [Trichoderma reesei QM6a]
Length = 954
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 29/134 (21%)
Query: 329 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFL 388
+ + T G+LLD++NFYAE GGQ+ D G ++ ++D +
Sbjct: 516 IPANTAIGVLLDQTNFYAESGGQVADTGRIV-IDD-----------------------VV 551
Query: 389 QFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
+F + +++ + LH+ L GD++ D RR PI +NHT THILNH+LR
Sbjct: 552 EFKVIDVQDYGGYI--LHSGYIEYGELSSGDEVICEYDELRRSPIRNNHTGTHILNHSLR 609
Query: 446 FVLGPEADQKGSLV 459
VLG + QKGSLV
Sbjct: 610 EVLGDDVHQKGSLV 623
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVE 71
K L GDV WRLYDT+GFPVDLT+LM EE+GL +D A++KA+ E+ ++ SV+
Sbjct: 407 KKLDGDVVWRLYDTFGFPVDLTKLMAEERGLEIDEAEVAVAREKAR---EASKAVKDSVQ 463
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+TY PV + + G+ VD + ++P++ + SVEFCGGTH+
Sbjct: 682 ETYPNPVRVVSI-----GMDVDTLL---------ADPKNPDWRKYSVEFCGGTHVEQTGL 727
Query: 84 VGDFCISSEEAIAKG-SNIVSYCG 106
+ D I E IAKG I++Y G
Sbjct: 728 IKDLVIVEESGIAKGIRRIIAYTG 751
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 240 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ + T G+LLD++NFYAE GGQ+ D G ++
Sbjct: 516 IPANTAIGVLLDQTNFYAESGGQVADTGRIV 546
Score = 38.5 bits (88), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 291 VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+ + T G+LLD++NFYAE GGQ+ D G
Sbjct: 516 IPANTAIGVLLDQTNFYAESGGQVADTG 543
>gi|110799076|ref|YP_696466.1| alanyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
gi|168211405|ref|ZP_02637030.1| alanyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
gi|123148653|sp|Q0TPH4.1|SYA_CLOP1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|110673723|gb|ABG82710.1| alanyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
gi|170710656|gb|EDT22838.1| alanyl-tRNA synthetase [Clostridium perfringens B str. ATCC 3626]
Length = 879
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+N++F + G E +L DK+ FYAE GGQ+ D G + E+ + + N+ G
Sbjct: 476 NNEEFKSELKEGEEGFLLTDKTPFYAEMGGQVGDRG---NITSETGMAIVTDCKKNVGG- 531
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
K V + + +L+ G ++KL +D +RR I NHTATH+L
Sbjct: 532 -------------------KFVHYIKVIEGSLKEGQEVKLSVDASRRSNICKNHTATHML 572
Query: 441 NHALRFVLGPEADQKGSLVYRYHLH 465
+ AL+ VLG +Q GS V L
Sbjct: 573 HEALKEVLGDHVNQSGSYVDEERLR 597
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETS 69
KVL G A++LYDTYGFP++LTQ ++EEKGL +D+E + + + K Q E A E+S
Sbjct: 383 KVLSGAKAFKLYDTYGFPLELTQEILEEKGLELDIENF-NKEMKEQRERARNARGESS 439
>gi|420257372|ref|ZP_14760132.1| alanyl-tRNA ligase [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|404515162|gb|EKA28937.1| alanyl-tRNA ligase [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 875
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N + VD + G EA ++L+++ FY E GGQ+ D G L N
Sbjct: 472 ALFRNGEAVDEIHEGEEAVVVLNQTPFYGESGGQVGDTG----------------ELKNA 515
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+ F++++ +K + + L L+H TLRV + +D ARR I NH+A
Sbjct: 516 TAT---------FAVADTQKYGQAIGHLGQLTHGTLRVNHSIDAQVDVARRNRIRLNHSA 566
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR LG QKGSLV +L
Sbjct: 567 THLLHAALRKTLGDHVAQKGSLVNDKYLR 595
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
L G+ A+RLYDTYGFPVDLT + E+ L VD +E A + + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSG 441
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
V+ + TV L N + VD + G EA ++L+++ FY E GGQ+ D G + N
Sbjct: 464 VHQQATVTALFRNGEAVDEIHEGEEAVVVLNQTPFYGESGGQVGDTGELKN 514
>gi|429087898|ref|ZP_19150630.1| Alanyl-tRNA synthetase [Cronobacter universalis NCTC 9529]
gi|426507701|emb|CCK15742.1| Alanyl-tRNA synthetase [Cronobacter universalis NCTC 9529]
Length = 839
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ V++G +A ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 444 VEQVTAGQQAVVVLDETPFYAESGGQVGDKG-------------------ELKGNGFT-- 482
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++++ +K + + + L S L+VG+ +K +D ARR I NH+ATH+++ AL
Sbjct: 483 ----FTVNDTQKYGQAIGHIGELASGVLKVGEGVKAEVDHARRDRIRLNHSATHLMHAAL 538
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 539 RQVLGTHVAQKGSLV 553
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 344 EELAKL-TGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 402
Query: 63 QAG 65
+G
Sbjct: 403 SSG 405
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAG 336
V L + + V+ V++G +A ++LD++ FYAE GGQ+ D+G + F +V+ + G
Sbjct: 434 VTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFTVNDTQKYG 492
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 6/44 (13%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDE------GFMIGVND 274
V+ V++G +A ++LD++ FYAE GGQ+ D+ GF VND
Sbjct: 444 VEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFTVND 487
>gi|123441185|ref|YP_001005172.1| alanyl-tRNA synthetase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|205830291|sp|A1JK09.1|SYA_YERE8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|122088146|emb|CAL10934.1| alanyl-tRNA synthetase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 875
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N + VD + G EA ++L+++ FY E GGQ+ D G L N
Sbjct: 472 ALFRNGEAVDEIHEGEEAVVVLNQTPFYGESGGQVGDTG----------------ELKNA 515
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+ F++++ +K + + L L+H TLRV + +D ARR I NH+A
Sbjct: 516 TAT---------FAVADTQKYGQAIGHLGQLTHGTLRVNHSIDAQVDVARRNRIRLNHSA 566
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR LG QKGSLV +L
Sbjct: 567 THLLHAALRKTLGDHVAQKGSLVNDKYLR 595
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 10/76 (13%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ L VD +E A + + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSGFGADYNN 448
Query: 66 ---METSVEFCGGTHL 78
++++ +F G H+
Sbjct: 449 LIRVDSASQFSGYNHV 464
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
V+ + TV L N + VD + G EA ++L+++ FY E GGQ+ D G + N
Sbjct: 464 VHQQATVTALFRNGEAVDEIHEGEEAVVVLNQTPFYGESGGQVGDTGELKN 514
>gi|429143626|gb|AFZ77081.1| alanyl-tRNA synthetase [gamma proteobacterium PEB0191]
Length = 877
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 68/140 (48%), Gaps = 24/140 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ + G EA I+LDK+ FY E GGQ+ D+G + N ++ ++ KY
Sbjct: 479 VNRIDQGDEAVIILDKTPFYGESGGQVGDKGILTATNINFEV---------VDSQKYG-- 527
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
K + + H L L+VGDK+ I+ R I NH+ATH+L AL+
Sbjct: 528 -------------KNIGHIGHLLQGQLQVGDKIAAIINDELRARIRRNHSATHLLQAALQ 574
Query: 446 FVLGPEADQKGSLVYRYHLH 465
+LG QKGSLV +L
Sbjct: 575 RILGSHVQQKGSLVNDNYLR 594
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD 45
Q + K+ +S L G+VA++LYDTYGFP DLT + EK ++VD
Sbjct: 379 QELTKI-QSNQLSGEVAFKLYDTYGFPFDLTADVCREKDITVD 420
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 4/65 (6%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS----NKQFVDSVSS 331
TVV + + V+ + G EA I+LDK+ FY E GGQ+ D+G ++ N + VDS
Sbjct: 467 ATVVAIFQQGKSVNRIDQGDEAVIILDKTPFYGESGGQVGDKGILTATNINFEVVDSQKY 526
Query: 332 GTEAG 336
G G
Sbjct: 527 GKNIG 531
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 9/62 (14%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTE 296
V+ + G EA I+LDK+ FY E GGQ+ D+G + N N + VDS G
Sbjct: 479 VNRIDQGDEAVIILDKTPFYGESGGQVGDKGILTATN---------INFEVVDSQKYGKN 529
Query: 297 AG 298
G
Sbjct: 530 IG 531
>gi|319408736|emb|CBI82393.1| Alanyl-tRNA synthetase [Bartonella schoenbuchensis R1]
Length = 889
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 70/144 (48%), Gaps = 27/144 (18%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
+ + + VD VSSG +A ++++++ FY E GGQI D G + G N
Sbjct: 471 ALICDGEIVDKVSSGQKAMLVVNQTPFYGESGGQIGDSGIISGEN--------------- 515
Query: 378 EGSKYALPIFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHT 435
F + + +KK K V + S + D ++L +D RRR I +NH+
Sbjct: 516 ----------FIFEVHDTQKKAKGVFVHIGEVKSGQAKTHDCVELAVDCVRRRKIRANHS 565
Query: 436 ATHILNHALRFVLGPEADQKGSLV 459
ATHIL+ ALR LG QKGS V
Sbjct: 566 ATHILHKALRQTLGDHVVQKGSFV 589
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQ 63
L E G+VA++LYDTYGFP+DLTQ + +G+SVD+ + A + ++E +
Sbjct: 377 LKEGDCFNGEVAFKLYDTYGFPLDLTQDALRHRGISVDVNAFNKAMEHQKAEARAN 432
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFV 326
EG + L + + VD VSSG +A ++++++ FY E GGQI D G +S + F+
Sbjct: 466 EGVITALICDGEIVDKVSSGQKAMLVVNQTPFYGESGGQIGDSGIISGENFI 517
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
+ VD VSSG +A ++++++ FY E GGQI D G + G N
Sbjct: 477 EIVDKVSSGQKAMLVVNQTPFYGESGGQIGDSGIISGEN 515
>gi|154253021|ref|YP_001413845.1| alanyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
gi|154156971|gb|ABS64188.1| alanyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
Length = 913
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 29/162 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
+ + Q VD V +GT+A ++ +++ FYAE GGQ+ D G + FS+
Sbjct: 492 ALLVDGQPVDKVEAGTDAALITNQTPFYAESGGQVGDTGIV------------FSA---- 535
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+G+++ + + +KK L + L+ TL++GD +++ +D + R +NH+A
Sbjct: 536 DGAEFPV-------IDTMKKLGALHVHIGKLARGTLKLGDIVEMKVDKSLRDATRANHSA 588
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
TH+L+ ALR VLG QKGS+V L H M EE
Sbjct: 589 THLLHEALRRVLGDHVTQKGSMVGPERLRFDFSHPKPMTPEE 630
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
+ I LG VL G+VA++LYDTYGFP+DLTQ + +G+SVD +++A K + +
Sbjct: 393 EEIESLGGKGVLAGEVAFKLYDTYGFPLDLTQDALRSRGMSVDQTGFDEAMAKQRQD 449
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
EG VV L + Q VD V +GT+A ++ +++ FYAE GGQ+ D G +
Sbjct: 487 EGKVVALLVDGQPVDKVEAGTDAALITNQTPFYAESGGQVGDTGIV 532
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 26/39 (66%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
Q VD V +GT+A ++ +++ FYAE GGQ+ D G + +
Sbjct: 498 QPVDKVEAGTDAALITNQTPFYAESGGQVGDTGIVFSAD 536
>gi|255084804|ref|XP_002504833.1| alanyl-tRNA synthetase [Micromonas sp. RCC299]
gi|226520102|gb|ACO66091.1| alanyl-tRNA synthetase [Micromonas sp. RCC299]
Length = 945
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 62/124 (50%), Gaps = 24/124 (19%)
Query: 336 GILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNL 395
G++LDK++FYAE GGQ+ D G + S+ +E +K A L
Sbjct: 522 GLVLDKTSFYAESGGQVCDVGVIKS----------GSASATVEDTKVAAGFVLH------ 565
Query: 396 KKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQK 455
++ + VGD ++ +D RR IM NHT TH LN+ALR VLG DQK
Sbjct: 566 --------SCDSVDGAVAVGDAVRCLVDYDRRANIMPNHTMTHCLNYALRRVLGDSVDQK 617
Query: 456 GSLV 459
GSLV
Sbjct: 618 GSLV 621
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 32/44 (72%)
Query: 16 GDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
G A+ L++++GFPVDL ++M EE G+ VD +E+A K+AQ +
Sbjct: 411 GAEAFLLWESFGFPVDLVEIMCEENGMKVDNAGFEEAFKEAQEK 454
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 24/39 (61%)
Query: 60 PESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG 98
P S+ S+EFCGGTHLA DF + SEE IAKG
Sbjct: 702 PASEDWKGYSIEFCGGTHLANTSDAADFVLLSEEGIAKG 740
>gi|429111373|ref|ZP_19173143.1| Alanyl-tRNA synthetase [Cronobacter malonaticus 507]
gi|426312530|emb|CCJ99256.1| Alanyl-tRNA synthetase [Cronobacter malonaticus 507]
Length = 427
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ V++G +A ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 32 VEQVTAGQQAVVVLDETPFYAESGGQVGDKG-------------------ELKGNGFT-- 70
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++++ +K + + + L S L+VG+ +K +D ARR I NH+ATH+++ AL
Sbjct: 71 ----FTVNDTQKYGQAIGHIGELASGVLKVGEGVKAEVDHARRDRIRLNHSATHLMHAAL 126
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 127 RQVLGTHVAQKGSLV 141
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVS 330
V L + + V+ V++G +A ++LD++ FYAE GGQ+ D+G + F +V+
Sbjct: 22 VTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFTVN 74
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 6/44 (13%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDE------GFMIGVND 274
V+ V++G +A ++LD++ FYAE GGQ+ D+ GF VND
Sbjct: 32 VEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFTVND 75
>gi|377577347|ref|ZP_09806330.1| alanyl-tRNA synthetase [Escherichia hermannii NBRC 105704]
gi|377541875|dbj|GAB51495.1| alanyl-tRNA synthetase [Escherichia hermannii NBRC 105704]
Length = 876
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 73/135 (54%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD +S G +A ++L+++ FYAE GGQ+ D G L+G+ +A
Sbjct: 480 VDQISVGEQAVVILNETPFYAESGGQVGDRG-------------------ELQGNGFA-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + L+ L+VG+ + +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FTVEDTQKYGQAIGHIGKLTRGVLKVGEGVNAQVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-TGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G +E + EF G H+ + V + + + I+ G V
Sbjct: 439 SSGFGADYNAMIRVEGASEFKGYDHVELTGKVTALFVDGKAVDQISVGEQAVVILNETPF 498
Query: 111 FQSHSGSIND 120
+ G + D
Sbjct: 499 YAESGGQVGD 508
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEA 335
G V L + + VD +S G +A ++L+++ FYAE GGQ+ D G + F +V +
Sbjct: 468 GKVTALFVDGKAVDQISVGEQAVVILNETPFYAESGGQVGDRGELQGNGFAFTVEDTQKY 527
Query: 336 G 336
G
Sbjct: 528 G 528
>gi|385870606|gb|AFI89126.1| Alanyl-tRNA synthetase [Pectobacterium sp. SCC3193]
Length = 875
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 31/158 (19%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N VD +++G EA ++L+++ FY E GGQ+ D+G + +
Sbjct: 476 NGNAVDQIAAGDEAVVILNETPFYGESGGQVGDQGELKNAD------------------- 516
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
+ F + + +K + + + L+ TLRV D + ++D+ RR I NH+ATH+L
Sbjct: 517 ------VSFVVQDTQKYGQAIGHVGKLTQGTLRVNDSVDANVDSQRRDRIRLNHSATHLL 570
Query: 441 NHALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
+ ALR VLG QKGSLV +L H M+ E+
Sbjct: 571 HAALRQVLGDHVAQKGSLVNDSYLRFDFSHTEAMKPEQ 608
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ +RLYDTYGFPVDLT + E+GL VD E +E A + +G
Sbjct: 389 TLDGETVFRLYDTYGFPVDLTADVCRERGLKVDEEGFESAMTAQRQRAREASGFGVDYNS 448
Query: 66 ---METSVEFCG 74
++ + FCG
Sbjct: 449 LIRVDENTPFCG 460
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 32/48 (66%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
+ V+ L +N VD +++G EA ++L+++ FY E GGQ+ D+G + N
Sbjct: 467 QAKVIALYHNGNAVDQIAAGDEAVVILNETPFYGESGGQVGDQGELKN 514
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 9/57 (15%)
Query: 220 KHTPF---------VKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 267
++TPF K + +N VD +++G EA ++L+++ FY E GGQ+ D+G
Sbjct: 454 ENTPFCGYEKTQQQAKVIALYHNGNAVDQIAAGDEAVVILNETPFYGESGGQVGDQG 510
>gi|295677107|ref|YP_003605631.1| alanyl-tRNA synthetase [Burkholderia sp. CCGE1002]
gi|295436950|gb|ADG16120.1| alanyl-tRNA synthetase [Burkholderia sp. CCGE1002]
Length = 874
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 25/135 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V V +G A ++LD + FYAE GGQ+ D+G + + +++A+
Sbjct: 479 VQQVQAGQPAVVVLDHTPFYAESGGQVGDQGVLANAS-----------------TRFAVA 521
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
LK + +V TL TL+VGD +K ID RR NH+ATH+++ AL
Sbjct: 522 -------DTLKVQADVVGHHGTLEQGTLKVGDVVKAEIDAVRRARTARNHSATHLMHKAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 REVLGSHVQQKGSLV 589
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGMETS 69
K L G++A++L+DTYGFP+DLT + E+ ++VD ++D A+++ Q+ + M
Sbjct: 387 KTLDGELAFKLHDTYGFPLDLTADVCREREVTVDEPAFDDAMARQREQARAAGKFKMAQG 446
Query: 70 VEFCG 74
+E+ G
Sbjct: 447 LEYSG 451
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
V D+ VV L + V V +G A ++LD + FYAE GGQ+ D+G ++N
Sbjct: 463 VFDDAKVVALYVDGASVQQVQAGQPAVVVLDHTPFYAESGGQVGDQGVLAN 513
>gi|170717275|ref|YP_001784390.1| alanyl-tRNA synthetase [Haemophilus somnus 2336]
gi|205830062|sp|B0UTE1.1|SYA_HAES2 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|168825404|gb|ACA30775.1| alanyl-tRNA synthetase [Haemophilus somnus 2336]
Length = 874
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 68/135 (50%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+S+S+G A ++LD + FYAE GGQI D G +I N
Sbjct: 479 VESISAGQSAVVILDDTPFYAESGGQIGDRGCLIATN----------------------- 515
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
++F + + +K ++ + TL TL VG + +DT R NH+ATH+L+ AL
Sbjct: 516 --MRFDVKDTQKYGQVFGHIGTLIQGTLNVGQTINAVVDTEHRIKTSLNHSATHLLHAAL 573
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 574 RQVLGSHVAQKGSLV 588
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 29/38 (76%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
VL G+VA++LYDTYGFP+DLT + E+ + +D E +E
Sbjct: 388 VLSGEVAFKLYDTYGFPLDLTADVCRERNIRIDEEGFE 425
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%)
Query: 232 YNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
Y + V+S+S+G A ++LD + FYAE GGQI D G +I N
Sbjct: 474 YEGKSVESISAGQSAVVILDDTPFYAESGGQIGDRGCLIATN 515
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM--SNKQF 325
+ V L Y + V+S+S+G A ++LD + FYAE GGQI D G + +N +F
Sbjct: 466 QAKVTALFYEGKSVESISAGQSAVVILDDTPFYAESGGQIGDRGCLIATNMRF 518
>gi|456354265|dbj|BAM88710.1| alanyl-tRNA synthetase [Agromonas oligotrophica S58]
Length = 921
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 27/136 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDS+ +G I+L+++ FY E GGQ+ D G + G
Sbjct: 509 VDSLKAGESGAIVLNQTPFYGESGGQVGDTGVLSGDG----------------------- 545
Query: 386 IFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
++F +++ +KK V + TL++G L+L +D RR I +NH+ATHIL+ A
Sbjct: 546 --IKFRVTDTQKKAGDLFVHIGTVEQGTLKLGSALQLDVDHGRRSAIRANHSATHILHEA 603
Query: 444 LRFVLGPEADQKGSLV 459
LR VLG Q+GSLV
Sbjct: 604 LRQVLGDHIAQRGSLV 619
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
A L + + GDVA+ LYDTYGFP+DLTQ ++ +G+SVD + DA + +++ +
Sbjct: 405 AGLQKGDMFDGDVAFTLYDTYGFPLDLTQDALKSRGISVDQASFTDAMDRQRAKARA 461
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
EG V L + VDS+ +G I+L+++ FY E GGQ+ D G +S
Sbjct: 496 EGAVTALIKDGAEVDSLKAGESGAIVLNQTPFYGESGGQVGDTGVLS 542
>gi|424800805|ref|ZP_18226347.1| Alanyl-tRNA synthetase [Cronobacter sakazakii 696]
gi|423236526|emb|CCK08217.1| Alanyl-tRNA synthetase [Cronobacter sakazakii 696]
Length = 839
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ V++G +A ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 444 VEQVTAGQQAVVVLDETPFYAESGGQVGDKG-------------------ELKGNGFT-- 482
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++++ +K + + + L S L+VG+ +K +D ARR I NH+ATH+++ AL
Sbjct: 483 ----FTVNDTQKYGQAIGHIGELASGVLKVGEGVKAEVDHARRDRIRLNHSATHLMHAAL 538
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 539 RQVLGTHVAQKGSLV 553
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +G
Sbjct: 353 TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNA 412
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++ + EF G H + V + S E + G V + G + D
Sbjct: 413 MIRVDGASEFKGYDHTELTAKVTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGD 472
Query: 121 E 121
+
Sbjct: 473 K 473
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAG 336
V L + + V+ V++G +A ++LD++ FYAE GGQ+ D+G + F +V+ + G
Sbjct: 434 VTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFTVNDTQKYG 492
Score = 38.1 bits (87), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 6/44 (13%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDE------GFMIGVND 274
V+ V++G +A ++LD++ FYAE GGQ+ D+ GF VND
Sbjct: 444 VEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFTVND 487
>gi|374297120|ref|YP_005047311.1| alanyl-tRNA synthetase [Clostridium clariflavum DSM 19732]
gi|359826614|gb|AEV69387.1| alanyl-tRNA synthetase [Clostridium clariflavum DSM 19732]
Length = 879
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 97/220 (44%), Gaps = 33/220 (15%)
Query: 247 GILLDKSNFYAEQGG-QIYDEGFMIGVNDEGTVVGLRYNKQ----FVDSVSSGTEAGILL 301
G +D + AE+ G + +EGF + + Y K+ + D + S + I
Sbjct: 398 GFPIDLTREIAEESGLSVDEEGFREEMEKHRKIAKEDYLKKQGSAWSDDIYSTLDKNI-- 455
Query: 302 DKSNF--YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 359
K+ F Y+E + + N Q +S + G E ++LD++ FYAE GGQ+ D+G +
Sbjct: 456 -KTEFLGYSENAAEAKVMYIIKNDQVTESATEGDEVILILDRTPFYAESGGQVGDKGVI- 513
Query: 360 GVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLK 419
+ ++++ E KY L + + ++VG +K
Sbjct: 514 ---ESEEVKIKVEDCKKTEDGKY-----LHYGVVE--------------KGNVKVGASVK 551
Query: 420 LHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
ID RR I NHT TH+L AL+ VLG Q GSLV
Sbjct: 552 AAIDAKRRMAIARNHTTTHLLQKALKNVLGDHVHQAGSLV 591
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKK 55
K SK + G++A+ L+ TYGFP+DLT+ + EE GLSVD E + + +K
Sbjct: 377 TKAKNSKTITGEMAFELHGTYGFPIDLTREIAEESGLSVDEEGFREEMEK 426
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 25/37 (67%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N Q +S + G E ++LD++ FYAE GGQ+ D+G +
Sbjct: 477 NDQVTESATEGDEVILILDRTPFYAESGGQVGDKGVI 513
>gi|433775681|ref|YP_007306148.1| alanine--tRNA ligase [Mesorhizobium australicum WSM2073]
gi|433667696|gb|AGB46772.1| alanine--tRNA ligase [Mesorhizobium australicum WSM2073]
Length = 888
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 27/154 (17%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
E + + + VDS G ++++++ FY E GGQ+ D G + G
Sbjct: 470 EALVKDGKTVDSAGKGDAVAVVVNQTPFYGESGGQMGDTGIISG---------------- 513
Query: 377 LEGSKYALPIFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNH 434
EG +S+ +KK V L ++ T+R G ++L +D ARR + +NH
Sbjct: 514 -EG--------FSIEISDTQKKADGLFVHLGKVVAGTVRPGAAVELKVDHARRSRLRANH 564
Query: 435 TATHILNHALRFVLGPEADQKGSLVYRYHLHENI 468
+ATH+++ ALR VLG QKGSLV L +I
Sbjct: 565 SATHLIHEALREVLGTHVAQKGSLVAPERLRFDI 598
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 40/57 (70%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
+ KLG +L G+ A++LYDTYGFP+DLTQ + ++ +SVD+ + +A ++ ++E
Sbjct: 372 EATEKLGAGDMLDGETAFKLYDTYGFPLDLTQDALRQRSISVDLAGFTNAMEQQKAE 428
>gi|156932779|ref|YP_001436696.1| alanyl-tRNA synthetase [Cronobacter sakazakii ATCC BAA-894]
gi|205830089|sp|A7MJ41.1|SYA_CROS8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|156531033|gb|ABU75859.1| hypothetical protein ESA_00569 [Cronobacter sakazakii ATCC BAA-894]
Length = 875
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ V++G +A ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEQVTAGQQAVVVLDETPFYAESGGQVGDKG-------------------ELKGNGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++++ +K + + + L S L+VG+ +K +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FTVNDTQKYGQAIGHIGELASGVLKVGEGVKAEVDHARRDRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNA 448
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++ + EF G H + V + S E + G V + G + D
Sbjct: 449 MIRVDGASEFKGYDHTELTAKVTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGD 508
Query: 121 E 121
+
Sbjct: 509 K 509
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAG 336
V L + + V+ V++G +A ++LD++ FYAE GGQ+ D+G + F +V+ + G
Sbjct: 470 VTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFTVNDTQKYG 528
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 6/44 (13%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDE------GFMIGVND 274
V+ V++G +A ++LD++ FYAE GGQ+ D+ GF VND
Sbjct: 480 VEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFTVND 523
>gi|116872933|ref|YP_849714.1| alanyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123461085|sp|A0AIV3.1|SYA_LISW6 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|116741811|emb|CAK20935.1| alanyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 879
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + VD V+SG A ++ ++ FYAE GGQ+ D+G + ES+ L + V
Sbjct: 474 IIQDDALVDEVASGKTAQVIFKETPFYAESGGQVADKGTI-----ESETGLAYVEDVQKA 528
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+K NL + + L+ GD +KL +D +RR + NHTATH
Sbjct: 529 PNK-----------QNLHR-------ISVKEGVLKTGDTVKLAVDKVKRRETIKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 571 LLHRALKDTLGEHVNQAGSLV 591
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD-------MEVYE 50
+L+TI AK +V+ G ++LYDT+GFPV+LT+ E+ GL VD M+
Sbjct: 371 ILETILKTAKETNEQVIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKEQR 430
Query: 51 DAKKKAQSEPESQ-------AGMETSVEFCG---GTHLA-MAHHVGDFCISSEEAIAKGS 99
D + A+++ +S A + EF G H++ + + + D + E A K +
Sbjct: 431 DRARSARADVKSMQVQGELLANLTAKSEFVGYNATEHVSEILYIIQDDALVDEVASGKTA 490
Query: 100 NIV-----------SYCGSKGTFQSHSGSINDEMVNKYPSLYRLFRTVHKQ 139
++ KGT +S +G E V K P+ L R K+
Sbjct: 491 QVIFKETPFYAESGGQVADKGTIESETGLAYVEDVQKAPNKQNLHRISVKE 541
>gi|429115756|ref|ZP_19176674.1| Alanyl-tRNA synthetase [Cronobacter sakazakii 701]
gi|426318885|emb|CCK02787.1| Alanyl-tRNA synthetase [Cronobacter sakazakii 701]
Length = 856
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ V++G +A ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEQVTAGQQAVVVLDETPFYAESGGQVGDKG-------------------ELKGNGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++++ +K + + + L S L+VG+ +K +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FTVNDTQKYGQAIGHIGELASGVLKVGEGVKAEVDHARRDRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNA 448
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++ + EF G H + V + S E + G V + G + D
Sbjct: 449 MIRVDGASEFKGYDHTELTAKVTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGD 508
Query: 121 E 121
+
Sbjct: 509 K 509
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAG 336
V L + + V+ V++G +A ++LD++ FYAE GGQ+ D+G + F +V+ + G
Sbjct: 470 VTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFTVNDTQKYG 528
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 6/44 (13%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDE------GFMIGVND 274
V+ V++G +A ++LD++ FYAE GGQ+ D+ GF VND
Sbjct: 480 VEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFTVND 523
>gi|384491657|gb|EIE82853.1| alanyl-tRNA synthetase [Rhizopus delemar RA 99-880]
Length = 955
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 69/125 (55%), Gaps = 24/125 (19%)
Query: 336 GILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNL 395
G+LLDK+NFYAE GGQ +D G S++ L+G+ +F++ +
Sbjct: 524 GLLLDKTNFYAESGGQEFDIG----------------SIITLDGNS-------EFAVQDC 560
Query: 396 KKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQ 454
+ V + L + L + + +++ D RR P+ +NHTATHILN ALR VL + DQ
Sbjct: 561 QLYGGYVLHVGHLKYGQLSIDEDVEVSYDDTRRSPLRNNHTATHILNFALREVLQDDIDQ 620
Query: 455 KGSLV 459
KGSLV
Sbjct: 621 KGSLV 625
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/35 (71%), Positives = 28/35 (80%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD 45
S VL GD WRLYDTYGFPVDLT++M EE GL V+
Sbjct: 405 STVLSGDDVWRLYDTYGFPVDLTRIMAEENGLEVN 439
>gi|422409733|ref|ZP_16486694.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
gi|313608702|gb|EFR84533.1| alanyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
Length = 879
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 72/141 (51%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + V+ V++G+EA ++ ++ FYAE GGQ+ D+G + ES+ L + V
Sbjct: 474 LIQDDTLVEEVAAGSEAQVIFKETPFYAESGGQVADKGTI-----ESETGLAYVEDVQKA 528
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+K NL + + L+ GD +KL +D +RR + NHTATH
Sbjct: 529 PNK-----------QNLHR-------VSVKEGVLKTGDTVKLAVDKVKRRETIKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 571 LLHRALKDTLGEHVNQAGSLV 591
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 32/171 (18%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD-------MEVYE 50
+L+TI AK +++ G ++LYDT+GFPV+LT+ E+ GL VD M+
Sbjct: 371 ILETILKTAKETNEQIIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKEQR 430
Query: 51 DAKKKAQSEPESQ-------AGMETSVEFCG---GTHLA-MAHHVGDFCISSEEAIAKGS 99
D + A+++ +S A + F G H++ + + + D + E A +
Sbjct: 431 DRARSARADVKSMQVQGELLANLTEKSAFVGYNSTEHVSEILYLIQDDTLVEEVAAGSEA 490
Query: 100 NIV-----------SYCGSKGTFQSHSGSINDEMVNKYPSLYRLFRTVHKQ 139
++ KGT +S +G E V K P+ L R K+
Sbjct: 491 QVIFKETPFYAESGGQVADKGTIESETGLAYVEDVQKAPNKQNLHRVSVKE 541
>gi|429120426|ref|ZP_19181103.1| Alanyl-tRNA synthetase [Cronobacter sakazakii 680]
gi|426325169|emb|CCK11840.1| Alanyl-tRNA synthetase [Cronobacter sakazakii 680]
Length = 875
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ V++G +A ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEQVTAGQQAVVVLDETPFYAESGGQVGDKG-------------------ELKGNGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++++ +K + + + L S L+VG+ +K +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FTVNDTQKYGQAIGHIGELASGVLKVGEGVKAEVDHARRDRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNA 448
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++ + EF G H + V + S E + G V + G + D
Sbjct: 449 MIRVDGASEFKGYDHTELTAKVTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGD 508
Query: 121 E 121
+
Sbjct: 509 K 509
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAG 336
V L + + V+ V++G +A ++LD++ FYAE GGQ+ D+G + F +V+ + G
Sbjct: 470 VTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFTVNDTQKYG 528
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 6/44 (13%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDE------GFMIGVND 274
V+ V++G +A ++LD++ FYAE GGQ+ D+ GF VND
Sbjct: 480 VEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFTVND 523
>gi|238756253|ref|ZP_04617569.1| Alanyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
gi|238705508|gb|EEP97909.1| Alanyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
Length = 874
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 74/149 (49%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N + VD V +G +A ++L+++ FY E GGQ+ DEG +
Sbjct: 471 ALFRNGEAVDEVHTGEDAVVVLNQTPFYGESGGQVGDEGVL------------------- 511
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
K A+ F+ +S+ +K + + L LS LRV D + +D+ RR I NH+A
Sbjct: 512 ---KSAMADFI---VSDTQKYGQAIGHLGQLSRGILRVNDSVDAVVDSMRRNRIRLNHSA 565
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR LG QKGSLV +L
Sbjct: 566 THLLHAALRKTLGEHVAQKGSLVNDKYLR 594
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 70/163 (42%), Gaps = 15/163 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ L VD +E A + + +G
Sbjct: 388 TLDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSGFGADYNS 447
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++T+ EF G H+ V + E + + G + V + G + D
Sbjct: 448 LIRVDTASEFLGYDHIEQQATVIALFRNGEAVDEVHTGEDAVVVLNQTPFYGESGGQVGD 507
Query: 121 EMVNKYPSLYRLFRTVHKQKYVQDALNVSCLSFRGVWEHGMSV 163
E V K S F QKY Q ++ LS RG+ SV
Sbjct: 508 EGVLK--SAMADFIVSDTQKYGQAIGHLGQLS-RGILRVNDSV 547
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS 331
+ + TV+ L N + VD V +G +A ++L+++ FY E GGQ+ DEG + + D + S
Sbjct: 463 IEQQATVIALFRNGEAVDEVHTGEDAVVVLNQTPFYGESGGQVGDEGVLKSA-MADFIVS 521
Query: 332 GTE 334
T+
Sbjct: 522 DTQ 524
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 26/37 (70%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N + VD V +G +A ++L+++ FY E GGQ+ DEG +
Sbjct: 475 NGEAVDEVHTGEDAVVVLNQTPFYGESGGQVGDEGVL 511
>gi|417792180|ref|ZP_12439571.1| alanyl-tRNA synthetase [Cronobacter sakazakii E899]
gi|449307106|ref|YP_007439462.1| alanyl-tRNA ligase [Cronobacter sakazakii SP291]
gi|333953744|gb|EGL71655.1| alanyl-tRNA synthetase [Cronobacter sakazakii E899]
gi|449097139|gb|AGE85173.1| alanyl-tRNA ligase [Cronobacter sakazakii SP291]
Length = 875
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ V++G +A ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEQVTAGQQAVVVLDETPFYAESGGQVGDKG-------------------ELKGNGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++++ +K + + + L S L+VG+ +K +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FTVNDTQKYGQAIGHIGELASGVLKVGEGVKAEVDHARRDRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNA 448
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++ + EF G H + V + S E + G V + G + D
Sbjct: 449 MIRVDGASEFKGYDHTELTAKVTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGD 508
Query: 121 E 121
+
Sbjct: 509 K 509
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAG 336
V L + + V+ V++G +A ++LD++ FYAE GGQ+ D+G + F +V+ + G
Sbjct: 470 VTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFTVNDTQKYG 528
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 6/44 (13%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDE------GFMIGVND 274
V+ V++G +A ++LD++ FYAE GGQ+ D+ GF VND
Sbjct: 480 VEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFTVND 523
>gi|389839827|ref|YP_006341911.1| alanyl-tRNA synthetase [Cronobacter sakazakii ES15]
gi|387850303|gb|AFJ98400.1| alanyl-tRNA synthetase [Cronobacter sakazakii ES15]
Length = 875
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ V++G +A ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEQVTAGQQAVVVLDETPFYAESGGQVGDKG-------------------ELKGNGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++++ +K + + + L S L+VG+ +K +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FTVNDTQKYGQAIGHIGELASGVLKVGEGVKAEVDHARRDRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 52/121 (42%), Gaps = 12/121 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARESSGFGADYNA 448
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++ + EF G H + V + S E + G V + G + D
Sbjct: 449 MIRVDGASEFKGYDHTELTAKVTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGD 508
Query: 121 E 121
+
Sbjct: 509 K 509
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAG 336
V L + + V+ V++G +A ++LD++ FYAE GGQ+ D+G + F +V+ + G
Sbjct: 470 VTALFVDGKSVEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFTVNDTQKYG 528
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 29/44 (65%), Gaps = 6/44 (13%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDE------GFMIGVND 274
V+ V++G +A ++LD++ FYAE GGQ+ D+ GF VND
Sbjct: 480 VEQVTAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFTVND 523
>gi|169343614|ref|ZP_02864613.1| alanyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
gi|169298174|gb|EDS80264.1| alanyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
Length = 879
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+N++F + G E +L DK+ FYAE GGQ+ D G + E+ + + N+ G
Sbjct: 476 NNEEFKAELKEGEEGFLLTDKTPFYAEMGGQVGDRG---NITSETGMAIVTDCKKNVGG- 531
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
K V + + +L+ G ++KL +D +RR I NHTATH+L
Sbjct: 532 -------------------KFVHYIKVIEGSLKEGQEVKLSVDASRRSNICKNHTATHML 572
Query: 441 NHALRFVLGPEADQKGSLVYRYHLH 465
+ AL+ VLG +Q GS V L
Sbjct: 573 HEALKEVLGDHVNQSGSYVDEERLR 597
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETS 69
KVL G A++LYDTYGFP++LTQ ++EEK L +D+E + + + K Q E A E+S
Sbjct: 383 KVLSGAKAFKLYDTYGFPLELTQEILEEKCLELDIENF-NKEMKEQRERARNARGESS 439
>gi|192292738|ref|YP_001993343.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
gi|192286487|gb|ACF02868.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
Length = 889
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 25/141 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++ +G I+++++ FYAE GGQ+ D G + +G ++ +
Sbjct: 479 VDALKAGESGAIIVNQTPFYAESGGQVGDTGVLTA-----------------DGVRFVVT 521
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
+KK L T+ ++++GD L L +D ARR I +NH+ATH+L+ AL
Sbjct: 522 -------DTMKKAGDLFVHFGTVEQGSIKLGDALALDVDHARRSAIRANHSATHLLHEAL 574
Query: 445 RFVLGPEADQKGSLVYRYHLH 465
R VLG QKGSLV L
Sbjct: 575 RQVLGDHIAQKGSLVAPDRLR 595
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
A L + + G+ A+ LYDTYGFP+DLTQ + +G++VD+ + DA + +++ +
Sbjct: 375 AGLKKGDMFDGETAFTLYDTYGFPLDLTQDALRNRGINVDIASFTDAMDRQRAKARA 431
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
EG V L + VD++ +G I+++++ FYAE GGQ+ D G ++
Sbjct: 466 EGVVTALVKDGAEVDALKAGESGAIIVNQTPFYAESGGQVGDTGVLT 512
>gi|429081567|ref|ZP_19144669.1| Alanyl-tRNA synthetase [Cronobacter condimenti 1330]
gi|426549702|emb|CCJ70710.1| Alanyl-tRNA synthetase [Cronobacter condimenti 1330]
Length = 875
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 76/135 (56%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ +++G +A ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEQIAAGQQAVVVLDETPFYAESGGQVGDKG-------------------ELKGNGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++++ +K + + + L S L++G+ +K +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FTVNDTQKYGQAIGHIGELASGVLKIGEGVKAEVDEARRNRIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 13/131 (9%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-KGDTLDGETAFRLYDTYGFPVDLTADVCRERNIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGT 110
+G ++ + EF G H + V + + E IA G V
Sbjct: 439 SSGFGADYNAMIRVDGASEFKGYDHTELTAKVTALFVDGKAVEQIAAGQQAVVVLDETPF 498
Query: 111 FQSHSGSINDE 121
+ G + D+
Sbjct: 499 YAESGGQVGDK 509
Score = 39.3 bits (90), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAG 336
V L + + V+ +++G +A ++LD++ FYAE GGQ+ D+G + F +V+ + G
Sbjct: 470 VTALFVDGKAVEQIAAGQQAVVVLDETPFYAESGGQVGDKGELKGNGFTFTVNDTQKYG 528
>gi|419802642|ref|ZP_14327827.1| alanine--tRNA ligase [Haemophilus parainfluenzae HK262]
gi|385189824|gb|EIF37279.1| alanine--tRNA ligase [Haemophilus parainfluenzae HK262]
Length = 874
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 69/135 (51%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDS+++G A ++L+ + FYAE GGQI D G++
Sbjct: 479 VDSITAGQSAVVILENTPFYAESGGQIGDSGYLTSQG----------------------- 515
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
+QF++ + +K ++ + L TL+VG L +D ARR NH+ATH+L+ AL
Sbjct: 516 --IQFNVKDTQKYGQVFGHIGELEQGTLKVGQTLNAVVDAARRNQTSLNHSATHLLHAAL 573
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 574 RQVLGHHVVQKGSLV 588
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGME 67
VL G+VA++LYDTYGFP+DLT + E+ +++D +E ++ +++ SQ GM+
Sbjct: 388 VLSGEVAFKLYDTYGFPLDLTADVCRERDIAIDEAGFEREMEAQRLRAQSASQFGMD 444
