BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16327
(994 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1ND7|A Chain A, Conformational Flexibility Underlies Ubiquitin Ligation
Mediated By The Wwp1 Hect Domain E3 Ligase
Length = 374
Score = 349 bits (895), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 159/212 (75%), Positives = 184/212 (86%)
Query: 693 SFRWKLSQFRYLCHHNVLPSHIKITVARQTLFEDSYHQVMRLPAYELRRRLYIIFRGEEG 752
FRWKL+ FRYLC N LPSH+KI V+RQTLFEDS+ Q+M L Y+LRRRLY+IFRGEEG
Sbjct: 3 GFRWKLAHFRYLCQSNALPSHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEG 62
Query: 753 LDYGGVSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLLYFKFIGRFIA 812
LDYGG++REWFFLLSHEVLNPMYCLFEYA KNNY LQINPAS +NPDHL YF FIGRFIA
Sbjct: 63 LDYGGLAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIA 122
Query: 813 MALYHGRFIYSGFTMPFYKRMLNKKLVMKDIESIDPEFYNSLVWIRDNNIDECGLELYLS 872
MAL+HG+FI +GF++PFYKRML+KKL +KD+ESID EFYNSL+WIRDNNI+ECGLE+Y S
Sbjct: 123 MALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEECGLEMYFS 182
Query: 873 VDFEILGQVIHHELKENGDKIRVCEENKEEYM 904
VD EILG+V H+LK G I V EENK+EY+
Sbjct: 183 VDMEILGKVTSHDLKLGGSNILVTEENKDEYI 214
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 68/76 (89%)
Query: 48 DFYPRLMTEWRMTRGIEEQTKAFLDGFNEVVPIEWLKYFDERELELILCGMQEIDVEDWQ 107
D Y LMTEWR +RG++EQTKAFLDGFNEVVP++WL+YFDE+ELE++LCGMQE+D+ DWQ
Sbjct: 211 DEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQ 270
Query: 108 RNAIYRHYTRNSKQTT 123
RN +YRHYTRNSKQ
Sbjct: 271 RNTVYRHYTRNSKQII 286
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 44/46 (95%)
Query: 944 RFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYDQMVEKLNYAIEETE 989
+FCIEKVGKDTWLPRSHTCFNRLDLPPYKSY+Q+ EKL +AIEETE
Sbjct: 329 KFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETE 374
>pdb|3TUG|A Chain A, Crystal Structure Of The Hect Domain Of Itch E3 Ubiquitin
Ligase
Length = 398
Score = 322 bits (826), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 147/218 (67%), Positives = 181/218 (83%)
Query: 688 KAYERSFRWKLSQFRYLCHHNVLPSHIKITVARQTLFEDSYHQVMRLPAYELRRRLYIIF 747
+ Y R F+ K+ FR+ C +P HIKITV R+TLFEDS+ Q+M +LRRRL++IF
Sbjct: 17 QGYVRDFKAKVQYFRFWCQQLAMPQHIKITVTRKTLFEDSFQQIMSFSPQDLRRRLWVIF 76
Query: 748 RGEEGLDYGGVSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLLYFKFI 807
GEEGLDYGGV+REWFFLLSHEV NPMYCLFEYA K+NY LQINPASY+NPDHL YF+FI
Sbjct: 77 PGEEGLDYGGVAREWFFLLSHEVSNPMYCLFEYAGKDNYCLQINPASYINPDHLKYFRFI 136
Query: 808 GRFIAMALYHGRFIYSGFTMPFYKRMLNKKLVMKDIESIDPEFYNSLVWIRDNNIDECGL 867
GRFIAMAL+HG+FI +GF++PFYKR+LNK + +KD+ESIDPEFYNSL+W+++NNI+EC L
Sbjct: 137 GRFIAMALFHGKFIDTGFSLPFYKRILNKPVGLKDLESIDPEFYNSLIWVKENNIEECDL 196
Query: 868 ELYLSVDFEILGQVIHHELKENGDKIRVCEENKEEYMR 905
E+Y SVD EILG++ H+LK NG I V EENKEEY+R
Sbjct: 197 EMYFSVDKEILGEIKSHDLKPNGGNILVTEENKEEYIR 234
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 46/74 (62%), Positives = 63/74 (85%)
Query: 50 YPRLMTEWRMTRGIEEQTKAFLDGFNEVVPIEWLKYFDERELELILCGMQEIDVEDWQRN 109
Y R++ EWR++RG+EEQT+AF +GFNE++P ++L+YFD +ELE++LCGMQEID+ DWQR+
Sbjct: 232 YIRMVAEWRLSRGVEEQTQAFFEGFNEILPQQYLQYFDAKELEVLLCGMQEIDLNDWQRH 291
Query: 110 AIYRHYTRNSKQTT 123
AIYR Y R SKQ
Sbjct: 292 AIYRRYARTSKQIM 305
Score = 98.2 bits (243), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 43/51 (84%), Positives = 48/51 (94%)
Query: 944 RFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYDQMVEKLNYAIEETEGFGQE 994
+FCIEKVGK+ WLPRSHTCFNRLDLPPYKSY+Q+ EKL +AIEETEGFGQE
Sbjct: 348 KFCIEKVGKENWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETEGFGQE 398
>pdb|3OLM|A Chain A, Structure And Function Of A Ubiquitin Binding Site Within
The Catalytic Domain Of A Hect Ubiquitin Ligase
Length = 429
Score = 264 bits (675), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 134/275 (48%), Positives = 182/275 (66%), Gaps = 6/275 (2%)
Query: 642 PLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPRPGVPKDQKGAYGVPKAYERSFRWKLSQF 701
PLP GWE+R T YFVDHNT++TT++DPR DQ VP+ Y+R FR K+ F
Sbjct: 8 PLPSGWEMRLTNTARVYFVDHNTKTTTWDDPRLPSSLDQN----VPQ-YKRDFRRKVIYF 62
Query: 702 RYLCHHNVLPSHIKITVARQTLFEDSYHQVMRLPAYELRRRLYIIFRGEEGLDYGGVSRE 761
R +LP I V R+ +FED+Y ++MR +L++RL I F GEEGLDYGGVSRE
Sbjct: 63 RSQPALRILPGQCHIKVRRKNIFEDAYQEIMRQTPEDLKKRLMIKFDGEEGLDYGGVSRE 122
Query: 762 WFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLLYFKFIGRFIAMALYHGRFI 821
+FFLLSHE+ NP YCLFEY+ +NY++QINP S +NP+HL YFKFIGR + + ++H RF+
Sbjct: 123 FFFLLSHEMFNPFYCLFEYSAYDNYTIQINPNSGINPEHLNYFKFIGRVVGLGVFHRRFL 182
Query: 822 YSGFTMPFYKRMLNKKLVMKDIESIDPEFYNSLVWIRDNNIDECGLELYLSVDFEILGQV 881
+ F YK ML KK+V++D+E +D E YNSL W+ +N+ID L+L S D E G+V
Sbjct: 183 DAFFVGALYKMMLRKKVVLQDMEGVDAEVYNSLNWMLENSIDGV-LDLTFSADDERFGEV 241
Query: 882 IHHELKENGDKIRVCEENKEEYMRWYGSGSSCERA 916
+ +LK +G I V + NK+EY+ Y +R
Sbjct: 242 VTVDLKPDGRNIEVTDGNKKEYVELYTQWRIVDRV 276
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 50/66 (75%)
Query: 50 YPRLMTEWRMTRGIEEQTKAFLDGFNEVVPIEWLKYFDERELELILCGMQEIDVEDWQRN 109
Y L T+WR+ ++EQ KAF+DGFNE++P + + FDERELEL++ G+ EID+EDW+++
Sbjct: 263 YVELYTQWRIVDRVQEQFKAFMDGFNELIPEDLVTVFDERELELLIGGIAEIDIEDWKKH 322
Query: 110 AIYRHY 115
YR Y
Sbjct: 323 TDYRGY 328
Score = 72.8 bits (177), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 38/51 (74%)
Query: 944 RFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYDQMVEKLNYAIEETEGFGQE 994
RF IEK G+ LP+SHTCFNR+DLP Y YD M +KL A+EET GFGQE
Sbjct: 379 RFTIEKAGEVQQLPKSHTCFNRVDLPQYVDYDSMKQKLTLAVEETIGFGQE 429
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
PLP GWE+R RVY+VDHNT++TTW P
Sbjct: 8 PLPSGWEMRLTNTARVYFVDHNTKTTTWDDP 38
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
PLP GWE+R RVY+VDHNT++TTW P
Sbjct: 8 PLPSGWEMRLTNTARVYFVDHNTKTTTWDDP 38
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 6/51 (11%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQPLPPGWE-----LRRDPRGRVYY 422
GWE+R R Y+VDHNT++++W+ P+ LP + +RD R +V Y
Sbjct: 12 GWEMRLTNTARVYFVDHNTKTTTWDDPR-LPSSLDQNVPQYKRDFRRKVIY 61
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 26/42 (61%), Gaps = 6/42 (14%)
Query: 491 GRRYYVDHNTRSSSWERPQPLPPGWE-----LRRDPRGRVYY 527
R Y+VDHNT++++W+ P+ LP + +RD R +V Y
Sbjct: 21 ARVYFVDHNTKTTTWDDPR-LPSSLDQNVPQYKRDFRRKVIY 61
>pdb|1ZVD|A Chain A, Regulation Of Smurf2 Ubiquitin Ligase Activity By
Anchoring The E2 To The Hect Domain
Length = 380
Score = 213 bits (541), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 103/196 (52%), Positives = 138/196 (70%), Gaps = 1/196 (0%)
Query: 712 SHIKITVARQTLFEDSYHQVMRLPAYELRRRLYIIFRGEEGLDYGGVSREWFFLLSHEVL 771
H +I V+R+ +FE+SY QV + +L +RL I FRGEEGLDYGGV+REW +LLSHE L
Sbjct: 23 GHCRIEVSREEIFEESYRQVXKXRPKDLWKRLXIKFRGEEGLDYGGVAREWLYLLSHEXL 82
Query: 772 NPMYCLFEYANKNNYSLQINPASYVNPDHLLYFKFIGRFIAMALYHGRFIYSGFTMPFYK 831
NP Y LF+Y+ + Y+LQINP S VNP+HL YF F+GR A++HG +I GFT+PFYK
Sbjct: 83 NPYYGLFQYSRDDIYTLQINPDSAVNPEHLSYFHFVGRIXGXAVFHGHYIDGGFTLPFYK 142
Query: 832 RMLNKKLVMKDIESIDPEFYNSLVWIRDNNIDECGLELYLSVDFEILGQVIHHELKENGD 891
++L K + + D E +DP+ +NSLVWI +N+I L+ V+ G++I HELK NG
Sbjct: 143 QLLGKSITLDDXELVDPDLHNSLVWILENDITGV-LDHTFCVEHNAYGEIIQHELKPNGK 201
Query: 892 KIRVCEENKEEYMRWY 907
I V EENK+EY+R Y
Sbjct: 202 SIPVNEENKKEYVRLY 217
Score = 80.5 bits (197), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 46/70 (65%)
Query: 50 YPRLMTEWRMTRGIEEQTKAFLDGFNEVVPIEWLKYFDERELELILCGMQEIDVEDWQRN 109
Y RL WR RGIE Q A GFNEV+P LK FDE+ELELI+CG+ +IDV DW+ N
Sbjct: 213 YVRLYVNWRFLRGIEAQFLALQKGFNEVIPQHLLKTFDEKELELIICGLGKIDVNDWKVN 272
Query: 110 AIYRHYTRNS 119
+H T +S
Sbjct: 273 TRLKHCTPDS 282
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/39 (64%), Positives = 33/39 (84%)
Query: 956 LPRSHTCFNRLDLPPYKSYDQMVEKLNYAIEETEGFGQE 994
LP++HTCFNR+D+PPY+SY+++ EKL AIEET GF E
Sbjct: 342 LPKAHTCFNRIDIPPYESYEKLYEKLLTAIEETCGFAVE 380
>pdb|2XBB|A Chain A, Nedd4 Hect:ub Complex
pdb|2XBB|B Chain B, Nedd4 Hect:ub Complex
pdb|2XBF|A Chain A, Nedd4 Hect Structure
Length = 386
Score = 197 bits (502), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 138/205 (67%), Gaps = 4/205 (1%)
Query: 702 RYLCHHNVLPSHIKITVARQTLFEDSYHQVMRLP-AYELRRRLYIIFRGEEGLDYGGVSR 760
R L N +P+ ++ + R T+ EDSY ++M + A L+ RL+I F GE+GLDYGGV+R
Sbjct: 17 RKLKKQNDIPNKFEMKLRRATVLEDSYRRIMGVKRADFLKARLWIEFDGEKGLDYGGVAR 76
Query: 761 EWFFLLSHEVLNPMYCLFEYANKNNYSLQINPAS-YVNPDHLLYFKFIGRFIAMALYHGR 819
EWFFL+S E+ NP Y LFEY+ +NY+LQINP S N DHL YFKFIGR MA+YHG+
Sbjct: 77 EWFFLISKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAVYHGK 136
Query: 820 FIYSGFTMPFYKRMLNKKLVMKDIESIDPEFYNSLVWIRDNNIDECGLELYLSVDFEILG 879
+ F PFYK ML+K + + D+ES+D E+YNSL WI +N D L+L +D E+ G
Sbjct: 137 LLDGFFIRPFYKMMLHKPITLHDMESVDSEYYNSLRWILEN--DPTELDLRFIIDEELFG 194
Query: 880 QVIHHELKENGDKIRVCEENKEEYM 904
Q HELK G +I V +NK+EY+
Sbjct: 195 QTHQHELKNGGSEIVVTNKNKKEYI 219
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 50 YPRLMTEWRMTRGIEEQTKAFLDGFNEVVPIEWLKYFDERELELILCGMQEIDVEDWQRN 109
Y L+ +WR I++Q AF +GF E++P + +K FDE ELEL++CG+ ++DV DW+ +
Sbjct: 218 YIYLVIQWRFVNRIQKQMAAFKEGFFELIPQDLIKIFDENELELLMCGLGDVDVNDWREH 277
Query: 110 AIYRH-YTRN 118
Y++ Y+ N
Sbjct: 278 TKYKNGYSAN 287
Score = 63.2 bits (152), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 37/47 (78%)
Query: 945 FCIEKVGKDTWLPRSHTCFNRLDLPPYKSYDQMVEKLNYAIEETEGF 991
F +E+ G LPR+HTCFNRLDLPPY+S++++ +KL AIE T+GF
Sbjct: 336 FTVEQWGTPEKLPRAHTCFNRLDLPPYESFEELWDKLQMAIENTQGF 382
>pdb|3JVZ|C Chain C, E2~ubiquitin-Hect
pdb|3JVZ|D Chain D, E2~ubiquitin-Hect
Length = 385
Score = 186 bits (473), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 138/217 (63%), Gaps = 5/217 (2%)
Query: 691 ERSFRWKLSQFRY-LCHHNVLPSHIKITVARQTLFEDSYHQVMRLPAYE-LRRRLYIIFR 748
E F+ K FR L +P+ ++ + R +FE+SY ++M + + L+ RL+I F
Sbjct: 4 EFEFKQKYDYFRKKLKKPADIPNRFEMKLHRNNIFEESYRRIMSVKRPDVLKARLWIEFE 63
Query: 749 GEEGLDYGGVSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPAS-YVNPDHLLYFKFI 807
E+GLDYGGV+REWFFLLS E+ NP Y LFEY+ +NY+LQINP S N DHL YF FI
Sbjct: 64 SEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFTFI 123
Query: 808 GRFIAMALYHGRFIYSGFTMPFYKRMLNKKLVMKDIESIDPEFYNSLVWIRDNNIDECGL 867
GR +A++HG+ + F PFYK ML K++ + D+ES+D E+YNSL WI +N D L
Sbjct: 124 GRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSEYYNSLKWILEN--DPTEL 181
Query: 868 ELYLSVDFEILGQVIHHELKENGDKIRVCEENKEEYM 904
+L +D E GQ +LK NG +I V ENK EY+
Sbjct: 182 DLMFCIDEENFGQTYQVDLKPNGSEIMVTNENKREYI 218
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 50/65 (76%)
Query: 50 YPRLMTEWRMTRGIEEQTKAFLDGFNEVVPIEWLKYFDERELELILCGMQEIDVEDWQRN 109
Y L+ +WR +++Q AFL+GF E++PI+ +K FDE ELEL++CG+ ++DV DW+++
Sbjct: 217 YIDLVIQWRFVNRVQKQMNAFLEGFTELLPIDLIKIFDENELELLMCGLGDVDVNDWRQH 276
Query: 110 AIYRH 114
+IY++
Sbjct: 277 SIYKN 281
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 945 FCIEKVGKDTWLPRSHTCFNRLDLPPYKSYDQMVEKLNYAIEETEGF 991
F IE+ G LPR+HT FNRLDLPPY++++ + EKL A+E +GF
Sbjct: 335 FTIEQWGSPEKLPRAHTAFNRLDLPPYETFEDLREKLLMAVENAQGF 381
>pdb|3JW0|C Chain C, E2~ubiquitin-Hect
pdb|3JW0|D Chain D, E2~ubiquitin-Hect
Length = 385
Score = 186 bits (472), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 138/217 (63%), Gaps = 5/217 (2%)
Query: 691 ERSFRWKLSQFRY-LCHHNVLPSHIKITVARQTLFEDSYHQVMRLPAYE-LRRRLYIIFR 748
E F+ K FR L +P+ ++ + R +FE+SY ++M + + L+ RL+I F
Sbjct: 4 EFEFKQKYDYFRKKLKKPADIPNRFEMKLHRNNIFEESYRRIMSVKRPDVLKARLWIEFE 63
Query: 749 GEEGLDYGGVSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPAS-YVNPDHLLYFKFI 807
E+GLDYGGV+REWFFLLS E+ NP Y LFEY+ +NY+LQINP S N DHL YF FI
Sbjct: 64 SEKGLDYGGVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFTFI 123
Query: 808 GRFIAMALYHGRFIYSGFTMPFYKRMLNKKLVMKDIESIDPEFYNSLVWIRDNNIDECGL 867
GR +A++HG+ + F PFYK ML K++ + D+ES+D E+YNSL WI +N D L
Sbjct: 124 GRVAGLAVFHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSEYYNSLKWILEN--DPTEL 181
Query: 868 ELYLSVDFEILGQVIHHELKENGDKIRVCEENKEEYM 904
+L +D E GQ +LK NG +I V ENK EY+
Sbjct: 182 DLMFCIDEENFGQTYQVDLKPNGSEIMVTNENKREYI 218
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 50/65 (76%)
Query: 50 YPRLMTEWRMTRGIEEQTKAFLDGFNEVVPIEWLKYFDERELELILCGMQEIDVEDWQRN 109
Y L+ +WR +++Q AFL+GF E++PI+ +K FDE ELEL++CG+ ++DV DW+++
Sbjct: 217 YIDLVIQWRFVNRVQKQMNAFLEGFTELLPIDLIKIFDENELELLMCGLGDVDVNDWRQH 276
Query: 110 AIYRH 114
+IY++
Sbjct: 277 SIYKN 281
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 945 FCIEKVGKDTWLPRSHTCFNRLDLPPYKSYDQMVEKLNYAIEETEGF 991
F IE+ G LPR+HT FNRLDLPPY++++ + EKL A+E +GF
Sbjct: 335 FTIEQWGSPEKLPRAHTSFNRLDLPPYETFEDLREKLLMAVENAQGF 381
>pdb|2ONI|A Chain A, Catalytic Domain Of The Human Nedd4-Like E3 Ligase
Length = 392
Score = 180 bits (456), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 133/216 (61%), Gaps = 5/216 (2%)
Query: 692 RSFRWKLSQFRY-LCHHNVLPSHIKITVARQTLFEDSYHQVMRLPAYE-LRRRLYIIFRG 749
R F+ K FR L +P+ + + R +FE+SY ++ + + L+ RL+I F
Sbjct: 20 REFKQKYDYFRKKLKKPADIPNRFEXKLHRNNIFEESYRRIXSVKRPDVLKARLWIEFES 79
Query: 750 EEGLDYGGVSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPAS-YVNPDHLLYFKFIG 808
E+GLDYGGV+REWFFLLS E NP Y LFEY+ +NY+LQINP S N DHL YF FIG
