RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16327
(994 letters)
>d1nd7a_ d.148.1.1 (A:) WW domain-containing protein 1, WWP1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 374
Score = 254 bits (650), Expect = 7e-77
Identities = 170/294 (57%), Positives = 203/294 (69%), Gaps = 6/294 (2%)
Query: 694 FRWKLSQFRYLCHHNVLPSHIKITVARQTLFEDSYHQVMRLPAYELRRRLYIIFRGEEGL 753
FRWKL+ FRYLC N LPSH+KI V+RQTLFEDS+ Q+M L Y+LRRRLY+IFRGEEGL
Sbjct: 4 FRWKLAHFRYLCQSNALPSHVKINVSRQTLFEDSFQQIMALKPYDLRRRLYVIFRGEEGL 63
Query: 754 DYGGVSREWFFLLSHEVLNPMYCLFEYANKNNYSLQINPASYVNPDHLLYFKFIGRFIAM 813
DYGG++REWFFLLSHEVLNPMYCLFEYA KNNY LQINPAS +NPDHL YF FIGRFIAM
Sbjct: 64 DYGGLAREWFFLLSHEVLNPMYCLFEYAGKNNYCLQINPASTINPDHLSYFCFIGRFIAM 123
Query: 814 ALYHGRFIYSGFTMPFYKRMLNKKLVMKDIESIDPEFYNSLVWIRDNNIDECGLELYLSV 873
AL+HG+FI +GF++PFYKRML+KKL +KD+ESID EFYNSL+WIRDNNI+ECGLE+Y SV
Sbjct: 124 ALFHGKFIDTGFSLPFYKRMLSKKLTIKDLESIDTEFYNSLIWIRDNNIEECGLEMYFSV 183
Query: 874 DFEILGQVIHHELKENGDKIRVCEENKEEY----MRWYGSGSSCERAI-VRREPVCFSSL 928
D EILG+V H+LK G I V EENK+EY W S E+ L
Sbjct: 184 DMEILGKVTSHDLKLGGSNILVTEENKDEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPL 243
Query: 929 PGHAVFPWEDLPNSWRFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYDQMVEKLN 982
F ++L E D W + + + Q V++ +
Sbjct: 244 QWLQYFDEKELEVMLCGMQEVDLAD-WQRNTVYRHYTRNSKQIIWFWQFVKETD 296
Score = 82.9 bits (204), Expect = 3e-17
Identities = 40/46 (86%), Positives = 44/46 (95%)
Query: 944 RFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYDQMVEKLNYAIEETE 989
+FCIEKVGKDTWLPRSHTCFNRLDLPPYKSY+Q+ EKL +AIEETE
Sbjct: 329 KFCIEKVGKDTWLPRSHTCFNRLDLPPYKSYEQLKEKLLFAIEETE 374
Score = 78.6 bits (193), Expect = 5e-16
Identities = 56/74 (75%), Positives = 68/74 (91%)
Query: 48 DFYPRLMTEWRMTRGIEEQTKAFLDGFNEVVPIEWLKYFDERELELILCGMQEIDVEDWQ 107
D Y LMTEWR +RG++EQTKAFLDGFNEVVP++WL+YFDE+ELE++LCGMQE+D+ DWQ
Sbjct: 211 DEYIGLMTEWRFSRGVQEQTKAFLDGFNEVVPLQWLQYFDEKELEVMLCGMQEVDLADWQ 270
Query: 108 RNAIYRHYTRNSKQ 121
RN +YRHYTRNSKQ
Sbjct: 271 RNTVYRHYTRNSKQ 284
>d1c4za_ d.148.1.1 (A:) Ubiquitin-protein ligase E3a (E6ap) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 350
Score = 168 bits (426), Expect = 2e-46
Identities = 52/200 (26%), Positives = 106/200 (53%), Gaps = 9/200 (4%)
Query: 713 HIKITVARQTLFEDSYHQ---VMRLPAYELRRRLYIIFRGEEGLDYGGVSREWFFLLSHE 769
++++ V R + +D+ + + +L+++LY+ F GE+G+D GGVS+E+F L+ E
Sbjct: 3 YLRLKVRRDHIIDDALVRLEMIAMENPADLKKQLYVEFEGEQGVDEGGVSKEFFQLVVEE 62
Query: 770 VLNPMYCLFEYANKNNYSLQINPASYVNPDHLLYFKFIGRFIAMALYHGRFIYSGFTMPF 829
+ NP +F Y ++ + + + F IG + +A+Y+ + F M
Sbjct: 63 IFNPDIGMFTYDEST----KLFWFNPSSFETEGQFTLIGIVLGLAIYNNCILDVHFPMVV 118
Query: 830 YKRMLNKKLVMKDIESIDPEFYNSLVWIR--DNNIDECGLELYLSVDFEILGQVIHHELK 887
Y++++ KK +D+ P Y SL + + N+++ + + ++ G + ++LK
Sbjct: 119 YRKLMGKKGTFRDLGDSHPVLYQSLKDLLEYEGNVEDDMMITFQISQTDLFGNPMMYDLK 178
Query: 888 ENGDKIRVCEENKEEYMRWY 907
ENGDKI + EN++E++ Y
Sbjct: 179 ENGDKIPITNENRKEFVNLY 198
Score = 72.5 bits (177), Expect = 5e-14
Identities = 22/46 (47%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 942 SWRFCIEKVGKDT-WLPRSHTCFNRLDLPPYKSYDQMVEKLNYAIE 986
+ I K G DT LP SHTCFN L LP Y S +++ E+L AI
Sbjct: 303 KLKMIIAKNGPDTERLPTSHTCFNVLLLPEYSSKEKLKERLLKAIT 348
Score = 68.2 bits (166), Expect = 1e-12
Identities = 25/90 (27%), Positives = 44/90 (48%), Gaps = 2/90 (2%)
Query: 44 NMRFDFYPRLMTEWRMTRGIEEQTKAFLDGFNEVVPIEWLKY-FDERELELILCGMQEID 102
N + L +++ + + +E+Q KAF GF+ V LKY F E+EL++CG + +D
Sbjct: 188 NENRKEFVNLYSDYILNKSVEKQFKAFRRGFHMVTNESPLKYLFRPEEIELLICGSRNLD 247
Query: 103 VEDWQRNAIYRH-YTRNSKQTTRVVKNTYQ 131
+ + Y YTR+S + +
Sbjct: 248 FQALEETTEYDGGYTRDSVLIREFWEIVHS 277
>d1i5hw_ b.72.1.1 (W:) Ubiquitin ligase NEDD4 WWIII domain {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 50
Score = 75.2 bits (185), Expect = 1e-17
Identities = 25/48 (52%), Positives = 30/48 (62%)
Query: 586 GVTEEDDALGSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPRTQGQEI 633
G + + LG LP GWE R DGRV+F+NH + TQWEDPR Q I