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 33/46 (71%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
V L ++ + VDS+++G A ++L+ + FYAE GGQI D G+++++
Sbjct: 469 VTALFHDGKSVDSITAGQSAVVILENTPFYAESGGQIGDSGYLTSQ 514
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 219 TKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV 278
T+ K ++ + VDS+++G A ++L+ + FYAE GGQI D G++ T
Sbjct: 461 TESESLAKVTALFHDGKSVDSITAGQSAVVILENTPFYAESGGQIGDSGYL-------TS 513
Query: 279 VGLRYN 284
G+++N
Sbjct: 514 QGIQFN 519
>gi|168207852|ref|ZP_02633857.1| alanyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
gi|170660832|gb|EDT13515.1| alanyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
Length = 879
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+N++F + G E +L DK+ FYAE GGQ+ D G + E+ + + N+ G
Sbjct: 476 NNEEFKAELKEGEEGFLLTDKTPFYAEMGGQVGDRG---NITSETGMAIVTDCKKNVGG- 531
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
K V + + +L+ G ++KL +D +RR I NHTATH+L
Sbjct: 532 -------------------KFVHYIKVIEGSLKEGQEVKLSVDASRRSNICKNHTATHML 572
Query: 441 NHALRFVLGPEADQKGSLVYRYHLH 465
+ AL+ VLG +Q GS V L
Sbjct: 573 HEALKEVLGDHVNQSGSYVDEERLR 597
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETS 69
KVL G A++LYDTYGFP++LTQ ++EEKGL +D+E + + + K Q E A E+S
Sbjct: 383 KVLSGAKAFKLYDTYGFPLELTQEILEEKGLELDIENF-NKEMKEQRERARNARGESS 439
>gi|182625718|ref|ZP_02953487.1| alanyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
gi|177909120|gb|EDT71595.1| alanyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
Length = 879
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+N++F + G E +L DK+ FYAE GGQ+ D G + E+ + + N+ G
Sbjct: 476 NNEEFKAELKEGEEGFLLTDKTPFYAEMGGQVGDRG---NITSETGMAIVTDCKKNVGG- 531
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
K V + + +L+ G ++KL +D +RR I NHTATH+L
Sbjct: 532 -------------------KFVHYIKVIEGSLKEGQEVKLSVDASRRSNICKNHTATHML 572
Query: 441 NHALRFVLGPEADQKGSLVYRYHLH 465
+ AL+ VLG +Q GS V L
Sbjct: 573 HEALKEVLGDHVNQSGSYVDEERLR 597
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETS 69
KVL G A++LYDTYGFP++LTQ ++EEKGL +D+E + + + K Q E A E+S
Sbjct: 383 KVLSGAKAFKLYDTYGFPLELTQEILEEKGLELDIENF-NKEMKEQRERARNARGESS 439
>gi|39936908|ref|NP_949184.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
gi|48428511|sp|P61706.1|SYA_RHOPA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|39650765|emb|CAE29288.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
Length = 889
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 71/141 (50%), Gaps = 25/141 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++ +G I+++++ FYAE GGQ+ D G + +G ++ +
Sbjct: 479 VDALKAGESGAIIVNQTPFYAESGGQVGDTGVLTA-----------------DGVRFVVT 521
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
+KK L T+ ++++GD L L +D ARR I +NH+ATH+L+ AL
Sbjct: 522 -------DTMKKAGDLFVHFGTVEQGSIKLGDALALDVDHARRSAIRANHSATHLLHEAL 574
Query: 445 RFVLGPEADQKGSLVYRYHLH 465
R VLG QKGSLV L
Sbjct: 575 RQVLGDHIAQKGSLVAPDRLR 595
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
A L + + G+ A+ LYDTYGFP+DLTQ + +G++VD+ + DA + +++ +
Sbjct: 375 AGLKKGDMFDGETAFTLYDTYGFPLDLTQDALRNRGINVDIASFTDAMDRQRAKARA 431
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
EG V L + VD++ +G I+++++ FYAE GGQ+ D G ++
Sbjct: 466 EGVVTALVKDGAEVDALKAGESGAIIVNQTPFYAESGGQVGDTGVLT 512
>gi|18310762|ref|NP_562696.1| alanyl-tRNA synthetase [Clostridium perfringens str. 13]
gi|168218241|ref|ZP_02643866.1| alanyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
gi|422346449|ref|ZP_16427363.1| alanyl-tRNA synthetase [Clostridium perfringens WAL-14572]
gi|20532247|sp|Q8XJH6.1|SYA_CLOPE RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|18145443|dbj|BAB81486.1| alanine-tRNA ligase [Clostridium perfringens str. 13]
gi|182379737|gb|EDT77216.1| alanyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
gi|373225994|gb|EHP48321.1| alanyl-tRNA synthetase [Clostridium perfringens WAL-14572]
Length = 879
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+N++F + G E +L DK+ FYAE GGQ+ D G + E+ + + N+ G
Sbjct: 476 NNEEFKAELKEGEEGFLLTDKTPFYAEMGGQVGDRG---NITSETGMAIVTDCKKNVGG- 531
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
K V + + +L+ G ++KL +D +RR I NHTATH+L
Sbjct: 532 -------------------KFVHYIKVIEGSLKEGQEVKLSVDASRRSNICKNHTATHML 572
Query: 441 NHALRFVLGPEADQKGSLVYRYHLH 465
+ AL+ VLG +Q GS V L
Sbjct: 573 HEALKEVLGDHVNQSGSYVDEERLR 597
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETS 69
KVL G A++LYDTYGFP++LTQ ++EEKGL +D+E + + + K Q E A E+S
Sbjct: 383 KVLSGAKAFKLYDTYGFPLELTQEILEEKGLELDIENF-NKEMKEQRERARNARGESS 439
>gi|307730458|ref|YP_003907682.1| alanyl-tRNA synthetase [Burkholderia sp. CCGE1003]
gi|307584993|gb|ADN58391.1| alanyl-tRNA synthetase [Burkholderia sp. CCGE1003]
Length = 890
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 27/136 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V V+ G + ++LD + FYAE GGQ+ D+G + +
Sbjct: 495 VQEVAHGQQTVVVLDHTPFYAESGGQVGDQGLLANAS----------------------- 531
Query: 386 IFLQFSLSN-LKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
++F++++ LK + +V TL TL+VGD +K ID RR NH+ATH+++ A
Sbjct: 532 --VRFAVTDTLKVQADVVGHHGTLEQGTLKVGDVVKAEIDAVRRARTARNHSATHLMHKA 589
Query: 444 LRFVLGPEADQKGSLV 459
LR VLG QKGSLV
Sbjct: 590 LREVLGSHVQQKGSLV 605
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 43/67 (64%), Gaps = 2/67 (2%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGMET 68
++ L G++A++L+DTYGFP+DLT + E+ ++VD +++ A+++ Q+ + M
Sbjct: 402 ARTLDGELAFKLHDTYGFPLDLTADVCREREVTVDEAAFDEAMARQREQARAAGKFKMSQ 461
Query: 69 SVEFCGG 75
+E+ G
Sbjct: 462 GLEYSGA 468
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
V D+ VV L + V V+ G + ++LD + FYAE GGQ+ D+G ++N
Sbjct: 479 VFDDAKVVALYVDGASVQEVAHGQQTVVVLDHTPFYAESGGQVGDQGLLAN 529
>gi|323526792|ref|YP_004228945.1| alanyl-tRNA synthetase [Burkholderia sp. CCGE1001]
gi|323383794|gb|ADX55885.1| alanyl-tRNA synthetase [Burkholderia sp. CCGE1001]
Length = 890
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 70/136 (51%), Gaps = 27/136 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V V+ G +A ++LD + FYAE GGQ+ D+G + +
Sbjct: 495 VQEVAQGQQAVVVLDHTPFYAESGGQVGDQGLLANAS----------------------- 531
Query: 386 IFLQFSLSN-LKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
++F++++ LK + +V TL L+VGD +K ID RR NH+ATH+++ A
Sbjct: 532 --VRFAVADTLKVQADVVGHHGTLEQGILKVGDVVKAEIDAVRRARTARNHSATHLMHKA 589
Query: 444 LRFVLGPEADQKGSLV 459
LR VLG QKGSLV
Sbjct: 590 LREVLGSHVQQKGSLV 605
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGMETS 69
K L G++A++L+DTYGFP+DLT + E+ ++VD +++ A+++ Q+ + M
Sbjct: 403 KTLDGELAFKLHDTYGFPLDLTADVCREREVTVDEAAFDEAMARQREQARAAGKFKMAQG 462
Query: 70 VEFCGG 75
+E+ G
Sbjct: 463 LEYSGA 468
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
V D+ VV L + V V+ G +A ++LD + FYAE GGQ+ D+G ++N
Sbjct: 479 VFDDAKVVALYVDGASVQEVAQGQQAVVVLDHTPFYAESGGQVGDQGLLAN 529
>gi|410646584|ref|ZP_11357034.1| alanyl-tRNA synthetase [Glaciecola agarilytica NO2]
gi|410133756|dbj|GAC05433.1| alanyl-tRNA synthetase [Glaciecola agarilytica NO2]
Length = 865
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 72/148 (48%), Gaps = 37/148 (25%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q V +++GTE I+LD+S FYAE GGQ D G + V D E+
Sbjct: 469 QSVAEITAGTEGTIILDESPFYAEAGGQAGDAGTL--VKDSGGFEV-------------- 512
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHT------LRVGDKLKLHIDTARRRPIMSNHTAT 437
+ VKL ++H L+VGD ++ +++ ARR I NH+AT
Sbjct: 513 ---------------QDTVKLGKAIAHKGAALSELKVGDSVQANVNGARRHAIKLNHSAT 557
Query: 438 HILNHALRFVLGPEADQKGSLVYRYHLH 465
H+++ AL+ VLG +QKGSLV L
Sbjct: 558 HLMHAALKSVLGEHVNQKGSLVQPERLR 585
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 4/52 (7%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA----KKKAQ 57
E KV+PG++ ++LYDTYGFP DLT + EKGLS+D E +E A +K+AQ
Sbjct: 377 EGKVVPGELVFKLYDTYGFPADLTNDVAREKGLSIDEEGFEQAMAEQRKRAQ 428
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 25/36 (69%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
Q V +++GTE I+LD+S FYAE GGQ D G ++
Sbjct: 469 QSVAEITAGTEGTIILDESPFYAEAGGQAGDAGTLV 504
>gi|217964349|ref|YP_002350027.1| alanyl-tRNA synthetase [Listeria monocytogenes HCC23]
gi|386008275|ref|YP_005926553.1| alaS [Listeria monocytogenes L99]
gi|386026877|ref|YP_005947653.1| alanyl-tRNA synthetase [Listeria monocytogenes M7]
gi|217333619|gb|ACK39413.1| alanyl-tRNA synthetase [Listeria monocytogenes HCC23]
gi|307571085|emb|CAR84264.1| alaS [Listeria monocytogenes L99]
gi|336023458|gb|AEH92595.1| alanyl-tRNA synthetase [Listeria monocytogenes M7]
Length = 879
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 73/141 (51%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + V+ V++G+EA ++ ++ FYAE GGQ+ D+G + ES+ + L +E
Sbjct: 474 LIQDDTLVEEVAAGSEAQVIFKETPFYAESGGQVADKGTI-----ESE-----TGLAYVE 523
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
+ A K+ + + L+ GD +KL +D +RR + NHTATH
Sbjct: 524 DVQKA-------------PNKQNIHRVSVKEGVLKTGDTVKLAVDKVKRRETIKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ LG +Q GSLV
Sbjct: 571 LLHRALKDTLGEHVNQAGSLV 591
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+L+TI AK +++ G ++LYDT+GFPV+LT+ E+ GL VD +E K+ +
Sbjct: 371 ILETILKTAKETNEQIIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKEQR 430
Query: 58 SEPESQAGMETSVEFCG 74
S S++ G
Sbjct: 431 DRARSARADVKSMQVQG 447
>gi|146086823|ref|XP_001465654.1| putative alanyl-tRNA synthetase [Leishmania infantum JPCM5]
gi|398015391|ref|XP_003860885.1| alanyl-tRNA synthetase, putative [Leishmania donovani]
gi|134069753|emb|CAM68079.1| putative alanyl-tRNA synthetase [Leishmania infantum JPCM5]
gi|322499108|emb|CBZ34180.1| alanyl-tRNA synthetase, putative [Leishmania donovani]
Length = 962
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 113/248 (45%), Gaps = 51/248 (20%)
Query: 240 VSSGTEAGILLDKSNF-------YAEQGGQIYD-EGFMIGVNDEGTVVG-LRYNKQFVDS 290
V SG+EA +L D+ F AE+ G D EGF + + G + K F+D+
Sbjct: 409 VISGSEAFVLHDRYGFPVDLTCLLAEKDGMTVDLEGFNAEMKESKVSAGRVAATKTFIDA 468
Query: 291 --VSSGTEAGILL--DKSNFYAEQGG----QIYDEGFMSNKQFVDSVSSGTE-----AGI 337
+ GI D + + E I+D+ N +F+ + G + GI
Sbjct: 469 YQLEELKTRGIPQTDDAAKYVWEDSTGDLLAIFDK---KNSKFISLLEPGNDLGAEGVGI 525
Query: 338 LLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKK 397
+L +NFYAE GGQ+YD G ++ +D S E+ + N+ G Y + + NL K
Sbjct: 526 ILSTTNFYAESGGQVYDTGRLVAASD-SVFEV--KKVYNVAG--YVVHV------GNLSK 574
Query: 398 KKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEAD---- 453
+ ++ ++L +D RR PI +NHT TH LN LR VLG + D
Sbjct: 575 DS---------ASSIPSSAVVQLQVDYERRLPIAANHTTTHQLNWVLRRVLGEKPDNFTE 625
Query: 454 --QKGSLV 459
QKGSLV
Sbjct: 626 VQQKGSLV 633
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGM 66
+ SKV+ G A+ L+D YGFPVDLT L+ E+ G++VD+E + K+++ A
Sbjct: 403 RANNSKVISGSEAFVLHDRYGFPVDLTCLLAEKDGMTVDLEGFNAEMKESKVSAGRVAAT 462
Query: 67 ETSVE 71
+T ++
Sbjct: 463 KTFID 467
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 233 NKQFVDSVSSGTE-----AGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYN 284
N +F+ + G + GI+L +NFYAE GGQ+YD G ++ +D V YN
Sbjct: 505 NSKFISLLEPGNDLGAEGVGIILSTTNFYAESGGQVYDTGRLVAASDSVFEVKKVYN 561
>gi|404370845|ref|ZP_10976162.1| alanyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
gi|226913031|gb|EEH98232.1| alanyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
Length = 879
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 71/139 (51%), Gaps = 23/139 (16%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
++ FVD +S G + I+ DK+ FYAE GGQ+ D+G + + E+ + + + N+ G
Sbjct: 476 NDNNFVDELSKGEKGYIVTDKTPFYAEMGGQVGDKGIIKTASGEAYV---YDTKKNVGG- 531
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
K + + + T+++ ++ L ID RR I NHTATH+L
Sbjct: 532 -------------------KTIHYVKVVEGTIKINEEANLKIDVLRRNNIAKNHTATHML 572
Query: 441 NHALRFVLGPEADQKGSLV 459
+ AL+ V+G +Q GS V
Sbjct: 573 HEALKQVVGKHVNQAGSYV 591
Score = 42.4 bits (98), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 10/89 (11%)
Query: 206 FIGSDTG-LGDLSQTKHTPFV---------KRLRFSYNKQFVDSVSSGTEAGILLDKSNF 255
++GSD + + + +T F+ K L + + FVD +S G + I+ DK+ F
Sbjct: 440 YMGSDENPINKIDASINTEFIGYDNIEVNSKILVLANDNNFVDELSKGEKGYIVTDKTPF 499
Query: 256 YAEQGGQIYDEGFMIGVNDEGTVVGLRYN 284
YAE GGQ+ D+G + + E V + N
Sbjct: 500 YAEMGGQVGDKGIIKTASGEAYVYDTKKN 528
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 36/54 (66%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
K L G+ A++LYDTYGFP++LT+ ++EEKG++VD E + + + S G
Sbjct: 383 KTLKGEKAFKLYDTYGFPIELTEEILEEKGMNVDYEAFRKEMDEQRQRARSARG 436
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
++ L + FVD +S G + I+ DK+ FYAE GGQ+ D+G +
Sbjct: 471 ILVLANDNNFVDELSKGEKGYIVTDKTPFYAEMGGQVGDKGII 513
>gi|269140202|ref|YP_003296903.1| alanyl-tRNA synthetase [Edwardsiella tarda EIB202]
gi|387868720|ref|YP_005700189.1| alanyl-tRNA synthetase [Edwardsiella tarda FL6-60]
gi|267985863|gb|ACY85692.1| alanyl-tRNA synthetase [Edwardsiella tarda EIB202]
gi|304560033|gb|ADM42697.1| Alanyl-tRNA synthetase [Edwardsiella tarda FL6-60]
Length = 875
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 74/139 (53%), Gaps = 26/139 (18%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N Q VD++ +G E ++L ++ FYAE GGQ+ D G + +G +
Sbjct: 476 NGQAVDALQAGEEGVVVLAQTPFYAESGGQVGDRGELTA-----------------QGCR 518
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
F + + +K + + L ++ +LRVG++++ ID ARR I +H+ATH++
Sbjct: 519 --------FVVEDTQKYGQAIGHLGKVAQGSLRVGERVQASIDGARRERIRQSHSATHLM 570
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR VLG QKGSLV
Sbjct: 571 HAALRSVLGEHVAQKGSLV 589
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+ L G+ A+RLYDTYGFP+DLT + E+GL VD E +E A + + +G
Sbjct: 386 DGDTLDGETAFRLYDTYGFPLDLTADVCRERGLKVDEEGFERAMEAQRRRARESSG 441
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
V L +N Q VD++ +G E ++L ++ FYAE GGQ+ D G ++
Sbjct: 470 VTALFHNGQAVDALQAGEEGVVVLAQTPFYAESGGQVGDRGELT 513
>gi|434396943|ref|YP_007130947.1| alanyl-tRNA synthetase [Stanieria cyanosphaera PCC 7437]
gi|428268040|gb|AFZ33981.1| alanyl-tRNA synthetase [Stanieria cyanosphaera PCC 7437]
Length = 877
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 74/153 (48%), Gaps = 28/153 (18%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
E + + V+ +GTE I+LD++ FYAE GGQI D+G++ G N L+
Sbjct: 469 EALLVEGKSVEKAEAGTEVQIILDQTPFYAESGGQIGDKGYLSGDN----------LLIR 518
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+E + F+ + K+ + TL V D + ID A RR + +NHTA
Sbjct: 519 IEDVQKESGFFVHYG--------KIER------GTLAVNDTVNATIDRACRRRLQANHTA 564
Query: 437 THILNHALRFVLGPEADQKGSLV----YRYHLH 465
TH+L ALR V+ Q GSLV R+ H
Sbjct: 565 THLLQAALRKVVDDSISQAGSLVDFDRLRFDFH 597
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 26/29 (89%)
Query: 19 AWRLYDTYGFPVDLTQLMVEEKGLSVDME 47
A+ LYDTYGFP++LTQ + EE+GL+VD+E
Sbjct: 388 AFTLYDTYGFPLELTQEIAEEQGLTVDVE 416
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
V+ +GTE I+LD++ FYAE GGQI D+G++ G N
Sbjct: 478 VEKAEAGTEVQIILDQTPFYAESGGQIGDKGYLSGDN 514
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 26/34 (76%)
Query: 288 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
V+ +GTE I+LD++ FYAE GGQI D+G++S
Sbjct: 478 VEKAEAGTEVQIILDQTPFYAESGGQIGDKGYLS 511
>gi|224001280|ref|XP_002290312.1| alanine-trna ligase [Thalassiosira pseudonana CCMP1335]
gi|220973734|gb|EED92064.1| alanine-trna ligase [Thalassiosira pseudonana CCMP1335]
Length = 966
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/151 (37%), Positives = 71/151 (47%), Gaps = 33/151 (21%)
Query: 325 FVDSVSSGTEA-GILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
FVDS+S A GI+LDK+NFY E GGQ +D G I + + IE+ N++
Sbjct: 525 FVDSISKENGAVGIVLDKTNFYGESGGQTFDTG-SIKTSSGATIEI-----TNVQ----- 573
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
I+ F L + T+ V D +D RR PI +NHT THILN A
Sbjct: 574 --IYGSFVL----------HIGDVTEGTVTVNDAATCCVDYVRRAPIAANHTMTHILNFA 621
Query: 444 LRFVL---------GPEADQKGSLVYRYHLH 465
LR VL G DQKGSLV L
Sbjct: 622 LRDVLVTRGDADQHGASVDQKGSLVDENKLR 652
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
LG+ KV PG+ A LY + GFPVDLT+LM EE+GL++DME Y DAK K + E
Sbjct: 406 LGDVKVFPGEDAHFLYTSMGFPVDLTELMCEERGLTLDMEGY-DAKMKEEQE 456
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%), Gaps = 1/33 (3%)
Query: 236 FVDSVSSGTEA-GILLDKSNFYAEQGGQIYDEG 267
FVDS+S A GI+LDK+NFY E GGQ +D G
Sbjct: 525 FVDSISKENGAVGIVLDKTNFYGESGGQTFDTG 557
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 60 PESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG 98
P+ + SVEFCGGTHL F + SEE IAKG
Sbjct: 728 PQDAQWNKYSVEFCGGTHLKNTSEAQGFVLLSEEGIAKG 766
>gi|182418956|ref|ZP_02950213.1| alanyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237667051|ref|ZP_04527035.1| alanine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182377239|gb|EDT74807.1| alanyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237655399|gb|EEP52955.1| alanine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 879
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 23/149 (15%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
E + + F DS++ G + ++ D + FYAE GGQI D G + ND + ++ + N
Sbjct: 472 EVLIDGEDFADSLTEGNKGILVTDVTPFYAEMGGQIGDTGLI--YNDSFKAKV-VDTKKN 528
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+ G K+V + LS +++ D + L ID RR I NHTA
Sbjct: 529 MGG--------------------KIVHFVEVLSGEVKINDTVTLEIDNERRERIRKNHTA 568
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ AL VLG Q GSLV L
Sbjct: 569 THLLDRALVKVLGSHVHQAGSLVTDERLR 597
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 38/52 (73%), Gaps = 2/52 (3%)
Query: 5 IAKLGES--KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKK 54
I++L E+ K+L G ++LYDT+GFP++LT+ ++E++G S+D + + + K
Sbjct: 374 ISELKENNKKILSGAEGFKLYDTFGFPMELTKEILEDEGFSLDEDAFHEEMK 425
>gi|238791374|ref|ZP_04635013.1| Alanyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
gi|238729507|gb|EEQ21022.1| Alanyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
Length = 875
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N + VD +++G EA ++L+++ FY E GGQ+ D+G L N
Sbjct: 472 ALFRNGEAVDEINAGEEAVVVLNQTPFYGESGGQVGDKG----------------ELKNA 515
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+ F++++ +K + + L L+ TLRV + +D ARR I NH+A
Sbjct: 516 TAT---------FAVADTQKYGQAIGHLGQLTQGTLRVNHSIDAQVDVARRNRIRLNHSA 566
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR LG QKGSLV +L
Sbjct: 567 THLLHAALRKTLGEHVAQKGSLVNDKYLR 595
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
L G+ A+RLYDTYGFPVDLT + E+ L VD +E A + + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSG 441
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
V+ + TV L N + VD +++G EA ++L+++ FY E GGQ+ D+G + N
Sbjct: 464 VHQQATVTALFRNGEAVDEINAGEEAVVVLNQTPFYGESGGQVGDKGELKN 514
>gi|172036637|ref|YP_001803138.1| alanyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
gi|354554451|ref|ZP_08973755.1| alanyl-tRNA synthetase [Cyanothece sp. ATCC 51472]
gi|205830042|sp|B1WYQ5.1|SYA_CYAA5 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|171698091|gb|ACB51072.1| alanyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
gi|353553260|gb|EHC22652.1| alanyl-tRNA synthetase [Cyanothece sp. ATCC 51472]
Length = 879
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 69/143 (48%), Gaps = 24/143 (16%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
E + + VD+ +G+E I+LD++ FY E GGQI D GF+ G N ++
Sbjct: 471 EAVLIQGKTVDTAEAGSEVQIVLDQTPFYGESGGQIGDRGFLTGEN----------LVIR 520
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+E + IF+ F ++ V D++ ID A RR + +NHTA
Sbjct: 521 VEDVQKESGIFVHFG--------------RVERGSVSVNDQVTATIDRACRRQVQANHTA 566
Query: 437 THILNHALRFVLGPEADQKGSLV 459
TH+L AL+ V+ Q GSLV
Sbjct: 567 THLLQAALKKVVDKSISQAGSLV 589
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 19 AWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHL 78
A+ LYDTYGFP++LTQ + EE L+V++E +E A+ + Q E S+A ET G+
Sbjct: 390 AFTLYDTYGFPLELTQEIAEESNLTVNIEEFE-AEMRQQQE-RSKAAHETIDLTVQGSLD 447
Query: 79 AMAHHV 84
+A H+
Sbjct: 448 KLAEHI 453
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 26/37 (70%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VD+ +G+E I+LD++ FY E GGQI D GF+ G N
Sbjct: 480 VDTAEAGSEVQIVLDQTPFYGESGGQIGDRGFLTGEN 516
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 288 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS-GTEAGILL 339
VD+ +G+E I+LD++ FY E GGQI D GF++ + V V E+GI +
Sbjct: 480 VDTAEAGSEVQIVLDQTPFYGESGGQIGDRGFLTGENLVIRVEDVQKESGIFV 532
>gi|307152653|ref|YP_003888037.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 7822]
gi|306982881|gb|ADN14762.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 7822]
Length = 881
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 71/143 (49%), Gaps = 24/143 (16%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
E + + + VDS +GTE I+L+++ FYAE GGQI D+G++ G N ++
Sbjct: 473 EVVLVDGKTVDSAEAGTEVQIVLNQTPFYAESGGQIGDKGYITGEN----------LVIR 522
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+E + F+ F T+ VGD + ID A RR + ++HTA
Sbjct: 523 VEDVQKESAFFVHFG--------------RVERGTVSVGDTITATIDRACRRRVQAHHTA 568
Query: 437 THILNHALRFVLGPEADQKGSLV 459
TH+L AL+ ++ Q GSLV
Sbjct: 569 THLLQAALKKIVDESVSQAGSLV 591
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGM 66
K + K + G A+ LYDTYGFP++LTQ + EE+GL+VD + + + KK Q S+A
Sbjct: 380 KRRKKKQISGVDAFTLYDTYGFPLELTQEIAEEQGLTVDEDQFNEEMKKQQE--RSKAAH 437
Query: 67 ETSVEFCGGTHLAMAHHV 84
ET G+ +A H+
Sbjct: 438 ETIDLTVQGSLDKLAEHI 455
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
VDS +GTE I+L+++ FYAE GGQI D+G++ G N
Sbjct: 482 VDSAEAGTEVQIVLNQTPFYAESGGQIGDKGYITGEN 518
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 30/42 (71%)
Query: 288 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSV 329
VDS +GTE I+L+++ FYAE GGQI D+G+++ + V V
Sbjct: 482 VDSAEAGTEVQIVLNQTPFYAESGGQIGDKGYITGENLVIRV 523
>gi|428306453|ref|YP_007143278.1| alanyl-tRNA synthetase [Crinalium epipsammum PCC 9333]
gi|428247988|gb|AFZ13768.1| alanyl-tRNA synthetase [Crinalium epipsammum PCC 9333]
Length = 883
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 65/134 (48%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ +GTE I+LDK+ FYAE GGQI D G++ G + +V +E K
Sbjct: 482 VEEAEAGTEVQIVLDKTPFYAESGGQIGDRGYISGD----------AIVVRIEDVKKESD 531
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
F+ F TLRVGD + ID + RR +NH+ATH+L AL+
Sbjct: 532 FFVHFG--------------RIERGTLRVGDAVNAQIDRSCRRRAQANHSATHLLQAALK 577
Query: 446 FVLGPEADQKGSLV 459
++ Q GSLV
Sbjct: 578 KLIDESIGQAGSLV 591
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE-DAKKKAQSEPESQAGMETSVEF 72
+ G+ A+ LYDTYGFP++LTQ + EE+GL+VD +E + +K+ + ++ ++ +V+
Sbjct: 387 ISGESAFTLYDTYGFPLELTQEIAEEQGLTVDQTGFETEMQKQIERAKDAHETIDLTVQ- 445
Query: 73 CGGTHLAMAHHV-GDFCISSEEAIAKGSNIVSYCGSKGTFQSHSGSINDEMVNKYP 127
G+ +A H+ + ++A A V G K ++ +G+ +++K P
Sbjct: 446 --GSLDKLAEHIHATEFLGYKQAAANAKIEVLLVGGKSVEEAEAGTEVQIVLDKTP 499
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 26/39 (66%)
Query: 288 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFV 326
V+ +GTE I+LDK+ FYAE GGQI D G++S V
Sbjct: 482 VEEAEAGTEVQIVLDKTPFYAESGGQIGDRGYISGDAIV 520
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
V+ +GTE I+LDK+ FYAE GGQI D G++ G
Sbjct: 482 VEEAEAGTEVQIVLDKTPFYAESGGQIGDRGYISG 516
>gi|424780153|ref|ZP_18207033.1| Alanyl-tRNA synthetase [Catellicoccus marimammalium M35/04/3]
gi|422843111|gb|EKU27552.1| Alanyl-tRNA synthetase [Catellicoccus marimammalium M35/04/3]
Length = 878
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 101/212 (47%), Gaps = 37/212 (17%)
Query: 265 DEGFMI---GVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG--- 318
D GF + G E R + S T++G+L D F E Y EG
Sbjct: 413 DAGFAVDHEGFEREMEAQRTRARNARSNEQSMKTQSGLLTD---FTEESVFTGYLEGKTT 469
Query: 319 -----FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSS 373
+ +++ V+S+++GT A ++ +++ FYAE GGQI D IGV +++ L
Sbjct: 470 AKPILIVKDEEAVESMNAGT-AKVIFNRTPFYAEMGGQIAD----IGVIEQAD-GLVIGQ 523
Query: 374 LVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSN 433
+++++ + P+ + L L VG + L ID RR+ I +N
Sbjct: 524 VIDVQKAPNGQPLHVI-----------------ELEQPLTVGQEYVLRIDQKRRQLIANN 566
Query: 434 HTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
HTATH+L+ AL+ VLG A+Q GSLV +L
Sbjct: 567 HTATHLLHQALKDVLGEHANQAGSLVTEDYLR 598
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 40/69 (57%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGM 66
K +L G+V ++LYDTYGFPV+LT+ + ++ G +VD E +E + ++ +
Sbjct: 381 KANNETILGGEVIFQLYDTYGFPVELTEEVAQDAGFAVDHEGFEREMEAQRTRARNARSN 440
Query: 67 ETSVEFCGG 75
E S++ G
Sbjct: 441 EQSMKTQSG 449
>gi|110802307|ref|YP_699065.1| alanyl-tRNA synthetase [Clostridium perfringens SM101]
gi|122956614|sp|Q0SS42.1|SYA_CLOPS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|110682808|gb|ABG86178.1| alanine--tRNA ligase [Clostridium perfringens SM101]
Length = 879
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+N++F + G E +L DK+ FYAE GGQ+ D G + E+ + + N+ G
Sbjct: 476 NNEEFKAELKEGEEGFLLTDKTPFYAEMGGQVGDRG---NITSETGMAIVTDCKKNVGG- 531
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
K V + + +L+ G ++KL +D +RR I NHTATH+L
Sbjct: 532 -------------------KFVHYIKVIEGSLKEGQEVKLSVDASRRSNICKNHTATHML 572
Query: 441 NHALRFVLGPEADQKGSLVYRYHLH 465
+ AL+ +LG +Q GS V L
Sbjct: 573 HEALKEILGDHVNQSGSYVDEERLR 597
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETS 69
KVL G A++LYDTYGFP++LTQ ++EEKGL +D+E + + + K Q E A E+S
Sbjct: 383 KVLSGAKAFKLYDTYGFPLELTQEILEEKGLELDIENF-NKEMKEQRERARNARGESS 439
>gi|379727527|ref|YP_005319712.1| alanyl-tRNA synthetase [Melissococcus plutonius DAT561]
gi|376318430|dbj|BAL62217.1| alanyl-tRNA synthetase [Melissococcus plutonius DAT561]
Length = 881
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 95/205 (46%), Gaps = 38/205 (18%)
Query: 271 GVNDEGTVVGLRYNKQFVDSVSSGTEAGILLD---KSNFYAEQGGQIYDEG-----FMSN 322
G +E V R K + S ++ +L D KS F G ++ D + N
Sbjct: 423 GFEEEMKVQRERARKARNNETSMNVQSAVLTDIKVKSTFV---GYEVLDNASELLVLLQN 479
Query: 323 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKY 382
K+ VD+V G A ++ ++ FYAE GGQ+ D G + + EG++
Sbjct: 480 KKMVDTVEKGI-AELIFAETPFYAEMGGQVADHGI----------------IEDGEGNQV 522
Query: 383 ALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRV--GDKLKLHIDTARRRPIMSNHTATHIL 440
A I +Q + + + LH + T + G+ +LH+D R IM NHTATH+L
Sbjct: 523 AHVIDVQKAPNG--------QTLHKVEVTQPMIEGNIYQLHVDKQMRTYIMKNHTATHLL 574
Query: 441 NHALRFVLGPEADQKGSLVYRYHLH 465
+ AL+ VLG A Q GSLV HL
Sbjct: 575 HRALKDVLGEHATQAGSLVDADHLR 599
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGM 66
KL +S L G ++LYDTYGFPV+LT+ + + GL+VD +E+ K +
Sbjct: 382 KLTKSNTLDGKSIFKLYDTYGFPVELTEEIATDAGLTVDHTGFEEEMKVQRERARKARNN 441
Query: 67 ETSV 70
ETS+
Sbjct: 442 ETSM 445
>gi|261820431|ref|YP_003258537.1| alanyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
gi|261604444|gb|ACX86930.1| alanyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
Length = 875
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 79/158 (50%), Gaps = 31/158 (19%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N VD +++G +A ++L+++ FY E GGQ+ D+G +
Sbjct: 476 NGNAVDQIAAGDDAVVILNETPFYGESGGQVGDQGELKNAG------------------- 516
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
+ F++ + +K + + + L+ TLRV D + ++D+ RR I NH+ATH+L
Sbjct: 517 ------VSFAVQDTQKYGQAIGHVGKLTQGTLRVNDSVDANVDSQRRDRIRLNHSATHLL 570
Query: 441 NHALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
+ ALR VLG QKGSLV +L H M+ E+
Sbjct: 571 HAALRQVLGDHVAQKGSLVNDSYLRFDFSHTEAMKPEQ 608
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 37/72 (51%), Gaps = 10/72 (13%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ +RLYDTYGFPVDLT + E+GL VD E +E A + +G
Sbjct: 389 TLDGETVFRLYDTYGFPVDLTADVCRERGLKVDEEGFESAMTAQRQRAREASGFGVDYNS 448
Query: 66 ---METSVEFCG 74
++ + FCG
Sbjct: 449 LIRVDENTPFCG 460
>gi|269101880|ref|ZP_06154577.1| alanyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
102761]
gi|268161778|gb|EEZ40274.1| alanyl-tRNA synthetase [Photobacterium damselae subsp. damselae CIP
102761]
Length = 873
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 70/135 (51%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++++G EA I+LD++ FYAE GGQ D G +
Sbjct: 478 VDALAAGEEAIIVLDQTPFYAESGGQCGDTGALAAAG----------------------- 514
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
+ F++++ +K + TL+ L+VGDKL +D RR I NH+ATH+++ AL
Sbjct: 515 --VAFTVADTQKFGHAIGHKGTLTEGALKVGDKLAATVDHVRRGAISLNHSATHLMHAAL 572
Query: 445 RFVLGPEADQKGSLV 459
R +LG QKGSLV
Sbjct: 573 RKLLGEHVAQKGSLV 587
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+ +L G+ ++LYDTYGFP DLT + E+G ++D E +E A ++ Q + AG
Sbjct: 384 DGSILDGETVFKLYDTYGFPADLTNDVARERGFTIDEEGFEAAMEE-QRQRARDAG 438
>gi|413916474|gb|AFW56406.1| hypothetical protein ZEAMMB73_266824 [Zea mays]
Length = 1002
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/147 (34%), Positives = 75/147 (51%), Gaps = 32/147 (21%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+++ + + + G++L+ ++FYAEQGGQI+D G ++EGS
Sbjct: 559 EYITTATGDGDFGLVLESTSFYAEQGGQIFDTG-------------------SIEGS--- 596
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHT-----LRVGDKLKLHIDTARRRPIMSNHTATH 438
F F+++N++ V LH S T L +GD + +D RR I NHT TH
Sbjct: 597 ---FGTFNVNNVQVFAGYV--LHIGSFTKGSKVLSLGDSVICKVDYNRRTLIAPNHTCTH 651
Query: 439 ILNHALRFVLGPEADQKGSLVYRYHLH 465
+LN ALR VLG DQKGS+V L
Sbjct: 652 MLNFALREVLGDHVDQKGSIVLPEKLR 678
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 41/63 (65%), Gaps = 4/63 (6%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQSEPESQAGMET 68
+L G A+ L+DTYG+P+DLT++M + GL+VD + + E+A++KA++ G
Sbjct: 458 ILSGQDAFILWDTYGYPIDLTEVMAIDYGLTVDKKGFNASMEEARQKARNARNKSGGNSI 517
Query: 69 SVE 71
+++
Sbjct: 518 AMD 520
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSG 116
++P+S+ + S E CGGTH+ F + SEE IAKG I + T
Sbjct: 751 ADPDSKEWLSISTELCGGTHITNTRDAKAFALLSEEGIAKGVRRITAVTAGCATQAMELA 810
Query: 117 SINDEMVNKYPSL 129
S D +NK L
Sbjct: 811 SSIDSDINKASQL 823
>gi|293392770|ref|ZP_06637088.1| alanine-tRNA ligase [Serratia odorifera DSM 4582]
gi|291424629|gb|EFE97840.1| alanine-tRNA ligase [Serratia odorifera DSM 4582]
Length = 875
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/142 (35%), Positives = 67/142 (47%), Gaps = 24/142 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q VD + +G EA ++LD + FY E GGQ+ D+G + E V + KY
Sbjct: 478 QPVDEIHAGEEAVVVLDATPFYGESGGQVGDKGILKSAAAE---------FVVGDTQKYG 528
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
I Q L+ L+VGD + ID RR I NH+ATH+L+ A
Sbjct: 529 QAIGHQGKLAQ---------------GVLKVGDSVDALIDQVRRNRIRLNHSATHLLHAA 573
Query: 444 LRFVLGPEADQKGSLVYRYHLH 465
LR VLG QKGSLV +L
Sbjct: 574 LRQVLGEHVAQKGSLVNDKYLR 595
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+GL VD +E A + +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERGLKVDEAGFEAAMEAQRRRARE 438
Query: 63 QAG----------METSVEFCGGTH 77
+G ++ + EFCG H
Sbjct: 439 SSGFGADYNSLIRVDGASEFCGYDH 463
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 29/48 (60%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
+ + L + Q VD + +G EA ++LD + FY E GGQ+ D+G + +
Sbjct: 467 QAKITALFRDGQPVDEIHAGEEAVVVLDATPFYGESGGQVGDKGILKS 514
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
Q VD + +G EA ++LD + FY E GGQ+ D+G +
Sbjct: 478 QPVDEIHAGEEAVVVLDATPFYGESGGQVGDKGIL 512
>gi|358390987|gb|EHK40392.1| hypothetical protein TRIATDRAFT_153342 [Trichoderma atroviride IMI
206040]
Length = 954
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 69/132 (52%), Gaps = 25/132 (18%)
Query: 329 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPI-F 387
+ T G+LLDK+NFYAE GGQI D G ++ ++D +E + + G Y L +
Sbjct: 516 IPPNTAIGLLLDKTNFYAESGGQIADTGRIV-IDD--VVEFKVMDVQDFGG--YVLHSGY 570
Query: 388 LQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFV 447
+++ L D++ D RR PI +NH+ THILNH+LR V
Sbjct: 571 IEYG-------------------ELNSDDEVICEYDELRRSPIRNNHSGTHILNHSLREV 611
Query: 448 LGPEADQKGSLV 459
LG + +QKGSLV
Sbjct: 612 LGEDVNQKGSLV 623
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVE 71
K L GDV WRLYDT+GFPVDLT+LM EE+GL +D A++KA+ E+ ++ SV+
Sbjct: 407 KKLDGDVVWRLYDTFGFPVDLTKLMAEERGLDIDEAEVAVAREKAR---EASKAVKDSVQ 463
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 22/31 (70%)
Query: 240 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMI 270
+ T G+LLDK+NFYAE GGQI D G ++
Sbjct: 516 IPPNTAIGLLLDKTNFYAESGGQIADTGRIV 546
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 291 VSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+ T G+LLDK+NFYAE GGQI D G
Sbjct: 516 IPPNTAIGLLLDKTNFYAESGGQIADTG 543
>gi|317493956|ref|ZP_07952373.1| alanyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316918283|gb|EFV39625.1| alanyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 875
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 73/142 (51%), Gaps = 24/142 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q VD +++G E ++L+++ FYAE GGQ+ D+G ++ S V + KY
Sbjct: 478 QAVDVLNAGEEGVVVLNETPFYAESGGQVGDKG---------ELTAQGVSFVVTDTQKYG 528
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
I Q ++ +++VGD ++ ID ARR I NH+ATH+L+ A
Sbjct: 529 QAIGHQGKVAQ---------------GSVKVGDSVEATIDEARRSRIRLNHSATHLLHAA 573
Query: 444 LRFVLGPEADQKGSLVYRYHLH 465
LR VLG QKGSLV +L
Sbjct: 574 LRQVLGDHVSQKGSLVSDRNLR 595
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
L G+ A+RLYDTYGFP+DLT + E+ L VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPLDLTADVCRERNLKVDEIGFERAMEEQRRRARESSG 441
>gi|402819549|ref|ZP_10869117.1| alaS protein [alpha proteobacterium IMCC14465]
gi|402511696|gb|EJW21957.1| alaS protein [alpha proteobacterium IMCC14465]
Length = 899
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 71/142 (50%), Gaps = 26/142 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
+ S+G EA I+++++ FYAE GGQ D+G L+ A+
Sbjct: 479 AERASAGQEASIIVNQTPFYAESGGQAGDKG-------------------TLKSENAAM- 518
Query: 386 IFLQFSLSNLKKK--KKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
S++N KK V + S L VGD + L ID +RR I SNH+ATH+L+ A
Sbjct: 519 ----MSVANTLKKLGDMHVHIGEVQSGELAVGDIVHLAIDDSRRSKIRSNHSATHLLHEA 574
Query: 444 LRFVLGPEADQKGSLVYRYHLH 465
LR VLG QKGSLV +L
Sbjct: 575 LRRVLGDHVTQKGSLVEENYLR 596
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 40/51 (78%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
KVLPG++A++LYDTYGFP+DLTQ + E+GL VD + +E A +K ++E +
Sbjct: 381 KVLPGNIAFKLYDTYGFPLDLTQDALRERGLRVDEQGFETAMEKQRAEARA 431
>gi|335043025|ref|ZP_08536052.1| alanyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
gi|333789639|gb|EGL55521.1| alanyl-tRNA synthetase [Methylophaga aminisulfidivorans MP]
Length = 867
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 69/149 (46%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
+ N + VDS+S G E I+LDK+ FYAE GGQ+ D G + N
Sbjct: 462 AIIVNGEHVDSISEGQEGLIVLDKTPFYAESGGQVGDHGEINADN--------------- 506
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
F++S+ +K+ + + H +VG ++ ID R NH+A
Sbjct: 507 ----------ASFTVSDTRKQSQAFTHIGRCEHGRFQVGQRVTAQIDENNRLATALNHSA 556
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR VLG QKGSLV L
Sbjct: 557 THLLHAALRKVLGEHVMQKGSLVNPQRLR 585
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%), Gaps = 11/82 (13%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA----KKKAQS 58
Q I +G+ K +PG+ + LYDTYGFP+DLT + E+GL++D+ +E A + +A+S
Sbjct: 370 QAIEDMGD-KEIPGETVFLLYDTYGFPIDLTADIARERGLTIDIAGFERAMEAQRNRARS 428
Query: 59 EPESQAGM------ETSVEFCG 74
+ G+ ++S EFCG
Sbjct: 429 ASQFSGGLSDQITIDSSTEFCG 450
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 60/130 (46%), Gaps = 15/130 (11%)
Query: 190 VFLAVAEFLFLVSSCGFIGSDTGLG-DLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGI 248
VFL + F + I + GL D++ + +R R QF S G I
Sbjct: 385 VFLLYDTYGFPIDLTADIARERGLTIDIAGFERAMEAQRNRARSASQF----SGGLSDQI 440
Query: 249 LLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYA 308
+D S + G+ + +D T++ + N + VDS+S G E I+LDK+ FYA
Sbjct: 441 TIDSSTEFC---------GYDLTQHD-STILAIIVNGEHVDSISEGQEGLIVLDKTPFYA 490
Query: 309 EQGGQIYDEG 318
E GGQ+ D G
Sbjct: 491 ESGGQVGDHG 500
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 41/85 (48%), Gaps = 9/85 (10%)
Query: 202 SSCGFIGSDTGLGDLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGG 261
SS F G D T+H + L N + VDS+S G E I+LDK+ FYAE GG
Sbjct: 444 SSTEFCGYDL-------TQHDSTI--LAIIVNGEHVDSISEGQEGLIVLDKTPFYAESGG 494
Query: 262 QIYDEGFMIGVNDEGTVVGLRYNKQ 286
Q+ D G + N TV R Q
Sbjct: 495 QVGDHGEINADNASFTVSDTRKQSQ 519
>gi|428309118|ref|YP_007120095.1| alanyl-tRNA synthetase [Microcoleus sp. PCC 7113]
gi|428250730|gb|AFZ16689.1| alanyl-tRNA synthetase [Microcoleus sp. PCC 7113]
Length = 885
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 68/143 (47%), Gaps = 24/143 (16%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
E + + + V+S +G + ++LD++ FYAE GGQI D G++ G + LV
Sbjct: 477 EALLVDGKSVESAEAGNKVQVILDRTPFYAESGGQIGDRGYLSGD----------TVLVR 526
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+E K F+ F TL VG L ID + RR +NHTA
Sbjct: 527 VEDVKKESDFFVHFG--------------SIERGTLEVGATLTAQIDRSCRRRAQANHTA 572
Query: 437 THILNHALRFVLGPEADQKGSLV 459
TH+L AL+ ++ P Q GSLV
Sbjct: 573 THLLQAALKQIVDPGISQAGSLV 595
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFC 73
+ G A+ LYDTYGFP++LTQ + EE+GLSVD+ +E + +AQ E ++ ET
Sbjct: 391 ISGKDAFTLYDTYGFPLELTQEIAEEQGLSVDIAGFE-KEMEAQRE-RARDAHETIDLTV 448
Query: 74 GGTHLAMAHHV 84
G+ +A H+
Sbjct: 449 QGSLDKLAEHI 459
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 29/44 (65%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
V L + + V+S +G + ++LD++ FYAE GGQI D G++S
Sbjct: 476 VEALLVDGKSVESAEAGNKVQVILDRTPFYAESGGQIGDRGYLS 519
