Query psy16330
Match_columns 101
No_of_seqs 113 out of 1165
Neff 10.4
Searched_HMMs 29240
Date Fri Aug 16 18:40:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16330.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16330hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z0u_A WW domain-containing pr 99.9 2.7E-22 9.3E-27 116.6 8.0 95 3-100 34-138 (155)
2 1wfm_A Synaptotagmin XIII; C2 99.9 3.9E-21 1.3E-25 109.6 10.8 94 2-100 16-116 (138)
3 3f04_A Synaptotagmin-1; C2A, c 99.9 4.3E-21 1.5E-25 109.9 10.6 95 3-100 25-126 (143)
4 1rsy_A Synaptotagmin I; calciu 99.9 6.4E-21 2.2E-25 110.3 11.3 95 3-100 33-134 (152)
5 2fk9_A Protein kinase C, ETA t 99.9 2.4E-21 8.1E-26 112.7 9.2 93 8-100 25-125 (157)
6 2ep6_A MCTP2 protein; beta san 99.9 1E-21 3.6E-26 111.3 7.4 92 5-100 6-99 (133)
7 2cm5_A Rabphilin-3A; protein t 99.9 8.9E-21 3.1E-25 111.1 11.4 95 3-100 28-131 (166)
8 2d8k_A Synaptotagmin VII; exoc 99.9 1.4E-20 4.8E-25 107.6 11.6 95 3-100 17-119 (141)
9 1ugk_A Synaptotagmin IV, KIAA1 99.9 6.3E-21 2.1E-25 108.7 10.1 96 3-101 13-117 (138)
10 2b3r_A Phosphatidylinositol-4- 99.9 2.3E-20 7.9E-25 106.0 12.1 92 5-100 13-114 (134)
11 2chd_A Rabphilin-3A, exophilin 99.9 3.9E-21 1.3E-25 109.9 8.9 95 3-100 20-124 (142)
12 3n5a_A Synaptotagmin-7; calciu 99.9 5.4E-21 1.8E-25 108.7 9.2 95 3-100 7-110 (138)
13 2nq3_A Itchy homolog E3 ubiqui 99.9 2.2E-20 7.5E-25 110.2 12.0 88 9-100 33-121 (173)
14 1w15_A Synaptotagmin IV; metal 99.9 8.3E-21 2.9E-25 109.8 10.0 95 3-100 21-124 (153)
15 3pyc_A E3 ubiquitin-protein li 99.9 1.3E-20 4.4E-25 106.7 10.4 88 10-100 3-95 (132)
16 1tjx_A Similar to synaptotagmi 99.8 1.5E-20 5E-25 109.4 10.4 95 3-100 16-119 (159)
17 2bwq_A Regulating synaptic mem 99.8 9.8E-21 3.3E-25 106.6 9.3 95 3-100 9-115 (129)
18 3kwu_A MUNC13-1; calcium bindi 99.8 4.2E-20 1.4E-24 106.3 11.6 87 10-100 15-114 (148)
19 2enp_A B/K protein; C2 type 1, 99.8 1.2E-20 4.3E-25 108.4 9.2 99 2-100 16-125 (147)
20 3rdl_A Protein kinase C alpha 99.8 2.6E-20 8.8E-25 105.8 10.3 92 4-100 10-109 (137)
21 2dmh_A Myoferlin; beta-sandwic 99.8 4.3E-20 1.5E-24 105.3 11.3 87 9-100 4-96 (140)
22 2dmg_A KIAA1228 protein; beta- 99.8 4.8E-20 1.6E-24 105.4 11.1 94 3-100 15-119 (142)
23 3fbk_A RGS3, RGP3, regulator o 99.8 7.9E-20 2.7E-24 105.8 11.8 94 3-100 18-120 (153)
24 1gmi_A Protein kinase C, epsil 99.8 7.8E-21 2.7E-25 108.1 7.4 87 11-100 5-103 (136)
25 3b7y_A E3 ubiquitin-protein li 99.8 3.3E-20 1.1E-24 107.2 10.1 90 8-100 16-112 (153)
26 1wfj_A Putative elicitor-respo 99.8 5.4E-20 1.8E-24 104.5 10.8 89 8-100 6-97 (136)
27 3fdw_A Synaptotagmin-like prot 99.8 1.8E-20 6.2E-25 107.9 8.4 95 3-100 14-118 (148)
28 1a25_A CALB, protein kinase C 99.8 7.2E-20 2.5E-24 105.5 10.9 87 11-100 30-124 (149)
29 3m7f_B E3 ubiquitin-protein li 99.8 6.6E-20 2.3E-24 108.3 10.8 91 7-100 3-100 (176)
30 1v27_A Regulating synaptic mem 99.8 1.9E-20 6.5E-25 106.8 7.9 95 3-100 12-118 (141)
31 1rh8_A Piccolo protein; beta-s 99.8 2.5E-20 8.4E-25 106.6 7.2 91 5-100 13-122 (142)
32 2q3x_A Regulating synaptic mem 99.8 3.8E-20 1.3E-24 109.0 8.1 92 4-100 24-123 (171)
33 1rlw_A Phospholipase A2, CALB 99.8 6.2E-20 2.1E-24 103.0 8.3 89 11-100 2-95 (126)
34 2r83_A Synaptotagmin-1; C2A-C2 99.8 1.3E-18 4.6E-23 109.0 12.2 96 2-100 9-111 (284)
35 1dqv_A Synaptotagmin III; beta 99.8 1.8E-18 6E-23 109.3 10.7 93 3-98 11-110 (296)
36 2cjt_A UNC-13 homolog A, MUNC1 99.8 2.7E-18 9.2E-23 97.2 10.0 81 11-100 4-86 (131)
37 2r83_A Synaptotagmin-1; C2A-C2 99.8 8.5E-18 2.9E-22 105.4 10.6 94 4-100 142-244 (284)
38 3nsj_A Perforin-1; pore formin 99.8 7E-18 2.4E-22 113.7 10.2 86 10-100 392-481 (540)