Sbjct: 1 GSPVDSNDLGPLPPGWEERTHTDGRVFFINHNIKKTQWEDPRMQNVAI 48
Score = 65.9 bits (161), Expect = 2e-14
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 3/38 (7%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSERLQH 442
PLPPGWE R GRV++++HN + T W+ P R+Q+
Sbjct: 11 PLPPGWEERTHTDGRVFFINHNIKKTQWEDP---RMQN 45
Score = 65.9 bits (161), Expect = 2e-14
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 3/38 (7%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSERLQH 547
PLPPGWE R GRV++++HN + T W+ P R+Q+
Sbjct: 11 PLPPGWEERTHTDGRVFFINHNIKKTQWEDP---RMQN 45
Score = 64.4 bits (157), Expect = 7e-14
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 639 DEPPLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
D PLPPGWE R DG +F++HN + T +EDPR
Sbjct: 8 DLGPLPPGWEERTHTDGRVFFINHNIKKTQWEDPR 42
Score = 64.0 bits (156), Expect = 1e-13
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 363 GLPPALPPEEPLPPGWEIRQDTYGRRYYVDHNTRSSSWERP 403
G P PLPPGWE R T GR ++++HN + + WE P
Sbjct: 1 GSPVDSNDLGPLPPGWEERTHTDGRVFFINHNIKKTQWEDP 41
Score = 42.4 bits (100), Expect = 5e-06
Identities = 10/25 (40%), Positives = 16/25 (64%)
Query: 484 EEDADTYGRRYYVDHNTRSSSWERP 508
EE T GR ++++HN + + WE P
Sbjct: 17 EERTHTDGRVFFINHNIKKTQWEDP 41
>d1tk7a1 b.72.1.1 (A:1-45) Suppressor of deltex (Cg4244-pb) {Fruit
fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 45
Score = 72.8 bits (179), Expect = 8e-17
Identities = 31/38 (81%), Positives = 34/38 (89%)
Query: 592 DALGSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPRTQ 629
DALG LP GWE+++Q D RVYFVNHKNRTTQWEDPRTQ
Sbjct: 8 DALGPLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPRTQ 45
Score = 65.5 bits (160), Expect = 3e-14
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSERLQ 441
PLP GWE + RVY+V+H R+T W+ P R Q
Sbjct: 12 PLPDGWEKKIQSDNRVYFVNHKNRTTQWEDP---RTQ 45
Score = 65.5 bits (160), Expect = 3e-14
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRPNSERLQ 546
PLP GWE + RVY+V+H R+T W+ P R Q
Sbjct: 12 PLPDGWEKKIQSDNRVYFVNHKNRTTQWEDP---RTQ 45
Score = 62.4 bits (152), Expect = 3e-13
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 639 DEPPLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
PLP GWE + D YFV+H R+T +EDPR
Sbjct: 9 ALGPLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPR 43
Score = 62.0 bits (151), Expect = 4e-13
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 370 PEEPLPPGWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
PLP GWE + + R Y+V+H R++ WE P+
Sbjct: 9 ALGPLPDGWEKKIQSDNRVYFVNHKNRTTQWEDPR 43
Score = 42.4 bits (100), Expect = 4e-06
Identities = 9/26 (34%), Positives = 16/26 (61%)
Query: 484 EEDADTYGRRYYVDHNTRSSSWERPQ 509
E+ + R Y+V+H R++ WE P+
Sbjct: 18 EKKIQSDNRVYFVNHKNRTTQWEDPR 43
>d1jmqa_ b.72.1.1 (A:) Yap65 ww domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 46
Score = 69.4 bits (170), Expect = 1e-15
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 638 ADEPPLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPRPGVPK 678
D+ PLP GWE+ T G RYF +H ++TT++DPR +
Sbjct: 4 PDDVPLPAGWEMAKTSSGQRYFKNHIDQTTTWQDPRKAMLS 44
Score = 65.9 bits (161), Expect = 2e-14
Identities = 13/37 (35%), Positives = 27/37 (72%)
Query: 368 LPPEEPLPPGWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
+P + PLP GWE+ + + G+RY+ +H ++++W+ P+
Sbjct: 3 IPDDVPLPAGWEMAKTSSGQRYFKNHIDQTTTWQDPR 39
Score = 65.1 bits (159), Expect = 4e-14
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 400 WERPQ--PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
+E P PLP GWE+ + G+ Y+ +H ++TTWQ P
Sbjct: 1 FEIPDDVPLPAGWEMAKTSSGQRYFKNHIDQTTTWQDP 38
Score = 65.1 bits (159), Expect = 4e-14
Identities = 16/38 (42%), Positives = 24/38 (63%), Gaps = 2/38 (5%)
Query: 505 WERPQ--PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
+E P PLP GWE+ + G+ Y+ +H ++TTWQ P
Sbjct: 1 FEIPDDVPLPAGWEMAKTSSGQRYFKNHIDQTTTWQDP 38
Score = 63.6 bits (155), Expect = 1e-13
Identities = 16/33 (48%), Positives = 21/33 (63%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDPRTQ 629