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
V+S +G + ++LD++ FYAE GGQI D G++ G
Sbjct: 486 VESAEAGNKVQVILDRTPFYAESGGQIGDRGYLSG 520
>gi|403059639|ref|YP_006647856.1| alanyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402806965|gb|AFR04603.1| alanyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 875
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 73/145 (50%), Gaps = 26/145 (17%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N VD + +G EA ++L+++ FY E GGQ+ D+G +
Sbjct: 476 NGNAVDQIVAGDEAVVILNETPFYGESGGQVGDQGELKNAG------------------- 516
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
+ F++ + +K + + + L+ TLRV D + ++D+ RR I NH+ATH+L
Sbjct: 517 ------VSFAVQDTQKYGQAIGHVGKLTQGTLRVNDNVDANVDSQRRDRIRLNHSATHLL 570
Query: 441 NHALRFVLGPEADQKGSLVYRYHLH 465
+ ALR VLG QKGSLV +L
Sbjct: 571 HAALRQVLGDHVAQKGSLVNDSYLR 595
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+GL VD E +E A + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERGLKVDEEGFEAAMTAQRQRAREASGFGVDYNS 448
Query: 66 ---METSVEFCG 74
++ + FCG
Sbjct: 449 LIRVDENTPFCG 460
>gi|256003587|ref|ZP_05428576.1| alanyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|385778113|ref|YP_005687278.1| alanyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
gi|419723834|ref|ZP_14250938.1| alanyl-tRNA synthetase [Clostridium thermocellum AD2]
gi|419724817|ref|ZP_14251875.1| alanyl-tRNA synthetase [Clostridium thermocellum YS]
gi|255992378|gb|EEU02471.1| alanyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|316939793|gb|ADU73827.1| alanyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
gi|380771856|gb|EIC05718.1| alanyl-tRNA synthetase [Clostridium thermocellum YS]
gi|380780069|gb|EIC09763.1| alanyl-tRNA synthetase [Clostridium thermocellum AD2]
Length = 880
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 67/141 (47%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ Q VD G ++LD++ FYAE GGQ+ D+G L+ E
Sbjct: 474 IIKEDQVVDEAQKGDSVTVILDRTPFYAESGGQVGDKG-----------------LIEAE 516
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G++ + L +N K + + TLR G ++K ID RR I NHT TH
Sbjct: 517 GARVKV---LDCKKTN---DGKYLHIGEIEEGTLRNGMEVKATIDKKRRMAIARNHTTTH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ ALR VLG +Q GSLV
Sbjct: 571 LLHKALRNVLGSHVNQAGSLV 591
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 2 LQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQS 58
++ K GE KV+ GDV + L+ TYGFPVDLT+ + EE GL VD E + + K+ Q+
Sbjct: 374 IEETRKKGE-KVISGDVVFELHGTYGFPVDLTREIAEENGLGVDEEGFREKMKEHQN 429
>gi|281416686|ref|ZP_06247706.1| alanyl-tRNA synthetase [Clostridium thermocellum JW20]
gi|281408088|gb|EFB38346.1| alanyl-tRNA synthetase [Clostridium thermocellum JW20]
Length = 880
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 67/141 (47%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ Q VD G ++LD++ FYAE GGQ+ D+G L+ E
Sbjct: 474 IIKEDQVVDEAQKGESVTVILDRTPFYAESGGQVGDKG-----------------LIEAE 516
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G++ + L +N K + + TLR G ++K ID RR I NHT TH
Sbjct: 517 GARVKV---LDCKKTN---DGKYLHIGEIEEGTLRNGMEVKATIDKKRRMAIARNHTTTH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ ALR VLG +Q GSLV
Sbjct: 571 LLHKALRNVLGSHVNQAGSLV 591
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 2 LQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQS 58
++ K GE KV+ GDV + L+ TYGFPVDLT+ + EE GL VD E + + K+ Q+
Sbjct: 374 IEETRKKGE-KVISGDVVFELHGTYGFPVDLTREIAEENGLGVDEEGFREKMKEHQN 429
>gi|89092119|ref|ZP_01165074.1| alanyl-tRNA synthetase [Neptuniibacter caesariensis]
gi|89083854|gb|EAR63071.1| alanyl-tRNA synthetase [Oceanospirillum sp. MED92]
Length = 854
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 36/139 (25%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++ +G ++LD++ FYAE GGQ+ D G +N + +
Sbjct: 472 VDTLQTGETGLVVLDETPFYAESGGQVGDTG---ALNASASV------------------ 510
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH------TLRVGDKLKLHIDTARRRPIMSNHTATHI 439
F+++N K+ K + L H +L VGDK+ +D RR+ I NH+ATH+
Sbjct: 511 ----FAVTNCTKEGK-----NNLHHGSVEQGSLSVGDKVAPQVDAVRRKAIALNHSATHL 561
Query: 440 LNHALRFVLGPEADQKGSL 458
L+ ALR VLG QKGSL
Sbjct: 562 LHEALRVVLGEHVQQKGSL 580
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
V+PG+ ++LYDTYGFP DLT + E L++D E +E + +AQ E AG
Sbjct: 380 VIPGETVFKLYDTYGFPHDLTADVAREHELTIDEEGFE-REMEAQRERARAAG 431
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 7/86 (8%)
Query: 267 GFMIGVNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFV 326
G+ + +D TVV L + VD++ +G ++LD++ FYAE GGQ+ D G ++ V
Sbjct: 451 GYELLESDASTVVALFKEGEAVDTLQTGETGLVVLDETPFYAESGGQVGDTGALNASASV 510
Query: 327 DSVSSGTEAGILLDKSNFY---AEQG 349
+V++ T+ G K+N + EQG
Sbjct: 511 FAVTNCTKEG----KNNLHHGSVEQG 532
>gi|423100586|ref|ZP_17088293.1| alanine--tRNA ligase [Listeria innocua ATCC 33091]
gi|370792810|gb|EHN60653.1| alanine--tRNA ligase [Listeria innocua ATCC 33091]
Length = 879
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 25/162 (15%)
Query: 300 LLDKSNFYAEQGGQIYDE--GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGF 357
L DKS F + E + + VD V+SG+ A ++ ++ FYAE GGQ+ D+G
Sbjct: 453 LTDKSEFVGYNTTEHVSEILYLIQDDTLVDEVASGSVAQVIFKETPFYAESGGQVADKGT 512
Query: 358 MIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDK 417
+ ES+ G Y + + NL + + L+ GD
Sbjct: 513 I-----ESET-----------GVAYVEDVQKAPNKQNLHR-------ISVKEGVLKTGDT 549
Query: 418 LKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+KL +D +RR + NHTATH+L+ AL+ LG +Q GSLV
Sbjct: 550 VKLAVDKVKRRETIKNHTATHLLHRALKDTLGEHVNQAGSLV 591
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 75/171 (43%), Gaps = 32/171 (18%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD-------MEVYE 50
+L+TI AK + + G ++LYDT+GFPV+LT+ E+ GL VD M+
Sbjct: 371 ILETILKNAKETNEQTIKGADIFKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKEQR 430
Query: 51 DAKKKAQSEPESQ-------AGMETSVEFCG---GTHLA-MAHHVGDFCISSEEAIAKGS 99
D + A+++ +S A + EF G H++ + + + D + E A +
Sbjct: 431 DRARSARADVKSMQVQGELLANLTDKSEFVGYNTTEHVSEILYLIQDDTLVDEVASGSVA 490
Query: 100 NIV-----------SYCGSKGTFQSHSGSINDEMVNKYPSLYRLFRTVHKQ 139
++ KGT +S +G E V K P+ L R K+
Sbjct: 491 QVIFKETPFYAESGGQVADKGTIESETGVAYVEDVQKAPNKQNLHRISVKE 541
>gi|238784094|ref|ZP_04628108.1| Alanyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
gi|238714940|gb|EEQ06938.1| Alanyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
Length = 875
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N Q VD + +G EA ++L+++ FY E GGQ+ D G +
Sbjct: 472 ALFRNGQAVDEIHAGEEAVVVLNQTPFYGESGGQVGDTGEL------------------- 512
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
K A F+ +++ +K + + L L+H TLRV + +D RR I NH+A
Sbjct: 513 ---KNATATFV---VADTQKYGQAIGHLGKLTHGTLRVNHSIDAQVDATRRDRIRLNHSA 566
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR LG QKGSLV +L
Sbjct: 567 THLLHAALRKTLGEHVAQKGSLVNDKYLR 595
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
L G+ A+RLYDTYGFPVDLT + E+ L VD +E A + + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSG 441
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 32/51 (62%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
V+ + TV L N Q VD + +G EA ++L+++ FY E GGQ+ D G + N
Sbjct: 464 VHQQATVTALFRNGQAVDEIHAGEEAVVVLNQTPFYGESGGQVGDTGELKN 514
>gi|125975678|ref|YP_001039588.1| alanyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
gi|205830037|sp|A3DKB6.1|SYA_CLOTH RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|125715903|gb|ABN54395.1| alanyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
Length = 880
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 67/141 (47%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ Q VD G ++LD++ FYAE GGQ+ D+G L+ E
Sbjct: 474 IIKEDQVVDEAQKGDSVTVILDRTPFYAESGGQVGDKG-----------------LIEAE 516
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G++ + L +N K + + TLR G ++K ID RR I NHT TH
Sbjct: 517 GARVKV---LDCKKTN---DGKYLHIGEIEEGTLRNGMEVKATIDKKRRMAIARNHTTTH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ ALR VLG +Q GSLV
Sbjct: 571 LLHKALRNVLGSHVNQAGSLV 591
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%), Gaps = 1/57 (1%)
Query: 2 LQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQS 58
++ K GE KV+ GDV + L+ TYGFPVDLT+ + EE GL VD E + + K+ Q+
Sbjct: 374 IEETRKKGE-KVISGDVVFELHGTYGFPVDLTREIAEENGLGVDEEGFREKMKEHQN 429
>gi|374313930|ref|YP_005060359.1| alanyl-tRNA synthetase [Serratia symbiotica str. 'Cinara cedri']
gi|363988156|gb|AEW44347.1| alanyl-tRNA synthetase [Serratia symbiotica str. 'Cinara cedri']
Length = 877
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 70/143 (48%), Gaps = 26/143 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
VD +++G A ++LD++ FY E GGQ+ D G + VN
Sbjct: 478 HLVDKINTGEVAIVVLDRTPFYGEAGGQVGDTGVLKTVN--------------------- 516
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F +++ +K K + L LS TL++ D + ID RR I NH+ATH+L+
Sbjct: 517 ----ACFVVNDTQKYNKAIYHLGVLSKGTLKLKDHVNAQIDVERRNHIRLNHSATHLLHA 572
Query: 443 ALRFVLGPEADQKGSLVYRYHLH 465
ALR +LG QKGSLV +L
Sbjct: 573 ALRQILGNHVKQKGSLVNDKYLR 595
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETS 69
+ + L G++A+RLYDT+GFP+DLT + E+GL VD +E A + + S
Sbjct: 386 QDETLDGEIAFRLYDTFGFPIDLTTEICRERGLKVDKVRFERAMDSQRRRARESSNF--S 443
Query: 70 VEFCGGTHLAMA 81
V++ H+ ++
Sbjct: 444 VDYNTKIHMDIS 455
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 251 DKSNFYAEQGGQIY---DEGFMIGVNDE--GTVVGLRYNKQFVDSVSSGTEAGILLDKSN 305
+ SNF + +I+ GF V++E V+ L + VD +++G A ++LD++
Sbjct: 438 ESSNFSVDYNTKIHMDISSGFSGYVDEEHRAIVIALLLDGHLVDKINTGEVAIVVLDRTP 497
Query: 306 FYAEQGGQIYDEGFM 320
FY E GGQ+ D G +
Sbjct: 498 FYGEAGGQVGDTGVL 512
>gi|88813103|ref|ZP_01128344.1| alanyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
gi|88789587|gb|EAR20713.1| alanyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
Length = 869
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 74/146 (50%), Gaps = 29/146 (19%)
Query: 314 IYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSS 373
+Y EG N + +G + +LLD++ FYAE GGQ+ D G+++ E + E+W
Sbjct: 466 LYAEGRRRNH-----LEAGEQGMVLLDRTPFYAESGGQVGDRGWLLA--SELEFEVW--D 516
Query: 374 LVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSN 433
V G+ F + ++ +L G+++ +D RR+ + N
Sbjct: 517 TVKYRGA---------FGHVGVVRQGRLA-----------AGERVSTRVDAERRQATVLN 556
Query: 434 HTATHILNHALRFVLGPEADQKGSLV 459
H+ATH+L+ ALR VLG A QKGSLV
Sbjct: 557 HSATHLLHAALRRVLGEHAQQKGSLV 582
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
ES+ +PG ++LYDTYGFPVDLT + E+GL +DM +E
Sbjct: 379 ESQTIPGATIFKLYDTYGFPVDLTGDIARERGLGLDMPGFE 419
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
+ D+G V L + + + +G + +LLD++ FYAE GGQ+ D G++
Sbjct: 457 LQDQGLVTALYAEGRRRNHLEAGEQGMVLLDRTPFYAESGGQVGDRGWL 505
>gi|416090379|ref|ZP_11588079.1| LOW QUALITY PROTEIN: alanyl-tRNA synthetase [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|348009193|gb|EGY49368.1| LOW QUALITY PROTEIN: alanyl-tRNA synthetase [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
Length = 514
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 32/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++SSG A ++LD + FYAE GGQI D G LEG+ +
Sbjct: 119 VDTISSGQSAVVILDNTPFYAESGGQIGDIG-------------------RLEGNGF--- 156
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F + + +K ++ + L+ +L VG + +D RR+ I NH+ATH+L+ AL
Sbjct: 157 ---NFDVKDTQKYGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQRISLNHSATHLLHAAL 213
Query: 445 RFVLGPEADQKGSLV------YRYHLHENIMECE 472
R VLG QKGSLV + + HE I + +
Sbjct: 214 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQ 247
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGME 67
KVL G+VA++LYDTYGFP+DLT + E+G+++D +E ++ +++ SQ GM+
Sbjct: 27 KVLSGEVAFKLYDTYGFPLDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGMD 84
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
V L ++ + VD++SSG A ++LD + FYAE GGQI D G + F
Sbjct: 109 VTALFHDGKPVDTISSGQSAVVILDNTPFYAESGGQIGDIGRLEGNGF 156
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 219 TKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
T+ K ++ + VD++SSG A ++LD + FYAE GGQI D G + G
Sbjct: 101 TESETLAKVTALFHDGKPVDTISSGQSAVVILDNTPFYAESGGQIGDIGRLEG 153
>gi|224105089|ref|XP_002313683.1| predicted protein [Populus trichocarpa]
gi|313471500|sp|B9HQZ6.1|SYAP_POPTR RecName: Full=Probable alanine--tRNA ligase, chloroplastic;
AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|222850091|gb|EEE87638.1| predicted protein [Populus trichocarpa]
Length = 994
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 85/164 (51%), Gaps = 23/164 (14%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
E + N + V VS G+E +LL+K+ FYAE GGQI D GF+ D+S+ +++V
Sbjct: 572 ESLLLNGKSVIQVSEGSEVEVLLNKTPFYAESGGQIGDHGFLYVTQDQSKQ----TAVVE 627
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
++ +Q SL ++ K ++ L VG +++ +D R+ +HTA
Sbjct: 628 IKD--------VQKSLGSVFVHKGTIR-----EGVLEVGREVEAAVDAKLRQRAKVHHTA 674
Query: 437 THILNHALRFVLGPEADQKGSLV------YRYHLHENIMECEEE 474
TH+L AL+ V+G E Q GSLV + ++ H + + E E
Sbjct: 675 THLLQSALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLHDSELE 718
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 28/43 (65%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDE 275
N + V VS G+E +LL+K+ FYAE GGQI D GF+ D+
Sbjct: 577 NGKSVIQVSEGSEVEVLLNKTPFYAESGGQIGDHGFLYVTQDQ 619
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 31/44 (70%), Gaps = 3/44 (6%)
Query: 10 ESKVLP---GDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
+S+ LP G + LYDT+GFPV++T + EE+G+ +DM+ +E
Sbjct: 480 KSETLPCLSGKDVFLLYDTFGFPVEITTEVAEEQGVKIDMDGFE 523
>gi|75906451|ref|YP_320747.1| alanyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
gi|123745317|sp|Q3MGN4.1|SYA_ANAVT RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|75700176|gb|ABA19852.1| alanyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
Length = 880
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 63/133 (47%), Gaps = 24/133 (18%)
Query: 327 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPI 386
+ +GTE I+LDK+ FYAE GGQI D G++ G +V +E K
Sbjct: 483 EEAEAGTEVQIVLDKTPFYAESGGQIGDRGYISG----------DGIVVQVEDVKKESDF 532
Query: 387 FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRF 446
F+ F TLRVGD + ID A RR +NHTATH+L AL+
Sbjct: 533 FVHFG--------------RIERGTLRVGDSVTAQIDRAGRRRAQANHTATHLLQAALKT 578
Query: 447 VLGPEADQKGSLV 459
++ Q GSLV
Sbjct: 579 IVDGGISQAGSLV 591
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 3/84 (3%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
++Q + K G++ ++ G+ A+ LYDTYGFP++LTQ + EE L+VD + + + + + Q E
Sbjct: 375 IIQQVKKQGQT-IISGESAFTLYDTYGFPLELTQEIAEENNLTVDEDDF-NVEMQKQVE- 431
Query: 61 ESQAGMETSVEFCGGTHLAMAHHV 84
++A ET G+ +A H+
Sbjct: 432 RAKAAHETIDLTVQGSLDKLAEHI 455
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 289 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSV 329
+ +GTE I+LDK+ FYAE GGQI D G++S V V
Sbjct: 483 EEAEAGTEVQIVLDKTPFYAESGGQIGDRGYISGDGIVVQV 523
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 238 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVD 289
+ +GTE I+LDK+ FYAE GGQI D G++ G +G VV + K+ D
Sbjct: 483 EEAEAGTEVQIVLDKTPFYAESGGQIGDRGYISG---DGIVVQVEDVKKESD 531
>gi|337269280|ref|YP_004613335.1| alanyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
gi|336029590|gb|AEH89241.1| alanyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
Length = 888
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 75/154 (48%), Gaps = 27/154 (17%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+ + + + VDS G ++++++ FY E GGQ+ D G + G
Sbjct: 470 QALVKDGKTVDSAGKGDAVAVVVNQTPFYGESGGQMGDTGIISG---------------- 513
Query: 377 LEGSKYALPIFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNH 434
EG +S+ +KK V L S T++VG ++L +D ARR + +NH
Sbjct: 514 -EG--------FSIEISDTQKKADGLFVHLGTVASGTVKVGAAVELKVDHARRSRLRANH 564
Query: 435 TATHILNHALRFVLGPEADQKGSLVYRYHLHENI 468
+ATH+++ ALR VLG QKGSLV L +I
Sbjct: 565 SATHLIHEALREVLGTHVAQKGSLVAPERLRFDI 598
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 36/47 (76%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
+L G+ A++LYDTYGFP+DLTQ + ++ +SVD+ + +A ++ ++E
Sbjct: 382 MLDGETAFKLYDTYGFPLDLTQDALRQRSISVDLAGFTNAMEQQKAE 428
>gi|299822850|ref|ZP_07054736.1| alanine--tRNA ligase [Listeria grayi DSM 20601]
gi|299816379|gb|EFI83617.1| alanine--tRNA ligase [Listeria grayi DSM 20601]
Length = 876
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/141 (31%), Positives = 69/141 (48%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ N VD V +G EA ++ ++ FYAE GGQI D G ++ +
Sbjct: 474 LIQNDTLVDEVKAGEEAQVIFRETPFYAESGGQIADHG----------------TIQSTS 517
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G Y + + NL + + L+ G+++ L +DT +R+ + NHTATH
Sbjct: 518 GLAYVKDVQKAPNKQNLHR-------IFVEEGVLKSGEEVDLRVDTYKRKSTVKNHTATH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ AL+ VLG +Q GSLV
Sbjct: 571 LLHRALKNVLGEHVNQAGSLV 591
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 1 MLQTI---AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
+L+TI AK + G ++LYDTYGFPV+LT+ E+ GL+VD E +E A+ K Q
Sbjct: 371 ILETILKEAKASGEATISGSAIFKLYDTYGFPVELTEEYAEDHGLAVDHEGFE-AEMKQQ 429
Query: 58 SEPESQA 64
E +A
Sbjct: 430 RERAREA 436
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 25/41 (60%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 318
+V L N VD V +G EA ++ ++ FYAE GGQI D G
Sbjct: 471 IVYLIQNDTLVDEVKAGEEAQVIFRETPFYAESGGQIADHG 511
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 267
N VD V +G EA ++ ++ FYAE GGQI D G
Sbjct: 477 NDTLVDEVKAGEEAQVIFRETPFYAESGGQIADHG 511
>gi|284007755|emb|CBA73582.1| alanyl-tRNA synthetase [Arsenophonus nasoniae]
Length = 899
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 26/141 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ ++ G E I+LDK++FYAE GGQ+ D G L N G
Sbjct: 503 VNVLNQGEEGIIILDKTSFYAESGGQVGDSGI----------------LSNSHG------ 540
Query: 386 IFLQFSLSNLKKKKKLVKLL-HTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
QF++S+ +K + + L ++ ++ V + ++ ID RR I NH+ATH+L+ AL
Sbjct: 541 ---QFAVSDTQKYAQAIGHLGKVITGSITVNNSVEAKIDIERRNAIRLNHSATHLLHAAL 597
Query: 445 RFVLGPEADQKGSLVYRYHLH 465
R VLG QKGSLV +L
Sbjct: 598 RDVLGEHVSQKGSLVNEKYLR 618
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 35/50 (70%)
Query: 273 NDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
N + TV+ + ++ + V+ ++ G E I+LDK++FYAE GGQ+ D G +SN
Sbjct: 488 NQQATVIAIFHHGKSVNVLNQGEEGIIILDKTSFYAESGGQVGDSGILSN 537
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMET 68
+ L G++A+RLYDTYGFP DLT + E+ + VD + A ++ + +G T
Sbjct: 409 QGDTLAGEIAFRLYDTYGFPFDLTADVCRERNIKVDEAGFNAAMEQQRYRARESSGFAT 467
>gi|242085328|ref|XP_002443089.1| hypothetical protein SORBIDRAFT_08g008230 [Sorghum bicolor]
gi|241943782|gb|EES16927.1| hypothetical protein SORBIDRAFT_08g008230 [Sorghum bicolor]
Length = 1006
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 74/145 (51%), Gaps = 28/145 (19%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+++ + + + G++L+ ++FYAEQGGQI+D G ++EGS
Sbjct: 563 EYITTATGDEDFGLVLESTSFYAEQGGQIFDTG-------------------SIEGS--- 600
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTL---SHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
F F+++N++ V + + S L +GD + +D RR I NHT TH+L
Sbjct: 601 ---FGTFNVNNVQVFAGYVLHIGSFAKGSKVLSLGDSVICKVDYNRRTLIAPNHTCTHML 657
Query: 441 NHALRFVLGPEADQKGSLVYRYHLH 465
N ALR VLG DQKGS+V L
Sbjct: 658 NFALREVLGDHVDQKGSIVLPEKLR 682
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQSEPESQAGMET 68
VL G A+ L+DTYG+P+DLT++M + GL+VD E + E+A++KA++ G
Sbjct: 462 VLSGQDAFVLWDTYGYPIDLTEVMAIDYGLTVDKEGFNASMEEARQKARNARNKSGGKSI 521
Query: 69 SVEFCGGTHL 78
+++ HL
Sbjct: 522 ALDANATAHL 531
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG 98
++P+S+ + S E CGGTH+ F + SEE IAKG
Sbjct: 755 ADPDSKEWLSISTELCGGTHITNTRDAKAFALLSEEGIAKG 795
>gi|186681072|ref|YP_001864268.1| alanyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
gi|205830164|sp|B2J876.1|SYA_NOSP7 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|186463524|gb|ACC79325.1| alanyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
Length = 880
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 327 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPI 386
+ +GT+ I+LDK+ FYAE GGQI D G++ G +V +E K
Sbjct: 483 EEAEAGTQVQIVLDKTPFYAESGGQIGDRGYISG----------DGIVVRVEDVKKESDF 532
Query: 387 FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRF 446
F+ F TLRVGD++ ID A RR +NHTATH+L AL+
Sbjct: 533 FVHFG--------------RIERGTLRVGDRVTAQIDPACRRRAQANHTATHLLQAALKK 578
Query: 447 VLGPEADQKGSLV 459
++ Q GSLV
Sbjct: 579 IVDDGISQAGSLV 591
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
++Q + + G +++ G+ A+ LYDTYGFP++LTQ + EE L+VD E +E
Sbjct: 375 IIQEVKQQGSTQI-SGESAFTLYDTYGFPLELTQEVAEENNLTVDAEGFE 423
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 24/33 (72%)
Query: 289 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
+ +GT+ I+LDK+ FYAE GGQI D G++S
Sbjct: 483 EEAEAGTQVQIVLDKTPFYAESGGQIGDRGYIS 515
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 238 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVD 289
+ +GT+ I+LDK+ FYAE GGQI D G++ G +G VV + K+ D
Sbjct: 483 EEAEAGTQVQIVLDKTPFYAESGGQIGDRGYISG---DGIVVRVEDVKKESD 531
>gi|238786914|ref|ZP_04630715.1| Alanyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
gi|238725282|gb|EEQ16921.1| Alanyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
Length = 875
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N + VD + G EA ++L+++ FY E GGQ+ D+G L N
Sbjct: 472 ALFRNGEAVDEIHEGEEAVVVLNQTPFYGESGGQVGDKG----------------ELKNA 515
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+ F++++ +K + + L L+H TLRV + +D RR I NH+A
Sbjct: 516 TAT---------FAVADTQKYGQAIGHLGQLTHGTLRVNHSVDAQVDVVRRNRIRLNHSA 566
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR LG QKGSLV +L
Sbjct: 567 THLLHAALRKTLGEHVAQKGSLVNDKYLR 595
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
L G+ A+RLYDTYGFP+DLT + E+ L VD +E A + + +G
Sbjct: 389 TLDGETAFRLYDTYGFPIDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSG 441
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 32/51 (62%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
V+ + TV L N + VD + G EA ++L+++ FY E GGQ+ D+G + N
Sbjct: 464 VHQQATVTALFRNGEAVDEIHEGEEAVVVLNQTPFYGESGGQVGDKGELKN 514
>gi|87199300|ref|YP_496557.1| alanyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
gi|123489936|sp|Q2G8V0.1|SYA_NOVAD RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|87134981|gb|ABD25723.1| alanyl-tRNA synthetase [Novosphingobium aromaticivorans DSM 12444]
Length = 881
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 76/153 (49%), Gaps = 22/153 (14%)
Query: 307 YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQ 366
Y G+ + + + VDS +G + ++++++ FY E GGQ D G + G +
Sbjct: 460 YTATTGEAQVVALVKDGKEVDSAMAGDDVAVIVNQTPFYGESGGQTGDAGTITGGD---- 515
Query: 367 IELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTAR 426
LV L S A P L L V+ S +++VGD ++L ID AR
Sbjct: 516 ------GLV-LAVSDTAKP------LGRLHAHNAKVQ-----SGSVKVGDVVRLDIDVAR 557
Query: 427 RRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
R I +NH+ATH+L+ ALR LG QKGSLV
Sbjct: 558 RDAIRANHSATHLLHAALRHRLGAHVTQKGSLV 590
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
+ A LGE LPGD A++LYDTYGFP DLT+ + +G++VD E ++
Sbjct: 372 EATATLGEGDKLPGDTAFKLYDTYGFPYDLTEDALRARGIAVDREGFD 419
>gi|440754375|ref|ZP_20933577.1| alanyl-tRNA synthetase [Microcystis aeruginosa TAIHU98]
gi|440174581|gb|ELP53950.1| alanyl-tRNA synthetase [Microcystis aeruginosa TAIHU98]
Length = 874
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+S ++GTE I+LDK+ FYAE GGQI D+G++ G N L+ +E +
Sbjct: 475 VESAAAGTEVQIVLDKTPFYAESGGQIGDKGYLTGDN----------LLIRVEDVQKESG 524
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
IF+ F + ++ +V GD + ID + RR +NHTATH+L AL+
Sbjct: 525 IFIHFG----RVERGIVT----------TGDTINAQIDRSCRRRAQANHTATHLLQSALK 570
Query: 446 FVLGPEADQKGSLV 459
++ Q GSLV
Sbjct: 571 KLVDGGISQAGSLV 584
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+L++I + +S++ G A+ LYDTYGFP++LTQ + EE+GLSVD +E KK Q
Sbjct: 368 LLESILEKEKSQI-SGVDAFTLYDTYGFPLELTQEIAEEQGLSVDTAGFEQEMKKQQQ-- 424
Query: 61 ESQAGMETSVEFCGGTHLAMAHHV 84
S+A ET G+ +A H+
Sbjct: 425 RSKAAHETIDLTVQGSLDKLAEHI 448
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
V+S ++GTE I+LDK+ FYAE GGQI D+G++ G N
Sbjct: 475 VESAAAGTEVQIVLDKTPFYAESGGQIGDKGYLTGDN 511
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS-GTE 334
TV + + V+S ++GTE I+LDK+ FYAE GGQI D+G+++ + V E
Sbjct: 463 ATVTAVLVAGKTVESAAAGTEVQIVLDKTPFYAESGGQIGDKGYLTGDNLLIRVEDVQKE 522
Query: 335 AGILL 339
+GI +
Sbjct: 523 SGIFI 527
>gi|395790915|ref|ZP_10470374.1| alanyl-tRNA synthetase [Bartonella alsatica IBS 382]
gi|395409211|gb|EJF75810.1| alanyl-tRNA synthetase [Bartonella alsatica IBS 382]
Length = 895
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 68/138 (49%), Gaps = 27/138 (19%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+ V +SSG +A ++L+++ FY E GGQI D G + G N
Sbjct: 485 KIVHHISSGQKAILILNQTPFYGESGGQIGDSGIISGEN--------------------- 523
Query: 384 LPIFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
F + + +KK + + S + D ++L +D RR+ I +NH+ATH+L+
Sbjct: 524 ----FVFEVYDTQKKANGVFIHIGEVKSGQAKTSDCVELTVDVVRRKKIRANHSATHLLH 579
Query: 442 HALRFVLGPEADQKGSLV 459
ALR LGP QKGSLV
Sbjct: 580 EALRQTLGPHVTQKGSLV 597
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 36/48 (75%)
Query: 16 GDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQ 63
G+VA++LYDTYGFP+DLT+ ++ +G+SVD++ + A ++ + E +
Sbjct: 393 GEVAFKLYDTYGFPLDLTEDVLRRRGISVDVDTFYKAMERQKEEARAN 440
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 34/52 (65%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFV 326
+G + L Y+ + V +SSG +A ++L+++ FY E GGQI D G +S + FV
Sbjct: 474 KGILTALVYDGKIVHHISSGQKAILILNQTPFYGESGGQIGDSGIISGENFV 525
Score = 39.7 bits (91), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 232 YNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
Y+ + V +SSG +A ++L+++ FY E GGQI D G + G N
Sbjct: 482 YDGKIVHHISSGQKAILILNQTPFYGESGGQIGDSGIISGEN 523
>gi|326317055|ref|YP_004234727.1| alanyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
gi|323373891|gb|ADX46160.1| alanyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC 19860]
Length = 876
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 71/140 (50%), Gaps = 28/140 (20%)
Query: 325 FVDSVSS-GTEAG----ILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEG 379
+VD S+ EAG ++LD + FYAE GGQ+ D+G +++ G
Sbjct: 475 YVDGTSAQALEAGQNGVVVLDNTPFYAESGGQVGDQG-----------------VIHAGG 517
Query: 380 SKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHI 439
+++A+ L+ +L S TLRVGD ++ +D A R M NH+ THI
Sbjct: 518 ARFAVDDTLKIRADVYGHHGRLE------SGTLRVGDAVQAEVDAALRAATMRNHSVTHI 571
Query: 440 LNHALRFVLGPEADQKGSLV 459
++ ALR VLG QKGSLV
Sbjct: 572 MHKALREVLGSHVQQKGSLV 591
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 49/68 (72%), Gaps = 2/68 (2%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA--KKKAQSEPESQAGM 66
G +KVLPGDVA++L+DTYGFP+DLT + E+G++VD + + A ++KAQ+ + M
Sbjct: 387 GGAKVLPGDVAFKLHDTYGFPLDLTNDVCRERGVTVDEDGFNAAMDRQKAQARAAGKFKM 446
Query: 67 ETSVEFCG 74
+ ++E+ G
Sbjct: 447 DKALEYAG 454
>gi|410447801|ref|ZP_11301893.1| alanine--tRNA ligase [SAR86 cluster bacterium SAR86E]
gi|409979381|gb|EKO36143.1| alanine--tRNA ligase [SAR86 cluster bacterium SAR86E]
Length = 856
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 73/142 (51%), Gaps = 24/142 (16%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G ++ VDSVS E + LD++ FYAE GGQ+ D+G + QI L
Sbjct: 458 GLWNDDLRVDSVSDDKEYFLALDQTPFYAESGGQVGDQGTFSCSSGSGQI---------L 508
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
+ K + SL +K + VKL GDKLKL ++ +R SNH+AT
Sbjct: 509 DCIKQG-----KISLHTIKIDEGAVKL----------GDKLKLAVEPDKRAAAASNHSAT 553
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H+++ AL+ VLG +QKGSLV
Sbjct: 554 HLMHAALKHVLGSHVEQKGSLV 575
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD 45
+SKV+PGDV ++L+DT+GFP DLT + E+ L +D
Sbjct: 373 DSKVIPGDVVFKLHDTFGFPFDLTADIAREQDLKLD 408
>gi|390441780|ref|ZP_10229812.1| Alanyl-tRNA synthetase [Microcystis sp. T1-4]
gi|389834916|emb|CCI33938.1| Alanyl-tRNA synthetase [Microcystis sp. T1-4]
Length = 874
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+S ++GTE I+LDK+ FYAE GGQI D+G++ G N L+ +E +
Sbjct: 475 VESAAAGTEVQIVLDKTPFYAESGGQIGDKGYLTGDN----------LLIRVEDVQKESG 524
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
IF+ F + ++ +V GD + ID + RR +NHTATH+L AL+
Sbjct: 525 IFIHFG----RIERGIVT----------TGDTINAQIDRSCRRRAQANHTATHLLQSALK 570
Query: 446 FVLGPEADQKGSLV 459
++ Q GSLV
Sbjct: 571 KLVDGGISQAGSLV 584
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+L++I + +S++ G A+ LYDTYGFP++LTQ + EE+GLSVD +E KK Q
Sbjct: 368 LLESILEKEKSQI-SGVDAFTLYDTYGFPLELTQEIAEEQGLSVDTAGFEQEMKKQQQ-- 424
Query: 61 ESQAGMETSVEFCGGTHLAMAHHV 84
S+A ET G+ +A H+
Sbjct: 425 RSKAAHETIDLTVQGSLDKLAEHI 448
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
V+S ++GTE I+LDK+ FYAE GGQI D+G++ G N
Sbjct: 475 VESAAAGTEVQIVLDKTPFYAESGGQIGDKGYLTGDN 511
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS-GTE 334
TV + + V+S ++GTE I+LDK+ FYAE GGQI D+G+++ + V E
Sbjct: 463 ATVTAVLVAGKTVESAAAGTEVQIVLDKTPFYAESGGQIGDKGYLTGDNLLIRVEDVQKE 522
Query: 335 AGILL 339
+GI +
Sbjct: 523 SGIFI 527
>gi|313471806|sp|Q5AQL1.2|SYA_EMENI RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|259486703|tpe|CBF84773.1| TPA: alanyl-tRNA synthetase, putative (AFU_orthologue;
AFUA_8G03880) [Aspergillus nidulans FGSC A4]
Length = 961
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 32/144 (22%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
F S+ Q +D + GI+LD++NFYAEQGGQ D G ++ ++ ++++E+ ++
Sbjct: 515 FHSSTQNLDD---SEQIGIILDRTNFYAEQGGQENDTGRIV-IDGQAELEV-------VD 563
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHT 435
+YA + LHT + +V D + D RR PI +NHT
Sbjct: 564 VQQYAGYV------------------LHTGYMKYGSFKVDDTVICEYDELRRWPIRNNHT 605
Query: 436 ATHILNHALRFVLGPEADQKGSLV 459
THILN ALR VLG +QKGSLV
Sbjct: 606 GTHILNFALRGVLGDGIEQKGSLV 629
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
Q G+ K+ DV WRLYDT+GFPVDLT++M EE+GL +D +E+A+ KA+ +
Sbjct: 405 QQAKTAGDHKLHGADV-WRLYDTFGFPVDLTRIMAEERGLEIDDRQFEEARHKAKEASKG 463
Query: 63 QAGMET 68
Q T
Sbjct: 464 QKKTTT 469
>gi|28210757|ref|NP_781701.1| alanyl-tRNA synthetase [Clostridium tetani E88]
gi|41018208|sp|Q896F2.1|SYA_CLOTE RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|28203195|gb|AAO35638.1| alanyl-tRNA synthetase [Clostridium tetani E88]
Length = 879
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 74/148 (50%), Gaps = 23/148 (15%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
+ ++ V+ + G + I++DK+ FY+E+GGQI D G + G N + +I+ N+
Sbjct: 473 AIIKGEELVEELKQGDKGIIIVDKTPFYSEKGGQIGDTGILAGKNVKVKIQ---DCRNNI 529
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
G K++ + L ++++ D + L +D RR I NH+AT
Sbjct: 530 SG--------------------KILHFVEILEGSIKLQDTVNLTVDRLRRDAIRKNHSAT 569
Query: 438 HILNHALRFVLGPEADQKGSLVYRYHLH 465
H+L+ AL+ ++G +Q GS V + L
Sbjct: 570 HLLHEALKKIVGAHIEQAGSFVDEHRLR 597
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 58/118 (49%), Gaps = 26/118 (22%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD-------MEVYEDAKKKAQSEPE--- 61
KVLPGD A++LYDTYGFP++LT+ ++EEK + +D ME + + A+ E
Sbjct: 383 KVLPGDKAFKLYDTYGFPIELTKEILEEKSIDIDEGGFTKEMEAQKQRARAAREETNYMG 442
Query: 62 ------SQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYC--GSKGTF 111
++ +E EF G + L++ + AI KG +V G KG
Sbjct: 443 SEDTIINKLPIELQTEFLGYSELSVEAKII--------AIIKGEELVEELKQGDKGII 492
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 234 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYN 284
++ V+ + G + I++DK+ FY+E+GGQI D G + G N + + R N
Sbjct: 478 EELVEELKQGDKGIIIVDKTPFYSEKGGQIGDTGILAGKNVKVKIQDCRNN 528
>gi|425451390|ref|ZP_18831211.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 7941]
gi|389767326|emb|CCI07234.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 7941]
Length = 874
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+S ++GTE I+LDK+ FYAE GGQI D+G++ G N L+ +E +
Sbjct: 475 VESAAAGTEVQIVLDKTPFYAESGGQIGDKGYLTGDN----------LLIRVEDVQKESG 524
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
IF+ F + ++ +V GD + ID + RR +NHTATH+L AL+
Sbjct: 525 IFIHFG----RIERGIVT----------TGDTINAQIDRSCRRRAQANHTATHLLQSALK 570
Query: 446 FVLGPEADQKGSLV 459
++ Q GSLV
Sbjct: 571 KLVDGGISQAGSLV 584
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+L++I + +S++ G A+ LYDTYGFP++LTQ + EE+GLSVD +E KK Q
Sbjct: 368 LLESILEKEKSQI-SGVDAFTLYDTYGFPLELTQEIAEEQGLSVDTAGFEQEMKKQQQ-- 424
Query: 61 ESQAGMETSVEFCGGTHLAMAHHV 84
S+A ET G+ +A H+
Sbjct: 425 RSKAAHETIDLTVQGSLDKLAEHI 448
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
V+S ++GTE I+LDK+ FYAE GGQI D+G++ G N
Sbjct: 475 VESAAAGTEVQIVLDKTPFYAESGGQIGDKGYLTGDN 511
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS-GTE 334
TV + + V+S ++GTE I+LDK+ FYAE GGQI D+G+++ + V E
Sbjct: 463 ATVTAVLVAGKTVESAAAGTEVQIVLDKTPFYAESGGQIGDKGYLTGDNLLIRVEDVQKE 522
Query: 335 AGILL 339
+GI +
Sbjct: 523 SGIFI 527
>gi|332706959|ref|ZP_08427019.1| alanyl-tRNA synthetase [Moorea producens 3L]
gi|332354224|gb|EGJ33704.1| alanyl-tRNA synthetase [Moorea producens 3L]
Length = 876
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 100/230 (43%), Gaps = 38/230 (16%)
Query: 242 SGTEAGILLDKSNFYAEQGGQIYDE--------GFMIGVNDEGTVVGLRYNKQFVDSVSS 293
SGT+A L D F E +I +E GF + + + R + +D
Sbjct: 384 SGTDAFTLYDTYGFPVELTEEIAEEQGLTVDLDGFEVEMERQRERA--RVAHETIDLTVQ 441
Query: 294 GT--EAGILLDKSNF--YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQG 349
G+ + G + + F Y E E + + + V+S +G++ ++LD++ FYAE G
Sbjct: 442 GSLDQLGEHIHSTAFLGYTEPQSMAKVEALLVDGKSVESAGAGSKVQVILDQTPFYAESG 501
Query: 350 GQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLS 409
GQI D G++ G S LV +E + F+ F
Sbjct: 502 GQIGDRGYLSGD----------SLLVRIEDVQKESDFFVHFGTVE--------------R 537
Query: 410 HTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
L VG + ID A RR + +NH+ATH+L AL+ ++ P Q GSLV
Sbjct: 538 GNLAVGTTVTAQIDRACRRRVQANHSATHLLQAALKRIVDPSISQAGSLV 587
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 32/41 (78%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
+ K + G A+ LYDTYGFPV+LT+ + EE+GL+VD++ +E
Sbjct: 379 KPKQISGTDAFTLYDTYGFPVELTEEIAEEQGLTVDLDGFE 419
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 26/35 (74%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
V+S +G++ ++LD++ FYAE GGQI D G++ G
Sbjct: 478 VESAGAGSKVQVILDQTPFYAESGGQIGDRGYLSG 512
>gi|75858922|ref|XP_868801.1| hypothetical protein AN9419.2 [Aspergillus nidulans FGSC A4]
gi|40747680|gb|EAA66836.1| hypothetical protein AN9419.2 [Aspergillus nidulans FGSC A4]
Length = 981
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 76/144 (52%), Gaps = 32/144 (22%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
F S+ Q +D + GI+LD++NFYAEQGGQ D G ++ ++ ++++E+ ++
Sbjct: 535 FHSSTQNLDD---SEQIGIILDRTNFYAEQGGQENDTGRIV-IDGQAELEV-------VD 583
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHT 435
+YA + LHT + +V D + D RR PI +NHT
Sbjct: 584 VQQYAGYV------------------LHTGYMKYGSFKVDDTVICEYDELRRWPIRNNHT 625
Query: 436 ATHILNHALRFVLGPEADQKGSLV 459
THILN ALR VLG +QKGSLV
Sbjct: 626 GTHILNFALRGVLGDGIEQKGSLV 649
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
Q G+ K+ DV WRLYDT+GFPVDLT++M EE+GL +D +E+A+ KA+ +
Sbjct: 425 QQAKTAGDHKLHGADV-WRLYDTFGFPVDLTRIMAEERGLEIDDRQFEEARHKAKEASKG 483
Query: 63 QAGMET 68
Q T
Sbjct: 484 QKKTTT 489
>gi|425458889|ref|ZP_18838375.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9808]
gi|389823608|emb|CCI28041.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9808]
Length = 874
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 70/134 (52%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+S ++GTE I+LD++ FYAE GGQI D+G++ G N L+ +E +
Sbjct: 475 VESAAAGTEVQIVLDQTPFYAESGGQIGDKGYLTGDN----------LLIRVEDVQKESG 524
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
IF+ F + ++ +V GD + ID A RR +NHTATH+L AL+
Sbjct: 525 IFIHFG----RIERGIVT----------TGDTINAQIDRACRRRAQANHTATHLLQSALK 570
Query: 446 FVLGPEADQKGSLV 459
++ Q GSLV
Sbjct: 571 KLVDGGISQAGSLV 584
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+L++I + +S++ G A+ LYDTYGFP++LTQ + EE+GLSVD +E KK Q
Sbjct: 368 LLESILEKEKSQI-SGVDAFTLYDTYGFPLELTQEIAEEQGLSVDTAGFEQEMKKQQQ-- 424
Query: 61 ESQAGMETSVEFCGGTHLAMAHHV 84
S+A ET G+ +A H+
Sbjct: 425 RSKAAHETIDLTVQGSLDKLAEHI 448
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
V+S ++GTE I+LD++ FYAE GGQI D+G++ G N
Sbjct: 475 VESAAAGTEVQIVLDQTPFYAESGGQIGDKGYLTGDN 511
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS-GTE 334
TV + + V+S ++GTE I+LD++ FYAE GGQI D+G+++ + V E
Sbjct: 463 ATVTAVLVAGKTVESAAAGTEVQIVLDQTPFYAESGGQIGDKGYLTGDNLLIRVEDVQKE 522
Query: 335 AGILL 339
+GI +
Sbjct: 523 SGIFI 527
>gi|392382932|ref|YP_005032129.1| alanyl-tRNA synthetase [Azospirillum brasilense Sp245]
gi|356877897|emb|CCC98753.1| alanyl-tRNA synthetase [Azospirillum brasilense Sp245]
Length = 889
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 80/145 (55%), Gaps = 26/145 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ + G E ++++++ FY E GGQ+ D G + FS+ EG++ A+
Sbjct: 479 VEQATVGDEVLVIVNQTPFYGESGGQVGDAGVI------------FSA----EGTEVAV- 521
Query: 386 IFLQFSLSNLKKKKKLV-KLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
S+ +KK V + T++ TL+VGD ++L +DT RR I +NH+ATH+L+ A
Sbjct: 522 -------SDTQKKLGAVWAHVGTVTKGTLKVGDVVELRVDTERRSAIRANHSATHLLHEA 574
