Query psy16320
Match_columns 214
No_of_seqs 148 out of 162
Neff 5.6
Searched_HMMs 29240
Date Fri Aug 16 18:23:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16320.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16320hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4ag4_A Epithelial discoidin do 100.0 9.7E-68 3.3E-72 481.4 17.4 198 9-213 142-342 (351)
2 3f2z_A Uncharacterized protein 98.7 8.9E-08 3E-12 75.9 10.1 117 73-212 28-147 (159)
3 3ggl_A Putative chitobiase; X- 98.7 1.2E-07 3.9E-12 76.4 10.3 117 73-212 38-157 (169)
4 2j1a_A Hyaluronidase, CBM32; p 98.6 2E-07 6.8E-12 71.6 10.1 90 114-211 52-149 (150)
5 4a41_A GH89_CBM32-5, alpha-N-a 98.6 1.6E-07 5.6E-12 75.2 9.8 114 73-210 45-159 (161)
6 2jda_A Yecbm32; hypothetical p 98.3 6.7E-06 2.3E-10 63.1 11.2 90 115-212 44-135 (145)
7 2v72_A CBM32, EXO-alpha-sialid 98.3 4.4E-06 1.5E-10 63.7 9.1 90 114-211 52-142 (143)
8 4a42_A GH89_CBM32-4, alpha-N-a 98.0 3E-05 1E-09 61.4 9.9 83 116-211 64-147 (149)
9 1w8o_A Bacterial sialidase; 3D 98.0 3.3E-05 1.1E-09 72.4 11.4 90 114-212 505-599 (601)
10 1k3i_A Galactose oxidase precu 98.0 6.8E-05 2.3E-09 71.0 12.9 92 114-212 69-164 (656)
11 3hnm_A Putative chitobiase; PS 98.0 2.4E-05 8.2E-10 64.0 8.4 112 75-209 41-161 (172)
12 4a3z_A GH89_CBM32, alpha-N-ace 97.7 0.00019 6.3E-09 57.9 8.9 89 114-212 66-161 (161)
13 4gz9_A Neuropilin-1, A5 protei 97.6 7.5E-05 2.6E-09 71.0 6.8 88 100-196 452-548 (577)
14 1sdd_B Coagulation factor V; c 97.6 0.00023 7.7E-09 68.4 10.0 147 17-197 474-629 (647)
15 1tvg_A LOC51668 protein; cell 97.5 0.0026 8.8E-08 51.1 13.3 86 114-212 56-145 (153)
16 2yc2_A IFT25, intraflagellar t 97.4 0.0015 5.3E-08 51.1 10.7 85 114-211 48-136 (139)
17 3lei_A Platelet aggregation fa 97.3 0.0008 2.7E-08 53.0 8.4 87 115-212 55-145 (153)
18 2qqo_A Neuropilin-2; VEGF rece 97.3 0.00017 5.7E-09 66.5 4.5 75 117-198 347-436 (460)
19 2qqk_A Neuropilin-2; VEGF rece 97.2 0.00027 9.3E-09 66.8 5.2 76 116-198 465-555 (579)
20 3eyp_A Putative alpha-L-fucosi 97.2 0.0038 1.3E-07 58.4 12.5 91 114-212 365-455 (469)
21 4gwi_A Lectinolysin, platelet 97.1 0.0013 4.4E-08 52.5 7.7 91 114-212 54-145 (153)
22 2w1s_A Hyaluronoglucosaminidas 97.0 0.0061 2.1E-07 50.3 10.8 92 115-210 66-160 (192)
23 2v5d_A O-GLCNACASE NAGJ; famil 96.9 0.0053 1.8E-07 60.2 11.2 90 114-211 639-736 (737)
24 4a4a_A Alpha-N-acetylglucosami 96.5 0.0092 3.1E-07 60.1 9.8 88 115-212 63-152 (914)
25 3bn6_A Lactadherin; anticoagul 96.5 0.018 6.3E-07 45.4 9.7 79 115-198 58-144 (158)
26 3ues_A Alpha-1,3/4-fucosidase; 96.4 0.021 7E-07 53.6 11.0 86 114-210 390-475 (478)
27 2j1v_A Fucolectin-related prot 96.2 0.018 6E-07 45.5 8.1 89 114-212 60-149 (151)
28 2wuh_A Discoidin domain recept 96.1 0.024 8.3E-07 46.0 8.6 78 117-198 75-158 (178)
29 1czt_A Protein (coagulation fa 96.1 0.051 1.7E-06 43.0 10.0 78 116-198 58-143 (160)
30 1k12_A Lectin; beta barrel, pr 95.9 0.018 6.2E-07 45.6 6.6 90 115-212 59-152 (158)
31 3hny_M Coagulation factor VIII 95.7 0.081 2.8E-06 41.9 9.7 76 117-197 61-142 (159)
32 2cho_A Glucosaminidase, hexosa 95.6 0.0076 2.6E-07 59.2 4.0 83 115-213 629-714 (716)
33 2vm9_A Discoidin-2, discoidin 95.4 0.08 2.7E-06 45.4 9.4 75 117-198 63-140 (257)
34 3cqo_A FBP32; F-lectin, fucole 95.3 0.018 6.2E-07 49.6 5.0 89 114-212 196-289 (293)
35 2j22_A Fucolectin-related prot 95.2 0.067 2.3E-06 42.1 7.8 87 115-212 58-146 (148)
36 4deq_A Neuropilin-1, vascular 95.1 0.17 5.8E-06 42.6 10.4 77 117-197 57-140 (218)
37 3cqo_A FBP32; F-lectin, fucole 95.1 0.04 1.4E-06 47.4 6.7 93 115-212 51-145 (293)
38 2qqi_A Neuropilin-1; VEGF rece 95.0 0.052 1.8E-06 47.4 7.1 79 115-198 215-300 (318)
39 2qqj_A Neuropilin-2; VEGF rece 94.8 0.16 5.6E-06 44.3 9.9 75 116-197 217-306 (325)
40 1jhj_A APC10; beta sandwich, j 94.3 0.42 1.4E-05 39.0 10.4 98 72-198 38-142 (171)
41 2qqi_A Neuropilin-1; VEGF rece 94.2 0.23 8E-06 43.2 9.4 79 116-198 57-142 (318)
42 2qqm_A Neuropilin-1; VEGF rece 93.9 0.13 4.3E-06 46.9 7.4 79 115-198 347-432 (450)
43 2qqj_A Neuropilin-2; VEGF rece 93.8 0.46 1.6E-05 41.4 10.4 78 117-198 59-143 (325)
44 2wn3_A Discoidin-1 subunit A; 92.6 0.72 2.5E-05 39.4 9.6 84 100-197 50-138 (254)
45 4ag4_A Epithelial discoidin do 92.2 0.53 1.8E-05 42.4 8.6 77 117-197 62-144 (351)
46 2r7e_B Coagulation factor VIII 92.1 0.099 3.4E-06 51.6 4.0 78 116-198 667-750 (770)
47 2qqm_A Neuropilin-1; VEGF rece 90.6 0.8 2.7E-05 41.6 8.2 79 116-198 189-274 (450)
48 2yfu_A Carbohydrate binding fa 90.6 0.48 1.6E-05 37.9 5.9 89 114-211 44-137 (155)
49 2zxq_A Endo-alpha-N-acetylgala 89.2 0.072 2.5E-06 55.5 0.0 90 115-211 1272-1372(1376)
50 1sdd_B Coagulation factor V; c 88.5 2.7 9.2E-05 40.0 10.4 79 116-198 385-470 (647)
51 1gqp_A DOC1/APC10; cell cycle, 88.0 3.4 0.00011 35.1 9.5 114 57-197 52-174 (221)
52 2qqo_A Neuropilin-2; VEGF rece 85.7 5.3 0.00018 36.2 10.3 78 117-198 188-272 (460)
53 2qqk_A Neuropilin-2; VEGF rece 85.4 4.4 0.00015 37.9 9.8 77 117-197 307-390 (579)
54 4aqs_A Laminin subunit beta-1; 85.3 1.6 5.4E-05 40.5 6.7 43 113-161 102-145 (525)
55 4gz9_A Neuropilin-1, A5 protei 83.5 5.9 0.0002 37.2 9.8 75 117-197 308-391 (577)
56 2y38_A Laminin subunit alpha-5 78.7 4 0.00014 37.4 6.6 43 114-161 107-150 (403)
57 3gza_A Putative alpha-L-fucosi 73.4 22 0.00074 32.8 10.1 84 115-210 356-439 (443)
58 2r7e_B Coagulation factor VIII 68.9 5 0.00017 39.5 4.9 82 116-202 508-597 (770)
59 4deq_A Neuropilin-1, vascular 68.9 1 3.5E-05 37.7 0.1 17 16-32 144-161 (218)
60 3gdb_A Endo-D, putative unchar 67.7 1.1 3.8E-05 45.3 0.0 100 74-199 821-926 (937)
61 2wn3_A Discoidin-1 subunit A; 67.1 2.4 8.2E-05 36.1 2.0 14 17-30 143-157 (254)
62 3m1h_A Lysine specific cystein 63.4 59 0.002 26.3 11.3 80 130-212 81-177 (178)
63 3zyj_B Netrin-G1; cell adhesio 56.0 24 0.00083 32.5 6.8 42 114-161 131-174 (426)
64 2vm9_A Discoidin-2, discoidin 54.2 2.3 7.7E-05 36.2 -0.4 19 16-38 143-162 (257)
65 4aqt_A Laminin subunit gamma-1 51.4 25 0.00086 31.6 6.0 43 113-161 100-143 (375)
66 2w47_A Lipolytic enzyme, G-D-S 49.7 79 0.0027 23.7 11.8 102 99-213 29-131 (144)
67 3km5_A Lysine specific cystein 47.7 1.1E+02 0.0038 24.7 8.8 35 178-213 143-179 (180)
68 3tbd_A Netrin-G2, laminet-2; l 44.1 51 0.0017 29.4 6.7 43 113-161 102-146 (338)
69 2ijr_A Hypothetical protein AP 25.4 13 0.00045 32.7 -0.3 48 73-125 182-230 (300)
70 1uxz_A Cellulase B; carbohydra 22.6 2.3E+02 0.0079 20.7 8.9 20 194-213 111-130 (131)
71 4djb_A E4-ORF3; adenovirus pro 22.4 34 0.0012 26.3 1.5 13 11-23 10-22 (130)
No 1
>4ag4_A Epithelial discoidin domain-containing receptor 1; immune system-transferase complex; HET: NAG; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.7e-68 Score=481.36 Aligned_cols=198 Identities=34% Similarity=0.545 Sum_probs=185.6
Q ss_pred ccccCCCceeeEEee-CCCccCCceEEEeCCCCCcccccCCCCCCCCeeeEeecccCccccccccCcceeeecccccCCC
Q psy16320 9 ADEEQNPGKVHFLLG-ADEEQNQGLVSYTMPQGEVKTFDSHSAHSSSLDLTDKTYDGVVEDGLLSGGLGQLTDGQIGADN 87 (214)
Q Consensus 9 ~~~~~~p~~~~~~l~-~GC~w~dglvsYs~P~G~~~~~~~~~~~g~~~~l~D~tYDG~~~~~~l~gGlGqLtDGi~G~dn 87 (214)
+|.+-+.+..|||+| |||.|.||+++|+||+|+++.++ .+++|+|+||||++++++|.|||||||||++|+||
T Consensus 142 ~P~~w~~~~i~LRvELyGC~~~dg~~sy~~P~g~~~~~~------~~~~~~D~~YDG~~~~~~l~~GLGqLtDg~~g~~~ 215 (351)
T 4ag4_A 142 YPRADRVMSVCLRVELYGCLWRDGLLSYTAPVGQTMYLS------EAVYLNDSTYDGHTVGGLQYGGLGQLADGVVGLDD 215 (351)
T ss_dssp EEECSSSCCCCBEEEEEEEECCSCEEEEEEECCCEECSS------SCEECSCTTCCSEEETTEEESCCCGGGSSCCCCSS
T ss_pred EEEEccCCceEEEEEEeccccccCccccCCCchhhhcCC------CCceeEecccCCcccCceecCceeecccCCccCCc
Confidence 555555678999999 99999999999999999998544 25899999999999999999999999999999999
Q ss_pred c-cccccCCCCCcceEEeecCCCCCCCcEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCC-cccccccee
Q psy16320 88 F-KMDAKSRNKGYEWIGWRNESFPYGKPVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGG-RQFSLEPIQ 165 (214)
Q Consensus 88 f-~~~~~~~~~g~~WVGW~n~~~~~~~~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG-~~f~~~~~~ 165 (214)
| .+.++++|+|++||||+|++++ +++|||+|||+++|||++|+|||||+|+++|++|++|+|+||.+| +.|+++|+.
T Consensus 216 f~~~~~~~~~~~~~~VGW~~~~~~-~~~vei~FeFd~~RnFt~~~ih~~n~~~~~v~~f~~~~~~Fs~~~~~~~~~~p~~ 294 (351)
T 4ag4_A 216 FRKSQELRVWPGYDYVGWSNHSFS-SGYVEMEFEFDRLRAFQAMQVHCNNMHTLGARLPGGVECRFRRGPAMAWEGEPMR 294 (351)
T ss_dssp TTSCSSSSCCTTTTCEEEEGGGCT-TSEEEEEEEEEEEEEEEEEEEEECCCGGGTBCCCSEEEEEEECSSSSSCSSSCEE
T ss_pred ccccccccccCCCceeeeccCCCC-CCCEEEEEEeCcEEEEEEEEEEecccccccceeeeEEEEEEECCCCccccCCceE
Confidence 9 5556789999999999999887 889999999999999999999999999999999999999999996 589999999
Q ss_pred eecCCCcccccceEEEEeCCCceeeEEEEEEEcCCeeEEEEEEEEEec
Q psy16320 166 FTYMPDTIMEKARNVTIKLHHKQAKYLKLQMYFSNKWLLISEIMFQSV 213 (214)
Q Consensus 166 ~~~~~d~~~~~ar~vti~l~~r~ar~VKi~l~fa~~Wl~iSEI~F~S~ 213 (214)
+++++|..+++||+|+|||++|+||||||+|+||+.|||||||+|+|+
T Consensus 295 ~~~~~d~~~~~ar~v~i~l~~r~~~~vk~~~~f~~~Wll~SEi~F~s~ 342 (351)
T 4ag4_A 295 HNLGGNLGDPRARAVSVPLGGRVARFLQCRFLFAGPWLLFSEISFISD 342 (351)
T ss_dssp EECSSCCSCCSCEEEEEEEEEEEEEEEEEEEECSSSEEEEEEEEEEEE
T ss_pred eecCCCcCCCccceEEEeCCCcceeEEEEEEEcCCceEEEEEEEEccC
Confidence 999999999999999999999999999999999999999999999996
No 2
>3f2z_A Uncharacterized protein BF3579; the present C-terminal domain is predominantly composed of B strands., structural genomics, PSI-2; 1.30A {Bacteroides fragilis} PDB: 2kd7_A
Probab=98.70 E-value=8.9e-08 Score=75.95 Aligned_cols=117 Identities=16% Similarity=0.216 Sum_probs=80.1
Q ss_pred CcceeeecccccCCCccccccCCCCCcceEEeecCCCCCCCcEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEE
Q psy16320 73 GGLGQLTDGQIGADNFKMDAKSRNKGYEWIGWRNESFPYGKPVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYL 152 (214)
Q Consensus 73 gGlGqLtDGi~G~dnf~~~~~~~~~g~~WVGW~n~~~~~~~~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~f 152 (214)
|....|+||..++ -|++ . |.... . ..+..|+|||++++.|+.|.+...+.. +...+++.+|++
T Consensus 28 g~~~~a~DG~~~T-~W~s---------~---~~~~~-~-~~p~~i~vDLg~~~~i~~v~~~~~~~~--~~~~~~~~~I~~ 90 (159)
T 3f2z_A 28 GHAKHLIDGNIET-FWHS---------R---WQGGS-D-PLPYEIIIDMNHRVKIAQIELLPRGRG--SNNPIKVVRFEA 90 (159)
T ss_dssp BSGGGGSSSCTTC-CEEC---------C---CTTCC-C-CSCEEEEEEEEEEEEEEEEEEEECCTT--CCCCCCEEEEEE
T ss_pred CcHHhcCCCCCCC-eEEc---------C---CcCCC-C-CCCEEEEEECCCceEEEEEEEEecCCC--CCCCeeEEEEEE
Confidence 4466799997753 2333 1 22110 0 235899999999999999998664432 245688999999
Q ss_pred EeCCccccccceeeecCCCcccccceEEEEeCCCceeeEEEEEEEcC---CeeEEEEEEEEEe
Q psy16320 153 SLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLHHKQAKYLKLQMYFS---NKWLLISEIMFQS 212 (214)
Q Consensus 153 S~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~~r~ar~VKi~l~fa---~~Wl~iSEI~F~S 212 (214)
|.||++|+..... +.... ...+. +.+....||||||++.-. ..|+-|+||.+-.
T Consensus 91 S~Dg~~W~~v~~~-~~~~~---~~~~~--~~~~~~~aRYVRi~~~~~~~~~~~~si~Ei~vy~ 147 (159)
T 3f2z_A 91 SEDGTNWESIGQF-GFTNQ---DAALK--YYVKSSTARYIKLVIPDGVGNGTVAAIRELDVRG 147 (159)
T ss_dssp ESSSSSCEEEEEE-ECCCC---SSCEE--ECCCCEEEEEEEEEECSSSSCCSCCEEEEEEEEE
T ss_pred EcCCCCeEEeEEe-ecCCC---CccEE--EecCCceEEEEEEEEEeccCCCceEEEEEEEEEc
Confidence 9999999875432 11111 22333 456788999999999875 2599999999854
No 3
>3ggl_A Putative chitobiase; X-RAY, structure genomics, NESG, BTR324A, Q8A9F0_bactn, BT_0865, PSI-2, protein structure initiative; 3.00A {Bacteroides thetaiotaomicron}
Probab=98.68 E-value=1.2e-07 Score=76.37 Aligned_cols=117 Identities=14% Similarity=0.153 Sum_probs=80.9
Q ss_pred CcceeeecccccCCCccccccCCCCCcceEEeecCCCCCCCcEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEE
Q psy16320 73 GGLGQLTDGQIGADNFKMDAKSRNKGYEWIGWRNESFPYGKPVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYL 152 (214)
Q Consensus 73 gGlGqLtDGi~G~dnf~~~~~~~~~g~~WVGW~n~~~~~~~~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~f 152 (214)
|-...|+||..++ .|++ . |..... ..+..|+|||++++.|+.|.+...++- +...+++.+|++
T Consensus 38 g~~~~a~DG~~~T-~W~s---------~---~~~~~~--~~p~wi~vDLg~~~~i~~v~~~~r~~~--~~~~~~~y~I~~ 100 (169)
T 3ggl_A 38 GLAKCLIDGDTET-FWHA---------K---WQGGSD--PLPYDIVIDMKQNIQIAQVELLPRGRG--SNNPIKVVEFAA 100 (169)
T ss_dssp BSGGGGGSSCSSC-CEEC---------C---CSSCCC--CSCEEEEEEEEEEEEEEEEEEEECCTT--CCCCCCEEEEEE
T ss_pred CcHHhcCCCCCCC-ceEc---------c---CcCCCC--CCCEEEEEECCCcEEEeEEEEEecCCC--CCCCeeEEEEEE
Confidence 4466799998754 2333 2 322110 235899999999999999998654432 245789999999
Q ss_pred EeCCccccccceeeecCCCcccccceEEEEeCCCceeeEEEEEEEcCC---eeEEEEEEEEEe
Q psy16320 153 SLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLHHKQAKYLKLQMYFSN---KWLLISEIMFQS 212 (214)
Q Consensus 153 S~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~~r~ar~VKi~l~fa~---~Wl~iSEI~F~S 212 (214)
|.||++|+..... +.... ...+. +.+....||||||++.-.. .|+-|.||.+-.