LP+GWE G+ YF NH ++TT W+DPR
Sbjct: 9 LPAGWEMAKTSSGQRYFKNHIDQTTTWQDPRKA 41
Score = 42.0 bits (99), Expect = 5e-06
Identities = 7/26 (26%), Positives = 17/26 (65%)
Query: 484 EEDADTYGRRYYVDHNTRSSSWERPQ 509
E + G+RY+ +H ++++W+ P+
Sbjct: 14 EMAKTSSGQRYFKNHIDQTTTWQDPR 39
>d2jmfa1 b.72.1.1 (A:521-553) Ubiquitin ligase NEDD4 WWIII domain
{fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 33
Score = 65.8 bits (161), Expect = 2e-14
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
PLPPGWE+R G ++VDHNTR TT++ P
Sbjct: 2 PLPPGWEIRYTAAGERFFVDHNTRRTTFEDP 32
Score = 65.8 bits (161), Expect = 2e-14
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
PLPPGWE+R G ++VDHNTR TT++ P
Sbjct: 2 PLPPGWEIRYTAAGERFFVDHNTRRTTFEDP 32
Score = 65.4 bits (160), Expect = 2e-14
Identities = 17/33 (51%), Positives = 20/33 (60%)
Query: 595 GSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
G LP GWE R G +FV+H R T +EDPR
Sbjct: 1 GPLPPGWEIRYTAAGERFFVDHNTRRTTFEDPR 33
Score = 63.5 bits (155), Expect = 1e-13
Identities = 27/32 (84%), Positives = 28/32 (87%)
Query: 642 PLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
PLPPGWEIRYT G R+FVDHNTR TTFEDPR
Sbjct: 2 PLPPGWEIRYTAAGERFFVDHNTRRTTFEDPR 33
Score = 61.5 bits (150), Expect = 6e-13
Identities = 19/31 (61%), Positives = 24/31 (77%)
Query: 373 PLPPGWEIRQDTYGRRYYVDHNTRSSSWERP 403
PLPPGWEIR G R++VDHNTR +++E P
Sbjct: 2 PLPPGWEIRYTAAGERFFVDHNTRRTTFEDP 32
Score = 42.7 bits (101), Expect = 3e-06
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 484 EEDADTYGRRYYVDHNTRSSSWERP 508
E G R++VDHNTR +++E P
Sbjct: 8 EIRYTAAGERFFVDHNTRRTTFEDP 32
>d2nq3a1 b.7.1.1 (A:13-145) E3 ubiquitin-protein ligase Itchy {Human
(Homo sapiens) [TaxId: 9606]}
Length = 133
Score = 63.6 bits (154), Expect = 1e-12
Identities = 35/103 (33%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Query: 145 GGLLKPNPYIELYVDYKNPKTTRVVKNTYQPKWNEEFTVLVSPYSIILFRLLDHRTFRRD 204
P+PY+E+ VD K T NT PKW + TV+V+P S + FR+ H+T + D
Sbjct: 22 KNWFGPSPYVEVTVD-GQSKKTEKCNNTNSPKWKQPLTVIVTPVSKLHFRVWSHQTLKSD 80
Query: 205 CTIGEKRLNIYGVLAHYNGKCEHLEITLDLMNDSRVSPPLMSV 247
+G L+IY L N K E + +TL L D + + +
Sbjct: 81 VLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDL 123
>d1pina1 b.72.1.1 (A:6-39) Mitotic rotamase PIN1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 34
Score = 56.6 bits (137), Expect = 3e-11
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 406 LPPGWELRRDPR-GRVYYVDHNTRSTTWQRPN 436
LPPGWE R GRVYY +H T ++ W+RP+
Sbjct: 2 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 33
Score = 56.6 bits (137), Expect = 3e-11
Identities = 17/32 (53%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 511 LPPGWELRRDPR-GRVYYVDHNTRSTTWQRPN 541
LPPGWE R GRVYY +H T ++ W+RP+
Sbjct: 2 LPPGWEKRMSRSSGRVYYFNHITNASQWERPS 33
Score = 54.7 bits (132), Expect = 2e-10
Identities = 18/31 (58%), Positives = 21/31 (67%), Gaps = 1/31 (3%)
Query: 374 LPPGWEIRQD-TYGRRYYVDHNTRSSSWERP 403
LPPGWE R + GR YY +H T +S WERP
Sbjct: 2 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 32
Score = 53.5 bits (129), Expect = 4e-10
Identities = 16/31 (51%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 597 LPSGWERRVQP-DGRVYFVNHKNRTTQWEDP 626
LP GWE+R+ GRVY+ NH +QWE P
Sbjct: 2 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 32
Score = 48.5 bits (116), Expect = 2e-08
Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 643 LPPGWEIRYTE-DGTRYFVDHNTRSTTFEDP 672
LPPGWE R + G Y+ +H T ++ +E P
Sbjct: 2 LPPGWEKRMSRSSGRVYYFNHITNASQWERP 32
Score = 38.9 bits (91), Expect = 5e-05
Identities = 11/20 (55%), Positives = 14/20 (70%)
Query: 489 TYGRRYYVDHNTRSSSWERP 508
+ GR YY +H T +S WERP
Sbjct: 13 SSGRVYYFNHITNASQWERP 32
>d2rm0w1 b.72.1.1 (W:1-37) Formin binding protein FBP28 domain
{Domestic mouse (Mus musculus) [TaxId: 10090]}
Length = 37
Score = 47.1 bits (112), Expect = 7e-08
Identities = 9/31 (29%), Positives = 15/31 (48%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDPR 627