Query: 444 LRFVLGPEADQKGSLVYRYHLHENI 468
LR LG QKGSLV + L +I
Sbjct: 575 LRRRLGEHVTQKGSLVAQERLRFDI 599
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 7/65 (10%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA----KKKAQSEP 60
+ +LGE + LPGDVA++LYDTYGFP+DLTQ ++ +G VD ++ A ++KA+
Sbjct: 374 VGRLGEGQPLPGDVAFKLYDTYGFPLDLTQDVLRTQGRPVDESGFKAAMDEQRRKAR--- 430
Query: 61 ESQAG 65
ES AG
Sbjct: 431 ESWAG 435
>gi|319638074|ref|ZP_07992838.1| alanyl-tRNA synthetase [Neisseria mucosa C102]
gi|317400719|gb|EFV81376.1| alanyl-tRNA synthetase [Neisseria mucosa C102]
Length = 964
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 23/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD ++ G E +++D + FYAE GGQ+ D G++ + ++ + K
Sbjct: 567 VDELNEGDEGAVVIDFTPFYAESGGQVGDVGYIFAGENRFEVR---------DTQKIKAA 617
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
+F QF + S L+VGD + +D R M NH+ATH+++ ALR
Sbjct: 618 VFGQFGVQT--------------SGRLKVGDSVTAKVDDEIRNANMRNHSATHLMHKALR 663
Query: 446 FVLGPEADQKGSLV 459
VLG +QKGSLV
Sbjct: 664 DVLGEHVEQKGSLV 677
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
V+ G+ ++LYDTYGFP DLT M E G+ +D +E
Sbjct: 477 VIGGEHIFKLYDTYGFPYDLTADMARELGIELDEAGFE 514
>gi|313471498|sp|B9FSH5.1|SYAP_ORYSJ RecName: Full=Probable alanine--tRNA ligase, chloroplastic;
AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS
gi|222635304|gb|EEE65436.1| hypothetical protein OsJ_20798 [Oryza sativa Japonica Group]
Length = 932
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 22/162 (13%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+G + N V+ VS G++ I LD++ FYAE GGQ+ D GF+ +E + +++
Sbjct: 512 KGLLVNGNSVNVVSEGSDVEIFLDRTPFYAESGGQVGDNGFLYVYGEEDAKQ---KAVIE 568
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+ +Q SL N+ K +K ++ VG ++ +D R+ ++HTA
Sbjct: 569 IND--------VQKSLGNIFVHKGTIK-----QGSVEVGKEIDAAVDAKLRQGAKAHHTA 615
Query: 437 THILNHALRFVLGPEADQKGSLV------YRYHLHENIMECE 472
TH+L AL+ ++G E Q GSLV + ++ H + E E
Sbjct: 616 THLLQSALKSIIGSETSQAGSLVAFDRLRFDFNFHRPLSEEE 657
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N V+ VS G++ I LD++ FYAE GGQ+ D GF+
Sbjct: 517 NGNSVNVVSEGSDVEIFLDRTPFYAESGGQVGDNGFL 553
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQS 58
G L G + LYDTYGFPV++T + E+G+ VDM+ + E+ +K++Q+
Sbjct: 422 GGKPCLSGKDVFLLYDTYGFPVEITAEISGERGVIVDMKGFDMEMENQRKQSQA 475
>gi|415768598|ref|ZP_11483837.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|444345601|ref|ZP_21153612.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
gi|348657809|gb|EGY75390.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-2]
gi|443542662|gb|ELT52970.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
Length = 847
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 32/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++SSG A ++LD + FYAE GGQI D G LEG+ +
Sbjct: 452 VDTISSGQSAVVILDNTPFYAESGGQIGDIG-------------------RLEGNGF--- 489
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F + + +K ++ + L+ +L VG + +D RR+ I NH+ATH+L+ AL
Sbjct: 490 ---NFDVKDTQKYGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQRISLNHSATHLLHAAL 546
Query: 445 RFVLGPEADQKGSLV------YRYHLHENIMECE 472
R VLG QKGSLV + + HE I + +
Sbjct: 547 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQ 580
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGME 67
KVL G+VA++LYDTYGFP+DLT + E+G+++D +E ++ +++ SQ GM+
Sbjct: 360 KVLSGEVAFKLYDTYGFPLDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGMD 417
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
V L ++ + VD++SSG A ++LD + FYAE GGQI D G + F
Sbjct: 442 VTALFHDGKPVDTISSGQSAVVILDNTPFYAESGGQIGDIGRLEGNGF 489
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VD++SSG A ++LD + FYAE GGQI D G + G
Sbjct: 452 VDTISSGQSAVVILDNTPFYAESGGQIGDIGRLEG 486
>gi|313471497|sp|B8B4H5.1|SYAP_ORYSI RecName: Full=Probable alanine--tRNA ligase, chloroplastic;
AltName: Full=Alanyl-tRNA synthetase; Short=AlaRS;
Flags: Precursor
gi|218197887|gb|EEC80314.1| hypothetical protein OsI_22356 [Oryza sativa Indica Group]
Length = 996
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 82/162 (50%), Gaps = 22/162 (13%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+G + N V+ VS G++ I LD++ FYAE GGQ+ D GF+ +E + +++
Sbjct: 576 KGLLVNGNSVNVVSEGSDVEIFLDRTPFYAESGGQVGDNGFLYVYGEEDAKQ---KAVIE 632
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+ +Q SL N+ K +K ++ VG ++ +D R+ ++HTA
Sbjct: 633 IND--------VQKSLGNIFVHKGTIK-----QGSVEVGKEIDAAVDAKLRQGAKAHHTA 679
Query: 437 THILNHALRFVLGPEADQKGSLV------YRYHLHENIMECE 472
TH+L AL+ ++G E Q GSLV + ++ H + E E
Sbjct: 680 THLLQSALKSIIGSETSQAGSLVAFDRLRFDFNFHRPLSEEE 721
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 4/54 (7%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQS 58
G L G + LYDTYGFPV++T + E+G+ VDM+ + E+ +K++Q+
Sbjct: 486 GGKPCLSGKDVFLLYDTYGFPVEITAEIAGERGVIVDMKGFDMEMENQRKQSQA 539
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N V+ VS G++ I LD++ FYAE GGQ+ D GF+
Sbjct: 581 NGNSVNVVSEGSDVEIFLDRTPFYAESGGQVGDNGFL 617
>gi|383188656|ref|YP_005198784.1| alanine--tRNA ligase [Rahnella aquatilis CIP 78.65 = ATCC 33071]
gi|371586914|gb|AEX50644.1| alanine--tRNA ligase [Rahnella aquatilis CIP 78.65 = ATCC 33071]
Length = 875
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 77/156 (49%), Gaps = 31/156 (19%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q V+ + +G A ++LD + FY E GGQ+ D+G + K A
Sbjct: 478 QPVNEIEAGVNAIVVLDDTPFYGESGGQVGDKGIL----------------------KTA 515
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
+ FS+S+ +K K + L+ L +GD ++ +D ARR I NH+ATH+L+
Sbjct: 516 AGV---FSVSDTQKYGKAIGHQGALNAGKLSIGDSVEAEVDVARRDRIRLNHSATHLLHA 572
Query: 443 ALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
ALR VLG QKGSLV +L H M+ EE
Sbjct: 573 ALRQVLGKHVAQKGSLVNDSYLRFDFSHFEAMKPEE 608
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 70/157 (44%), Gaps = 19/157 (12%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA----KKKAQ------SEPESQ 63
L G++A+RLYDT+GFP+DLT + E+ L VD +E A +++A+ ++ S
Sbjct: 390 LDGEIAFRLYDTFGFPLDLTADVCRERNLKVDEVGFEKAMDVQRRRARESSGFSADYNSM 449
Query: 64 AGMETSVEFCGGTHLAMAHHVGDFCISSEEA--IAKGSNIVSYCGSKGTFQSHSGSINDE 121
++ +F G HL +V + + I G N + + G + D+
Sbjct: 450 VRVDGVTQFSGYEHLQRHSNVVALFVEGQPVNEIEAGVNAIVVLDDTPFYGESGGQVGDK 509
Query: 122 MVNKYPSLYRLFRTVHKQKY-----VQDALNVSCLSF 153
+ K + +F QKY Q ALN LS
Sbjct: 510 GILKTAA--GVFSVSDTQKYGKAIGHQGALNAGKLSI 544
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 277 TVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAG 336
VV L Q V+ + +G A ++LD + FY E GGQ+ D+G + V SVS + G
Sbjct: 469 NVVALFVEGQPVNEIEAGVNAIVVLDDTPFYGESGGQVGDKGILKTAAGVFSVSDTQKYG 528
>gi|416076720|ref|ZP_11585646.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|444338379|ref|ZP_21152222.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|348004467|gb|EGY44970.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|443545148|gb|ELT54997.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
Length = 847
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 32/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++SSG A ++LD + FYAE GGQI D G LEG+ +
Sbjct: 452 VDTISSGQSAVVILDNTPFYAESGGQIGDIG-------------------RLEGNGF--- 489
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F + + +K ++ + L+ +L VG + +D RR+ I NH+ATH+L+ AL
Sbjct: 490 ---NFDVKDTQKYGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQRISLNHSATHLLHAAL 546
Query: 445 RFVLGPEADQKGSLV------YRYHLHENIMECE 472
R VLG QKGSLV + + HE I + +
Sbjct: 547 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQ 580
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGME 67
KVL G+VA++LYDTYGFP+DLT + E+G+++D +E ++ +++ SQ GM+
Sbjct: 360 KVLSGEVAFKLYDTYGFPLDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGMD 417
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
V L ++ + VD++SSG A ++LD + FYAE GGQI D G + F
Sbjct: 442 VTALFHDGKPVDTISSGQSAVVILDNTPFYAESGGQIGDIGRLEGNGF 489
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VD++SSG A ++LD + FYAE GGQI D G + G
Sbjct: 452 VDTISSGQSAVVILDNTPFYAESGGQIGDIGRLEG 486
>gi|365835405|ref|ZP_09376825.1| alanine--tRNA ligase [Hafnia alvei ATCC 51873]
gi|364566167|gb|EHM43866.1| alanine--tRNA ligase [Hafnia alvei ATCC 51873]
Length = 875
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 73/142 (51%), Gaps = 24/142 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q VD +++G E ++L+++ FYAE GGQ+ D+G ++ S V + KY
Sbjct: 478 QAVDVLNAGEEGVVVLNETPFYAESGGQVGDKG---------ELTAQGVSFVVTDTQKYG 528
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
I Q ++ +++VGD ++ ID ARR I NH+ATH+L+ A
Sbjct: 529 QAIGHQGKVAQ---------------GSVKVGDSVEAIIDEARRSRIRLNHSATHLLHAA 573
Query: 444 LRFVLGPEADQKGSLVYRYHLH 465
LR VLG QKGSLV +L
Sbjct: 574 LRQVLGDHVSQKGSLVSDRNLR 595
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
L G+ A+RLYDTYGFP+DLT + E+ L VD +E A ++ + +G
Sbjct: 389 TLDGETAFRLYDTYGFPLDLTADVCRERNLKVDEIGFERAMEEQRRRARESSG 441
>gi|238758257|ref|ZP_04619436.1| Alanyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
gi|238703587|gb|EEP96125.1| Alanyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
Length = 847
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 74/149 (49%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N + VD + +G EA ++L+++ FY E GGQ+ D+G EL ++ V
Sbjct: 444 ALFRNGEAVDEIHAGEEAVVVLNQTPFYGESGGQVGDKG-----------ELKNATAV-- 490
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
F++ + +K + + L L+ TLRV + +D ARR I NH+A
Sbjct: 491 ------------FTVVDTQKYGQAIGHLGQLTQGTLRVNHSVDAQVDVARRNRIRLNHSA 538
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR LG QKGSLV +L
Sbjct: 539 THLLHAALRKTLGEHVAQKGSLVNDKYLR 567
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 14/143 (9%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+ L VD +E A + + +G
Sbjct: 361 TLDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSGFGADYNS 420
Query: 66 ---METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGSIND 120
++++ +F G H+ V + E + I G V + G + D
Sbjct: 421 LIRVDSASQFSGYDHVHQQATVTALFRNGEAVDEIHAGEEAVVVLNQTPFYGESGGQVGD 480
Query: 121 EMVNKYPSLYRLFRTVHKQKYVQ 143
+ + + +F V QKY Q
Sbjct: 481 K--GELKNATAVFTVVDTQKYGQ 501
Score = 45.1 bits (105), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSV 329
V+ + TV L N + VD + +G EA ++L+++ FY E GGQ+ D+G + N V +V
Sbjct: 436 VHQQATVTALFRNGEAVDEIHAGEEAVVVLNQTPFYGESGGQVGDKGELKNATAVFTV 493
>gi|416103971|ref|ZP_11589639.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|348007653|gb|EGY47953.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
Length = 822
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 32/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++SSG A ++LD + FYAE GGQI D G LEG+ +
Sbjct: 427 VDTISSGQSAVVILDNTPFYAESGGQIGDIG-------------------RLEGNGF--- 464
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F + + +K ++ + L+ +L VG + +D RR+ I NH+ATH+L+ AL
Sbjct: 465 ---NFDVKDTQKYGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQRISLNHSATHLLHAAL 521
Query: 445 RFVLGPEADQKGSLV------YRYHLHENIMECE 472
R VLG QKGSLV + + HE I + +
Sbjct: 522 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQ 555
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGME 67
KVL G+VA++LYDTYGFP+DLT + E+G+++D +E ++ +++ SQ GM+
Sbjct: 335 KVLSGEVAFKLYDTYGFPLDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGMD 392
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
V L ++ + VD++SSG A ++LD + FYAE GGQI D G + F
Sbjct: 417 VTALFHDGKPVDTISSGQSAVVILDNTPFYAESGGQIGDIGRLEGNGF 464
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 219 TKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
T+ K ++ + VD++SSG A ++LD + FYAE GGQI D G + G
Sbjct: 409 TESETLAKVTALFHDGKPVDTISSGQSAVVILDNTPFYAESGGQIGDIGRLEG 461
>gi|428202632|ref|YP_007081221.1| alanyl-tRNA synthetase [Pleurocapsa sp. PCC 7327]
gi|427980064|gb|AFY77664.1| alanyl-tRNA synthetase [Pleurocapsa sp. PCC 7327]
Length = 877
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 24/143 (16%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
E + + + V++ +G + I+LDK+ FYAE GGQI D G++ G N LV
Sbjct: 469 EAVLVDGKTVEAAEAGEQVQIVLDKTPFYAESGGQIGDRGYLTGEN----------LLVR 518
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+E + F+ F +++GD + ID A RR +NHTA
Sbjct: 519 IEDVQKESDFFVHFG--------------RVERGIIQIGDTVTAQIDRACRRRAQANHTA 564
Query: 437 THILNHALRFVLGPEADQKGSLV 459
TH+L AL+ ++ Q GSLV
Sbjct: 565 THLLQAALKKIVDDSISQAGSLV 587
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE-DAKKKAQSEPESQAGMET 68
E + + G+ A+ LYDT+GFP++LTQ + E L+VD+E +E + +K+ Q ES ++
Sbjct: 379 EKQQISGEDAFTLYDTHGFPLELTQEIAAENSLTVDVEGFEREMEKQRQRGRESHKTIDL 438
Query: 69 SVEFCGGTHLAMAHHV 84
+V+ G+ +A H+
Sbjct: 439 TVQ---GSLDKLAEHI 451
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
V++ +G + I+LDK+ FYAE GGQI D G++ G N
Sbjct: 478 VEAAEAGEQVQIVLDKTPFYAESGGQIGDRGYLTGEN 514
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 27/39 (69%)
Query: 288 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFV 326
V++ +G + I+LDK+ FYAE GGQI D G+++ + +
Sbjct: 478 VEAAEAGEQVQIVLDKTPFYAESGGQIGDRGYLTGENLL 516
>gi|323490022|ref|ZP_08095243.1| alanyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
gi|323396318|gb|EGA89143.1| alanyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
Length = 874
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/187 (31%), Positives = 88/187 (47%), Gaps = 39/187 (20%)
Query: 282 RYNKQFVDSVSSGTEA-GILLDKSNF--YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGIL 338
R +Q V+S+ S +E G + + S F Y++ + + + VDS G E ++
Sbjct: 434 RNARQNVNSMQSQSEVLGNIKEASEFIGYSQTVSDANVLFIIKDGELVDSAQEGEEVEVI 493
Query: 339 LDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKK 398
LD++ FYAE GGQI D G + ND F+Q S+ N+KK
Sbjct: 494 LDQTPFYAESGGQIADRGTL--SND-----------------------FVQASVLNVKKA 528
Query: 399 KKLVKLLHTLSHTLRVGD------KLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEA 452
L H++RV ++ +D + RR + NHTATH+L+ AL+ VLG
Sbjct: 529 PNGQNL-----HSVRVNTGELTKTSVQAQVDASERRHTVKNHTATHLLHQALKDVLGTHV 583
Query: 453 DQKGSLV 459
+Q GS V
Sbjct: 584 NQAGSYV 590
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 51/98 (52%), Gaps = 12/98 (12%)
Query: 226 KRLRFSYNKQFVDSVSSGTEA-GILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYN 284
+R R +Q V+S+ S +E G + + S F G+ V+D V+ + +
Sbjct: 429 QRDRARNARQNVNSMQSQSEVLGNIKEASEFI----------GYSQTVSD-ANVLFIIKD 477
Query: 285 KQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
+ VDS G E ++LD++ FYAE GGQI D G +SN
Sbjct: 478 GELVDSAQEGEEVEVILDQTPFYAESGGQIADRGTLSN 515
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 44/65 (67%), Gaps = 4/65 (6%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA----KKKAQSEPESQAGMETS 69
+PG+ A+RLYDTYGFPV+LT+ EE+G++VD + +E A + +A++ ++ M++
Sbjct: 387 IPGEDAFRLYDTYGFPVELTEEYAEEEGMAVDHKGFETAMQEQRDRARNARQNVNSMQSQ 446
Query: 70 VEFCG 74
E G
Sbjct: 447 SEVLG 451
>gi|187478846|ref|YP_786870.1| alanyl-tRNA synthetase [Bordetella avium 197N]
gi|123514444|sp|Q2KY72.1|SYA_BORA1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|115423432|emb|CAJ49966.1| alanyl-tRNA synthetase [Bordetella avium 197N]
Length = 873
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 67/135 (49%), Gaps = 27/135 (20%)
Query: 327 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPI 386
D V +G +A ++LD + FYAE GGQ+ D G ++
Sbjct: 478 DQVRAGQQAVVVLDATPFYAESGGQVGDTGLLVADG------------------------ 513
Query: 387 FLQFSLSNLKKKKKLVKLLHTL--SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
L+F++++ K + V H L L+VGD L +D RR + NH+ATH+++ AL
Sbjct: 514 -LRFAVADTLKVQAGVFGHHGLLEEGVLKVGDTLLARVDAVRRARTVRNHSATHLMHKAL 572
Query: 445 RFVLGPEADQKGSLV 459
R VLG Q+GSLV
Sbjct: 573 REVLGAHVQQRGSLV 587
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+A++ + +L G+ + LYDTYGFPVDLT + E+ + +DM +E A ++ + + +
Sbjct: 377 ALAQVPKGGLLDGNTLFTLYDTYGFPVDLTADICREREVEIDMAGFEAAMERQRDQARA 435
>gi|425467555|ref|ZP_18846835.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9809]
gi|389829651|emb|CCI28862.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9809]
Length = 874
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+S ++GTE ++LDK+ FYAE GGQI D+G++ G N L+ +E +
Sbjct: 475 VESAAAGTEVQVVLDKTPFYAESGGQIGDKGYLTGDN----------LLIRIEDVQKESG 524
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
IF+ F + ++ +V GD + ID + RR +NHTATH+L AL+
Sbjct: 525 IFIHFG----RIERGIVT----------TGDTINAQIDRSCRRRAQANHTATHLLQSALK 570
Query: 446 FVLGPEADQKGSLV 459
++ Q GSLV
Sbjct: 571 KLVDGGISQAGSLV 584
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+L++I + +S++ G A+ LYDTYGFP++LTQ + EE+GLSVD +E KK Q
Sbjct: 368 LLESILEKEKSQI-SGVDAFTLYDTYGFPLELTQEIAEEQGLSVDTAGFEQEMKKQQQ-- 424
Query: 61 ESQAGMETSVEFCGGTHLAMAHHV 84
S+A ET G+ +A H+
Sbjct: 425 RSKAAHETIDLTVQGSLDKLAEHI 448
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
V+S ++GTE ++LDK+ FYAE GGQI D+G++ G N
Sbjct: 475 VESAAAGTEVQVVLDKTPFYAESGGQIGDKGYLTGDN 511
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS-GTE 334
TV + + V+S ++GTE ++LDK+ FYAE GGQI D+G+++ + + E
Sbjct: 463 ATVTAVLVAGKTVESAAAGTEVQVVLDKTPFYAESGGQIGDKGYLTGDNLLIRIEDVQKE 522
Query: 335 AGILL 339
+GI +
Sbjct: 523 SGIFI 527
>gi|357124653|ref|XP_003564012.1| PREDICTED: probable alanyl-tRNA synthetase, chloroplastic-like
isoform 2 [Brachypodium distachyon]
Length = 977
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 22/162 (13%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+G + + V+ VS G++ ILLD++ FYAE GGQ+ D GF+ +E + ++++
Sbjct: 555 KGLLIDGNPVEHVSEGSDVEILLDRTPFYAESGGQVGDNGFLYVYEEEGGKQ---NTVIE 611
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
++ +Q SL N+ K +K ++ VG K+ +D R+ ++HTA
Sbjct: 612 IKD--------VQKSLGNIFVHKGTIK-----QGSVDVGKKIDAAVDGKLRQGAKAHHTA 658
Query: 437 THILNHALRFVLGPEADQKGSLV------YRYHLHENIMECE 472
TH+L AL+ V+G E Q GSLV + + H + E E
Sbjct: 659 THLLQSALKSVIGSETSQAGSLVAFDRLRFDFSFHRPLSEKE 700
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 38/54 (70%), Gaps = 4/54 (7%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQS 58
G++ L G+ + LYDTYGFPV++T + E+G++VDM+ + E+ +K++Q+
Sbjct: 465 GDNPCLSGEDVFLLYDTYGFPVEITAEIAGERGVTVDMKGFDIEMENQRKQSQA 518
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 222 TPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEG 276
T VK L N V+ VS G++ ILLD++ FYAE GGQ+ D GF+ +EG
Sbjct: 551 TAVVKGLLIDGNP--VEHVSEGSDVEILLDRTPFYAESGGQVGDNGFLYVYEEEG 603
>gi|261867354|ref|YP_003255276.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261412686|gb|ACX82057.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 874
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 32/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++SSG A ++LD + FYAE GGQI D G LEG+ +
Sbjct: 479 VDTISSGQSAVVILDNTPFYAESGGQIGDIG-------------------RLEGNGF--- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F + + +K ++ + L+ +L VG + +D RR+ I NH+ATH+L+ AL
Sbjct: 517 ---NFDVKDTQKYGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQRISLNHSATHLLHAAL 573
Query: 445 RFVLGPEADQKGSLV------YRYHLHENIMECE 472
R VLG QKGSLV + + HE I + +
Sbjct: 574 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQ 607
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGME 67
KVL G+VA++LYDTYGFP+DLT + E+G+++D +E ++ +++ SQ GM+
Sbjct: 387 KVLSGEVAFKLYDTYGFPLDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGMD 444
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
V L ++ + VD++SSG A ++LD + FYAE GGQI D G + F
Sbjct: 469 VTALFHDGKPVDTISSGQSAVVILDNTPFYAESGGQIGDIGRLEGNGF 516
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VD++SSG A ++LD + FYAE GGQI D G + G
Sbjct: 479 VDTISSGQSAVVILDNTPFYAESGGQIGDIGRLEG 513
>gi|416177138|ref|ZP_11609941.1| alanyl-tRNA synthetase [Neisseria meningitidis M6190]
gi|325132719|gb|EGC55402.1| alanyl-tRNA synthetase [Neisseria meningitidis M6190]
Length = 881
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 23/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD ++ G +++D + FYAE GGQ+ D G++ + E++ E+ L+ K
Sbjct: 484 VDELNEGDSGAVVIDFTPFYAESGGQVGDVGYIF--SGENRFEV-------LDTQKIKAA 534
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
+F QF + S L+VGD + +D R M NH+ATH+++ ALR
Sbjct: 535 VFGQFGVQT--------------SGRLKVGDSVTAKVDDEIRNANMRNHSATHLMHKALR 580
Query: 446 FVLGPEADQKGSLV 459
VLG +QKGSLV
Sbjct: 581 DVLGRHVEQKGSLV 594
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 27/40 (67%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
SK L G++ ++LYDTYGFP DLT + E+ + +D +E
Sbjct: 392 SKKLDGEIIFKLYDTYGFPYDLTADICRERNIELDEAGFE 431
>gi|319944272|ref|ZP_08018548.1| alanine--tRNA ligase [Lautropia mirabilis ATCC 51599]
gi|319742567|gb|EFV94978.1| alanine--tRNA ligase [Lautropia mirabilis ATCC 51599]
Length = 882
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 74/152 (48%), Gaps = 32/152 (21%)
Query: 329 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFL 388
+ +G E ++LD S FYAE GGQ+ D+G + G L
Sbjct: 484 LKAGDEGVVVLDVSPFYAESGGQVGDQGHLQGQG-------------------------L 518
Query: 389 QFSLSNLKKKKKLVKLLHTLSH--TLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRF 446
+F++S+ +K + V H +L+VGD ++ ++TA R+ NH+ATH+L+ ALR
Sbjct: 519 RFAVSDTQKIQAAVWGHHGRVEEGSLKVGDTVQAQVNTALRQKTTRNHSATHLLHKALRQ 578
Query: 447 VLGPEADQKGSLVYRYHL-----HENIMECEE 473
VLG QKGSLV H H M EE
Sbjct: 579 VLGDHVAQKGSLVDPDHTRFDFSHNKPMTPEE 610
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA 52
+A L KVL G+ A+RL+DTYGFP+DLT + E+G++VD +E A
Sbjct: 382 ALAGLKGKKVLDGETAFRLHDTYGFPLDLTADVCRERGVTVDEAGFETA 430
>gi|197249925|ref|YP_002147723.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|440764321|ref|ZP_20943350.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440770300|ref|ZP_20949252.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|440773002|ref|ZP_20951903.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|197213628|gb|ACH51025.1| alanyl-tRNA synthetase [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|436412130|gb|ELP10074.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|436416901|gb|ELP14802.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|436417367|gb|ELP15262.1| alanyl-tRNA ligase [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
Length = 876
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 74/135 (54%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ +++ EA ++LD++ FYAE GGQ+ D+G L+G+ +
Sbjct: 480 VEVINAEQEAVVVLDQTPFYAESGGQVGDKG-------------------ELKGAGFT-- 518
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F++ + +K + + + LS L+VGD ++ +D ARR I NH+ATH+++ AL
Sbjct: 519 ----FAVDDTQKYGQAIGHIGKLSAGALKVGDAVQADVDEARRARIRLNHSATHLMHAAL 574
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 575 RQVLGTHVAQKGSLV 589
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+ + VD +E A ++ +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERKIKVDEAGFEAAMEEQRRRARE 438
Query: 63 QAG----------METSVEFCGGTHLAM 80
+G ++++ EF G HL +
Sbjct: 439 ASGFGADYNAMIRVDSASEFKGYDHLEL 466
>gi|422016607|ref|ZP_16363189.1| alanyl-tRNA ligase [Providencia burhodogranariea DSM 19968]
gi|414092642|gb|EKT54316.1| alanyl-tRNA ligase [Providencia burhodogranariea DSM 19968]
Length = 875
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 78/153 (50%), Gaps = 31/153 (20%)
Query: 314 IYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSS 373
IY +G Q VDS+++G E ++LDK+ FYAE GGQ+ D G
Sbjct: 473 IYKDG-----QPVDSLNAGDEGLVILDKTAFYAESGGQVGDTGI---------------- 511
Query: 374 LVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMS 432
L N GS F++++ +K + + + + S +L + ++ ID RR I
Sbjct: 512 LHNDSGS---------FTVTDTQKYGQAIGHIGKVESGSLVINHRIDAKIDVKRRDAIRL 562
Query: 433 NHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
NH+ATH+L+ ALR VLG QKGSLV +L
Sbjct: 563 NHSATHLLHAALRQVLGEHVAQKGSLVNDKYLR 595
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 10/75 (13%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFP+DLT + E+ + VD E +E A + + +G
Sbjct: 389 TLEGETAFRLYDTYGFPIDLTADVCRERNIKVDEEGFERAMEDQRRRARESSGFGADYNS 448
Query: 66 ---METSVEFCGGTH 77
+E EF G T+
Sbjct: 449 LIKIEKHSEFSGYTY 463
Score = 42.4 bits (98), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 17/70 (24%)
Query: 220 KHTPFVKRLRFSYNKQF------------VDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 267
KH+ F ++YN+Q VDS+++G E ++LDK+ FYAE GGQ+ D G
Sbjct: 454 KHSEFSG---YTYNEQLATITAIYKDGQPVDSLNAGDEGLVILDKTAFYAESGGQVGDTG 510
Query: 268 FMIGVNDEGT 277
+ ND G+
Sbjct: 511 IL--HNDSGS 518
>gi|322831421|ref|YP_004211448.1| alanyl-tRNA synthetase [Rahnella sp. Y9602]
gi|321166622|gb|ADW72321.1| alanyl-tRNA synthetase [Rahnella sp. Y9602]
Length = 875
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 76/159 (47%), Gaps = 37/159 (23%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM---IGVNDESQIELWFSSLVNLEGS 380
Q V+ + +G A ++LD + FY E GGQ+ D+G + GV
Sbjct: 478 QPVNDIQAGVNAIVVLDDTPFYGESGGQVGDKGILKTTTGV------------------- 518
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHI 439
FS+S+ +K K + LS L +GD ++ +D ARR I NH+ATH+
Sbjct: 519 ---------FSVSDTQKYGKAIGHQGALSAGKLSIGDSVEAEVDVARRDRIRLNHSATHL 569
Query: 440 LNHALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
L+ ALR VLG QKGSLV +L H M+ EE
Sbjct: 570 LHAALRQVLGKHVAQKGSLVNDNYLRFDFSHFEAMKPEE 608
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA----KKKAQSEPESQAGMET 68
L G++A+RLYDT+GFP+DLT + E+ L VD +E A +++A+ A +
Sbjct: 389 TLDGEIAFRLYDTFGFPLDLTADVCRERNLKVDEAGFEKAMDVQRRRARESSGFSADYNS 448
Query: 69 SVEFCGGTHLAMAHHV 84
V G T + H+
Sbjct: 449 MVRVDGVTQFSGYEHL 464
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAG 336
VV L + Q V+ + +G A ++LD + FY E GGQ+ D+G + V SVS + G
Sbjct: 470 VVALFVDGQPVNDIQAGVNAIVVLDDTPFYGESGGQVGDKGILKTTTGVFSVSDTQKYG 528
>gi|422874700|ref|ZP_16921185.1| alanyl-tRNA synthetase [Clostridium perfringens F262]
gi|380304341|gb|EIA16630.1| alanyl-tRNA synthetase [Clostridium perfringens F262]
Length = 879
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+N++F + G + +L DK+ FYAE GGQ+ D G + E+ + + N+ G
Sbjct: 476 NNEEFKAELKEGEDGFLLTDKTPFYAEMGGQVGDRG---NITSETGMAIVTDCKKNVGG- 531
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
K V + + +L+ G ++KL +D +RR I NHTATH+L
Sbjct: 532 -------------------KFVHYIKVIEGSLKEGQEVKLSVDASRRSNICKNHTATHML 572
Query: 441 NHALRFVLGPEADQKGSLVYRYHLH 465
+ AL+ VLG +Q GS V L
Sbjct: 573 HEALKEVLGDHVNQSGSYVDEERLR 597
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETS 69
KVL G A++LYDTYGFP++LTQ ++EEKGL +D+E + + + K Q E A E+S
Sbjct: 383 KVLSGAKAFKLYDTYGFPLELTQEILEEKGLELDIENF-NKEMKEQRERARNARGESS 439
>gi|345429608|ref|YP_004822726.1| alanyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
gi|301155669|emb|CBW15137.1| alanyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
Length = 874
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 69/135 (51%), Gaps = 26/135 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VDS+++G A ++L+ + FYAE GGQI D G++
Sbjct: 479 VDSITAGQSAVVILENTPFYAESGGQIGDSGYLTSQG----------------------- 515
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
+QF++ + +K ++ + L TL+VG + +D ARR NH+ATH+L+ AL
Sbjct: 516 --IQFNVKDTQKYGQVFGHIGELEQGTLKVGQTVNAVVDAARRHQTSLNHSATHLLHAAL 573
Query: 445 RFVLGPEADQKGSLV 459
R VLG QKGSLV
Sbjct: 574 RQVLGHHVVQKGSLV 588
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGME 67
VL G+VA++LYDTYGFP+DLT + E+ +++D +E ++ +++ SQ GM+
Sbjct: 388 VLSGEVAFKLYDTYGFPLDLTADVCRERDIAIDEAGFEREMEAQRLRAQSASQFGMD 444
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 33/46 (71%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
V L ++ + VDS+++G A ++L+ + FYAE GGQI D G+++++
Sbjct: 469 VTALFHDGKSVDSITAGQSAVVILENTPFYAESGGQIGDSGYLTSQ 514
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 219 TKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTV 278
T+ K ++ + VDS+++G A ++L+ + FYAE GGQI D G++ T
Sbjct: 461 TESESLAKVTALFHDGKSVDSITAGQSAVVILENTPFYAESGGQIGDSGYL-------TS 513
Query: 279 VGLRYN 284
G+++N
Sbjct: 514 QGIQFN 519
>gi|444347675|ref|ZP_21155509.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
gi|443548367|gb|ELT57633.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
Length = 744
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 32/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++SSG A ++LD + FYAE GGQI D G LEG+ +
Sbjct: 349 VDTISSGQSAVVILDNTPFYAESGGQIGDIG-------------------RLEGNGF--- 386
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F + + +K ++ + L+ +L VG + +D RR+ I NH+ATH+L+ AL
Sbjct: 387 ---NFDVKDTQKYGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQRISLNHSATHLLHAAL 443
Query: 445 RFVLGPEADQKGSLV------YRYHLHENIMECE 472
R VLG QKGSLV + + HE I + +
Sbjct: 444 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQ 477
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGME 67
KVL G+VA++LYDTYGFP+DLT + E+G+++D +E ++ +++ SQ GM+
Sbjct: 257 KVLSGEVAFKLYDTYGFPLDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGMD 314
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
V L ++ + VD++SSG A ++LD + FYAE GGQI D G + F
Sbjct: 339 VTALFHDGKPVDTISSGQSAVVILDNTPFYAESGGQIGDIGRLEGNGF 386
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 219 TKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
T+ K ++ + VD++SSG A ++LD + FYAE GGQI D G + G
Sbjct: 331 TESETLAKVTALFHDGKPVDTISSGQSAVVILDNTPFYAESGGQIGDIGRLEG 383
>gi|225428201|ref|XP_002278951.1| PREDICTED: probable alanyl-tRNA synthetase, chloroplastic [Vitis
vinifera]
gi|297744517|emb|CBI37779.3| unnamed protein product [Vitis vinifera]
Length = 1006
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 82/162 (50%), Gaps = 23/162 (14%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
EG + N V VS G++ I L+++ FYAE GGQI D GF+ D +Q +++V
Sbjct: 584 EGLLVNGNPVIQVSEGSDVEIFLNRTPFYAESGGQIGDHGFLYVNEDRNQ----KNAVVE 639
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
++ +Q SL N+ K +K + VG +++ +D R+ +HTA
Sbjct: 640 IKD--------VQKSLGNIFVHKGTIK-----EGVVEVGKEVEAAVDANLRQRAKIHHTA 686
Query: 437 THILNHALRFVLGPEADQKGSLV------YRYHLHENIMECE 472
TH+L AL+ V+G E Q GSLV + ++ H + E E
Sbjct: 687 THLLQAALKKVIGDETSQAGSLVAFDRLRFDFNFHRPLQEKE 728
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMET 68
G +L G + LYDTYGFPV++T EE+G+ +DM +E + + +SQA
Sbjct: 494 GNGPILSGKDVFLLYDTYGFPVEITTEAAEERGVGIDMNGFEIEMENQRR--QSQAA-HN 550
Query: 69 SVEFCGGTHLAMAHHVGD 86
+V+ G + ++ D
Sbjct: 551 AVKLAVGNSADLTENISD 568
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
+ + GL N V VS G++ I L+++ FYAE GGQI D GF+
Sbjct: 580 KAVIEGLLVNGNPVIQVSEGSDVEIFLNRTPFYAESGGQIGDHGFL 625
Score = 38.5 bits (88), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 24/37 (64%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N V VS G++ I L+++ FYAE GGQI D GF+
Sbjct: 589 NGNPVIQVSEGSDVEIFLNRTPFYAESGGQIGDHGFL 625
>gi|120611698|ref|YP_971376.1| alanyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
gi|205829963|sp|A1TRL4.1|SYA_ACIAC RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|120590162|gb|ABM33602.1| alanyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
Length = 948
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 71/140 (50%), Gaps = 28/140 (20%)
Query: 325 FVDSVSS-GTEAG----ILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEG 379
+VD S+ EAG ++LD + FYAE GGQ+ D+G +++ G
Sbjct: 547 YVDGTSAQALEAGQNGVVVLDNTPFYAESGGQVGDQG-----------------VIHAGG 589
Query: 380 SKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHI 439
+++A+ L+ +L S TLRVGD ++ +D A R M NH+ THI
Sbjct: 590 ARFAVDDTLKIRADVYGHHGRLE------SGTLRVGDAVQAEVDAALRAATMRNHSVTHI 643
Query: 440 LNHALRFVLGPEADQKGSLV 459
++ ALR VLG QKGSLV
Sbjct: 644 MHKALREVLGSHVQQKGSLV 663
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 46/64 (71%), Gaps = 2/64 (3%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA--KKKAQSEPESQAGMETSV 70
LPGD+A++L+DTYGFP+DLT + E+G++VD + ++ A ++KAQ+ + M+ ++
Sbjct: 463 TLPGDLAFKLHDTYGFPLDLTNDVCRERGVTVDEDGFKAAMDRQKAQARAAGKFKMDKAL 522
Query: 71 EFCG 74
E+ G
Sbjct: 523 EYGG 526
>gi|365967158|ref|YP_004948720.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|365746071|gb|AEW76976.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
ANH9381]
Length = 874
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 77/154 (50%), Gaps = 32/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++SSG A ++LD + FYAE GGQI D G LEG+ +
Sbjct: 479 VDTISSGQSAVVILDNTPFYAESGGQIGDIG-------------------RLEGNGF--- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F + + +K ++ + L+ +L VG + +D RR+ I NH+ATH+L+ AL
Sbjct: 517 ---NFDVKDTQKYGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQRISLNHSATHLLHAAL 573
Query: 445 RFVLGPEADQKGSLV------YRYHLHENIMECE 472
R VLG QKGSLV + + HE I + +
Sbjct: 574 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQ 607
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGME 67
KVL G+VA++LYDTYGFP+DLT + E+G+++D +E ++ +++ SQ GM+
Sbjct: 387 KVLSGEVAFKLYDTYGFPLDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGMD 444
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
V L ++ + VD++SSG A ++LD + FYAE GGQI D G + F
Sbjct: 469 VTALFHDGKPVDTISSGQSAVVILDNTPFYAESGGQIGDIGRLEGNGF 516
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VD++SSG A ++LD + FYAE GGQI D G + G
Sbjct: 479 VDTISSGQSAVVILDNTPFYAESGGQIGDIGRLEG 513
>gi|255587004|ref|XP_002534095.1| alanyl-tRNA synthetase, putative [Ricinus communis]
gi|223525858|gb|EEF28289.1| alanyl-tRNA synthetase, putative [Ricinus communis]
Length = 815
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 83/164 (50%), Gaps = 23/164 (14%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+ + N + V V G+E ILL+K+ FYAE GGQI D GF+ ES+ ++V
Sbjct: 393 DSLLVNGKPVIQVPEGSEVEILLNKTPFYAESGGQIGDHGFLYVTEGESKPR----AIVE 448
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
++ +Q SL N+ K ++ L VG +++ +D R+ +HTA
Sbjct: 449 IKD--------VQKSLGNVFVHKGTIR-----EGLLEVGREVEAAVDPKLRQRAKVHHTA 495
Query: 437 THILNHALRFVLGPEADQKGSLV------YRYHLHENIMECEEE 474
TH+L AL+ V+G E Q GSLV + ++ H +++ E E
Sbjct: 496 THLLQSALKKVIGQETSQAGSLVAFDRLRFDFNFHRPLLDTELE 539
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 40/65 (61%), Gaps = 6/65 (9%)
Query: 1 MLQTIAKLGESK-VLP---GDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY--EDAKK 54
ML+ G+ K V+P G + LYDTYGFPV++T + EE G+ +DM+ + E K+
Sbjct: 291 MLEDALSSGQKKGVIPCLSGKDVFLLYDTYGFPVEITTEVAEEHGVKIDMDGFDIEMEKQ 350
Query: 55 KAQSE 59
+ QS+
Sbjct: 351 RRQSQ 355
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%)
Query: 281 LRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
L N + V V G+E ILL+K+ FYAE GGQI D GF+
Sbjct: 395 LLVNGKPVIQVPEGSEVEILLNKTPFYAESGGQIGDHGFL 434
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N + V V G+E ILL+K+ FYAE GGQI D GF+
Sbjct: 398 NGKPVIQVPEGSEVEILLNKTPFYAESGGQIGDHGFL 434
>gi|168214257|ref|ZP_02639882.1| alanyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
gi|170714273|gb|EDT26455.1| alanyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
Length = 879
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 70/145 (48%), Gaps = 23/145 (15%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+N++F + G + +L DK+ FYAE GGQ+ D G + E+ + + N+ G
Sbjct: 476 NNEEFKAELKEGEDGFLLTDKTPFYAEMGGQVGDRG---NITSETGMAIVTDCKKNVGG- 531
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
K V + + +L+ G ++KL +D +RR I NHTATH+L
Sbjct: 532 -------------------KFVHYIKVIEGSLKEGQEVKLSVDASRRSNICKNHTATHML 572
Query: 441 NHALRFVLGPEADQKGSLVYRYHLH 465
+ AL+ VLG +Q GS V L
Sbjct: 573 HEALKEVLGDHVNQSGSYVDEERLR 597
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETS 69
KVL G A++LYDTYGFP++LTQ ++EEKGL +D+E + + + K Q E A E+S
Sbjct: 383 KVLSGAKAFKLYDTYGFPLELTQEILEEKGLELDIENF-NKEMKEQRERARNARGESS 439
>gi|312898889|ref|ZP_07758277.1| alanyl-tRNA synthetase [Megasphaera micronuciformis F0359]
gi|310620051|gb|EFQ03623.1| alanyl-tRNA synthetase [Megasphaera micronuciformis F0359]
Length = 868
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 68/140 (48%), Gaps = 23/140 (16%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ T I+LDK+ F+AE GGQI D G++ G + ++++ SL N G Y +
Sbjct: 471 VERAEKDTAITIILDKTPFHAEGGGQIGDTGYITGPSGKAEV-TDTKSLAN--GLTYMIA 527
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
I + SLS GD++ + +D R I NHTATH+L ALR
Sbjct: 528 IVTEGSLSR--------------------GDEVDITVDKVRNLDIARNHTATHLLQAALR 567
Query: 446 FVLGPEADQKGSLVYRYHLH 465
VLG +Q GSLV L
Sbjct: 568 KVLGTHVNQAGSLVTPERLR 587
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEF 72
VL G+ ++LYDT+GFPV+LT+ +V+E G+++D + ++ A KAQ E A + S +
Sbjct: 379 VLAGEKVFKLYDTFGFPVELTEEIVQEHGMTIDHDGFDKA-MKAQQERARAARAKVSAKV 437
Query: 73 C 73
Sbjct: 438 A 438
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 9/76 (11%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVV-------GLRYNKQFVD 289
V+ T I+LDK+ F+AE GGQI D G++ G + + V GL Y V
Sbjct: 471 VERAEKDTAITIILDKTPFHAEGGGQIGDTGYITGPSGKAEVTDTKSLANGLTYMIAIVT 530
Query: 290 --SVSSGTEAGILLDK 303
S+S G E I +DK
Sbjct: 531 EGSLSRGDEVDITVDK 546
>gi|366164567|ref|ZP_09464322.1| alanyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
Length = 879
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 65/144 (45%), Gaps = 29/144 (20%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ N + V + G ++LDK+ FYA GGQ+ DEG++ G ND
Sbjct: 474 IIKNDEVVQTAKEGESVTVILDKTPFYAASGGQVGDEGYIEG-ND--------------- 517
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHT---LSHTLRVGDKLKLHIDTARRRPIMSNHT 435
++ + + KK K LHT TL G +K ID RR I NHT
Sbjct: 518 ---------VRIRIEDCKKTDD-GKYLHTGVVEKGTLETGADVKASIDIRRRTSIARNHT 567
Query: 436 ATHILNHALRFVLGPEADQKGSLV 459
TH+L ALR VLG Q GSLV
Sbjct: 568 TTHLLQKALRNVLGTHVHQAGSLV 591