T Consensus 101 S~Dg~~W~~v~~~-~~~~~---~~~~~--~~f~~~~aRYVRi~~~~~~~~~~~~si~Ei~vy~ 157 (169)
T 3ggl_A 101 SEDNVNWTPIGRF-GFTNQ---DAALE--YYVKSIKARYIRLTIPDDGGNSTVAAIRELDVKG 157 (169)
T ss_dssp ESSSSCCEEEEEE-ECCCC---SSCEE--ECCCCEEEEEEEEEECSSSSCCSCCEEEEEEEEE
T ss_pred eCCCCCcEEeEEE-EeccC---CCcEE--EEecCceEEEEEEEEEeCCCCCceEEEEEEEEEc
Confidence 9999999875432 11111 22233 4567889999999998752 599999999854
No 4
>2j1a_A Hyaluronidase, CBM32; protein-carbohydrate interaction, glycoside hydrolase, GH84C, hydrolase; HET: GAL; 1.49A {Clostridium perfringens} PDB: 2j1e_A* 2j7m_A*
Probab=98.64 E-value=2e-07 Score=71.58 Aligned_cols=90 Identities=18% Similarity=0.218 Sum_probs=65.6
Q ss_pred cEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccceeeecCCCcccccceEEEEeCCCceeeEEE
Q psy16320 114 PVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLHHKQAKYLK 193 (214)
Q Consensus 114 ~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~~r~ar~VK 193 (214)
+..|+|||++++.++.|.+...... .-..+++.+|++|.||++|...... +.. .....+.+.++ ...|||||
T Consensus 52 ~~~l~iDLg~~~~i~~v~~~~~~~~--~~~~~~~~~i~~S~Dg~~w~~v~~~-~~~---~~~~~~~~~~~--~~~aryvR 123 (150)
T 2j1a_A 52 PHHLTLELDNVYEINKVKYAPRQDS--KNGRITGYKVSVSLDGENFTEVKTG-TLE---DNAAIKFIEFD--SVDAKYVR 123 (150)
T ss_dssp CCEEEEEEEEEEEEEEEEEECCSSC--CTTEEEEEEEEEESSSSSEEEEEEE-ECC---SSSSCEEEEEE--EEEEEEEE
T ss_pred CeEEEEECCCCeEEeEEEEeecCCC--CCCCEEEEEEEEEcCCCceEEEEEe-eEC---CCCceEEEEEC--CeEEEEEE
Confidence 5789999999999999999654332 1235788999999999999864321 111 11233555555 67899999
Q ss_pred EEEEc--------CCeeEEEEEEEEE
Q psy16320 194 LQMYF--------SNKWLLISEIMFQ 211 (214)
Q Consensus 194 i~l~f--------a~~Wl~iSEI~F~ 211 (214)
|.+.- .+.|+-|.||.+-
T Consensus 124 i~~~~~~~~~~~~~~~~~~i~Ei~v~ 149 (150)
T 2j1a_A 124 LDVTDSVSDQANGRGKFATAAEVNVH 149 (150)
T ss_dssp EEEEEEECCC--CTTTCCEESEEEEE
T ss_pred EEEEecccccccCCCceEEEEEEEEe
Confidence 99983 3579999999874
No 5
>4a41_A GH89_CBM32-5, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: GAL; 1.55A {Clostridium perfringens} PDB: 4a44_A* 4a45_A* 4aax_A*
Probab=98.63 E-value=1.6e-07 Score=75.21 Aligned_cols=114 Identities=11% Similarity=0.071 Sum_probs=78.1
Q ss_pred CcceeeecccccCCCccccccCCCCCcceEEeecCCCCCCCcEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEE
Q psy16320 73 GGLGQLTDGQIGADNFKMDAKSRNKGYEWIGWRNESFPYGKPVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYL 152 (214)
Q Consensus 73 gGlGqLtDGi~G~dnf~~~~~~~~~g~~WVGW~n~~~~~~~~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~f 152 (214)
+....|+||..++. |++ .|.... ..+..|+|||++++.|+.|.+...+.. +-..+++.+|++
T Consensus 45 ~~~~~a~DG~~~T~-W~s------------~~~~~~---~~p~~i~iDLg~~~~I~~v~~~~r~~~--~~~~~~~y~I~~ 106 (161)
T 4a41_A 45 GLAKFAIDGKENTI-WHT------------KYNPVE---ELPQSITLELGGSYEINKFTYLPRSGA--KNGNITKYELHV 106 (161)
T ss_dssp CCGGGGGSSCTTCC-EEC------------CTTTTC---CSCEEEEEEEEEEEEEEEEEEECCSSC--CTTCEEEEEEEE
T ss_pred CcHHHcCcCCCCCe-EEe------------CCCCCC---CCCEEEEEEcCCCEEEeEEEEEecCCC--CCCcEEEEEEEE
Confidence 45667999987542 333 122111 235899999999999999988654432 234688999999
Q ss_pred EeCCccccccceeeecCCCcccccceEEEEeCCCceeeEEEEEEEc-CCeeEEEEEEEE
Q psy16320 153 SLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLHHKQAKYLKLQMYF-SNKWLLISEIMF 210 (214)
Q Consensus 153 S~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~~r~ar~VKi~l~f-a~~Wl~iSEI~F 210 (214)
|.||++|+..... +.. .+...+.+.++ ...||||||.+.- .+.|+-|.||.+
T Consensus 107 S~DG~~W~~v~~g-~~~---~~~~~~~~~f~--~v~aRYVRi~~~~~~~~~~si~E~~V 159 (161)
T 4a41_A 107 SEDGNNFRKISEG-NWD---DSGSLKTLKFN--STKATHVKLVALEGVGGFASAAELNV 159 (161)
T ss_dssp ESSSSCEEEEEEE-ECC---SSSSCEEEEEE--EEEEEEEEEEEEEEGGGCCEESEEEE
T ss_pred ECCCCceEEeeee-eec---CCCcEEEEEeC--CceEEEEEEEEEEccCCeEEeEeEEE
Confidence 9999999875322 111 12234555555 6899999999875 355999999986
No 6
>2jda_A Yecbm32; hypothetical protein, carbohydrate- binding module, sugar-binding protein, pectin, plant cell WALL, galacturonic acid; 1.35A {Yersinia enterocolitica} PDB: 2jd9_A
Probab=98.31 E-value=6.7e-06 Score=63.06 Aligned_cols=90 Identities=17% Similarity=0.258 Sum_probs=64.8
Q ss_pred EEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccceeeecCCCcccccceEEEEeCCCceeeEEEE
Q psy16320 115 VEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLHHKQAKYLKL 194 (214)
Q Consensus 115 VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~~r~ar~VKi 194 (214)
..|++||++++.++.|.+...+.. ..+++.+|++|.||++|........ .... ....+.+ .|....||||||
T Consensus 44 ~~l~vDLg~~~~v~~v~i~~~~~~----~~~~~~~i~~S~Dg~~w~~~~~~~~-~~~~-~~~~~~~--~f~~~~aryvRi 115 (145)
T 2jda_A 44 SWVQLELDKEQSIENILIVPFKPT----ERKLKFSIFYSNDGKNWQPLAEGLE-TSSA-DKNGEKL--TFTPVTAKYIKL 115 (145)
T ss_dssp EEEEEEEEEEEEEEEEEEEESSTT----TCCEEEEEEEESSSSSCEEEEEEEE-CCCS-CSSCEEE--EEEEEEEEEEEE
T ss_pred eeEEEECCCceEEEEEEEEeccCC----CceEEEEEEEeCCCCceEEeeeCcc-ccCC-CCccEEE--EeCcccEEEEEE
Confidence 579999999999999999986431 2477889999999999976533211 1111 1122344 446789999999
Q ss_pred EEEcC--CeeEEEEEEEEEe
Q psy16320 195 QMYFS--NKWLLISEIMFQS 212 (214)
Q Consensus 195 ~l~fa--~~Wl~iSEI~F~S 212 (214)
.+.-. +.|+-|.||.+-.
T Consensus 116 ~~~~~~~~~~~~i~Ei~v~g 135 (145)
T 2jda_A 116 DTFGTDVNNWSAINEIAINS 135 (145)
T ss_dssp EEEEESSSSEEEEEEEEESC
T ss_pred EEECCCCCcEeEEEEEEEEC
Confidence 99864 4699999999854
No 7
>2v72_A CBM32, EXO-alpha-sialidase; galactose, bacterial pathogen, carbohydrate-binding module, sugar-binding protein; HET: GAL; 2.25A {Clostridium perfringens}
Probab=98.26 E-value=4.4e-06 Score=63.72 Aligned_cols=90 Identities=11% Similarity=0.138 Sum_probs=62.2
Q ss_pred cEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccceeeecCCCcccccceEEEEeCCCceeeEEE
Q psy16320 114 PVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLHHKQAKYLK 193 (214)
Q Consensus 114 ~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~~r~ar~VK 193 (214)
+..|+|||++++.++.|.+...+... -..+++.+|++|.||++ +. + +.-..+. ....+.+.++ ....|||||
T Consensus 52 ~~~l~vDLg~~~~i~~v~~~~~~~~~--~~~~~~~~i~~S~Dg~~-~~--v-~~g~~~~-~~~~~~~~f~-~p~~aRyvR 123 (143)
T 2v72_A 52 PQSLSVNLGKARKVSSIAITPRTSGN--NGFITKYEIHAINNGVE-TL--V-AEGTWEE-NNLVKTVTFD-SPIDAEEIK 123 (143)
T ss_dssp CEEEEEEEEEEEEEEEEEEECCSSCC--TTCEEEEEEEEEETTEE-EE--E-EEEECCS-SSSCEEEEEE-EEEEEEEEE
T ss_pred CEEEEEECCCCeEEeEEEEEecccCC--CCCEEEEEEEEEcCCCc-cE--E-eEEEEcC-CCceEEEEeC-CCCcEEEEE
Confidence 58899999999999999998755431 12478899999999987 32 2 1111111 1223334433 136899999
Q ss_pred EEEEcC-CeeEEEEEEEEE
Q psy16320 194 LQMYFS-NKWLLISEIMFQ 211 (214)
Q Consensus 194 i~l~fa-~~Wl~iSEI~F~ 211 (214)
|.+.-. +.|+.|+||.+-
T Consensus 124 i~~~~~~~~~~~i~Ei~v~ 142 (143)
T 2v72_A 124 ITAIQGVGGFASIAELNVY 142 (143)
T ss_dssp EEEEEEGGGCCEESEEEEE
T ss_pred EEEEEcCCCeEEEEEEEEE
Confidence 999864 469999999874
No 8
>4a42_A GH89_CBM32-4, alpha-N-acetylglucosaminidase family protein; hydrolase, family 89 glycoside hydrolase, family 32 carbohyd binding module; HET: MSE; 1.55A {Clostridium perfringens}
Probab=98.04 E-value=3e-05 Score=61.40 Aligned_cols=83 Identities=12% Similarity=0.174 Sum_probs=60.0
Q ss_pred EEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccceeeecCCCcccccceEEEEeC-CCceeeEEEE
Q psy16320 116 EMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPIQFTYMPDTIMEKARNVTIKL-HHKQAKYLKL 194 (214)
Q Consensus 116 eitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l-~~r~ar~VKi 194 (214)
.+++||++++.|+.|.+... +.+ .++.+|++|.||++|+.....-... ......++.| ....||||||
T Consensus 64 ~~~VDLg~~~~V~~v~i~~~---r~~---v~~y~I~~S~DG~~W~~~~~~g~~~-----~~~~~~~~~f~~pv~aRYVRi 132 (149)
T 4a42_A 64 SVTFDLSKEKDISAIDIVSK---GNS---PLKYSIEISNDGTEWTKIVDENNNE-----ENKAVYSNILKSGKIGRFVRF 132 (149)
T ss_dssp EEEEEEEEEEECCEEEEEEC---SSS---CCCEEEEEESSSSSCEEEEEETTCC-----CCCSEEEEECCTTCEEEEEEE
T ss_pred eEEEECCCcEEEEEEEEEcC---CCC---cEEEEEEEEcCCCeEeEeEEcceeC-----CCCceEEEEcCCCceEEEEEE
Confidence 45999999999999999653 233 5677899999999997531111111 1123456666 5679999999
Q ss_pred EEEcCCeeEEEEEEEEE
Q psy16320 195 QMYFSNKWLLISEIMFQ 211 (214)
Q Consensus 195 ~l~fa~~Wl~iSEI~F~ 211 (214)
++.-+ |+-|.||.+-
T Consensus 133 ~~~~~--~~si~E~~Vy 147 (149)
T 4a42_A 133 NFNSE--NVKIGEIKIY 147 (149)
T ss_dssp EECSS--SCCEEEEEEE
T ss_pred EEecC--CcEEEEEEEE
Confidence 99766 9999999864
No 9
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=98.02 E-value=3.3e-05 Score=72.40 Aligned_cols=90 Identities=12% Similarity=0.290 Sum_probs=66.4
Q ss_pred cEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccc-cce-eeecCCCcccccceEEEEeCCCceeeE
Q psy16320 114 PVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSL-EPI-QFTYMPDTIMEKARNVTIKLHHKQAKY 191 (214)
Q Consensus 114 ~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~-~~~-~~~~~~d~~~~~ar~vti~l~~r~ar~ 191 (214)
+..|+|||++++.|+.|.+...+.. .-..+++.+|+.|.||++|+. ... .+ ..+ ...+.+.++ ...|||
T Consensus 505 ~~~i~vDLg~~~~i~~v~~~~r~~~--~~~~~~~y~i~~S~Dg~~w~~~v~~~~~--~~~---~~~~~~~f~--~~~aRy 575 (601)
T 1w8o_A 505 PHRISLDLGGTHTISGLQYTRRQNS--ANEQVADYEIYTSLNGTTWDGPVASGRF--TTS---LAPQRAVFP--ARDARY 575 (601)
T ss_dssp CEEEEEEEEEEEEEEEEEEEECSSC--STTCBCEEEEEEESSSSSCEEEEEEEEC--CSC---SSCEEEEEE--EEEEEE
T ss_pred CeEEEEECCCcEEEeEEEEecCCCC--CCCceEEEEEEEECCCCccceeeeeEEE--cCC---CceEEEEeC--CcceEE
Confidence 5899999999999999999654332 223578999999999999985 322 12 111 233455554 688999
Q ss_pred EEEEEEcC---CeeEEEEEEEEEe
Q psy16320 192 LKLQMYFS---NKWLLISEIMFQS 212 (214)
Q Consensus 192 VKi~l~fa---~~Wl~iSEI~F~S 212 (214)
|||++.-. ..|+.|+||.+-.
T Consensus 576 vRi~~~~~~~~~~~~~i~Ei~v~g 599 (601)
T 1w8o_A 576 IRLVALSEQTGHKYAAVAELEVEG 599 (601)
T ss_dssp EEEEECCBTTSCSCCEEEEEEEEE
T ss_pred EEEEEEEcCCCCceEEEEEEEEEe
Confidence 99999863 4699999999864
No 10
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.98 E-value=6.8e-05 Score=70.99 Aligned_cols=92 Identities=16% Similarity=0.273 Sum_probs=66.9
Q ss_pred cEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccc-cccceeeecCCCcccccceEEEEeCCCceeeEE
Q psy16320 114 PVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQF-SLEPIQFTYMPDTIMEKARNVTIKLHHKQAKYL 192 (214)
Q Consensus 114 ~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f-~~~~~~~~~~~d~~~~~ar~vti~l~~r~ar~V 192 (214)
+-.|+|||++++.++.|.+...+...... .+++.+|+.|.||++| +.... .+... +...+.+.+ ....||||
T Consensus 69 ~~~l~vDLg~~~~i~~v~~~~~~~~~~~~-~~~~y~i~~S~Dg~~w~~~v~~-~~~~~---~~~~~~~~~--~~~~aRyv 141 (656)
T 1k3i_A 69 PHTYTIDMKTTQNVNGLSMLPRQDGNQNG-WIGRHEVYLSSDGTNWGSPVAS-GSWFA---DSTTKYSNF--ETRPARYV 141 (656)
T ss_dssp CEEEEEEEEEEEEEEEEEEECCCSSCCTT-CBCEEEEEEESSSSCCCSCSEE-EECCS---SSSCEEEEE--EEEEEEEE
T ss_pred CceEEecCCCcEEEEEEEEEecccCCCCC-CeeEEEEEEECCCCCcceeeee-eeecC---CCcceeeec--CCcceEEE
Confidence 58899999999999999998765443222 4889999999999999 54332 11111 222344444 47889999
Q ss_pred EEEEEcC---CeeEEEEEEEEEe
Q psy16320 193 KLQMYFS---NKWLLISEIMFQS 212 (214)
Q Consensus 193 Ki~l~fa---~~Wl~iSEI~F~S 212 (214)
|+++.-. ..|+-++||.+-.
T Consensus 142 Ri~~~~~~~~~~~~si~E~~v~~ 164 (656)
T 1k3i_A 142 RLVAITEANGQPWTSIAEINVFQ 164 (656)
T ss_dssp EEEECSBTTSCSCCEESEEEEEE
T ss_pred EEEEecccccCCceeEEEEEEee
Confidence 9999874 3699999998753
No 11
>3hnm_A Putative chitobiase; PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, BTR319D.BT_411; 3.00A {Bacteroides thetaiotaomicron}
Probab=97.97 E-value=2.4e-05 Score=64.05 Aligned_cols=112 Identities=15% Similarity=0.199 Sum_probs=72.6
Q ss_pred ceeeecccccCCCccccccCCCCCcceEEeecCCCCCCCcEEEEEEcCceEEEeEEEEEEecccC----CceeeeeEEEE
Q psy16320 75 LGQLTDGQIGADNFKMDAKSRNKGYEWIGWRNESFPYGKPVEMVFEFDRVRNFTAMHLHINNYYS----KDIQVFSHANV 150 (214)
Q Consensus 75 lGqLtDGi~G~dnf~~~~~~~~~g~~WVGW~n~~~~~~~~VeitFeF~~~rnfs~v~ih~~n~~~----~~V~~f~~v~v 150 (214)
.-.|+||..++ -|++ .| .... .-+-.|+|||+++.+++.+.+..-+... .+ .+++.+|
T Consensus 41 ~~~liDgn~~T-~Wht---------~w---~~~~---~~P~~itIDLg~~~~v~~~~~~~r~~~~~~~~~g--~ik~~~I 102 (172)
T 3hnm_A 41 VESLIDNNPGT-QWLC---------RW---DVKE---PLPYYFVFDMGKEYTLFRFGFANPVAPAAHVWAG--TSKAGYV 102 (172)
T ss_dssp GGGGSSSCTTS-CEEC---------CC---SSCC---CSCEEEEEEEEEEEEEEEEEEECCCSSCTTSTTC--CEEEEEE
T ss_pred HHHcCCCCCCC-eEEe---------cC---CCCC---CCCEEEEEECCCceEEeEEEEEecCCCCcccCCC--CeEEEEE
Confidence 55799998752 2344 22 2211 2358999999999999999988765432 23 5999999
Q ss_pred EEEeCCccccccceeeecCCCcccccceEEEEeCCCceeeEEEEEEEcC-----CeeEEEEEEE
Q psy16320 151 YLSLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLHHKQAKYLKLQMYFS-----NKWLLISEIM 209 (214)
Q Consensus 151 ~fS~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~~r~ar~VKi~l~fa-----~~Wl~iSEI~ 209 (214)
+.|.||++|+.... .+...+. .. .+.+.+....|||||+++.-+ +--+-|.||-
T Consensus 103 ~~S~Dg~~W~~v~~-~~~~~~~--~~--~~~~~~~~~~aRYIR~~v~~g~~~~~~~rv~~~e~~ 161 (172)
T 3hnm_A 103 EASIDNENWVKLKD-WTSPKIG--EP--NVNMDVPATQARYIRFVITDTYPTYDGLRVSLGEVY 161 (172)
T ss_dssp EEESSSSCEEEEEC-CBCSSTT--CS--CEEEEEEEEEEEEEEEEEEEECCCTTSSCCEECEEE
T ss_pred EEEeCCCCeEEeEE-EEecCCC--Cc--eEEeecCCCceEEEEEEEccCcccccceEEEhhHhh
Confidence 99999999986432 2112211 11 223334567899999988752 4555666653
No 12
>4a3z_A GH89_CBM32, alpha-N-acetylglucosaminidase family protein; hydrolase, family 32 carbohydrate-binding module; HET: MSE; 1.55A {Clostridium perfringens} PDB: 4a6o_A*
Probab=97.67 E-value=0.00019 Score=57.95 Aligned_cols=89 Identities=13% Similarity=0.113 Sum_probs=62.1
Q ss_pred cEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccceeeecCCCcccccceEEEEeCCCceeeEEE
Q psy16320 114 PVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLHHKQAKYLK 193 (214)
Q Consensus 114 ~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~~r~ar~VK 193 (214)
+--|++||++++.|+.|.|...... ...+.+|..|.||++|+...... .... ...+.++++. ...|||||
T Consensus 66 ~~Wi~VDLg~~~~v~~v~i~~~~~~-----~~~~y~IevS~Dg~~W~~v~~~t---~~~~-~~~~~~~~~~-~~~aRYVR 135 (161)
T 4a3z_A 66 PANATIDLEGNNFVDFLELHFEKEG-----FRFQFKVEVEDESGNRETVLDMT---SNTE-DNKKSYNIPV-KKEISKIH 135 (161)
T ss_dssp SEEEEEEEEEEEEEEEEEEECSSTT-----CCEEEEEEEECTTCCEEEEEECT---TCCS-CCCSEEEEEE-EEEEEEEE
T ss_pred CeEEEEECCCcEEEeEEEEEECCCC-----ceEEEEEEEEcCCCCEEEEEEec---CCCC-CccEEEEcCC-CcEEEEEE
Confidence 4679999999999999999753322 23567899999999997532221 1111 1223444443 57899999
Q ss_pred EEEEcC--C-----eeEEEEEEEEEe
Q psy16320 194 LQMYFS--N-----KWLLISEIMFQS 212 (214)
Q Consensus 194 i~l~fa--~-----~Wl~iSEI~F~S 212 (214)
|.+.-. . .|.=|.||.+-|
T Consensus 136 v~~~~~~~~g~~~~~~~si~E~~V~s 161 (161)
T 4a3z_A 136 ATITGKAPGGSFDQAWAAIAEIKAMS 161 (161)
T ss_dssp EEEEEECSCSTTTTCCCEESEEEEEC
T ss_pred EEEEecCCCccccCCCCEEEEEEEeC
Confidence 999864 2 789999998765
No 13
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=97.62 E-value=7.5e-05 Score=71.05 Aligned_cols=88 Identities=5% Similarity=-0.002 Sum_probs=51.2
Q ss_pred ceEEeecCCCCCCCcEEEEEEcCceEEEeEEEEEEec--ccCCceeeeeEEEEEEEeCCccccccc-------eeeecCC
Q psy16320 100 EWIGWRNESFPYGKPVEMVFEFDRVRNFTAMHLHINN--YYSKDIQVFSHANVYLSLGGRQFSLEP-------IQFTYMP 170 (214)
Q Consensus 100 ~WVGW~n~~~~~~~~VeitFeF~~~rnfs~v~ih~~n--~~~~~V~~f~~v~v~fS~dG~~f~~~~-------~~~~~~~ 170 (214)
.|..|.++....+. =|.+||++++.++.|.+-=.. ....|| ++..|.+|.||.+|.... .+|.--.