S W DG+ Y+ N++ + WE P+
Sbjct: 4 AVSEWTEYKTADGKTYYYNNRTLESTWEKPQ 34
Score = 45.9 bits (109), Expect = 2e-07
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 405 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
W + G+ YY ++ T +TW++P
Sbjct: 3 TAVSEWTEYKTADGKTYYYNNRTLESTWEKP 33
Score = 45.9 bits (109), Expect = 2e-07
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 510 PLPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
W + G+ YY ++ T +TW++P
Sbjct: 3 TAVSEWTEYKTADGKTYYYNNRTLESTWEKP 33
Score = 45.1 bits (107), Expect = 4e-07
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 373 PLPPGWEIRQDTYGRRYYVDHNTRSSSWERPQPL 406
W + G+ YY ++ T S+WE+PQ L
Sbjct: 3 TAVSEWTEYKTADGKTYYYNNRTLESTWEKPQEL 36
Score = 38.2 bits (89), Expect = 1e-04
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 484 EEDADTYGRRYYVDHNTRSSSWERPQPL 511
E G+ YY ++ T S+WE+PQ L
Sbjct: 9 TEYKTADGKTYYYNNRTLESTWEKPQEL 36
Score = 36.3 bits (84), Expect = 5e-04
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 642 PLPPGWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
W T DG Y+ ++ T +T+E P+
Sbjct: 3 TAVSEWTEYKTADGKTYYYNNRTLESTWEKPQ 34
>d1o6wa2 b.72.1.1 (A:30-75) Splicing factor prp40 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 46
Score = 45.2 bits (107), Expect = 4e-07
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 598 PSGWERRVQPDGRVYFVNHKNRTTQWEDPRTQ 629
+GW+ DG+VY+ N R T W P +
Sbjct: 13 ENGWKAAKTADGKVYYYNPTTRETSWTIPAFE 44
Score = 45.2 bits (107), Expect = 5e-07
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 409 GWELRRDPRGRVYYVDHNTRSTTWQRPNSER 439
GW+ + G+VYY + TR T+W P E+
Sbjct: 15 GWKAAKTADGKVYYYNPTTRETSWTIPAFEK 45
Score = 45.2 bits (107), Expect = 5e-07
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 514 GWELRRDPRGRVYYVDHNTRSTTWQRPNSER 544
GW+ + G+VYY + TR T+W P E+
Sbjct: 15 GWKAAKTADGKVYYYNPTTRETSWTIPAFEK 45
Score = 40.2 bits (94), Expect = 3e-05
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 377 GWEIRQDTYGRRYYVDHNTRSSSWERPQ 404
GW+ + G+ YY + TR +SW P
Sbjct: 15 GWKAAKTADGKVYYYNPTTRETSWTIPA 42
Score = 34.4 bits (79), Expect = 0.003
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 646 GWEIRYTEDGTRYFVDHNTRSTTFEDPR 673
GW+ T DG Y+ + TR T++ P
Sbjct: 15 GWKAAKTADGKVYYYNPTTRETSWTIPA 42
Score = 34.0 bits (78), Expect = 0.004
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 484 EEDADTYGRRYYVDHNTRSSSWERPQ 509
+ G+ YY + TR +SW P
Sbjct: 17 KAAKTADGKVYYYNPTTRETSWTIPA 42
>d1wfja_ b.7.1.2 (A:) C2 domain protein At1g63220 {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 136
Score = 47.0 bits (111), Expect = 9e-07
Identities = 17/86 (19%), Positives = 33/86 (38%), Gaps = 1/86 (1%)
Query: 149 KPNPYIELYVDYKNPKTTRVVKNTYQPKWNEEFTVLVS-PYSIILFRLLDHRTFRRDCTI 207
+PY++L ++ K+ P+WNE F VS + + ++ D D +
Sbjct: 30 NMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKDVGTEDDAV 89
Query: 208 GEKRLNIYGVLAHYNGKCEHLEITLD 233
GE + + V + + D
Sbjct: 90 GEATIPLEPVFVEGSIPPTAYNVVKD 115
>d1gmia_ b.7.1.1 (A:) Domain from protein kinase C epsilon {Rat
(Rattus rattus) [TaxId: 10117]}
Length = 136
Score = 44.5 bits (104), Expect = 7e-06
Identities = 20/103 (19%), Positives = 32/103 (31%), Gaps = 11/103 (10%)
Query: 142 GQGGGLLKPNPYIELYVDYKNPKTTRVVKNTYQPKWNEEFTVLVSPYSIILFRLLDHRTF 201
G +PYI L VD T + T P W++EF V I +
Sbjct: 30 GPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNGRKIELAVFHDAPI 89
Query: 202 RRDCTIGEKRLNIYGVLAHYNGKCE-----------HLEITLD 233
D + + +L + + E ++ I L
Sbjct: 90 GYDDFVANCTIQFEELLQNGSRHFEDWIDLEPEGKVYVIIDLS 132
>d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 123
Score = 42.0 bits (98), Expect = 4e-05
Identities = 16/94 (17%), Positives = 28/94 (29%), Gaps = 8/94 (8%)
Query: 151 NPYIELYVDY----KNPKTTRVVKNTYQPKWNEEFTVLVSPYSIILFRLLDHRTFRRDCT 206
P+ + + KT K T P+W F + +I L+
Sbjct: 25 QPFCAVKMKEALTTDRGKTLVQKKPTMYPEWKSTFDAHIYEGRVIQIVLMRAAEDPM--- 81
Query: 207 IGEKRLNIYGVLAHYNGKCEHLEITLDLMNDSRV 240
E + + + E LDL ++V