Sbjct: 80 EKGLDYGGVAREWFFLLSKEXFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFTFIG 139
Query: 809 RFIAMALYHGRFIYSGFTMPFYKRMLNKKLVMKDIESIDPEFYNSLVWIRDNNIDECGLE 868
R +A++HG+ + F PFYK L K++ + D ES+D E+YNSL WI +N D L+
Sbjct: 140 RVAGLAVFHGKLLDGFFIRPFYKXXLGKQITLNDXESVDSEYYNSLKWILEN--DPTELD 197
Query: 869 LYLSVDFEILGQVIHHELKENGDKIRVCEENKEEYM 904
L +D E GQ +LK NG +I V ENK EY+
Sbjct: 198 LXFCIDEENFGQTYQVDLKPNGSEIXVTNENKREYI 233
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 49/65 (75%)
Query: 50 YPRLMTEWRMTRGIEEQTKAFLDGFNEVVPIEWLKYFDERELELILCGMQEIDVEDWQRN 109
Y L+ +WR +++Q AFL+GF E++PI+ +K FDE ELEL+ CG+ ++DV DW+++
Sbjct: 232 YIDLVIQWRFVNRVQKQXNAFLEGFTELLPIDLIKIFDENELELLXCGLGDVDVNDWRQH 291
Query: 110 AIYRH 114
+IY++
Sbjct: 292 SIYKN 296
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%)
Query: 945 FCIEKVGKDTWLPRSHTCFNRLDLPPYKSYDQMVEKLNYAIE 986
F IE+ G LPR+HTCFNRLDLPPY++++ + EKL A+E
Sbjct: 350 FTIEQWGSPEKLPRAHTCFNRLDLPPYETFEDLREKLLXAVE 391
>pdb|3H1D|A Chain A, Structure Of The Huwe1 Hect Domain
Length = 405
Score = 166 bits (419), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 119/191 (62%)
Query: 714 IKITVARQTLFEDSYHQVMRLPAYELRRRLYIIFRGEEGLDYGGVSREWFFLLSHEVLNP 773
+ + V R +FEDSY ++ R E++ RLYI+F GEEG D GG+ REW+ ++S E+ NP
Sbjct: 48 MAVHVRRDHVFEDSYRELHRKSPEEMKNRLYIVFEGEEGQDAGGLLREWYMIISREMFNP 107
Query: 774 MYCLFEYANKNNYSLQINPASYVNPDHLLYFKFIGRFIAMALYHGRFIYSGFTMPFYKRM 833
MY LF + + + INP+S+ NP+HL YFKF+GR +A A+Y R + FT FYK +
Sbjct: 108 MYALFRTSPGDRVTYTINPSSHANPNHLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKHI 167
Query: 834 LNKKLVMKDIESIDPEFYNSLVWIRDNNIDECGLELYLSVDFEILGQVIHHELKENGDKI 893
L K + D+ES D FY LV++ +N++ G +L S + + G +LK NG I
Sbjct: 168 LGKSVRYTDMESEDYHFYQGLVYLLENDVSTLGYDLTFSTEVQEFGVAEVRDLKPNGANI 227
Query: 894 RVCEENKEEYM 904
V EENK+EY+
Sbjct: 228 LVTEENKKEYV 238
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 50 YPRLMTEWRMTRGIEEQTKAFLDGFNEVVPIEWLKYFDERELELILCGMQEIDVEDWQRN 109
Y L+ + RMT I +Q AFL+GF E++P + F E+ELEL++ G+ ID++D + N
Sbjct: 237 YVHLVCQMRMTGAIRKQLAAFLEGFYEIIPKRLISIFTEQELELLISGLPTIDIDDLKSN 296
Query: 110 AIYRHYTRNSKQ 121
Y Y NS Q
Sbjct: 297 TEYHKYQSNSIQ 308
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 926 SSLPGHAVFPWEDLPNSWRFCIEKVGKDT-WLPRSHTCFNRLDLPPYKSYDQMVEKLNYA 984
S +P E + +F I + + T LP +HTCFN+LDLP Y+S++++ L A
Sbjct: 335 SKVPLQGFAALEGMNGIQKFQIHRDDRSTDRLPSAHTCFNQLDLPAYESFEKLRHMLLLA 394
Query: 985 IEE-TEGFG 992
I+E +EGFG
Sbjct: 395 IQEASEGFG 403
>pdb|3G1N|A Chain A, Catalytic Domain Of The Human E3 Ubiquitin-Protein Ligase
Huwe1
pdb|3G1N|B Chain B, Catalytic Domain Of The Human E3 Ubiquitin-Protein Ligase
Huwe1
Length = 388
Score = 165 bits (418), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 119/191 (62%)
Query: 714 IKITVARQTLFEDSYHQVMRLPAYELRRRLYIIFRGEEGLDYGGVSREWFFLLSHEVLNP 773
+ + V R +FEDSY ++ R E++ RLYI+F GEEG D GG+ REW+ ++S E+ NP
Sbjct: 31 MAVHVRRDHVFEDSYRELHRKSPEEMKNRLYIVFEGEEGQDAGGLLREWYMIISREMFNP 90
Query: 774 MYCLFEYANKNNYSLQINPASYVNPDHLLYFKFIGRFIAMALYHGRFIYSGFTMPFYKRM 833
MY LF + + + INP+S+ NP+HL YFKF+GR +A A+Y R + FT FYK +
Sbjct: 91 MYALFRTSPGDRVTYTINPSSHCNPNHLSYFKFVGRIVAKAVYDNRLLECYFTRSFYKHI 150
Query: 834 LNKKLVMKDIESIDPEFYNSLVWIRDNNIDECGLELYLSVDFEILGQVIHHELKENGDKI 893
L K + D+ES D FY LV++ +N++ G +L S + + G +LK NG I
Sbjct: 151 LGKSVRYTDMESEDYHFYQGLVYLLENDVSTLGYDLTFSTEVQEFGVCEVRDLKPNGANI 210
Query: 894 RVCEENKEEYM 904
V EENK+EY+
Sbjct: 211 LVTEENKKEYV 221
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%)
Query: 50 YPRLMTEWRMTRGIEEQTKAFLDGFNEVVPIEWLKYFDERELELILCGMQEIDVEDWQRN 109
Y L+ + RMT I +Q AFL+GF E++P + F E+ELEL++ G+ ID++D + N
Sbjct: 220 YVHLVCQMRMTGAIRKQLAAFLEGFYEIIPKRLISIFTEQELELLISGLPTIDIDDLKSN 279
Query: 110 AIYRHYTRNSKQ 121
Y Y NS Q
Sbjct: 280 TEYHKYQSNSIQ 291
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 41/69 (59%), Gaps = 2/69 (2%)
Query: 926 SSLPGHAVFPWEDLPNSWRFCIEKVGKDT-WLPRSHTCFNRLDLPPYKSYDQMVEKLNYA 984
S +P E + +F I + + T LP +HTCFN+LDLP Y+S++++ L A
Sbjct: 318 SKVPLQGFAALEGMNGIQKFQIHRDDRSTDRLPSAHTCFNQLDLPAYESFEKLRHMLLLA 377
Query: 985 IEE-TEGFG 992
I+E +EGFG
Sbjct: 378 IQECSEGFG 386
>pdb|1TK7|A Chain A, Nmr Structure Of Ww Domains (Ww3-4) From Suppressor Of
Deltex
Length = 88
Score = 135 bits (341), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 64/83 (77%), Positives = 70/83 (84%), Gaps = 2/83 (2%)
Query: 592 DALGSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEPPLPPGWEIRY 651
DALG LP GWE+++Q D RVYFVNHKNRTTQWEDPRTQGQE+ I +E PLPPGWEIRY
Sbjct: 8 DALGPLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQGQEVSLI--NEGPLPPGWEIRY 65
Query: 652 TEDGTRYFVDHNTRSTTFEDPRP 674
T G R+FVDHNTR TTFEDPRP
Sbjct: 66 TAAGERFFVDHNTRRTTFEDPRP 88
Score = 59.7 bits (143), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 41/71 (57%), Gaps = 12/71 (16%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ------------PLPPGWELRRDPRGRVYYVD 424
GWE + + R Y+V+H R++ WE P+ PLPPGWE+R G ++VD
Sbjct: 16 GWEKKIQSDNRVYFVNHKNRTTQWEDPRTQGQEVSLINEGPLPPGWEIRYTAAGERFFVD 75
Query: 425 HNTRSTTWQRP 435
HNTR TT++ P
Sbjct: 76 HNTRRTTFEDP 86
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 12/69 (17%)
Query: 484 EEDADTYGRRYYVDHNTRSSSWERPQ------------PLPPGWELRRDPRGRVYYVDHN 531
E+ + R Y+V+H R++ WE P+ PLPPGWE+R G ++VDHN
Sbjct: 18 EKKIQSDNRVYFVNHKNRTTQWEDPRTQGQEVSLINEGPLPPGWEIRYTAAGERFFVDHN 77
Query: 532 TRSTTWQRP 540
TR TT++ P
Sbjct: 78 TRRTTFEDP 86
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 48/118 (40%), Gaps = 42/118 (35%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHVVSQGSQRFLYP 569
PLP GWE + RVY+V+H R+T W+ P + QG+ ++++
Sbjct: 12 PLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRT---------QGQEVSLINE-------- 54
Query: 570 QHXXXXXXXXXXXXXXXXTEEDDALGSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
G LP GWE R G +FV+H R T +EDPR
Sbjct: 55 -------------------------GPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPR 87
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 29/106 (27%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHVVSQGSQRFLYP 464
PLP GWE + RVY+V+H R+T W+ P + QG+ ++++G L P
Sbjct: 12 PLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRT---------QGQEVSLINEGP---LPP 59
Query: 465 QHXXXXXXXXXXXXXXXXTEEDADTYGRRYYVDHNTRSSSWERPQP 510
E G R++VDHNTR +++E P+P
Sbjct: 60 -----------------GWEIRYTAAGERFFVDHNTRRTTFEDPRP 88
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQP 405
GWEIR G R++VDHNTR +++E P+P
Sbjct: 60 GWEIRYTAAGERFFVDHNTRRTTFEDPRP 88
>pdb|1C4Z|A Chain A, Structure Of E6ap: Insights Into Ubiquitination Pathway
pdb|1C4Z|B Chain B, Structure Of E6ap: Insights Into Ubiquitination Pathway
pdb|1C4Z|C Chain C, Structure Of E6ap: Insights Into Ubiquitination Pathway
pdb|1D5F|A Chain A, Structure Of An E6ap-Ubch7 Complex: Insights Into The
Ubiquitination Pathway
pdb|1D5F|B Chain B, Structure Of An E6ap-Ubch7 Complex: Insights Into The
Ubiquitination Pathway
pdb|1D5F|C Chain C, Structure Of An E6ap-Ubch7 Complex: Insights Into The
Ubiquitination Pathway
Length = 358
Score = 96.3 bits (238), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 113/204 (55%), Gaps = 11/204 (5%)
Query: 710 LPSHIKITVARQTLFEDSYHQV----MRLPAYELRRRLYIIFRGEEGLDYGGVSREWFFL 765
L ++++ V R + +D+ ++ M PA +L+++LY+ F GE+G+D GGVS+E+F L
Sbjct: 2 LNPYLRLKVRRDHIIDDALVRLEMIAMENPA-DLKKQLYVEFEGEQGVDEGGVSKEFFQL 60
Query: 766 LSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLLYFKFIGRFIAMALYHGRFIYSGF 825
+ E+ NP +F Y +++ NP+S+ F IG + +A+Y+ + F
Sbjct: 61 VVEEIFNPDIGMFTY-DESTKLFWFNPSSFETEGQ---FTLIGIVLGLAIYNNCILDVHF 116
Query: 826 TMPFYKRMLNKKLVMKDIESIDPEFYNSL--VWIRDNNIDECGLELYLSVDFEILGQVIH 883
M Y++++ KK +D+ P Y SL + + N+++ + + ++ G +
Sbjct: 117 PMVVYRKLMGKKGTFRDLGDSHPVLYQSLKDLLEYEGNVEDDMMITFQISQTDLFGNPMM 176
Query: 884 HELKENGDKIRVCEENKEEYMRWY 907
++LKENGDKI + EN++E++ Y
Sbjct: 177 YDLKENGDKIPITNENRKEFVNLY 200
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 943 WRFCIEKVGKDTW-LPRSHTCFNRLDLPPYKSYDQMVEKLNYAIEETEGFGQ 993
+ I K G DT LP SHTCFN L LP Y S +++ E+L AI +GFG
Sbjct: 306 LKMIIAKNGPDTERLPTSHTCFNVLLLPEYSSKEKLKERLLKAITYAKGFGM 357
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 50 YPRLMTEWRMTRGIEEQTKAFLDGFNEVVPIEWLKY-FDERELELILCGMQEIDVEDWQR 108
+ L +++ + + +E+Q KAF GF+ V LKY F E+EL++CG + +D + +
Sbjct: 196 FVNLYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNLDFQALEE 255
Query: 109 NAIYR-HYTRNS 119
Y YTR+S
Sbjct: 256 TTEYDGGYTRDS 267
>pdb|2KXQ|A Chain A, Solution Structure Of Smurf2 Ww2 And Ww3 Bound To Smad7 Py
Motif Containing Peptide
Length = 90
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADE-PPLPPGWEIRYTEDG 655
LP G+E+R G+VYF++ + + W DPR +++ I +E PLPPGWEIR T G
Sbjct: 10 LPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVP-RDLSNINCEELGPLPPGWEIRNTATG 68
Query: 656 TRYFVDHNTRSTTFEDPR 673
YFVDHN R+T F DPR
Sbjct: 69 RVYFVDHNNRTTQFTDPR 86
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 38/73 (52%), Gaps = 14/73 (19%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ--------------PLPPGWELRRDPRGRVYY 422
G+E R G+ Y++ T S+W P+ PLPPGWE+R GRVY+
Sbjct: 13 GYEQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLPPGWEIRNTATGRVYF 72
Query: 423 VDHNTRSTTWQRP 435
VDHN R+T + P
Sbjct: 73 VDHNNRTTQFTDP 85
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 47/120 (39%), Gaps = 40/120 (33%)
Query: 508 PQPLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHVVSQGSQRFL 567
P LP G+E R +G+VY++ T +TW P R
Sbjct: 7 PPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPRVPR----------------------- 43
Query: 568 YPQHXXXXXXXXXXXXXXXXTEEDDALGSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
EE LG LP GWE R GRVYFV+H NRTTQ+ DPR
Sbjct: 44 --------------DLSNINCEE---LGPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPR 86
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 36/71 (50%), Gaps = 14/71 (19%)
Query: 484 EEDADTYGRRYYVDHNTRSSSWERPQ--------------PLPPGWELRRDPRGRVYYVD 529
E+ G+ Y++ T S+W P+ PLPPGWE+R GRVY+VD
Sbjct: 15 EQRTTQQGQVYFLHTQTGVSTWHDPRVPRDLSNINCEELGPLPPGWEIRNTATGRVYFVD 74
Query: 530 HNTRSTTWQRP 540
HN R+T + P
Sbjct: 75 HNNRTTQFTDP 85
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Query: 634 GQIGADEPPLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPRPGVPKD 679
G +G P LP G+E R T+ G YF+ T +T+ DPR VP+D
Sbjct: 1 GPLGGSPPDLPEGYEQRTTQQGQVYFLHTQTGVSTWHDPR--VPRD 44
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
GWEIR GR Y+VDHN R++ + P+
Sbjct: 59 GWEIRNTATGRVYFVDHNNRTTQFTDPR 86
>pdb|2NQ3|A Chain A, Crystal Structure Of The C2 Domain Of Human Itchy Homolog
E3 Ubiquitin Protein Ligase
Length = 173
Score = 71.2 bits (173), Expect = 3e-12, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 150 PNPYIELYVDYKNPKTTRVVKNTYQPKWNEEFTVLVSPYSIILFRLLDHRTFRRDCTIGE 209
P+PY+E+ VD ++ KT + NT PKW + TV+V+P S + FR+ H+T + D +G
Sbjct: 57 PSPYVEVTVDGQSKKTEKC-NNTNSPKWKQPLTVIVTPVSKLHFRVWSHQTLKSDVLLGT 115
Query: 210 KRLNIYGVLAHYNGKCEHLEITLDLMND 237
L+IY L N K E + +TL L D
Sbjct: 116 AALDIYETLKSNNMKLEEVVVTLQLGGD 143
>pdb|2JMF|A Chain A, Solution Structure Of The Su(Dx) Ww4- Notch Py Peptide
Complex
Length = 53
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 31/39 (79%), Positives = 33/39 (84%)
Query: 639 DEPPLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPRPGVP 677
+E PLPPGWEIRYT G R+FVDHNTR TTFEDPRPG P
Sbjct: 15 NEGPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPRPGAP 53
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
PLPPGWE+R G ++VDHNTR TT++ P
Sbjct: 18 PLPPGWEIRYTAAGERFFVDHNTRRTTFEDP 48
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
PLPPGWE+R G ++VDHNTR TT++ P
Sbjct: 18 PLPPGWEIRYTAAGERFFVDHNTRRTTFEDP 48
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQPLPP 408
GWEIR G R++VDHNTR +++E P+P P
Sbjct: 22 GWEIRYTAAGERFFVDHNTRRTTFEDPRPGAP 53
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 20/33 (60%)
Query: 595 GSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
G LP GWE R G +FV+H R T +EDPR
Sbjct: 17 GPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPR 49
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 18/23 (78%)
Query: 491 GRRYYVDHNTRSSSWERPQPLPP 513
G R++VDHNTR +++E P+P P
Sbjct: 31 GERFFVDHNTRRTTFEDPRPGAP 53
>pdb|2OP7|A Chain A, Ww4
Length = 39
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/37 (75%), Positives = 32/37 (86%)
Query: 639 DEPPLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPRPG 675
+E PLP GWEIRYT +G RYFVDHNTR+TTF+DPR G
Sbjct: 1 NEEPLPEGWEIRYTREGVRYFVDHNTRTTTFKDPRNG 37
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 404 QPLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
+PLP GWE+R G Y+VDHNTR+TT++ P
Sbjct: 3 EPLPEGWEIRYTREGVRYFVDHNTRTTTFKDP 34
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 24/32 (75%)
Query: 509 QPLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
+PLP GWE+R G Y+VDHNTR+TT++ P
Sbjct: 3 EPLPEGWEIRYTREGVRYFVDHNTRTTTFKDP 34
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
LP GWE R +G YFV+H RTT ++DPR