T Consensus 452 ~w~~~~~~~~~~~q--wLqVDLg~~~~VtgV~tQG~~~~~~~~~v---tsY~l~yS~Dg~~W~~~~~~~~~~~kvF~GN~ 526 (577)
T 4gz9_A 452 GWALPPSPHPYTNE--WLQVDLGDEKIVRGVIIQGGKHRENKVFM---RKFKIAYSNNGSDWKTIMDDSKRKAKSFEGNN 526 (577)
T ss_dssp CEEECCCSSCCCSC--CEEEEEEEEEEEEEEEEECEESSSCEECE---EEEEEEEESSSSSCEECBCTTSSSBCCEECCS
T ss_pred CcccccCCCCCCCc--eEEEECCCcEEEEEEEEeCCCCCCcceeE---EEEEEEEECCCCCeEEEEcCCCCceEEeeCcc
Confidence 57777654311012 267899999999999873221 222354 455899999999996432 1232111
Q ss_pred CcccccceEEEEeCCCceeeEEEEEE
Q psy16320 171 DTIMEKARNVTIKLHHKQAKYLKLQM 196 (214)
Q Consensus 171 d~~~~~ar~vti~l~~r~ar~VKi~l 196 (214)
|. ..+ ++..|.+-.||||||.-
T Consensus 527 d~--~t~--v~~~~~Pi~ARyvRi~P 548 (577)
T 4gz9_A 527 NY--DTP--ELRTFSPLSTRFIRIYP 548 (577)
T ss_dssp SS--SCC--EEEEEEEEEEEEEEEEE
T ss_pred CC--Cee--EEeecCCEEEEEEEEEE
Confidence 21 122 22223356899999974
No 14
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=97.61 E-value=0.00023 Score=68.37 Aligned_cols=147 Identities=13% Similarity=0.083 Sum_probs=79.6
Q ss_pred eeeEEee-CCCccCCceEEEeCCCCCcccccCCCCCCCCeeeEeecccCccccccccCcceeeecccccCCCccccccCC
Q psy16320 17 KVHFLLG-ADEEQNQGLVSYTMPQGEVKTFDSHSAHSSSLDLTDKTYDGVVEDGLLSGGLGQLTDGQIGADNFKMDAKSR 95 (214)
Q Consensus 17 ~~~~~l~-~GC~w~dglvsYs~P~G~~~~~~~~~~~g~~~~l~D~tYDG~~~~~~l~gGlGqLtDGi~G~dnf~~~~~~~ 95 (214)
..|||+| |||.... ++.|.|...... .+..+..+|+..........-..+.|.|. |
T Consensus 474 ~~~lr~ElyGc~~~~----c~~plGmesg~I------~d~~itASS~~~~~~~~~~~p~~arL~~~--g----------- 530 (647)
T 1sdd_B 474 KPALRLELQGCEVNG----CSTPLGMESGKI------ENKQITASSFKKSWWGNYWEPFLARLNAQ--G----------- 530 (647)
T ss_dssp SCEEEEEEEEECTTS----CCSBCSTTTSSS------CSTTEEESCCCEETTTEECCGGGCBSSCC--S-----------
T ss_pred cceeeeccccccccc----cccccCccCCcc------CCCceeeccccccccccccCccccccccC--C-----------
Confidence 5799998 9998532 566776432000 01245666664321111112223344331 0
Q ss_pred CCCcceEEeecCCCCCCCcEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccce-------eeec
Q psy16320 96 NKGYEWIGWRNESFPYGKPVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPI-------QFTY 168 (214)
Q Consensus 96 ~~g~~WVGW~n~~~~~~~~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~-------~~~~ 168 (214)
....|....++. +. -|.+||+++++|+.|.+.-...... -+.-++.++.+|.||++|..... .|+-
T Consensus 531 -~~~~W~a~~~~~---~q--wLqVDLg~~~~vt~v~tqg~~~~~~-~~~v~~y~l~~S~dg~~W~~~~~~~~~~~~~F~G 603 (647)
T 1sdd_B 531 -RVNAWQAKANNN---NQ--WLQIDLLKIKKITAIVTQGCKSLSS-EMYVKSYTIHYSDQGTDWKPYREKSSMVDKIFEG 603 (647)
T ss_dssp -SSCSEECSSCSS---CC--CEEEEEEEEEEEEEEEEECEEETTE-EEEEEEECEEEESSSSCCEECCCSSCSSCCCEEC
T ss_pred -CcccccCCCCCC---Cc--EEEEeCCCceEEEEEEeecCCCCCC-CcceEEEEEEEECCCCcEEEEEcCCCcceeeeec
Confidence 113677766653 22 3677999999999998755433211 12335667999999999975432 2211
Q ss_pred CCCcccccceEEEEeC-CCceeeEEEEEEE
Q psy16320 169 MPDTIMEKARNVTIKL-HHKQAKYLKLQMY 197 (214)
Q Consensus 169 ~~d~~~~~ar~vti~l-~~r~ar~VKi~l~ 197 (214)
-.|.. .. ++..| ..-.||||||...
T Consensus 604 N~d~~--~~--~~~~l~~pi~ARyvRi~p~ 629 (647)
T 1sdd_B 604 NNNVR--GH--VKNFFNPPIISRFIRIIPK 629 (647)
T ss_dssp CSSSS--CC--EEEEEEEEEEEEEEEECCC
T ss_pred cCCCC--ce--EEEeCCCcEEEEEEEEEEE
Confidence 11211 22 22233 2467999998754
No 15
>1tvg_A LOC51668 protein; cell cycle, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Homo sapiens} SCOP: b.18.1.9 PDB: 1xpw_A
Probab=97.50 E-value=0.0026 Score=51.05 Aligned_cols=86 Identities=13% Similarity=0.185 Sum_probs=64.1
Q ss_pred cEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCc--cccccce-eeecCCCcccccceEEEEeCCCceee
Q psy16320 114 PVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGR--QFSLEPI-QFTYMPDTIMEKARNVTIKLHHKQAK 190 (214)
Q Consensus 114 ~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~--~f~~~~~-~~~~~~d~~~~~ar~vti~l~~r~ar 190 (214)
+-+|+|+|++..+++.+.+-+.+ .+..+++.|.||+ +|+.... .+ ... . ...+.+.+++ ...||
T Consensus 56 Pq~i~Idf~k~~~is~~~i~~~~--------vk~~~ie~s~d~~p~~w~~i~e~ef--~~~-~-n~~Q~~~~~~-~~~a~ 122 (153)
T 1tvg_A 56 PQEFIICFHKHVRIERLVIQSYF--------VQTLKIEKSTSKEPVDFEQWIEKDL--VHT-E-GQLQNEEIVA-HGSAT 122 (153)
T ss_dssp SEEEEEEEEEEEEEEEEEEEEES--------EEEEEEEEECSSSSCCCEEEEEEEC--CCC-T-TCCEEEEECC-CEEEE
T ss_pred CcEEEEECCCceEEEEEEEEecC--------CEEEEEEEECCCCCcceEEeEEEEe--cCC-C-CcEEEEEcCC-CceeE
Confidence 58999999999999999999853 5778899999998 8976533 23 121 2 2367788887 66799
Q ss_pred EEEEEEEcC-CeeEEEEEEEEEe
Q psy16320 191 YLKLQMYFS-NKWLLISEIMFQS 212 (214)
Q Consensus 191 ~VKi~l~fa-~~Wl~iSEI~F~S 212 (214)
|||+.+.-+ +.-+-|=||.+..
T Consensus 123 ~lRl~i~s~~d~fv~Iy~l~v~G 145 (153)
T 1tvg_A 123 YLRFIIVSAFDHFASVHSVSAEG 145 (153)
T ss_dssp EEEEEEEEESSSCCEEEEEEEEE
T ss_pred EEEEEEEcccccEEEEEEEEEEE
Confidence 999999853 5556666666643
No 16
>2yc2_A IFT25, intraflagellar transport protein 25; transport protein, cilium, IFT complex; 2.59A {Chlamydomonas reinhardtii} PDB: 2yc4_A
Probab=97.40 E-value=0.0015 Score=51.08 Aligned_cols=85 Identities=14% Similarity=0.167 Sum_probs=60.9
Q ss_pred cEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCC--ccccccce-eeecCCCcccccceEEEEeCCCceee
Q psy16320 114 PVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGG--RQFSLEPI-QFTYMPDTIMEKARNVTIKLHHKQAK 190 (214)
Q Consensus 114 ~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG--~~f~~~~~-~~~~~~d~~~~~ar~vti~l~~r~ar 190 (214)
+=+|+|+|.+..+++.+.+.+.+ ++.++++.|.|| ++|+.... .+. ..+ + ..+.+.+++..+ ||
T Consensus 48 pq~i~I~~~~~~~is~~~i~~~~--------~k~~~ie~s~~~~p~~w~~i~~~~f~-~~~--~-~~q~~~f~~~~~-a~ 114 (139)
T 2yc2_A 48 PQEFVLRLESCIRVSKITTLSLN--------VRKLAVEKCDQDKPDQFEKVFEVELA-NRG--D-RLQTEVHQVNIR-AK 114 (139)
T ss_dssp CEEEEEEEEEEEEEEEEEEEEES--------EEEEEEEEECSSSCCCCEEEEEEECC-CC-----CCEEEEEEEEEE-EE
T ss_pred CeEEEEECCCceEEEEEEEEecC--------CcEEEEEEecCCCCCceEEEEEEEee-cCC--C-CceEEEccCCCc-EE
Confidence 57999999999999999998753 788899999998 68976532 331 112 2 456666776544 99
Q ss_pred EEEEEEEcC-CeeEEEEEEEEE
Q psy16320 191 YLKLQMYFS-NKWLLISEIMFQ 211 (214)
Q Consensus 191 ~VKi~l~fa-~~Wl~iSEI~F~ 211 (214)
|||+++.-+ +.-+-|=||.+.
T Consensus 115 ~lrl~i~s~~d~f~~iy~~~v~ 136 (139)
T 2yc2_A 115 YLKFILLQGHGEFATVNRVSVV 136 (139)
T ss_dssp EEEEEEEEESSSCCEEEEEEEE
T ss_pred EEEEEEEeccCceEEEEEEEEE
Confidence 999999853 445666666554
No 17
>3lei_A Platelet aggregation factor SM-HPAF; lectin domain of lectinolysin, fucose, blood clotting, nicke; HET: FUC; 1.90A {Streptococcus mitis} PDB: 3leg_A* 3le0_A* 3lek_A*
Probab=97.34 E-value=0.0008 Score=53.03 Aligned_cols=87 Identities=16% Similarity=0.241 Sum_probs=61.2
Q ss_pred EEEEEEcCceEEEeEEEEEEeccc---CCceeeeeEEEEEEEe-CCccccccceeeecCCCcccccceEEEEeCCCceee
Q psy16320 115 VEMVFEFDRVRNFTAMHLHINNYY---SKDIQVFSHANVYLSL-GGRQFSLEPIQFTYMPDTIMEKARNVTIKLHHKQAK 190 (214)
Q Consensus 115 VeitFeF~~~rnfs~v~ih~~n~~---~~~V~~f~~v~v~fS~-dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~~r~ar 190 (214)
--+.+||++++.|++|.| .+... ...+ +..+|.+|. ||.+|... .. .. . .....+++.+....||
T Consensus 55 ~W~~VDLg~~~~v~~V~i-~~~~d~~~~~r~---~~~~I~vs~~dg~~w~~~--~~---~~-~-~~~~~~~~~~~~~~~R 123 (153)
T 3lei_A 55 AWWQVDLGKTENVGKVKL-YNRGDGNVANRL---SNFDVVLLNEAKQEVARQ--HF---DS-L-NGKAELEVFFTAKDAR 123 (153)
T ss_dssp CEEEEEEEEEEEEEEEEE-EECCSTTCGGGS---CSEEEEEECTTCCEEEEE--EE---SC-C-TTCSEEEEEEEEEEEE
T ss_pred CeEEEECCCceEEeEEEE-EeCCCCcccccc---eeEEEEEECCCCCccccc--ee---ec-C-CCCCeEEEEeCCeEEE
Confidence 568899999999999999 54332 2222 345777875 78888653 11 11 1 1224567777778999
Q ss_pred EEEEEEEcCCeeEEEEEEEEEe
Q psy16320 191 YLKLQMYFSNKWLLISEIMFQS 212 (214)
Q Consensus 191 ~VKi~l~fa~~Wl~iSEI~F~S 212 (214)
||||++.-...++=|.||.+-.
T Consensus 124 YVri~~~~~~~~~sl~EveVyg 145 (153)
T 3lei_A 124 YVKVELKTKNTPLSLAEVEVFR 145 (153)
T ss_dssp EEEEEECSTTBCCCEEEEEEEE
T ss_pred EEEEEeeCCCCcEEEEEEEEEc
Confidence 9999998877899999998754
No 18
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=97.30 E-value=0.00017 Score=66.47 Aligned_cols=75 Identities=9% Similarity=0.083 Sum_probs=48.4
Q ss_pred EEEEcCceEEEeEEEEEEec--------ccCCceeeeeEEEEEEEeCCccccccce-------eeecCCCcccccceEEE
Q psy16320 117 MVFEFDRVRNFTAMHLHINN--------YYSKDIQVFSHANVYLSLGGRQFSLEPI-------QFTYMPDTIMEKARNVT 181 (214)
Q Consensus 117 itFeF~~~rnfs~v~ih~~n--------~~~~~V~~f~~v~v~fS~dG~~f~~~~~-------~~~~~~d~~~~~ar~vt 181 (214)
|.+||++++.++.|.+.-.. ....||. +-.+.+|.||++|..... .|.--.|. ..+ ++
T Consensus 347 LqVDLg~~~~Vt~V~tqG~~~~~~~~~~~~~~~v~---~Y~l~yS~dg~~W~~~~~~~~~~~~vF~GN~d~--~~~--v~ 419 (460)
T 2qqo_A 347 LQVDLGTPKTVKGVIIQGARGGDSITAVEARAFVR---KFKVSYSLNGKDWEYIQDPRTQQPKLFEGNMHY--DTP--DI 419 (460)
T ss_dssp EEEEEEEEEEEEEEEEECCCCC--CCCGGGCCCEE---EEEEEEESSSSSCEECEETTTTEECCEECCSSS--SSC--EE
T ss_pred EEEcCCCceEEEEEEecCCCCCCCccccccceeEE---EEEEEEEeCCCceEEEECCCCCccceeccccCC--Cce--ee
Confidence 67899999999999987654 2334554 568999999999975321 12111111 111 23
Q ss_pred EeCCCceeeEEEEEEEc
Q psy16320 182 IKLHHKQAKYLKLQMYF 198 (214)
Q Consensus 182 i~l~~r~ar~VKi~l~f 198 (214)
..|.+..||||||.-.-
T Consensus 420 ~~l~pi~aRyvRi~p~~ 436 (460)
T 2qqo_A 420 RRFDPIPAQYVRVYPER 436 (460)
T ss_dssp EEEEEEEEEEEEEEEEE
T ss_pred eeeCceEEEEEEEEeCe
Confidence 33446789999998753
No 19
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=97.22 E-value=0.00027 Score=66.79 Aligned_cols=76 Identities=9% Similarity=0.056 Sum_probs=48.4
Q ss_pred EEEEEcCceEEEeEEEEEEec--------ccCCceeeeeEEEEEEEeCCccccccce-------eeecCCCcccccceEE
Q psy16320 116 EMVFEFDRVRNFTAMHLHINN--------YYSKDIQVFSHANVYLSLGGRQFSLEPI-------QFTYMPDTIMEKARNV 180 (214)
Q Consensus 116 eitFeF~~~rnfs~v~ih~~n--------~~~~~V~~f~~v~v~fS~dG~~f~~~~~-------~~~~~~d~~~~~ar~v 180 (214)
=|.+||++++.++.|.+.-.. ....|| ++-.+.+|.||++|..... .|.--.|. ..+ +
T Consensus 465 wLqVDLg~~~~Vt~V~tqG~~~~~~~~~~~~~~~v---~~Y~l~~S~dg~~W~~~~~~~~~~~~vf~GN~d~--~t~--~ 537 (579)
T 2qqk_A 465 WLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFV---RKFKVSYSLNGKDWEYIQDPRTQQPKLFEGNMHY--DTP--D 537 (579)
T ss_dssp CEEEEEEEEEEEEEEEEECBC---------CCBCE---EEEEEEEESSSSCCEECBCTTTSSBCCEECCSSS--SSC--E
T ss_pred eEEEecCCceEEEEEEeCCCCCCCCccccccceee---EEEEEEEEcCCCceeEEEcCCCCceeeeeCccCC--CCc--c
Confidence 377899999999999987644 233455 4568999999999975321 12111111 111 2
Q ss_pred EEeCCCceeeEEEEEEEc
Q psy16320 181 TIKLHHKQAKYLKLQMYF 198 (214)
Q Consensus 181 ti~l~~r~ar~VKi~l~f 198 (214)
+..|.+..||||||.-.-
T Consensus 538 ~~~l~pi~aRyVRi~p~~ 555 (579)
T 2qqk_A 538 IRRFDPIPAQYVRVYPER 555 (579)
T ss_dssp EEEEEEEEEEEEEEEEEE
T ss_pred ccccCceEEEEEEEEcce
Confidence 233346789999998653
No 20
>3eyp_A Putative alpha-L-fucosidase; structural genomics, hydrolase, lipoprotein, PSI-2, protein initiative; 1.90A {Bacteroides thetaiotaomicron}
Probab=97.19 E-value=0.0038 Score=58.42 Aligned_cols=91 Identities=11% Similarity=0.137 Sum_probs=66.2
Q ss_pred cEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccceeeecCCCcccccceEEEEeCCCceeeEEE
Q psy16320 114 PVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLHHKQAKYLK 193 (214)
Q Consensus 114 ~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~~r~ar~VK 193 (214)
.-.|++||++++.|+.|.|.-.-..+.+|+- -+|..|.||+.|+......+ +......|.++++ ...|||||
T Consensus 365 ~~wl~vDLg~~~~vn~V~lqe~i~~gqrv~~---y~Ve~s~DG~~W~~v~~gt~---~~tiG~kr~~~f~--~v~aryVR 436 (469)
T 3eyp_A 365 KADIIFTLPKTIEFDCLMIEEVIELGHRTTK---WSVEYTVDGKNWITIPEATD---KQAIGHKWIVRLA--PVKAKQVR 436 (469)
T ss_dssp CEEEEEEEEEEEEEEEEEEEECGGGCSCEEE---EEEEEESSSSCCEECGGGSS---BCCCTTCEEEEEE--EEEEEEEE
T ss_pred CcEEEEECCCCcEEeEEEEeecccCCCCeEE---EEEEEEcCCCceEEEEeccc---ccCCCceeEEecC--CeeEEEEE
Confidence 4679999999999999999754444555544 47889999999976433211 1112223666665 78999999
Q ss_pred EEEEcCCeeEEEEEEEEEe
Q psy16320 194 LQMYFSNKWLLISEIMFQS 212 (214)
Q Consensus 194 i~l~fa~~Wl~iSEI~F~S 212 (214)
|++.-+..+..|+||..-.