39 2cjs_A UNC-13 homolog A, MUNC1 99.8 1.6E-17 5.5E-22 97.5 10.3 81 11-100 13-95 (167)
40 3jzy_A Intersectin 2; C2 domai 99.7 2.9E-17 9.8E-22 109.9 11.9 87 10-100 385-474 (510)
41 1dqv_A Synaptotagmin III; beta 99.7 6.7E-18 2.3E-22 106.6 4.5 94 4-100 144-246 (296)
42 1djx_A PLC-D1, phosphoinositid 99.7 1.2E-15 4E-20 104.6 10.8 88 10-100 495-592 (624)
43 3l9b_A Otoferlin; C2-domain, b 99.7 1.5E-15 5.2E-20 86.2 9.2 81 11-100 20-106 (144)
44 1cjy_A CPLA2, protein (cytosol 99.6 5.6E-16 1.9E-20 107.5 7.8 90 10-100 16-110 (749)
45 3pfq_A PKC-B, PKC-beta, protei 99.6 1.2E-14 4E-19 100.4 9.6 89 9-100 169-265 (674)
46 3bxj_A RAS GTPase-activating p 99.4 6.4E-15 2.2E-19 98.5 -0.9 84 9-100 8-100 (483)
47 3ohm_B 1-phosphatidylinositol- 99.4 2.8E-12 9.7E-17 90.5 9.5 78 12-100 725-813 (885)
48 3qr0_A Phospholipase C-beta (P 99.4 4.7E-12 1.6E-16 88.9 9.8 78 12-100 650-739 (816)
49 2zkm_X 1-phosphatidylinositol- 99.3 1.1E-11 3.8E-16 87.0 9.4 79 11-100 677-767 (799)
50 1yrk_A NPKC-delta, protein kin 98.8 9E-08 3.1E-12 53.1 9.2 83 12-100 6-92 (126)
51 2enj_A NPKC-theta, protein kin 98.7 1.2E-07 4.2E-12 53.2 8.3 85 11-100 9-97 (138)
52 3l4c_A Dedicator of cytokinesi 96.6 0.046 1.6E-06 33.2 12.5 53 48-100 78-138 (220)
53 3hhm_A Phosphatidylinositol-4, 95.1 0.62 2.1E-05 34.7 11.2 85 11-100 354-453 (1091)
54 2wxf_A Phosphatidylinositol-4, 95.0 0.43 1.5E-05 34.9 10.2 84 11-100 216-322 (940)
55 1e7u_A Phosphatidylinositol 3- 93.7 1 3.4E-05 33.2 9.7 86 12-100 218-328 (961)
56 2y3a_A Phosphatidylinositol-4, 89.2 1.5 5E-05 32.8 6.6 66 12-83 353-429 (1092)
57 2yrb_A Protein fantom; beta sa 73.3 10 0.00035 21.7 4.8 90 8-100 14-114 (156)
No 1
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.87 E-value=2.7e-22 Score=116.56 Aligned_cols=95 Identities=15% Similarity=0.033 Sum_probs=81.9
Q ss_pred eecccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECC---c--CceeeeeecCCCCCeeceEEEEEeC----C
Q psy16330 3 LLQDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDY---K--NPKTTRVVKNTYQPKWNEEFTVLVS----P 72 (101)
Q Consensus 3 ~~~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~---~--~~~~T~~~~~~~~P~w~e~~~~~~~----~ 72 (101)
+...|....+.|.|.|.+| +|+. .+..+.+||||++++.. . .+++|+++++++||.|||+|.|.+. .
T Consensus 34 ~sl~y~~~~~~L~V~Vi~a~~L~~---~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~ 110 (155)
T 2z0u_A 34 IALKYDEKNKQFAILIIQLSNLSA---LLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALH 110 (155)
T ss_dssp EEEEEETTTTEEEEEEEEEECGGG---TCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHH
T ss_pred EEEEEcCCCCEEEEEEEEccCcCC---cccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhC
Confidence 4457888899999999999 6877 35668899999999854 2 2589999999999999999999987 2
Q ss_pred CCEEEEEEEeCCCCCCCCeeEEEEEECC
Q psy16330 73 YSIILFRLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 73 ~~~l~~~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
...|.|+|||++.++++++||++.++|+
T Consensus 111 ~~~L~~~V~d~d~~~~~d~iG~~~i~l~ 138 (155)
T 2z0u_A 111 QKTLRVDVCTTDRSHLEECLGGAQISLA 138 (155)
T ss_dssp HCEEEEEEEEECTTSCEEEEEEEEEECT
T ss_pred cCEEEEEEEECCCCCCCcEEEEEEEEHH
Confidence 5689999999999999999999999986
No 2
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.87 E-value=3.9e-21 Score=109.65 Aligned_cols=94 Identities=18% Similarity=0.165 Sum_probs=79.6
Q ss_pred ceecccccccceEEEEEEeeEeCCCCCCCCCCCCCcEEEEEEC---CcCceeeeeecCCCCCeeceEEEEEeCC----CC
Q psy16330 2 FLLQDYFSSVLQLLQLVECAHLRRGGQGGGLLKPNPYIELYVD---YKNPKTTRVVKNTYQPKWNEEFTVLVSP----YS 74 (101)
Q Consensus 2 ~~~~~y~~~~~~l~v~i~~a~l~~~~~~~~~~~~dpy~~v~~~---~~~~~~T~~~~~~~~P~w~e~~~~~~~~----~~ 74 (101)
.+...|....++|.|+|.+|. . .+..+.+||||++.+. +..+++|+++++++||.|+|+|.|.+.. ..