Sbjct: 5 LPEGWEIRYTREGVRYFVDHNTRTTTFKDPR 35
Score = 37.0 bits (84), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 22/28 (78%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
GWEIR G RY+VDHNTR+++++ P+
Sbjct: 8 GWEIRYTREGVRYFVDHNTRTTTFKDPR 35
>pdb|2JO9|A Chain A, Mouse Itch 3rd Ww Domain Complex With The Epstein-Barr
Virus Latent Membrane Protein 2a Derived Peptide
Eeppppyed
pdb|1YIU|A Chain A, Itch E3 Ubiquitin Ligase Ww3 Domain
Length = 37
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/36 (66%), Positives = 28/36 (77%)
Query: 593 ALGSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPRT 628
A+G LP GWE+R +GRVYFVNH R TQWEDPR+
Sbjct: 2 AMGPLPPGWEKRTDSNGRVYFVNHNTRITQWEDPRS 37
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNS 437
PLPPGWE R D GRVY+V+HNTR T W+ P S
Sbjct: 5 PLPPGWEKRTDSNGRVYFVNHNTRITQWEDPRS 37
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 25/33 (75%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNS 542
PLPPGWE R D GRVY+V+HNTR T W+ P S
Sbjct: 5 PLPPGWEKRTDSNGRVYFVNHNTRITQWEDPRS 37
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 24/32 (75%)
Query: 642 PLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
PLPPGWE R +G YFV+HNTR T +EDPR
Sbjct: 5 PLPPGWEKRTDSNGRVYFVNHNTRITQWEDPR 36
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
GWE R D+ GR Y+V+HNTR + WE P+
Sbjct: 9 GWEKRTDSNGRVYFVNHNTRITQWEDPR 36
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 19/26 (73%)
Query: 484 EEDADTYGRRYYVDHNTRSSSWERPQ 509
E+ D+ GR Y+V+HNTR + WE P+
Sbjct: 11 EKRTDSNGRVYFVNHNTRITQWEDPR 36
>pdb|1I5H|W Chain W, Solution Structure Of The Rnedd4 Wwiii Domain-Renac Bp2
Peptide Complex
Length = 50
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/44 (54%), Positives = 29/44 (65%)
Query: 590 EDDALGSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPRTQGQEI 633
+ + LG LP GWE R DGRV+F+NH + TQWEDPR Q I
Sbjct: 5 DSNDLGPLPPGWEERTHTDGRVFFINHNIKKTQWEDPRMQNVAI 48
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 639 DEPPLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
D PLPPGWE R DG +F++HN + T +EDPR
Sbjct: 8 DLGPLPPGWEERTHTDGRVFFINHNIKKTQWEDPR 42
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSERL 440
PLPPGWE R GRV++++HN + T W+ P + +
Sbjct: 11 PLPPGWEERTHTDGRVFFINHNIKKTQWEDPRMQNV 46
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSERL 545
PLPPGWE R GRV++++HN + T W+ P + +
Sbjct: 11 PLPPGWEERTHTDGRVFFINHNIKKTQWEDPRMQNV 46
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
GWE R T GR ++++HN + + WE P+
Sbjct: 15 GWEERTHTDGRVFFINHNIKKTQWEDPR 42
>pdb|2JOC|A Chain A, Mouse Itch 3rd Domain Phosphorylated In T30
Length = 37
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 23/36 (63%), Positives = 27/36 (75%)
Query: 593 ALGSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPRT 628
A+G LP GWE+R +GRVYFVNH R QWEDPR+
Sbjct: 2 AMGPLPPGWEKRTDSNGRVYFVNHNTRIXQWEDPRS 37
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNS 437
PLPPGWE R D GRVY+V+HNTR W+ P S
Sbjct: 5 PLPPGWEKRTDSNGRVYFVNHNTRIXQWEDPRS 37
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNS 542
PLPPGWE R D GRVY+V+HNTR W+ P S
Sbjct: 5 PLPPGWEKRTDSNGRVYFVNHNTRIXQWEDPRS 37
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 23/32 (71%)
Query: 642 PLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
PLPPGWE R +G YFV+HNTR +EDPR
Sbjct: 5 PLPPGWEKRTDSNGRVYFVNHNTRIXQWEDPR 36
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
GWE R D+ GR Y+V+HNTR WE P+
Sbjct: 9 GWEKRTDSNGRVYFVNHNTRIXQWEDPR 36
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 484 EEDADTYGRRYYVDHNTRSSSWERPQ 509
E+ D+ GR Y+V+HNTR WE P+
Sbjct: 11 EKRTDSNGRVYFVNHNTRIXQWEDPR 36
>pdb|2KYK|A Chain A, The Sandwich Region Between Two Lmp2a Py Motif Regulates
The Interaction Between Aip4ww2domain And Py Motif
Length = 39
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSE 438
PLPPGWE R D GR+YYVDH TR+TTWQRP E
Sbjct: 6 PLPPGWERRVDNMGRIYYVDHFTRTTTWQRPTLE 39
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/34 (73%), Positives = 27/34 (79%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSE 543
PLPPGWE R D GR+YYVDH TR+TTWQRP E
Sbjct: 6 PLPPGWERRVDNMGRIYYVDHFTRTTTWQRPTLE 39
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 25/34 (73%)
Query: 593 ALGSLPSGWERRVQPDGRVYFVNHKNRTTQWEDP 626
A+G LP GWERRV GR+Y+V+H RTT W+ P
Sbjct: 3 AMGPLPPGWERRVDNMGRIYYVDHFTRTTTWQRP 36
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERP 403
GWE R D GR YYVDH TR+++W+RP
Sbjct: 10 GWERRVDNMGRIYYVDHFTRTTTWQRP 36
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 22/31 (70%)
Query: 642 PLPPGWEIRYTEDGTRYFVDHNTRSTTFEDP 672
PLPPGWE R G Y+VDH TR+TT++ P
Sbjct: 6 PLPPGWERRVDNMGRIYYVDHFTRTTTWQRP 36
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 484 EEDADTYGRRYYVDHNTRSSSWERP 508
E D GR YYVDH TR+++W+RP
Sbjct: 12 ERRVDNMGRIYYVDHFTRTTTWQRP 36
>pdb|2L4J|A Chain A, Yap Ww2
Length = 46
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 28/37 (75%)
Query: 593 ALGSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPRTQ 629
A G LP GWE+ + P+G +Y++NHKN+TT W DPR +
Sbjct: 8 ASGPLPEGWEQAITPEGEIYYINHKNKTTSWLDPRLE 44
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSE 438
PLP GWE P G +YY++H ++T+W P E
Sbjct: 11 PLPEGWEQAITPEGEIYYINHKNKTTSWLDPRLE 44
Score = 38.9 bits (89), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSE 543
PLP GWE P G +YY++H ++T+W P E
Sbjct: 11 PLPEGWEQAITPEGEIYYINHKNKTTSWLDPRLE 44
Score = 36.2 bits (82), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 22/32 (68%)
Query: 642 PLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
PLP GWE T +G Y+++H ++T++ DPR
Sbjct: 11 PLPEGWEQAITPEGEIYYINHKNKTTSWLDPR 42
>pdb|2DJY|A Chain A, Solution Structure Of Smurf2 Ww3 Domain-Smad7 Py Peptide
Complex
Length = 42
Score = 52.8 bits (125), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/40 (62%), Positives = 28/40 (70%), Gaps = 2/40 (5%)
Query: 634 GQIGADEPPLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
G +G+ PLPPGWEIR T G YFVDHN R+T F DPR
Sbjct: 1 GPLGSG--PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPR 38
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 595 GSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
G LP GWE R GRVYFV+H NRTTQ+ DPR
Sbjct: 6 GPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPR 38
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
PLPPGWE+R GRVY+VDHN R+T + P
Sbjct: 7 PLPPGWEIRNTATGRVYFVDHNNRTTQFTDP 37
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
PLPPGWE+R GRVY+VDHN R+T + P
Sbjct: 7 PLPPGWEIRNTATGRVYFVDHNNRTTQFTDP 37
Score = 36.6 bits (83), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
GWEIR GR Y+VDHN R++ + P+
Sbjct: 11 GWEIRNTATGRVYFVDHNNRTTQFTDPR 38
>pdb|2LTZ|A Chain A, Smurf2 Ww3 Domain In Complex With A Smad7 Derived Peptide
Length = 37
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/32 (71%), Positives = 24/32 (75%)
Query: 642 PLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
PLPPGWEIR T G YFVDHN R+T F DPR
Sbjct: 2 PLPPGWEIRNTATGRVYFVDHNNRTTQFTDPR 33
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 24/33 (72%)
Query: 595 GSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
G LP GWE R GRVYFV+H NRTTQ+ DPR
Sbjct: 1 GPLPPGWEIRNTATGRVYFVDHNNRTTQFTDPR 33
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
PLPPGWE+R GRVY+VDHN R+T + P
Sbjct: 2 PLPPGWEIRNTATGRVYFVDHNNRTTQFTDP 32
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
PLPPGWE+R GRVY+VDHN R+T + P
Sbjct: 2 PLPPGWEIRNTATGRVYFVDHNNRTTQFTDP 32
Score = 36.2 bits (82), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 19/28 (67%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
GWEIR GR Y+VDHN R++ + P+
Sbjct: 6 GWEIRNTATGRVYFVDHNNRTTQFTDPR 33
>pdb|2LB1|A Chain A, Structure Of The Second Domain Of Human Smurf1 In Complex
With A Human Smad1 Derived Peptide
Length = 35
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 24/32 (75%)
Query: 642 PLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
PLPPGWE+R T G YFVDHN R+T F DPR
Sbjct: 3 PLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPR 34
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 25/34 (73%)
Query: 594 LGSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
LG LP GWE R GR+YFV+H NRTTQ+ DPR
Sbjct: 1 LGPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPR 34
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
PLPPGWE+R GR+Y+VDHN R+T + P
Sbjct: 3 PLPPGWEVRSTVSGRIYFVDHNNRTTQFTDP 33
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
PLPPGWE+R GR+Y+VDHN R+T + P
Sbjct: 3 PLPPGWEVRSTVSGRIYFVDHNNRTTQFTDP 33
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
GWE+R GR Y+VDHN R++ + P+
Sbjct: 7 GWEVRSTVSGRIYFVDHNNRTTQFTDPR 34
>pdb|2LTX|A Chain A, Smurf1 Ww2 Domain In Complex With A Smad7 Derived Peptide
Length = 35
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/32 (68%), Positives = 24/32 (75%)
Query: 642 PLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
PLPPGWE+R T G YFVDHN R+T F DPR
Sbjct: 2 PLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPR 33
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 595 GSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
G LP GWE R GR+YFV+H NRTTQ+ DPR
Sbjct: 1 GPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPR 33
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
PLPPGWE+R GR+Y+VDHN R+T + P
Sbjct: 2 PLPPGWEVRSTVSGRIYFVDHNNRTTQFTDP 32
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
PLPPGWE+R GR+Y+VDHN R+T + P
Sbjct: 2 PLPPGWEVRSTVSGRIYFVDHNNRTTQFTDP 32
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 19/28 (67%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
GWE+R GR Y+VDHN R++ + P+
Sbjct: 6 GWEVRSTVSGRIYFVDHNNRTTQFTDPR 33
>pdb|2LAW|A Chain A, Structure Of The Second Ww Domain From Human Yap In
Complex With A Human Smad1 Derived Peptide
Length = 38
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 595 GSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
G LP GWE+ + DG +Y++NHKN+TT W DPR
Sbjct: 5 GPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPR 37
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 26/37 (70%)
Query: 637 GADEPPLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
GA E PLP GWE T+DG Y+++H ++T++ DPR
Sbjct: 1 GAMEGPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPR 37
Score = 36.6 bits (83), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
PLP GWE G +YY++H ++T+W P
Sbjct: 6 PLPDGWEQAMTQDGEIYYINHKNKTTSWLDP 36
Score = 36.6 bits (83), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
PLP GWE G +YY++H ++T+W P
Sbjct: 6 PLPDGWEQAMTQDGEIYYINHKNKTTSWLDP 36
>pdb|2F21|A Chain A, Human Pin1 Fip Mutant
Length = 162
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 404 QPLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 453
+ LPPGWE R GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 5 EKLPPGWEKRMSADGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 54
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 509 QPLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 558
+ LPPGWE R GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 5 EKLPPGWEKRMSADGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 54
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 26/45 (57%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEP 641
LP GWE+R+ DGRVY+ NH +QWE P G+ G EP
Sbjct: 7 LPPGWEKRMSADGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 51
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 638 ADEPPLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPRPGVPKDQKGAYGVP 687
ADE LPPGWE R + DG Y+ +H T ++ +E P K G P
Sbjct: 2 ADEEKLPPGWEKRMSADGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 51
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 17/27 (62%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERP 403
GWE R GR YY +H T +S WERP
Sbjct: 10 GWEKRMSADGRVYYFNHITNASQWERP 36
>pdb|2LTV|A Chain A, Yap Ww2 In Complex With A Smad7 Derived Peptide
Length = 36
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 25/33 (75%)
Query: 595 GSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
G LP GWE+ + DG +Y++NHKN+TT W DPR
Sbjct: 1 GPLPDGWEQAMTQDGEIYYINHKNKTTSWLDPR 33
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%)
Query: 642 PLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
PLP GWE T+DG Y+++H ++T++ DPR
Sbjct: 2 PLPDGWEQAMTQDGEIYYINHKNKTTSWLDPR 33
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
PLP GWE G +YY++H ++T+W P
Sbjct: 2 PLPDGWEQAMTQDGEIYYINHKNKTTSWLDP 32
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
PLP GWE G +YY++H ++T+W P
Sbjct: 2 PLPDGWEQAMTQDGEIYYINHKNKTTSWLDP 32
>pdb|2YSF|A Chain A, Solution Structure Of The Fourth Ww Domain From The Human
E3 Ubiquitin-Protein Ligase Itchy Homolog, Itch
Length = 40
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 26/33 (78%)
Query: 643 LPPGWEIRYTEDGTRYFVDHNTRSTTFEDPRPG 675
LP GWE+R+T DG YFVDHN R+TT+ DPR G
Sbjct: 8 LPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRTG 40