T Consensus 437 l~i~~~~g~p~Ise~~Vy~ 455 (469)
T 3eyp_A 437 LRIQDGKACPAIHTFGVYK 455 (469)
T ss_dssp EEEEEESSSCEEEEEEEEC
T ss_pred EEEEcCCCCeEEEEEEEEc
Confidence 9998777789999998643
No 21
>4gwi_A Lectinolysin, platelet aggregation factor SM-HPAF; cholesterol-dependent cytolysins, lewis antigens, F-type LEC glycan binding; HET: BDZ; 1.60A {Streptococcus mitis} PDB: 4gwj_A* 3lei_A* 3leg_A* 3le0_A* 3lek_A*
Probab=97.15 E-value=0.0013 Score=52.46 Aligned_cols=91 Identities=14% Similarity=0.179 Sum_probs=61.1
Q ss_pred cEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEE-EeCCccccccceeeecCCCcccccceEEEEeCCCceeeEE
Q psy16320 114 PVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYL-SLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLHHKQAKYL 192 (214)
Q Consensus 114 ~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~f-S~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~~r~ar~V 192 (214)
+--+.+||++...++.|.|.--.+-.. -.-.+..+|.+ |.||++|... ... .. .....++|.+....||||
T Consensus 54 ~~W~~VDLg~~~~v~~V~i~nr~d~~~-~~r~~~~~I~v~s~dg~~w~~~--~~~---~~--~~~~~~~i~~~~~~gRYV 125 (153)
T 4gwi_A 54 NAWWQVDLGKTENVGKVKLYNRGDGNV-ANRLSNFDVVLLNEAKQEVARQ--HFD---SL--NGKAELEVFFTAKDARYV 125 (153)
T ss_dssp TCEEEEEEEEEEEEEEEEEEECCSTTC-GGGSCSEEEEEECTTSCEEEEE--EES---CC--TTCSEEEEEEEEEEEEEE
T ss_pred CCEEEEECCCCEEEEEEEEEcccCCch-hhcccceEEEEECCCCCeeeee--EEe---cC--CCCCEEEEEeCCceEEEE
Confidence 356889999999999999952221110 11234556766 4689988753 221 11 112345666677899999
Q ss_pred EEEEEcCCeeEEEEEEEEEe
Q psy16320 193 KLQMYFSNKWLLISEIMFQS 212 (214)
Q Consensus 193 Ki~l~fa~~Wl~iSEI~F~S 212 (214)
||++.-...++=|.||.+-.
T Consensus 126 rv~~~~~~~~lsL~EveVyg 145 (153)
T 4gwi_A 126 KVELKTKNTPLSLAEVEVFR 145 (153)
T ss_dssp EEEECSSSBCCCEEEEEEEE
T ss_pred EEEEEcCCCceEEEEEEEEC
Confidence 99999877899999998754
No 22
>2w1s_A Hyaluronoglucosaminidase; hexosaminidase, family 32 carbohydrate binding module, toxin, secreted, virulence, hydrolase, glycosidase; HET: MSE BTB; 1.45A {Clostridium perfringens} PDB: 2w1q_A* 2w1u_A* 2wdb_A*
Probab=97.01 E-value=0.0061 Score=50.25 Aligned_cols=92 Identities=14% Similarity=0.133 Sum_probs=59.3
Q ss_pred EEEEEEcCceEEEeEE-EEEEecccCCceeeeeEEEEEEEeCCccccccceeeecCCCcccccceEEEEeCC-CceeeEE
Q psy16320 115 VEMVFEFDRVRNFTAM-HLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLH-HKQAKYL 192 (214)
Q Consensus 115 VeitFeF~~~rnfs~v-~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~-~r~ar~V 192 (214)
=-|.+||++++.++.| .+.-..... .-..+++..|.+|.||++|........ .... .....++..|. +..||||
T Consensus 66 qwLQVDLg~~~~VtgV~~tQG~~~~~-~~~~vt~Y~l~yS~DG~~W~~~~~~~~-~GN~--d~~t~v~~~f~~pi~ARYV 141 (192)
T 2w1s_A 66 EFIGLDLGKEIKLDGIRFVIGKNGGG-SSDKWNKFKLEYSLDNESWTTIKEYDK-TGAP--AGKDVIEESFETPISAKYI 141 (192)
T ss_dssp CEEEEEEEEEEEEEEEEEEECCSSTT-TTCCCSEEEEEEESSSSSCEEEEEEEC-TTCC--SSCEEEEEEEEEEEEEEEE
T ss_pred ceEEEECCCeEEEEEEEEEcCCCCCC-CCCeEEEEEEEEEcCCCCeEEEecCCc-cCCc--CCCcEEEEecCCCceEEEE
Confidence 4578899999999999 443222221 013456889999999999975432211 1111 11133455554 4789999
Q ss_pred EEEEEc-CCeeEEEEEEEE
Q psy16320 193 KLQMYF-SNKWLLISEIMF 210 (214)
Q Consensus 193 Ki~l~f-a~~Wl~iSEI~F 210 (214)
||...- ...|.=+.|+.+
T Consensus 142 Ri~p~~~~~~w~~~~elRV 160 (192)
T 2w1s_A 142 RLTNMENINKWLTFSEFAI 160 (192)
T ss_dssp EEEECSCBSCCEEEEEEEE
T ss_pred EEEEeeCCCccceEEEEEE
Confidence 999865 356988888888
No 23
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens}
Probab=96.92 E-value=0.0053 Score=60.23 Aligned_cols=90 Identities=18% Similarity=0.225 Sum_probs=65.4
Q ss_pred cEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccceeeecCCCcccccceEEEEeCCCceeeEEE
Q psy16320 114 PVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLHHKQAKYLK 193 (214)
Q Consensus 114 ~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~~r~ar~VK 193 (214)
+-.|++||++++.++.|.+.--+....+ .+++.+|+.|.||++|+...... .. .+...+.+.++ ...|||||
T Consensus 639 p~wl~VDLg~~~~V~~V~i~~r~~~~~g--~v~~y~I~~S~DG~~W~~v~~gt-~~---~~~~~~~v~f~--~v~ARYVR 710 (737)
T 2v5d_A 639 PHHLTLELDNVYEINKVKYAPRQDSKNG--RITGYKVSVSLDGENFTEVKTGT-LE---DNAAIKFIEFD--SVDAKYVR 710 (737)
T ss_dssp CCEEEEEEEEEEEEEEEEEECCSSCCTT--EEEEEEEEEESSSSCCCCSEEEE-CC---SSSSCEEEEEE--EEEEEEEE
T ss_pred CeEEEEECCCcEEEEEEEEEeccCCCCC--ceEEEEEEEEcCCCceEEEEeee-ec---CCCceEEEEeC--CceEEEEE
Confidence 4789999999999999998753322122 46788999999999997654321 11 12345666665 67899999
Q ss_pred EEEEcC--------CeeEEEEEEEEE
Q psy16320 194 LQMYFS--------NKWLLISEIMFQ 211 (214)
Q Consensus 194 i~l~fa--------~~Wl~iSEI~F~ 211 (214)
|++.-. +.|.=|.||.+-
T Consensus 711 i~~~~~~~~~~~G~~~~~siaE~~Vy 736 (737)
T 2v5d_A 711 LDVTDSVSDQANGRGKFATAAEVNVH 736 (737)
T ss_dssp EEEEEEECSSSSCTTTCCEESEEEEE
T ss_pred EEEEeeccccccCCCCcEEEEEEEEE
Confidence 999853 478999999873
No 24
>4a4a_A Alpha-N-acetylglucosaminidase family protein; hydrolase, 2 hydrolase, family 89 glycoside hydrolase, mucin carbohydrate-active enzyme; HET: NDG GAL; 1.90A {Clostridium perfringens} PDB: 2vcc_A 2vc9_A* 2vcb_A* 2vca_A
Probab=96.52 E-value=0.0092 Score=60.10 Aligned_cols=88 Identities=14% Similarity=0.152 Sum_probs=61.8
Q ss_pred EEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccceeeecCCCcccccceEEEEeCCCceeeEEEE
Q psy16320 115 VEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLHHKQAKYLKL 194 (214)
Q Consensus 115 VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~~r~ar~VKi 194 (214)
--|++||+++++|+.|.+.- ...+ ..+.+|++|.||++|+..........+. .....+++ .+..||||||
T Consensus 63 qWLqVDLG~~~~V~~V~l~~---~~~~---v~~Y~Ie~S~DG~~Wt~v~~~t~~~~~~--~~~d~v~f--~pv~ARYVRL 132 (914)
T 4a4a_A 63 KWIEVDLGGIYELSKIEIFN---KDEA---VYKYNIYASEDGENFNKIAYKNNDNVSD--SNGNMHTI--DNVRAGKIRI 132 (914)
T ss_dssp CEEEEEEEEEEEEEEEEEEC---SSSS---CEEEEEEEESSSSCCEEEEEECSCCCCC--TTCEEEEE--EEEEEEEEEE
T ss_pred ceEEEECCCeEEEEEEEEEe---cCCc---eEEEEEEEEcCCCCeEEEEEcccCccCC--CccceEEe--CCceEEEEEE
Confidence 56999999999999999952 2223 3578899999999997654433211111 12245555 5678999999
Q ss_pred EEEc-C-CeeEEEEEEEEEe
Q psy16320 195 QMYF-S-NKWLLISEIMFQS 212 (214)
Q Consensus 195 ~l~f-a-~~Wl~iSEI~F~S 212 (214)
++.- + ..|.=|+||.+-.
T Consensus 133 ~~t~~~~~~~~SI~EfeVyG 152 (914)
T 4a4a_A 133 DVVQNSNSDRVNIAEINVFG 152 (914)
T ss_dssp EEEEETTCSSCEESEEEEEE
T ss_pred EEEecCCCCceEEEEEEEEc
Confidence 9864 3 3789999998743
No 25
>3bn6_A Lactadherin; anticoagulation, anti-coagulation, anticoagulant, anti- coagulant, membrane binding, phosphatidyl-serine binding; 1.67A {Bos taurus} PDB: 2pqs_A
Probab=96.51 E-value=0.018 Score=45.40 Aligned_cols=79 Identities=13% Similarity=0.060 Sum_probs=49.8
Q ss_pred EEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccce-------eeecCCCcccccceEEEEeC-CC
Q psy16320 115 VEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPI-------QFTYMPDTIMEKARNVTIKL-HH 186 (214)
Q Consensus 115 VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~-------~~~~~~d~~~~~ar~vti~l-~~ 186 (214)
--|.+||++++.++.|.+.-...... -+..++.+|.+|.||++|..... .|.--.| . ...++..| .+
T Consensus 58 qwlqVDLg~~~~vt~v~tqg~~~~~~-~~~v~~y~i~~S~Dg~~W~~~~~~~~~~~~~F~GN~d--~--~~~~~~~l~~p 132 (158)
T 3bn6_A 58 EWLQIDLGSQKRVTGIITQGARDFGH-IQYVAAYRVAYGDDGVTWTEYKDPGASESKIFPGNMD--N--NSHKKNIFETP 132 (158)
T ss_dssp CCEEEEEEEEEEEEEEEEECEEETTE-EEEEEEEEEEEESSSSSCEECCCTTCSSCCCEECCSS--S--SCCEEEEEEEE
T ss_pred CEEEEeCCCceEEEEEEeeCCCCCCC-CceEEEEEEEEECCCCceEEEEcCCCCceeeeeccCC--C--CeEEEEeCCCC
Confidence 34788999999999998754332211 23557779999999999965322 1111111 1 12334444 35
Q ss_pred ceeeEEEEEEEc
Q psy16320 187 KQAKYLKLQMYF 198 (214)
Q Consensus 187 r~ar~VKi~l~f 198 (214)
..||||||...-
T Consensus 133 i~ARyVRi~p~~ 144 (158)
T 3bn6_A 133 FQARFVRIQPVA 144 (158)
T ss_dssp EEEEEEEEEEEE
T ss_pred EEEEEEEEEEEE
Confidence 679999998764
No 26
>3ues_A Alpha-1,3/4-fucosidase; TIM barrel, hydrolase-hydrolase inhibitor complex; HET: DFU; 1.60A {Bifidobacterium longum subsp} PDB: 3mo4_A* 3uet_A*
Probab=96.43 E-value=0.021 Score=53.65 Aligned_cols=86 Identities=12% Similarity=0.001 Sum_probs=64.4
Q ss_pred cEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccceeeecCCCcccccceEEEEeCCCceeeEEE
Q psy16320 114 PVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLHHKQAKYLK 193 (214)
Q Consensus 114 ~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~~r~ar~VK 193 (214)
.-.|+++|++++.|+.|.|.-.-..+..|+-| +|..|.||..|.....-. . ....|.++++ ...||+||
T Consensus 390 ~~~l~idLg~~~~~n~v~IqE~i~~gqRV~~y---~Ve~~~dgg~W~~va~gt-----t-iG~kri~~f~--~v~ar~VR 458 (478)
T 3ues_A 390 APAITLTLPQPTTINAIVIEEAIEHGQRIEHL---RVTGALPDGTERVLGQAG-----T-VGYRRILRFD--DVEVSSVT 458 (478)
T ss_dssp SCEEEEEEEEEEEEEEEEEEECGGGCCCEEEE---EEEEECTTSCEEEEEEES-----C-CTTCEEEEEE--EEEEEEEE
T ss_pred CeeEEEECCCCcEEEEEEEeecccCCCceEEE---EEEEEeCCCCEEEEEecc-----c-cCceEEEEeC--CeeeEEEE
Confidence 45799999999999999998544445555554 788999988997543221 1 1224666666 78999999
Q ss_pred EEEEcCCeeEEEEEEEE
Q psy16320 194 LQMYFSNKWLLISEIMF 210 (214)
Q Consensus 194 i~l~fa~~Wl~iSEI~F 210 (214)
|++.-+..+..|+||..
T Consensus 459 l~I~~s~~~p~Ise~~v 475 (478)
T 3ues_A 459 LHVDGSRLAPMISRAAA 475 (478)
T ss_dssp EEEEEESSSCCEEEEEE
T ss_pred EEEeccCCCeEEEEEEE
Confidence 99998888889999874
No 27
>2j1v_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; HET: NAG GAL FUC; 1.45A {Streptococcus pneumoniae} PDB: 2j1r_A* 2j1t_A* 2j1u_A* 2j1s_A*
Probab=96.24 E-value=0.018 Score=45.50 Aligned_cols=89 Identities=15% Similarity=0.222 Sum_probs=58.7
Q ss_pred cEEEEEEcCceEEEeEEEEEEeccc-CCceeeeeEEEEEEEeCCccccccceeeecCCCcccccceEEEEeCCCceeeEE
Q psy16320 114 PVEMVFEFDRVRNFTAMHLHINNYY-SKDIQVFSHANVYLSLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLHHKQAKYL 192 (214)
Q Consensus 114 ~VeitFeF~~~rnfs~v~ih~~n~~-~~~V~~f~~v~v~fS~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~~r~ar~V 192 (214)
+--+.+||+++..|++|.|.--.+- ... -...+|.+|.++. + ++....... . ....+++.+....||||
T Consensus 60 ~~W~~VDLg~~~~V~~V~i~~r~d~~~~r---~~~~~I~v~~~~~-~---~~~~~~~~~-~--~g~~~~~~~~~~~gRYV 129 (151)
T 2j1v_A 60 PSWWEVDLKKMDKVGLVKIYNRTDAETQR---LSNFDVILYDNNR-N---EVAKKHVNN-L--SGESVSLDFKEKGARYI 129 (151)
T ss_dssp TCEEEEEEEEEEEEEEEEEEECCSSCGGG---SCSEEEEEECTTC-C---EEEEEEECC-C--SSSEEEEEEEEEEEEEE
T ss_pred CCEEEEECCCCeEcCEEEEEcCCCccccc---cCCEEEEEECCCC-C---ceEeeEEcC-C--CCCEEEEecCCeeEEEE
Confidence 3568899999999999999743221 112 2345788888763 3 221101111 1 12356777777899999
Q ss_pred EEEEEcCCeeEEEEEEEEEe
Q psy16320 193 KLQMYFSNKWLLISEIMFQS 212 (214)
Q Consensus 193 Ki~l~fa~~Wl~iSEI~F~S 212 (214)
||++.-...++=|.||.+-.
T Consensus 130 rv~~~g~~~~lsL~EveVyg 149 (151)
T 2j1v_A 130 KVKLLTSGVPLSLAEVEVFR 149 (151)
T ss_dssp EEEESSTTCCCCEEEEEECC
T ss_pred EEEEECCCCceEEEEEEEEc
Confidence 99998767899999998743
No 28
>2wuh_A Discoidin domain receptor 2; receptor-peptide complex, transferase, nucleotide-binding, tyrosine-protein kinase; 1.60A {Homo sapiens} PDB: 2z4f_A
Probab=96.11 E-value=0.024 Score=46.05 Aligned_cols=78 Identities=8% Similarity=0.002 Sum_probs=47.6
Q ss_pred EEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccce-----eeecCCCcccccceEEEEeC-CCceee
Q psy16320 117 MVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPI-----QFTYMPDTIMEKARNVTIKL-HHKQAK 190 (214)
Q Consensus 117 itFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~-----~~~~~~d~~~~~ar~vti~l-~~r~ar 190 (214)
|.+||++++.++.|.+--.......-+.-++..+.+|.||++|..... .|.--.|. .. .++..| ..-.||
T Consensus 75 LQVDLg~~~~VtgV~tQG~~~~~~~~~~vt~Y~l~yS~Dg~~W~~y~~~~~~kvF~GN~D~--~t--~v~~~l~~pi~AR 150 (178)
T 2wuh_A 75 LQIDLHTLHFITLVGTQGRHAGGHGIEFAPMYKINYSRDGTRWISWRNRHGKQVLDGNSNP--YD--IFLKDLEPPIVAR 150 (178)
T ss_dssp EEEEEEEEEEEEEEEEECCCGGGTCCCCCSEEEEEEESSSSSCEECCCTTSCCCEECCSSS--SS--CEEEEEEEEEEEE
T ss_pred EEEecCCceEEeEEEEecccCCCCccceeEEEEEEEEcCCCcEEEEecCCccccccccCCC--Cc--eEEEeCCCCeEEE
Confidence 778999999999998765332211123455678999999999975422 12111111 11 223333 245799
Q ss_pred EEEEEEEc
Q psy16320 191 YLKLQMYF 198 (214)
Q Consensus 191 ~VKi~l~f 198 (214)
||||...-
T Consensus 151 yVRi~p~~ 158 (178)
T 2wuh_A 151 FVRFIPVT 158 (178)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEe
Confidence 99998753
No 29
>1czt_A Protein (coagulation factor V); membrane-binding, discoidin family, calcium- independent, blood clotting; 1.87A {Homo sapiens} SCOP: b.18.1.2 PDB: 1czs_A 1czv_A
Probab=96.06 E-value=0.051 Score=43.00 Aligned_cols=78 Identities=10% Similarity=0.064 Sum_probs=49.1
Q ss_pred EEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccce-------eeecCCCcccccceEEEEeC-CCc
Q psy16320 116 EMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPI-------QFTYMPDTIMEKARNVTIKL-HHK 187 (214)
Q Consensus 116 eitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~-------~~~~~~d~~~~~ar~vti~l-~~r 187 (214)
-|.+||++++.++.|.+.-..... .-+..++..|.+|.||++|..... .|.--.|. . ..++..| .+-
T Consensus 58 wLqVDLg~~~~Vt~v~tqG~~~~~-~~~~v~~y~l~yS~Dg~~W~~~~~~~~~~~~vF~GN~d~--~--t~v~~~l~~pi 132 (160)
T 1czt_A 58 WLEIDLLKIKKITAIITQGCKSLS-SEMYVKSYTIHYSEQGVEWKPYRLKSSMVDKIFEGNTNT--K--GHVKNFFNPPI 132 (160)
T ss_dssp CEEEEEEEEEEEEEEEEECEEETT-EEEEEEEEEEEEESSSSSCEECCCTTCSSCCCEECCSSS--S--CCEEEEEEEEE
T ss_pred EEEEeCCCcEEEEEEEEeCcCCCC-cccEEEEEEEEEECCCCcEEEEEcCCCcccccccCcCCC--C--ceEEEecCCCE
Confidence 478899999999999985433211 123456778999999999975422 22111111 1 1233344 346
Q ss_pred eeeEEEEEEEc
Q psy16320 188 QAKYLKLQMYF 198 (214)
Q Consensus 188 ~ar~VKi~l~f 198 (214)
.||||||...-
T Consensus 133 ~ARyvRi~p~~ 143 (160)
T 1czt_A 133 ISRFIRVIPKT 143 (160)
T ss_dssp EEEEEEEEEEE
T ss_pred EEEEEEEEEEE
Confidence 79999998754
No 30
>1k12_A Lectin; beta barrel, protein carbohydrate complex, sugar binding protein; HET: FUC; 1.90A {Anguilla anguilla} SCOP: b.18.1.15
Probab=95.86 E-value=0.018 Score=45.55 Aligned_cols=90 Identities=11% Similarity=0.045 Sum_probs=57.5
Q ss_pred EEEEEEcCceEEEeEEEEEEeccc-CCceeeeeEEEEEEEeCCcc--ccccceeeecCCCcccccceEEEEeC-CCceee
Q psy16320 115 VEMVFEFDRVRNFTAMHLHINNYY-SKDIQVFSHANVYLSLGGRQ--FSLEPIQFTYMPDTIMEKARNVTIKL-HHKQAK 190 (214)
Q Consensus 115 VeitFeF~~~rnfs~v~ih~~n~~-~~~V~~f~~v~v~fS~dG~~--f~~~~~~~~~~~d~~~~~ar~vti~l-~~r~ar 190 (214)
--+.+||+++..+++|.|.--.+- ... ....+|.+|.++.. |. .++.-... .. .....++|.+ ....||
T Consensus 59 ~W~~VDLg~~~~V~~V~i~~r~d~~~~r---~~~~~i~v~~s~~~~~~~-n~~~~~~~-~~--~~g~~~~i~~~~~~~gR 131 (158)
T 1k12_A 59 PWWRVDLLQVYTITSVTITNRGDCCGER---ISGAEINIGQHLASNGVN-NPECSVIG-SM--ATGETKTFHCPAPMIGR 131 (158)
T ss_dssp CEEEEEEEEEEEEEEEEEEECSSSCTTT---TTTCEEEEESSCTTTTTT-SCEEEECC-CC--CTTCEEEEEEEEEEEEE
T ss_pred CEEEEECCCceEEeEEEEEeCCCcCccc---cCCEEEEEEcCCcccccc-Cceeeeec-cc--CCCCEEEEECCCCCeeE
Confidence 457889999999999999743221 112 22336777775543 43 33321111 11 1124577777 678999
Q ss_pred EEEEEEEcCCeeEEEEEEEEEe
Q psy16320 191 YLKLQMYFSNKWLLISEIMFQS 212 (214)
Q Consensus 191 ~VKi~l~fa~~Wl~iSEI~F~S 212 (214)
||||++.-. .++=|.||.+-.