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 32/45 (71%), Gaps = 2/45 (4%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDME 47
+T AK E+ + G +A+ L+ TYGFP+DLT+ + EE GL++D E
Sbjct: 376 ETKAKNAET--ITGTMAYELHSTYGFPIDLTREISEENGLAIDEE 418
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVND 274
N + V + G ++LDK+ FYA GGQ+ DEG++ G ND
Sbjct: 477 NDEVVQTAKEGESVTVILDKTPFYAASGGQVGDEGYIEG-ND 517
>gi|428224529|ref|YP_007108626.1| alanyl-tRNA synthetase [Geitlerinema sp. PCC 7407]
gi|427984430|gb|AFY65574.1| alanyl-tRNA synthetase [Geitlerinema sp. PCC 7407]
Length = 873
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 67/134 (50%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V++ +GTE I+L+++ FYAE GGQI D G++ G Q+ LV +E K
Sbjct: 475 VEAAEAGTEVQIVLNQTPFYAESGGQIGDRGYLSG----DQV------LVRVEDVKKESD 524
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
F+ F TL+VGD + ID A RR +NH+ATH+L AL+
Sbjct: 525 FFVHFG--------------RIERGTLQVGDSVTAQIDRACRRRAQANHSATHLLQAALK 570
Query: 446 FVLGPEADQKGSLV 459
++ Q GSLV
Sbjct: 571 KIIDDSISQAGSLV 584
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 17/128 (13%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES------- 62
E++ + G+ A++LYDTYGFPV+LTQ + EK L+VD+ +E +K +
Sbjct: 376 ETQQISGEDAFKLYDTYGFPVELTQEIAAEKNLTVDLAGFEVEMEKQRDRSRDAHETIDL 435
Query: 63 --QAGMET------SVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGTFQ 112
Q ++T + EF G T A V + S EA G+ + +
Sbjct: 436 TVQGSLDTLAEHIHATEFLGYTEFAATAQVAVLLVQGKSVEAAEAGTEVQIVLNQTPFYA 495
Query: 113 SHSGSIND 120
G I D
Sbjct: 496 ESGGQIGD 503
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 29/42 (69%)
Query: 288 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSV 329
V++ +GTE I+L+++ FYAE GGQI D G++S Q + V
Sbjct: 475 VEAAEAGTEVQIVLNQTPFYAESGGQIGDRGYLSGDQVLVRV 516
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 26/35 (74%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
V++ +GTE I+L+++ FYAE GGQI D G++ G
Sbjct: 475 VEAAEAGTEVQIVLNQTPFYAESGGQIGDRGYLSG 509
>gi|384256535|ref|YP_005400469.1| alanyl-tRNA synthetase [Rahnella aquatilis HX2]
gi|380752511|gb|AFE56902.1| alanyl-tRNA synthetase [Rahnella aquatilis HX2]
Length = 875
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 76/159 (47%), Gaps = 37/159 (23%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM---IGVNDESQIELWFSSLVNLEGS 380
Q V+ + +G A ++LD + FY E GGQ+ D+G + GV
Sbjct: 478 QPVNDIQAGVNAIVVLDDTPFYGESGGQVGDKGILKTTTGV------------------- 518
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHI 439
FS+S+ +K K + LS L +GD ++ +D ARR I NH+ATH+
Sbjct: 519 ---------FSVSDTQKYGKAIGHQGALSAGKLSIGDSVEAEVDVARRDRIRLNHSATHL 569
Query: 440 LNHALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
L+ ALR VLG QKGSLV +L H M+ EE
Sbjct: 570 LHAALRQVLGKHVAQKGSLVNDNYLRFDFSHFEAMKPEE 608
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA----KKKAQSEPESQAGMET 68
L G++A+RLYDT+GFP+DLT + E+ L VD +E A +++A+ A +
Sbjct: 389 TLDGEIAFRLYDTFGFPLDLTADVCRERNLKVDEAGFEKAMDVQRRRARESSGFSADYNS 448
Query: 69 SVEFCGGTHLAMAHHV 84
V G T + H+
Sbjct: 449 MVRVDGVTQFSGYEHL 464
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAG 336
VV L + Q V+ + +G A ++LD + FY E GGQ+ D+G + V SVS + G
Sbjct: 470 VVALFVDGQPVNDIQAGVNAIVVLDDTPFYGESGGQVGDKGILKTTTGVFSVSDTQKYG 528
>gi|412988532|emb|CCO17868.1| alanyl-tRNA synthetase [Bathycoccus prasinos]
Length = 1194
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 63/127 (49%), Gaps = 30/127 (23%)
Query: 336 GILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNL 395
G++L+ + FYAE GGQ+ D G + N+ G LS
Sbjct: 765 GLILESTPFYAESGGQVSDTGSL-----------------NVNGK----------DLSVS 797
Query: 396 KKKKKLVKLLHTLSH---TLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEA 452
+ K +LH LS ++ VGD +D ARR IM NHT TH++N ALR VLG +
Sbjct: 798 EAKAAAGYILHVLSDDSVSVSVGDACTAQVDVARRSDIMPNHTMTHVVNFALREVLGNDV 857
Query: 453 DQKGSLV 459
+QKGS+V
Sbjct: 858 NQKGSVV 864
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 9 GESK-VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGME 67
GE++ V+ G A+ L++++GFP DLT++M EE GL+++ E ++ K AQ + +
Sbjct: 644 GENRNVISGVEAFLLWESFGFPNDLTEIMCEENGLTLNNEEFDQVFKAAQEKSRMSSKKN 703
Query: 68 TSVEF 72
T V+
Sbjct: 704 TGVDL 708
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 23/41 (56%)
Query: 58 SEPESQAGMETSVEFCGGTHLAMAHHVGDFCISSEEAIAKG 98
S P ++A + S+EFCGGTHL DF I E AKG
Sbjct: 943 SNPSNEAWAKRSIEFCGGTHLKSTAEAEDFAIIEEVGTAKG 983
>gi|357124651|ref|XP_003564011.1| PREDICTED: probable alanyl-tRNA synthetase, chloroplastic-like
isoform 1 [Brachypodium distachyon]
Length = 971
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 22/162 (13%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+G + + V+ VS G++ ILLD++ FYAE GGQ+ D GF+ +E + ++++
Sbjct: 549 KGLLIDGNPVEHVSEGSDVEILLDRTPFYAESGGQVGDNGFLYVYEEEGGKQ---NTVIE 605
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
++ +Q SL N+ K +K ++ VG K+ +D R+ ++HTA
Sbjct: 606 IKD--------VQKSLGNIFVHKGTIK-----QGSVDVGKKIDAAVDGKLRQGAKAHHTA 652
Query: 437 THILNHALRFVLGPEADQKGSLV------YRYHLHENIMECE 472
TH+L AL+ V+G E Q GSLV + + H + E E
Sbjct: 653 THLLQSALKSVIGSETSQAGSLVAFDRLRFDFSFHRPLSEKE 694
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 38/54 (70%), Gaps = 4/54 (7%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQS 58
G++ L G+ + LYDTYGFPV++T + E+G++VDM+ + E+ +K++Q+
Sbjct: 459 GDNPCLSGEDVFLLYDTYGFPVEITAEIAGERGVTVDMKGFDIEMENQRKQSQA 512
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Query: 222 TPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEG 276
T VK L N V+ VS G++ ILLD++ FYAE GGQ+ D GF+ +EG
Sbjct: 545 TAVVKGLLIDGNP--VEHVSEGSDVEILLDRTPFYAESGGQVGDNGFLYVYEEEG 597
>gi|403419671|emb|CCM06371.1| predicted protein [Fibroporia radiculosa]
Length = 921
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 78/143 (54%), Gaps = 28/143 (19%)
Query: 321 SNKQFVDSVSSGT---EAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
SN+ FV S S+ + + GI+LD+++FYAE GGQ +D G +I +
Sbjct: 475 SNRSFVTSTSTTSRDEDFGIVLDRTSFYAESGGQEFDTGSII-----------------I 517
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+G +F ++N++ V + L + L+VG+++ D RR P+ +NHTA
Sbjct: 518 DG-------VAEFEVANVQVFNGYVLHIGHLKYGDLQVGNEVISSYDELRRWPLRNNHTA 570
Query: 437 THILNHALRFVLGPEADQKGSLV 459
THILN LR VLG DQKGSLV
Sbjct: 571 THILNFCLRDVLGDHIDQKGSLV 593
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/51 (56%), Positives = 38/51 (74%), Gaps = 2/51 (3%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
L G WRLYDTYGFPVDLT+LM +E GL+V+ E ++ A +AQS+ S+A
Sbjct: 378 LSGKDVWRLYDTYGFPVDLTRLMADELGLNVNDEEFDAA--QAQSKEASKA 426
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 46/107 (42%), Gaps = 15/107 (14%)
Query: 24 DTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHH 83
+ Y PV + L G VD + + + K +S TS+E CGGTH+
Sbjct: 652 EAYPDPVRVVSL-----GFDVDEIITDISNPKWRS---------TSIELCGGTHVMKTGD 697
Query: 84 VGDFCISSEEAIAKG-SNIVSYCGSKGTFQSHSGSINDEMVNKYPSL 129
+ DF ++ E IAKG IV+ G + + +N+ ++
Sbjct: 698 ITDFIVTEESGIAKGIRRIVAVTGHEAAQARQKANALQAQLNRLETM 744
>gi|88860236|ref|ZP_01134874.1| alanyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
gi|88817434|gb|EAR27251.1| alanyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
Length = 866
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 67/136 (49%), Gaps = 25/136 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q V+S++ G + ++LD++ FYAE GGQ D+G ++ + G
Sbjct: 470 QSVNSLADGQKGIVVLDRTPFYAESGGQAGDKG-----------------ILKIAGG--- 509
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+FS+ N K + + + D++ IDT RR I NHTATH+L+ A
Sbjct: 510 -----EFSVYNTTKLGNAFAHTGVIQGQIALNDRVDAQIDTTRRDNIRKNHTATHLLHEA 564
Query: 444 LRFVLGPEADQKGSLV 459
LR VLG QKGSLV
Sbjct: 565 LRQVLGEHVGQKGSLV 580
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
V+PGDV ++LYDTYGFP DLT + E+ +++D ++ A AQ + QAG
Sbjct: 381 VIPGDVVFKLYDTYGFPADLTADVARERFMTIDEPGFQ-ACMAAQRKMAQQAG 432
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 87/215 (40%), Gaps = 38/215 (17%)
Query: 111 FQSHSGSINDEMVNKYPSLYRLFRTVHKQKYVQDALNVSCLSFRGVWEHGMSV---GWTG 167
F G++ ++M + Y LY+ +++ ++ L + F E G+++ G
Sbjct: 323 FHKLVGALAEQMGDAYQELYK------QREIIEKVLRIEEEQFSKTLERGLAILEDGLKD 376
Query: 168 VAIGALPFGLTVPL--TFGPSLGLVFLAVAEFLFLVSSCGFIGSDTGLGDLSQTKHTPFV 225
+ +P + L T+G L E + GF +Q K
Sbjct: 377 ITGDVIPGDVVFKLYDTYGFPADLTADVARERFMTIDEPGFQACMA-----AQRKMAQQA 431
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNK 285
+ YN+Q KS+ + + G + E F GTV+ L +
Sbjct: 432 GKFGTDYNEQL---------------KSDKHTDFKGYEH-EHF------SGTVIELFFEG 469
Query: 286 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
Q V+S++ G + ++LD++ FYAE GGQ D+G +
Sbjct: 470 QSVNSLADGQKGIVVLDRTPFYAESGGQAGDKGIL 504
>gi|50122289|ref|YP_051456.1| alanyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
gi|59798525|sp|Q6D1T0.1|SYA_ERWCT RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|49612815|emb|CAG76265.1| alanyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
Length = 875
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 31/158 (19%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N VD +++G EA ++L+++ FY E GGQ+ D+G +
Sbjct: 476 NGNAVDQIAAGDEAVVILNETPFYGESGGQVGDQGELKNAG------------------- 516
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
+ F++ + +K + + + L+ LRV D + ++D+ RR I NH+ATH+L
Sbjct: 517 ------VSFAVQDTQKYGQAIGHVGKLTQGMLRVNDSVDANVDSQRRDRIRLNHSATHLL 570
Query: 441 NHALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
+ ALR VLG QKGSLV +L H M+ E+
Sbjct: 571 HAALRQVLGVHVAQKGSLVNDSYLRFDFSHTEAMKPEQ 608
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 10/72 (13%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG------- 65
L G+ A+RLYDTYGFPVDLT + E+GL VD E +E A + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERGLKVDEEGFEAAMTAQRQRARDASGFGVDYNS 448
Query: 66 ---METSVEFCG 74
++ + FCG
Sbjct: 449 LIRVDENTPFCG 460
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 9/57 (15%)
Query: 220 KHTPF---------VKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEG 267
++TPF K + +N VD +++G EA ++L+++ FY E GGQ+ D+G
Sbjct: 454 ENTPFCGYEKTQQQAKVIALYHNGNAVDQIAAGDEAVVILNETPFYGESGGQVGDQG 510
>gi|160871945|ref|ZP_02062077.1| alanyl-tRNA synthetase [Rickettsiella grylli]
gi|159120744|gb|EDP46082.1| alanyl-tRNA synthetase [Rickettsiella grylli]
Length = 871
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 29/160 (18%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ +K + ++ G E ++L K+ FYAE GGQ+ D G++ VN S+
Sbjct: 464 LLDDKDLKEELAEGEEGFVVLTKTPFYAESGGQVGDTGYL--VNATSRF----------- 510
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
F ++ LKK ++ + L+ GDK+K +D +R NH+ATH
Sbjct: 511 -----------FVITTLKKGSLILHRGQLIKGHLKKGDKVKAEVDPKKRHATTLNHSATH 559
Query: 439 ILNHALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
+L+ LR +LG + QKGSLV L + + + CE+
Sbjct: 560 LLHAVLREILGTQVMQKGSLVEPERLRFDFSYSSPLTCEQ 599
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE---DAKKKAQSE 59
Q + KL + K PG VA+RLYDTYGFPVDLT M E+GL +DM + DA+KK E
Sbjct: 369 QELDKLKDKKQFPGLVAFRLYDTYGFPVDLTADMARERGLVIDMAGFTTEMDAQKKKSKE 428
Query: 60 -------PESQAGMETSVEFCG 74
P + + + EF G
Sbjct: 429 ASHFSTTPHVHSSEKKATEFVG 450
>gi|297588300|ref|ZP_06946943.1| alanine--tRNA ligase [Finegoldia magna ATCC 53516]
gi|297573673|gb|EFH92394.1| alanine--tRNA ligase [Finegoldia magna ATCC 53516]
Length = 873
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 23/146 (15%)
Query: 327 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPI 386
+++++G ILLD + FY E GGQ+ D+G + ND + E++ + K +
Sbjct: 474 NNLNAGQMGIILLDCTTFYGEGGGQVGDKGII--YNDNFKAEVY-------DTKKTGKKV 524
Query: 387 FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRF 446
FL + + + +L VGDK+ + +D RR IM NH+ATH+L+ AL+
Sbjct: 525 FLHY--------------VKVIEGSLNVGDKVTIEVDELNRRDIMKNHSATHLLHQALKD 570
Query: 447 VLGPEADQKGSLVYRYHLHENIMECE 472
V+G +Q GS V L +I E
Sbjct: 571 VVGDHVNQAGSYVDGERLRFDITHFE 596
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 5/80 (6%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKA 56
+L ++ K +S V G+ A++LYDTYGFP+DLT+ +V E +VD + + E+ K++A
Sbjct: 368 ILDSMLKETDSDVFSGENAFKLYDTYGFPIDLTKELVGEVNKTVDEDEFKKLMEEQKERA 427
Query: 57 Q-SEPESQAGMETSVEFCGG 75
+ S ES G + ++ G
Sbjct: 428 RGSRNESNMGWSSDKKYGEG 447
>gi|297812419|ref|XP_002874093.1| aminoacyl-tRNA synthetase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297319930|gb|EFH50352.1| aminoacyl-tRNA synthetase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 978
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 73/134 (54%), Gaps = 18/134 (13%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V VS G++ ILLD++ FYAE GGQI D GF+ VN + E +++V + + +L
Sbjct: 565 VIKVSEGSKVEILLDRTPFYAESGGQIADHGFLY-VNSDGNQE---NAVVEVSDVQKSLK 620
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
IF+ K VK S L VG +++ +D R+ +HTATH+L AL+
Sbjct: 621 IFVH---------KGTVK-----SGALEVGKEVEAAVDADLRQRAKVHHTATHLLQSALK 666
Query: 446 FVLGPEADQKGSLV 459
V+G E Q GSLV
Sbjct: 667 KVVGQETSQAGSLV 680
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 31/44 (70%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
K + L G A+ LYDTYGFPV++T + EE+G+S+DM+ +E
Sbjct: 464 KTKNTPYLDGKDAFLLYDTYGFPVEITAEVAEERGVSIDMKGFE 507
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 28/40 (70%), Gaps = 1/40 (2%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEG 276
V VS G++ ILLD++ FYAE GGQI D GF+ VN +G
Sbjct: 565 VIKVSEGSKVEILLDRTPFYAESGGQIADHGFLY-VNSDG 603
>gi|319794254|ref|YP_004155894.1| alanyL-tRNA synthetase [Variovorax paradoxus EPS]
gi|315596717|gb|ADU37783.1| alanyl-tRNA synthetase [Variovorax paradoxus EPS]
Length = 874
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 69/136 (50%), Gaps = 27/136 (19%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ + G ++LD + FY+E GGQ+ D+G +++ EG
Sbjct: 479 VNELKEGQPGIVVLDTTPFYSESGGQVGDQG-----------------VLSAEG------ 515
Query: 386 IFLQFSLSNLKKKKKLVKLLH--TLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+QF + + +K K V H TL+VGD +K +D ARR M NH+ TH+++ A
Sbjct: 516 --VQFGVEDTQKIKADVFGHHGTQTQGTLKVGDAVKAAVDGARRNATMRNHSVTHLMHKA 573
Query: 444 LRFVLGPEADQKGSLV 459
LR VLG QKGSLV
Sbjct: 574 LREVLGDHVQQKGSLV 589
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%), Gaps = 2/68 (2%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA--KKKAQSEPESQAGM 66
G +K LPGDVA++L+DTYGFP+DL+ + E+G+SVD + A K+KA + M
Sbjct: 385 GGAKTLPGDVAFKLHDTYGFPLDLSADVCRERGVSVDEAGFNVAMEKQKAAGRAGGKFKM 444
Query: 67 ETSVEFCG 74
+ +VE+ G
Sbjct: 445 DRNVEYTG 452
>gi|429765850|ref|ZP_19298130.1| alanine--tRNA ligase [Clostridium celatum DSM 1785]
gi|429185703|gb|EKY26677.1| alanine--tRNA ligase [Clostridium celatum DSM 1785]
Length = 905
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 27/147 (18%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
+++ FV+ ++ GT+ IL K+ FYAE GGQI D G + G N GS
Sbjct: 502 TDEAFVEELTEGTKGYILTAKTPFYAEMGGQIGDTGIITGTN----------------GS 545
Query: 381 KYALPIFLQFSLSNLKKK--KKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
Y + N KK K V + + ++++ +++ L++D RR + NHTATH
Sbjct: 546 AY---------VYNTKKNVGGKTVHYVEVKNGSIKLNEEVTLNVDRVRRSSVCKNHTATH 596
Query: 439 ILNHALRFVLGPEADQKGSLVYRYHLH 465
+L AL+ ++G Q GS V L
Sbjct: 597 MLQAALKEIVGSHVHQAGSFVDNERLR 623
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYN 284
K + + ++ FV+ ++ GT+ IL K+ FYAE GGQI D G + G N V + N
Sbjct: 496 KVIVLATDEAFVEELTEGTKGYILTAKTPFYAEMGGQIGDTGIITGTNGSAYVYNTKKN 554
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 47/67 (70%), Gaps = 3/67 (4%)
Query: 5 IAKLGESK--VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
I +L ESK VL G+ A++LYDTYGFP++LT+ ++EEK ++VD E ++ + +AQ E
Sbjct: 400 IKELEESKATVLSGEKAFKLYDTYGFPLELTEEILEEKNMTVDHEEFK-KEMEAQRERAR 458
Query: 63 QAGMETS 69
A ETS
Sbjct: 459 SARGETS 465
Score = 41.6 bits (96), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
G V+ L ++ FV+ ++ GT+ IL K+ FYAE GGQI D G ++
Sbjct: 495 GKVIVLATDEAFVEELTEGTKGYILTAKTPFYAEMGGQIGDTGIIT 540
>gi|422301547|ref|ZP_16388914.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9806]
gi|389789462|emb|CCI14537.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9806]
Length = 874
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+S ++GTE ++LDK+ FYAE GGQI D+G++ G N L+ +E +
Sbjct: 475 VESAAAGTEVQVVLDKTPFYAESGGQIGDKGYLTGDN----------LLIRVEDVQKESG 524
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
IF+ F + ++ +V GD + ID + RR +NHTATH+L AL+
Sbjct: 525 IFIHFG----RIERGIVT----------TGDTINAQIDRSCRRRAQANHTATHLLQSALK 570
Query: 446 FVLGPEADQKGSLV 459
++ Q GSLV
Sbjct: 571 KLVDGGISQAGSLV 584
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+L++I + +S++ G A+ LYDTYGFP++LTQ + EE+GLSVD +E KK Q
Sbjct: 368 LLESILEKEKSQI-SGVDAFTLYDTYGFPLELTQEIAEEQGLSVDTAGFEQEMKKQQQ-- 424
Query: 61 ESQAGMETSVEFCGGTHLAMAHHV 84
S+A ET G+ +A H+
Sbjct: 425 RSKAAHETIDLTVQGSLDKLAEHI 448
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
V+S ++GTE ++LDK+ FYAE GGQI D+G++ G N
Sbjct: 475 VESAAAGTEVQVVLDKTPFYAESGGQIGDKGYLTGDN 511
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS-GTE 334
TV + + V+S ++GTE ++LDK+ FYAE GGQI D+G+++ + V E
Sbjct: 463 ATVTAVLVAGKTVESAAAGTEVQVVLDKTPFYAESGGQIGDKGYLTGDNLLIRVEDVQKE 522
Query: 335 AGILL 339
+GI +
Sbjct: 523 SGIFI 527
>gi|257059315|ref|YP_003137203.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 8802]
gi|256589481|gb|ACV00368.1| alanyl-tRNA synthetase [Cyanothece sp. PCC 8802]
Length = 879
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 24/143 (16%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+ + + + V++ S+GTE I+LD++ FY E GGQI D G++ G N +V
Sbjct: 471 QAVLVDGKTVENASAGTEVQIILDQTPFYGESGGQIGDRGYLTGDN----------LVVR 520
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+E K IF+ F + ++ ++ + +T++ T ID A RR + ++HTA
Sbjct: 521 IEDVKKESGIFVHFG----RVERGIIAVENTVTAT----------IDRACRRRVQAHHTA 566
Query: 437 THILNHALRFVLGPEADQKGSLV 459
TH+L AL+ V+ Q GSLV
Sbjct: 567 THLLQAALKKVVDESISQAGSLV 589
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 2/84 (2%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+ + IAK ++ + G A+ LYDTYGFP++LTQ + EE+GL+VD+E +E A K+ Q
Sbjct: 372 LAEIIAKTPKNTAISGVDAFTLYDTYGFPLELTQEIAEEQGLTVDVEGFEAAMKEQQE-- 429
Query: 61 ESQAGMETSVEFCGGTHLAMAHHV 84
S+A ET G+ +A H+
Sbjct: 430 RSKAAHETIDLTVQGSLDKLAEHI 453
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
V++ S+GTE I+LD++ FY E GGQI D G++ G N
Sbjct: 480 VENASAGTEVQIILDQTPFYGESGGQIGDRGYLTGDN 516
>gi|163746280|ref|ZP_02153638.1| alanyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
gi|161380165|gb|EDQ04576.1| alanyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
Length = 885
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 70/133 (52%), Gaps = 24/133 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V++ S+G++ + L+++ FYAE GGQ+ D G + +Q + +VN+ ++ +
Sbjct: 479 VEAASAGSDVQVALNQTPFYAESGGQVGDTGVI-----RTQ-----TGIVNVTDTRKSAG 528
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
+F+ F H + ++ G L +D ARR I +NH+ATH+L+ ALR
Sbjct: 529 VFVHFG--------------HVIEGEVKPGQSAVLEVDRARRSAIRANHSATHLLHEALR 574
Query: 446 FVLGPEADQKGSL 458
LG Q+GSL
Sbjct: 575 NALGDHVSQRGSL 587
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA----KKKAQS 58
L E LPG+ A++LYDT+GFP+DLTQ + EKG +VD + + A K KA++
Sbjct: 377 LPEGATLPGEAAFKLYDTFGFPLDLTQDALREKGRAVDTDGFNTAMEAQKAKARA 431
>gi|408793986|ref|ZP_11205591.1| alanine--tRNA ligase [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408461221|gb|EKJ84951.1| alanine--tRNA ligase [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 918
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 76/147 (51%), Gaps = 31/147 (21%)
Query: 325 FVDSVS-----SGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEG 379
FVD S G++A ++LDK+ FYAE GGQI D G++ EG
Sbjct: 474 FVDGKSVKEAIQGSDAVVVLDKTPFYAEGGGQIGDWGYL-----------------KKEG 516
Query: 380 SKYALPIFLQFSLSNLKKKKK-LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
QF + + +K+ + + L L + VG+ ++ IDTARR+ + ++H+ TH
Sbjct: 517 --------FQFQVQDTQKENETFLHLGIILKGKISVGETIEAEIDTARRQNLANHHSGTH 568
Query: 439 ILNHALRFVLGPEADQKGSLVYRYHLH 465
+LN ALR +LG QKGS+V +L
Sbjct: 569 LLNGALRRILGTHVAQKGSIVSSDYLR 595
>gi|37525217|ref|NP_928561.1| alanyl-tRNA synthetase [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|41018167|sp|Q7N7A5.1|SYA_PHOLL RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|36784644|emb|CAE13544.1| alanyl-tRNA synthetase (alanine--tRNA ligase) [Photorhabdus
luminescens subsp. laumondii TTO1]
Length = 876
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 30/202 (14%)
Query: 270 IGVNDEGTVVGLRYNKQFVDSVSS-GTEAGILL---DKSNF--YAEQGGQIYDEGFMSNK 323
I V++ G V + ++ S GT+ L+ ++S+F Y Q +
Sbjct: 419 ISVDEAGFAVAMENQRRRARESSGFGTDYNELIKVDERSDFSGYDHNEQQATVTAIFRDG 478
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+ V+ + +G EA ++LDK+ FYAE GGQ+ D G + N + ++ KY
Sbjct: 479 ESVNQIQAGEEAIVILDKTAFYAESGGQVGDSGILSNTN---------CAFCVIDTQKYG 529
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
I ++ K +K TL V + ID RR I NH+ATH+L+ A
Sbjct: 530 QAI------GHIGKLEK---------GTLSVNHNINAVIDIERRDAIRLNHSATHLLHAA 574
Query: 444 LRFVLGPEADQKGSLVYRYHLH 465
LR +LG QKGSLV +L
Sbjct: 575 LRQILGEHVSQKGSLVNDKYLR 596
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
+AKL +L G+ A+RLYDTYGFPVDLT + E+ +SVD + A + + +
Sbjct: 383 LAKLS-GDILDGETAFRLYDTYGFPVDLTADVCRERNISVDEAGFAVAMENQRRRARESS 441
Query: 65 GMET 68
G T
Sbjct: 442 GFGT 445
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
V+ + +G EA ++LDK+ FYAE GGQ+ D G + N
Sbjct: 481 VNQIQAGEEAIVILDKTAFYAESGGQVGDSGILSNTN 517
>gi|349574762|ref|ZP_08886696.1| alanine--tRNA ligase [Neisseria shayeganii 871]
gi|348013636|gb|EGY52546.1| alanine--tRNA ligase [Neisseria shayeganii 871]
Length = 874
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ + G ++LD + FYAE GGQ+ D G++ + ++ + K
Sbjct: 477 VNELHEGETGTVVLDHTPFYAESGGQVGDVGYIFAGGNRFEVR---------DTQKIKAA 527
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
+F QF + +S +L+VGD ++ ID R M NH+ATH+++ ALR
Sbjct: 528 VFGQFGV--------------LVSGSLKVGDAVRAEIDNDIRNANMRNHSATHLMHRALR 573
Query: 446 FVLGPEADQKGSLV 459
VLG +QKGSLV
Sbjct: 574 EVLGSHVEQKGSLV 587
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
G L G++ ++LYDTYGFP DLT + E+G+ +D +E
Sbjct: 383 GSQNTLDGEIIFKLYDTYGFPYDLTADICRERGIEMDEAGFE 424
>gi|17229910|ref|NP_486458.1| alanyl-tRNA synthetase [Nostoc sp. PCC 7120]
gi|20532251|sp|Q8YUD4.1|SYA_NOSS1 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|17131510|dbj|BAB74117.1| alanyl-tRNA synthetase [Nostoc sp. PCC 7120]
Length = 880
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 63/133 (47%), Gaps = 24/133 (18%)
Query: 327 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPI 386
+ +GTE I+LD++ FYAE GGQI D G++ G +V +E K
Sbjct: 483 EEAEAGTEVQIVLDETPFYAESGGQIGDRGYISG----------DGIVVQVEDVKKESDF 532
Query: 387 FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRF 446
F+ F TLRVGD + ID A RR +NHTATH+L AL+
Sbjct: 533 FVHFG--------------RIERGTLRVGDNVTAQIDRAGRRRAQANHTATHLLQAALKT 578
Query: 447 VLGPEADQKGSLV 459
++ Q GSLV
Sbjct: 579 IVDGGISQAGSLV 591
Score = 45.1 bits (105), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 41/65 (63%), Gaps = 6/65 (9%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
++ + K G++ V+ G A+ LYDT+GFP++LTQ + EE L+VD+E ++ Q E
Sbjct: 375 IIAEVKKQGKT-VISGKDAFTLYDTHGFPLELTQEIAEENNLTVDVEGFQ-----KQMEI 428
Query: 61 ESQAG 65
+ Q G
Sbjct: 429 QQQGG 433
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 238 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVD 289
+ +GTE I+LD++ FYAE GGQI D G++ G +G VV + K+ D
Sbjct: 483 EEAEAGTEVQIVLDETPFYAESGGQIGDRGYISG---DGIVVQVEDVKKESD 531
>gi|359489960|ref|XP_002269399.2| PREDICTED: alanyl-tRNA synthetase-like [Vitis vinifera]
Length = 576
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 80/151 (52%), Gaps = 23/151 (15%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQI--YDEGFMIGVNDESQIELWFSSLV------ 375
+F++S ++G E GI+L+ ++FY E+GGQ + + D + L S++
Sbjct: 80 EFLESAAAGDEVGIILETTSFYTEKGGQFDPVESAPEVPKLDTLTVRLSSGSILMDLIFD 139
Query: 376 --NLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHT-----LRVGDKLKLHIDTARRR 428
+LEGS + F +SN++ V LH S T VGDK+ +D RR+
Sbjct: 140 TGSLEGSCGS------FQVSNVQIYGGFV--LHIGSVTGEIGRFSVGDKVICKVDYDRRK 191
Query: 429 PIMSNHTATHILNHALRFVLGPEADQKGSLV 459
I NHT TH+LN A+R VLG DQKGS+V
Sbjct: 192 LIAPNHTYTHMLNFAMREVLGNHVDQKGSIV 222
>gi|425457103|ref|ZP_18836809.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9807]
gi|389801631|emb|CCI19224.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9807]
Length = 874
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 70/134 (52%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+S +SGTE ++LD++ FYAE GGQI D+G++ G N L+ +E +
Sbjct: 475 VESAASGTEVQVVLDQTPFYAESGGQIGDKGYLTGDN----------LLIRVEDVQKESG 524
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
IF+ F + ++ +V GD + ID + RR +NHTATH+L AL+
Sbjct: 525 IFIHFG----RIERGIVT----------TGDTINAQIDRSCRRRAQANHTATHLLQSALK 570
Query: 446 FVLGPEADQKGSLV 459
++ Q GSLV
Sbjct: 571 KLVDGGISQAGSLV 584
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+L++I + +S++ G A+ LYDTYGFP++LTQ + EE+GLSVD +E KK Q
Sbjct: 368 LLESILEKEKSQI-SGVDAFTLYDTYGFPLELTQEIAEEQGLSVDTAGFEQEMKKQQQ-- 424
Query: 61 ESQAGMETSVEFCGGTHLAMAHHV 84
S+A ET G+ +A H+
Sbjct: 425 RSKAAHETIDLTVQGSLDKLAEHI 448
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
V+S +SGTE ++LD++ FYAE GGQI D+G++ G N
Sbjct: 475 VESAASGTEVQVVLDQTPFYAESGGQIGDKGYLTGDN 511
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS-GTE 334
TV + + V+S +SGTE ++LD++ FYAE GGQI D+G+++ + V E
Sbjct: 463 ATVTAVLVAGKTVESAASGTEVQVVLDQTPFYAESGGQIGDKGYLTGDNLLIRVEDVQKE 522
Query: 335 AGILL 339
+GI +
Sbjct: 523 SGIFI 527
>gi|257869401|ref|ZP_05649054.1| alanyl-tRNA synthetase [Enterococcus gallinarum EG2]
gi|257803565|gb|EEV32387.1| alanyl-tRNA synthetase [Enterococcus gallinarum EG2]
Length = 880
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 27/149 (18%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ +Q +D+V++G EA ++ ++ FYAE GGQ+ D G ++ D+S +
Sbjct: 476 IIQEEQLLDTVTTG-EAKLIFKETPFYAEMGGQVADTGTVV---DQSGV----------- 520
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHT--LRVGDKLKLHIDTARRRPIMSNHTA 436
+ ++++KK + LHT T L G L +D RR I+ NHTA
Sbjct: 521 ---------IVAEITDVKKAPN-GQFLHTAKVTGNLTEGASYFLQVDQHRRNKIIKNHTA 570
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ AL+ VLG A+Q GSLV HL
Sbjct: 571 THLLHKALKEVLGSHANQAGSLVAPGHLR 599
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 3 QTIAKLGES--KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
Q IAK+ + L G ++LYDTYGFPV+LT+ + +++GL VD +E
Sbjct: 376 QVIAKVKADGQETLAGADIFKLYDTYGFPVELTEEVAQDEGLKVDHAGFE 425
>gi|103487205|ref|YP_616766.1| alanyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
gi|123253182|sp|Q1GSD9.1|SYA_SPHAL RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|98977282|gb|ABF53433.1| alanyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
Length = 884
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 75/158 (47%), Gaps = 32/158 (20%)
Query: 307 YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQ 366
Y G+ + + Q V+ +G E +L +++ FY E GGQ+ D G
Sbjct: 460 YTSTSGEATVIALVRDGQPVEEARAGDEVIVLTNQTPFYGESGGQMGDAGM--------- 510
Query: 367 IELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHT-----LSHTLRVGDKLKLH 421
+ LEG+K +++ K + LHT + TL+VGD ++L
Sbjct: 511 -------IATLEGAK-----------ASVSDTGKPLGRLHTHQAKLEAGTLKVGDTVQLT 552
Query: 422 IDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
+D RR I +NH+ATH+L+ ALR LG QKGSLV
Sbjct: 553 VDAERRDRIRANHSATHLLHAALRNRLGGHVTQKGSLV 590
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/43 (53%), Positives = 30/43 (69%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD 45
+ A +G L GDVA++LYDTYGFP DLT+ + KG+SVD
Sbjct: 372 EATADMGRGDTLVGDVAFKLYDTYGFPYDLTEDALRSKGISVD 414
>gi|404378464|ref|ZP_10983556.1| alanyl-tRNA synthetase [Simonsiella muelleri ATCC 29453]
gi|294483592|gb|EFG31276.1| alanyl-tRNA synthetase [Simonsiella muelleri ATCC 29453]
Length = 873
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 69/138 (50%), Gaps = 23/138 (16%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
+ + V + G I+LD++ FYAE GGQ+ D G+++ + ++ + K
Sbjct: 473 DSEAVTELHEGETGAIVLDQTPFYAESGGQVGDVGYILAGENRFEVR---------DTQK 523
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
+F QF + +S +L+VGD + ID R M NH+ATH+++
Sbjct: 524 IKAAVFGQFGVQ--------------VSGSLKVGDSVLAEIDNDIRDANMRNHSATHLMH 569
Query: 442 HALRFVLGPEADQKGSLV 459
ALR VLG +QKGSLV
Sbjct: 570 KALREVLGNHVEQKGSLV 587
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 54/119 (45%), Gaps = 7/119 (5%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMET 68
G K L G++ ++LYDTYGFP DLT + E+ + +D ED KA E ++A
Sbjct: 383 GSLKRLNGEIIFKLYDTYGFPYDLTADICREREVEMD----EDGFNKAMDEQRARA--RA 436
Query: 69 SVEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYCGSKGTFQSHSGSINDEMVNKYP 127
+ F T L F SE + + I Y S+ + H G ++++ P
Sbjct: 437 AQNFKANTQLDYNGQDTQFKGYSERKV-NATVIALYKDSEAVTELHEGETGAIVLDQTP 494
>gi|357051732|ref|ZP_09112899.1| alanyl-tRNA synthetase [Enterococcus saccharolyticus 30_1]
gi|355379331|gb|EHG26495.1| alanyl-tRNA synthetase [Enterococcus saccharolyticus 30_1]
Length = 880
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 77/149 (51%), Gaps = 27/149 (18%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ +Q +D+V++G EA ++ ++ FYAE GGQ+ D G ++ D+S +
Sbjct: 476 IIQEEQLLDTVTTG-EAKLIFKETPFYAEMGGQVADTGTVV---DQSGV----------- 520
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHT--LRVGDKLKLHIDTARRRPIMSNHTA 436
+ ++++KK + LHT T L G L +D RR I+ NHTA
Sbjct: 521 ---------IVAEITDVKKAPN-GQFLHTAKVTGNLTEGASYFLQVDQHRRNKIIKNHTA 570
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ AL+ VLG A+Q GSLV HL
Sbjct: 571 THLLHKALKEVLGSHANQAGSLVAPGHLR 599
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 3 QTIAKLGES--KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
Q IAK+ + L G ++LYDTYGFPV+LT+ + +++GL VD +E
Sbjct: 376 QVIAKVKADGQETLAGADIFKLYDTYGFPVELTEEVAQDEGLKVDHAGFE 425
>gi|209884575|ref|YP_002288432.1| alanyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
gi|337741756|ref|YP_004633484.1| alanine-tRNA ligase AlaS [Oligotropha carboxidovorans OM5]
gi|386030772|ref|YP_005951547.1| alanine-tRNA ligase AlaS [Oligotropha carboxidovorans OM4]
gi|209872771|gb|ACI92567.1| alanyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
gi|336095840|gb|AEI03666.1| alanine-tRNA ligase AlaS [Oligotropha carboxidovorans OM4]
gi|336099420|gb|AEI07243.1| alanine-tRNA ligase AlaS [Oligotropha carboxidovorans OM5]
Length = 909
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 76/149 (51%), Gaps = 26/149 (17%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + VDS+++G A ++L+++ FY E GGQ+ D G + G +
Sbjct: 493 LVKDGAVVDSLNAGDAAAVVLNQTPFYGESGGQVGDTGILTG-----------------D 535
Query: 379 GSKYALPIFLQFSLSNLKKKK-KLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
G ++F +++ +KK L + TL L+ G L+L +D RR I +NH+A
Sbjct: 536 GG-------VRFRVTDTQKKAGDLFVHVGTLEQGALKKGAALQLEVDHTRRGAIRANHSA 588
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR VLG Q+GSLV L
Sbjct: 589 THLLHEALRQVLGDHIAQRGSLVSPERLR 617
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
A L + G+ A+ LYDTYGFP+DLTQ + +G+ VD+ + DA ++ +++ +
Sbjct: 396 ASLKPGDMFDGETAFTLYDTYGFPLDLTQDALRTRGIHVDLASFTDAMEQQKAKARA 452
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 9/66 (13%)
Query: 206 FIGSDTGLGDLSQTKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYD 265
F+G DT ++++ T VK + VDS+++G A ++L+++ FY E GGQ+ D
Sbjct: 478 FLGYDT---EIAEGVVTALVK------DGAVVDSLNAGDAAAVVLNQTPFYGESGGQVGD 528
Query: 266 EGFMIG 271
G + G
Sbjct: 529 TGILTG 534
>gi|418054897|ref|ZP_12692952.1| alanyl-tRNA synthetase [Hyphomicrobium denitrificans 1NES1]
gi|353210479|gb|EHB75880.1| alanyl-tRNA synthetase [Hyphomicrobium denitrificans 1NES1]
Length = 897
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 31/162 (19%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+S + + +G E ++L+++ FY E GGQ+ D+G ++
Sbjct: 481 LVSGGKETKELKAGDEGALILNQTPFYGESGGQVGDQGV-------------------IK 521
Query: 379 GSKYALPIFLQFSLSNLKKK--KKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
G K AL F +++ +KK V S + GD ++L +D ARR +NH+A
Sbjct: 522 GPKGAL-----FRVTDTQKKLGDLFVHFGKVESANFKAGDAVELEVDHARRSATRANHSA 576
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
TH+L+ ALR VLG QKGSLV L H M +E
Sbjct: 577 THLLHEALRQVLGTHVAQKGSLVSPDRLRFDFSHTKPMSADE 618
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 37/48 (77%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
++ A + + V PGDVA++LYDTYGFP+DLT+ ++ +G++VD + ++
Sbjct: 381 ESSASMKKGAVFPGDVAFKLYDTYGFPLDLTEDALKPRGITVDTKAFD 428
>gi|150015988|ref|YP_001308242.1| alanyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
gi|205830028|sp|A6LSF6.1|SYA_CLOB8 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|149902453|gb|ABR33286.1| alanyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
Length = 879
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/151 (32%), Positives = 68/151 (45%), Gaps = 31/151 (20%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + F D+++ G +A I+ D + YAE GGQI D G + ND
Sbjct: 474 LIEGEDFTDAITEGNKAIIVTDVTPLYAEMGGQIGDTGVIF--ND--------------- 516
Query: 379 GSKYALPIFLQFSLSNLKKKK----KLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNH 434
F + L KK K+V + +S L+VGD + + +D RR I NH
Sbjct: 517 ----------GFKANVLDTKKNIGGKIVHFVEVVSGELKVGDTVTIEVDKVRRENIKKNH 566
Query: 435 TATHILNHALRFVLGPEADQKGSLVYRYHLH 465
TATH+L+ AL VLG Q GS V L
Sbjct: 567 TATHLLDKALTEVLGSHVHQAGSYVSNDRLR 597
Score = 45.1 bits (105), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 36/56 (64%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
K KVL G ++LYDT+GFP++LT+ ++E++GLS+D + + + K + S
Sbjct: 378 KAKNEKVLSGVDGFKLYDTFGFPMELTKEILEDEGLSLDEDAFHEEMKVQRERARS 433
>gi|212709394|ref|ZP_03317522.1| hypothetical protein PROVALCAL_00430 [Providencia alcalifaciens DSM
30120]
gi|422019431|ref|ZP_16365979.1| alanyl-tRNA ligase [Providencia alcalifaciens Dmel2]
gi|212688306|gb|EEB47834.1| hypothetical protein PROVALCAL_00430 [Providencia alcalifaciens DSM
30120]
gi|414103270|gb|EKT64848.1| alanyl-tRNA ligase [Providencia alcalifaciens Dmel2]
Length = 875
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 75/143 (52%), Gaps = 26/143 (18%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q VDS+ +G E ++LDK+ FYAE GGQ+ D G + ND +Q
Sbjct: 478 QPVDSLHTGDEGLVILDKTAFYAESGGQVGDTGVL--TNDSAQ----------------- 518
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTL-SHTLRVGDKLKLHIDTARRRPIMSNHTATHILNH 442
F++++ +K + + + + S +L V ++ +++ RR I NH+ATH+L+
Sbjct: 519 ------FTVTDTQKYGQAIGHVGKVESGSLVVNHRIAAIVNSERRNAIRLNHSATHLLHA 572
Query: 443 ALRFVLGPEADQKGSLVYRYHLH 465
ALR VLG QKGSLV +L
Sbjct: 573 ALRQVLGEHVSQKGSLVNDKYLR 595
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSN 322
+ T++ L + Q VDS+ +G E ++LDK+ FYAE GGQ+ D G ++N
Sbjct: 467 QATIIALYKDGQPVDSLHTGDEGLVILDKTAFYAESGGQVGDTGVLTN 514
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
L G+ A+RLYDTYGFP+DLT + E+ + VD +E A + + +G
Sbjct: 389 TLEGETAFRLYDTYGFPLDLTADVCRERNIKVDEAGFERAMEDQRRRARESSG 441
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSVSSG 294
Q VDS+ +G E ++LDK+ FYAE GGQ+ D G + + + TV + Q + V
Sbjct: 478 QPVDSLHTGDEGLVILDKTAFYAESGGQVGDTGVLTNDSAQFTVTDTQKYGQAIGHVGK- 536
Query: 295 TEAGILL 301
E+G L+
Sbjct: 537 VESGSLV 543
>gi|416058465|ref|ZP_11580539.1| LOW QUALITY PROTEIN: alanyl-tRNA synthetase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
gi|347999609|gb|EGY40428.1| LOW QUALITY PROTEIN: alanyl-tRNA synthetase [Aggregatibacter
actinomycetemcomitans serotype e str. SCC393]
Length = 514
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 32/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++S+G A ++LD + FYAE GGQI D G LEG+ +
Sbjct: 119 VDTISAGQSAVVILDNTPFYAESGGQIGDIG-------------------RLEGNGF--- 156
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F + + +K ++ + L+ +L VG + +D RR+ I NH+ATH+L+ AL
Sbjct: 157 ---NFDVKDTQKYGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQHISLNHSATHLLHAAL 213
Query: 445 RFVLGPEADQKGSLV------YRYHLHENIMECE 472
R VLG QKGSLV + + HE I + +
Sbjct: 214 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQ 247
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGME 67
KVL G+VA++LYDTYGFP+DLT + E+G+++D +E ++ +++ SQ GM+
Sbjct: 27 KVLSGEVAFKLYDTYGFPLDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGMD 84
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
V L ++ + VD++S+G A ++LD + FYAE GGQI D G + F
Sbjct: 109 VTALFHDGKPVDTISAGQSAVVILDNTPFYAESGGQIGDIGRLEGNGF 156
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 219 TKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
T+ K ++ + VD++S+G A ++LD + FYAE GGQI D G + G
Sbjct: 101 TESETLAKVTALFHDGKPVDTISAGQSAVVILDNTPFYAESGGQIGDIGRLEG 153
>gi|170289222|ref|YP_001739460.1| alanyl-tRNA synthetase [Thermotoga sp. RQ2]
gi|205830279|sp|B1LBS9.1|SYA_THESQ RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|170176725|gb|ACB09777.1| alanyl-tRNA synthetase [Thermotoga sp. RQ2]
Length = 863
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 73/151 (48%), Gaps = 28/151 (18%)
Query: 313 QIYDEG----FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIE 368
++ DEG + + V+ S GT ++ ++ FYAE+GGQ+ D G + + ++ +E
Sbjct: 460 KLEDEGEVVLIARDDETVEEASEGT-VEVVFSRTPFYAEKGGQVSDTGMVEWRDGKALVE 518
Query: 369 LWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRR 428
F + + +V+ + L TLR G K+ L +D RR
Sbjct: 519 YVFEASEGV-----------------------IVQRIKILDGTLRRGQKVVLRVDKKRRE 555