Sbjct: 82 -SEVTVGVSVLAERCKKNNGKAEFWLDLQPQAKV 114
Score = 27.4 bits (60), Expect = 4.1
Identities = 7/25 (28%), Positives = 10/25 (40%)
Query: 116 TRNSKQTTRVVKNTYQPKWNEEFTV 140
T + +T K T P+W F
Sbjct: 37 TTDRGKTLVQKKPTMYPEWKSTFDA 61
>d1qasa2 b.7.1.1 (A:626-756) PI-specific phospholipase C isozyme D1
(PLC-D1), C-terminal domain {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 131
Score = 40.9 bits (95), Expect = 1e-04
Identities = 14/80 (17%), Positives = 36/80 (45%), Gaps = 7/80 (8%)
Query: 149 KPNPYIELYV-----DYKNPKTTRVVKNTYQPKWNEEFTVLVSP--YSIILFRLLDHRTF 201
+P + + + D + +T + N + P+W+ EF V+ +++ F + D+ +
Sbjct: 26 IVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVEDYDSS 85
Query: 202 RRDCTIGEKRLNIYGVLAHY 221
++ IG+ + + Y
Sbjct: 86 SKNDFIGQSTIPWNSLKQGY 105
>d1a25a_ b.7.1.2 (A:) C2 domain from protein kinase c (beta) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 132
Score = 40.1 bits (93), Expect = 2e-04
Identities = 14/73 (19%), Positives = 30/73 (41%), Gaps = 7/73 (9%)
Query: 149 KPNPYIELYVDY----KNPKTTRVVKNTYQPKWNEEFTVLVSPY---SIILFRLLDHRTF 201
+PY++L + ++ + T+ +K + P+WNE F + + + D
Sbjct: 35 LSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDLT 94
Query: 202 RRDCTIGEKRLNI 214
R+ +G I
Sbjct: 95 SRNDFMGSLSFGI 107
>d1w15a_ b.7.1.2 (A:) Synaptotagmin IV {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 138
Score = 40.1 bits (93), Expect = 2e-04
Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 8/74 (10%)
Query: 149 KPNPYIELYVDYKNP----KTTRVVKNTYQPKWNEEFTVLVSP----YSIILFRLLDHRT 200
+PY+++ + + K T V K T +NE F + + F +LD
Sbjct: 35 LSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSER 94
Query: 201 FRRDCTIGEKRLNI 214
R+ IG L
Sbjct: 95 GSRNEVIGRLVLGA 108
Score = 32.0 bits (72), Expect = 0.12
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 111 IYRHYTRNSKQTTRVVKNTYQPKWNEEFT 139
+Y R SK+ T V K T +NE F
Sbjct: 44 LYHAKKRISKKKTHVKKCTPNAVFNELFV 72
>d2bwqa1 b.7.1.2 (A:729-853) Regulating synaptic membrane exocytosis
protein, rim2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 125
Score = 39.7 bits (92), Expect = 2e-04
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 11/77 (14%)
Query: 149 KPNPYIELYVDY----KNPKTTRVVKNTYQPKWNEEFTVLVSPY-----SIILFRLLDHR 199
NPY+++Y KN + T+ VK T +PKWN+ F ++ L D
Sbjct: 34 PRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWDQA 93
Query: 200 TFR--RDCTIGEKRLNI 214
R +GE + +
Sbjct: 94 RVREEESEFLGEILIEL 110
Score = 28.9 bits (64), Expect = 1.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 111 IYRHYTRNSKQTTRVVKNTYQPKWNEEFT 139
+ +K+ T+ VK T +PKWN+ F
Sbjct: 43 FLPDRSDKNKRRTKTVKKTLEPKWNQTFI 71
>d1uowa_ b.7.1.2 (A:) Synaptogamin I {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 157
Score = 39.8 bits (92), Expect = 4e-04
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 8/77 (10%)
Query: 149 KPNPYIELYVDYKN----PKTTRVVKNTYQPKWNEEFTVLVSP----YSIILFRLLDHRT 200
+PY+++++ K T + KNT P +NE F+ V ++ +LD+
Sbjct: 45 LSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDYDK 104
Query: 201 FRRDCTIGEKRLNIYGV 217
++ IG+ +
Sbjct: 105 IGKNDAIGKVFVGYNST 121
>d1ugka_ b.7.1.2 (A:) Synaptotagmin IV {Human (Homo sapiens) [TaxId:
9606]}
Length = 138
Score = 38.9 bits (90), Expect = 6e-04
Identities = 23/93 (24%), Positives = 39/93 (41%), Gaps = 5/93 (5%)
Query: 143 QGGGLLKPNPYIELYVDYKNPKTTRVVKNTYQPKWNEEFTVLVSPYS-----IILFRLLD 197
+ P + + + K+ TRV++ T P ++E FT PY+ + F +L
Sbjct: 39 EQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILS 98
Query: 198 HRTFRRDCTIGEKRLNIYGVLAHYNGKCEHLEI 230
F RD IGE + + G+ + EI
Sbjct: 99 FDRFSRDDIIGEVLIPLSGIELSEGKMLMNREI 131
>d1ywia1 b.72.1.1 (A:15-42) Huntingtin-interacting protein
HYPA/FBP11 {Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 35.1 bits (81), Expect = 0.001
Identities = 11/28 (39%), Positives = 15/28 (53%)
Query: 599 SGWERRVQPDGRVYFVNHKNRTTQWEDP 626
S W PDGR Y+ N + + + WE P
Sbjct: 1 SMWTEHKSPDGRTYYYNTETKQSTWEKP 28
Score = 34.7 bits (80), Expect = 0.002