T Consensus 132 YVrv~~~g~-~~lsl~EveVyg 152 (158)
T 1k12_A 132 YVVTYLPTS-ESLHLCEVEVNV 152 (158)
T ss_dssp EEEEECCSS-SCCCEEEEEEEE
T ss_pred EEEEEECCC-CeEEEEEEEEec
Confidence 999999755 889999998743
No 31
>3hny_M Coagulation factor VIII; blood clotting, acute phase, blood coagulation, calcium, DIS mutation, disulfide bond, glycoprotein, hemophilia; 1.07A {Homo sapiens} SCOP: b.18.1.2 PDB: 3hnb_M 3hob_M 1d7p_M 1iqd_C 1cfg_A 1fac_A
Probab=95.66 E-value=0.081 Score=41.89 Aligned_cols=76 Identities=16% Similarity=0.122 Sum_probs=46.6
Q ss_pred EEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccce-----eeecCCCcccccceEEEEeCC-Cceee
Q psy16320 117 MVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPI-----QFTYMPDTIMEKARNVTIKLH-HKQAK 190 (214)
Q Consensus 117 itFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~-----~~~~~~d~~~~~ar~vti~l~-~r~ar 190 (214)
|.+||++++.++.|.+.=..... .-+.-++-.+.+|.||++|..... .|.--.|. .. .++..|. +-.||
T Consensus 61 LqVDLg~~~~VtgV~tqG~~~~~-~~~~v~~y~l~yS~Dg~~W~~~~~~~~~~vF~GN~d~--~t--~v~~~l~~pi~AR 135 (159)
T 3hny_M 61 LQVDFQKTMKVTGVTTQGVKSLL-TSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQGNQDS--FT--PVVNSLDPPLLTR 135 (159)
T ss_dssp EEEEEEEEEEEEEEEEECEEETT-EEEEEEEEEEEEESSSSSCEECEETTEECCEECCSSS--SS--CEEEEEEEEEEEE
T ss_pred EEcccCCcEEEEEEEeecCCCCC-ccceEEEEEEEEEECCCcEEEEecCCceEeeeccCCC--Cc--EEEEECCCCcEEE
Confidence 56899999999999876432211 123345668999999999975421 22111111 22 2233332 46799
Q ss_pred EEEEEEE
Q psy16320 191 YLKLQMY 197 (214)
Q Consensus 191 ~VKi~l~ 197 (214)
||||.-.
T Consensus 136 yvRi~P~ 142 (159)
T 3hny_M 136 YLRIHPQ 142 (159)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999765
No 32
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A*
Probab=95.58 E-value=0.0076 Score=59.16 Aligned_cols=83 Identities=6% Similarity=0.180 Sum_probs=34.2
Q ss_pred EEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccceeeecCCCcccccceEEEEeCCCceeeEEEE
Q psy16320 115 VEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLHHKQAKYLKL 194 (214)
Q Consensus 115 VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~~r~ar~VKi 194 (214)
=.+++||++++++++|++..-+.-..+ + .+|..|.||++|+... ++ .. ...+++.+.+..|||||+
T Consensus 629 ~wi~VdL~~~~~V~~I~i~~~~~~~~~---~--~~ve~S~DGk~W~~v~--~~--~~-----~~~~~~~~~pv~ARyVRl 694 (716)
T 2cho_A 629 NSVEIELDAIYPGENIQINFGKDAPCT---W--GRLEISTDAKEWKTVD--LK--QK-----ESRLSAGLQKAPVKFVRF 694 (716)
T ss_dssp --CEEEEEEEEEEEEEEECC--------------------------------------------CCEEECTTCEEEEEEC
T ss_pred CEEEEEcCCcEEEEEEEEecCCCCCCc---e--EEEEEECCCCCccCCC--cC--Cc-----ceEEEeccCCceeEEEEE
Confidence 457899999999999999876543323 2 7899999999997652 21 11 123455555788999999
Q ss_pred EEEcC---CeeEEEEEEEEEec
Q psy16320 195 QMYFS---NKWLLISEIMFQSV 213 (214)
Q Consensus 195 ~l~fa---~~Wl~iSEI~F~S~ 213 (214)
+..-. +.| +-||.+.+.
T Consensus 695 ~~~~~~~~~~w--i~Ef~V~~~ 714 (716)
T 2cho_A 695 TNVSDEEQQVY--LRQFVLTIE 714 (716)
T ss_dssp ---------------CEEEEES
T ss_pred EecccCCCCee--EEEEEEecc
Confidence 98864 568 999988753
No 33
>2vm9_A Discoidin-2, discoidin II; DDR, lectin, aggregation, cell adhesion; 1.75A {Dictyostelium discoideum} PDB: 2vmc_A* 2vmd_A* 2vme_A*
Probab=95.39 E-value=0.08 Score=45.36 Aligned_cols=75 Identities=15% Similarity=0.113 Sum_probs=48.8
Q ss_pred EEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccce--eeecCCCcccccceEEEEeC-CCceeeEEE
Q psy16320 117 MVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPI--QFTYMPDTIMEKARNVTIKL-HHKQAKYLK 193 (214)
Q Consensus 117 itFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~--~~~~~~d~~~~~ar~vti~l-~~r~ar~VK 193 (214)
|.+||++++.++.|.+.-......|| ++-.+.+|.||++|..... .|.--.|. ... +...| .+-.|||||
T Consensus 63 LqVDLg~~~~Vt~V~tQG~~~~~~~v---t~Y~l~yS~Dg~~W~~y~~~~vF~GN~d~--~t~--v~~~l~~pi~ARyVR 135 (257)
T 2vm9_A 63 IVAGSDSVKHFVAISTQGRGDHDQWV---TSYKLRYTLDNVNWVEYNNGEIINANKDR--NSI--VTINFNPPIKARSIA 135 (257)
T ss_dssp EEEEEEEEEEEEEEEEECCSSSSCEE---EEEEEEEESSSSCEEEGGGGCCEECCSSS--SCC--EEEEEEEEEEEEEEE
T ss_pred EeecCCCcEEEEEEEEeCCccCCceE---EEEEEEEEcCCCcEEEEcCCceecccCCC--Cce--EEEeCCCCceEEEEE
Confidence 67799999999999987655444454 4568999999999965432 23211122 122 23333 245799999
Q ss_pred EEEEc
Q psy16320 194 LQMYF 198 (214)
Q Consensus 194 i~l~f 198 (214)
|...-
T Consensus 136 i~p~~ 140 (257)
T 2vm9_A 136 IHPQT 140 (257)
T ss_dssp EEEEE
T ss_pred eeeee
Confidence 88654
No 34
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis}
Probab=95.30 E-value=0.018 Score=49.61 Aligned_cols=89 Identities=6% Similarity=0.098 Sum_probs=60.5
Q ss_pred cEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeC-----CccccccceeeecCCCcccccceEEEEeCCCce
Q psy16320 114 PVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLG-----GRQFSLEPIQFTYMPDTIMEKARNVTIKLHHKQ 188 (214)
Q Consensus 114 ~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~d-----G~~f~~~~~~~~~~~d~~~~~ar~vti~l~~r~ 188 (214)
+--+++||+++..|++|.|.-- + .+-.-.+..+|++|.+ +.+|... .... .. ..+.+++++....
T Consensus 196 ~~W~~VDLg~~~~v~~V~i~~~-d--~~~~~~~~~~i~vs~s~~~~~~~n~~~~-~~~~-~~-----~~~~~~~~~~~~~ 265 (293)
T 3cqo_A 196 DPWWRMDLSQTHRVFSVKVTNR-D--SFEKRINGAEIRIGDSLDNNGNHNPRCA-VITS-IP-----AGASTEFQCNGMD 265 (293)
T ss_dssp SCEEEEEEEEEEEEEEEEEECC-S--SSGGGGTTEEEEEESCCGGGGTTSCEEE-EECC-CC-----TTCEEEEEEEEEE
T ss_pred CCEEEEECCCeEEEeEEEEEcc-C--ccccccCCeEEEEeccCccccccCceee-eecc-cC-----CCCEEEEEcCCee
Confidence 3568999999999999999854 2 1112235567888643 3344321 1111 11 1246788777789
Q ss_pred eeEEEEEEEcCCeeEEEEEEEEEe
Q psy16320 189 AKYLKLQMYFSNKWLLISEIMFQS 212 (214)
Q Consensus 189 ar~VKi~l~fa~~Wl~iSEI~F~S 212 (214)
||||||++.-...|+-|.||.+-.
T Consensus 266 ~RYVrv~~~~~~~~~sl~EveVyg 289 (293)
T 3cqo_A 266 GRYVNIVIPGREEYLTLCEVEVYG 289 (293)
T ss_dssp EEEEEEECTTSEECCCCSEEEEEE
T ss_pred EEEEEEEecCCCccEEEEEEEEec
Confidence 999999998877899999998754
No 35
>2j22_A Fucolectin-related protein; carbohydrate-binding protein, carbohydrate binding protein; 1.8A {Streptococcus pneumoniae}
Probab=95.24 E-value=0.067 Score=42.06 Aligned_cols=87 Identities=11% Similarity=0.129 Sum_probs=56.8
Q ss_pred EEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEE--EeCCccccccceeeecCCCcccccceEEEEeCCCceeeEE
Q psy16320 115 VEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYL--SLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLHHKQAKYL 192 (214)
Q Consensus 115 VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~f--S~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~~r~ar~V 192 (214)
-=+.+||++...+++|.|.--.+-- + .-....+|.+ |.|+..|.. .+... . ...++|.+....||||
T Consensus 58 ~Ww~VDLg~~~~V~~V~i~~r~d~~-~-~r~~~~~I~vg~s~d~~~~~~---~~~~~----~--~~~~~~~~~~~~gRYV 126 (148)
T 2j22_A 58 SWWEIDLAQTEELEKLIIYNRTDAE-I-QRLSNFDIIIYDSNDYEVFTQ---HIDSL----E--SNNLSIDLKGLKGKKV 126 (148)
T ss_dssp CEEEEEEEEEEEEEEEEEEECCSSC-G-GGSEEEEEEEECTTSCEEEEE---EEEEC----S--SSEEEEEEEEEEEEEE
T ss_pred CEEEEECCCCEEeeEEEEEecCCCc-c-cccCCEEEEEEeCCCCCcccc---eecCC----C--CCEEEEEeCCeeEEEE
Confidence 4578999999999999997432211 1 1123345666 556544431 11111 1 1356777777899999
Q ss_pred EEEEEcCCeeEEEEEEEEEe
Q psy16320 193 KLQMYFSNKWLLISEIMFQS 212 (214)
Q Consensus 193 Ki~l~fa~~Wl~iSEI~F~S 212 (214)
||++.-...++=|.||.+-.
T Consensus 127 rv~~~g~~~~lsL~EveVyg 146 (148)
T 2j22_A 127 RISLRSAGIPLSLAEVEVYT 146 (148)
T ss_dssp EEEESSTTCCCCEEEEEEEE
T ss_pred EEEEECCCCceEEEEEEEEe
Confidence 99998767789999998753
No 36
>4deq_A Neuropilin-1, vascular endothelial growth factor; coagulation factor domain, heparin binding domain, angiogene protein binding-cytokine complex; 2.65A {Homo sapiens} PDB: 1kmx_A 1vgh_A 2vgh_A
Probab=95.13 E-value=0.17 Score=42.59 Aligned_cols=77 Identities=12% Similarity=0.072 Sum_probs=47.3
Q ss_pred EEEEcCceEEEeEEEEEEecccC-CceeeeeEEEEEEEeCCccccccce-----eeecCCCcccccceEEEEeCC-Ccee
Q psy16320 117 MVFEFDRVRNFTAMHLHINNYYS-KDIQVFSHANVYLSLGGRQFSLEPI-----QFTYMPDTIMEKARNVTIKLH-HKQA 189 (214)
Q Consensus 117 itFeF~~~rnfs~v~ih~~n~~~-~~V~~f~~v~v~fS~dG~~f~~~~~-----~~~~~~d~~~~~ar~vti~l~-~r~a 189 (214)
|.+||++++.|+.|.+.=..... ..-+.-++..|.+|.||++|..... +|. ........ +...|. .-.|
T Consensus 57 LQVDLg~~~~VtgV~tQG~~~~~~~~~~~VtsY~l~yS~DG~~W~~y~~~~~~kvF~--GN~D~~t~--v~~~l~~Pi~A 132 (218)
T 4deq_A 57 IQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQ--GNTNPTDV--VVAVFPKPLIT 132 (218)
T ss_dssp EEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESSSSSCEECEETTEECCEE--CCSSSSSC--EEEEEEEEEEE
T ss_pred EEEeCCCcEEEEEEEEEeccCCCCCccceEEEEEEEEEeCCCceEEeecceeeeccc--CcCCCCce--EEEeCCCCEEE
Confidence 56899999999999875432211 1134456678999999999965321 221 11111222 333332 5679
Q ss_pred eEEEEEEE
Q psy16320 190 KYLKLQMY 197 (214)
Q Consensus 190 r~VKi~l~ 197 (214)
|||||...
T Consensus 133 RyVRi~P~ 140 (218)
T 4deq_A 133 RFVRIKPA 140 (218)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEee
Confidence 99999875
No 37
>3cqo_A FBP32; F-lectin, fucolectin, sugar binding protein; HET: FUC; 2.32A {Morone saxatilis}
Probab=95.12 E-value=0.04 Score=47.38 Aligned_cols=93 Identities=12% Similarity=0.076 Sum_probs=58.3
Q ss_pred EEEEEEcCceEEEeEEEEEEeccc-CCceeeeeEEEEEEEeCCccccccceeeecCCCcccccceEEEEeC-CCceeeEE
Q psy16320 115 VEMVFEFDRVRNFTAMHLHINNYY-SKDIQVFSHANVYLSLGGRQFSLEPIQFTYMPDTIMEKARNVTIKL-HHKQAKYL 192 (214)
Q Consensus 115 VeitFeF~~~rnfs~v~ih~~n~~-~~~V~~f~~v~v~fS~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l-~~r~ar~V 192 (214)
--+.+||+++..|++|.|.--.+- ...++ .-++.|.-|.|+..|. .++..... . ......+++.+ ....||||
T Consensus 51 ~W~~VDLg~~~~v~~V~i~~r~d~~~~~~~-~~~i~v~~s~d~~~~~-n~~~~~~~-~--~~~g~~~~~~~~~~~~gRYV 125 (293)
T 3cqo_A 51 PWWRVDLLEPYIVTSITITNRGDCCPERLN-GVEIHIGNSLQENGVA-NPRVGVIS-H--IPAGISHTISFTERVEGRYV 125 (293)
T ss_dssp CEEEEEEEEEEEEEEEEEECCSSSCGGGGT-TEEEEEESCCGGGGTT-SCEEEEES-C--CCTTCEEEEECSSCCEEEEE
T ss_pred CEEEEECCCceEEEEEEEEeCCCCcccccc-CeEEEEecCCccCCcc-Cceeccee-e--cCCCceEEEEeCCCceeeEE
Confidence 457899999999999999843221 11221 2244444455554342 22211111 0 11225678888 77899999
Q ss_pred EEEEEcCCeeEEEEEEEEEe
Q psy16320 193 KLQMYFSNKWLLISEIMFQS 212 (214)
Q Consensus 193 Ki~l~fa~~Wl~iSEI~F~S 212 (214)
||++.-...++=|.||.+-.
T Consensus 126 rv~~~~~~~~~sl~EveVyg 145 (293)
T 3cqo_A 126 TVLLPGTNKVLTLCEVEVHG 145 (293)
T ss_dssp EEECCSSSBCCCCSEEEEEE
T ss_pred EEEecCCCcceEEEEEEEEe
Confidence 99998777899999998753
No 38
>2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A
Probab=95.01 E-value=0.052 Score=47.44 Aligned_cols=79 Identities=4% Similarity=0.035 Sum_probs=49.4
Q ss_pred EEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccce-------eeecCCCcccccceEEEEeCCCc
Q psy16320 115 VEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPI-------QFTYMPDTIMEKARNVTIKLHHK 187 (214)
Q Consensus 115 VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~-------~~~~~~d~~~~~ar~vti~l~~r 187 (214)
=-|.+||++++.++.|.+.-..... .-...++..|.+|.||++|..... .| .......... ...|+.-
T Consensus 215 qwLqVDLg~~~~Vt~V~tqg~~~~~-~~~~v~~Y~l~~S~dg~~W~~~~~~~~~~~~~F--~GN~d~~t~~--~~~~~pi 289 (318)
T 2qqi_A 215 EWLQIDLGEEKIVRGIIIQGGKHRE-NKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSF--EGNNNYDTPE--LRTFPAL 289 (318)
T ss_dssp CCEEEEEEEEEEEEEEEEEECCCTT-CCCCCCCEEEEEESSSSSCEECBCTTSSSBCCB--CCCSSSSCCE--EEEEEEE
T ss_pred cEEEEeCCCceEEEEEEEcCccCCC-CCeEEEEEEEEEECCCCCEEEEEcCCCcccccc--ccccCCCceE--EeeCCCE
Confidence 3478899999999999876433211 122345678999999999965321 12 1111111222 3344568
Q ss_pred eeeEEEEEEEc
Q psy16320 188 QAKYLKLQMYF 198 (214)
Q Consensus 188 ~ar~VKi~l~f 198 (214)
.||||||...-
T Consensus 290 ~ARyVRi~p~~ 300 (318)
T 2qqi_A 290 STRFIRIYPER 300 (318)
T ss_dssp EEEEEEEEECC
T ss_pred EEEEEEEEEEe
Confidence 89999999863
No 39
>2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens}
Probab=94.84 E-value=0.16 Score=44.28 Aligned_cols=75 Identities=9% Similarity=0.065 Sum_probs=48.3
Q ss_pred EEEEEcCceEEEeEEEEEEecc--------cCCceeeeeEEEEEEEeCCccccccce-------eeecCCCcccccceEE
Q psy16320 116 EMVFEFDRVRNFTAMHLHINNY--------YSKDIQVFSHANVYLSLGGRQFSLEPI-------QFTYMPDTIMEKARNV 180 (214)
Q Consensus 116 eitFeF~~~rnfs~v~ih~~n~--------~~~~V~~f~~v~v~fS~dG~~f~~~~~-------~~~~~~d~~~~~ar~v 180 (214)
=|.+||++++.++.|.+.-... ...+| ++..+.+|.||.+|..... .|.--.|. ..+ +
T Consensus 217 wLqVDLg~~~~Vt~V~tqG~~~~~~~~~~~~~~~v---t~Y~l~yS~dg~~W~~~~~~~~~~~~vF~GN~d~--~t~--v 289 (325)
T 2qqj_A 217 WLQVDLGTPKTVKGVIIQGARGGDSITAVEARAFV---RKFKVSYSLNGKDWEYIQDPRTQQPKLFEGNMHY--DTP--D 289 (325)
T ss_dssp CEEEEEEEEEEEEEEEEECBCCC----CCCCCBCE---EEEEEEEESSSSSCEECEETTTTEECCEECCSSS--SSC--E
T ss_pred eeEeccCCceeEEEEEecCCCCCCCccccCcceeE---EEEEEEEEeCCCCeEEEecCCCCccceeecccCC--CCe--E
Confidence 3788999999999999876542 23344 4678999999999965321 22111121 111 2
Q ss_pred EEeCCCceeeEEEEEEE
Q psy16320 181 TIKLHHKQAKYLKLQMY 197 (214)
Q Consensus 181 ti~l~~r~ar~VKi~l~ 197 (214)
...|.+-.||||||...