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 21/33 (63%)
Query: 596 SLPSGWERRVQPDGRVYFVNHKNRTTQWEDPRT 628
LP GWE R DG YFV+H RTT + DPRT
Sbjct: 7 GLPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRT 39
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 406 LPPGWELRRDPRGRVYYVDHNTRSTTWQRPNS 437
LP GWE+R G Y+VDHN R+TT+ P +
Sbjct: 8 LPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRT 39
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%)
Query: 511 LPPGWELRRDPRGRVYYVDHNTRSTTWQRPNS 542
LP GWE+R G Y+VDHN R+TT+ P +
Sbjct: 8 LPEGWEMRFTVDGIPYFVDHNRRTTTYIDPRT 39
>pdb|2LB2|A Chain A, Structure Of The Second Domain Of Human Nedd4l In Complex
With A Phosphorylated Ptpy Motif Derived From Human
Smad3
Length = 35
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 406 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
LP GWE R+D +GR YYV+HN R+TTW RP
Sbjct: 2 LPSGWEERKDAKGRTYYVNHNNRTTTWTRP 31
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 511 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
LP GWE R+D +GR YYV+HN R+TTW RP
Sbjct: 2 LPSGWEERKDAKGRTYYVNHNNRTTTWTRP 31
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 21/34 (61%)
Query: 596 SLPSGWERRVQPDGRVYFVNHKNRTTQWEDPRTQ 629
LPSGWE R GR Y+VNH NRTT W P Q
Sbjct: 1 GLPSGWEERKDAKGRTYYVNHNNRTTTWTRPIMQ 34
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERP 403
GWE R+D GR YYV+HN R+++W RP
Sbjct: 5 GWEERKDAKGRTYYVNHNNRTTTWTRP 31
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 484 EEDADTYGRRYYVDHNTRSSSWERP 508
EE D GR YYV+HN R+++W RP
Sbjct: 7 EERKDAKGRTYYVNHNNRTTTWTRP 31
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 643 LPPGWEIRYTEDGTRYFVDHNTRSTTFEDP 672
LP GWE R G Y+V+HN R+TT+ P
Sbjct: 2 LPSGWEERKDAKGRTYYVNHNNRTTTWTRP 31
>pdb|1WR4|A Chain A, Solution Structure Of The Second Ww Domain Of Nedd4-2
Length = 36
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 406 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
LP GWE R+D +GR YYV+HN R+TTW RP
Sbjct: 5 LPSGWEERKDAKGRTYYVNHNNRTTTWTRP 34
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 511 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
LP GWE R+D +GR YYV+HN R+TTW RP
Sbjct: 5 LPSGWEERKDAKGRTYYVNHNNRTTTWTRP 34
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 20/31 (64%)
Query: 596 SLPSGWERRVQPDGRVYFVNHKNRTTQWEDP 626
LPSGWE R GR Y+VNH NRTT W P
Sbjct: 4 GLPSGWEERKDAKGRTYYVNHNNRTTTWTRP 34
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERP 403
GWE R+D GR YYV+HN R+++W RP
Sbjct: 8 GWEERKDAKGRTYYVNHNNRTTTWTRP 34
Score = 36.6 bits (83), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 20/33 (60%)
Query: 640 EPPLPPGWEIRYTEDGTRYFVDHNTRSTTFEDP 672
P LP GWE R G Y+V+HN R+TT+ P
Sbjct: 2 SPGLPSGWEERKDAKGRTYYVNHNNRTTTWTRP 34
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 484 EEDADTYGRRYYVDHNTRSSSWERP 508
EE D GR YYV+HN R+++W RP
Sbjct: 10 EERKDAKGRTYYVNHNNRTTTWTRP 34
>pdb|2YSD|A Chain A, Solution Structure Of The First Ww Domain From The Human
Membrane-Associated Guanylate Kinase, Ww And Pdz Domain-
Containing Protein 1. Magi-1
Length = 57
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%), Gaps = 2/42 (4%)
Query: 634 GQIGADE--PPLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
G GA++ PLP WE+ YTE+G YF+DHNT++T++ DPR
Sbjct: 4 GSSGAEDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPR 45
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 591 DDALGSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
+D LG LP WE +G VYF++H +TT W DPR
Sbjct: 9 EDNLGPLPENWEMAYTENGEVYFIDHNTKTTSWLDPR 45
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
PLP WE+ G VY++DHNT++T+W P
Sbjct: 14 PLPENWEMAYTENGEVYFIDHNTKTTSWLDP 44
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
PLP WE+ G VY++DHNT++T+W P
Sbjct: 14 PLPENWEMAYTENGEVYFIDHNTKTTSWLDP 44
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%)
Query: 378 WEIRQDTYGRRYYVDHNTRSSSWERPQPL 406
WE+ G Y++DHNT+++SW P+ L
Sbjct: 19 WEMAYTENGEVYFIDHNTKTTSWLDPRCL 47
>pdb|1WR7|A Chain A, Solution Structure Of The Third Ww Domain Of Nedd4-2
Length = 41
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDPRTQ 629
LP GWE R+ P+GR +F++H +TT WEDPR +
Sbjct: 9 LPPGWEMRIAPNGRPFFIDHNTKTTTWEDPRLK 41
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 643 LPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
LPPGWE+R +G +F+DHNT++TT+EDPR
Sbjct: 9 LPPGWEMRIAPNGRPFFIDHNTKTTTWEDPR 39
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 406 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
LPPGWE+R P GR +++DHNT++TTW+ P
Sbjct: 9 LPPGWEMRIAPNGRPFFIDHNTKTTTWEDP 38
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 511 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
LPPGWE+R P GR +++DHNT++TTW+ P
Sbjct: 9 LPPGWEMRIAPNGRPFFIDHNTKTTTWEDP 38
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 22/28 (78%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
GWE+R GR +++DHNT++++WE P+
Sbjct: 12 GWEMRIAPNGRPFFIDHNTKTTTWEDPR 39
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 17/19 (89%)
Query: 491 GRRYYVDHNTRSSSWERPQ 509
GR +++DHNT++++WE P+
Sbjct: 21 GRPFFIDHNTKTTTWEDPR 39
>pdb|2LTY|A Chain A, Nedd4l Ww2 Domain In Complex With A Smad7 Derived Peptide
Length = 34
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 406 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
LP GWE R+D +GR YYV+HN R+TTW RP
Sbjct: 3 LPSGWEERKDAKGRTYYVNHNNRTTTWTRP 32
Score = 49.7 bits (117), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 24/30 (80%)
Query: 511 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
LP GWE R+D +GR YYV+HN R+TTW RP
Sbjct: 3 LPSGWEERKDAKGRTYYVNHNNRTTTWTRP 32
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 20/31 (64%)
Query: 596 SLPSGWERRVQPDGRVYFVNHKNRTTQWEDP 626
LPSGWE R GR Y+VNH NRTT W P
Sbjct: 2 GLPSGWEERKDAKGRTYYVNHNNRTTTWTRP 32
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 21/27 (77%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERP 403
GWE R+D GR YYV+HN R+++W RP
Sbjct: 6 GWEERKDAKGRTYYVNHNNRTTTWTRP 32
Score = 36.2 bits (82), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 641 PPLPPGWEIRYTEDGTRYFVDHNTRSTTFEDP 672
P LP GWE R G Y+V+HN R+TT+ P
Sbjct: 1 PGLPSGWEERKDAKGRTYYVNHNNRTTTWTRP 32
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 484 EEDADTYGRRYYVDHNTRSSSWERP 508
EE D GR YYV+HN R+++W RP
Sbjct: 8 EERKDAKGRTYYVNHNNRTTTWTRP 32
>pdb|2KPZ|A Chain A, Human Nedd4 3rd Ww Domain Complex With The Human T-Cell
Leukemia Virus 1 Gag-Pro Poliprotein Derived Peptide
Sdpqipppyvep
pdb|2KQ0|A Chain A, Human Nedd4 3rd Ww Domain Complex With Ebola Zaire Virus
Matrix Protein Vp40 Derived Peptide Ilptappeymea
Length = 49
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 28/35 (80%)
Query: 643 LPPGWEIRYTEDGTRYFVDHNTRSTTFEDPRPGVP 677
LP GWE+R+ +G +F+DHNT++TT+EDPR +P
Sbjct: 13 LPKGWEVRHAPNGRPFFIDHNTKTTTWEDPRLKIP 47
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 595 GSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPRTQ 629
G LP GWE R P+GR +F++H +TT WEDPR +
Sbjct: 11 GFLPKGWEVRHAPNGRPFFIDHNTKTTTWEDPRLK 45
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 406 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
LP GWE+R P GR +++DHNT++TTW+ P
Sbjct: 13 LPKGWEVRHAPNGRPFFIDHNTKTTTWEDP 42
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 511 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
LP GWE+R P GR +++DHNT++TTW+ P
Sbjct: 13 LPKGWEVRHAPNGRPFFIDHNTKTTTWEDP 42
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 22/28 (78%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
GWE+R GR +++DHNT++++WE P+
Sbjct: 16 GWEVRHAPNGRPFFIDHNTKTTTWEDPR 43
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 9/19 (47%), Positives = 17/19 (89%)
Query: 491 GRRYYVDHNTRSSSWERPQ 509
GR +++DHNT++++WE P+
Sbjct: 25 GRPFFIDHNTKTTTWEDPR 43
>pdb|1WR3|A Chain A, Solution Structure Of The First Ww Domain Of Nedd4-2
Length = 36
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 23/31 (74%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
PLPPGWE + D GR YYV+HN RST W RP
Sbjct: 4 PLPPGWEEKVDNLGRTYYVNHNNRSTQWHRP 34
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 23/31 (74%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
PLPPGWE + D GR YYV+HN RST W RP
Sbjct: 4 PLPPGWEEKVDNLGRTYYVNHNNRSTQWHRP 34
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDP 626
LP GWE +V GR Y+VNH NR+TQW P
Sbjct: 5 LPPGWEEKVDNLGRTYYVNHNNRSTQWHRP 34
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
GWE + D GR YYV+HN RS+ W RP
Sbjct: 8 GWEEKVDNLGRTYYVNHNNRSTQWHRPS 35
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/33 (51%), Positives = 21/33 (63%)
Query: 640 EPPLPPGWEIRYTEDGTRYFVDHNTRSTTFEDP 672
PPLPPGWE + G Y+V+HN RST + P
Sbjct: 2 SPPLPPGWEEKVDNLGRTYYVNHNNRSTQWHRP 34
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 17/26 (65%)
Query: 484 EEDADTYGRRYYVDHNTRSSSWERPQ 509
EE D GR YYV+HN RS+ W RP
Sbjct: 10 EEKVDNLGRTYYVNHNNRSTQWHRPS 35
>pdb|2DMV|A Chain A, Solution Structure Of The Second Ww Domain Of Itchy
Homolog E3 Ubiquitin Protein Ligase (Itch)
Length = 43
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 23/31 (74%)
Query: 406 LPPGWELRRDPRGRVYYVDHNTRSTTWQRPN 436
LPPGWE R D GRVYYVDH + TTW RP+
Sbjct: 8 LPPGWEQRVDQHGRVYYVDHVEKRTTWDRPS 38
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 23/31 (74%)
Query: 511 LPPGWELRRDPRGRVYYVDHNTRSTTWQRPN 541
LPPGWE R D GRVYYVDH + TTW RP+
Sbjct: 8 LPPGWEQRVDQHGRVYYVDHVEKRTTWDRPS 38
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDP 626
LP GWE+RV GRVY+V+H + T W+ P
Sbjct: 8 LPPGWEQRVDQHGRVYYVDHVEKRTTWDRP 37
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERP 403
GWE R D +GR YYVDH + ++W+RP
Sbjct: 11 GWEQRVDQHGRVYYVDHVEKRTTWDRP 37
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 643 LPPGWEIRYTEDGTRYFVDHNTRSTTFEDP 672
LPPGWE R + G Y+VDH + TT++ P
Sbjct: 8 LPPGWEQRVDQHGRVYYVDHVEKRTTWDRP 37
Score = 31.2 bits (69), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 18/25 (72%)
Query: 484 EEDADTYGRRYYVDHNTRSSSWERP 508
E+ D +GR YYVDH + ++W+RP
Sbjct: 13 EQRVDQHGRVYYVDHVEKRTTWDRP 37
>pdb|2LAJ|A Chain A, Third Ww Domain Of Human Nedd4l In Complex With Doubly
Phosphorylated Human Smad3 Derived Peptide
Length = 44
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 24/33 (72%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDPRTQ 629
LP GWE R+ P+GR +F +H +TT WEDPR +
Sbjct: 8 LPPGWEMRIAPNGRPFFYDHNTKTTTWEDPRLK 40
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 406 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
LPPGWE+R P GR ++ DHNT++TTW+ P
Sbjct: 8 LPPGWEMRIAPNGRPFFYDHNTKTTTWEDP 37
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 511 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
LPPGWE+R P GR ++ DHNT++TTW+ P
Sbjct: 8 LPPGWEMRIAPNGRPFFYDHNTKTTTWEDP 37
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 26/35 (74%)
Query: 643 LPPGWEIRYTEDGTRYFVDHNTRSTTFEDPRPGVP 677
LPPGWE+R +G +F DHNT++TT+EDPR P
Sbjct: 8 LPPGWEMRIAPNGRPFFYDHNTKTTTWEDPRLKFP 42
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
GWE+R GR ++ DHNT++++WE P+
Sbjct: 11 GWEMRIAPNGRPFFYDHNTKTTTWEDPR 38
>pdb|1ZCN|A Chain A, Human Pin1 Ng Mutant
Length = 161
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 404 QPLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 453
+ LPPGWE +R GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 5 EKLPPGWE-KRMSNGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 53
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 509 QPLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 558
+ LPPGWE +R GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 5 EKLPPGWE-KRMSNGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 53
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEP 641
LP GWE+R+ +GRVY+ NH +QWE P G+ G EP
Sbjct: 7 LPPGWEKRMS-NGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 50
Score = 37.0 bits (84), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 638 ADEPPLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPRPGVPKDQKGAYGVP 687
ADE LPPGWE R + +G Y+ +H T ++ +E P K G P
Sbjct: 2 ADEEKLPPGWEKRMS-NGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 50
Score = 32.3 bits (72), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERP 403
GWE R + GR YY +H T +S WERP
Sbjct: 10 GWEKRM-SNGRVYYFNHITNASQWERP 35
>pdb|3L4H|A Chain A, Helical Box Domain And Second Ww Domain Of The Human E3
Ubiq Protein Ligase Hecw1
Length = 109
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 643 LPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
LP GWEI+ + G +FVDHN+R+TTF DPR
Sbjct: 73 LPRGWEIKTDQQGKSFFVDHNSRATTFIDPR 103
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 406 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
LP GWE++ D +G+ ++VDHN+R+TT+ P
Sbjct: 73 LPRGWEIKTDQQGKSFFVDHNSRATTFIDP 102
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 511 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
LP GWE++ D +G+ ++VDHN+R+TT+ P