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 410 WELRRDPRGRVYYVDHNTRSTTWQRP 435
W + P GR YY + T+ +TW++P
Sbjct: 3 WTEHKSPDGRTYYYNTETKQSTWEKP 28
Score = 34.7 bits (80), Expect = 0.002
Identities = 10/26 (38%), Positives = 16/26 (61%)
Query: 515 WELRRDPRGRVYYVDHNTRSTTWQRP 540
W + P GR YY + T+ +TW++P
Sbjct: 3 WTEHKSPDGRTYYYNTETKQSTWEKP 28
Score = 31.6 bits (72), Expect = 0.018
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 378 WEIRQDTYGRRYYVDHNTRSSSWERP 403
W + GR YY + T+ S+WE+P
Sbjct: 3 WTEHKSPDGRTYYYNTETKQSTWEKP 28
Score = 30.1 bits (68), Expect = 0.077
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 491 GRRYYVDHNTRSSSWERP 508
GR YY + T+ S+WE+P
Sbjct: 11 GRTYYYNTETKQSTWEKP 28
Score = 25.5 bits (56), Expect = 3.5
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 647 WEIRYTEDGTRYFVDHNTRSTTFEDP 672
W + DG Y+ + T+ +T+E P
Sbjct: 3 WTEHKSPDGRTYYYNTETKQSTWEKP 28
>d1o6wa1 b.72.1.1 (A:1-29) Splicing factor prp40 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 29
Score = 35.1 bits (81), Expect = 0.001
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 599 SGWERRVQPDGRVYFVNHKNRTTQWEDP 626
S W+ GR+Y+ N + + WE P
Sbjct: 2 SIWKEAKDASGRIYYYNTLTKKSTWEKP 29
Score = 34.7 bits (80), Expect = 0.001
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 410 WELRRDPRGRVYYVDHNTRSTTWQRP 435
W+ +D GR+YY + T+ +TW++P
Sbjct: 4 WKEAKDASGRIYYYNTLTKKSTWEKP 29
Score = 34.7 bits (80), Expect = 0.001
Identities = 10/26 (38%), Positives = 18/26 (69%)
Query: 515 WELRRDPRGRVYYVDHNTRSTTWQRP 540
W+ +D GR+YY + T+ +TW++P
Sbjct: 4 WKEAKDASGRIYYYNTLTKKSTWEKP 29
Score = 31.6 bits (72), Expect = 0.021
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 378 WEIRQDTYGRRYYVDHNTRSSSWERP 403
W+ +D GR YY + T+ S+WE+P
Sbjct: 4 WKEAKDASGRIYYYNTLTKKSTWEKP 29
Score = 30.1 bits (68), Expect = 0.075
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 491 GRRYYVDHNTRSSSWERP 508
GR YY + T+ S+WE+P
Sbjct: 12 GRIYYYNTLTKKSTWEKP 29
Score = 24.7 bits (54), Expect = 6.0
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 647 WEIRYTEDGTRYFVDHNTRSTTFEDP 672
W+ G Y+ + T+ +T+E P
Sbjct: 4 WKEAKDASGRIYYYNTLTKKSTWEKP 29
>d2cm5a1 b.7.1.2 (A:541-677) C2b-domain of rabphilin {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 137
Score = 37.9 bits (87), Expect = 0.001
Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 149 KPNPYIELYV----DYKNPKTTRVVKNTYQPKWNEEFTVLVSPYSIILFRLL----DHRT 200
+P+++L++ K T++ K T P++NEEF + + L D+
Sbjct: 35 YSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDYDI 94
Query: 201 FRRDCTIGEKRLN 213
+ + IG +L
Sbjct: 95 GKSNDYIGGCQLG 107
Score = 31.7 bits (71), Expect = 0.19
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 111 IYRHYTRNSKQTTRVVKNTYQPKWNEEFT 139
+ + +K T++ K T P++NEEF
Sbjct: 44 LKPDMGKKAKHKTQIKKKTLNPEFNEEFF 72
>d2dk1a1 b.72.1.1 (A:7-44) WW domain-binding protein 4, WBP4 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 32.9 bits (75), Expect = 0.009
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 410 WELRRDPRGRVYYVDHNTRSTTWQRP 435
W G YY D + ++ W++P
Sbjct: 3 WVEGITSEGYHYYYDLISGASQWEKP 28
Score = 32.9 bits (75), Expect = 0.009
Identities = 7/26 (26%), Positives = 12/26 (46%)
Query: 515 WELRRDPRGRVYYVDHNTRSTTWQRP 540
W G YY D + ++ W++P
Sbjct: 3 WVEGITSEGYHYYYDLISGASQWEKP 28
Score = 31.7 bits (72), Expect = 0.019
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 378 WEIRQDTYGRRYYVDHNTRSSSWERPQPL 406
W + G YY D + +S WE+P+
Sbjct: 3 WVEGITSEGYHYYYDLISGASQWEKPEGF 31
Score = 31.7 bits (72), Expect = 0.021
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 601 WERRVQPDGRVYFVNHKNRTTQWEDP 626
W + +G Y+ + + +QWE P
Sbjct: 3 WVEGITSEGYHYYYDLISGASQWEKP 28
Score = 29.8 bits (67), Expect = 0.093
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 491 GRRYYVDHNTRSSSWERPQPL 511
G YY D + +S WE+P+
Sbjct: 11 GYHYYYDLISGASQWEKPEGF 31
Score = 24.8 bits (54), Expect = 7.1
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 647 WEIRYTEDGTRYFVDHNTRSTTFEDP 672
W T +G Y+ D + ++ +E P