T Consensus 290 ~~~l~pi~ARyVRi~p~ 306 (325)
T 2qqj_A 290 IRRFDPIPAQYVRVYPE 306 (325)
T ss_dssp EEEEEEEEEEEEEEEEE
T ss_pred EeecCCEEEEEEEEEee
Confidence 22334578999999876
No 40
>1jhj_A APC10; beta sandwich, jellyroll, cell cycle; 1.60A {Homo sapiens} SCOP: b.18.1.9
Probab=94.30 E-value=0.42 Score=39.01 Aligned_cols=98 Identities=13% Similarity=0.229 Sum_probs=68.2
Q ss_pred cCcceeeecccccCCCccccccCCCCCcceEEeecCCCCCCCcEEEEEEcCceEEEeEEEEEEec--ccCCceeeeeEEE
Q psy16320 72 SGGLGQLTDGQIGADNFKMDAKSRNKGYEWIGWRNESFPYGKPVEMVFEFDRVRNFTAMHLHINN--YYSKDIQVFSHAN 149 (214)
Q Consensus 72 ~gGlGqLtDGi~G~dnf~~~~~~~~~g~~WVGW~n~~~~~~~~VeitFeF~~~rnfs~v~ih~~n--~~~~~V~~f~~v~ 149 (214)
..|..+|+||-.-+ | |+.+. ..+=.|+++|.+...++.|.|++.. +-+ +.|++|+
T Consensus 38 g~gv~~L~D~~~~T--y---------------WqSdg---~qpH~I~i~f~k~v~i~~l~i~vd~~~DeS---YtPs~I~ 94 (171)
T 1jhj_A 38 GFGVDQLRDDNLET--Y---------------WQSDG---SQPHLVNIQFRRKTTVKTLCIYADYKSDES---YTPSKIS 94 (171)
T ss_dssp TBSTHHHHSSCTTC--C---------------EECCS---SSSEEEEEEEEEEEEECEEEEEEEHHHHGG---GSEEEEE
T ss_pred CCChHHcCCCCCCe--e---------------EccCC---CCCeEEEEEECCCceEEEEEEEECCCCCCC---CCcEEEE
Confidence 34788899975422 2 33332 1256799999999999999999975 333 6799999
Q ss_pred EEEEeCCccccccceeeecCCCcccccceEEEEeCC-----CceeeEEEEEEEc
Q psy16320 150 VYLSLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLH-----HKQAKYLKLQMYF 198 (214)
Q Consensus 150 v~fS~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~-----~r~ar~VKi~l~f 198 (214)
|+...+..++..... .+ .++..-||.|++. ...+.||+|.+.-
T Consensus 95 v~aG~~~~dL~ei~~-v~-----l~~p~Gwv~i~l~~~~~~~~~~~~IQI~I~~ 142 (171)
T 1jhj_A 95 VRVGNNFHNLQEIRQ-LE-----LVEPSGWIHVPLTDNHKKPTRTFMIQIAVLA 142 (171)
T ss_dssp EEEESSTTSCEEEEE-EE-----CSSCEEEEEEECBCTTSSBEEEEEEEEEEEE
T ss_pred EEEeCCcccceeEEE-EE-----ccCCCEEEEEEeccCCCCceeEEEEEEEEec
Confidence 999888777754322 11 1223689999994 4678899988753
No 41
>2qqi_A Neuropilin-1; VEGF receptor, semaphorin receptor, angiogenesis, developmen protein, differentiation, glycoprotein, heparan sulfate, ME neurogenesis; 1.80A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 PDB: 2orz_A 2orx_A 2qqn_A 3i97_A* 1kex_A
Probab=94.25 E-value=0.23 Score=43.23 Aligned_cols=79 Identities=10% Similarity=0.034 Sum_probs=48.4
Q ss_pred EEEEEcCceEEEeEEEEEEecccC-CceeeeeEEEEEEEeCCccccccce-----eeecCCCcccccceEEEEeC-CCce
Q psy16320 116 EMVFEFDRVRNFTAMHLHINNYYS-KDIQVFSHANVYLSLGGRQFSLEPI-----QFTYMPDTIMEKARNVTIKL-HHKQ 188 (214)
Q Consensus 116 eitFeF~~~rnfs~v~ih~~n~~~-~~V~~f~~v~v~fS~dG~~f~~~~~-----~~~~~~d~~~~~ar~vti~l-~~r~ 188 (214)
=|.+||++++.++.|.+.-..... ..-+.-++..|.+|.||.+|..... .|.-..|. .. .++..| ..-.
T Consensus 57 wlqVDLg~~~~v~~v~tqg~~~~~~~~~~~v~~y~i~~S~Dg~~W~~~~~~~~~~~f~GN~d~--~~--~v~~~l~~pi~ 132 (318)
T 2qqi_A 57 WIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQGNTNP--TD--VVVAVFPKPLI 132 (318)
T ss_dssp CEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESSSSSCEECEETTEECCEECCSSS--SS--CEEEEEEEEEE
T ss_pred eEEEccCCcEEEEeeeeeccccCCCCccEeEEEEEEEEecCCCeEEEEeCCCeeEEEECCcCC--Cc--eeEeccCCCee
Confidence 367899999999999886432210 1123455668999999999975422 12111111 11 233344 3567
Q ss_pred eeEEEEEEEc
Q psy16320 189 AKYLKLQMYF 198 (214)
Q Consensus 189 ar~VKi~l~f 198 (214)
||||||...-
T Consensus 133 aRyVRi~p~~ 142 (318)
T 2qqi_A 133 TRFVRIKPAT 142 (318)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEee
Confidence 9999998765
No 42
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=93.94 E-value=0.13 Score=46.94 Aligned_cols=79 Identities=4% Similarity=0.034 Sum_probs=48.8
Q ss_pred EEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccce-------eeecCCCcccccceEEEEeCCCc
Q psy16320 115 VEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPI-------QFTYMPDTIMEKARNVTIKLHHK 187 (214)
Q Consensus 115 VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~-------~~~~~~d~~~~~ar~vti~l~~r 187 (214)
=-|.+||+++++++.|.+.=.... ..-+.-++-+|.+|.||++|..... .|.--.| ...+. ...|+..
T Consensus 347 qwLqVDLg~~~~vt~v~tqg~~~~-~~~~~v~~Y~i~~S~dg~~W~~~~~~~~~~~~~F~GN~d--~~~~~--~~~~~pi 421 (450)
T 2qqm_A 347 EWLQIDLGEEKIVRGIIIQGGKHR-ENKVFMRKFKIGYSNNGSDWKMIMDDSKRKAKSFEGNNN--YDTPE--LRTFPAL 421 (450)
T ss_dssp CCEEEEEEEEEEEEEEEEECCSCT-TTCCCEEEEEEEEESSSSSCEECBCTTSSSBCCEECCSS--SSSCE--EEEEEEE
T ss_pred ceEEEeCCCcEEEEEEEecCccCC-CCcEEEEEEEEEEECCCCcEEEEEcCCCCcccEecCcCC--CCceE--EccCCCe
Confidence 347899999999999987432211 1122345668999999999965321 2211111 11222 2334567
Q ss_pred eeeEEEEEEEc
Q psy16320 188 QAKYLKLQMYF 198 (214)
Q Consensus 188 ~ar~VKi~l~f 198 (214)
.||||||...-
T Consensus 422 ~aRyVRi~p~~ 432 (450)
T 2qqm_A 422 STRFIRIYPER 432 (450)
T ss_dssp EEEEEEEEEEE
T ss_pred EEEEEEEEEee
Confidence 89999998763
No 43
>2qqj_A Neuropilin-2; VEGF receptor, semaphorin receptor, developmental protein, differentiation, glycoprotein, membrane, neurogenesis, transmembrane; 1.95A {Homo sapiens}
Probab=93.75 E-value=0.46 Score=41.40 Aligned_cols=78 Identities=12% Similarity=0.083 Sum_probs=47.7
Q ss_pred EEEEcCceEEEeEEEEEEecccC-CceeeeeEEEEEEEeCCccccccce-----eeecCCCcccccceEEEEeC-CCcee
Q psy16320 117 MVFEFDRVRNFTAMHLHINNYYS-KDIQVFSHANVYLSLGGRQFSLEPI-----QFTYMPDTIMEKARNVTIKL-HHKQA 189 (214)
Q Consensus 117 itFeF~~~rnfs~v~ih~~n~~~-~~V~~f~~v~v~fS~dG~~f~~~~~-----~~~~~~d~~~~~ar~vti~l-~~r~a 189 (214)
|.+||++++.++.|.+.-..... ..-+.-++..|.+|.||++|..... .|.--.|. .. .++..| ..-.|
T Consensus 59 lqvDLg~~~~vt~v~tqg~~~~~~~~~~~v~~y~l~~S~dg~~W~~~~~~~~~~~f~Gn~d~--~~--~v~~~l~~pi~a 134 (325)
T 2qqj_A 59 LQVDLRFLTMLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDA--TE--VVLNKLHAPLLT 134 (325)
T ss_dssp EEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESSSSSCEECEETTEECCEECCSSS--SC--CEEEEEEEEEEE
T ss_pred EEEeccceEEEEEEEeeCCcCCCCCcceeEEEEEEEEEcCCcEeEEeeCCCccEEEeccCCC--Ce--eEEEecCCceEE
Confidence 67899999999999986543211 1123455668999999999965321 12111111 11 133334 34679
Q ss_pred eEEEEEEEc
Q psy16320 190 KYLKLQMYF 198 (214)
Q Consensus 190 r~VKi~l~f 198 (214)
|||||...-
T Consensus 135 RyvRi~p~~ 143 (325)
T 2qqj_A 135 RFVRIRPQT 143 (325)
T ss_dssp EEEEEEEEE
T ss_pred EEEeecCcc
Confidence 999998754
No 44
>2wn3_A Discoidin-1 subunit A; type-H lectin, cell adhesion, discoidin domain, lectin; HET: NGA GAL 1PG; 1.59A {Dictyostelium discoideum} PDB: 2w94_A* 2wn2_A* 2w95_A*
Probab=92.58 E-value=0.72 Score=39.40 Aligned_cols=84 Identities=12% Similarity=0.076 Sum_probs=51.9
Q ss_pred ceEEeecCCCCCCCcEEEEEEcCc--eEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccc--eeeecCCCcccc
Q psy16320 100 EWIGWRNESFPYGKPVEMVFEFDR--VRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEP--IQFTYMPDTIME 175 (214)
Q Consensus 100 ~WVGW~n~~~~~~~~VeitFeF~~--~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~--~~~~~~~d~~~~ 175 (214)
.|..=.++. +..+ ||++ ++.++.|.+-=......||. +..+.+|.||.+|.... ..|.--.|..
T Consensus 50 aW~a~~~d~---~qwL----DLg~~~~~~VtgV~tQG~~~~~~~Vt---sY~l~yS~dg~~W~~y~~~~vF~GN~d~~-- 117 (254)
T 2wn3_A 50 AWCSSIVDT---NQYI----VAGCEVPRTFMCVALQGRGDADQWVT---SYKIRYSLDNVSWFEYRNGAAVTGVTDRN-- 117 (254)
T ss_dssp SEECSSCST---TCCE----EEEEEEEEEEEEEEEECCSSSSCEEE---EEEEEEESSSSSCEEGGGGCCEECCSSSS--
T ss_pred eeeCCCCCc---hheE----EcCCCeEEEEEEEEEeCCCCCCCceE---EEEEEEECCCCcEEEecCCcEEeccCCCC--
Confidence 454444433 3455 9999 99999999876554555654 56899999999996532 2332222222
Q ss_pred cceEEEEeC-CCceeeEEEEEEE
Q psy16320 176 KARNVTIKL-HHKQAKYLKLQMY 197 (214)
Q Consensus 176 ~ar~vti~l-~~r~ar~VKi~l~ 197 (214)
.+ +...| ++-.||||||.-.
T Consensus 118 t~--v~~~l~~pi~ARyvRi~P~ 138 (254)
T 2wn3_A 118 TV--VNHFFDTPIRARSIAIHPL 138 (254)
T ss_dssp CC--EEEEEEEEEEEEEEEEEEE
T ss_pred ee--EEEecCCCcEEEEEEEEEE
Confidence 22 23333 2457999998765
No 45
>4ag4_A Epithelial discoidin domain-containing receptor 1; immune system-transferase complex; HET: NAG; 2.80A {Homo sapiens}
Probab=92.15 E-value=0.53 Score=42.41 Aligned_cols=77 Identities=12% Similarity=-0.004 Sum_probs=45.9
Q ss_pred EEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccce-----eeecCCCcccccceEEEEeC-CCceee
Q psy16320 117 MVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPI-----QFTYMPDTIMEKARNVTIKL-HHKQAK 190 (214)
Q Consensus 117 itFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~-----~~~~~~d~~~~~ar~vti~l-~~r~ar 190 (214)
|.+||++++.++.|.+-=....+..-+.-++-.+.+|.||++|..... .|.--.| .. ..+...| ++-.||
T Consensus 62 LQVDLg~~~~VtgV~TQGr~~~g~~~~wVtsY~l~yS~DG~~W~~y~d~~~~kvF~GN~D--~~--t~v~n~l~~PI~AR 137 (351)
T 4ag4_A 62 LQVDLQRLHLVALVGTQGRHAGGLGKEFSRSYRLRYSRDGRRWMGWKDRWGQEVISGNED--PE--GVVLKDLGPPMVAR 137 (351)
T ss_dssp EEEEEEEEEEEEEEEEECBCGGGTCCBCCSEEEEEEESSSSCEEECCCTTSCCCEECCSS--SS--CCEEEEEEEEEEEE
T ss_pred EEecCCCeEEEEEEEEecccCCCCccceEEEEEEEEEeCCCcEEEEECCCccccccccCC--CC--ceEEEeCCCCcEEE
Confidence 567999999999999764332211123345568999999999965321 2211111 11 1233333 356799
Q ss_pred EEEEEEE
Q psy16320 191 YLKLQMY 197 (214)
Q Consensus 191 ~VKi~l~ 197 (214)
||||.-.
T Consensus 138 yVRi~P~ 144 (351)
T 4ag4_A 138 LVRFYPR 144 (351)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9998875
No 46
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=92.10 E-value=0.099 Score=51.57 Aligned_cols=78 Identities=14% Similarity=0.076 Sum_probs=48.5
Q ss_pred EEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccce-----eeecCCCcccccceEEEEeCC-Ccee
Q psy16320 116 EMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPI-----QFTYMPDTIMEKARNVTIKLH-HKQA 189 (214)
Q Consensus 116 eitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~-----~~~~~~d~~~~~ar~vti~l~-~r~a 189 (214)
-|.+||++++.++.|.+.-..... .-+.-++.++.+|.||.+|..... .|. ..... ...++..|. .-.|
T Consensus 667 wLQVDLg~~~~VtgV~tQG~~~~~-~~~~VtsY~l~yS~DG~~W~~y~~~g~~kvF~--GN~D~--~t~v~~~l~~pi~A 741 (770)
T 2r7e_B 667 WLQVDFQKTMKVTGVTTQGVKSLL-TSMYVKEFLISSSQDGHQWTLFFQNGKVKVFQ--GNQDS--FTPVVNSLDPPLLT 741 (770)
T ss_dssp CEEECCSSCCCBCCEEECCCCCTT-CCCCCCEEEECCBSSTTCBCCCBCSSSBCCEE--CCSCS--SSCEEECCSSCCCC
T ss_pred eEEEccccceEEEEEEEeCCcCcC-cccceEEEEEEEEcCCCcEEEEecCCceeecc--cCCCC--CceEEEEcCCCEEE
Confidence 478899999999999864322210 112345668999999999975421 121 11111 123555664 5789
Q ss_pred eEEEEEEEc
Q psy16320 190 KYLKLQMYF 198 (214)
Q Consensus 190 r~VKi~l~f 198 (214)
|||||.-.-
T Consensus 742 RyVRi~p~~ 750 (770)
T 2r7e_B 742 RYLRIHPQS 750 (770)
T ss_dssp SBEEEEECS
T ss_pred EEEEEEEEe
Confidence 999997654
No 47
>2qqm_A Neuropilin-1; VEGF receptor, semaphorin receptor, calcium-binding domain, angiogenesis, developmental protein, differentiation; HET: NAG FUC; 2.00A {Homo sapiens} SCOP: b.18.1.2 b.18.1.2 b.23.1.1
Probab=90.65 E-value=0.8 Score=41.57 Aligned_cols=79 Identities=11% Similarity=0.037 Sum_probs=47.1
Q ss_pred EEEEEcCceEEEeEEEEEEecccC-CceeeeeEEEEEEEeCCccccccce-----eeecCCCcccccceEEEEeC-CCce
Q psy16320 116 EMVFEFDRVRNFTAMHLHINNYYS-KDIQVFSHANVYLSLGGRQFSLEPI-----QFTYMPDTIMEKARNVTIKL-HHKQ 188 (214)
Q Consensus 116 eitFeF~~~rnfs~v~ih~~n~~~-~~V~~f~~v~v~fS~dG~~f~~~~~-----~~~~~~d~~~~~ar~vti~l-~~r~ 188 (214)
=|.+||++++.++.|.+.-..... ..-+.-++-+|.+|.||.+|..... .|. ...... ..++..| ..-.
T Consensus 189 wlqvDLg~~~~vt~v~tqg~~~~~~~~~~~v~~y~l~~S~dg~~W~~~~~~~~~~~F~--GN~d~~--~~v~~~l~~pi~ 264 (450)
T 2qqm_A 189 WIQVDLGLLRFVTAVGTQGAISKETKKKYYVKTYKIDVSSNGEDWITIKEGNKPVLFQ--GNTNPT--DVVVAVFPKPLI 264 (450)
T ss_dssp CEEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESSSSSEEECBSSSSBCCEE--CCSSSS--CCEEEEEEEEEE
T ss_pred eEEEcccceEEEEEEeccCCCCCCCCcceeEEEEEEEEeCCCCceeEEeCCCeeeEee--cccCCC--cEEEEecCCceE
Confidence 377899999999999875432211 0112345568999999999965421 111 111111 2234444 3457
Q ss_pred eeEEEEEEEc
Q psy16320 189 AKYLKLQMYF 198 (214)
Q Consensus 189 ar~VKi~l~f 198 (214)
|||||+...-
T Consensus 265 aRyvRi~p~~ 274 (450)
T 2qqm_A 265 TRFVRIKPAT 274 (450)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEee
Confidence 9999998654
No 48
>2yfu_A Carbohydrate binding family 6; sugar binding protein; 1.65A {Clostridium thermocellum} PDB: 2y8j_A* 2y9i_A* 2y9s_A 2yb7_A* 2y8m_A 2yfz_A* 2yg0_A*
Probab=90.59 E-value=0.48 Score=37.90 Aligned_cols=89 Identities=9% Similarity=-0.058 Sum_probs=58.3
Q ss_pred cEEEEEEcCceE--EEeEEEEEEecccCCceeeeeEEEEEEEe--CCccccccceeeecCCCcccccceEEEEeCC-Cce
Q psy16320 114 PVEMVFEFDRVR--NFTAMHLHINNYYSKDIQVFSHANVYLSL--GGRQFSLEPIQFTYMPDTIMEKARNVTIKLH-HKQ 188 (214)
Q Consensus 114 ~VeitFeF~~~r--nfs~v~ih~~n~~~~~V~~f~~v~v~fS~--dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~-~r~ 188 (214)
+-.|.|||++.+ +++.++..-.+...++ +....++.|+ |+++|.... ++. +..... .+-++.+. .+.