Sbjct: 73 LPRGWEIKTDQQGKSFFVDHNSRATTFIDP 102
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 25/34 (73%), Gaps = 1/34 (2%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ-PLPPG 409
GWEI+ D G+ ++VDHN+R++++ P+ PL G
Sbjct: 76 GWEIKTDQQGKSFFVDHNSRATTFIDPRIPLQNG 109
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 592 DALGSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPRTQGQ 631
D LP GWE + G+ +FV+H +R T + DPR Q
Sbjct: 68 DTRLELPRGWEIKTDQQGKSFFVDHNSRATTFIDPRIPLQ 107
>pdb|1O6W|A Chain A, Solution Structure Of The Prp40 Ww Domain Pair Of The
Yeast Splicing Factor Prp40
Length = 75
Score = 47.4 bits (111), Expect = 4e-05, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 9/71 (12%)
Query: 378 WEIRQDTYGRRYYVDHNTRSSSWERPQPL---------PPGWELRRDPRGRVYYVDHNTR 428
W+ +D GR YY + T+ S+WE+P+ L GW+ + G+VYY + TR
Sbjct: 4 WKEAKDASGRIYYYNTLTKKSTWEKPKELISQEELLLRENGWKAAKTADGKVYYYNPTTR 63
Query: 429 STTWQRPNSER 439
T+W P E+
Sbjct: 64 ETSWTIPAFEK 74
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 9/70 (12%)
Query: 484 EEDADTYGRRYYVDHNTRSSSWERPQPL---------PPGWELRRDPRGRVYYVDHNTRS 534
+E D GR YY + T+ S+WE+P+ L GW+ + G+VYY + TR
Sbjct: 5 KEAKDASGRIYYYNTLTKKSTWEKPKELISQEELLLRENGWKAAKTADGKVYYYNPTTRE 64
Query: 535 TTWQRPNSER 544
T+W P E+
Sbjct: 65 TSWTIPAFEK 74
Score = 34.3 bits (77), Expect = 0.32, Method: Composition-based stats.
Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 7/75 (9%)
Query: 599 SGWERRVQPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEPPL-PPGWEIRYTEDGTR 657
S W+ GR+Y+ N + + WE P+ I +E L GW+ T DG
Sbjct: 2 SIWKEAKDASGRIYYYNTLTKKSTWEKPKE------LISQEELLLRENGWKAAKTADGKV 55
Query: 658 YFVDHNTRSTTFEDP 672
Y+ + TR T++ P
Sbjct: 56 YYYNPTTRETSWTIP 70
Score = 31.2 bits (69), Expect = 3.4, Method: Composition-based stats.
Identities = 24/112 (21%), Positives = 39/112 (34%), Gaps = 45/112 (40%)
Query: 515 WELRRDPRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHVVSQGSQRFLYPQHXXX 574
W+ +D GR+YY + T+ +TW++P ++SQ
Sbjct: 4 WKEAKDASGRIYYYNTLTKKSTWEKPK---------------ELISQ------------- 35
Query: 575 XXXXXXXXXXXXXTEEDDALGSLPSGWERRVQPDGRVYFVNHKNRTTQWEDP 626
+ L +GW+ DG+VY+ N R T W P
Sbjct: 36 -----------------EELLLRENGWKAAKTADGKVYYYNPTTRETSWTIP 70
>pdb|2ZQV|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl
Cis-Trans Isomerase
Length = 163
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 404 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 453
+ LPPGWE R GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 5 EKLPPGWEKRMSRSSGRVYYANHITNASQWERPSGNSSSGGKNGQGEPARV 55
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 509 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 558
+ LPPGWE R GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 5 EKLPPGWEKRMSRSSGRVYYANHITNASQWERPSGNSSSGGKNGQGEPARV 55
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 597 LPSGWERRV-QPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEP 641
LP GWE+R+ + GRVY+ NH +QWE P G+ G EP
Sbjct: 7 LPPGWEKRMSRSSGRVYYANHITNASQWERPSGNSSSGGKNGQGEP 52
Score = 37.4 bits (85), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 638 ADEPPLPPGWEIRYTEDGTR-YFVDHNTRSTTFEDPRPGVPKDQKGAYGVP 687
ADE LPPGWE R + R Y+ +H T ++ +E P K G P
Sbjct: 2 ADEEKLPPGWEKRMSRSSGRVYYANHITNASQWERPSGNSSSGGKNGQGEP 52
Score = 32.7 bits (73), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 377 GWEIRQD-TYGRRYYVDHNTRSSSWERP 403
GWE R + GR YY +H T +S WERP
Sbjct: 10 GWEKRMSRSSGRVYYANHITNASQWERP 37
>pdb|2ZR5|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl
Cis-Trans Isomerase
Length = 163
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 404 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 453
+ LPPGWE R GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 5 EKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 55
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 509 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 558
+ LPPGWE R GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 5 EKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 55
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 597 LPSGWERRV-QPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEP 641
LP GWE+R+ + GRVY+ NH +QWE P G+ G EP
Sbjct: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 52
Score = 36.6 bits (83), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 638 ADEPPLPPGWEIRYTEDGTR-YFVDHNTRSTTFEDPRPGVPKDQKGAYGVP 687
ADE LPPGWE R + R Y+ +H T ++ +E P K G P
Sbjct: 2 ADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 52
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 377 GWEIRQD-TYGRRYYVDHNTRSSSWERP 403
GWE R + GR YY +H T +S WERP
Sbjct: 10 GWEKRMSRSSGRVYYFNHITNASQWERP 37
>pdb|2ZQS|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl
Cis-Trans Isomerase
Length = 163
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 404 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 453
+ LPPGWE R GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 5 EKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 55
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 509 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 558
+ LPPGWE R GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 5 EKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 55
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 597 LPSGWERRV-QPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEP 641
LP GWE+R+ + GRVY+ NH +QWE P G+ G EP
Sbjct: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 52
Score = 36.6 bits (83), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 638 ADEPPLPPGWEIRYTEDGTR-YFVDHNTRSTTFEDPRPGVPKDQKGAYGVP 687
ADE LPPGWE R + R Y+ +H T ++ +E P K G P
Sbjct: 2 ADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 52
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 377 GWEIRQD-TYGRRYYVDHNTRSSSWERP 403
GWE R + GR YY +H T +S WERP
Sbjct: 10 GWEKRMSRSSGRVYYFNHITNASQWERP 37
>pdb|2ZQT|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl
Cis-Trans Isomerase
Length = 163
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 404 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 453
+ LPPGWE R GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 5 EKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 55
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 509 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 558
+ LPPGWE R GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 5 EKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 55
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 597 LPSGWERRV-QPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEP 641
LP GWE+R+ + GRVY+ NH +QWE P G+ G EP
Sbjct: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 52
Score = 36.6 bits (83), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 638 ADEPPLPPGWEIRYTEDGTR-YFVDHNTRSTTFEDPRPGVPKDQKGAYGVP 687
ADE LPPGWE R + R Y+ +H T ++ +E P K G P
Sbjct: 2 ADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 52
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 377 GWEIRQD-TYGRRYYVDHNTRSSSWERP 403
GWE R + GR YY +H T +S WERP
Sbjct: 10 GWEKRMSRSSGRVYYFNHITNASQWERP 37
>pdb|1F8A|B Chain B, Structural Basis For The Phosphoserine-Proline Recognition
By Group Iv Ww Domains
Length = 167
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 404 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 453
+ LPPGWE R GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 9 EKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 59
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 509 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 558
+ LPPGWE R GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 9 EKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 59
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 597 LPSGWERRV-QPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEP 641
LP GWE+R+ + GRVY+ NH +QWE P G+ G EP
Sbjct: 11 LPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 56
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 638 ADEPPLPPGWEIRYTEDGTR-YFVDHNTRSTTFEDPRPGVPKDQKGAYGVP 687
ADE LPPGWE R + R Y+ +H T ++ +E P K G P
Sbjct: 6 ADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 56
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 377 GWEIRQD-TYGRRYYVDHNTRSSSWERP 403
GWE R + GR YY +H T +S WERP
Sbjct: 14 GWEKRMSRSSGRVYYFNHITNASQWERP 41
>pdb|1PIN|A Chain A, Pin1 Peptidyl-Prolyl Cis-Trans Isomerase From Homo Sapiens
pdb|1NMV|A Chain A, Solution Structure Of Human Pin1
Length = 163
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 404 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 453
+ LPPGWE R GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 5 EKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 55
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 509 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 558
+ LPPGWE R GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 5 EKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 55
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 597 LPSGWERRV-QPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEP 641
LP GWE+R+ + GRVY+ NH +QWE P G+ G EP
Sbjct: 7 LPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 52
Score = 36.6 bits (83), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 638 ADEPPLPPGWEIRYTEDGTR-YFVDHNTRSTTFEDPRPGVPKDQKGAYGVP 687
ADE LPPGWE R + R Y+ +H T ++ +E P K G P
Sbjct: 2 ADEEKLPPGWEKRMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 52
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 377 GWEIRQD-TYGRRYYVDHNTRSSSWERP 403
GWE R + GR YY +H T +S WERP
Sbjct: 10 GWEKRMSRSSGRVYYFNHITNASQWERP 37
>pdb|1YMZ|A Chain A, Cc45, An Artificial Ww Domain Designed Using Statistical
Coupling Analysis
Length = 43
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 402 RPQPLPPGWELRRDPRGRVYYVDHNTRSTTWQRPN 436
R PLPPGWE R D G+VYY + T +TTW+RP
Sbjct: 5 RSMPLPPGWERRTDVEGKVYYFNVRTLTTTWERPT 39
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 24/35 (68%)
Query: 507 RPQPLPPGWELRRDPRGRVYYVDHNTRSTTWQRPN 541
R PLPPGWE R D G+VYY + T +TTW+RP
Sbjct: 5 RSMPLPPGWERRTDVEGKVYYFNVRTLTTTWERPT 39
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDP 626
LP GWERR +G+VY+ N + TT WE P
Sbjct: 9 LPPGWERRTDVEGKVYYFNVRTLTTTWERP 38
Score = 33.1 bits (74), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%)
Query: 642 PLPPGWEIRYTEDGTRYFVDHNTRSTTFEDP 672
PLPPGWE R +G Y+ + T +TT+E P
Sbjct: 8 PLPPGWERRTDVEGKVYYFNVRTLTTTWERP 38
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERP 403
GWE R D G+ YY + T +++WERP
Sbjct: 12 GWERRTDVEGKVYYFNVRTLTTTWERP 38
>pdb|2ZR4|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl
Cis-Trans Isomerase
Length = 163
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 404 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 453
+ LPPGWE R GRVYY +H T + W+RP+ K+ QGE A V
Sbjct: 5 EKLPPGWEKRMSRSSGRVYYFNHITNAAQWERPSGNSSSGGKNGQGEPARV 55
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 509 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 558
+ LPPGWE R GRVYY +H T + W+RP+ K+ QGE A V
Sbjct: 5 EKLPPGWEKRMSRSSGRVYYFNHITNAAQWERPSGNSSSGGKNGQGEPARV 55
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 597 LPSGWERRV-QPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEP 641
LP GWE+R+ + GRVY+ NH QWE P G+ G EP
Sbjct: 7 LPPGWEKRMSRSSGRVYYFNHITNAAQWERPSGNSSSGGKNGQGEP 52
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 638 ADEPPLPPGWEIRYTEDGTR-YFVDHNTRSTTFEDPRPGVPKDQKGAYGVP 687
ADE LPPGWE R + R Y+ +H T + +E P K G P
Sbjct: 2 ADEEKLPPGWEKRMSRSSGRVYYFNHITNAAQWERPSGNSSSGGKNGQGEP 52
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 377 GWEIRQD-TYGRRYYVDHNTRSSSWERP 403
GWE R + GR YY +H T ++ WERP
Sbjct: 10 GWEKRMSRSSGRVYYFNHITNAAQWERP 37
>pdb|3KAD|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1
Inhibitors
pdb|3KAF|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1
Inhibitors
pdb|2XP6|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors
By Structure-Guided Fragment Evolution
Length = 167
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 404 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 453
+ LPPGWE GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 9 EKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 59
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 509 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 558
+ LPPGWE GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 9 EKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 59
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 597 LPSGWERRV-QPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEP 641
LP GWE+ + + GRVY+ NH +QWE P G+ G EP
Sbjct: 11 LPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 56
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 638 ADEPPLPPGWEIRYTEDGTR-YFVDHNTRSTTFEDPRPGVPKDQKGAYGVP 687
ADE LPPGWE + R Y+ +H T ++ +E P K G P
