BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy16324
         (251 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P48613|TIPE_DROME Protein tipE OS=Drosophila melanogaster GN=tipE PE=2 SV=1
          Length = 452

 Score = 87.0 bits (214), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 40/93 (43%), Positives = 54/93 (58%)

Query: 35  EPEEQTTLQKAKFYVSLCSGVTACLSAFAFLFLIPFIIEPAIKTIMADYEAEPVTCNISR 94
           E +++T  +K  FY +    +    S FAFLFL+PF+IEPA  TI   +E  P  C    
Sbjct: 4   EQDKRTGKEKLLFYTTAFFILLGTFSLFAFLFLVPFVIEPAFTTIFMQFEEVPALCETYD 63

Query: 95  HDINLGISNCNWASCREGCTAQMIKCHQISVHY 127
            +I  G  NC+W+SCREGCT  +  C QI V+Y
Sbjct: 64  TEIYYGAKNCSWSSCREGCTKDIYTCTQIRVNY 96



 Score = 57.4 bits (137), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 10/88 (11%)

Query: 152 RFLINTEGCGYPPGTNCTNFVKQYGLPESPSQKSSPPKPFPCYYSKVFPTLHVVAKYNWD 211
           R   N +GCGYPP  NCT ++K+Y         +     FPCYYSKV P+L V++  ++ 
Sbjct: 222 RLFPNVKGCGYPPMLNCTIWLKRY---------TKIGMKFPCYYSKVDPSL-VISDLDYW 271

Query: 212 DNLRYLILALVVPIVLFFGSLTILGYWY 239
            N   L+ ++ +PI  F  S+  L Y Y
Sbjct: 272 QNTLNLVYSMAIPIPSFIISVIYLTYAY 299


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.137    0.433 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,004,452
Number of Sequences: 539616
Number of extensions: 4699057
Number of successful extensions: 61460
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 626
Number of HSP's successfully gapped in prelim test: 179
Number of HSP's that attempted gapping in prelim test: 44417
Number of HSP's gapped (non-prelim): 11652
length of query: 251
length of database: 191,569,459
effective HSP length: 115
effective length of query: 136
effective length of database: 129,513,619
effective search space: 17613852184
effective search space used: 17613852184
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)