T Consensus 16 ~~sl~y~~~~~~L~V~v~~a~--~---~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~ 90 (138)
T 1wfm_A 16 HYCLDYDCQKAELFVTRLEAV--T---SNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTA 90 (138)
T ss_dssp EEEEEEETTTTEEEEEEEEEE--C---CCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTC
T ss_pred EEEEEEeCCCCEEEEEEEEEE--c---CCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCC
Confidence 345678889999999999996 2 3456789999999873 3335899999999999999999999862 45
Q ss_pred EEEEEEEeCCCCCCCCeeEEEEEECC
Q psy16330 75 IILFRLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 75 ~l~~~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
.|.|+|||++.++++++||++.++|.
T Consensus 91 ~L~~~V~d~d~~~~dd~lG~~~i~l~ 116 (138)
T 1wfm_A 91 TLTLTLRTCDRFSRHSVAGELRLGLD 116 (138)
T ss_dssp EEEEEEEECCSSCTTSCSEEEEEESS
T ss_pred EEEEEEEECCCCCCCcEEEEEEEEcc
Confidence 89999999999999999999999986
No 3
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.86 E-value=4.3e-21 Score=109.87 Aligned_cols=95 Identities=25% Similarity=0.291 Sum_probs=81.1
Q ss_pred eecccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEEC--CcCceeeeeecCCCCCeeceEEEEEeC----CCCE
Q psy16330 3 LLQDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVD--YKNPKTTRVVKNTYQPKWNEEFTVLVS----PYSI 75 (101)
Q Consensus 3 ~~~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~--~~~~~~T~~~~~~~~P~w~e~~~~~~~----~~~~ 75 (101)
+...|....+.|.|+|.+| +|+. .+..+.+||||++.+. +..+++|++++++.||.|+|+|.|.+. ....
T Consensus 25 ~~l~y~~~~~~L~v~v~~a~~L~~---~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 101 (143)
T 3f04_A 25 YSLDYDFQNNQLLVGIIQAAELPA---LDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKT 101 (143)
T ss_dssp EEEEEETTTTEEEEEEEEEECCCC---BGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCE
T ss_pred EEEEEeCCCCEEEEEEEEecCCCC---CCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCE
Confidence 4557888999999999999 6876 3445789999999883 334689999999999999999999886 3479
Q ss_pred EEEEEEeCCCCCCCCeeEEEEEECC
Q psy16330 76 ILFRLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 76 l~~~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
|.|+|||++.++++++||++.++|.
T Consensus 102 L~i~V~d~d~~~~~~~iG~~~i~l~ 126 (143)
T 3f04_A 102 LVMAVYDFDRFSKHDIIGEFKVPMN 126 (143)
T ss_dssp EEEEEEECCSSSCCEEEEEEEEEGG
T ss_pred EEEEEEeCCCCCCCceEEEEEEEHH
Confidence 9999999999999999999999885
No 4
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.86 E-value=6.4e-21 Score=110.25 Aligned_cols=95 Identities=25% Similarity=0.291 Sum_probs=81.3
Q ss_pred eecccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEEC--CcCceeeeeecCCCCCeeceEEEEEeC----CCCE
Q psy16330 3 LLQDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVD--YKNPKTTRVVKNTYQPKWNEEFTVLVS----PYSI 75 (101)
Q Consensus 3 ~~~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~--~~~~~~T~~~~~~~~P~w~e~~~~~~~----~~~~ 75 (101)
+...|....+.|.|+|.+| +|+. .+..+.+||||++.+. +..+++|++++++.||.|+|.|.|.+. ....
T Consensus 33 ~~l~y~~~~~~L~V~v~~a~~L~~---~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 109 (152)
T 1rsy_A 33 YSLDYDFQNNQLLVGIIQAAELPA---LDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKT 109 (152)
T ss_dssp EEEEEETTTTEEEEEEEEEESCCC---CSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCE
T ss_pred EEEEEeCCCCEEEEEEEEeECCCC---ccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCE
Confidence 4456888899999999999 6876 3556789999999884 334689999999999999999999886 3579
Q ss_pred EEEEEEeCCCCCCCCeeEEEEEECC
Q psy16330 76 ILFRLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 76 l~~~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
|.|+|||++.++++++||++.+++.