Query: 429 PIMSNHTATHILNHALRFVLGPEADQKGSLV 459
M NHTATH+L+ AL+ VLG Q GSLV
Sbjct: 556 STMRNHTATHLLHAALKKVLGDHVRQAGSLV 586
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 19 AWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFC 73
A+RLYDTYG P++LT + +EKG+ VD++ + ++ Q + + G VEF
Sbjct: 387 AFRLYDTYGLPLELTLEIAKEKGVEVDVQEFNKYMEEQQRKSRAAMG---DVEFA 438
>gi|15606507|ref|NP_213887.1| alanyl-tRNA synthetase [Aquifex aeolicus VF5]
gi|6226165|sp|O67323.1|SYA_AQUAE RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|2983727|gb|AAC07289.1| alanyl-tRNA synthetase [Aquifex aeolicus VF5]
Length = 867
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 70/150 (46%), Gaps = 27/150 (18%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
G + + V + G E ++L ++ FY E GGQI D G +
Sbjct: 466 GLVKGEGLVSELKEGEEGEVVLKETPFYPEGGGQIGDAGII------------------- 506
Query: 378 EGSKYALPIFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHT 435
S AL F + + +K + +V + L TL+VGD + +D RR IM NHT
Sbjct: 507 -ESDKAL-----FKVEDTQKPTEGIIVHIGKVLKGTLKVGDTVHARVDKERRWDIMRNHT 560
Query: 436 ATHILNHALRFVLGPEADQKGSLVYRYHLH 465
ATH+L+ ALR VLG Q GSLV +L
Sbjct: 561 ATHLLHAALRNVLGEHVRQAGSLVADKYLR 590
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 4/51 (7%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQS 58
K L G + YDTYGFPVDL + EKGL +D+E + E+ +++A+
Sbjct: 377 KTLSGKEVFTAYDTYGFPVDLIDEIAREKGLGIDLEGFQCELEEQRERARK 427
>gi|357029346|ref|ZP_09091344.1| alanyl-tRNA synthetase [Mesorhizobium amorphae CCNWGS0123]
gi|355535265|gb|EHH04554.1| alanyl-tRNA synthetase [Mesorhizobium amorphae CCNWGS0123]
Length = 907
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 75/152 (49%), Gaps = 27/152 (17%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+S+ + VDS + G ++++++ FY E GGQ+ D G + G E
Sbjct: 491 LVSDGKTVDSANKGDAVAVVVNQTPFYGESGGQMGDTGVISG-----------------E 533
Query: 379 GSKYALPIFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
G ++S+ +KK V L T++ G ++L +D ARR + +NH+A
Sbjct: 534 G--------FSIAISDTQKKADGLFVHLGTVADGTVKTGAAVELKVDHARRSRLRANHSA 585
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLHENI 468
TH+++ ALR VLG QKGSLV L +I
Sbjct: 586 THLIHEALREVLGTHVAQKGSLVAPERLRFDI 617
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
LG +L G+ A+RLYDTYGFP+DLTQ + ++ +SVD+ + DA ++ ++E
Sbjct: 396 LGAGDMLDGETAFRLYDTYGFPLDLTQDALRQRSISVDLAGFTDAMERQKAE 447
>gi|253990685|ref|YP_003042041.1| Alanyl-tRNA synthetase [Photorhabdus asymbiotica]
gi|253782135|emb|CAQ85299.1| Alanyl-tRNA synthetase [Photorhabdus asymbiotica]
Length = 876
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 30/202 (14%)
Query: 270 IGVNDEGTVVGLRYNKQFVDSVSS-GTEAGILL---DKSNF--YAEQGGQIYDEGFMSNK 323
I V+++G V + ++ S G + L+ ++S+F Y Q N
Sbjct: 419 IKVDEDGFAVAMENQRRRARESSGFGADYNELIKVDERSDFSGYDHNEQQAKVTAIFRNG 478
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
+ V+ + +G EA ++LDK+ FYAE GGQ+ D G + + + ++ KY
Sbjct: 479 ESVNQIQAGEEAIVILDKTAFYAESGGQVGDSGILSNAD---------CAFCVIDTQKYG 529
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
I + L+K TL V +L ID RR I NH+ATH+L+ A
Sbjct: 530 QAIG---HIGKLEKG------------TLSVNHELNAVIDVKRRDAIRLNHSATHLLHAA 574
Query: 444 LRFVLGPEADQKGSLVYRYHLH 465
LR +LG QKGSLV +L
Sbjct: 575 LRQILGEHVSQKGSLVNDKYLR 596
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%), Gaps = 4/49 (8%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVY----EDAKKKAQ 57
+L G+ A+RLYDTYGFPVDLT + E+ + VD + + E+ +++A+
Sbjct: 390 ILDGETAFRLYDTYGFPVDLTADVCRERNIKVDEDGFAVAMENQRRRAR 438
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 26/37 (70%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N + V+ + +G EA ++LDK+ FYAE GGQ+ D G +
Sbjct: 477 NGESVNQIQAGEEAIVILDKTAFYAESGGQVGDSGIL 513
>gi|13470354|ref|NP_101920.1| alanyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
gi|20532259|sp|Q98NQ5.1|SYA_RHILO RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|14021093|dbj|BAB47706.1| alanyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
Length = 888
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 74/154 (48%), Gaps = 27/154 (17%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+ + + + VDS G ++++++ FY E GGQ+ D G + G
Sbjct: 470 QALVKDGKTVDSAGKGDAVAVVVNQTPFYGESGGQMGDTGIISG---------------- 513
Query: 377 LEGSKYALPIFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNH 434
EG +S+ +KK V L S T++ G ++L +D ARR + +NH
Sbjct: 514 -EG--------FSIEISDTQKKADGLFVHLGKVASGTVKTGAAVELKVDHARRTRLRANH 564
Query: 435 TATHILNHALRFVLGPEADQKGSLVYRYHLHENI 468
+ATH+++ ALR VLG QKGSLV L +I
Sbjct: 565 SATHLIHEALREVLGTHVAQKGSLVAPERLRFDI 598
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 36/47 (76%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
+L G+ A++LYDTYGFP+DLTQ + ++ +SVD+ + +A ++ ++E
Sbjct: 382 MLDGETAFKLYDTYGFPLDLTQDALRQRNISVDLAGFTNAMEQQKAE 428
>gi|392556041|ref|ZP_10303178.1| alanyl-tRNA ligase [Pseudoalteromonas undina NCIMB 2128]
Length = 863
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 62/134 (46%), Gaps = 25/134 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V + G + I+LD++ FYAE GGQI D G + E
Sbjct: 469 VSLLEDGQQGIIVLDRTPFYAESGGQIGDSGTITVAGGE--------------------- 507
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
F+++N K T+ + V DK+ ID ARR I NHTATHIL+ ALR
Sbjct: 508 ----FNVTNTTKLGNAFAHHGTVQGRIGVNDKVDATIDDARRESIKKNHTATHILHEALR 563
Query: 446 FVLGPEADQKGSLV 459
+LG QKGSLV
Sbjct: 564 QLLGEHVSQKGSLV 577
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
V+PGD+ ++LYDTYGFP DLT + E+ +++D + +E A Q + QAG
Sbjct: 378 VIPGDLVFKLYDTYGFPADLTADVARERQMTIDHQGFE-ACMAVQRKTAQQAG 429
>gi|118602853|ref|YP_904068.1| alanyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|205830196|sp|A1AXE0.1|SYA_RUTMC RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|118567792|gb|ABL02597.1| alanyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 865
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 23/142 (16%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
+ N + V+ + +G ++L +S+FYAE GGQ+ D G + E +++
Sbjct: 463 ALVKNSKLVEEIKAGEYGIVVLAQSSFYAESGGQVGDSGVLSNAKIEFKVD--------- 513
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
+K +F + + N L+VGD ++ ++D R+ I NH+AT
Sbjct: 514 HTNKQKSGVFEHYGVLN--------------KGVLKVGDTIQANVDKKSRKCIARNHSAT 559
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H+L+ ALR VLG QKGSLV
Sbjct: 560 HLLHAALRIVLGETVTQKGSLV 581
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG----METS 69
+ G ++LYDTYGFP+DLT + E+ L++DM +E + Q + QAG + +
Sbjct: 382 IDGKTVFKLYDTYGFPIDLTADIARERHLTIDMLGFEFEMTR-QRDRARQAGDFKISKKN 440
Query: 70 VEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIV 102
V+ G T + + ISS A+ K S +V
Sbjct: 441 VDIIGVTEFLGYEQLEN--ISSILALVKNSKLV 471
Score = 39.7 bits (91), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 277 TVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
+++ L N + V+ + +G ++L +S+FYAE GGQ+ D G +SN +
Sbjct: 460 SILALVKNSKLVEEIKAGEYGIVVLAQSSFYAESGGQVGDSGVLSNAKI 508
>gi|388583424|gb|EIM23726.1| hypothetical protein WALSEDRAFT_31222 [Wallemia sebi CBS 633.66]
Length = 946
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 71/142 (50%), Gaps = 28/142 (19%)
Query: 322 NKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
++QF S +++ GILLDK+NFYAE GGQ YD G ++ ++
Sbjct: 506 DRQFHKSTKDINTSKPFGILLDKTNFYAESGGQEYDTG-----------------MITID 548
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTAT 437
G F++ +++ V L + L + D + D RR PI +NHT T
Sbjct: 549 GK-------ADFAVEDVQVYSGYVLHSGALKYGELNLNDDVIATYDELRRWPIKNNHTGT 601
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H+LN AL+ VLG DQKGSLV
Sbjct: 602 HLLNFALKEVLGDHIDQKGSLV 623
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ--SEPESQAGMETS 69
K L G WRLYDTYGFPVDLT LM EE GL+++ME +E A+ ++ S+ + G S
Sbjct: 407 KQLGGKEVWRLYDTYGFPVDLTVLMAEELGLTINMEEFEKARIESHEASKGTKKKGDVES 466
Query: 70 VEFCGGTHLAMAHHVGDFCISSEEAIAKGSNIVSYC 105
V+F V D ++ IAK +I Y
Sbjct: 467 VKF----------DVHDLAALEKDNIAKTDDIYKYT 492
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 275 EGTVVGLRYNKQFVDS---VSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
+ ++ + ++QF S +++ GILLDK+NFYAE GGQ YD G ++
Sbjct: 497 DAKIISIFQDRQFHKSTKDINTSKPFGILLDKTNFYAESGGQEYDTGMIT 546
>gi|166365301|ref|YP_001657574.1| alanyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
gi|205830148|sp|B0JI84.1|SYA_MICAN RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|166087674|dbj|BAG02382.1| alanyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
Length = 874
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+S ++GTE ++LD++ FYAE GGQI D+G++ G N L+ +E +
Sbjct: 475 VESAAAGTEVQVVLDRTPFYAESGGQIGDKGYLTGDN----------LLIRIEDVQKESG 524
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
IF+ F + ++ +V GD + ID + RR +NHTATH+L AL+
Sbjct: 525 IFIHFG----RIERGIVT----------TGDTINAQIDRSCRRRAQANHTATHLLQSALK 570
Query: 446 FVLGPEADQKGSLV 459
++ Q GSLV
Sbjct: 571 KLVDGGISQAGSLV 584
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+L++I + +S++ G A+ LYDTYGFP++LTQ + EE+GLSVD +E KK Q
Sbjct: 368 LLESILEKEKSQI-SGVDAFTLYDTYGFPLELTQEIAEEQGLSVDTAGFEQEMKKQQQ-- 424
Query: 61 ESQAGMETSVEFCGGTHLAMAHHV 84
S+A ET G+ +A H+
Sbjct: 425 RSKAAHETIDLTVQGSLDKLAEHI 448
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
V+S ++GTE ++LD++ FYAE GGQI D+G++ G N
Sbjct: 475 VESAAAGTEVQVVLDRTPFYAESGGQIGDKGYLTGDN 511
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS-GTE 334
TV + + V+S ++GTE ++LD++ FYAE GGQI D+G+++ + + E
Sbjct: 463 ATVTAVLVAGKTVESAAAGTEVQVVLDRTPFYAESGGQIGDKGYLTGDNLLIRIEDVQKE 522
Query: 335 AGILL 339
+GI +
Sbjct: 523 SGIFI 527
>gi|392410882|ref|YP_006447489.1| alanyl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
gi|390624018|gb|AFM25225.1| alanyl-tRNA synthetase [Desulfomonile tiedjei DSM 6799]
Length = 875
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V G I+ +++ FY E GGQ+ D G + V+D +Q ++ ++
Sbjct: 482 VQEAGPGEHVEIIAERTPFYGESGGQVGDHGTI--VSDAAQFDVMDTTR----------- 528
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
NL K LV S T++VGD+ L ++T RR IM+NH+ATH+L ALR
Sbjct: 529 -----PFPNLIVHKGLVT-----SGTVKVGDRTTLKVNTGMRRSIMANHSATHLLQWALR 578
Query: 446 FVLGPEADQKGSLV 459
VLG Q GSLV
Sbjct: 579 EVLGDHVKQSGSLV 592
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 9 GESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMET 68
G S+VL G VA+RLYDT+GFP DLT + +E GL+VD + D + Q E Q
Sbjct: 382 GSSRVLSGQVAFRLYDTFGFPPDLTGDLAKEAGLTVDQAGF-DTEMTKQREMARQ----- 435
Query: 69 SVEFCGGTHLAMAHHVGDFCISSE 92
S E G LA + + I++E
Sbjct: 436 SWEGMAGEDLAALREILEEGITTE 459
>gi|359445603|ref|ZP_09235327.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20439]
gi|358040562|dbj|GAA71576.1| alanyl-tRNA synthetase [Pseudoalteromonas sp. BSi20439]
Length = 866
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 62/134 (46%), Gaps = 25/134 (18%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V + G + I+LD++ FYAE GGQI D G + E
Sbjct: 472 VSLLEDGQQGIIVLDRTPFYAESGGQIGDSGTITVAGGE--------------------- 510
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
F+++N K T+ + V DK+ ID ARR I NHTATHIL+ ALR
Sbjct: 511 ----FNVTNTTKLGNAFAHHGTVQGRIGVNDKVDATIDDARRESIKKNHTATHILHEALR 566
Query: 446 FVLGPEADQKGSLV 459
+LG QKGSLV
Sbjct: 567 QLLGEHVSQKGSLV 580
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
V+PGD+ ++LYDTYGFP DLT + E+ +++D + +E A Q + QAG
Sbjct: 381 VIPGDLVFKLYDTYGFPADLTADVARERQMTIDHQGFE-ACMAVQRKTAQQAG 432
>gi|387824680|ref|YP_005824151.1| alanyl-tRNA synthetase [Francisella cf. novicida 3523]
gi|332184146|gb|AEE26400.1| Alanyl-tRNA synthetase [Francisella cf. novicida 3523]
Length = 865
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 74/144 (51%), Gaps = 24/144 (16%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
+ Q VDS++ A ++LDK+ FYAE GGQ+ D+G + GV E +E +++ S
Sbjct: 466 DSQLVDSITEEASAVVVLDKTPFYAESGGQVGDKGVLEGVGFEFIVE-------DVQKSG 518
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
A+ L KLVK L V D+L + R +NH+ATH+L+
Sbjct: 519 EAI---LHIG--------KLVK------GRLNVNDELTAQVSDQPRLATAANHSATHLLH 561
Query: 442 HALRFVLGPEADQKGSLVYRYHLH 465
AL+ +LG A+QKGSLV L
Sbjct: 562 KALKVILGSHAEQKGSLVDENRLR 585
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+ G+VA++LYDTYGFP DLT M EKGL VD +V+ A+ + Q + +AG
Sbjct: 380 VSGEVAFKLYDTYGFPFDLTADMAREKGLKVDEQVFL-AQMQVQKQRSKEAG 430
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 226 KRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGV 272
K L ++ Q VDS++ A ++LDK+ FYAE GGQ+ D+G + GV
Sbjct: 459 KVLEIYHDSQLVDSITEEASAVVVLDKTPFYAESGGQVGDKGVLEGV 505
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 274 DEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF---VDSVS 330
++ V+ + ++ Q VDS++ A ++LDK+ FYAE GGQ+ D+G + F V+ V
Sbjct: 456 EDAKVLEIYHDSQLVDSITEEASAVVVLDKTPFYAESGGQVGDKGVLEGVGFEFIVEDVQ 515
Query: 331 SGTEAGILLDK-----SNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
EA + + K N E Q+ D+ + + S L +L + GS
Sbjct: 516 KSGEAILHIGKLVKGRLNVNDELTAQVSDQPRLATAANHSATHLLHKALKVILGS 570
>gi|332305691|ref|YP_004433542.1| alanyl-tRNA synthetase [Glaciecola sp. 4H-3-7+YE-5]
gi|410642570|ref|ZP_11353080.1| alanyl-tRNA synthetase [Glaciecola chathamensis S18K6]
gi|332173020|gb|AEE22274.1| alanyl-tRNA synthetase [Glaciecola sp. 4H-3-7+YE-5]
gi|410137867|dbj|GAC11267.1| alanyl-tRNA synthetase [Glaciecola chathamensis S18K6]
Length = 865
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 71/148 (47%), Gaps = 37/148 (25%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q V +++G E I+LD+S FYAE GGQ D G + V D E+
Sbjct: 469 QSVAEIAAGMEGTIILDESPFYAEAGGQAGDTGTL--VKDSGGFEV-------------- 512
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHT------LRVGDKLKLHIDTARRRPIMSNHTAT 437
+ VKL ++H L+VGD ++ +++ ARR I NH+AT
Sbjct: 513 ---------------QDTVKLGKAIAHKGAALSELKVGDSVQANVNGARRHAIKLNHSAT 557
Query: 438 HILNHALRFVLGPEADQKGSLVYRYHLH 465
H+++ AL+ VLG +QKGSLV L
Sbjct: 558 HLMHAALKSVLGEHVNQKGSLVQPERLR 585
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 38/52 (73%), Gaps = 4/52 (7%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA----KKKAQ 57
E KV+PG++ ++LYDTYGFP DLT + EKGLS+D E +E A +K+AQ
Sbjct: 377 EGKVVPGELVFKLYDTYGFPADLTNDVAREKGLSIDEEGFEQAMAEQRKRAQ 428
>gi|311105349|ref|YP_003978202.1| alanyl-tRNA synthetase [Achromobacter xylosoxidans A8]
gi|310760038|gb|ADP15487.1| alanyl-tRNA synthetase [Achromobacter xylosoxidans A8]
Length = 874
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 65/134 (48%), Gaps = 23/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V V +G A ++LD + FYAE GGQ+ D G L+ +G ++A+
Sbjct: 477 VQQVKAGQSAVVVLDATPFYAESGGQVGDTG-----------------LLEADGVRFAVA 519
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
L+ +L S TL VGD L +D RR + NH+ATH+++ ALR
Sbjct: 520 DTLKIQAGVFGHHGELE------SGTLSVGDTLLARVDAVRRARTVRNHSATHLMHKALR 573
Query: 446 FVLGPEADQKGSLV 459
VLG Q+GSLV
Sbjct: 574 QVLGAHVQQRGSLV 587
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 4 TIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+A + + L G + LYDTYGFPVDLT + E+ L VDM +E A ++ + + +
Sbjct: 377 ALANVPKGGQLDGMTLFTLYDTYGFPVDLTADICRERELDVDMAGFEVAMERQRDQARA 435
>gi|308233742|ref|ZP_07664479.1| alanyl-tRNA synthetase [Atopobium vaginae DSM 15829]
gi|328943732|ref|ZP_08241197.1| alanine--tRNA ligase [Atopobium vaginae DSM 15829]
gi|327491701|gb|EGF23475.1| alanine--tRNA ligase [Atopobium vaginae DSM 15829]
Length = 882
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 67/134 (50%), Gaps = 23/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD V + T ++LD + FY E+GGQ+ D G++ ++ES ++L + ++ EG +
Sbjct: 481 VDKVQANTRVEVVLDATPFYGERGGQVGDTGYL---SNES-VKLRVENTLHREGELLSHE 536
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
L+ TL VGD L ID RR I NHTATH+L+ AL
Sbjct: 537 CVLE-------------------QGTLAVGDTLNCAIDVHRRECIRRNHTATHLLDAALI 577
Query: 446 FVLGPEADQKGSLV 459
VLG Q GSLV
Sbjct: 578 KVLGDHVSQAGSLV 591
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 5 IAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
+A L VLPG+VA++L+DTYGFP+DLT+ + G VDM+ +E + +S +QA
Sbjct: 375 LAHLDAGSVLPGEVAFKLHDTYGFPIDLTREIALGLGHDVDMDTFEKLMEDQRSRARAQA 434
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 274 DEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
D VV L + VD V + T ++LD + FY E+GGQ+ D G++SN+
Sbjct: 467 DGAHVVALVVDGASVDKVQANTRVEVVLDATPFYGERGGQVGDTGYLSNE 516
>gi|167758103|ref|ZP_02430230.1| hypothetical protein CLOSCI_00441 [Clostridium scindens ATCC 35704]
gi|167664000|gb|EDS08130.1| alanine--tRNA ligase [Clostridium scindens ATCC 35704]
Length = 879
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 68/139 (48%), Gaps = 23/139 (16%)
Query: 321 SNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGS 380
++ + VD++S G I ++K+ FYA GGQ D+G + + E +E +V L G
Sbjct: 476 TDTELVDALSDGERGTIFVEKTPFYATSGGQEADKGIIRTADGEFIVE----DVVKLMGG 531
Query: 381 KYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
K+ + H ++VGDK L +DT R +NH+ATH+L
Sbjct: 532 KFG-------------------HIGHVSKGMIKVGDKAALEVDTDNRMLSANNHSATHLL 572
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR VLG +Q GS V
Sbjct: 573 HKALRMVLGNHVEQAGSSV 591
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA 52
M+ K GE K L G A++LYDTYGFP+DLT+ ++EEKG+SVD + +++A
Sbjct: 373 MVAETEKKGE-KTLDGQNAFKLYDTYGFPLDLTKEILEEKGMSVDEKGFKEA 423
>gi|406938858|gb|EKD71999.1| Alanyl-tRNA synthetase [uncultured bacterium]
Length = 384
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 71/134 (52%), Gaps = 23/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
+D ++ G + I+LD+S FYAE GGQ+ D+G + N + +F L ++
Sbjct: 1 MDVLNVGEKGSIVLDRSPFYAESGGQVGDQGVLHIEN-----KAFFKVLDTIKQG----- 50
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
+ L L+K TLR+G+++ +D RR I+ NHTATH+L+ L+
Sbjct: 51 -HMHLHLGKLEKG------------TLRIGEEVHPEVDVNRRAAIVLNHTATHLLHLVLK 97
Query: 446 FVLGPEADQKGSLV 459
VLG A QKGSLV
Sbjct: 98 QVLGEHAIQKGSLV 111
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 5/50 (10%)
Query: 288 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM--SNKQF---VDSVSSG 332
+D ++ G + I+LD+S FYAE GGQ+ D+G + NK F +D++ G
Sbjct: 1 MDVLNVGEKGSIVLDRSPFYAESGGQVGDQGVLHIENKAFFKVLDTIKQG 50
>gi|453064638|gb|EMF05602.1| alanyl-tRNA ligase [Serratia marcescens VGH107]
Length = 875
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 24/142 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q V+ +++G EA ++LD++ FY E GGQ+ D+G + E V + KY
Sbjct: 478 QPVEQINAGEEAVVVLDETPFYGESGGQVGDKGVLKAAGAE---------FVVNDTQKYG 528
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
I Q L+ +L++ D++ ID RR I NH+ATH+L+ A
Sbjct: 529 QAIGHQGKLAQ---------------GSLKLNDRVDAQIDAERRNSIRLNHSATHLLHAA 573
Query: 444 LRFVLGPEADQKGSLVYRYHLH 465
LR LG QKGSLV +L
Sbjct: 574 LRQTLGDHVAQKGSLVNDKYLR 595
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+GL VD +E+A + +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERGLKVDEAGFEEAMEAQRRRARE 438
Query: 63 QAG 65
+G
Sbjct: 439 SSG 441
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
+ TV+ L + Q V+ +++G EA ++LD++ FY E GGQ+ D+G +
Sbjct: 467 QATVIALFRDGQPVEQINAGEEAVVVLDETPFYGESGGQVGDKGVL 512
>gi|448240598|ref|YP_007404651.1| alanyl-tRNA synthetase [Serratia marcescens WW4]
gi|445210962|gb|AGE16632.1| alanyl-tRNA synthetase [Serratia marcescens WW4]
Length = 875
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 69/142 (48%), Gaps = 24/142 (16%)
Query: 324 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYA 383
Q V+ +++G EA ++LD++ FY E GGQ+ D+G + E V + KY
Sbjct: 478 QPVEQINAGEEAVVVLDETPFYGESGGQVGDKGVLKAAGAE---------FVVNDTQKYG 528
Query: 384 LPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
I Q L+ +L++ D++ ID RR I NH+ATH+L+ A
Sbjct: 529 QAIGHQGKLAQ---------------GSLKLNDRVDAQIDAERRNSIRLNHSATHLLHAA 573
Query: 444 LRFVLGPEADQKGSLVYRYHLH 465
LR LG QKGSLV +L
Sbjct: 574 LRQTLGDHVAQKGSLVNDKYLR 595
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+ +AKL + L G+ A+RLYDTYGFPVDLT + E+GL VD +E+A + +
Sbjct: 380 EELAKL-QGDTLDGETAFRLYDTYGFPVDLTADVCRERGLKVDEAGFEEAMEAQRRRARE 438
Query: 63 QAGMET 68
+G T
Sbjct: 439 SSGFGT 444
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
+ TV+ L + Q V+ +++G EA ++LD++ FY E GGQ+ D+G +
Sbjct: 467 QATVIALFRDGQPVEQINAGEEAVVVLDETPFYGESGGQVGDKGVL 512
>gi|332296601|ref|YP_004438524.1| alanyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
gi|332179704|gb|AEE15393.1| alanyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
Length = 854
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 106/248 (42%), Gaps = 42/248 (16%)
Query: 238 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGL-------RYNKQFVDS 290
D + SG A +L D F E ++ E F IGV+ EG L R QFVD
Sbjct: 374 DGIISGEIAFLLYDTYGFPVELTKEMAAE-FNIGVDIEGFNELLMQRKNLSRQGSQFVDE 432
Query: 291 VSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGG 350
+ + + + N + +I G N V S+ +G E I+L+K+ FY E GG
Sbjct: 433 IITTSFTSEFVGYDNL--KTNSKIL--GIYKNNNEVRSLLAGEEGYIILNKTPFYPESGG 488
Query: 351 QIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTL-S 409
Q+ D G+++ N F +++++++K + + S
Sbjct: 489 QVSDIGYIVSENS-------------------------TFRVTSVQREKDAIFHFGKVES 523
Query: 410 HTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV----YRYHLH 465
+ GD ++ ID RRR SNHT THIL+ LR G QKGS V R+
Sbjct: 524 GSFCAGDYVEAEIDIKRRRLSSSNHTCTHILHAVLREKFGETVKQKGSFVSDELLRFDFF 583
Query: 466 ENIMECEE 473
N + E+
Sbjct: 584 SNALSDED 591
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 32/45 (71%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDME 47
+ + ++ + ++ G++A+ LYDTYGFPV+LT+ M E + VD+E
Sbjct: 366 KLMPQIKKDGIISGEIAFLLYDTYGFPVELTKEMAAEFNIGVDIE 410
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFV 288
N V S+ +G E I+L+K+ FY E GGQ+ D G+++ N V ++ K +
Sbjct: 460 NNNEVRSLLAGEEGYIILNKTPFYPESGGQVSDIGYIVSENSTFRVTSVQREKDAI 515
>gi|158424478|ref|YP_001525770.1| alanyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
gi|205829980|sp|A8ICW8.1|SYA_AZOC5 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|158331367|dbj|BAF88852.1| alanyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
Length = 881
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 68/138 (49%), Gaps = 31/138 (22%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V + +G ++L+++ FY E GGQ+ D G LV+ EG K +
Sbjct: 478 VSELPAGARGFVVLNQTPFYGESGGQVGDSG-----------------LVSGEGVKACV- 519
Query: 386 IFLQFSLSNLKKKKKL----VKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILN 441
L +KKL V + TL++G L L +D ARR + +NH+ATH+L+
Sbjct: 520 ---------LNTQKKLGDVFVHDVEVTEGTLKIGTPLALEVDHARRSAVRANHSATHLLH 570
Query: 442 HALRFVLGPEADQKGSLV 459
ALR VLG QKGSLV
Sbjct: 571 EALRRVLGDHVAQKGSLV 588
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 36/50 (72%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQ 63
PG+VA++LYDTYGFP+DLT+ + +G+ V+ E ++ A ++ ++E +
Sbjct: 382 FPGEVAFKLYDTYGFPLDLTEDALRGRGIEVEREAFDAAMERQKAEARAN 431
>gi|420559346|ref|ZP_15055848.1| alanine--tRNA ligase [Yersinia pestis PY-03]
gi|420618471|ref|ZP_15108980.1| alanine--tRNA ligase [Yersinia pestis PY-14]
gi|420633972|ref|ZP_15122958.1| alanine--tRNA ligase [Yersinia pestis PY-19]
gi|420661084|ref|ZP_15147410.1| alanine--tRNA ligase [Yersinia pestis PY-36]
gi|420666364|ref|ZP_15152164.1| alanine--tRNA ligase [Yersinia pestis PY-42]
gi|420687533|ref|ZP_15171279.1| alanine--tRNA ligase [Yersinia pestis PY-48]
gi|420704379|ref|ZP_15185583.1| alanine--tRNA ligase [Yersinia pestis PY-54]
gi|420709711|ref|ZP_15190332.1| alanine--tRNA ligase [Yersinia pestis PY-55]
gi|420747959|ref|ZP_15224036.1| alanine--tRNA ligase [Yersinia pestis PY-64]
gi|420759186|ref|ZP_15233543.1| alanine--tRNA ligase [Yersinia pestis PY-66]
gi|420812322|ref|ZP_15281012.1| alanine--tRNA ligase [Yersinia pestis PY-94]
gi|420817822|ref|ZP_15285987.1| alanine--tRNA ligase [Yersinia pestis PY-95]
gi|420838756|ref|ZP_15304839.1| alanine--tRNA ligase [Yersinia pestis PY-100]
gi|420855287|ref|ZP_15319435.1| alanine--tRNA ligase [Yersinia pestis PY-103]
gi|391423352|gb|EIQ85844.1| alanine--tRNA ligase [Yersinia pestis PY-03]
gi|391488377|gb|EIR44231.1| alanine--tRNA ligase [Yersinia pestis PY-14]
gi|391502958|gb|EIR57202.1| alanine--tRNA ligase [Yersinia pestis PY-19]
gi|391533180|gb|EIR84486.1| alanine--tRNA ligase [Yersinia pestis PY-36]
gi|391536182|gb|EIR87194.1| alanine--tRNA ligase [Yersinia pestis PY-42]
gi|391552212|gb|EIS01657.1| alanine--tRNA ligase [Yersinia pestis PY-48]
gi|391571986|gb|EIS19272.1| alanine--tRNA ligase [Yersinia pestis PY-54]
gi|391580999|gb|EIS26929.1| alanine--tRNA ligase [Yersinia pestis PY-55]
gi|391614331|gb|EIS56210.1| alanine--tRNA ligase [Yersinia pestis PY-64]
gi|391628640|gb|EIS68679.1| alanine--tRNA ligase [Yersinia pestis PY-66]
gi|391678068|gb|EIT12320.1| alanine--tRNA ligase [Yersinia pestis PY-94]
gi|391690984|gb|EIT23955.1| alanine--tRNA ligase [Yersinia pestis PY-95]
gi|391711014|gb|EIT42014.1| alanine--tRNA ligase [Yersinia pestis PY-100]
gi|391724581|gb|EIT54145.1| alanine--tRNA ligase [Yersinia pestis PY-103]
Length = 783
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N + VD + +G EA ++L+++ FY E GGQ+ D+G L N
Sbjct: 380 ALFRNGEAVDEIHAGEEAVVVLNRTPFYGESGGQVGDKG----------------ELKNA 423
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+ FS+++ +K + + + L+ TLRV ++ +D RR I NH+A
Sbjct: 424 TAT---------FSVTDTQKYGQAIGHVGILTTGTLRVNHSVEALVDVVRRNRIRLNHSA 474
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR VLG QKGSLV +L
Sbjct: 475 THLLHAALRNVLGEHVAQKGSLVNDKYLR 503
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG-------- 65
L G+ A+RLYDTYGFPVDLT + E+ L VD +E A + + +G
Sbjct: 298 LDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSGFGADYNSL 357
Query: 66 --METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGSIND- 120
++++ +F G H+ V + E + I G V + G + D
Sbjct: 358 IRVDSASQFSGYDHVQQHATVTALFRNGEAVDEIHAGEEAVVVLNRTPFYGESGGQVGDK 417
Query: 121 -EMVNKYPSLYRLFRTVHKQKYVQDALNVSCLS 152
E+ N + F QKY Q +V L+
Sbjct: 418 GELKNATAT----FSVTDTQKYGQAIGHVGILT 446
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS 331
V TV L N + VD + +G EA ++L+++ FY E GGQ+ D+G + N SV+
Sbjct: 372 VQQHATVTALFRNGEAVDEIHAGEEAVVVLNRTPFYGESGGQVGDKGELKNATATFSVTD 431
Query: 332 GTEAG 336
+ G
Sbjct: 432 TQKYG 436
>gi|352517547|ref|YP_004886864.1| alanyl-tRNA synthetase [Tetragenococcus halophilus NBRC 12172]
gi|348601654|dbj|BAK94700.1| alanyl-tRNA synthetase [Tetragenococcus halophilus NBRC 12172]
Length = 882
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 75/149 (50%), Gaps = 27/149 (18%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ N +FVD V+ G +A ++ ++ FYAE GGQ+ D G +I E
Sbjct: 476 LLQNDKFVDDVNDG-QAEVIFSQTPFYAEMGGQVADTGVIIDQTGE-------------- 520
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTL--SHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+ ++ +++K K + LH + L+ G + L +D R I+ NHTA
Sbjct: 521 ---------ICATVRDVQKAPK-GQYLHQIEVKKDLQKGQEYTLQVDKDRHNRIIKNHTA 570
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ AL+ VLG +++Q GSLV HL
Sbjct: 571 THLLHKALKEVLGSQSNQAGSLVAPDHLR 599
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 7/60 (11%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD-------MEVYEDAKKKAQSEPES 62
++K++ G ++LYDTYGFPV+LT+ + EE G VD ME + A+S+ +S
Sbjct: 385 QTKMISGSDIFKLYDTYGFPVELTEEIAEESGFGVDHTGFEREMEAQRQRARNARSKEQS 444
>gi|373110940|ref|ZP_09525202.1| alanyl-tRNA synthetase [Myroides odoratimimus CCUG 10230]
gi|371641816|gb|EHO07396.1| alanyl-tRNA synthetase [Myroides odoratimimus CCUG 10230]
Length = 875
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 28/154 (18%)
Query: 313 QIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFS 372
Q+ +E ++ + +DS G I+LD + FY E GGQ+ D G ++ ND Q+
Sbjct: 472 QLENEVKITRYRKIDSKKDGKLFQIVLDSTPFYPEGGGQVGDTGILVSANDTIQV----- 526
Query: 373 SLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIM 431
+ KK+ L+ LH + V L +D R+ M
Sbjct: 527 --------------------IDTKKENNLI--LHIVRELPANVEGTLVAKVDVEARKQSM 564
Query: 432 SNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
+NH+ATH+L+ ALR +LG +QKGSLV HL
Sbjct: 565 ANHSATHLLHQALRTILGTHVEQKGSLVAPTHLR 598
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+L + K E KV+ G A+ LYDT+GFP+DLT L++ EKG +D ++ A + +
Sbjct: 386 LLDNVIKQTEGKVVSGVKAFELYDTFGFPIDLTALILREKGYELDEAGFDAA--MLEQKT 443
Query: 61 ESQAGMETSVE 71
S+A E S +
Sbjct: 444 RSRAASEVSTD 454
>gi|434403586|ref|YP_007146471.1| alanyl-tRNA synthetase [Cylindrospermum stagnale PCC 7417]
gi|428257841|gb|AFZ23791.1| alanyl-tRNA synthetase [Cylindrospermum stagnale PCC 7417]
Length = 880
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 24/133 (18%)
Query: 327 DSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPI 386
++ +GTE I+L+ + FYAE GGQI D G++ G LV +E K
Sbjct: 483 EAAEAGTEVQIVLNTTPFYAESGGQIGDRGYISGDG----------ILVRVEDVKKESDF 532
Query: 387 FLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRF 446
F+ F TLRVGD + ID+A RR +NHTATH+L AL+
Sbjct: 533 FVHFG--------------RIERGTLRVGDTVTAQIDSACRRRAQANHTATHLLQAALKK 578
Query: 447 VLGPEADQKGSLV 459
++ Q GSLV
Sbjct: 579 IVDNGISQAGSLV 591
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 58/126 (46%), Gaps = 21/126 (16%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMET----- 68
+ G+ A+ LYDTYGFP++LTQ + EE L+VD EV +A+ + Q E ++A ET
Sbjct: 387 ISGESAFTLYDTYGFPLELTQEIAEENHLTVD-EVGFNAEMQKQVE-RAKAAHETIDLTV 444
Query: 69 ------------SVEFCGGTHLAMAHHVGDFCIS--SEEAIAKGSNIVSYCGSKGTFQSH 114
S EF G T A V + S+EA G+ + + +
Sbjct: 445 QGSLDKLAEHIHSTEFIGYTQAAATAKVEVLLVGGVSQEAAEAGTEVQIVLNTTPFYAES 504
Query: 115 SGSIND 120
G I D
Sbjct: 505 GGQIGD 510
>gi|350271041|ref|YP_004882349.1| alanyl-tRNA synthetase [Oscillibacter valericigenes Sjm18-20]
gi|348595883|dbj|BAK99843.1| alanyl-tRNA synthetase [Oscillibacter valericigenes Sjm18-20]
Length = 883
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 114/244 (46%), Gaps = 42/244 (17%)
Query: 230 FSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM----IGVND--EGTVVGLRY 283
+ +K+ ++V SG +A L D F + ++ +E M G +D E V R
Sbjct: 376 LATHKEKRETVFSGADAFKLYDTYGFPIDLTVEMLEEEEMSVDKAGFDDLMEQQRVRARK 435
Query: 284 NKQFVDSVS-SGTEAGILLDKSNF----YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGIL 338
++ + V+ +G + G+ + F + E G++ + +++ D++ G E I+
Sbjct: 436 AREALGDVAWAGIDLGLDATPTVFTGYDHNEDEGKVL--AIVVDEELRDAMVKGAEGIIV 493
Query: 339 LDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKK 398
LD++ FYAE GGQ+ D G ++ L+G+ +A+ N +K
Sbjct: 494 LDRTPFYAEMGGQVADHGKIL-----------------LDGAAFAV---------NNVQK 527
Query: 399 KKLVKLLH---TLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQK 455
K K LH S +R GD + ID RR+ I H+ATH+L+ L+ +LG Q
Sbjct: 528 DKAGKFLHHGVMESGEIRTGDTVAAVIDANRRQAIRRAHSATHLLDAVLQKILGDHVHQA 587
Query: 456 GSLV 459
GSLV
Sbjct: 588 GSLV 591
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED 51
ML T + E+ V G A++LYDTYGFP+DLT M+EE+ +SVD ++D
Sbjct: 375 MLATHKEKRET-VFSGADAFKLYDTYGFPIDLTVEMLEEEEMSVDKAGFDD 424
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 43/98 (43%), Gaps = 3/98 (3%)
Query: 27 GFPVDLTQLMVEE-KGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGTHLAMAHHVG 85
G P+ +L +EE K L E K + + S+EFCGGTHL VG
Sbjct: 625 GLPIVTQELPIEEAKKLGATALFGEKYGKTVRVVSMGEGEKLASMEFCGGTHLDNTAKVG 684
Query: 86 DFCISSEEAIAKGSNIVSYCGSKGTFQSHSGSINDEMV 123
F I SE ++A G + K + + + N EM+
Sbjct: 685 PFRIKSEASVASGVRRIEATVGKASLEVM--NCNQEML 720
>gi|225620397|ref|YP_002721654.1| alanyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
gi|225215216|gb|ACN83950.1| alanyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
Length = 867
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 64/136 (47%), Gaps = 23/136 (16%)
Query: 330 SSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQ 389
+S + A I+ D S FY E GGQI D G+ +E SK + +
Sbjct: 477 TSSSNAVIITDVSPFYGEMGGQIGDNGY-------------------IENSKKEIIKIID 517
Query: 390 FSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLG 449
KK+ ++ + SH+L VG+++KL ++ RR I NHTATHIL L LG
Sbjct: 518 TQ----KKENTIIHIADCSSHSLSVGEEIKLFVNFDRRSAIRKNHTATHILQKVLELTLG 573
Query: 450 PEADQKGSLVYRYHLH 465
+Q GS V +L
Sbjct: 574 NHVNQAGSFVSDEYLR 589
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 4/58 (6%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDM----EVYEDAKKKAQSEPESQ 63
+SKV+ G A+ L+DTYG P+D+T+ + G +VD E E+ KK+++ E +
Sbjct: 377 DSKVISGKDAFMLFDTYGLPIDITEEEASDHGFTVDKAGFEEAMEEQKKRSRGAGEDK 434
>gi|336421603|ref|ZP_08601759.1| hypothetical protein HMPREF0993_01136, partial [Lachnospiraceae
bacterium 5_1_57FAA]
gi|336000074|gb|EGN30227.1| hypothetical protein HMPREF0993_01136 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 530
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 69/147 (46%), Gaps = 23/147 (15%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
++ + VD++S G I ++K+ FYA GGQ D+G + + E +E +V L
Sbjct: 125 LATDTELVDALSDGERGTIFVEKTPFYATSGGQEADKGIIRTADGEFIVE----DVVKLM 180
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G K+ + H ++VGDK L +DT R +NH+ATH
Sbjct: 181 GGKFG-------------------HIGHVSKGMIKVGDKAALEVDTDNRMLSANNHSATH 221
Query: 439 ILNHALRFVLGPEADQKGSLVYRYHLH 465
+L+ ALR VLG +Q GS V L
Sbjct: 222 LLHKALRMVLGNHVEQAGSSVNADRLR 248
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA 52
M+ K GE K L G A++LYDTYGFP+DLT+ ++EEKG+SVD + +++A
Sbjct: 24 MVAETEKKGE-KTLDGQNAFKLYDTYGFPLDLTKEILEEKGMSVDEKGFKEA 74
>gi|395777980|ref|ZP_10458493.1| alanyl-tRNA synthetase [Bartonella elizabethae Re6043vi]
gi|423715906|ref|ZP_17690127.1| alanyl-tRNA synthetase [Bartonella elizabethae F9251]
gi|395418289|gb|EJF84616.1| alanyl-tRNA synthetase [Bartonella elizabethae Re6043vi]
gi|395429208|gb|EJF95282.1| alanyl-tRNA synthetase [Bartonella elizabethae F9251]
Length = 890
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 23/142 (16%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
+ + + VD VSSG +A ++L+++ FY E GGQI D G + N+ E++
Sbjct: 471 ALVRDGKIVDEVSSGQKAILVLNQTPFYGESGGQIGDSGII--SNEGFIFEVY------- 521
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
+ K A +F+ VK H ++ D ++L +D RR+ I +NH+AT
Sbjct: 522 DTQKRADGVFIHLGE---------VKSGHA-----KISDCVELTVDGVRRKKIRANHSAT 567
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H+L+ ALR +LG QKGSLV
Sbjct: 568 HLLHQALRQILGSHVTQKGSLV 589
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 42/58 (72%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQ 63
AKL E L GDVA++LYDTYGFP+DLTQ ++ +G+SVD++ ++ A ++ + E +
Sbjct: 375 AKLKEGDHLKGDVAFKLYDTYGFPLDLTQDVLRRRGISVDVDAFDKAMERQKEEARAH 432
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 35/52 (67%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFV 326
+G + L + + VD VSSG +A ++L+++ FY E GGQI D G +SN+ F+
Sbjct: 466 KGILTALVRDGKIVDEVSSGQKAILVLNQTPFYGESGGQIGDSGIISNEGFI 517
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVDSV 291
+ VD VSSG +A ++L+++ FY E GGQI D G +++EG + + ++ D V
Sbjct: 477 KIVDEVSSGQKAILVLNQTPFYGESGGQIGDSGI---ISNEGFIFEVYDTQKRADGV 530
>gi|444331355|ref|ZP_21148856.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
gi|443552545|gb|ELT59845.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
Length = 826
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 32/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++S+G A ++LD + FYAE GGQI D G LEG+ +
Sbjct: 431 VDTISAGQSAVVILDNTPFYAESGGQIGDIG-------------------RLEGNGF--- 468
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F + + +K ++ + L+ +L VG + +D RR+ I NH+ATH+L+ AL
Sbjct: 469 ---NFDVKDTQKYGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQHISLNHSATHLLHAAL 525
Query: 445 RFVLGPEADQKGSLV------YRYHLHENIMECE 472
R VLG QKGSLV + + HE I + +
Sbjct: 526 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQ 559
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGME 67
KVL G+VA++LYDTYGFP+DLT + E+G+++D +E ++ +++ SQ GM+
Sbjct: 339 KVLSGEVAFKLYDTYGFPLDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGMD 396
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
V L ++ + VD++S+G A ++LD + FYAE GGQI D G + F
Sbjct: 421 VTALFHDGKPVDTISAGQSAVVILDNTPFYAESGGQIGDIGRLEGNGF 468
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 219 TKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
T+ K ++ + VD++S+G A ++LD + FYAE GGQI D G + G
Sbjct: 413 TESETLAKVTALFHDGKPVDTISAGQSAVVILDNTPFYAESGGQIGDIGRLEG 465
>gi|294505017|ref|YP_003569079.1| alanyl-tRNA synthetase [Yersinia pestis Z176003]
gi|384123484|ref|YP_005506104.1| alanyl-tRNA synthetase [Yersinia pestis D106004]
gi|384127342|ref|YP_005509956.1| alanyl-tRNA synthetase [Yersinia pestis D182038]
gi|420564733|ref|ZP_15060685.1| alanine--tRNA ligase [Yersinia pestis PY-04]
gi|420586107|ref|ZP_15080071.1| alanine--tRNA ligase [Yersinia pestis PY-08]
gi|420591218|ref|ZP_15084666.1| alanine--tRNA ligase [Yersinia pestis PY-09]
gi|420596625|ref|ZP_15089530.1| alanine--tRNA ligase [Yersinia pestis PY-10]
gi|420602285|ref|ZP_15094563.1| alanine--tRNA ligase [Yersinia pestis PY-11]
gi|420613080|ref|ZP_15104285.1| alanine--tRNA ligase [Yersinia pestis PY-13]
gi|420628847|ref|ZP_15118367.1| alanine--tRNA ligase [Yersinia pestis PY-16]
gi|420676571|ref|ZP_15161457.1| alanine--tRNA ligase [Yersinia pestis PY-46]
gi|420698525|ref|ZP_15180938.1| alanine--tRNA ligase [Yersinia pestis PY-53]
gi|420726153|ref|ZP_15204721.1| alanine--tRNA ligase [Yersinia pestis PY-59]
gi|420736752|ref|ZP_15214272.1| alanine--tRNA ligase [Yersinia pestis PY-61]
gi|420753384|ref|ZP_15228883.1| alanine--tRNA ligase [Yersinia pestis PY-65]
gi|420774651|ref|ZP_15247367.1| alanine--tRNA ligase [Yersinia pestis PY-76]
gi|420780285|ref|ZP_15252327.1| alanine--tRNA ligase [Yersinia pestis PY-88]