Sbjct: 3 WVEGITSEGYHYYYDLISGASQWEKP 28
>d1eg3a3 b.72.1.1 (A:47-84) Dystrophin {Human (Homo sapiens) [TaxId:
9606]}
Length = 38
Score = 32.6 bits (74), Expect = 0.011
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 595 GSLPSGWERRVQPDGRVYFVNHKNRTTQWE 624
S+ WER + P+ Y++NH+ +TT W+
Sbjct: 9 TSVQGPWERAISPNKVPYYINHETQTTCWD 38
>d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus
[TaxId: 1280]}
Length = 319
Score = 34.7 bits (78), Expect = 0.047
Identities = 26/254 (10%), Positives = 62/254 (24%), Gaps = 18/254 (7%)
Query: 415 DPRGRVYYVDHNTRSTTWQRPNSERLQHFKHWQGERAHVVSQGSQRFLYPQHGVGVSSSS 474
D +G+++ +D + P ++ ++ + L+ + S+
Sbjct: 48 DRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTG 107
Query: 475 AVSF---STGVTEEDADTYGRRYYVDHNTRSSSWERPQPLPPGWELRRDPRGRVYYVDHN 531
+ + ++ + Y +D S G+ D
Sbjct: 108 GIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR 167
Query: 532 TRSTTWQRPNSERLQHFKHWQGERAHVVSQGSQRFLYPQHGVGVSSSSAVSFSTGVTEED 591
T + Q + + + ++ GV+
Sbjct: 168 TVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPF------GATIP 221
Query: 592 DALGSLPSGWERRVQPDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEPPLPPGWEIRY 651
+ D +Y + + +G IGQI P G +R
Sbjct: 222 YYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK--RGYPIGQI--LIPGRDEGHMLRS 277
Query: 652 T-----EDGTRYFV 660
T + +
Sbjct: 278 THPQFIPGTNQLII 291
Score = 27.7 bits (60), Expect = 7.4
Identities = 9/62 (14%), Positives = 22/62 (35%), Gaps = 4/62 (6%)
Query: 607 PDGRVYFVNHKNRTTQWEDPRTQGQEIGQIGADEPPLPPGWEIRYTEDGTRYFVDHNTRS 666
G+++ ++ +P + +EI + P I+ +DG +
Sbjct: 49 RQGQLFLLDVFEGNIFKINP--ETKEIKRPFVSHKANPAA--IKIHKDGRLFVCYLGDFK 104
Query: 667 TT 668
+T
Sbjct: 105 ST 106
>d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 122
Score = 32.6 bits (74), Expect = 0.074
Identities = 18/89 (20%), Positives = 31/89 (34%), Gaps = 7/89 (7%)
Query: 140 VGGQGGGLLKPNPYIELYV-----DYKNPKTTRVV--KNTYQPKWNEEFTVLVSPYSIIL 192
+ GQ Y+E+ + D K T++ N+ P W EE V L
Sbjct: 8 ISGQFLSERSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPEL 67
Query: 193 FRLLDHRTFRRDCTIGEKRLNIYGVLAHY 221
L + +G + + I + + Y
Sbjct: 68 ASLRVAVMEEGNKFLGHRIIPINALNSGY 96
>d2ho2a1 b.72.1.1 (A:253-285) Amyloid beta A4 precursor
protein-binding family B member 1, APBB1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 29.5 bits (66), Expect = 0.10
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 406 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 435
LP GW +D G YY T +T W+ P
Sbjct: 3 LPAGWMRVQDTSG-TYYWHIPTGTTQWEPP 31
Score = 29.5 bits (66), Expect = 0.10
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Query: 511 LPPGWELRRDPRGRVYYVDHNTRSTTWQRP 540
LP GW +D G YY T +T W+ P
Sbjct: 3 LPAGWMRVQDTSG-TYYWHIPTGTTQWEPP 31
Score = 27.6 bits (61), Expect = 0.70
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 597 LPSGWERRVQPDGRVYFVNHKNRTTQWEDP 626
LP+GW R G Y+ + TTQWE P
Sbjct: 3 LPAGWMRVQDTSG-TYYWHIPTGTTQWEPP 31
Score = 26.8 bits (59), Expect = 0.97
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Query: 374 LPPGWEIRQDTYGRRYYVDHNTRSSSWERP 403
LP GW QDT G YY T ++ WE P
Sbjct: 3 LPAGWMRVQDTSG-TYYWHIPTGTTQWEPP 31
>d1wfma_ b.7.1.2 (A:) Synaptotagmin XIII {Human (Homo sapiens)
[TaxId: 9606]}
Length = 138
Score = 30.3 bits (67), Expect = 0.48
Identities = 14/73 (19%), Positives = 24/73 (32%), Gaps = 7/73 (9%)
Query: 149 KPNPYIELYV---DYKNPKTTRVVKNTYQPKWNEEFTVLVS----PYSIILFRLLDHRTF 201
+ Y++ V T + K W E + ++ P + + L F
Sbjct: 43 GCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCDRF 102
Query: 202 RRDCTIGEKRLNI 214
R GE RL +
Sbjct: 103 SRHSVAGELRLGL 115
>d1dqva1 b.7.1.2 (A:295-424) Synaptotagmin III {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 130
Score = 30.3 bits (67), Expect = 0.49
Identities = 18/71 (25%), Positives = 26/71 (36%), Gaps = 4/71 (5%)
Query: 161 KNPKTTRVVKNTYQPKWNEEFTVLVSPYSI----ILFRLLDHRTFRRDCTIGEKRLNIYG 216
K T+V + T P +NE F V + + F + D F R IG+ L+
Sbjct: 52 KKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLL 111