T Consensus 110 L~i~V~d~d~~~~~~~iG~~~i~l~ 134 (152)
T 1rsy_A 110 LVMAVYDFDRFSKHDIIGEFKVPMN 134 (152)
T ss_dssp EEEEEEECCSSSCCEEEEEEEEEGG
T ss_pred EEEEEEECCCCCCCcEEEEEEEEch
Confidence 9999999999989999999999875
No 5
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.86 E-value=2.4e-21 Score=112.70 Aligned_cols=93 Identities=19% Similarity=0.181 Sum_probs=76.5
Q ss_pred ccccceEEEEEEee-EeCCCCCC-------CCCCCCCcEEEEEECCcCceeeeeecCCCCCeeceEEEEEeCCCCEEEEE
Q psy16330 8 FSSVLQLLQLVECA-HLRRGGQG-------GGLLKPNPYIELYVDYKNPKTTRVVKNTYQPKWNEEFTVLVSPYSIILFR 79 (101)
Q Consensus 8 ~~~~~~l~v~i~~a-~l~~~~~~-------~~~~~~dpy~~v~~~~~~~~~T~~~~~~~~P~w~e~~~~~~~~~~~l~~~ 79 (101)
....+.|.|+|.+| +|+..... ...+.+||||.+.+++....+|+++++++||.|||+|.|.+.....|.|+
T Consensus 25 ~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~~~~L~~~ 104 (157)
T 2fk9_A 25 MKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTDGGHLELA 104 (157)
T ss_dssp CCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEECEEEEE
T ss_pred ccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCCCCEEEEE
Confidence 34567899999999 68752100 01256899999999877557999999999999999999998866799999
Q ss_pred EEeCCCCCCCCeeEEEEEECC
Q psy16330 80 LLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 80 v~~~~~~~~~~~iG~~~~~l~ 100 (101)
|||++.+++|++||.+.++++
T Consensus 105 V~D~d~~~~dd~iG~~~i~l~ 125 (157)
T 2fk9_A 105 VFHETPLGYDHFVANCTLQFQ 125 (157)
T ss_dssp EEECCSSSSCEEEEEEEEEHH
T ss_pred EEECCCCCCCCEEEEEEEEHH
Confidence 999999999999999999874
No 6
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.86 E-value=1e-21 Score=111.28 Aligned_cols=92 Identities=18% Similarity=0.168 Sum_probs=81.7
Q ss_pred cccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECCcCceeeeeecCCCCCeeceEEEEEeC-CCCEEEEEEEe
Q psy16330 5 QDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDYKNPKTTRVVKNTYQPKWNEEFTVLVS-PYSIILFRLLD 82 (101)
Q Consensus 5 ~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~~~~~~T~~~~~~~~P~w~e~~~~~~~-~~~~l~~~v~~ 82 (101)
.+|....+.|.|+|.+| +|+. .+..+.+||||.+.+++. +++|++++++.+|.|+|+|.|.+. ....|.|+|||
T Consensus 6 ~~~~~~~~~L~v~v~~a~~L~~---~d~~g~~dpyv~v~~~~~-~~kT~~~~~t~nP~wne~f~f~~~~~~~~l~i~V~d 81 (133)
T 2ep6_A 6 SGDVKDVGILQVKVLKAADLLA---ADFSGKSDPFCLLELGND-RLQTHTVYKNLNPEWNKVFTFPIKDIHDVLEVTVFD 81 (133)
T ss_dssp CCSCCCSEEEEEEEEEEESCCC---SSSSSCCCEEEEEEETTE-EEECCCCSSCSSCCCCEEEEEEESCTTCEEEEEEEE
T ss_pred ccccCCceEEEEEEEeeECCCC---CCCCCCcCeEEEEEECCE-EEEeeeecCCCCCccccEEEEEecCCCCEEEEEEEE
Confidence 46888999999999999 6876 355678999999999887 589999999999999999999997 56789999999
Q ss_pred CCCCCCCCeeEEEEEECC
Q psy16330 83 HRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 83 ~~~~~~~~~iG~~~~~l~ 100 (101)
++..+++++||++.+++.
T Consensus 82 ~d~~~~~~~lG~~~i~l~ 99 (133)
T 2ep6_A 82 EDGDKPPDFLGKVAIPLL 99 (133)
T ss_dssp EETTEEEEECCBCEEEGG
T ss_pred CCCCCCCCeeEEEEEEHH
Confidence 999988999999999875
No 7
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.86 E-value=8.9e-21 Score=111.05 Aligned_cols=95 Identities=21% Similarity=0.233 Sum_probs=81.7
Q ss_pred eecccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECC----cCceeeeeecCCCCCeeceEEEEEeCC----C
Q psy16330 3 LLQDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDY----KNPKTTRVVKNTYQPKWNEEFTVLVSP----Y 73 (101)
Q Consensus 3 ~~~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~----~~~~~T~~~~~~~~P~w~e~~~~~~~~----~ 73 (101)
+...|.+..+.|.|+|.+| +|+. .+..+.+||||++++.+ ..+++|++++++.||.|+|.|.|.+.. .
T Consensus 28 ~~l~y~~~~~~L~V~v~~a~~L~~---~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~ 104 (166)
T 2cm5_A 28 VSLMYSTQQGGLIVGIIRCVHLAA---MDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAK 104 (166)
T ss_dssp EEEEEETTTTEEEEEEEEEESCCC---CSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGG
T ss_pred EEEEEECCCCEEEEEEEEeECCCC---ccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCC
Confidence 4467888899999999999 6876 35567899999998864 246899999999999999999999862 4
Q ss_pred CEEEEEEEeCCCCCCCCeeEEEEEECC
Q psy16330 74 SIILFRLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 74 ~~l~~~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
..|.|+|||++.++++++||++.+++.
T Consensus 105 ~~L~i~V~d~d~~~~~~~iG~~~i~l~ 131 (166)
T 2cm5_A 105 KSLDISVWDYDIGKSNDYIGGCQLGIS 131 (166)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEETT
T ss_pred CEEEEEEEECCCCCCCcEEEeEEEecc
Confidence 599999999999999999999999986
No 8
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=1.4e-20 Score=107.56 Aligned_cols=95 Identities=23% Similarity=0.333 Sum_probs=80.9
Q ss_pred eecccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEEC--CcCceeeeeecCCCCCeeceEEEEEe-C----CCC
Q psy16330 3 LLQDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVD--YKNPKTTRVVKNTYQPKWNEEFTVLV-S----PYS 74 (101)
Q Consensus 3 ~~~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~--~~~~~~T~~~~~~~~P~w~e~~~~~~-~----~~~ 74 (101)
+-..|....+.|.|+|.+| +|+. .+..+.+||||++.+. +..+++|++++++.||.|+|.|.|.+ + ...
T Consensus 17 ~~l~y~~~~~~L~v~v~~a~~L~~---~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~ 93 (141)
T 2d8k_A 17 FSVGYNFQESTLTVKIMKAQELPA---KDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQR 93 (141)
T ss_dssp EEEEECSSSCCEEEEEEEEESCCC---CSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTS
T ss_pred EEEEEeCCCCEEEEEEEEeECCCC---CCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccC
Confidence 4567888899999999999 6876 3556789999999984 33468999999999999999999985 3 357
Q ss_pred EEEEEEEeCCCCCCCCeeEEEEEECC
Q psy16330 75 IILFRLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 75 ~l~~~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
.|.|+|||++.++++++||++.+++.