gi|420860476|ref|ZP_15324010.1| alanine--tRNA ligase [Yersinia pestis PY-113]
gi|262363080|gb|ACY59801.1| alanyl-tRNA synthetase [Yersinia pestis D106004]
gi|262367006|gb|ACY63563.1| alanyl-tRNA synthetase [Yersinia pestis D182038]
gi|294355476|gb|ADE65817.1| alanyl-tRNA synthetase [Yersinia pestis Z176003]
gi|391437970|gb|EIQ98774.1| alanine--tRNA ligase [Yersinia pestis PY-04]
gi|391455733|gb|EIR14827.1| alanine--tRNA ligase [Yersinia pestis PY-08]
gi|391457722|gb|EIR16643.1| alanine--tRNA ligase [Yersinia pestis PY-09]
gi|391470749|gb|EIR28390.1| alanine--tRNA ligase [Yersinia pestis PY-10]
gi|391472001|gb|EIR29507.1| alanine--tRNA ligase [Yersinia pestis PY-11]
gi|391486791|gb|EIR42794.1| alanine--tRNA ligase [Yersinia pestis PY-13]
gi|391502738|gb|EIR57001.1| alanine--tRNA ligase [Yersinia pestis PY-16]
gi|391551643|gb|EIS01136.1| alanine--tRNA ligase [Yersinia pestis PY-46]
gi|391567717|gb|EIS15549.1| alanine--tRNA ligase [Yersinia pestis PY-53]
gi|391597724|gb|EIS41522.1| alanine--tRNA ligase [Yersinia pestis PY-59]
gi|391611023|gb|EIS53242.1| alanine--tRNA ligase [Yersinia pestis PY-61]
gi|391624262|gb|EIS64924.1| alanine--tRNA ligase [Yersinia pestis PY-65]
gi|391647030|gb|EIS84711.1| alanine--tRNA ligase [Yersinia pestis PY-76]
gi|391650472|gb|EIS87754.1| alanine--tRNA ligase [Yersinia pestis PY-88]
gi|391727312|gb|EIT56551.1| alanine--tRNA ligase [Yersinia pestis PY-113]
Length = 847
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N + VD + +G EA ++L+++ FY E GGQ+ D+G L N
Sbjct: 444 ALFRNGEAVDEIHAGEEAVVVLNRTPFYGESGGQVGDKG----------------ELKNA 487
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+ FS+++ +K + + + L+ TLRV ++ +D RR I NH+A
Sbjct: 488 TAT---------FSVTDTQKYGQAIGHVGILTTGTLRVNHSVEALVDVVRRNRIRLNHSA 538
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR VLG QKGSLV +L
Sbjct: 539 THLLHAALRNVLGEHVAQKGSLVNDKYLR 567
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 64/153 (41%), Gaps = 18/153 (11%)
Query: 14 LPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG-------- 65
L G+ A+RLYDTYGFPVDLT + E+ L VD +E A + + +G
Sbjct: 362 LDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSGFGADYNSL 421
Query: 66 --METSVEFCGGTHLAMAHHVGDFCISSE--EAIAKGSNIVSYCGSKGTFQSHSGSIND- 120
++++ +F G H+ V + E + I G V + G + D
Sbjct: 422 IRVDSASQFSGYDHVQQHATVTALFRNGEAVDEIHAGEEAVVVLNRTPFYGESGGQVGDK 481
Query: 121 -EMVNKYPSLYRLFRTVHKQKYVQDALNVSCLS 152
E+ N + F QKY Q +V L+
Sbjct: 482 GELKNATAT----FSVTDTQKYGQAIGHVGILT 510
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS 331
V TV L N + VD + +G EA ++L+++ FY E GGQ+ D+G + N SV+
Sbjct: 436 VQQHATVTALFRNGEAVDEIHAGEEAVVVLNRTPFYGESGGQVGDKGELKNATATFSVTD 495
Query: 332 GTEAG 336
+ G
Sbjct: 496 TQKYG 500
>gi|416032393|ref|ZP_11572803.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|348000123|gb|EGY40921.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
Length = 826
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 32/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++S+G A ++LD + FYAE GGQI D G LEG+ +
Sbjct: 431 VDTISAGQSAVVILDNTPFYAESGGQIGDIG-------------------RLEGNGF--- 468
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F + + +K ++ + L+ +L VG + +D RR+ I NH+ATH+L+ AL
Sbjct: 469 ---NFDVKDTQKYGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQHISLNHSATHLLHAAL 525
Query: 445 RFVLGPEADQKGSLV------YRYHLHENIMECE 472
R VLG QKGSLV + + HE I + +
Sbjct: 526 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQ 559
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGME 67
KVL G+VA++LYDTYGFP+DLT + E+G+++D +E ++ +++ SQ GM+
Sbjct: 339 KVLSGEVAFKLYDTYGFPLDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGMD 396
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
V L ++ + VD++S+G A ++LD + FYAE GGQI D G + F
Sbjct: 421 VTALFHDGKPVDTISAGQSAVVILDNTPFYAESGGQIGDIGRLEGNGF 468
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 219 TKHTPFVKRLRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
T+ K ++ + VD++S+G A ++LD + FYAE GGQI D G + G
Sbjct: 413 TESETLAKVTALFHDGKPVDTISAGQSAVVILDNTPFYAESGGQIGDIGRLEG 465
>gi|409437564|ref|ZP_11264673.1| alanyl-tRNA synthetase [Rhizobium mesoamericanum STM3625]
gi|408750600|emb|CCM75831.1| alanyl-tRNA synthetase [Rhizobium mesoamericanum STM3625]
Length = 886
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 32/164 (19%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
+ + + + VDS +SG + I+++++ FY E GGQ+ D G + +D ++IE+
Sbjct: 470 QAIVKDGRSVDSAASGDKVQIVVNQTPFYGESGGQMGDTGVI--SSDTAKIEI------- 520
Query: 377 LEGSKYALPIFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNH 434
++ +KK + V + + + GD + L +D ARR + +NH
Sbjct: 521 ----------------TDTQKKGEGLFVHIGTVVEGKVNAGDPVALTVDHARRSRLRANH 564
Query: 435 TATHILNHALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
+ATH+L+ ALR VLG QKGSLV L H M +E
Sbjct: 565 SATHLLHEALREVLGTHVAQKGSLVAPERLRFDVSHPKPMTADE 608
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 38/56 (67%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQ 63
LG+ +L G+ A++LYDTYGFP+DLTQ + + + VD+ + DA ++ ++E S
Sbjct: 377 LGKGDMLDGETAFKLYDTYGFPLDLTQDALRAREIGVDISGFTDAMERQKAEARSH 432
>gi|300692180|ref|YP_003753175.1| alanyl-tRNA synthetase [Ralstonia solanacearum PSI07]
gi|299079240|emb|CBJ51912.1| alanyl-tRNA synthetase [Ralstonia solanacearum PSI07]
Length = 880
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 74/164 (45%), Gaps = 32/164 (19%)
Query: 302 DKSNFYAEQGGQIYDEGFMSNKQFVDSVS-----SGTEAGILLDKSNFYAEQGGQIYDEG 356
DK+ F+ Q+ E FVD S G ++LD + FYAE GGQ+ DEG
Sbjct: 458 DKTTFHGYD--QLLSETSRVTALFVDGASVQEMHPGQTGVVVLDHTPFYAESGGQVGDEG 515
Query: 357 FMIGVNDESQIELWFSSLVNLEGSKYALP-IFLQFSLSNLKKKKKLVKLLHTLSHTLRVG 415
+ +WF ++ ++ LP +F + L+VG
Sbjct: 516 TLKAAT------VWF----DVADTQKVLPEVFGHHGTLR--------------TGVLKVG 551
Query: 416 DKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
D + +D RR M NH+ATH+++ ALR VLG QKGSLV
Sbjct: 552 DAVAAEVDAVRRARTMRNHSATHLMHKALREVLGAHVQQKGSLV 595
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
K+L G++A++L+DTYGFP+DLTQ + E + VD + DA Q E AG
Sbjct: 392 KMLDGELAFKLHDTYGFPLDLTQDVCRENDVIVDEAAF-DAAMNRQREQARAAG 444
>gi|159030141|emb|CAO91033.1| alaS [Microcystis aeruginosa PCC 7806]
Length = 878
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+S ++GTE ++LD++ FYAE GGQI D+G++ G N L+ +E +
Sbjct: 479 VESAAAGTEVQVVLDQTPFYAESGGQIGDKGYLTGDN----------LLIRVEDVQKESG 528
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
IF+ F + ++ +V GD + ID + RR +NHTATH+L AL+
Sbjct: 529 IFIHFG----RIERGVVT----------TGDTINAQIDRSCRRRAQANHTATHLLQSALK 574
Query: 446 FVLGPEADQKGSLV 459
++ Q GSLV
Sbjct: 575 KLVDAGISQAGSLV 588
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+L++I + +S++ G A+ LYDTYGFP++LTQ + EE+GLSVD +E KK Q
Sbjct: 372 LLESILEKEKSQI-SGVDAFTLYDTYGFPLELTQEIAEEQGLSVDTAGFEQEMKKQQQ-- 428
Query: 61 ESQAGMETSVEFCGGTHLAMAHHV 84
S+A ET G+ +A H+
Sbjct: 429 RSKAAHETIDLTVQGSLDKLAEHI 452
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
V+S ++GTE ++LD++ FYAE GGQI D+G++ G N
Sbjct: 479 VESAAAGTEVQVVLDQTPFYAESGGQIGDKGYLTGDN 515
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS-GTE 334
TV + + V+S ++GTE ++LD++ FYAE GGQI D+G+++ + V E
Sbjct: 467 ATVTAVLVAGKTVESAAAGTEVQVVLDQTPFYAESGGQIGDKGYLTGDNLLIRVEDVQKE 526
Query: 335 AGILL 339
+GI +
Sbjct: 527 SGIFI 531
>gi|443666102|ref|ZP_21133731.1| alanyl-tRNA synthetase [Microcystis aeruginosa DIANCHI905]
gi|443331273|gb|ELS45939.1| alanyl-tRNA synthetase [Microcystis aeruginosa DIANCHI905]
Length = 874
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+S ++GTE ++LD++ FYAE GGQI D+G++ G N L+ +E +
Sbjct: 475 VESAAAGTEVQVVLDQTPFYAESGGQIGDKGYLTGDN----------LLIRVEDVQKESG 524
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
IF+ F + ++ +V GD + ID + RR +NHTATH+L AL+
Sbjct: 525 IFIHFG----RIERGVVT----------TGDTINAQIDRSCRRRAQANHTATHLLQSALK 570
Query: 446 FVLGPEADQKGSLV 459
++ Q GSLV
Sbjct: 571 KLVDAGISQAGSLV 584
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+L++I + +S++ G A+ LYDTYGFP++LTQ + EE+GLSVD +E KK Q
Sbjct: 368 LLESILEKEKSQI-SGVDAFTLYDTYGFPLELTQEIAEEQGLSVDTAGFEQEMKKQQQ-- 424
Query: 61 ESQAGMETSVEFCGGTHLAMAHHV 84
S+A ET G+ +A H+
Sbjct: 425 RSKAAHETIDLTVQGSLDKLAEHI 448
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
V+S ++GTE ++LD++ FYAE GGQI D+G++ G N
Sbjct: 475 VESAAAGTEVQVVLDQTPFYAESGGQIGDKGYLTGDN 511
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS-GTE 334
TV + + V+S ++GTE ++LD++ FYAE GGQI D+G+++ + V E
Sbjct: 463 ATVTAVLVAGKTVESAAAGTEVQVVLDQTPFYAESGGQIGDKGYLTGDNLLIRVEDVQKE 522
Query: 335 AGILL 339
+GI +
Sbjct: 523 SGIFI 527
>gi|325267938|ref|ZP_08134587.1| alanine--tRNA ligase [Kingella denitrificans ATCC 33394]
gi|324980624|gb|EGC16287.1| alanine--tRNA ligase [Kingella denitrificans ATCC 33394]
Length = 873
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 23/133 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD + +G ++L+++ FYAE GGQ+ D GF++ + ++E + K
Sbjct: 477 VDELQAGEAGVVVLEQTPFYAESGGQVGDVGFIVSGENRFRVE---------DTQKIKAA 527
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
+ QF +S L+VGD + ID R IM NH+ TH+++ ALR
Sbjct: 528 VHGQFGA--------------VVSGRLKVGDAVSAEIDNDIRNSIMRNHSVTHLMHKALR 573
Query: 446 FVLGPEADQKGSL 458
VLG +QKGSL
Sbjct: 574 DVLGTHVEQKGSL 586
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDME 47
S L G++ ++LYDTYGFP DLT + E+ + +D E
Sbjct: 385 SNKLDGEIIFKLYDTYGFPYDLTADICRERNIDLDEE 421
>gi|416048630|ref|ZP_11576368.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|347992447|gb|EGY33848.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
Length = 874
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 32/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++S+G A ++LD + FYAE GGQI D G LEG+ +
Sbjct: 479 VDTISAGQSAVVILDNTPFYAESGGQIGDIG-------------------RLEGNGF--- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F + + +K ++ + L+ +L VG + +D RR+ I NH+ATH+L+ AL
Sbjct: 517 ---NFDVKDTQKYGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQHISLNHSATHLLHAAL 573
Query: 445 RFVLGPEADQKGSLV------YRYHLHENIMECE 472
R VLG QKGSLV + + HE I + +
Sbjct: 574 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQ 607
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGME 67
KVL G+VA++LYDTYGFP+DLT + E+G+++D +E ++ +++ SQ GM+
Sbjct: 387 KVLSGEVAFKLYDTYGFPLDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGMD 444
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
V L ++ + VD++S+G A ++LD + FYAE GGQI D G + F
Sbjct: 469 VTALFHDGKPVDTISAGQSAVVILDNTPFYAESGGQIGDIGRLEGNGF 516
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VD++S+G A ++LD + FYAE GGQI D G + G
Sbjct: 479 VDTISAGQSAVVILDNTPFYAESGGQIGDIGRLEG 513
>gi|424787395|ref|ZP_18214161.1| alanine--tRNA ligase [Streptococcus intermedius BA1]
gi|422113690|gb|EKU17417.1| alanine--tRNA ligase [Streptococcus intermedius BA1]
Length = 872
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 106/231 (45%), Gaps = 37/231 (16%)
Query: 239 SVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDEGTVVGLRYNKQFVD-SVSSGTEA 297
SV SGT+ L D F E +I +E M V+ EG ++ ++ SV G
Sbjct: 387 SVISGTDVFKLYDTYGFPVELTQEIAEEADMT-VDREGFEAAMKEQQERARASVVKGGSM 445
Query: 298 GILLDK-SNFYAEQGGQIYDEGFMSN-------KQFVDSVSSGTEAGILLDKSNFYAEQG 349
G+ + N AE E +N + V+ VS+G +A ++ ++ FYAE G
Sbjct: 446 GMQNETLQNITAESHFNYEKETLSANLVAIVAADEEVEEVSTG-KAYLVFSETPFYAEMG 504
Query: 350 GQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLS 409
GQ+ D G + + E Q+ + +V+++ + P LHT+
Sbjct: 505 GQVADHGHIF--DSEGQL---VAQVVDVQKAPNGQP-------------------LHTVE 540
Query: 410 --HTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSL 458
L +G + KL ID RR +M NHTATH+L+ AL VLG A Q GSL
Sbjct: 541 VLAPLMLGHEYKLEIDHDRRHRVMKNHTATHLLHAALHHVLGKHATQAGSL 591
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 3/58 (5%)
Query: 3 QTIAKLGESK---VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
Q+I K ++K V+ G ++LYDTYGFPV+LTQ + EE ++VD E +E A K+ Q
Sbjct: 375 QSIVKELKTKGQSVISGTDVFKLYDTYGFPVELTQEIAEEADMTVDREGFEAAMKEQQ 432
>gi|51595175|ref|YP_069366.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
gi|170025588|ref|YP_001722093.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
gi|186894190|ref|YP_001871302.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
gi|59798514|sp|Q66E68.1|SYA_YERPS RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830293|sp|B2K5X9.1|SYA_YERPB RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830296|sp|B1JJA0.1|SYA_YERPY RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|51588457|emb|CAH20065.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
gi|169752122|gb|ACA69640.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
gi|186697216|gb|ACC87845.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
Length = 875
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N + VD + +G EA ++L+++ FY E GGQ+ D+G L N
Sbjct: 472 ALFRNGEAVDEIHAGEEAVVVLNRTPFYGESGGQVGDKG----------------ELKNA 515
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+ FS+++ +K + + + L+ TLRV ++ +D RR I NH+A
Sbjct: 516 TAT---------FSVTDTQKYGQAIGHVGILTTGTLRVNHSVEALVDVVRRNRIRLNHSA 566
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR VLG QKGSLV +L
Sbjct: 567 THLLHAALRNVLGEHVAQKGSLVNDKYLR 595
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
L G+ A+RLYDTYGFPVDLT + E+ L VD +E A + + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSG 441
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS 331
V TV L N + VD + +G EA ++L+++ FY E GGQ+ D+G + N SV+
Sbjct: 464 VQQHATVTALFRNGEAVDEIHAGEEAVVVLNRTPFYGESGGQVGDKGELKNATATFSVTD 523
Query: 332 GTEAG 336
+ G
Sbjct: 524 TQKYG 528
>gi|22124793|ref|NP_668216.1| alanyl-tRNA synthetase [Yersinia pestis KIM10+]
gi|45440238|ref|NP_991777.1| alanyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
gi|108810954|ref|YP_646721.1| alanyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|145600311|ref|YP_001164387.1| alanyl-tRNA synthetase [Yersinia pestis Pestoides F]
gi|153997648|ref|ZP_02022748.1| alanyl-tRNA synthetase [Yersinia pestis CA88-4125]
gi|162420472|ref|YP_001605466.1| alanyl-tRNA synthetase [Yersinia pestis Angola]
gi|165925794|ref|ZP_02221626.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165936759|ref|ZP_02225326.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
IP275]
gi|166010167|ref|ZP_02231065.1| alanyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166213026|ref|ZP_02239061.1| alanyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398342|ref|ZP_02303866.1| alanyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167421632|ref|ZP_02313385.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423275|ref|ZP_02315028.1| alanyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|167467648|ref|ZP_02332352.1| alanyl-tRNA synthetase [Yersinia pestis FV-1]
gi|218930326|ref|YP_002348201.1| alanyl-tRNA synthetase [Yersinia pestis CO92]
gi|229838925|ref|ZP_04459084.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229896406|ref|ZP_04511574.1| alanyl-tRNA synthetase [Yersinia pestis Pestoides A]
gi|229899492|ref|ZP_04514633.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229901170|ref|ZP_04516293.1| alanyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|270489353|ref|ZP_06206427.1| alanine--tRNA ligase [Yersinia pestis KIM D27]
gi|384138849|ref|YP_005521551.1| alanyl-tRNA synthetase [Yersinia pestis A1122]
gi|384415995|ref|YP_005625357.1| alanyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|420548395|ref|ZP_15046205.1| alanine--tRNA ligase [Yersinia pestis PY-01]
gi|420553741|ref|ZP_15050976.1| alanine--tRNA ligase [Yersinia pestis PY-02]
gi|420569780|ref|ZP_15065269.1| alanine--tRNA ligase [Yersinia pestis PY-05]
gi|420575442|ref|ZP_15070392.1| alanine--tRNA ligase [Yersinia pestis PY-06]
gi|420580768|ref|ZP_15075237.1| alanine--tRNA ligase [Yersinia pestis PY-07]
gi|420607695|ref|ZP_15099457.1| alanine--tRNA ligase [Yersinia pestis PY-12]
gi|420623789|ref|ZP_15113780.1| alanine--tRNA ligase [Yersinia pestis PY-15]
gi|420639183|ref|ZP_15127650.1| alanine--tRNA ligase [Yersinia pestis PY-25]
gi|420644638|ref|ZP_15132627.1| alanine--tRNA ligase [Yersinia pestis PY-29]
gi|420649936|ref|ZP_15137415.1| alanine--tRNA ligase [Yersinia pestis PY-32]
gi|420655573|ref|ZP_15142478.1| alanine--tRNA ligase [Yersinia pestis PY-34]
gi|420671230|ref|ZP_15156600.1| alanine--tRNA ligase [Yersinia pestis PY-45]
gi|420682201|ref|ZP_15166541.1| alanine--tRNA ligase [Yersinia pestis PY-47]
gi|420692771|ref|ZP_15175877.1| alanine--tRNA ligase [Yersinia pestis PY-52]
gi|420715174|ref|ZP_15195184.1| alanine--tRNA ligase [Yersinia pestis PY-56]
gi|420720686|ref|ZP_15199907.1| alanine--tRNA ligase [Yersinia pestis PY-58]
gi|420731760|ref|ZP_15209764.1| alanine--tRNA ligase [Yersinia pestis PY-60]
gi|420742228|ref|ZP_15219193.1| alanine--tRNA ligase [Yersinia pestis PY-63]
gi|420764452|ref|ZP_15238176.1| alanine--tRNA ligase [Yersinia pestis PY-71]
gi|420769672|ref|ZP_15242857.1| alanine--tRNA ligase [Yersinia pestis PY-72]
gi|420785869|ref|ZP_15257203.1| alanine--tRNA ligase [Yersinia pestis PY-89]
gi|420791004|ref|ZP_15261819.1| alanine--tRNA ligase [Yersinia pestis PY-90]
gi|420796525|ref|ZP_15266784.1| alanine--tRNA ligase [Yersinia pestis PY-91]
gi|420801592|ref|ZP_15271337.1| alanine--tRNA ligase [Yersinia pestis PY-92]
gi|420806939|ref|ZP_15276180.1| alanine--tRNA ligase [Yersinia pestis PY-93]
gi|420823124|ref|ZP_15290740.1| alanine--tRNA ligase [Yersinia pestis PY-96]
gi|420828207|ref|ZP_15295309.1| alanine--tRNA ligase [Yersinia pestis PY-98]
gi|420833910|ref|ZP_15300463.1| alanine--tRNA ligase [Yersinia pestis PY-99]
gi|420843952|ref|ZP_15309556.1| alanine--tRNA ligase [Yersinia pestis PY-101]
gi|420849617|ref|ZP_15314639.1| alanine--tRNA ligase [Yersinia pestis PY-102]
gi|421764808|ref|ZP_16201596.1| alanyl-tRNA ligase [Yersinia pestis INS]
gi|20532253|sp|Q8ZBT8.1|SYA_YERPE RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|122385127|sp|Q1CLK9.1|SYA_YERPN RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830294|sp|A9R0V7.1|SYA_YERPG RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830295|sp|A4TQ52.1|SYA_YERPP RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|21957617|gb|AAM84467.1|AE013691_6 alanyl-tRNA synthetase [Yersinia pestis KIM10+]
gi|45435094|gb|AAS60654.1| alanyl-tRNA synthetase [Yersinia pestis biovar Microtus str. 91001]
gi|108774602|gb|ABG17121.1| alanyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|115348937|emb|CAL21896.1| alanyl-tRNA synthetase [Yersinia pestis CO92]
gi|145212007|gb|ABP41414.1| alanyl-tRNA synthetase [Yersinia pestis Pestoides F]
gi|149289285|gb|EDM39365.1| alanyl-tRNA synthetase [Yersinia pestis CA88-4125]
gi|162353287|gb|ABX87235.1| alanyl-tRNA synthetase [Yersinia pestis Angola]
gi|165915408|gb|EDR34018.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
IP275]
gi|165922406|gb|EDR39583.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165991074|gb|EDR43375.1| alanyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166205813|gb|EDR50293.1| alanyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166960551|gb|EDR56572.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167050846|gb|EDR62254.1| alanyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057445|gb|EDR67191.1| alanyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229681895|gb|EEO77988.1| alanyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|229686984|gb|EEO79059.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229695291|gb|EEO85338.1| alanyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229700480|gb|EEO88511.1| alanyl-tRNA synthetase [Yersinia pestis Pestoides A]
gi|270337857|gb|EFA48634.1| alanine--tRNA ligase [Yersinia pestis KIM D27]
gi|320016499|gb|ADW00071.1| alanyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
Harbin 35]
gi|342853978|gb|AEL72531.1| alanyl-tRNA synthetase [Yersinia pestis A1122]
gi|391422979|gb|EIQ85507.1| alanine--tRNA ligase [Yersinia pestis PY-01]
gi|391423128|gb|EIQ85639.1| alanine--tRNA ligase [Yersinia pestis PY-02]
gi|391439111|gb|EIQ99799.1| alanine--tRNA ligase [Yersinia pestis PY-05]
gi|391442893|gb|EIR03260.1| alanine--tRNA ligase [Yersinia pestis PY-06]
gi|391454857|gb|EIR14026.1| alanine--tRNA ligase [Yersinia pestis PY-07]
gi|391473064|gb|EIR30473.1| alanine--tRNA ligase [Yersinia pestis PY-12]
gi|391488372|gb|EIR44227.1| alanine--tRNA ligase [Yersinia pestis PY-15]
gi|391508035|gb|EIR61814.1| alanine--tRNA ligase [Yersinia pestis PY-25]
gi|391518693|gb|EIR71389.1| alanine--tRNA ligase [Yersinia pestis PY-29]
gi|391520100|gb|EIR72681.1| alanine--tRNA ligase [Yersinia pestis PY-34]
gi|391521130|gb|EIR73623.1| alanine--tRNA ligase [Yersinia pestis PY-32]
gi|391538658|gb|EIR89448.1| alanine--tRNA ligase [Yersinia pestis PY-45]
gi|391551766|gb|EIS01251.1| alanine--tRNA ligase [Yersinia pestis PY-47]
gi|391566566|gb|EIS14543.1| alanine--tRNA ligase [Yersinia pestis PY-52]
gi|391583083|gb|EIS28781.1| alanine--tRNA ligase [Yersinia pestis PY-56]
gi|391593621|gb|EIS37899.1| alanine--tRNA ligase [Yersinia pestis PY-58]
gi|391596695|gb|EIS40605.1| alanine--tRNA ligase [Yersinia pestis PY-60]
gi|391611546|gb|EIS53711.1| alanine--tRNA ligase [Yersinia pestis PY-63]
gi|391634865|gb|EIS74091.1| alanine--tRNA ligase [Yersinia pestis PY-71]
gi|391636880|gb|EIS75867.1| alanine--tRNA ligase [Yersinia pestis PY-72]
gi|391654856|gb|EIS91655.1| alanine--tRNA ligase [Yersinia pestis PY-89]
gi|391659860|gb|EIS96089.1| alanine--tRNA ligase [Yersinia pestis PY-90]
gi|391667468|gb|EIT02799.1| alanine--tRNA ligase [Yersinia pestis PY-91]
gi|391676897|gb|EIT11257.1| alanine--tRNA ligase [Yersinia pestis PY-93]
gi|391677594|gb|EIT11887.1| alanine--tRNA ligase [Yersinia pestis PY-92]
gi|391693807|gb|EIT26521.1| alanine--tRNA ligase [Yersinia pestis PY-96]
gi|391695344|gb|EIT27922.1| alanine--tRNA ligase [Yersinia pestis PY-98]
gi|391707927|gb|EIT39229.1| alanine--tRNA ligase [Yersinia pestis PY-99]
gi|391711870|gb|EIT42795.1| alanine--tRNA ligase [Yersinia pestis PY-101]
gi|391723862|gb|EIT53497.1| alanine--tRNA ligase [Yersinia pestis PY-102]
gi|411174359|gb|EKS44392.1| alanyl-tRNA ligase [Yersinia pestis INS]
Length = 875
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N + VD + +G EA ++L+++ FY E GGQ+ D+G L N
Sbjct: 472 ALFRNGEAVDEIHAGEEAVVVLNRTPFYGESGGQVGDKG----------------ELKNA 515
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+ FS+++ +K + + + L+ TLRV ++ +D RR I NH+A
Sbjct: 516 TAT---------FSVTDTQKYGQAIGHVGILTTGTLRVNHSVEALVDVVRRNRIRLNHSA 566
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR VLG QKGSLV +L
Sbjct: 567 THLLHAALRNVLGEHVAQKGSLVNDKYLR 595
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
L G+ A+RLYDTYGFPVDLT + E+ L VD +E A + + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSG 441
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS 331
V TV L N + VD + +G EA ++L+++ FY E GGQ+ D+G + N SV+
Sbjct: 464 VQQHATVTALFRNGEAVDEIHAGEEAVVVLNRTPFYGESGGQVGDKGELKNATATFSVTD 523
Query: 332 GTEAG 336
+ G
Sbjct: 524 TQKYG 528
>gi|153950576|ref|YP_001402195.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
gi|205830292|sp|A7FLR7.1|SYA_YERP3 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|152962071|gb|ABS49532.1| alanyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
Length = 875
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N + VD + +G EA ++L+++ FY E GGQ+ D+G L N
Sbjct: 472 ALFRNGEAVDEIHAGEEAVVVLNRTPFYGESGGQVGDKG----------------ELKNA 515
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+ FS+++ +K + + + L+ TLRV ++ +D RR I NH+A
Sbjct: 516 TAT---------FSVTDTQKYGQAIGHVGILTTGTLRVNHSVEALVDVVRRNRIRLNHSA 566
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR VLG QKGSLV +L
Sbjct: 567 THLLHAALRNVLGEHVAQKGSLVNDKYLR 595
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
L G+ A+RLYDTYGFPVDLT + E+ L VD +E A + + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSG 441
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS 331
V TV L N + VD + +G EA ++L+++ FY E GGQ+ D+G + N SV+
Sbjct: 464 VQQHATVTALFRNGEAVDEIHAGEEAVVVLNRTPFYGESGGQVGDKGELKNATATFSVTD 523
Query: 332 GTEAG 336
+ G
Sbjct: 524 TQKYG 528
>gi|387120758|ref|YP_006286641.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|415763244|ref|ZP_11482047.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|348654668|gb|EGY70269.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D17P-3]
gi|385875250|gb|AFI86809.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 874
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 32/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++S+G A ++LD + FYAE GGQI D G LEG+ +
Sbjct: 479 VDTISAGQSAVVILDNTPFYAESGGQIGDIG-------------------RLEGNGF--- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F + + +K ++ + L+ +L VG + +D RR+ I NH+ATH+L+ AL
Sbjct: 517 ---NFDVKDTQKYGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQHISLNHSATHLLHAAL 573
Query: 445 RFVLGPEADQKGSLV------YRYHLHENIMECE 472
R VLG QKGSLV + + HE I + +
Sbjct: 574 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQ 607
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGME 67
KVL G+VA++LYDTYGFP+DLT + E+G+++D +E ++ +++ SQ GM+
Sbjct: 387 KVLSGEVAFKLYDTYGFPLDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGMD 444
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
V L ++ + VD++S+G A ++LD + FYAE GGQI D G + F
Sbjct: 469 VTALFHDGKPVDTISAGQSAVVILDNTPFYAESGGQIGDIGRLEGNGF 516
Score = 39.3 bits (90), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VD++S+G A ++LD + FYAE GGQI D G + G
Sbjct: 479 VDTISAGQSAVVILDNTPFYAESGGQIGDIGRLEG 513
>gi|429732378|ref|ZP_19266992.1| alanine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
gi|429156426|gb|EKX99058.1| alanine--tRNA ligase [Aggregatibacter actinomycetemcomitans Y4]
Length = 874
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 32/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++S+G A ++LD + FYAE GGQI D G LEG+ +
Sbjct: 479 VDTISAGQSAVVILDNTPFYAESGGQIGDIG-------------------RLEGNGF--- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F + + +K ++ + L+ +L VG + +D RR+ I NH+ATH+L+ AL
Sbjct: 517 ---NFDVKDTQKYGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQHISLNHSATHLLHAAL 573
Query: 445 RFVLGPEADQKGSLV------YRYHLHENIMECE 472
R VLG QKGSLV + + HE I + +
Sbjct: 574 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQ 607
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGME 67
KVL G+VA++LYDTYGFP+DLT + E+G+++D +E ++ +++ SQ GM+
Sbjct: 387 KVLSGEVAFKLYDTYGFPLDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGMD 444
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
V L ++ + VD++S+G A ++LD + FYAE GGQI D G + F
Sbjct: 469 VTALFHDGKPVDTISAGQSAVVILDNTPFYAESGGQIGDIGRLEGNGF 516
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VD++S+G A ++LD + FYAE GGQI D G + G
Sbjct: 479 VDTISAGQSAVVILDNTPFYAESGGQIGDIGRLEG 513
>gi|91202499|emb|CAJ72138.1| strongly similar to alanyl-tRNA synthetase [Candidatus Kuenenia
stuttgartiensis]
Length = 885
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 71/146 (48%), Gaps = 30/146 (20%)
Query: 325 FVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYAL 384
++ +G+E I+LD++ FY E GGQI D G + ES EGS
Sbjct: 483 LIEKAEAGSEVSIVLDQTPFYGESGGQIGDTGIL-----ES------------EGS---- 521
Query: 385 PIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
+++ KK + + ++ +R GD + IDT RR I NHTATH+L+
Sbjct: 522 ----HICITDTKKNDSFIIHIGKITKGIVRTGDMIDARIDTHRRGLIKRNHTATHVLHWV 577
Query: 444 LRFVLGPEADQKGSLV----YRYHLH 465
LR V+G A+Q GS+V R+ H
Sbjct: 578 LRNVIGRHAEQAGSMVSPDRLRFDFH 603
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSV 70
K LPG A++LYDTYGFP+D+T+L+++E G S+D E K+ + + S + M V
Sbjct: 386 KELPGKEAFKLYDTYGFPLDMTELILKEHGFSMDSAGVEVELKRQRMQARSSSSMTGQV 444
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 15/78 (19%)
Query: 261 GQIYDEGFMIGVND--EGT-------------VVGLRYNKQFVDSVSSGTEAGILLDKSN 305
GQ++D GF+ + + +GT ++ + ++ +G+E I+LD++
Sbjct: 442 GQVFDAGFLGKIKEISKGTTFLGYEKDSCRARIIAIVQGDYLIEKAEAGSEVSIVLDQTP 501
Query: 306 FYAEQGGQIYDEGFMSNK 323
FY E GGQI D G + ++
Sbjct: 502 FYGESGGQIGDTGILESE 519
>gi|416067826|ref|ZP_11582508.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|348001770|gb|EGY42502.1| alanyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
Length = 874
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 32/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD++S+G A ++LD + FYAE GGQI D G LEG+ +
Sbjct: 479 VDTISAGQSAVVILDNTPFYAESGGQIGDIG-------------------RLEGNGF--- 516
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F + + +K ++ + L+ +L VG + +D RR+ I NH+ATH+L+ AL
Sbjct: 517 ---NFDVKDTQKYGQVFGHIGELTQGSLSVGQSVNAVVDEVRRQHISLNHSATHLLHAAL 573
Query: 445 RFVLGPEADQKGSLV------YRYHLHENIMECE 472
R VLG QKGSLV + + HE I + +
Sbjct: 574 RQVLGEHVAQKGSLVSDALLRFDFAQHEPISKAQ 607
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYED--AKKKAQSEPESQAGME 67
KVL G+VA++LYDTYGFP+DLT + E+G+++D +E ++ +++ SQ GM+
Sbjct: 387 KVLSGEVAFKLYDTYGFPLDLTADVCRERGITIDEAGFEREMENQRLRAQSASQFGMD 444
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 30/48 (62%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
V L ++ + VD++S+G A ++LD + FYAE GGQI D G + F
Sbjct: 469 VTALFHDGKPVDTISAGQSAVVILDNTPFYAESGGQIGDIGRLEGNGF 516
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
VD++S+G A ++LD + FYAE GGQI D G + G
Sbjct: 479 VDTISAGQSAVVILDNTPFYAESGGQIGDIGRLEG 513
>gi|90423082|ref|YP_531452.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
gi|122476792|sp|Q218Q3.1|SYA_RHOPB RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|90105096|gb|ABD87133.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
Length = 890
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 68/148 (45%), Gaps = 25/148 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + Q VD + G I+L+++ FYAE GGQ+ D G M G E
Sbjct: 472 LVKDGQKVDQLKVGEAGAIVLNQTPFYAESGGQVGDTGVMTG-----------------E 514
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTAT 437
G ++ + KK L L T+ TL L L +D RR I +NH+AT
Sbjct: 515 GVRFRV-------TETQKKAHDLFVHLGTVEQGTLTPDTALLLEVDHTRRSSIRANHSAT 567
Query: 438 HILNHALRFVLGPEADQKGSLVYRYHLH 465
H+L+ ALR VLG QKGSLV L
Sbjct: 568 HLLHEALRQVLGDHIAQKGSLVAEDRLR 595
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA--KKKAQSEPESQAG 65
L + + G+ A+ LYDTYGFP+DLTQ + +G+SVD+ + DA +++A++
Sbjct: 377 LKKGDMFDGETAFTLYDTYGFPLDLTQDALRNRGISVDIASFTDAMDRQRAKARASWAGS 436
Query: 66 METSVE 71
+T+ E
Sbjct: 437 GDTATE 442
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNK 323
EG V L + Q VD + G I+L+++ FYAE GGQ+ D G M+ +
Sbjct: 466 EGVVAALVKDGQKVDQLKVGEAGAIVLNQTPFYAESGGQVGDTGVMTGE 514
>gi|205830250|sp|Q07R87.2|SYA_RHOP5 RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 891
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 27/153 (17%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + Q VD + +G I+L+++ FYAE GGQ+ D G +++ +
Sbjct: 472 LVKDGQVVDQLKTGDSGAIVLNQTPFYAESGGQVGDTG-----------------VLSAD 514
Query: 379 GSKYALPIFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
G ++F ++ +KK V L T+++ L L++D RR I +NH+A
Sbjct: 515 G--------VRFRVTETQKKAGDLFVHLGTVEEGTIKLATALALNVDHDRRGAIRANHSA 566
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLHENIM 469
TH+L+ ALR VLG QKGSLV L + M
Sbjct: 567 THLLHEALRQVLGDHIAQKGSLVAPDRLRFDFM 599
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQS 58
L + + G+ A+ LYDTYGFP+DLTQ + +G+SVD+ + DA + ++
Sbjct: 377 LKQGDMFDGETAFTLYDTYGFPLDLTQDALRARGISVDIASFTDAMDRQRA 427
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
E V L + Q VD + +G I+L+++ FYAE GGQ+ D G +S
Sbjct: 466 EAEVAALVKDGQVVDQLKTGDSGAIVLNQTPFYAESGGQVGDTGVLS 512
>gi|115523616|ref|YP_780527.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
gi|115517563|gb|ABJ05547.1| alanyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
Length = 893
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 76/153 (49%), Gaps = 27/153 (17%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + Q VD + +G I+L+++ FYAE GGQ+ D G +++ +
Sbjct: 474 LVKDGQVVDQLKTGDSGAIVLNQTPFYAESGGQVGDTG-----------------VLSAD 516
Query: 379 GSKYALPIFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
G ++F ++ +KK V L T+++ L L++D RR I +NH+A
Sbjct: 517 G--------VRFRVTETQKKAGDLFVHLGTVEEGTIKLATALALNVDHDRRGAIRANHSA 568
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLHENIM 469
TH+L+ ALR VLG QKGSLV L + M
Sbjct: 569 THLLHEALRQVLGDHIAQKGSLVAPDRLRFDFM 601
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 34/51 (66%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQS 58
L + + G+ A+ LYDTYGFP+DLTQ + +G+SVD+ + DA + ++
Sbjct: 379 LKQGDMFDGETAFTLYDTYGFPLDLTQDALRARGISVDIASFTDAMDRQRA 429
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
E V L + Q VD + +G I+L+++ FYAE GGQ+ D G +S
Sbjct: 468 EAEVAALVKDGQVVDQLKTGDSGAIVLNQTPFYAESGGQVGDTGVLS 514
>gi|443321755|ref|ZP_21050797.1| alanyl-tRNA synthetase [Gloeocapsa sp. PCC 73106]
gi|442788525|gb|ELR98216.1| alanyl-tRNA synthetase [Gloeocapsa sp. PCC 73106]
Length = 878
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 26/154 (16%)
Query: 307 YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQ 366
YA+ Q + + V+ +GTE I+LD++ FYAE GGQ D G++ G N
Sbjct: 459 YAQNQAQAKVTAILVAGKSVEIAEAGTELQIVLDQTPFYAESGGQTGDRGYLGGNN---- 514
Query: 367 IELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTA 425
L +S+++K+ + + ++VGD + ID A
Sbjct: 515 ---------------------LVIRISDVQKESGMFIHFGRIERGVIQVGDTITASIDRA 553
Query: 426 RRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
RR + ++HTATH+L AL+ ++G Q GSLV
Sbjct: 554 CRRRVQAHHTATHLLQAALKKIVGESVSQAGSLV 587
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 19 AWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSVEFCGGT-- 76
A+ LYDTYGFP++LTQ + E ++VD+E +E K Q SQ+ ET G+
Sbjct: 388 AFTLYDTYGFPLELTQEIATENNMTVDIEAFETEMK--QQRQRSQSAHETIDLTIQGSLD 445
Query: 77 HLAMAHHVGDFC-ISSEEAIAKGSNIV 102
LA + H +F + +A AK + I+
Sbjct: 446 QLAASIHPTEFVGYAQNQAQAKVTAIL 472
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 288 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVS 330
V+ +GTE I+LD++ FYAE GGQ D G++ V +S
Sbjct: 478 VEIAEAGTELQIVLDQTPFYAESGGQTGDRGYLGGNNLVIRIS 520
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
V+ +GTE I+LD++ FYAE GGQ D G++ G N
Sbjct: 478 VEIAEAGTELQIVLDQTPFYAESGGQTGDRGYLGGNN 514
>gi|108808831|ref|YP_652747.1| alanyl-tRNA synthetase [Yersinia pestis Antiqua]
gi|122382877|sp|Q1C420.1|SYA_YERPA RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|108780744|gb|ABG14802.1| alanyl-tRNA synthetase [Yersinia pestis Antiqua]
Length = 738
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 74/149 (49%), Gaps = 26/149 (17%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
N + VD + +G EA ++L+++ FY E GGQ+ D+G L N
Sbjct: 472 ALFRNGEAVDEIHAGEEAVVVLNRTPFYGESGGQVGDKG----------------ELKNA 515
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTA 436
+ FS+++ +K + + + L+ TLRV ++ +D RR I NH+A
Sbjct: 516 TAT---------FSVTDTQKYGQAIGHVGILTTGTLRVNHSVEALVDVVRRNRIRLNHSA 566
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHLH 465
TH+L+ ALR VLG QKGSLV +L
Sbjct: 567 THLLHAALRNVLGEHVAQKGSLVNDKYLR 595
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
L G+ A+RLYDTYGFPVDLT + E+ L VD +E A + + +G
Sbjct: 389 TLDGETAFRLYDTYGFPVDLTADVCRERNLKVDEAGFEQAMEAQRRRARESSG 441
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS 331
V TV L N + VD + +G EA ++L+++ FY E GGQ+ D+G + N SV+
Sbjct: 464 VQQHATVTALFRNGEAVDEIHAGEEAVVVLNRTPFYGESGGQVGDKGELKNATATFSVTD 523
Query: 332 GTEAG 336
+ G
Sbjct: 524 TQKYG 528
>gi|319784062|ref|YP_004143538.1| alanyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169950|gb|ADV13488.1| alanyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 888
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 27/164 (16%)
Query: 307 YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQ 366
Y + + + + + + VD G I+++++ FYAE GGQ+ D G + G
Sbjct: 460 YETEAAEGIIQALVRDGKAVDGAGKGDAVAIVVNQTPFYAESGGQMGDTGVISG------ 513
Query: 367 IELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDT 424
EG +S+ +KK V + S T++ G ++L +D
Sbjct: 514 -----------EG--------FSIEVSDTQKKADGLFVHIGKVASGTVKTGAAVELKVDH 554
Query: 425 ARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLHENI 468
ARR + +NH+ATH+++ ALR VLG QKGSLV L +I
Sbjct: 555 ARRSRLRANHSATHLIHEALREVLGSHVAQKGSLVAPERLRFDI 598
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 35/47 (74%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSE 59
+L G+ A++LYDTYGFP+DLTQ + ++ +SVD + +A ++ ++E
Sbjct: 382 MLDGETAFKLYDTYGFPLDLTQDALRQRSISVDTAGFTNAMEQQKAE 428
>gi|238921100|ref|YP_002934615.1| alanyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
gi|238870669|gb|ACR70380.1| alanyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
Length = 875
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 26/139 (18%)
Query: 322 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSK 381
N + VD + +G E ++L ++ FYAE GGQ+ D G ++ +G +
Sbjct: 476 NGEAVDVLQAGEEGVVVLAQTPFYAESGGQVGDRGELMA-----------------QGCR 518
Query: 382 YALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHIL 440
F + + +K + + L ++ +LRVG++++ ID ARR I +H+ATH++
Sbjct: 519 --------FVVEDTQKYGQAIGHLGKVAQGSLRVGERVQAGIDGARRERIRQSHSATHLM 570
Query: 441 NHALRFVLGPEADQKGSLV 459
+ ALR VLG QKGSLV
Sbjct: 571 HAALRSVLGEHVAQKGSLV 589
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAG 65
+ L G+ A+RLYDTYGFP+DLT + E+ L VD E +E A + + +G
Sbjct: 386 DGDTLDGETAFRLYDTYGFPLDLTADVCRERSLKVDEEGFERAMEAQRCRARESSG 441
>gi|430003826|emb|CCF19617.1| alanyl-tRNA synthetase [Rhizobium sp.]