Sbjct: 6 ADEEKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 56
Score = 30.0 bits (66), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 377 GWEIRQD-TYGRRYYVDHNTRSSSWERP 403
GWE + GR YY +H T +S WERP
Sbjct: 14 GWEKAMSRSSGRVYYFNHITNASQWERP 41
>pdb|2YSB|A Chain A, Solution Structure Of The First Ww Domain From The Mouse
Salvador Homolog 1 Protein (Sav1)
Length = 49
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
PLPPGW + RGR YY+DHNT +T W P
Sbjct: 11 PLPPGWSVDWTMRGRKYYIDHNTNTTHWSHP 41
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
PLPPGW + RGR YY+DHNT +T W P
Sbjct: 11 PLPPGWSVDWTMRGRKYYIDHNTNTTHWSHP 41
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 22/31 (70%)
Query: 642 PLPPGWEIRYTEDGTRYFVDHNTRSTTFEDP 672
PLPPGW + +T G +Y++DHNT +T + P
Sbjct: 11 PLPPGWSVDWTMRGRKYYIDHNTNTTHWSHP 41
Score = 34.7 bits (78), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERP 403
GW + GR+YY+DHNT ++ W P
Sbjct: 15 GWSVDWTMRGRKYYIDHNTNTTHWSHP 41
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 17/38 (44%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDPRTQGQEIG 634
LP GW GR Y+++H TT W P G G
Sbjct: 12 LPPGWSVDWTMRGRKYYIDHNTNTTHWSHPLESGPSSG 49
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 10/18 (55%), Positives = 14/18 (77%)
Query: 491 GRRYYVDHNTRSSSWERP 508
GR+YY+DHNT ++ W P
Sbjct: 24 GRKYYIDHNTNTTHWSHP 41
>pdb|1K9Q|A Chain A, Yap65 Ww Domain Complexed To N-(N-Octyl)-Gpppy-Nh2
pdb|1K9R|A Chain A, Yap65 Ww Domain Complexed To Acetyl-Plppy
Length = 40
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 639 DEPPLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
D+ PLP GWE+ T G RYF++H ++TT++DPR
Sbjct: 5 DDVPLPAGWEMAKTSSGQRYFLNHIDQTTTWQDPR 39
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
LP+GWE G+ YF+NH ++TT W+DPR
Sbjct: 9 LPAGWEMAKTSSGQRYFLNHIDQTTTWQDPR 39
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
PLP GWE+ + G+ Y+++H ++TTWQ P
Sbjct: 8 PLPAGWEMAKTSSGQRYFLNHIDQTTTWQDP 38
Score = 37.7 bits (86), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
PLP GWE+ + G+ Y+++H ++TTWQ P
Sbjct: 8 PLPAGWEMAKTSSGQRYFLNHIDQTTTWQDP 38
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 22/28 (78%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
GWE+ + + G+RY+++H ++++W+ P+
Sbjct: 12 GWEMAKTSSGQRYFLNHIDQTTTWQDPR 39
>pdb|2ITK|A Chain A, Human Pin1 Bound To D-Peptide
pdb|2Q5A|A Chain A, Human Pin1 Bound To L-Peptide
pdb|3KAB|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1
Inhibitors
pdb|3KAG|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1
Inhibitors
pdb|3KAH|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1
Inhibitors
pdb|3KAI|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1
Inhibitors
pdb|3KCE|A Chain A, Structure-Guided Design Of Alpha-Amino Acid-Derived Pin1
Inhibitors
pdb|3ODK|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors
By Structure-Guided Fragment Evolution
pdb|2XP3|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors
By Structure-Guided Fragment Evolution
pdb|2XP4|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors
By Structure-Guided Fragment Evolution
pdb|2XP5|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors
By Structure-Guided Fragment Evolution
pdb|2XP7|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors
By Structure-Guided Fragment Evolution
pdb|2XP8|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors
By Structure-Guided Fragment Evolution
pdb|2XP9|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors
By Structure-Guided Fragment Evolution
pdb|2XPA|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors
By Structure-Guided Fragment Evolution
pdb|2XPB|A Chain A, Discovery Of Cell-Active Phenyl-Imidazole Pin1 Inhibitors
By Structure-Guided Fragment Evolution
pdb|3NTP|A Chain A, Human Pin1 Complexed With Reduced Amide Inhibitor
Length = 167
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 404 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 453
+ LPPGWE GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 9 EKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 59
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 509 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 558
+ LPPGWE GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 9 EKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 59
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 597 LPSGWERRV-QPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEP 641
LP GWE+ + + GRVY+ NH +QWE P G+ G EP
Sbjct: 11 LPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 56
Score = 34.3 bits (77), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 638 ADEPPLPPGWEIRYTEDGTR-YFVDHNTRSTTFEDPRPGVPKDQKGAYGVP 687
ADE LPPGWE + R Y+ +H T ++ +E P K G P
Sbjct: 6 ADEEKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 56
Score = 30.0 bits (66), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 377 GWEIRQD-TYGRRYYVDHNTRSSSWERP 403
GWE + GR YY +H T +S WERP
Sbjct: 14 GWEKAMSRSSGRVYYFNHITNASQWERP 41
>pdb|2ZR6|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl
Cis-Trans Isomerase
pdb|3OOB|A Chain A, Structural And Functional Insights Of Directly Targeting
Pin1 By Epigallocatechin-3-Gallate
Length = 163
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 404 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 453
+ LPPGWE GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 5 EKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 55
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 509 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 558
+ LPPGWE GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 5 EKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 55
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 597 LPSGWERRV-QPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEP 641
LP GWE+ + + GRVY+ NH +QWE P G+ G EP
Sbjct: 7 LPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 52
Score = 33.9 bits (76), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 638 ADEPPLPPGWEIRYTEDGTR-YFVDHNTRSTTFEDPRPGVPKDQKGAYGVP 687
ADE LPPGWE + R Y+ +H T ++ +E P K G P
Sbjct: 2 ADEEKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 52
Score = 30.0 bits (66), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 377 GWEIRQD-TYGRRYYVDHNTRSSSWERP 403
GWE + GR YY +H T +S WERP
Sbjct: 10 GWEKAMSRSSGRVYYFNHITNASQWERP 37
>pdb|3TC5|A Chain A, Selective Targeting Of Disease-Relevant Protein Binding
Domains By O- Phosphorylated Natural Product Derivatives
Length = 166
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 404 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 453
+ LPPGWE GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 8 EKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 58
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 509 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 558
+ LPPGWE GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 8 EKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 58
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 597 LPSGWERRV-QPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEP 641
LP GWE+ + + GRVY+ NH +QWE P G+ G EP
Sbjct: 10 LPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 55
Score = 34.3 bits (77), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 638 ADEPPLPPGWEIRYTEDGTR-YFVDHNTRSTTFEDPRPGVPKDQKGAYGVP 687
ADE LPPGWE + R Y+ +H T ++ +E P K G P
Sbjct: 5 ADEEKLPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 55
Score = 30.0 bits (66), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 377 GWEIRQD-TYGRRYYVDHNTRSSSWERP 403
GWE + GR YY +H T +S WERP
Sbjct: 13 GWEKAMSRSSGRVYYFNHITNASQWERP 40
>pdb|1JMQ|A Chain A, Yap65 (L30k Mutant) Ww Domain In Complex With Gtppppytvg
Peptide
Length = 46
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 639 DEPPLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPRPGV 676
D+ PLP GWE+ T G RYF +H ++TT++DPR +
Sbjct: 5 DDVPLPAGWEMAKTSSGQRYFKNHIDQTTTWQDPRKAM 42
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
LP+GWE G+ YF NH ++TT W+DPR
Sbjct: 9 LPAGWEMAKTSSGQRYFKNHIDQTTTWQDPR 39
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSERLQHF 443
PLP GWE+ + G+ Y+ +H ++TTWQ P L
Sbjct: 8 PLPAGWEMAKTSSGQRYFKNHIDQTTTWQDPRKAMLSQM 46
Score = 38.5 bits (88), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSERLQHF 548
PLP GWE+ + G+ Y+ +H ++TTWQ P L
Sbjct: 8 PLPAGWEMAKTSSGQRYFKNHIDQTTTWQDPRKAMLSQM 46
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 9/27 (33%), Positives = 20/27 (74%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERP 403
GWE+ + + G+RY+ +H ++++W+ P
Sbjct: 12 GWEMAKTSSGQRYFKNHIDQTTTWQDP 38
>pdb|3TCZ|A Chain A, Human Pin1 Bound To Cis Peptidomimetic Inhibitor
pdb|3TDB|A Chain A, Human Pin1 Bound To Trans Peptidomimetic Inhibitor
Length = 158
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 406 LPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 453
LPPGWE GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 2 LPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 50
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 511 LPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 558
LPPGWE GRVYY +H T ++ W+RP+ K+ QGE A V
Sbjct: 2 LPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEPARV 50
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 597 LPSGWERRV-QPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEP 641
LP GWE+ + + GRVY+ NH +QWE P G+ G EP
Sbjct: 2 LPPGWEKAMSRSSGRVYYFNHITNASQWERPSGNSSSGGKNGQGEP 47
Score = 30.0 bits (66), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 377 GWEIRQD-TYGRRYYVDHNTRSSSWERP 403
GWE + GR YY +H T +S WERP
Sbjct: 5 GWEKAMSRSSGRVYYFNHITNASQWERP 32
>pdb|1K5R|A Chain A, Yap65 Ww Domain S24-Amino-Ethylsulfanyl-Acetic Acid Mutant
Length = 41
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 26/35 (74%)
Query: 639 DEPPLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
D+ PLP GWE+ T G RYF++H ++TT++DPR
Sbjct: 5 DDVPLPAGWEMAKTSXGQRYFLNHIDQTTTWQDPR 39
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
LP+GWE G+ YF+NH ++TT W+DPR
Sbjct: 9 LPAGWEMAKTSXGQRYFLNHIDQTTTWQDPR 39
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
PLP GWE+ + G+ Y+++H ++TTWQ P
Sbjct: 8 PLPAGWEMAKTSXGQRYFLNHIDQTTTWQDP 38
Score = 37.7 bits (86), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
PLP GWE+ + G+ Y+++H ++TTWQ P
Sbjct: 8 PLPAGWEMAKTSXGQRYFLNHIDQTTTWQDP 38
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 22/28 (78%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
GWE+ + + G+RY+++H ++++W+ P+
Sbjct: 12 GWEMAKTSXGQRYFLNHIDQTTTWQDPR 39
>pdb|2LAX|A Chain A, Structure Of First Ww Domain Of Human Yap In Complex With
A Human Smad1 Doubly-Phosphorilated Derived Peptide
Length = 40
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 642 PLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
PLP GWE+ T G RYF++H ++TT++DPR
Sbjct: 7 PLPAGWEMAKTSSGQRYFLNHIDQTTTWQDPR 38
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
LP+GWE G+ YF+NH ++TT W+DPR
Sbjct: 8 LPAGWEMAKTSSGQRYFLNHIDQTTTWQDPR 38
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
PLP GWE+ + G+ Y+++H ++TTWQ P
Sbjct: 7 PLPAGWEMAKTSSGQRYFLNHIDQTTTWQDP 37
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
PLP GWE+ + G+ Y+++H ++TTWQ P
Sbjct: 7 PLPAGWEMAKTSSGQRYFLNHIDQTTTWQDP 37
Score = 31.6 bits (70), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 22/28 (78%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
GWE+ + + G+RY+++H ++++W+ P+
Sbjct: 11 GWEMAKTSSGQRYFLNHIDQTTTWQDPR 38
>pdb|2LAY|A Chain A, Structure Of The First Ww Domain Of Human Yap In Complex
With A Phosphorylated Human Smad1 Derived Peptide
pdb|2LTW|A Chain A, Yap Ww1 In Complex With A Smad7 Derived Peptide
Length = 36
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 24/32 (75%)
Query: 642 PLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
PLP GWE+ T G RYF++H ++TT++DPR
Sbjct: 3 PLPAGWEMAKTSSGQRYFLNHIDQTTTWQDPR 34
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
LP+GWE G+ YF+NH ++TT W+DPR
Sbjct: 4 LPAGWEMAKTSSGQRYFLNHIDQTTTWQDPR 34
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
PLP GWE+ + G+ Y+++H ++TTWQ P
Sbjct: 3 PLPAGWEMAKTSSGQRYFLNHIDQTTTWQDP 33
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 22/31 (70%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
PLP GWE+ + G+ Y+++H ++TTWQ P
Sbjct: 3 PLPAGWEMAKTSSGQRYFLNHIDQTTTWQDP 33
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 9/28 (32%), Positives = 22/28 (78%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
GWE+ + + G+RY+++H ++++W+ P+
Sbjct: 7 GWEMAKTSSGQRYFLNHIDQTTTWQDPR 34
>pdb|2ZQU|A Chain A, Crystal Structure Of A Mutant Pin1 Peptidyl-Prolyl
Cis-Trans Isomerase
Length = 163
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 404 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 453
+ LPPGWE R GRVYY +H T ++ +RP+ K+ QGE A V
Sbjct: 5 EKLPPGWEKRMSRSSGRVYYFNHITNASQAERPSGNSSSGGKNGQGEPARV 55