T Consensus 94 ~l~i~V~d~d~~~~~~~iG~~~i~l~ 119 (141)
T 2d8k_A 94 ILYLQVLDYDRFSRNDPIGEVSIPLN 119 (141)
T ss_dssp EEEEEEEECCSSSSCEEEEEEEEETT
T ss_pred EEEEEEEECCCCCCCcEEEEEEEEhh
Confidence 89999999999989999999999986
No 9
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.86 E-value=6.3e-21 Score=108.66 Aligned_cols=96 Identities=25% Similarity=0.363 Sum_probs=80.7
Q ss_pred eecccccccceEEEEEEee-EeCCCCCCCCC-CCCCcEEEEEECC--cCceeeeeecCCCCCeeceEEEEE-eC----CC
Q psy16330 3 LLQDYFSSVLQLLQLVECA-HLRRGGQGGGL-LKPNPYIELYVDY--KNPKTTRVVKNTYQPKWNEEFTVL-VS----PY 73 (101)
Q Consensus 3 ~~~~y~~~~~~l~v~i~~a-~l~~~~~~~~~-~~~dpy~~v~~~~--~~~~~T~~~~~~~~P~w~e~~~~~-~~----~~ 73 (101)
+...|.+..+.|.|+|.+| +|+. .+.+ +.+||||++.+.. ..+++|++++++.||.|+|+|.|. +. ..
T Consensus 13 ~~l~y~~~~~~L~v~v~~a~~L~~---~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~ 89 (138)
T 1ugk_A 13 FSLEYNFERKAFVVNIKEARGLPA---MDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQE 89 (138)
T ss_dssp EEEEEEGGGTEEEEEEEEEESCCC---CBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGG
T ss_pred EEEEEECCCCEEEEEEEEeeCCCC---CCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhcc
Confidence 4567888999999999999 6876 3444 6789999998852 346899999999999999999995 65 23
Q ss_pred CEEEEEEEeCCCCCCCCeeEEEEEECCC
Q psy16330 74 SIILFRLLDHRTFRRDCTIGEKRLNTST 101 (101)
Q Consensus 74 ~~l~~~v~~~~~~~~~~~iG~~~~~l~~ 101 (101)
..|.|+|||++.++++++||++.++|..
T Consensus 90 ~~l~i~V~d~d~~~~~~~lG~~~i~l~~ 117 (138)
T 1ugk_A 90 LALHFTILSFDRFSRDDIIGEVLIPLSG 117 (138)
T ss_dssp CEEEEEEEEECSSCCCCCCEEEEEECTT
T ss_pred CEEEEEEEECCCCCCCcEEEEEEEehhH
Confidence 5899999999999999999999999863
No 10
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.86 E-value=2.3e-20 Score=105.99 Aligned_cols=92 Identities=20% Similarity=0.268 Sum_probs=77.6
Q ss_pred cccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEEC----CcCceeeeeecCCCCCeeceEEEEE-eC----CCC
Q psy16330 5 QDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVD----YKNPKTTRVVKNTYQPKWNEEFTVL-VS----PYS 74 (101)
Q Consensus 5 ~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~----~~~~~~T~~~~~~~~P~w~e~~~~~-~~----~~~ 74 (101)
..|....++|.|+|.+| +|+. +..+.+||||++++. +..+++|++++++.||.|+|+|.|. +. ...
T Consensus 13 ~~~~~~~~~L~V~V~~a~~L~~----~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~ 88 (134)
T 2b3r_A 13 LSVSYRNGTLFIMVMHIKDLVT----EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQR 88 (134)
T ss_dssp EEEEEETTEEEEEEEEEECCCC----TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTC
T ss_pred EEEeecCCEEEEEEEEeeCCCC----CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcC
Confidence 45666778999999999 6764 345789999999872 2335899999999999999999999 76 457
Q ss_pred EEEEEEEeCCCCCCCCeeEEEEEECC
Q psy16330 75 IILFRLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 75 ~l~~~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
.|.|+|||++.++++++||++.++|.
T Consensus 89 ~L~~~V~d~d~~~~~~~lG~~~i~l~ 114 (134)
T 2b3r_A 89 ELQLSVLSAESLRENFFLGGITLPLK 114 (134)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEEEGG
T ss_pred EEEEEEEECCCCCCCcEEEEEEEEhh
Confidence 99999999999999999999999875
No 11
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.85 E-value=3.9e-21 Score=109.94 Aligned_cols=95 Identities=22% Similarity=0.281 Sum_probs=80.7
Q ss_pred eecccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECC----cCceeeeeecCCCCCeeceEEEEE-eCC----
Q psy16330 3 LLQDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDY----KNPKTTRVVKNTYQPKWNEEFTVL-VSP---- 72 (101)
Q Consensus 3 ~~~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~----~~~~~T~~~~~~~~P~w~e~~~~~-~~~---- 72 (101)
+...|.+..++|.|+|.+| +|+. .+..+.+||||++.+.+ ..+++|++++++.+|.|+|.|.|. +..