Query: 217 VLAHYNGKCEH 227
LA
Sbjct: 112 ELAEQPPDRPL 122
>d1nhpa3 d.87.1.1 (A:322-447) NADH peroxidase {Enterococcus faecalis
[TaxId: 1351]}
Length = 126
Score = 29.9 bits (67), Expect = 0.65
Identities = 11/53 (20%), Positives = 16/53 (30%), Gaps = 6/53 (11%)
Query: 469 GVSSSSAVSF------STGVTEEDADTYGRRYYVDHNTRSSSWERPQPLPPGW 515
GV SS ++ STG+ E A G+ + W
Sbjct: 1 GVQGSSGLAVFDYKFASTGINEVMAQKLGKETKAVTVVEDYLMDFNPDKQKAW 53
>d1c8da_ b.121.5.2 (A:) Parvovirus (panleukopenia virus) capsid
protein {Canine parvovirus [TaxId: 10788]}
Length = 548
Score = 29.9 bits (67), Expect = 1.9
Identities = 29/272 (10%), Positives = 70/272 (25%), Gaps = 42/272 (15%)
Query: 358 AAQSNGLPPALPPEEPLPPGWEIRQDTYGRRYYVDHNTRSSSWERPQPLPPGWELRRDPR 417
AA + P + +P R R + +T +S +
Sbjct: 152 AAMRSETLGFYPWKPTIPT--PWRYYFQWDRTLIPSHTGTS-----GTPTNIYHGTDPDD 204
Query: 418 GRVYYVDH----------NTRSTTWQRPNSERLQHFKHWQGERAHVVSQGSQRFLYPQHG 467
+ Y +++ + +T + + + WQ RA + +
Sbjct: 205 VQFYTIENSVPVHLLRTGDEFATGTFFFDCKPCRLTHTWQTNRALGLPPFLNSLPQSE-- 262
Query: 468 VGVSSSSAVSFSTGVTEEDADTYGRRYYVDHNTRSSSWERPQPLPPGWELRRDPRGRVYY 527
D + ++++ + P Y
Sbjct: 263 ------------GDTNFGDIGVQQDKRRGVTQMGNTNY-ITEA------TIMRPAEVGYS 303
Query: 528 VDHNTRSTTWQRPNSERLQHFKHWQGERAHVVSQGSQRFLY-PQHGVGVSSSSAVSFSTG 586
+ + + Q P + + + + G+ R+ + QHG ++++ +
Sbjct: 304 APYYSFEASTQGPFKTPIAAGRGGAQTDENQAADGNPRYAFGRQHG-QKTTTTGETPERF 362
Query: 587 VTEEDDALGSLPSGWERRVQPDGRVYFVNHKN 618
G P +Q V + N
Sbjct: 363 TYIAHQDTGRYP--EGDWIQNINFNLPVTNDN 392
>d1ftra1 d.58.33.1 (A:1-148)
Formylmethanofuran:tetrahydromethanopterin
formyltransferase {Archaeon Methanopyrus kandleri
[TaxId: 2320]}
Length = 148
Score = 27.4 bits (61), Expect = 4.7
Identities = 9/46 (19%), Positives = 19/46 (41%), Gaps = 10/46 (21%)
Query: 354 TSPRAAQSNGLPPALPPEEPLP---------PGWEIRQDTYGRRYY 390
T+P A+ + +P A E+ G++ + GR+ +
Sbjct: 99 TAPTASAFDAMPEA-EKEDEDRVGYKLSFFGDGYQEEDELDGRKVW 143
>d1m7xa1 b.1.18.2 (A:117-226) 1,4-alpha-glucan branching enzyme,
N-terminal domain N {Escherichia coli [TaxId: 562]}
Length = 110
Score = 26.8 bits (59), Expect = 5.1
Identities = 13/70 (18%), Positives = 20/70 (28%), Gaps = 3/70 (4%)
Query: 443 FKHWQGERAHVV---SQGSQRFLYPQHGVGVSSSSAVSFSTGVTEEDADTYGRRYYVDHN 499
F +W G R + G P G + + G +D Y +
Sbjct: 40 FNYWDGRRHPMRLRKESGIWELFIPGAHNGQLYKYEMIDANGNLRLKSDPYAFEAQMRPE 99
Query: 500 TRSSSWERPQ 509
T S P+
Sbjct: 100 TASLICGLPE 109
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter
MsbA, C-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 253
Score = 27.5 bits (61), Expect = 7.5
Identities = 13/74 (17%), Positives = 23/74 (31%), Gaps = 1/74 (1%)
Query: 908 GSG-SSCERAIVRREPVCFSSLPGHAVFPWEDLPNSWRFCIEKVGKDTWLPRSHTCFNRL 966
GSG S+ I R + + E S R + V ++ L N
Sbjct: 51 GSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVANNIA 110
Query: 967 DLPPYKSYDQMVEK 980
+ + +E+
Sbjct: 111 YARTEEYSREQIEE 124
>d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain
{Methylobacterium extorquens [TaxId: 408]}
Length = 596
Score = 28.0 bits (61), Expect = 7.6
Identities = 12/78 (15%), Positives = 21/78 (26%), Gaps = 3/78 (3%)
Query: 362 NGLPPALPPEEPL--PPGWEIRQDTYGRRY-YVDHNTRSSSWERPQPLPPGWELRRDPRG 418
N + P+ L I D Y + P P G + G
Sbjct: 394 NQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLG 453
Query: 419 RVYYVDHNTRSTTWQRPN 436
++ + T W++
Sbjct: 454 QIKAYNAITGDYKWEKME 471
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.135 0.428
Gapped
Lambda K H
0.267 0.0601 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 4,083,771
Number of extensions: 207389
Number of successful extensions: 650
Number of sequences better than 10.0: 1
Number of HSP's gapped: 636
Number of HSP's successfully gapped: 105
Length of query: 994
Length of database: 2,407,596
Length adjustment: 94
Effective length of query: 900
Effective length of database: 1,116,976
Effective search space: 1005278400
Effective search space used: 1005278400
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.4 bits)