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 509 QPLPPGWELRRD-PRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHV 558
+ LPPGWE R GRVYY +H T ++ +RP+ K+ QGE A V
Sbjct: 5 EKLPPGWEKRMSRSSGRVYYFNHITNASQAERPSGNSSSGGKNGQGEPARV 55
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 597 LPSGWERRV-QPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEP 641
LP GWE+R+ + GRVY+ NH +Q E P G+ G EP
Sbjct: 7 LPPGWEKRMSRSSGRVYYFNHITNASQAERPSGNSSSGGKNGQGEP 52
Score = 36.2 bits (82), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 638 ADEPPLPPGWEIRYTEDGTR-YFVDHNTRSTTFEDPRPGVPKDQKGAYGVP 687
ADE LPPGWE R + R Y+ +H T ++ E P K G P
Sbjct: 2 ADEEKLPPGWEKRMSRSSGRVYYFNHITNASQAERPSGNSSSGGKNGQGEP 52
>pdb|2EZ5|W Chain W, Solution Structure Of The Dnedd4 Ww3 Domain- Comm Lpsy
Peptide Complex
Length = 46
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 404 QPLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSER 439
+PLPP W ++ P GR +++DH +R TTW P + R
Sbjct: 9 EPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRNGR 44
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 509 QPLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSER 544
+PLPP W ++ P GR +++DH +R TTW P + R
Sbjct: 9 EPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRNGR 44
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 634 GQIGA-DEPPLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPRPG 675
G +G+ +E PLPP W ++ +G +F+DH +R TT+ DPR G
Sbjct: 1 GPLGSGEEEPLPPRWSMQVAPNGRTFFIDHASRRTTWIDPRNG 43
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
LP W +V P+GR +F++H +R T W DPR
Sbjct: 11 LPPRWSMQVAPNGRTFFIDHASRRTTWIDPR 41
>pdb|1WMV|A Chain A, Solution Structure Of The Second Ww Domain Of Wwox
Length = 54
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 595 GSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
G LP GWE+ +G+V+FV+H N+ T + DPR
Sbjct: 10 GDLPYGWEQETDENGQVFFVDHINKRTTYLDPR 42
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 643 LPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
LP GWE E+G +FVDH + TT+ DPR
Sbjct: 12 LPYGWEQETDENGQVFFVDHINKRTTYLDPR 42
Score = 33.1 bits (74), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 406 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
LP GWE D G+V++VDH + TT+ P
Sbjct: 12 LPYGWEQETDENGQVFFVDHINKRTTYLDP 41
Score = 33.1 bits (74), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%)
Query: 511 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
LP GWE D G+V++VDH + TT+ P
Sbjct: 12 LPYGWEQETDENGQVFFVDHINKRTTYLDP 41
>pdb|1E0M|A Chain A, Prototype Ww Domain
Length = 37
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 23/31 (74%)
Query: 643 LPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
LPPGW+ T +G Y+ +HNT+++T+ DPR
Sbjct: 4 LPPGWDEYKTHNGKTYYYNHNTKTSTWTDPR 34
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 406 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
LPPGW+ + G+ YY +HNT+++TW P
Sbjct: 4 LPPGWDEYKTHNGKTYYYNHNTKTSTWTDP 33
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 511 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
LPPGW+ + G+ YY +HNT+++TW P
Sbjct: 4 LPPGWDEYKTHNGKTYYYNHNTKTSTWTDP 33
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
LP GW+ +G+ Y+ NH +T+ W DPR
Sbjct: 4 LPPGWDEYKTHNGKTYYYNHNTKTSTWTDPR 34
Score = 30.4 bits (67), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
GW+ + G+ YY +HNT++S+W P+
Sbjct: 7 GWDEYKTHNGKTYYYNHNTKTSTWTDPR 34
>pdb|1UGK|A Chain A, Solution Structure Of The First C2 Domain Of Synaptotagmin
Iv From Human Fetal Brain (Kiaa1342)
Length = 138
Score = 39.3 bits (90), Expect = 0.012, Method: Composition-based stats.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 148 LKPNPYIELYV--DYKNPKTTRVVKNTYQPKWNEEFTVLVSPYSIIL-----FRLLDHRT 200
+ +PYI++ + + K+ TRV++ T P ++E FT PY+ I F +L
Sbjct: 42 MTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSFDR 101
Query: 201 FRRDCTIGEKRLNIYGV 217
F RD IGE + + G+
Sbjct: 102 FSRDDIIGEVLIPLSGI 118
>pdb|2YSE|A Chain A, Solution Structure Of The Second Ww Domain From The Human
Membrane-Associated Guanylate Kinase, Ww And Pdz Domain-
Containing Protein 1. Magi-1
Length = 60
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 592 DALGSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPRTQGQEIGQI 636
D+ LP+GWE+ P +Y+V+H NR TQ+E+P + + Q+
Sbjct: 9 DSELELPAGWEKIEDPVYGIYYVDHINRKTQYENPVLEAKRKKQL 53
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 406 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
LP GWE DP +YYVDH R T ++ P
Sbjct: 14 LPAGWEKIEDPVYGIYYVDHINRKTQYENP 43
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 18/30 (60%)
Query: 511 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
LP GWE DP +YYVDH R T ++ P
Sbjct: 14 LPAGWEKIEDPVYGIYYVDHINRKTQYENP 43
>pdb|2NSQ|A Chain A, Crystal Structure Of The C2 Domain Of The Human E3
Ubiquitin-Protein Ligase Nedd4-Like Protein
Length = 155
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 7/66 (10%)
Query: 151 NPYIEL--YVDYKNPKT----TRVVKNTYQPKWNEEFTVLVSPYS-IILFRLLDHRTFRR 203
+PY++L YV +N + T+ +K T PKWNEEF V+P + +LF + D R
Sbjct: 43 DPYVKLSLYVADENRELALVQTKTIKKTLNPKWNEEFYFRVNPSNHRLLFEVFDENRLTR 102
Query: 204 DCTIGE 209
D +G+
Sbjct: 103 DDFLGQ 108
>pdb|2YSG|A Chain A, Solution Structure Of The Ww Domain From The Human
Syntaxin- Binding Protein 4
Length = 40
Score = 38.1 bits (87), Expect = 0.022, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 643 LPPGWEIRYTEDGTRYFVDHNTRSTTFEDP 672
LP GWE YT DG +YF++H T++T++ P
Sbjct: 8 LPYGWEEAYTADGIKYFINHVTQTTSWIHP 37
Score = 37.0 bits (84), Expect = 0.060, Method: Composition-based stats.
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDP 626
LP GWE DG YF+NH +TT W P
Sbjct: 8 LPYGWEEAYTADGIKYFINHVTQTTSWIHP 37
Score = 30.4 bits (67), Expect = 4.8, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 406 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
LP GWE G Y+++H T++T+W P
Sbjct: 8 LPYGWEEAYTADGIKYFINHVTQTTSWIHP 37
Score = 30.4 bits (67), Expect = 4.8, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 18/30 (60%)
Query: 511 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
LP GWE G Y+++H T++T+W P
Sbjct: 8 LPYGWEEAYTADGIKYFINHVTQTTSWIHP 37
>pdb|1I6C|A Chain A, Solution Structure Of Pin1 Ww Domain
pdb|1I8G|B Chain B, Solution Structure Of Pin1 Ww Domain Complexed With Cdc25
Phosphothreonine Peptide
pdb|1I8H|B Chain B, Solution Structure Of Pin1 Ww Domain Complexed With Human
Tau Phosphothreonine Peptide
Length = 39
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 406 LPPGWELRRD-PRGRVYYVDHNTRSTTWQRPN 436
LPPGWE R GRVYY +H T ++ W+RP+
Sbjct: 2 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 33
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 511 LPPGWELRRD-PRGRVYYVDHNTRSTTWQRPN 541
LPPGWE R GRVYY +H T ++ W+RP+
Sbjct: 2 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 33
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 597 LPSGWERRV-QPDGRVYFVNHKNRTTQWEDP 626
LP GWE+R+ + GRVY+ NH +QWE P
Sbjct: 2 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 32
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 377 GWEIRQD-TYGRRYYVDHNTRSSSWERPQ 404
GWE R + GR YY +H T +S WERP
Sbjct: 5 GWEKRMSRSSGRVYYFNHITNASQWERPS 33
Score = 29.3 bits (64), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 643 LPPGWEIRYTEDGTR-YFVDHNTRSTTFEDP 672
LPPGWE R + R Y+ +H T ++ +E P
Sbjct: 2 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 32
>pdb|1RLW|A Chain A, Calcium-Phospholipid Binding Domain From Cytosolic
Phospholipase A2
Length = 126
Score = 38.1 bits (87), Expect = 0.026, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 139 TVGGQGGGLLKPNPYIELYVDYK--NPKTTRVVKNTYQPKWNEEFTVLVSP 187
T G G L P+PY+EL++ + K TR N P WNE F ++ P
Sbjct: 16 TKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDP 66
>pdb|2KCF|A Chain A, The Nmr Solution Structure Of The Isolated Apo Pin1 Ww
Domain
Length = 36
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 406 LPPGWELRRD-PRGRVYYVDHNTRSTTWQRPN 436
LPPGWE R GRVYY +H T ++ W+RP+
Sbjct: 4 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 35
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 511 LPPGWELRRD-PRGRVYYVDHNTRSTTWQRPN 541
LPPGWE R GRVYY +H T ++ W+RP+
Sbjct: 4 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 35
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 597 LPSGWERRV-QPDGRVYFVNHKNRTTQWEDP 626
LP GWE+R+ + GRVY+ NH +QWE P
Sbjct: 4 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 34
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 377 GWEIRQD-TYGRRYYVDHNTRSSSWERPQ 404
GWE R + GR YY +H T +S WERP
Sbjct: 7 GWEKRMSRSSGRVYYFNHITNASQWERPS 35
>pdb|2LB3|A Chain A, Structure Of The Ww Domain Of Pin1 In Complex With A Human
Phosphorylated Smad3 Derived Peptide
Length = 36
Score = 38.1 bits (87), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 406 LPPGWELRRD-PRGRVYYVDHNTRSTTWQRPN 436
LPPGWE R GRVYY +H T ++ W+RP+
Sbjct: 2 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 33
Score = 38.1 bits (87), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 511 LPPGWELRRD-PRGRVYYVDHNTRSTTWQRPN 541
LPPGWE R GRVYY +H T ++ W+RP+
Sbjct: 2 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 33
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 597 LPSGWERRV-QPDGRVYFVNHKNRTTQWEDP 626
LP GWE+R+ + GRVY+ NH +QWE P
Sbjct: 2 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 32
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 377 GWEIRQD-TYGRRYYVDHNTRSSSWERPQ 404
GWE R + GR YY +H T +S WERP
Sbjct: 5 GWEKRMSRSSGRVYYFNHITNASQWERPS 33
>pdb|2ZAJ|A Chain A, Solution Structure Of The Short-Isoform Of The Second Ww
Domain From The Human Membrane-Associated Guanylate
Kinase, Ww And Pdz Domain-Containing Protein 1 (Magi-1)
Length = 49
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDP 626
LP+GWE+ P +Y+V+H NR TQ+E+P
Sbjct: 14 LPAGWEKIEDPVYGIYYVDHINRKTQYENP 43
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 406 LPPGWELRRDPRGRVYYVDHNTRSTTWQRPNS 437
LP GWE DP +YYVDH R T ++ P+
Sbjct: 14 LPAGWEKIEDPVYGIYYVDHINRKTQYENPSG 45
Score = 35.8 bits (81), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 19/32 (59%)
Query: 511 LPPGWELRRDPRGRVYYVDHNTRSTTWQRPNS 542
LP GWE DP +YYVDH R T ++ P+
Sbjct: 14 LPAGWEKIEDPVYGIYYVDHINRKTQYENPSG 45
>pdb|1BCI|A Chain A, C2 Domain Of Cytosolic Phospholipase A2, Nmr, Minimized
Average Structure
Length = 138
Score = 37.7 bits (86), Expect = 0.035, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Query: 139 TVGGQGGGLLKPNPYIELYVDYK--NPKTTRVVKNTYQPKWNEEFTVLVSP 187
T G G L P+PY+EL++ + K TR N P WNE F ++ P
Sbjct: 31 TKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDP 81
>pdb|1CJY|A Chain A, Human Cytosolic Phospholipase A2
pdb|1CJY|B Chain B, Human Cytosolic Phospholipase A2
Length = 749
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 5/80 (6%)
Query: 139 TVGGQGGGLLKPNPYIELYVDY--KNPKTTRVVKNTYQPKWNEEFTVLVSPY--SIILFR 194
T G G L P+PY+EL++ + K TR N P WNE F ++ P +++
Sbjct: 31 TKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEIT 90
Query: 195 LLDHRTFRRDCTIGEKRLNI 214
L+D + D T+G +
Sbjct: 91 LMD-ANYVMDETLGTATFTV 109
>pdb|3PYC|A Chain A, Crystal Structure Of Human Smurf1 C2 Domain
Length = 132
Score = 36.2 bits (82), Expect = 0.082, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 150 PNPYIELYVDYKNP-KTTRVVKNTYQPKWNEEFTVLVSPYSIILFRLLDHRTFRR 203
P+P+ ++ VD +T VKNT PKWN+ + + V I + +H+ +
Sbjct: 26 PDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTDSITISVWNHKKIHK 80
>pdb|2L5F|A Chain A, Solution Structure Of The Tandem Ww Domains From HypaFBP11
Length = 92
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 386 GRRYYVDHNTRSSSWERPQPLP-PG--------WELRRDPRGRVYYVDHNTRSTTWQRP 435
GR YY + T+ S+WE+P L P W+ + G+ YY + T+ + W +P
Sbjct: 24 GRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKTYYYNSQTKESRWAKP 82
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 9/59 (15%)
Query: 491 GRRYYVDHNTRSSSWERPQPLP-PG--------WELRRDPRGRVYYVDHNTRSTTWQRP 540
GR YY + T+ S+WE+P L P W+ + G+ YY + T+ + W +P
Sbjct: 24 GRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCPWKEYKSDSGKTYYYNSQTKESRWAKP 82
Score = 33.9 bits (76), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Query: 599 SGWERRVQPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEPPLPPGWEIRYTEDGTRY 658
S W PDGR Y+ N + + + WE P Q+ + P W+ ++ G Y
Sbjct: 14 SMWTEHKSPDGRTYYYNTETKQSTWEKPDDLKTPAEQLLSKCP-----WKEYKSDSGKTY 68
Query: 659 FVDHNTRSTTFEDPR 673
+ + T+ + + P+
Sbjct: 69 YYNSQTKESRWAKPK 83
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 410 WELRRDPRGRVYYVDHNTRSTTWQRPN 436
W + P GR YY + T+ +TW++P+
Sbjct: 16 WTEHKSPDGRTYYYNTETKQSTWEKPD 42
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 515 WELRRDPRGRVYYVDHNTRSTTWQRPN 541
W + P GR YY + T+ +TW++P+
Sbjct: 16 WTEHKSPDGRTYYYNTETKQSTWEKPD 42
>pdb|2D8K|A Chain A, Solution Structure Of The First C2 Domain Of Synaptotagmin
Vii
Length = 141