T Consensus 20 ~~l~y~~~~~~L~V~v~~a~~L~~---~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~ 96 (142)
T 2chd_A 20 FSLLYDQDNSNLQCTIIRAKGLKP---MDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQ 96 (142)
T ss_dssp EEEEEEGGGTEEEEEEEEEESCCC---CCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHH
T ss_pred EEEEEeCCCCEEEEEEEEecCCCC---CCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHcc
Confidence 4567888899999999999 6877 35567899999999854 235899999999999999999998 541
Q ss_pred CCEEEEEEEeCCCCCCCCeeEEEEEECC
Q psy16330 73 YSIILFRLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 73 ~~~l~~~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
...|.|+|||++.++++++||++.++++
T Consensus 97 ~~~l~i~V~d~d~~~~d~~iG~~~i~l~ 124 (142)
T 2chd_A 97 RKTLRISVCDEDKFGHNEFIGETRFSLK 124 (142)
T ss_dssp HCEEEEEEEEECTTSCEEEEEEEEEEGG
T ss_pred CCEEEEEEEECCCCCCCcEEEEEEEEHH
Confidence 3689999999999989999999999975
No 12
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.85 E-value=5.4e-21 Score=108.69 Aligned_cols=95 Identities=23% Similarity=0.328 Sum_probs=80.6
Q ss_pred eecccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECCc----CceeeeeecCCCCCeeceEEEEEeCC----C
Q psy16330 3 LLQDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDYK----NPKTTRVVKNTYQPKWNEEFTVLVSP----Y 73 (101)
Q Consensus 3 ~~~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~~----~~~~T~~~~~~~~P~w~e~~~~~~~~----~ 73 (101)
+...|.+..++|.|.|.+| +|+. .+..+.+||||++++.+. .+++|++++++.||.|+|.|.|.+.. .
T Consensus 7 ~sl~y~~~~~~L~v~v~~a~~L~~---~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~ 83 (138)
T 3n5a_A 7 LSLCYNPSANSIIVNIIKARNLKA---MDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRE 83 (138)
T ss_dssp EEEEEETTTTEEEEEEEEEESCCC---CBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGG
T ss_pred EEEEEcCCCCeEEEEEEEeeCCCC---cCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCc
Confidence 4557888999999999999 6876 345678999999987532 25899999999999999999999872 2
Q ss_pred CEEEEEEEeCCCCCCCCeeEEEEEECC
Q psy16330 74 SIILFRLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 74 ~~l~~~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
..|.|+|||++.++++++||++.+++.
T Consensus 84 ~~l~~~V~d~~~~~~~~~lG~~~i~l~ 110 (138)
T 3n5a_A 84 TTIIITVMDKDKLSRNDVIGKIYLSWK 110 (138)
T ss_dssp EEEEEEEEECCSSSCCEEEEEEEESSS
T ss_pred eEEEEEEEECCCCCCCcEEEEEEEccc
Confidence 589999999999999999999999885
No 13
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.85 E-value=2.2e-20 Score=110.24 Aligned_cols=88 Identities=33% Similarity=0.519 Sum_probs=75.6
Q ss_pred cccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECCcCceeeeeecCCCCCeeceEEEEEeCCCCEEEEEEEeCCCCC
Q psy16330 9 SSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDYKNPKTTRVVKNTYQPKWNEEFTVLVSPYSIILFRLLDHRTFR 87 (101)
Q Consensus 9 ~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~~~~~~T~~~~~~~~P~w~e~~~~~~~~~~~l~~~v~~~~~~~ 87 (101)
...++|.|+|.+| +|+. ....+.+||||++.+++. +++|++++++.||.|+|.|.|.+.+...|.|+|||++.++
T Consensus 33 ~~~~~L~V~V~~A~~L~~---~~~~~~sDPYv~v~~~~~-~~kT~v~~~tlnP~Wne~f~f~v~~~~~L~~~V~D~d~~~ 108 (173)
T 2nq3_A 33 TMKSQLQITVISAKLKEN---KKNWFGPSPYVEVTVDGQ-SKKTEKCNNTNSPKWKQPLTVIVTPVSKLHFRVWSHQTLK 108 (173)
T ss_dssp SCCEEEEEEEEEEEECCC---C--CCCCCEEEEEEETTE-EEECCCCSSCSSCEEEEEEEEEECTTCEEEEEEEECCSSS
T ss_pred CCceEEEEEEEEeECCCC---cccCCCCCeEEEEEECCE-EeEccccCCCCCCeECCEEEEEeCCCCEEEEEEEECCCCC
Confidence 4567899999999 6873 234445999999999884 6999999999999999999999988889999999999999
Q ss_pred CCCeeEEEEEECC
Q psy16330 88 RDCTIGEKRLNTS 100 (101)
Q Consensus 88 ~~~~iG~~~~~l~ 100 (101)
+|++||++.+++.
T Consensus 109 ~dd~lG~~~i~l~ 121 (173)
T 2nq3_A 109 SDVLLGTAALDIY 121 (173)
T ss_dssp CCEEEEEEEEEHH
T ss_pred CCceEEEEEEEHH
Confidence 9999999999874
No 14
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.85 E-value=8.3e-21 Score=109.81 Aligned_cols=95 Identities=26% Similarity=0.249 Sum_probs=76.9
Q ss_pred eecccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEE--CCcC--ceeeeeecCCCCCeeceEEEEEeCC----C
Q psy16330 3 LLQDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYV--DYKN--PKTTRVVKNTYQPKWNEEFTVLVSP----Y 73 (101)
Q Consensus 3 ~~~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~--~~~~--~~~T~~~~~~~~P~w~e~~~~~~~~----~ 73 (101)
+...|.+..++|.|.|.+| +|+. .+..+.+||||++.+ ++.. +++|++++++.||.|+|+|.|.+.. .