T Consensus 44 ~~~i~iDLG~~~~~~l~~f~Y~Pr~~~~~~---miGg~fegSnd~Df~~~~tL~---~I~-~~P~~~-~~~~v~~~~~k~ 115 (155)
T 2yfu_A 44 GCWLGLDFGEGVRNVITQIKFCPRSGYEQR---MIGGIFQGANKEDFSDAVTLF---TIT-SLPGSG-TLTSVDVDNPTG 115 (155)
T ss_dssp SCEEEEECCTTCCEEEEEEEEECCTTCGGG---GTTCEEEEESSTTCTTCEEEE---ECC-SCCCTT-SCEEEECCCCCE
T ss_pred CceEEEECCCCcceEEeeEEEecCcccccC---CcEEEEEEECCCCCCCeEEEE---Eec-CCCccc-ccEEEECCCCCc
Confidence 367999999988 8888887776665444 3367899999 457776432 222 111111 12334443 577
Q ss_pred eeEEEEEEEcCCeeEEEEEEEEE
Q psy16320 189 AKYLKLQMYFSNKWLLISEIMFQ 211 (214)
Q Consensus 189 ar~VKi~l~fa~~Wl~iSEI~F~ 211 (214)
.||||....- ..+.=|.||.|-
T Consensus 116 yRYiRy~~p~-~~~~niAEi~fy 137 (155)
T 2yfu_A 116 FRYVRYLSPD-GSNGNIAELQFF 137 (155)
T ss_dssp ESEEEEECCT-TSTTCBSEEEEE
T ss_pred EEEEEEEcCC-CCeEEEEEEEEE
Confidence 9999988776 467778888885
No 49
>2zxq_A Endo-alpha-N-acetylgalactosaminidase; broken TIM barrel, glycosidase, hydrolase; 2.00A {Bifidobacterium longum}
Probab=89.22 E-value=0.072 Score=55.53 Aligned_cols=90 Identities=11% Similarity=0.116 Sum_probs=0.0
Q ss_pred EEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEe-CCccccccce-eeecCCCcccccceEEEEeCCC-ceeeE
Q psy16320 115 VEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSL-GGRQFSLEPI-QFTYMPDTIMEKARNVTIKLHH-KQAKY 191 (214)
Q Consensus 115 VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~-dG~~f~~~~~-~~~~~~d~~~~~ar~vti~l~~-r~ar~ 191 (214)
-.|+|||++++.++.|.+.--+.....-..+++.+|++|. ||++|+.... .+. . .....++.|.. ..|||
T Consensus 1272 qWLqVDLGe~~tIsgf~YqpRqdg~~~NG~VksYkIeVS~dDG~nWttVa~GTFs--g-----n~t~kti~Fd~PVkARY 1344 (1376)
T 2zxq_A 1272 AWYQFNLNEPTTINGLRYLPRSGGMNANGKIKGYKITLTLADGTTKDVVTDAEFS--T-----TTMWQKASFDAVENVTA 1344 (1376)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eEEEEEcCCcEEEEEEEEecCccCCCCCCceEEEEEEEECCCCCeEEEEEeeEEc--C-----CCceEEEEeCCCceEEE
Confidence 6799999999999999864422200112357888999999 9999975432 221 1 11234555543 47999
Q ss_pred EEEEEEcC--------CeeEEEEEEEEE
Q psy16320 192 LKLQMYFS--------NKWLLISEIMFQ 211 (214)
Q Consensus 192 VKi~l~fa--------~~Wl~iSEI~F~ 211 (214)
|||.+.-. +.|+=+.||.|-
T Consensus 1345 VRf~ats~~gg~g~~~Nk~aSIAEf~Vy 1372 (1376)
T 2zxq_A 1345 VRLTVLSSAGQSDSQANKFASAAELRLT 1372 (1376)
T ss_dssp ----------------------------
T ss_pred EEEEEEEccCCCCccccceEEEEEEEEe
Confidence 99999753 238899999764
No 50
>1sdd_B Coagulation factor V; copper-binding protein, cofactor, blood clottin; HET: NAG NDG; 2.80A {Bos taurus} SCOP: b.6.1.3 b.6.1.3 b.18.1.2 b.18.1.2
Probab=88.49 E-value=2.7 Score=40.00 Aligned_cols=79 Identities=11% Similarity=0.076 Sum_probs=48.1
Q ss_pred EEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccce-------eeecCCCcccccceEEEEeCCCce
Q psy16320 116 EMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPI-------QFTYMPDTIMEKARNVTIKLHHKQ 188 (214)
Q Consensus 116 eitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~-------~~~~~~d~~~~~ar~vti~l~~r~ 188 (214)
-|.+||++++.|+.|.+.-..... .-+.-++..|.+|.||++|..... .|. ............++ ....
T Consensus 385 wlqVDLg~~~~vt~v~tqg~~~~~-~~~~v~~y~i~yS~Dg~~W~~~~~~~~~~~~~f~--gn~d~~~~v~~~l~-~pi~ 460 (647)
T 1sdd_B 385 WIQVDMQKEVLLTGIQTQGAKHYL-KPYYTTEFCVAYSLDRKNWRIFKGNSTRNVMYFG--GNSDASTIKENQID-PPVV 460 (647)
T ss_dssp CEEEEEEEEEEEEEEEEECEESSS-SEEEEEEEEEEEESSSSSCEECCSSCSSSSCCEE--CCSSSSSCEEEEEE-EEEE
T ss_pred eEEeccCCeEEEEEEEEcCCCCCC-CccEEEEEEEEEEcCCCceEEecccCCCcceEec--CCCCCCceeEEcCC-CCEE
Confidence 477899999999999886544321 123445668999999999965321 221 11111122222222 3467
Q ss_pred eeEEEEEEEc
Q psy16320 189 AKYLKLQMYF 198 (214)
Q Consensus 189 ar~VKi~l~f 198 (214)
||||||...-
T Consensus 461 aRyVRi~p~~ 470 (647)
T 1sdd_B 461 ARYIRISPTG 470 (647)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEEe
Confidence 9999998764
No 51
>1gqp_A DOC1/APC10; cell cycle, APC10/DOC1, APC/cyclosome, ubiquitination, E3 ubiquitin ligase, beta sandwich, jelly roll; 2.2A {Saccharomyces cerevisiae} SCOP: b.18.1.9
Probab=88.00 E-value=3.4 Score=35.05 Aligned_cols=114 Identities=12% Similarity=0.211 Sum_probs=70.6
Q ss_pred eEeecccCcccc--ccccCcceeeecccccCCCccccccCCCCCcceEEeecCCCCCCCcEEEEEEcCceEEEeEEEEEE
Q psy16320 57 LTDKTYDGVVED--GLLSGGLGQLTDGQIGADNFKMDAKSRNKGYEWIGWRNESFPYGKPVEMVFEFDRVRNFTAMHLHI 134 (214)
Q Consensus 57 l~D~tYDG~~~~--~~l~gGlGqLtDGi~G~dnf~~~~~~~~~g~~WVGW~n~~~~~~~~VeitFeF~~~rnfs~v~ih~ 134 (214)
+.|.+=...+.= .....|..+|+||-.-+ | |+ .+. ..+=-|++.|.+...+..|.+++
T Consensus 52 l~eI~~~A~WsvSS~K~g~gV~~L~D~s~~T--y------------WQ---SDG---~qPH~ItI~f~k~v~I~~L~iyv 111 (221)
T 1gqp_A 52 MINVTHLALWKPSSFKLGNPVDFALDDNYDT--F------------WQ---SDG---GQPHQLDIMFSKRMDICVMAIFF 111 (221)
T ss_dssp EEECGGGSEEEESCCCTTCCGGGGSSSCTTC--C------------EE---CCS---SSSEEEEEEEEEEEEECEEEEEE
T ss_pred ceeccCceEEEEecCCCcCCHHHhcCCCccc--e------------ec---cCC---CCCeEEEEEEcCCceEEEEEEEE
Confidence 455444444431 22356888899875422 2 33 333 23567999999999999999999
Q ss_pred ecccCCceeeeeEEEEEEEeCCccccccceeeecCCCcccccceEEEEeCCC-------ceeeEEEEEEE
Q psy16320 135 NNYYSKDIQVFSHANVYLSLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLHH-------KQAKYLKLQMY 197 (214)
Q Consensus 135 ~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~~-------r~ar~VKi~l~ 197 (214)
..... .-+.|++|.|..-.+..+...... .+ ..+..-||.|+|.. ..+.+|+|.+.
T Consensus 112 D~~~D-eSYtPs~I~V~aG~~~~dL~e~~~-v~-----l~~p~GWv~i~l~d~~~~~~~l~~~~IQI~I~ 174 (221)
T 1gqp_A 112 SMIAD-ESYAPSLVKVYAGHSPSDARFYKM-LE-----VRNVNGWVALRFLDNREDDQLLKCQFIRLLFP 174 (221)
T ss_dssp EHHHH-GGGSEEEEEEEEESSTTTCEEEEE-EE-----EEECEEEEEECCC--------EEEEEEEEEEE
T ss_pred CCCCC-CCCCCEEEEEEEeCCcCcceEEEE-EE-----ecCCCEEEEEEccCCCCCCCeeEEEEEEEEEe
Confidence 86432 236799999888776555543221 11 11234789998864 34567777764
No 52
>2qqo_A Neuropilin-2; VEGF receptor, semaphorin receptor, calcium-binding domain, developmental protein, differentiation, glycoprotein, membr neurogenesis; 2.30A {Homo sapiens}
Probab=85.68 E-value=5.3 Score=36.24 Aligned_cols=78 Identities=12% Similarity=0.074 Sum_probs=45.6
Q ss_pred EEEEcCceEEEeEEEEEEecccCC-ceeeeeEEEEEEEeCCccccccce-----eeecCCCcccccceEEEEeC-CCcee
Q psy16320 117 MVFEFDRVRNFTAMHLHINNYYSK-DIQVFSHANVYLSLGGRQFSLEPI-----QFTYMPDTIMEKARNVTIKL-HHKQA 189 (214)
Q Consensus 117 itFeF~~~rnfs~v~ih~~n~~~~-~V~~f~~v~v~fS~dG~~f~~~~~-----~~~~~~d~~~~~ar~vti~l-~~r~a 189 (214)
|.+||++++.++.|.+.-...... .-+.-+.-.|.+|.||++|..... .|.-..|. . ..++..| ....|
T Consensus 188 lqVDLg~~~~vt~v~tqG~~~~~~~~~~~v~~y~l~~S~dg~~W~~~~~~~~~~~F~Gn~d~--~--~~v~~~l~~pi~a 263 (460)
T 2qqo_A 188 LQVDLRFLTMLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDA--T--EVVLNKLHAPLLT 263 (460)
T ss_dssp EEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESSSSSCEECEETTEECCEECCSSS--S--SCEEEEEEEEEEE
T ss_pred EeccCCceEEEEEEEeecCCCCCCCccceEEEEEEEEEcCCCCeeEecCCCccEEEecccCC--C--ceEEEeCCCCeee
Confidence 778999999999988764332111 122345568999999999965321 12111111 1 1222233 24569
Q ss_pred eEEEEEEEc
Q psy16320 190 KYLKLQMYF 198 (214)
Q Consensus 190 r~VKi~l~f 198 (214)
|||||...-
T Consensus 264 RyvRi~p~~ 272 (460)
T 2qqo_A 264 RFVRIRPQT 272 (460)
T ss_dssp EEEEEEEEE
T ss_pred eEEEEEeee
Confidence 999987543
No 53
>2qqk_A Neuropilin-2; VEGF receptor, semaphorin receptor, phage-derived antibody, developmental protein, differentiation, glycoprotein; HET: NAG; 2.75A {Homo sapiens} PDB: 2qql_A
Probab=85.35 E-value=4.4 Score=37.85 Aligned_cols=77 Identities=12% Similarity=0.084 Sum_probs=45.7
Q ss_pred EEEEcCceEEEeEEEEEEecccCC-ceeeeeEEEEEEEeCCccccccce-----eeecCCCcccccceEEEEeC-CCcee
Q psy16320 117 MVFEFDRVRNFTAMHLHINNYYSK-DIQVFSHANVYLSLGGRQFSLEPI-----QFTYMPDTIMEKARNVTIKL-HHKQA 189 (214)
Q Consensus 117 itFeF~~~rnfs~v~ih~~n~~~~-~V~~f~~v~v~fS~dG~~f~~~~~-----~~~~~~d~~~~~ar~vti~l-~~r~a 189 (214)
|.+||++++.++.|.+.-...... .-+.-++-++.+|.||++|..... .|.--.|. . ..+...| ....|
T Consensus 307 lqVDLg~~~~vt~v~tqG~~~~~~~~~~~v~~y~l~~S~dg~~W~~~~~~~~~~~f~GN~d~--~--~~v~~~l~~pi~a 382 (579)
T 2qqk_A 307 LQVDLRFLTMLTAIATQGAISRETQNGYYVKSYKLEVSTNGEDWMVYRHGKNHKVFQANNDA--T--EVVLNKLHAPLLT 382 (579)
T ss_dssp EEEEEEEEEEEEEEEEECEECTTTCCEEEEEEEEEEEESSSSSCEECEETTEECCEECCSSS--S--CCEEEEEEEEEEE
T ss_pred EEeecceeEEEEEEEccCCccCCCCcccceEEEEEEEECCCCceeeeecCCcceEEcCCCCC--C--cEEEEeCCCCeee
Confidence 778999999999998775432111 123345568999999999964321 12111111 1 1223333 34579
Q ss_pred eEEEEEEE
Q psy16320 190 KYLKLQMY 197 (214)
Q Consensus 190 r~VKi~l~ 197 (214)
|||||.-.
T Consensus 383 RyvRi~p~ 390 (579)
T 2qqk_A 383 RFVRIRPQ 390 (579)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99998754
No 54
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=85.32 E-value=1.6 Score=40.50 Aligned_cols=43 Identities=12% Similarity=0.251 Sum_probs=36.1
Q ss_pred CcEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeC-Cccccc
Q psy16320 113 KPVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLG-GRQFSL 161 (214)
Q Consensus 113 ~~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~d-G~~f~~ 161 (214)
..|.||++|++.=.|+.|.|.+ +.++ |....|+=|.| |++|+.
T Consensus 102 ~~v~itl~l~~~~~~~~v~~~f-~s~r-----P~~~~ieks~d~g~tw~p 145 (525)
T 4aqs_A 102 ENVTIQLDLEAEFHFTHLIMTF-KTFR-----PAAMLIERSSDFGKAWGV 145 (525)
T ss_dssp CCCEEEEEEEEEEEEEEEEEEE-SSCC-----CSEEEEEEESSTTSSCEE
T ss_pred cCeEEEEcCCCeEEEEEEEEEE-ECCC-----CCeEEEEEecCCCCCCcc
Confidence 4799999999999999999977 4443 77788999999 999854
No 55
>4gz9_A Neuropilin-1, A5 protein; multi-domain, cell-CELL signaling, plexin, semaphorin, VEGF, glycosilated, transmembrane, signaling protein; HET: NAG BMA; 2.70A {Mus musculus} PDB: 4gza_H
Probab=83.46 E-value=5.9 Score=37.24 Aligned_cols=75 Identities=11% Similarity=0.053 Sum_probs=43.5
Q ss_pred EEEEcCceEEEeEEEEEEe--c--ccCCceeeeeEEEEEEEeCCccccccc-----eeeecCCCcccccceEEEEeCCCc
Q psy16320 117 MVFEFDRVRNFTAMHLHIN--N--YYSKDIQVFSHANVYLSLGGRQFSLEP-----IQFTYMPDTIMEKARNVTIKLHHK 187 (214)
Q Consensus 117 itFeF~~~rnfs~v~ih~~--n--~~~~~V~~f~~v~v~fS~dG~~f~~~~-----~~~~~~~d~~~~~ar~vti~l~~r 187 (214)
|.+||.+++.++.|.+-=. . ....||. +-.|.+|.||..|.... ..|.--.|........+.- +-
T Consensus 308 lqVDl~~~~~it~v~tQG~~~~~~~~~~~v~---~y~v~~s~dg~~w~~y~~~~~~~vf~GN~d~~~~v~~~l~~---pi 381 (577)
T 4gz9_A 308 IQVDLGLLRFVTAVGTQGAISKETKKKYYVK---TYRVDISSNGEDWISLKEGNKAIIFQGNTNPTDVVLGVFSK---PL 381 (577)
T ss_dssp EEEEEEEEEEEEEEEEECEECTTTCCEEEEE---EEEEEEESSSSSCEECBSSSSBCCEECCSSSSSCEEEEEEE---EE
T ss_pred EEEcCCCEEEEEEEEccCCCCCCCCcceeEE---EEEEEEEcCCCcEEEEecCCCceEEeCCCCCCcEeEeecCC---Cc
Confidence 5679999999999987421 1 1223554 44799999999996431 1221111211111122222 35
Q ss_pred eeeEEEEEEE
Q psy16320 188 QAKYLKLQMY 197 (214)
Q Consensus 188 ~ar~VKi~l~ 197 (214)
+||||||.-.
T Consensus 382 ~aryvRi~p~ 391 (577)
T 4gz9_A 382 ITRFVRIKPV 391 (577)
T ss_dssp EEEEEEEEEE
T ss_pred EEEEEEEEeE
Confidence 6999998754
No 56
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=78.72 E-value=4 Score=37.39 Aligned_cols=43 Identities=12% Similarity=0.104 Sum_probs=35.9
Q ss_pred cEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeC-Cccccc
Q psy16320 114 PVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLG-GRQFSL 161 (214)
Q Consensus 114 ~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~d-G~~f~~ 161 (214)
.|.||++|++.=.|+.|.|.+-|.++ |....|+=|.| |++|+.
T Consensus 107 ~V~itLdL~~~f~~t~v~l~F~~spR-----P~~m~ierS~D~G~tW~p 150 (403)
T 2y38_A 107 EVNVTLDLGQVFHVAYVLIKFANSPR-----PDLWVLERSTDFGHTYQP 150 (403)
T ss_dssp CCEEEEEEEEEEEEEEEEEEECSSCC-----CSEEEEEEESSSSSSEEE
T ss_pred cceeEEeCCCcEEEEEEEEEecCCCC-----CCeEEEEeccCCCCCccc
Confidence 69999999999999999999976555 66667888999 887754
No 57
>3gza_A Putative alpha-L-fucosidase; NP_812709.1, structural genomic center for structural genomics, JCSG; HET: MSE EPE; 1.60A {Bacteroides thetaiotaomicron vpi-5482}
Probab=73.43 E-value=22 Score=32.81 Aligned_cols=84 Identities=11% Similarity=0.064 Sum_probs=59.5
Q ss_pred EEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccceeeecCCCcccccceEEEEeCCCceeeEEEE
Q psy16320 115 VEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPIQFTYMPDTIMEKARNVTIKLHHKQAKYLKL 194 (214)
Q Consensus 115 VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~~~~~~~d~~~~~ar~vti~l~~r~ar~VKi 194 (214)
-.++|+|.+++.|+.|.|.=.-..++.|.-|+ |+++ .+| .|.....-.+ .. .-|-++++ .-.|+-|||
T Consensus 356 ~~~~i~l~~~~~fn~v~l~E~I~~GQRV~~f~-ve~~--~~g-~W~~v~~GtT-IG-----~kRi~rf~--~V~a~~lRl 423 (443)
T 3gza_A 356 KSLTLKLGKEQSVNYCIIQENIKNGERIRQYQ-IEAK--VNG-KWQTVCKGES-VG-----HKRIEKFE--PVEATALRL 423 (443)
T ss_dssp SEEEEEEEEEEEEEEEEEEECGGGCCCEEEEE-EEEE--ETT-EEEEEEEESC-CT-----TCEEEEEE--EEEEEEEEE
T ss_pred ceEEEEcCCCceEeEEEEEecCCCCCcccEEE-EEEE--eCC-eEEEEEeeee-ec-----ceEEEecC--CeeeeEEEE
Confidence 56889999999999999998888888888874 4444 466 6865533221 11 12655554 678899999
Q ss_pred EEEcCCeeEEEEEEEE
Q psy16320 195 QMYFSNKWLLISEIMF 210 (214)
Q Consensus 195 ~l~fa~~Wl~iSEI~F 210 (214)
++.-+.+=..|+||..
T Consensus 424 ~I~~sr~~p~I~~~gv 439 (443)
T 3gza_A 424 TVSESIALPDIINFSA 439 (443)
T ss_dssp EEEEESSCCCEEEEEE
T ss_pred EEEecCCCcEEEEEEE
Confidence 9987655567888864
No 58
>2r7e_B Coagulation factor VIII; ceruloplasmin fold, cupper protein fold, C2 domain fold, ACU blood coagulation, disease mutation, glycoprotein; HET: NAG BMA MAN; 3.70A {Homo sapiens} PDB: 3cdz_B*
Probab=68.92 E-value=5 Score=39.48 Aligned_cols=82 Identities=10% Similarity=-0.008 Sum_probs=48.3
Q ss_pred EEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccce-------eeecCCCcccccceEEEEeCC-Cc
Q psy16320 116 EMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPI-------QFTYMPDTIMEKARNVTIKLH-HK 187 (214)
Q Consensus 116 eitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~-------~~~~~~d~~~~~ar~vti~l~-~r 187 (214)
-|.+||.+++.++.|.+--.... ..-+.-++..|.+|.||.+|..... .| ....... ..+...|. ..