Score = 36.2 bits (82), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Query: 151 NPYIELYV--DYKNPKTTRVVKNTYQPKWNEEFTVLVSPYS-----IILFRLLDHRTFRR 203
+P++++Y+ D K+ T+V + P WNE F PY I+ ++LD+ F R
Sbjct: 48 DPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYDRFSR 107
Query: 204 DCTIGE 209
+ IGE
Sbjct: 108 NDPIGE 113
>pdb|2ENP|A Chain A, Solution Structure Of The First C2 Domain From Human BK
Protein
Length = 147
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Query: 151 NPYIELYV--DYKNPKTTRVVKNTYQPKWNEEFTV----LVSPYSIILFRLLDHRTFRRD 204
NPY+++ + D KN K T V + T +P + E +T L + +L ++D F R
Sbjct: 55 NPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLLTVVDFDKFSRH 114
Query: 205 CTIGE 209
C IG+
Sbjct: 115 CVIGK 119
>pdb|3JZY|A Chain A, Crystal Structure Of Human Intersectin 2 C2 Domain
Length = 510
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/121 (23%), Positives = 50/121 (41%), Gaps = 9/121 (7%)
Query: 99 QEIDVEDWQRNAIYRHYTRNSKQTTRVVKNTYQPKWNEEFTVGGQGGGLLKPNPYIELYV 158
Q ID E QR Y+ ++ + R++ + + E G K NPY E+ +
Sbjct: 363 QYIDTEKKQREKAYQARSQKTSGIGRLMVHVIEAT---ELKACKPNG---KSNPYCEISM 416
Query: 159 DYKNPKTTRVVKNTYQPKWNEEFTVLVSPY--SIILFRLLDHRTFRRDCTIGEKRLNIYG 216
++ TTR +++T PKWN + ++ L D F D +G + +
Sbjct: 417 GSQS-YTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQFSPDDFLGRTEIPVAK 475
Query: 217 V 217
+
Sbjct: 476 I 476
>pdb|3M7F|B Chain B, Crystal Structure Of The Nedd4 C2GRB10 SH2 COMPLEX
Length = 176
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 166 TRVVKNTYQPKWNEEFTVLVSPYS-IILFRLLDHRTFRRDCTIGEKRLNIY 215
T+ +K + PKWNEE V P ILF + D RD +G+ + +Y
Sbjct: 50 TKTIKKSLNPKWNEEILFRVLPQRHRILFEVFDENRLTRDDFLGQVDVPLY 100
>pdb|1EG3|A Chain A, Structure Of A Dystrophin Ww Domain Fragment In Complex
With A Beta-Dystroglycan Peptide
pdb|1EG4|A Chain A, Structure Of A Dystrophin Ww Domain Fragment In Complex
With A Beta-Dystroglycan Peptide
Length = 261
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 596 SLPSGWERRVQPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGAD 639
S+ WER + P+ Y++NH+ +TT W+ P+ E+ Q AD
Sbjct: 11 SVQGPWERAISPNKVPYYINHETQTTCWDHPKM--TELYQSLAD 52
>pdb|2LB0|A Chain A, Structure Of The First Ww Domain Of Human Smurf1 In
Complex With A Di- Phosphorylated Human Smad1 Derived
Peptide
Length = 36
Score = 34.7 bits (78), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
LP G+E+R G+VYF++ + + W DPR
Sbjct: 5 LPEGYEQRTTVQGQVYFLHTQTGVSTWHDPR 35
>pdb|2JQZ|A Chain A, Solution Structure Of The C2 Domain Of Human Smurf2
Length = 131
Score = 34.7 bits (78), Expect = 0.26, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 150 PNPYIELYVDYKNP-KTTRVVKNTYQPKWNEEFTVLVSPYSIILFRLLDHRTFRR 203
P+P+ ++ VD +T VKNT PKWN+ + + + + + +H+ +
Sbjct: 24 PDPFAKVVVDGSGQCHSTDTVKNTLDPKWNQHYDLYIGKSDSVTISVWNHKKIHK 78
>pdb|2LAZ|A Chain A, Structure Of The First Ww Domain Of Human Smurf1 In
Complex With A Mono-Phosphorylated Human Smad1 Derived
Peptide
Length = 33
Score = 34.3 bits (77), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
LP G+E+R G+VYF++ + + W DPR
Sbjct: 2 LPEGYEQRTTVQGQVYFLHTQTGVSTWHDPR 32
>pdb|1V27|A Chain A, Solution Structure Of The First C2 Domain Of Rim2
Length = 141
Score = 34.3 bits (77), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Query: 151 NPYIELYV----DYKNPKTTRVVKNTYQPKWNEEF 181
NPY+++Y KN + T+ VK T +PKWN+ F
Sbjct: 43 NPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTF 77
>pdb|2BWQ|A Chain A, Crystal Structure Of The Rim2 C2a-Domain At 1.4 Angstrom
Resolution
Length = 129
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%), Gaps = 4/35 (11%)
Query: 151 NPYIELYV----DYKNPKTTRVVKNTYQPKWNEEF 181
NPY+++Y KN + T+ VK T +PKWN+ F
Sbjct: 40 NPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTF 74
>pdb|1YWI|A Chain A, Structure Of The Fbp11ww1 Domain Complexed To The Peptide
Apptppplpp
pdb|1YWJ|A Chain A, Structure Of The Fbp11ww1 Domain
Length = 41
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 593 ALGSLPSGWERRVQPDGRVYFVNHKNRTTQWEDP 626
++GS S W PDGR Y+ N + + + WE P
Sbjct: 6 SVGSAKSMWTEHKSPDGRTYYYNTETKQSTWEKP 39
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 410 WELRRDPRGRVYYVDHNTRSTTWQRPN 436
W + P GR YY + T+ +TW++P+
Sbjct: 14 WTEHKSPDGRTYYYNTETKQSTWEKPD 40
Score = 30.0 bits (66), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 515 WELRRDPRGRVYYVDHNTRSTTWQRPN 541
W + P GR YY + T+ +TW++P+
Sbjct: 14 WTEHKSPDGRTYYYNTETKQSTWEKPD 40
>pdb|3B7Y|A Chain A, Crystal Structure Of The C2 Domain Of The E3 Ubiquitin-
Protein Ligase Nedd4
pdb|3B7Y|B Chain B, Crystal Structure Of The C2 Domain Of The E3 Ubiquitin-
Protein Ligase Nedd4
Length = 153
Score = 33.5 bits (75), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Query: 166 TRVVKNTYQPKWNEEFTVLVSPYS-IILFRLLDHRTFRRDCTIGEKRLNIY 215
T+ +K + PKWNEE V P +LF + D RD +G+ + +Y
Sbjct: 62 TKTIKKSLNPKWNEEILFRVHPQQHRLLFEVFDENRLTRDDFLGQVDVPLY 112
>pdb|2KBU|A Chain A, Nmr Solution Structure Of Pin1 Ww Domain Mutant With Beta
Turn Mimic At Position 12
Length = 31
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Query: 406 LPPGWELRRDPRGRVYYVDHNTRSTTWQRPN 436
LPPGWE R RVYY +H T ++ ++RP+
Sbjct: 2 LPPGWEKRMS--XRVYYFNHITNASQFERPS 30
Score = 32.7 bits (73), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Query: 511 LPPGWELRRDPRGRVYYVDHNTRSTTWQRPN 541
LPPGWE R RVYY +H T ++ ++RP+
Sbjct: 2 LPPGWEKRMS--XRVYYFNHITNASQFERPS 30
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 2/30 (6%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDP 626
LP GWE+R+ RVY+ NH +Q+E P
Sbjct: 2 LPPGWEKRM--SXRVYYFNHITNASQFERP 29
>pdb|1RSY|A Chain A, Structure Of The First C2-domain Of Synaptotagmin I: A
Novel Ca2+(slash)phospholipid Binding Fold
Length = 152
Score = 32.0 bits (71), Expect = 1.7, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 151 NPYIELYV--DYKNPKTTRVVKNTYQPKWNEEFTVLVSPYS-----IILFRLLDHRTFRR 203
+PY+++++ D K T+V + T P +NE+FT V PYS ++ + D F +
Sbjct: 64 DPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKV-PYSELGGKTLVMAVYDFDRFSK 122
Query: 204 DCTIGE 209
IGE
Sbjct: 123 HDIIGE 128
>pdb|3F04|A Chain A, Crystal Structure Of Synaptotagmin I C2a Domain
pdb|3F01|A Chain A, Crystal Structure Of Synaptotagmin I C2a Domain With
Cu(Ii)
pdb|3F05|A Chain A, Crystal Structure Of Synaptotagmin I C2a Domain With
Mn(Ii)
Length = 143
Score = 32.0 bits (71), Expect = 1.7, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 151 NPYIELYV--DYKNPKTTRVVKNTYQPKWNEEFTVLVSPYS-----IILFRLLDHRTFRR 203
+PY+++++ D K T+V + T P +NE+FT V PYS ++ + D F +
Sbjct: 56 DPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKV-PYSELGGKTLVMAVYDFDRFSK 114
Query: 204 DCTIGE 209
IGE
Sbjct: 115 HDIIGE 120
>pdb|2R83|A Chain A, Crystal Structure Analysis Of Human Synaptotagmin 1
C2a-c2b
pdb|2R83|B Chain B, Crystal Structure Analysis Of Human Synaptotagmin 1
C2a-c2b
Length = 284
Score = 32.0 bits (71), Expect = 1.8, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 151 NPYIELYV--DYKNPKTTRVVKNTYQPKWNEEFTVLVSPYS-----IILFRLLDHRTFRR 203
+PY+++++ D K T+V + T P +NE+FT V PYS ++ + D F +
Sbjct: 41 DPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKV-PYSELAGKTLVMAVYDFDRFSK 99
Query: 204 DCTIGE 209
IGE
Sbjct: 100 HDIIGE 105
>pdb|3F00|A Chain A, Crystal Structure Of Synaptotagmin I C2a Domain With
Cu(Ii)
Length = 143
Score = 32.0 bits (71), Expect = 1.8, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 151 NPYIELYV--DYKNPKTTRVVKNTYQPKWNEEFTVLVSPYS-----IILFRLLDHRTFRR 203
+PY+++++ D K T+V + T P +NE+FT V PYS ++ + D F +
Sbjct: 56 DPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKV-PYSELGGKTLVMAVYDFDRFSK 114
Query: 204 DCTIGE 209
IGE
Sbjct: 115 HDIIGE 120
>pdb|1BYN|A Chain A, Solution Structure Of The Calcium-Bound First C2-Domain Of
Synaptotagmin I
pdb|2K8M|A Chain A, S100a13-C2a Binary Complex Structure
pdb|2K8M|D Chain D, S100a13-C2a Binary Complex Structure
pdb|2K45|A Chain A, C2a Domain Of Synaptototagmin I Solution Structure In The
Fgf-1-C2a Binary Complex: Key Component In The
Fibroblast Growthfactor Non-Classical Pathway
pdb|2K4A|A Chain A, Fgf-1-C2a Binary Complex Structure: A Key Component In The
Fibroblast Growthfactor Non-Classical Pathway
pdb|2KI6|A Chain A, The Fgf1-S100a13-C2a Hetero-Hexameric Complex Structure: A
C In The Non-Classical Pathway For Fgf1 Secretion
pdb|2KI6|F Chain F, The Fgf1-S100a13-C2a Hetero-Hexameric Complex Structure: A
C In The Non-Classical Pathway For Fgf1 Secretion
Length = 128
Score = 31.6 bits (70), Expect = 2.1, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 151 NPYIELYV--DYKNPKTTRVVKNTYQPKWNEEFTVLVSPYS-----IILFRLLDHRTFRR 203
+PY+++++ D K T+V + T P +NE+FT V PYS ++ + D F +
Sbjct: 39 DPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKV-PYSELGGKTLVMAVYDFDRFSK 97
Query: 204 DCTIGE 209
IGE
Sbjct: 98 HDIIGE 103
>pdb|1H98|A Chain A, New Insights Into Thermostability Of Bacterial
Ferredoxins: High Resolution Crystal Structure Of The
Seven-Iron Ferredoxin From Thermus Thermophilus
Length = 78
Score = 31.2 bits (69), Expect = 2.7, Method: Composition-based stats.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 924 CFSSLPGHAVFPWEDLPNSWRFCIEK 949
C + P +A++P ED+P W+ IEK
Sbjct: 45 CVPACPVNAIYPEEDVPEQWKSYIEK 70
>pdb|4DNL|A Chain A, Crystal Structure Of A C2 Domain Of A Protein Kinase C
Alpha (Prkca) From Homo Sapiens At 1.90 A Resolution
Length = 140
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 146 GLLKPNPYIELYVDYKN--PKTTRVVKNTYQPKWNEEFTVLVSP 187
GL P ++L D KN + T+ +++T P+WNE FT + P
Sbjct: 37 GLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKP 80
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 119 SKQTTRVVKNTYQPKWNEEFT 139
SKQ T+ +++T P+WNE FT
Sbjct: 55 SKQKTKTIRSTLNPQWNESFT 75
>pdb|1DSY|A Chain A, C2 Domain From Protein Kinase C (Alpha) Complexed With
Ca2+ And Phosphatidylserine
Length = 139
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Query: 146 GLLKPNPYIELYVDYKN--PKTTRVVKNTYQPKWNEEFTVLVSP 187
GL P ++L D KN + T+ +++T P+WNE FT + P
Sbjct: 36 GLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKP 79
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 119 SKQTTRVVKNTYQPKWNEEFT 139
SKQ T+ +++T P+WNE FT
Sbjct: 54 SKQKTKTIRSTLNPQWNESFT 74
>pdb|3GPE|A Chain A, Crystal Structure Analysis Of Pkc (Alpha)-C2 Domain
Complexed With Ca2+ And Ptdins(4,5)p2
pdb|3RDJ|A Chain A, Rat Pkc C2 Domain Apo
pdb|3TWY|A Chain A, Rat Pkc C2 Domain Bound To Pb
Length = 137
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 2/45 (4%)
Query: 145 GGLLKPNPYIELYVDYKN--PKTTRVVKNTYQPKWNEEFTVLVSP 187
GL P ++L D KN + T+ +++T P+WNE FT + P
Sbjct: 34 NGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKP 78
Score = 30.4 bits (67), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 11/21 (52%), Positives = 16/21 (76%)
Query: 119 SKQTTRVVKNTYQPKWNEEFT 139
SKQ T+ +++T P+WNE FT
Sbjct: 53 SKQKTKTIRSTLNPQWNESFT 73
>pdb|2YSH|A Chain A, Solution Structure Of The Ww Domain From The Human Growth-
Arrest-Specific Protein 7, Gas-7
Length = 40
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 406 LPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSE 438
LPPGW+ P+GR YYV+ T TTW+RP+S
Sbjct: 8 LPPGWQSYLSPQGRRYYVNTTTNETTWERPSSS 40
Score = 30.8 bits (68), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 511 LPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSE 543
LPPGW+ P+GR YYV+ T TTW+RP+S
Sbjct: 8 LPPGWQSYLSPQGRRYYVNTTTNETTWERPSSS 40
>pdb|3PT3|A Chain A, Crystal Structure Of The C-Terminal Lobe Of The Human Ubr5
Hect Domain
pdb|3PT3|B Chain B, Crystal Structure Of The C-Terminal Lobe Of The Human Ubr5
Hect Domain
Length = 118
Score = 30.4 bits (67), Expect = 5.4, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 953 DTWLPRSHTCFNRLDLPPYKSYDQMVEKLNYAIEETEGFG 992
D LP ++TC +RL +P Y S + +KL AI +T+ FG
Sbjct: 78 DQHLPTANTCISRLYVPLYSSKQILKQKLLLAI-KTKNFG 116
>pdb|1ZR7|A Chain A, Solution Structure Of The First Ww Domain Of Fbp11
pdb|2DYF|A Chain A, Solution Structure Of The First Ww Domain Of Fbp11 HYPA
(Fbp11 Ww1) Complexed With A Pl (Pplp) Motif Peptide
Ligand
Length = 30
Score = 30.0 bits (66), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 410 WELRRDPRGRVYYVDHNTRSTTWQRPN 436
W + P GR YY + T+ +TW++P+
Sbjct: 3 WTEHKSPDGRTYYYNTETKQSTWEKPD 29
Score = 30.0 bits (66), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 515 WELRRDPRGRVYYVDHNTRSTTWQRPN 541
W + P GR YY + T+ +TW++P+
Sbjct: 3 WTEHKSPDGRTYYYNTETKQSTWEKPD 29
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,097,948
Number of Sequences: 62578
Number of extensions: 1329234
Number of successful extensions: 2976
Number of sequences better than 100.0: 110
Number of HSP's better than 100.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 2410
Number of HSP's gapped (non-prelim): 516
length of query: 994
length of database: 14,973,337
effective HSP length: 108
effective length of query: 886
effective length of database: 8,214,913
effective search space: 7278412918
effective search space used: 7278412918
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)