T Consensus 21 ~~l~y~~~~~~L~v~v~~a~~L~~---~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~ 97 (153)
T 1w15_A 21 VSLCYQSTTNTLTVVVLKARHLPK---SDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEE 97 (153)
T ss_dssp EEEEEETTTTEEEEEEEEEESCC---------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTT
T ss_pred EEEEEcCCCCEEEEEEEEeECCCC---cCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCc
Confidence 4567888899999999999 6876 355678899999987 3322 4799999999999999999999873 2
Q ss_pred CEEEEEEEeCCCCCCCCeeEEEEEECC
Q psy16330 74 SIILFRLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 74 ~~l~~~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
..|.|+|||++.++++++||++.++++
T Consensus 98 ~~l~v~V~d~d~~~~~~~lG~~~i~l~ 124 (153)
T 1w15_A 98 ISVEFLVLDSERGSRNEVIGRLVLGAT 124 (153)
T ss_dssp EEEEEEEEECCTTSCCEEEEEEEESTT
T ss_pred eEEEEEEEeCCCCCCCcEEEEEEECCC
Confidence 589999999999999999999999875
No 15
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.85 E-value=1.3e-20 Score=106.65 Aligned_cols=88 Identities=26% Similarity=0.474 Sum_probs=74.3
Q ss_pred ccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECC-cCceeeeeecCCCCCeeceEEEEEeCCCCEEEEEEEeCCCCC
Q psy16330 10 SVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDY-KNPKTTRVVKNTYQPKWNEEFTVLVSPYSIILFRLLDHRTFR 87 (101)
Q Consensus 10 ~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~-~~~~~T~~~~~~~~P~w~e~~~~~~~~~~~l~~~v~~~~~~~ 87 (101)
...+|.|+|.+| +|+. .+..+.+||||.+.+++ ...++|++++++.||.|+|.|.|.+.....|.|+|||++.++
T Consensus 3 ~~~~L~V~v~~a~~L~~---~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~l~~~v~d~d~~~ 79 (132)
T 3pyc_A 3 EFIKIRLTVLCAKNLAK---KDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKTDSITISVWNHKKIH 79 (132)
T ss_dssp SEEEEEEEEEEEESCCC---CSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETTCCEEEEEEEGGGTT
T ss_pred CeEEEEEEEEEeECCCC---CCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCCCEEEEEEEECCCCC
Confidence 456789999999 6876 45668899999999875 346899999999999999999999875556999999999886
Q ss_pred C---CCeeEEEEEECC
Q psy16330 88 R---DCTIGEKRLNTS 100 (101)
Q Consensus 88 ~---~~~iG~~~~~l~ 100 (101)
+ |++||++.+++.
T Consensus 80 ~~~~d~~lG~~~i~l~ 95 (132)
T 3pyc_A 80 KKQGAGFLGCVRLLSN 95 (132)
T ss_dssp SSTTTTEEEEEEECHH
T ss_pred CCCCCCceEEEEEeHH
Confidence 5 789999999753
No 16
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.85 E-value=1.5e-20 Score=109.41 Aligned_cols=95 Identities=21% Similarity=0.283 Sum_probs=80.7
Q ss_pred eecccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECCc----CceeeeeecCCCCCeeceEEEEEeCC----C
Q psy16330 3 LLQDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDYK----NPKTTRVVKNTYQPKWNEEFTVLVSP----Y 73 (101)
Q Consensus 3 ~~~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~~----~~~~T~~~~~~~~P~w~e~~~~~~~~----~ 73 (101)
+-..|.+..++|.|+|.+| +|+. .+..+.+||||++++... .+++|++++++.||.|+|+|.|.+.. .
T Consensus 16 ~~l~y~~~~~~L~V~v~~a~~L~~---~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~ 92 (159)
T 1tjx_A 16 FSLRYVPTAGKLTVVILEAKNLKK---MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQK 92 (159)
T ss_dssp EEEEEETTTTEEEEEEEEEESCCC---CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGG
T ss_pred EEEEEcCCCCEEEEEEEEeeCCCC---ccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCC
Confidence 4557888899999999999 6876 355678999999987521 25899999999999999999999862 4
Q ss_pred CEEEEEEEeCCCCCCCCeeEEEEEECC
Q psy16330 74 SIILFRLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 74 ~~l~~~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
..|.|+|||++.++++++||++.+++.
T Consensus 93 ~~l~i~V~d~d~~~~~~~iG~~~i~l~ 119 (159)
T 1tjx_A 93 VQVVVTVLDYDKIGKNDAIGKVFVGYN 119 (159)
T ss_dssp CEEEEEEEECCSSSCCEEEEEEEEETT
T ss_pred cEEEEEEEECCCCCCCceEEEEEECCC
Confidence 589999999999999999999999985
No 17
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.85 E-value=9.8e-21 Score=106.63 Aligned_cols=95 Identities=25% Similarity=0.330 Sum_probs=75.7
Q ss_pred eecccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEEC----CcCceeeeeecCCCCCeeceEEEEEe-C----C
Q psy16330 3 LLQDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVD----YKNPKTTRVVKNTYQPKWNEEFTVLV-S----P 72 (101)
Q Consensus 3 ~~~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~----~~~~~~T~~~~~~~~P~w~e~~~~~~-~----~ 72 (101)
+...|.+..+.|.|+|.+| +|+. .+..+.+||||++.+. +..+++|++++++.||.|+|+|.|.+ . .
T Consensus 9 ~~l~y~~~~~~L~v~v~~a~~L~~---~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~ 85 (129)
T 2bwq_A 9 IKLWFDKVGHQLIVTILGAKDLPS---REDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFR 85 (129)
T ss_dssp EEEEEETTTTEEEEEEEEEESCCC---CTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGG
T ss_pred EEEEEccCCCEEEEEEEEeeCCCC---CCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhc
Confidence 4567888899999999999 6876 3556788999999872 23468999999999999999999985 3 2
Q ss_pred CCEEEEEEEeCCCCCC--CCeeEEEEEECC
Q psy16330 73 YSIILFRLLDHRTFRR--DCTIGEKRLNTS 100 (101)
Q Consensus 73 ~~~l~~~v~~~~~~~~--~~~iG~~~~~l~ 100 (101)
...|.|+|||++..++ +++||++.+++.