T Consensus 508 wLQVDLg~~~~Vt~V~tQG~~~~-~~~~~v~sY~I~yS~DG~~W~~y~~~~~g~~~vF--~GN~D~~--tvv~~~l~~pi 582 (770)
T 2r7e_B 508 WIKVDLLAPMIIHGIKTQGARQK-FSSLYISQFIIMYSLDGKKWQTYRGNSTGTLMVF--FGNVDSS--GIKHNIFNPPI 582 (770)
T ss_dssp CEEEEEEEEEEECBCCCCCEECS-SSEECCSEEEEEEESSSSSCBCCCCSSSSSSCCC--CCCSSTT--CCCCCCCSSCE
T ss_pred eEEecCCceEEEEEEEEcccCcC-CcccceEEEEEEEecCCCccEEeecccccceeee--cCCCCCC--ceeEEeccCce
Confidence 46789999999999887432211 0112335668999999999964321 11 0111001 12334453 56
Q ss_pred eeeEEEEEEEcCCee
Q psy16320 188 QAKYLKLQMYFSNKW 202 (214)
Q Consensus 188 ~ar~VKi~l~fa~~W 202 (214)
.||||||...-...|
T Consensus 583 ~ARyVRi~p~~~~~~ 597 (770)
T 2r7e_B 583 IARYIRLHPTHYSIR 597 (770)
T ss_dssp EEEEEEEEEEECSSS
T ss_pred eEeEEEEeccccccc
Confidence 899999988654333
No 59
>4deq_A Neuropilin-1, vascular endothelial growth factor; coagulation factor domain, heparin binding domain, angiogene protein binding-cytokine complex; 2.65A {Homo sapiens} PDB: 1kmx_A 1vgh_A 2vgh_A
Probab=68.92 E-value=1 Score=37.74 Aligned_cols=17 Identities=0% Similarity=-0.101 Sum_probs=15.2
Q ss_pred ceeeEEee-CCCccCCce
Q psy16320 16 GKVHFLLG-ADEEQNQGL 32 (214)
Q Consensus 16 ~~~~~~l~-~GC~w~dgl 32 (214)
+..|||+| |||.+.|++
T Consensus 144 ~~i~lRvElyGC~~~~~v 161 (218)
T 4deq_A 144 TGISMRFEVYGCKITDYV 161 (218)
T ss_dssp SSCCBEEEEEEECTTTCC
T ss_pred CCcEEEEEEEeecccccc
Confidence 46899999 999999988
No 60
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels, cell WALL, peptidoglycan-anchor, secreted, hydrolase; HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A
Probab=67.66 E-value=1.1 Score=45.26 Aligned_cols=100 Identities=14% Similarity=0.204 Sum_probs=0.0
Q ss_pred cceeeecccccCCCccccccCCCCCcceEEeecCCCCCCCcEEEEEEcCceEEEeEEEEEEecccCCc----eeeeeEEE
Q psy16320 74 GLGQLTDGQIGADNFKMDAKSRNKGYEWIGWRNESFPYGKPVEMVFEFDRVRNFTAMHLHINNYYSKD----IQVFSHAN 149 (214)
Q Consensus 74 GlGqLtDGi~G~dnf~~~~~~~~~g~~WVGW~n~~~~~~~~VeitFeF~~~rnfs~v~ih~~n~~~~~----V~~f~~v~ 149 (214)
+...++||.+=.. + ..|+.=. . +=-|.|||++++.|++..|--...-+.. -..-+.-.
T Consensus 821 ~p~kaVDG~~~~~---s--------tKWcs~~---~----~~wl~vDLg~~~tI~~~vv~hagaggE~~~~~~~NT~dF~ 882 (937)
T 3gdb_A 821 GIEGMLNGTITSL---S--------DKWSSAQ---L----SGSVDIRLTKSRTVVRWVMDHAGAGGESVNDGLMNTKDFD 882 (937)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CHHHhcCCcccCC---C--------CccccCC---C----CceEEEECCCcEEEeEEEEEecccCccccccccccccceE
Confidence 4456888866321 1 2566432 1 2468899999999999988765322211 12344557
Q ss_pred EEEEeCCccccccceeeecCCCcccccceEEE-EeC-CCceeeEEEEEEEcC
Q psy16320 150 VYLSLGGRQFSLEPIQFTYMPDTIMEKARNVT-IKL-HHKQAKYLKLQMYFS 199 (214)
Q Consensus 150 v~fS~dG~~f~~~~~~~~~~~d~~~~~ar~vt-i~l-~~r~ar~VKi~l~fa 199 (214)
++.|.|+.+|.... .+..+...|+ +.| ....||||||.+..+
T Consensus 883 Lq~s~d~~~W~~vd--------~VtgN~~~vTd~~l~~pv~ARYvRL~Vt~~ 926 (937)
T 3gdb_A 883 LYYKDADGEWKLAK--------EVRGNKAHVTDITLDKPITAQDWRLNVVTS 926 (937)
T ss_dssp ----------------------------------------------------
T ss_pred EEEecCCCCeEEee--------EeeCCcceeEEeecCCceeEEEEEEEEecC
Confidence 88998888997432 2222222222 344 256899999998874
No 61
>2wn3_A Discoidin-1 subunit A; type-H lectin, cell adhesion, discoidin domain, lectin; HET: NGA GAL 1PG; 1.59A {Dictyostelium discoideum} PDB: 2w94_A* 2wn2_A* 2w95_A*
Probab=67.05 E-value=2.4 Score=36.10 Aligned_cols=14 Identities=0% Similarity=-0.012 Sum_probs=12.3
Q ss_pred eeeEEee-CCCccCC
Q psy16320 17 KVHFLLG-ADEEQNQ 30 (214)
Q Consensus 17 ~~~~~l~-~GC~w~d 30 (214)
..|||+| |||.+.+
T Consensus 143 ~i~lR~El~Gc~~~~ 157 (254)
T 2wn3_A 143 HISLRCEFYTQPVQS 157 (254)
T ss_dssp SCEEEEEEEECCCCC
T ss_pred ccEEEEEeccCCccc
Confidence 5899999 9999876
No 62
>3m1h_A Lysine specific cysteine protease; beta jelly roll barrel, cleaved adhesin family, Lys-gingipai hemagglutination domain; 1.56A {Porphyromonas gingivalis}
Probab=63.35 E-value=59 Score=26.35 Aligned_cols=80 Identities=15% Similarity=0.282 Sum_probs=47.4
Q ss_pred EEEEEecccCCceeeeeEEEEEEEeCCc---cccccceeeecCCC------------cccccceEEEEeCCCceeeEEEE
Q psy16320 130 MHLHINNYYSKDIQVFSHANVYLSLGGR---QFSLEPIQFTYMPD------------TIMEKARNVTIKLHHKQAKYLKL 194 (214)
Q Consensus 130 v~ih~~n~~~~~V~~f~~v~v~fS~dG~---~f~~~~~~~~~~~d------------~~~~~ar~vti~l~~r~ar~VKi 194 (214)
|+....+. ... ..|.+.+|++|..|+ .|...-..-....+ .....-...+++|.. -.+||=+
T Consensus 81 l~F~~~~~-~~~-~~~E~~~V~~Sttg~~~adFt~~l~~et~tg~~~~~~~~~~~~~~~~~~W~~~~vdL~~-gt~Y~Af 157 (178)
T 3m1h_A 81 LTFWVCAQ-DAN-YASEHYAVYASSTGNDASNFANALLEEVLTAKTVVTAPEAIRGTRAQGTWYQKTVQLPA-GTKYVAF 157 (178)
T ss_dssp EEEEEEES-STT-SCCCEEEEEEESSCCSGGGCCSCSEEEECCCSCCC--CCSSCCCSCCCCCEEEEEEECT-TCCEEEE
T ss_pred EEEEEEcC-CCC-CCCceEEEEEEcCCCChhHceeeeeeeecccceecccccccccccCCCeEEEEEEeCCC-CCEEEEE
Confidence 45454444 222 268999999999886 44432110000011 112222567778875 4799999
Q ss_pred EEEc-CCe-eEEEEEEEEEe
Q psy16320 195 QMYF-SNK-WLLISEIMFQS 212 (214)
Q Consensus 195 ~l~f-a~~-Wl~iSEI~F~S 212 (214)
+-+. .+. .++||.|+|++
T Consensus 158 ~h~~std~~~l~iDDI~i~~ 177 (178)
T 3m1h_A 158 RHFGCTDFFWINLDDVVITS 177 (178)
T ss_dssp EEESCCSSCEEEEEEEEEEE
T ss_pred EEecCCCceEEEeeeEEEec
Confidence 8876 455 56699999975
No 63
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=56.04 E-value=24 Score=32.45 Aligned_cols=42 Identities=14% Similarity=0.207 Sum_probs=34.0
Q ss_pred cEEEEEEcCceEEEe-EEEEEEecccCCceeeeeEEEEEEEeC-Cccccc
Q psy16320 114 PVEMVFEFDRVRNFT-AMHLHINNYYSKDIQVFSHANVYLSLG-GRQFSL 161 (214)
Q Consensus 114 ~VeitFeF~~~rnfs-~v~ih~~n~~~~~V~~f~~v~v~fS~d-G~~f~~ 161 (214)
.|.||++|++.=.|+ .|.+.+ +.+ -|....|+=|.| |++|+.
T Consensus 131 ~V~itLdL~~~f~~t~~i~l~F-~sp-----RP~am~ierS~D~G~tW~p 174 (426)
T 3zyj_B 131 QVNITLSWSKTIELTDNIVITF-ESG-----RPDQMILEKSLDYGRTWQP 174 (426)
T ss_dssp CEEEEEEEEEEEEECSCEEEEE-SSC-----CCSEEEEEEESSTTSSCEE
T ss_pred ceeEEEcCCCcEEEEEEEEeec-CCC-----CCCeEEEEeccCCCCCcee
Confidence 699999999999998 587777 233 377788999999 999854
No 64
>2vm9_A Discoidin-2, discoidin II; DDR, lectin, aggregation, cell adhesion; 1.75A {Dictyostelium discoideum} PDB: 2vmc_A* 2vmd_A* 2vme_A*
Probab=54.24 E-value=2.3 Score=36.19 Aligned_cols=19 Identities=16% Similarity=0.223 Sum_probs=13.8
Q ss_pred ceeeEEee-CCCccCCceEEEeCC
Q psy16320 16 GKVHFLLG-ADEEQNQGLVSYTMP 38 (214)
Q Consensus 16 ~~~~~~l~-~GC~w~dglvsYs~P 38 (214)
+..|||+| |||... +|++|
T Consensus 143 ~~i~lR~El~Gc~~~----~~~~~ 162 (257)
T 2vm9_A 143 NHISLRWELYALPVK----SYSNP 162 (257)
T ss_dssp SSCEEEEEEEECCCC----TTSSC
T ss_pred CceEEEEEeccCCcc----ccccc
Confidence 35899999 999953 45554
No 65
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=51.39 E-value=25 Score=31.61 Aligned_cols=43 Identities=7% Similarity=0.153 Sum_probs=34.1
Q ss_pred CcEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeC-Cccccc
Q psy16320 113 KPVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLG-GRQFSL 161 (214)
Q Consensus 113 ~~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~d-G~~f~~ 161 (214)
..|.||++|++.=.|+.|.|.+.+- -|....|+=|.| |++|+.
T Consensus 100 ~~VtitLdL~~~f~~t~v~i~F~~~------rP~~m~Iers~d~G~tw~p 143 (375)
T 4aqt_A 100 NSINLTLHLGKAFDITYVRLKFHTS------RPESFAIYKRTREDGPWIP 143 (375)
T ss_dssp CCEEEEEEEEEEEEEEEEEEEESSS------CCSEEEEEEESSSSSCCEE
T ss_pred cceEEEEcCCCeEEEEEEEEEecCC------CCCcEEEEEecCCCCCccc
Confidence 4699999999999999999998532 266666777776 888864
No 66
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=49.65 E-value=79 Score=23.65 Aligned_cols=102 Identities=12% Similarity=0.083 Sum_probs=54.3
Q ss_pred cceEEeecCCCCCCCcEEEEEEcCceEEEeEEEEEEecccCCceeeeeEEEEEEEeCCccccccceeeecCCCcccccce
Q psy16320 99 YEWIGWRNESFPYGKPVEMVFEFDRVRNFTAMHLHINNYYSKDIQVFSHANVYLSLGGRQFSLEPIQFTYMPDTIMEKAR 178 (214)
Q Consensus 99 ~~WVGW~n~~~~~~~~VeitFeF~~~rnfs~v~ih~~n~~~~~V~~f~~v~v~fS~dG~~f~~~~~~~~~~~d~~~~~ar 178 (214)
..||+..+.. +..|+.+++..+.- -..|.++..|-... .+. +.++.||..- ...+.+....+-......
T Consensus 29 ~gyv~~~~~~---g~~v~~~V~v~~aG-~Y~l~~ryan~~~~----~~~--~~l~VNG~~~-~~~v~~p~Tg~w~~w~~~ 97 (144)
T 2w47_A 29 SCYVNYHNEV---GGYIEWNVNAPSSG-SYALIFRYANGTTA----NRP--MRITVNGNIV-KPSMDFVSTGAWTTWNEA 97 (144)
T ss_dssp TCEEEECSST---TCEEEEEEEESSSE-EEEEEEEEECCSSS----CCC--EEEEETTEEE-EEEECCCCCSSTTCCEEE
T ss_pred ccEEcCCCCC---CCEEEEEEECCCCc-EEEEEEEEECCCCC----CeE--EEEEECCeEe-eeEEEecCCCCCCeeEEE
Confidence 4577766543 55687777765543 35677777765432 233 3345688642 112233212111122223
Q ss_pred EEEEeCCCceee-EEEEEEEcCCeeEEEEEEEEEec
Q psy16320 179 NVTIKLHHKQAK-YLKLQMYFSNKWLLISEIMFQSV 213 (214)
Q Consensus 179 ~vti~l~~r~ar-~VKi~l~fa~~Wl~iSEI~F~S~ 213 (214)
.+.+.|. .|. -|||.......|+.||-|.|...
T Consensus 98 ~~~v~L~--aG~ntI~l~~~~~~g~~niD~i~v~~~ 131 (144)
T 2w47_A 98 GIVANLN--QGNNVIRATAIASDGGPNVDYLKVFSA 131 (144)
T ss_dssp EEEEEEC--SEEEEEEEEECSTTCCCEEEEEEEEEC
T ss_pred EEEEEEC--CCccEEEEEEeCCCCCEEEeEEEEEeC
Confidence 4556663 454 35555434456899999998753
No 67
>3km5_A Lysine specific cysteine protease; beta jelly roll barrel, cleaved adhesin family, Lys-gingipai hemagglutination domain, cell invasion; 1.40A {Porphyromonas gingivalis}
Probab=47.71 E-value=1.1e+02 Score=24.75 Aligned_cols=35 Identities=23% Similarity=0.421 Sum_probs=26.9
Q ss_pred eEEEEeCCCceeeEEEEEEEc--CCeeEEEEEEEEEec
Q psy16320 178 RNVTIKLHHKQAKYLKLQMYF--SNKWLLISEIMFQSV 213 (214)
Q Consensus 178 r~vti~l~~r~ar~VKi~l~f--a~~Wl~iSEI~F~S~ 213 (214)
..++++|.. -.+||=++-+. ...+|+||.|+|.+.
T Consensus 143 ~~~~v~Lp~-gt~Y~A~~h~~~~d~~~~~iDDv~~~~~ 179 (180)
T 3km5_A 143 IERTVDLPA-GTKYVAFRHYNCSDLNYILLDDIQFTMG 179 (180)
T ss_dssp EEEEEECCT-TCCEEEEEEESCCSSCEEEEEEEEEEC-
T ss_pred EEEEEeCCC-CCeEEEEEEecCCCceEEEeeeEEEEeC
Confidence 456778876 57999998776 456899999999864
No 68
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=44.13 E-value=51 Score=29.41 Aligned_cols=43 Identities=14% Similarity=0.230 Sum_probs=33.9
Q ss_pred CcEEEEEEcCceEEEe-EEEEEEecccCCceeeeeEEEEEEEeC-Cccccc
Q psy16320 113 KPVEMVFEFDRVRNFT-AMHLHINNYYSKDIQVFSHANVYLSLG-GRQFSL 161 (214)
Q Consensus 113 ~~VeitFeF~~~rnfs-~v~ih~~n~~~~~V~~f~~v~v~fS~d-G~~f~~ 161 (214)
..|.||++|++.-.|+ .|.+.+. .+ -|....++=|.| |++|+.
T Consensus 102 ~~VnlTL~L~k~felt~~iil~F~-sp-----RP~sm~ierS~D~G~tW~P 146 (338)
T 3tbd_A 102 LEANITLSWNKTVELTDDVVMTFE-YG-----RPTVMVLEKSLDNGRTWQP 146 (338)
T ss_dssp CCEEEEEEEEEEEEECSCEEEEES-SC-----CCSEEEEEEESSTTSSCEE
T ss_pred ccceEEEcCCCeEEEEEEEEeecC-CC-----CCCeEEEEeccCCCCCcee
Confidence 3699999999998888 5777763 22 377788999999 998865
No 69
>2ijr_A Hypothetical protein API92; structural genomics, PSI, protein structure initiative; 2.70A {Yersinia pseudotuberculosis} SCOP: e.66.1.1
Probab=25.44 E-value=13 Score=32.67 Aligned_cols=48 Identities=17% Similarity=0.223 Sum_probs=37.1
Q ss_pred CcceeeecccccCCCccccccCC-CCCcceEEeecCCCCCCCcEEEEEEcCceE
Q psy16320 73 GGLGQLTDGQIGADNFKMDAKSR-NKGYEWIGWRNESFPYGKPVEMVFEFDRVR 125 (214)
Q Consensus 73 gGlGqLtDGi~G~dnf~~~~~~~-~~g~~WVGW~n~~~~~~~~VeitFeF~~~r 125 (214)
+|.|.|..|+--+-++....|++ ||.+.=+.|.++.. =.|+.+||.+-
T Consensus 182 NGnGgLL~Gv~Tt~~lY~~~YG~ewP~Gh~~~~~r~g~-----~~L~v~FDTPW 230 (300)
T 2ijr_A 182 NGNSQLLTGVSTTHDLYSHLYGMAWPSGQNIIWQRDRI-----NSLRLDFDSPS 230 (300)
T ss_dssp HTTSSSSTTCCCHHHHHHHHHSSSSCSCEEEEEEEEET-----TEEEEEEEEES
T ss_pred cCCCccccCCcchHHHHHHHhccccCCCCceeEEeCCC-----CeEEEeccCCC
Confidence 56889999998888887777886 88888899998753 35777777653
No 70
>1uxz_A Cellulase B; carbohydrate binding module, CBM6, mixted BETA1, 3-1, 4 linked glucan; 1.4A {Cellvibrio mixtus} SCOP: b.18.1.10 PDB: 1uy0_A* 1uyx_A* 1uyy_A* 1uyz_A* 1uz0_A*
Probab=22.57 E-value=2.3e+02 Score=20.73 Aligned_cols=20 Identities=5% Similarity=-0.090 Sum_probs=11.8
Q ss_pred EEEEcCCeeEEEEEEEEEec
Q psy16320 194 LQMYFSNKWLLISEIMFQSV 213 (214)
Q Consensus 194 i~l~fa~~Wl~iSEI~F~S~ 213 (214)
|+|.|.+..+=||-|.|...
T Consensus 111 l~l~~~~g~~nld~~~f~~~ 130 (131)
T 1uxz_A 111 FGIKANAGGWNLNWIRINKT 130 (131)
T ss_dssp EEEEEEECCCEEEEEEEEEC
T ss_pred EEEEEcCCCEEEEEEEEEEC
Confidence 34444334677788887654
No 71
>4djb_A E4-ORF3; adenovirus protein, RRM-like fold, HPV E2 DBD-like protein, suppressor inactivation, nucleus, viral protein; 2.05A {Human adenovirus 5}
Probab=22.36 E-value=34 Score=26.31 Aligned_cols=13 Identities=23% Similarity=0.179 Sum_probs=9.2
Q ss_pred ccCCCceeeEEee
Q psy16320 11 EEQNPGKVHFLLG 23 (214)
Q Consensus 11 ~~~~p~~~~~~l~ 23 (214)
-||.|-|+|+|+.
T Consensus 10 ~~~~~Mk~CLRm~ 22 (130)
T 4djb_A 10 HSQDPMIRCLRLK 22 (130)
T ss_dssp ---CCCEEEEEEE
T ss_pred cccCHHHHHHHHH
Confidence 4899999999985
Done!