Length = 886
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 77/155 (49%), Gaps = 32/155 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V++V++G ++++++ FY E GGQ+ D G + D +++E+
Sbjct: 479 VEAVTAGETVQVVVNQTPFYGESGGQMGDTGVI--TTDHARLEV---------------- 520
Query: 386 IFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHA 443
++ +KK + V +S TL+ G+ + L +D RR + SNH+ATH+L+ A
Sbjct: 521 -------TDTQKKGEGLFVHSAQVVSGTLKAGEAVMLAVDHGRRSQLRSNHSATHLLHEA 573
Query: 444 LRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
LR VLG QKGSLV L H M EE
Sbjct: 574 LREVLGSHVAQKGSLVAPERLRFDISHPKPMSGEE 608
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
L + L G+ A++LYDTYGFP+DLTQ + +G+ VD+ + DA ++ ++E +
Sbjct: 377 LSKGDSLDGETAFKLYDTYGFPLDLTQDALRARGIGVDIMGFNDAMQRQKAEARA 431
>gi|254430394|ref|ZP_05044097.1| alanyl-tRNA synthetase [Cyanobium sp. PCC 7001]
gi|197624847|gb|EDY37406.1| alanyl-tRNA synthetase [Cyanobium sp. PCC 7001]
Length = 907
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 71/152 (46%), Gaps = 20/152 (13%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
+ N + + ++G I+LD + FY E GGQ+ D G ++G D++ ++ +V++
Sbjct: 479 ALVVNGEPAERAAAGDAVQIVLDSTPFYGEGGGQVGDRGVLLGGGDQTAVDAGV--IVSI 536
Query: 378 EGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
E +F+ L VGD + +D A RR +NHTAT
Sbjct: 537 EAVSRNRSVFVHSG--------------RVERGALAVGDLVTARVDGACRRRAQANHTAT 582
Query: 438 HILNHALRFVLGPEADQKGSLV----YRYHLH 465
H+L AL+ V+ P+ Q GSLV R+ H
Sbjct: 583 HLLQAALKQVVDPDIGQAGSLVDFDRLRFDFH 614
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 33/41 (80%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDA 52
+ + GD A+ LYDTYGFP++LTQ + EE+GL+VD+E +E A
Sbjct: 390 RQISGDQAFELYDTYGFPLELTQEIAEEQGLTVDLEGFEAA 430
>gi|416352940|ref|ZP_11681422.1| alanyl-tRNA synthetase [Clostridium botulinum C str. Stockholm]
gi|338195671|gb|EGO87923.1| alanyl-tRNA synthetase [Clostridium botulinum C str. Stockholm]
Length = 463
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 71/147 (48%), Gaps = 23/147 (15%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ N FVD + +G + I+ DK+ FYAE GGQI D+G + +++E + N+
Sbjct: 58 IIKNDDFVDCIKAGEKGIIVTDKTPFYAEMGGQIGDKGTISADGFVAKVENCKN---NIG 114
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G K++ + + +++GD++ L +D RR + NH+ TH
Sbjct: 115 G--------------------KIIHFVEVIEGNIKLGDEVLLEVDRVRRDNVSKNHSTTH 154
Query: 439 ILNHALRFVLGPEADQKGSLVYRYHLH 465
+L+ ALR VLG Q GS V L
Sbjct: 155 LLHAALREVLGDHVHQSGSYVDEDKLR 181
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 25/37 (67%)
Query: 233 NKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 269
N FVD + +G + I+ DK+ FYAE GGQI D+G +
Sbjct: 61 NDDFVDCIKAGEKGIIVTDKTPFYAEMGGQIGDKGTI 97
>gi|284799808|ref|ZP_06390350.1| alanine--tRNA ligase [Neisseria subflava NJ9703]
gi|284796867|gb|EFC52214.1| alanine--tRNA ligase [Neisseria subflava NJ9703]
Length = 624
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 23/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ ++ G E +++D + FYAE GGQ+ D G++ + ++ + K
Sbjct: 227 VNELNEGDEGAVVIDFTPFYAESGGQVGDVGYIFAGENRFEVR---------DTQKIKAA 277
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
+F QF + S L+VGD + +D R M NH+ATH+++ ALR
Sbjct: 278 VFGQFGVQT--------------SGRLKVGDSVTAKVDDEIRNANMRNHSATHLMHKALR 323
Query: 446 FVLGPEADQKGSLV 459
VLG +QKGSLV
Sbjct: 324 DVLGEHVEQKGSLV 337
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
V+ G+ ++LYDTYGFP DLT M E G+ +D +E
Sbjct: 137 VIGGEHIFKLYDTYGFPYDLTADMARELGIDLDEAGFE 174
>gi|261379016|ref|ZP_05983589.1| alanine--tRNA ligase [Neisseria cinerea ATCC 14685]
gi|269144550|gb|EEZ70968.1| alanine--tRNA ligase [Neisseria cinerea ATCC 14685]
Length = 874
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 23/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD ++ G +++D + FYAE GGQ+ D G++ + ++ + K
Sbjct: 477 VDELNEGDSGAVVIDFTPFYAESGGQVGDVGYIFAGENRFEVR---------DTQKIKAA 527
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
+F QF + S L+VGD + +D R M NH+ATH+++ ALR
Sbjct: 528 VFGQFGVQT--------------SGRLKVGDSVTAKVDDGIRNANMRNHSATHLMHKALR 573
Query: 446 FVLGPEADQKGSLV 459
VLG +QKGSLV
Sbjct: 574 DVLGEHVEQKGSLV 587
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 26/39 (66%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
K L G++ ++LYDTYGFP DLT + E+ + +D +E
Sbjct: 386 KTLDGEIIFKLYDTYGFPYDLTADICRERNIELDEAGFE 424
>gi|163814106|ref|ZP_02205498.1| hypothetical protein COPEUT_00259 [Coprococcus eutactus ATCC 27759]
gi|158450555|gb|EDP27550.1| alanine--tRNA ligase [Coprococcus eutactus ATCC 27759]
Length = 887
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 75/162 (46%), Gaps = 28/162 (17%)
Query: 317 EGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVN 376
EG D+VS G +A I++ ++ FYA GGQI D+G + N +E V
Sbjct: 480 EGKDKKSVLADTVSEGAQATIIVPETPFYATMGGQIGDKGIIKTKNGTFVVE----DTVK 535
Query: 377 LEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
+ G K A +++ S L VGD+ +L +D R I +NH+A
Sbjct: 536 VVGGKIAHIGYVE-------------------SGELNVGDEAELTVDAENRALICNNHSA 576
Query: 437 THILNHALRFVLGPEADQKGSLVYRYHL-----HENIMECEE 473
TH+L AL+ VLG +Q GSLV L H+ M EE
Sbjct: 577 THLLQKALKMVLGDHVEQAGSLVEPGRLRFDFSHDQAMTKEE 618
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 31/39 (79%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD 45
K KVL GD A++LYDTYGFP+DLT+ ++EE+G+ VD
Sbjct: 378 KAAGEKVLSGDKAFKLYDTYGFPLDLTKEIIEEEGIEVD 416
>gi|344173991|emb|CCA89182.1| alanyl-tRNA synthetase [Ralstonia syzygii R24]
Length = 897
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 74/164 (45%), Gaps = 32/164 (19%)
Query: 302 DKSNFYAEQGGQIYDEGFMSNKQFVDSVS-----SGTEAGILLDKSNFYAEQGGQIYDEG 356
DK+ F+ Q+ E FVD S G ++LD + FYAE GGQ+ DEG
Sbjct: 475 DKTTFHGYD--QLLSETSRVTALFVDGASVQEMHPGQTGVVVLDHTPFYAESGGQVGDEG 532
Query: 357 FMIGVNDESQIELWFSSLVNLEGSKYALP-IFLQFSLSNLKKKKKLVKLLHTLSHTLRVG 415
+ +WF ++ ++ LP +F + L+VG
Sbjct: 533 TLKAAT------VWF----DVADTQKVLPEVFGHHGTLR--------------TGVLKVG 568
Query: 416 DKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
D + +D RR M NH+ATH+++ ALR VLG QKGSLV
Sbjct: 569 DAVAAEVDAVRRARTMRNHSATHLMHKALREVLGAHVQQKGSLV 612
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 2 LQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPE 61
L+ K G+ ++L G++A++L+DTYGFP+DLTQ + E + VD + DA Q E
Sbjct: 399 LKASGKDGKLRMLDGELAFKLHDTYGFPLDLTQDVCREHDMIVDEAAF-DAAMNRQREQA 457
Query: 62 SQAG 65
AG
Sbjct: 458 RAAG 461
>gi|205830265|sp|Q11IW3.2|SYA_MESSB RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
Length = 887
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 69/143 (48%), Gaps = 27/143 (18%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + V++ + G E ++ +++ FY E GGQ+ D G +E
Sbjct: 472 LVKDGAMVETAAEGEEVAVVTNQTPFYGESGGQVGDTG-------------------TIE 512
Query: 379 GSKYALPIFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTA 436
G +A+ I N +KK + V T+R+ + + L +D RR I +NH+A
Sbjct: 513 GEGFAIEI------KNTQKKGEGLFVHFGQVKKGTVRISEPVSLRVDHERRTRIRANHSA 566
Query: 437 THILNHALRFVLGPEADQKGSLV 459
TH+L+ ALR VLG QKGSLV
Sbjct: 567 THLLHEALREVLGTHVAQKGSLV 589
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 40/55 (72%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
+GE L G+ A++LYDTYGFP+DLTQ + ++G++VD+E + A ++ ++E +
Sbjct: 377 MGEGDRLDGETAFKLYDTYGFPLDLTQDALRQRGVTVDLEGFNAAMERQKAEARA 431
>gi|433676001|ref|ZP_20508165.1| alanyl-tRNA synthetase [Xanthomonas translucens pv. translucens DSM
18974]
gi|430818889|emb|CCP38424.1| alanyl-tRNA synthetase [Xanthomonas translucens pv. translucens DSM
18974]
Length = 630
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 68/141 (48%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + + V+S+ +G A +LLD++ FYAE GGQ+ D G + + Q+E
Sbjct: 226 LLKDGRPVESIEAGDAAIVLLDRTPFYAESGGQVGDLGQLSADSVLFQVEETQKFAGQFH 285
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
G LP S L+VG L +D+ARR + NH+ATH
Sbjct: 286 GHVGQLP-----------------------SGRLQVGATLSAQVDSARRGATILNHSATH 322
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ ALR VLG QKGSLV
Sbjct: 323 LLHAALREVLGTHVQQKGSLV 343
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 42/68 (61%), Gaps = 6/68 (8%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQAGMETSV 70
S +PG A+RLYDTYGFPVDLT + E+G+ VDM +E A ++ Q E AG
Sbjct: 136 SGSIPGADAFRLYDTYGFPVDLTADIARERGMDVDMAGFESAMER-QRETARAAG----- 189
Query: 71 EFCGGTHL 78
+F GGT L
Sbjct: 190 KFGGGTTL 197
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 30/44 (68%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMS 321
VV L + + V+S+ +G A +LLD++ FYAE GGQ+ D G +S
Sbjct: 223 VVALLKDGRPVESIEAGDAAIVLLDRTPFYAESGGQVGDLGQLS 266
>gi|425436678|ref|ZP_18817112.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9432]
gi|389678547|emb|CCH92589.1| Alanyl-tRNA synthetase [Microcystis aeruginosa PCC 9432]
Length = 874
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 70/134 (52%), Gaps = 24/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+S ++GTE ++LD++ FYAE GGQI D+G++ G N L+ +E +
Sbjct: 475 VESAAAGTEVQVVLDQTPFYAESGGQIGDKGYLTGDN----------LLIRVEDVQKESG 524
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
IF+ F + ++ +V GD + ID + RR +NHTATH+L AL+
Sbjct: 525 IFIHFG----RVERGIVT----------TGDTINAQIDRSCRRRAQANHTATHLLQSALK 570
Query: 446 FVLGPEADQKGSLV 459
++ Q GSLV
Sbjct: 571 KLVDGGISQAGSLV 584
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+L++I + +S++ G A+ LYDTYGFP++LTQ + EE+GLSVD +E KK Q
Sbjct: 368 LLESILEKEKSQI-SGVDAFTLYDTYGFPLELTQEIAEEQGLSVDTAGFEQEMKKQQQ-- 424
Query: 61 ESQAGMETSVEFCGGTHLAMAHHV 84
S+A ET G+ +A H+
Sbjct: 425 RSKAAHETIDLTVQGSLDKLAEHI 448
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/37 (51%), Positives = 29/37 (78%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
V+S ++GTE ++LD++ FYAE GGQI D+G++ G N
Sbjct: 475 VESAAAGTEVQVVLDQTPFYAESGGQIGDKGYLTGDN 511
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 276 GTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSS-GTE 334
TV + + V+S ++GTE ++LD++ FYAE GGQI D+G+++ + V E
Sbjct: 463 ATVTAVLVAGKTVESAAAGTEVQVVLDQTPFYAESGGQIGDKGYLTGDNLLIRVEDVQKE 522
Query: 335 AGILL 339
+GI +
Sbjct: 523 SGIFI 527
>gi|385341524|ref|YP_005895395.1| alanyl-tRNA synthetase [Neisseria meningitidis M01-240149]
gi|385857637|ref|YP_005904149.1| alanyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
gi|416186913|ref|ZP_11614020.1| alanyl-tRNA synthetase [Neisseria meningitidis M0579]
gi|325136739|gb|EGC59339.1| alanyl-tRNA synthetase [Neisseria meningitidis M0579]
gi|325201730|gb|ADY97184.1| alanyl-tRNA synthetase [Neisseria meningitidis M01-240149]
gi|325208526|gb|ADZ03978.1| alanyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
Length = 989
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 66/134 (49%), Gaps = 23/134 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+ ++ G E I++D + FYAE GGQ+ D G++ + ++ + K
Sbjct: 592 VNELNEGDEGAIVIDFTPFYAESGGQVGDVGYIFAGENRFEVR---------DTQKIKAA 642
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
+F QF + S L+VGD + +D R M NH+ATH+++ ALR
Sbjct: 643 VFGQFGVQT--------------SGRLKVGDSVTAKVDDEIRNANMRNHSATHLMHKALR 688
Query: 446 FVLGPEADQKGSLV 459
VLG +QKGSLV
Sbjct: 689 DVLGGHVEQKGSLV 702
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVD-------MEVYEDAKKKAQS 58
E+ L G+ ++LYDTYGFP DLT + E+ + +D ME + AQS
Sbjct: 499 ETLKLNGEHIFKLYDTYGFPYDLTADICRERNIELDEAGFEREMEAQRTRARAAQS 554
>gi|315635122|ref|ZP_07890400.1| alanine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
gi|315476084|gb|EFU66838.1| alanine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
Length = 874
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 77/154 (50%), Gaps = 32/154 (20%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
V+S+S+G A ++LD + FYAE GGQI D G LEG+ +
Sbjct: 479 VESISAGQSAVVILDNTPFYAESGGQIGDIG-------------------RLEGNGFC-- 517
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIMSNHTATHILNHAL 444
F + + +K ++ + L+ +L VG + +D RR+ I NH+ATH+L+ AL
Sbjct: 518 ----FDVKDTQKYGQVFGHIGELTQGSLSVGQSVNAVVDDVRRQRISLNHSATHLLHAAL 573
Query: 445 RFVLGPEADQKGSLV------YRYHLHENIMECE 472
R VLG QKGSLV + + HE I + +
Sbjct: 574 RQVLGEHVAQKGSLVSDTLLRFDFAQHEAISKAQ 607
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 46/67 (68%), Gaps = 3/67 (4%)
Query: 3 QTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK--KKAQSEP 60
+ +A + E+ VL G+VA++LYDTYGFP+DLT + E+G+++D +E ++ +++
Sbjct: 379 EALANVKEN-VLSGEVAFKLYDTYGFPLDLTADVCRERGIAIDEVGFEREMELQRVRAQS 437
Query: 61 ESQAGME 67
SQ GM+
Sbjct: 438 ASQFGMD 444
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 278 VVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQF 325
V L + V+S+S+G A ++LD + FYAE GGQI D G + F
Sbjct: 469 VTALFHEGNPVESISAGQSAVVILDNTPFYAESGGQIGDIGRLEGNGF 516
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 25/35 (71%)
Query: 237 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIG 271
V+S+S+G A ++LD + FYAE GGQI D G + G
Sbjct: 479 VESISAGQSAVVILDNTPFYAESGGQIGDIGRLEG 513
>gi|350571430|ref|ZP_08939757.1| alanine--tRNA ligase [Neisseria wadsworthii 9715]
gi|349792239|gb|EGZ46101.1| alanine--tRNA ligase [Neisseria wadsworthii 9715]
Length = 903
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 72/153 (47%), Gaps = 23/153 (15%)
Query: 307 YAEQGGQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQ 366
Y E+ + + + V+ ++ G ++LD + FYAE GGQ+ D G++ + +
Sbjct: 487 YTERKTEAKILALYKDSEPVNELNEGETGAVVLDNTPFYAESGGQVGDVGYIFAGENRFE 546
Query: 367 IELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTAR 426
+ + K +F QF + + S L+VGD + ID
Sbjct: 547 VH---------DTQKIKAAVFGQFGVVS--------------SGRLKVGDSVTAEIDNDI 583
Query: 427 RRPIMSNHTATHILNHALRFVLGPEADQKGSLV 459
R M NH+ATH+++ ALR VLG +QKGSLV
Sbjct: 584 RDANMRNHSATHLMHRALRDVLGSHVEQKGSLV 616
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 12 KVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE 50
K+L G++ ++LYDTYGFP DLT + E+G+ +D +E
Sbjct: 415 KMLDGEIIFKLYDTYGFPYDLTADICRERGIDMDEAGFE 453
>gi|349609681|ref|ZP_08889058.1| alanyl-tRNA synthetase [Neisseria sp. GT4A_CT1]
gi|348611249|gb|EGY60910.1| alanyl-tRNA synthetase [Neisseria sp. GT4A_CT1]
Length = 964
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 23/133 (17%)
Query: 326 VDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALP 385
VD + +G ++L+++ FYAE GGQ+ D GF++ + ++E + K
Sbjct: 567 VDELKAGEAGVVVLEQTPFYAESGGQVGDVGFIVSGENRFRVE---------DTQKIKAA 617
Query: 386 IFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALR 445
+ QF +S L+VGD + ID R IM NH+ TH+++ ALR
Sbjct: 618 VHGQFGA--------------VVSGRLKVGDAVSAEIDNDIRDSIMRNHSVTHLMHKALR 663
Query: 446 FVLGPEADQKGSL 458
VLG +QKGSL
Sbjct: 664 DVLGTHVEQKGSL 676
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 24/35 (68%)
Query: 13 VLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDME 47
V+ G+ ++LYDTYGFP DLT M E G+ +D E
Sbjct: 477 VIGGEHIFKLYDTYGFPYDLTADMARELGIDLDEE 511
>gi|326204671|ref|ZP_08194527.1| alanyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
gi|325985238|gb|EGD46078.1| alanyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
Length = 879
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 64/141 (45%), Gaps = 23/141 (16%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ + + VD+ G E ++LDK+ FYAE GGQ+ D G +I N +IE +
Sbjct: 474 IVKDGEIVDTAQEGDEITVILDKTPFYAEMGGQVGDSGALIAKNGVIKIE----NCTKTA 529
Query: 379 GSKYALPIFLQFSLSNLKKKKKLVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTATH 438
K+ F++ L + G + ID RR I NHT TH
Sbjct: 530 DGKFLHTGFVETGL-------------------VETGSTVTASIDEKRRTAINRNHTVTH 570
Query: 439 ILNHALRFVLGPEADQKGSLV 459
+L+ ALR VLG Q GSLV
Sbjct: 571 LLHKALRTVLGDHVHQAGSLV 591
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 39/52 (75%), Gaps = 3/52 (5%)
Query: 7 KLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYE---DAKKK 55
K + +V+PG++ ++L+DTYGFP+DLT+ + EE GL +D + ++ DA++K
Sbjct: 378 KAKKQEVIPGEMVFKLHDTYGFPLDLTREIAEENGLGIDEDGFKKEMDAQRK 429
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 37/74 (50%), Gaps = 9/74 (12%)
Query: 209 SDTGLGDLSQTKHTPFVKR---------LRFSYNKQFVDSVSSGTEAGILLDKSNFYAEQ 259
SD+ L +++ T FV L + + VD+ G E ++LDK+ FYAE
Sbjct: 444 SDSVFDKLDKSQKTAFVGYENIVCESVILYIVKDGEIVDTAQEGDEITVILDKTPFYAEM 503
Query: 260 GGQIYDEGFMIGVN 273
GGQ+ D G +I N
Sbjct: 504 GGQVGDSGALIAKN 517
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFVDSVSSGTE 334
E ++ + + + VD+ G E ++LDK+ FYAE GGQ+ D G + K V + + T+
Sbjct: 468 ESVILYIVKDGEIVDTAQEGDEITVILDKTPFYAEMGGQVGDSGALIAKNGVIKIENCTK 527
Query: 335 AG 336
Sbjct: 528 TA 529
>gi|417001134|ref|ZP_11941048.1| alanine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
gi|333975617|gb|EGL76496.1| alanine--tRNA ligase [Veillonella parvula ACS-068-V-Sch12]
Length = 871
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 107/236 (45%), Gaps = 35/236 (14%)
Query: 239 SVSSGTEAGILLDKSNFYAEQGGQIYDE-GFMIGVNDEGTVVGLRYNKQFVDSVSSGTEA 297
+V GTE L D F E +I E GF I + EG ++ ++ +A
Sbjct: 378 TVVPGTEVFKLYDTYGFPWELTEEIASERGFTI--DHEGFEAAMKEQRERAREARVKEDA 435
Query: 298 GILLDKSNFYAEQGGQIYDEGFMSNK--------QFVDSVSSGTEAGILLDKSNFYAEQG 349
+ F ++ + DE ++ + + + + G E +++ + F+AE G
Sbjct: 436 KVATPDITFLKDEE-LVEDEAETASSVLMLGKGSERLQTAADGDEITVIVRTTPFHAEGG 494
Query: 350 GQIYDEGFMIGVNDESQIELWFSSLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLS 409
GQ+ D GF++G ++E+ + + EG+ Y + ++ S+S
Sbjct: 495 GQLGDTGFIVGPM--GKVEVHNTKRLP-EGTVYHIGTVIEGSISE--------------- 536
Query: 410 HTLRVGDKLKLHIDTARRRPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
GD + L +DTARR + NHTATH+L+ AL+ VLG +Q GSLV +L
Sbjct: 537 -----GDDVTLEVDTARRSAMARNHTATHLLHAALKKVLGEHVNQAGSLVTPDYLR 587
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 34/48 (70%)
Query: 10 ESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQ 57
++ V+PG ++LYDTYGFP +LT+ + E+G ++D E +E A K+ +
Sbjct: 376 KATVVPGTEVFKLYDTYGFPWELTEEIASERGFTIDHEGFEAAMKEQR 423
>gi|29654361|ref|NP_820053.1| alanyl-tRNA synthetase [Coxiella burnetii RSA 493]
gi|154706669|ref|YP_001424370.1| alanyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
gi|41018200|sp|Q83CQ6.1|SYA_COXBU RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|205830040|sp|A9KG28.1|SYA_COXBN RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|29541628|gb|AAO90567.1| alanyl-tRNA synthetase [Coxiella burnetii RSA 493]
gi|154355955|gb|ABS77417.1| alanyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
Length = 865
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 27/142 (19%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ N Q ++ ++ + ++LD++ FYAE GGQ+ D+GF L+F +
Sbjct: 462 LLQNDQPINRLNESEKGVVVLDRTPFYAESGGQVGDQGF-----------LYFE-----K 505
Query: 379 GSKYALPIFLQFSLSNLKKKKKL-VKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
GS F + + KK+ + + + L L V DK++ +D +R IM NH+AT
Sbjct: 506 GS---------FRVKDTKKQGDIYLHIGEMLQGHLNVKDKVRAEVDVSRF-DIMRNHSAT 555
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H+L+ ALR VLG QKGSLV
Sbjct: 556 HLLHEALRRVLGERVMQKGSLV 577
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
S+ +PG++ ++LYDTYGFP DLT + E+ +D ++ A ++ Q E QA
Sbjct: 376 SRQIPGNLIFQLYDTYGFPPDLTADIARERDFVMDYAGFDKAMER-QREQSQQA 428
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
+N + V+ L N Q ++ ++ + ++LD++ FYAE GGQ+ D+GF+
Sbjct: 453 LNSQANVISLLQNDQPINRLNESEKGVVVLDRTPFYAESGGQVGDQGFL 501
>gi|423329816|ref|ZP_17307622.1| alanyl-tRNA synthetase [Myroides odoratimimus CCUG 3837]
gi|404602724|gb|EKB02411.1| alanyl-tRNA synthetase [Myroides odoratimimus CCUG 3837]
Length = 875
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 28/154 (18%)
Query: 313 QIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFS 372
Q+ +E ++ + +DS G I+LD + FY E GGQ+ D G ++ ND Q+
Sbjct: 472 QLENEVKITRYRKIDSKKDGKLFQIVLDATPFYPEGGGQVGDTGVLVSANDTIQV----- 526
Query: 373 SLVNLEGSKYALPIFLQFSLSNLKKKKKLVKLLHTLSH-TLRVGDKLKLHIDTARRRPIM 431
+ KK+ L+ LH + V L +D R+ M
Sbjct: 527 --------------------IDTKKENNLI--LHIVRELPANVEGTLVAKVDVDARKQSM 564
Query: 432 SNHTATHILNHALRFVLGPEADQKGSLVYRYHLH 465
+NH+ATH+L+ ALR +LG +QKGSLV HL
Sbjct: 565 ANHSATHLLHQALRTILGTHVEQKGSLVAPTHLR 598
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 1 MLQTIAKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEP 60
+L + K E KV+ G A+ LYDT+GFP+DLT L++ EKG +D ++ A + +
Sbjct: 386 LLDNVIKQTEGKVVSGVKAFELYDTFGFPIDLTALILREKGYELDEAGFDAA--MLEQKT 443
Query: 61 ESQAGMETSVE 71
S+A E S +
Sbjct: 444 RSRAASEVSTD 454
>gi|49475765|ref|YP_033806.1| alanyl-tRNA synthetase [Bartonella henselae str. Houston-1]
gi|59798532|sp|Q6G2Z4.1|SYA_BARHE RecName: Full=Alanine--tRNA ligase; AltName: Full=Alanyl-tRNA
synthetase; Short=AlaRS
gi|49238572|emb|CAF27813.1| Alanyl-tRNA synthetase [Bartonella henselae str. Houston-1]
Length = 887
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 71/144 (49%), Gaps = 27/144 (18%)
Query: 318 GFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNL 377
+ + + VD +SSG +A ++++++ FY E GGQI D G + G N
Sbjct: 471 ALVRDGEIVDDISSGQKAILVVNQTPFYGESGGQIGDSGTISGKN--------------- 515
Query: 378 EGSKYALPIFLQFSLSNLKKKKK--LVKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHT 435
F + + +KK + + S R+ + ++L +D RR+ I NH+
Sbjct: 516 ----------FVFEVHDTQKKADGVFIHIGEVKSGQARMSECVELTVDGVRRKKIRVNHS 565
Query: 436 ATHILNHALRFVLGPEADQKGSLV 459
ATH+L+ ALR VLG QKGSLV
Sbjct: 566 ATHLLHEALRQVLGSHVTQKGSLV 589
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 8 LGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAK--KKAQSEPESQAG 65
L E L G++A++LYDTYGFP+DLTQ + +G+SVD+ + A +KA++
Sbjct: 377 LKEGDHLNGEIAFKLYDTYGFPLDLTQDALRCRGISVDVAAFNKAMEGQKAKARANWSGS 436
Query: 66 METSVE 71
ET E
Sbjct: 437 GETVTE 442
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 275 EGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMSNKQFV 326
EG + L + + VD +SSG +A ++++++ FY E GGQI D G +S K FV
Sbjct: 466 EGILTALVRDGEIVDDISSGQKAILVVNQTPFYGESGGQIGDSGTISGKNFV 517
Score = 38.5 bits (88), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 235 QFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVN 273
+ VD +SSG +A ++++++ FY E GGQI D G + G N
Sbjct: 477 EIVDDISSGQKAILVVNQTPFYGESGGQIGDSGTISGKN 515
>gi|408378033|ref|ZP_11175632.1| alanyl-tRNA ligase [Agrobacterium albertimagni AOL15]
gi|407748147|gb|EKF59664.1| alanyl-tRNA ligase [Agrobacterium albertimagni AOL15]
Length = 885
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 80/161 (49%), Gaps = 33/161 (20%)
Query: 312 GQIYDEGFMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWF 371
GQ+ + + + ++ S+G E I+++++ FY E GGQ+ D G ++G
Sbjct: 467 GQVL--AVVKDGKVIEQASAGEEVQIVVNQTPFYGESGGQMGDTGEIVG----------- 513
Query: 372 SSLVNLEGSKYALPIFLQFSLSNLKKKKK----LVKLLHTLSHTLRVGDKLKLHIDTARR 427
EG FSL+ +KK V + + ++ G ++L++D ARR
Sbjct: 514 ------EG----------FSLAVNDTQKKGEGVFVHVATVQNGVVKAGGAVQLNVDHARR 557
Query: 428 RPIMSNHTATHILNHALRFVLGPEADQKGSLVYRYHLHENI 468
+ SNH+ATH+L+ ALR VLG QKGSLV L +I
Sbjct: 558 SRLRSNHSATHLLHEALREVLGTHVAQKGSLVAPERLRFDI 598
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 6 AKLGESKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPES 62
A L + L G+ A++LYDTYGFP+DLTQ + +G+ VD+ + DA ++ ++E +
Sbjct: 375 ATLDKGDSLDGETAFKLYDTYGFPLDLTQDALRGRGIGVDLTGFNDAMQRQKAEARA 431
>gi|153206762|ref|ZP_01945603.1| alanyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
gi|165918516|ref|ZP_02218602.1| alanyl-tRNA synthetase [Coxiella burnetii Q321]
gi|212218396|ref|YP_002305183.1| alanyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
gi|120577125|gb|EAX33749.1| alanyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
gi|165917762|gb|EDR36366.1| alanyl-tRNA synthetase [Coxiella burnetii Q321]
gi|212012658|gb|ACJ20038.1| alanyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
Length = 865
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 75/142 (52%), Gaps = 27/142 (19%)
Query: 319 FMSNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFMIGVNDESQIELWFSSLVNLE 378
+ N Q ++ ++ + ++LD++ FYAE GGQ+ D+GF L+F +
Sbjct: 462 LLQNDQPINRLNESEKGVVVLDRTPFYAESGGQVGDQGF-----------LYFE-----K 505
Query: 379 GSKYALPIFLQFSLSNLKKKKKL-VKLLHTLSHTLRVGDKLKLHIDTARRRPIMSNHTAT 437
GS F + + KK+ + + + L L V DK++ +D +R IM NH+AT
Sbjct: 506 GS---------FRVKDTKKQGDIYLHIGEMLQGHLNVKDKVRAEVDVSRF-DIMRNHSAT 555
Query: 438 HILNHALRFVLGPEADQKGSLV 459
H+L+ ALR VLG QKGSLV
Sbjct: 556 HLLHEALRRVLGERVMQKGSLV 577
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 11 SKVLPGDVAWRLYDTYGFPVDLTQLMVEEKGLSVDMEVYEDAKKKAQSEPESQA 64
S+ +PG++ ++LYDTYGFP DLT + E+ +D ++ A ++ Q E QA
Sbjct: 376 SRQIPGNLIFQLYDTYGFPPDLTADIARERDFVMDYAGFDKAMER-QREQSQQA 428
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 32/49 (65%)
Query: 272 VNDEGTVVGLRYNKQFVDSVSSGTEAGILLDKSNFYAEQGGQIYDEGFM 320
+N + V+ L N Q ++ ++ + ++LD++ FYAE GGQ+ D+GF+
Sbjct: 453 LNSQANVISLLQNDQPINRLNESEKGVVVLDRTPFYAESGGQVGDQGFL 501
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,649,022,080
Number of Sequences: 23463169
Number of extensions: 336432005
Number of successful extensions: 835231
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5207
Number of HSP's successfully gapped in prelim test: 161
Number of HSP's that attempted gapping in prelim test: 803881
Number of HSP's gapped (non-prelim): 27605
length of query: 474
length of database: 8,064,228,071
effective HSP length: 146
effective length of query: 328
effective length of database: 8,933,572,693
effective search space: 2930211843304
effective search space used: 2930211843304
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)