T Consensus 86 ~~~l~~~V~d~d~~~~~~~~~lG~~~i~l~ 115 (129)
T 2bwq_A 86 ERMLEITLWDQARVREEESEFLGEILIELE 115 (129)
T ss_dssp GCEEEEEEEEC-------CEEEEEEEEEGG
T ss_pred CCeEEEEEEECCcCcCcCCceeEEEEEEcc
Confidence 4699999999999876 899999999975
No 18
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.84 E-value=4.2e-20 Score=106.29 Aligned_cols=87 Identities=22% Similarity=0.339 Sum_probs=76.1
Q ss_pred ccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECCcCceeeeeecCCCCCeeceEEEEEeC-CCCEEEEEEEeCCCC-
Q psy16330 10 SVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDYKNPKTTRVVKNTYQPKWNEEFTVLVS-PYSIILFRLLDHRTF- 86 (101)
Q Consensus 10 ~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~~~~~~T~~~~~~~~P~w~e~~~~~~~-~~~~l~~~v~~~~~~- 86 (101)
..++|.|+|.+| +|+. .+..+.+||||.+.+++. +++|++++++.||.|+|.|.|.+. +...|.|+|||++..
T Consensus 15 ~~~~L~V~v~~a~~L~~---~d~~g~~dpyv~v~~~~~-~~kT~~~~~t~nP~Wne~f~f~v~~~~~~l~~~v~d~d~~~ 90 (148)
T 3kwu_A 15 WSAKISITVVCAQGLQA---KDKTGSSDPYVTVQVGKT-KKRTKTIYGNLNPVWEENFHFECHNSSDRIKVRVLDEDDDI 90 (148)
T ss_dssp CCEEEEEEEEEEESCCC---CSTTSCCCEEEEEEETTE-EEECCCCCSCSSCEEEEEEEEEECSTTCEEEEEEEECCCSH
T ss_pred cccEEEEEEEeeeCCCC---CCCCCCcCeEEEEEECCE-EEECCccCCCCCCCcccEEEEEecCCCCEEEEEEEECCCCc
Confidence 357899999999 6876 355688999999999776 589999999999999999999987 567999999999985
Q ss_pred ----------CCCCeeEEEEEECC
Q psy16330 87 ----------RRDCTIGEKRLNTS 100 (101)
Q Consensus 87 ----------~~~~~iG~~~~~l~ 100 (101)
+++++||++.++++
T Consensus 91 ~~~~~~~~~~~~~~~lG~~~i~l~ 114 (148)
T 3kwu_A 91 KSRVKQRFKRESDDFLGQTIIEVR 114 (148)
T ss_dssp HHHHHTTTSSCSSEEEEEEEEEGG
T ss_pred cccccccccCCCCccEEEEEEEHH
Confidence 78999999999985
No 19
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=1.2e-20 Score=108.44 Aligned_cols=99 Identities=24% Similarity=0.369 Sum_probs=80.9
Q ss_pred ceecccccccceEEEEEEee-EeCCC-CCC---CCCCCCCcEEEEEECC--cCceeeeeecCCCCCeeceEEEEEeC---
Q psy16330 2 FLLQDYFSSVLQLLQLVECA-HLRRG-GQG---GGLLKPNPYIELYVDY--KNPKTTRVVKNTYQPKWNEEFTVLVS--- 71 (101)
Q Consensus 2 ~~~~~y~~~~~~l~v~i~~a-~l~~~-~~~---~~~~~~dpy~~v~~~~--~~~~~T~~~~~~~~P~w~e~~~~~~~--- 71 (101)
.+...|.+..++|.|+|.+| +|+.. ... +..+.+||||++.+.. ..+++|++++++.||.|+|+|.|.+.
T Consensus 16 ~~~l~y~~~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~ 95 (147)
T 2enp_A 16 HFSTQYDLLHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLE 95 (147)
T ss_dssp EEEEEEETTTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHH
T ss_pred EEEEEEcCCCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHH
Confidence 34567889999999999999 68762 110 1235789999998752 34689999999999999999999886
Q ss_pred -CCCEEEEEEEeCCCCCCCCeeEEEEEECC
Q psy16330 72 -PYSIILFRLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 72 -~~~~l~~~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
....|.|+|||++.++++++||++.++|.
T Consensus 96 l~~~~L~~~V~d~d~~~~~~~iG~~~i~l~ 125 (147)
T 2enp_A 96 AQRRTLLLTVVDFDKFSRHCVIGKVSVPLC 125 (147)
T ss_dssp HHHSEEEEEEECCSTTCCSCCCEEEEEETT
T ss_pred hccCEEEEEEEECCCCcCCcEEEEEEEech
Confidence 24589999999999999999999999986
No 20
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.84 E-value=2.6e-20 Score=105.80 Aligned_cols=92 Identities=21% Similarity=0.281 Sum_probs=76.8
Q ss_pred ecccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEEC----CcCceeeeeecCCCCCeeceEEEEEeC---CCCE
Q psy16330 4 LQDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVD----YKNPKTTRVVKNTYQPKWNEEFTVLVS---PYSI 75 (101)
Q Consensus 4 ~~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~----~~~~~~T~~~~~~~~P~w~e~~~~~~~---~~~~ 75 (101)
...| ..++|.|+|.+| +|+. .+..+.+||||.+.+. +..+++|++++++.||.|+|.|.|.+. ....
T Consensus 10 ~l~~--~~~~L~v~v~~a~~L~~---~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~ 84 (137)
T 3rdl_A 10 KAEV--TDEKLHVTVRDAKNLIP---MDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRR 84 (137)
T ss_dssp EEEE--ETTEEEEEEEEEESCCC---CSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCE
T ss_pred EEEE--cCCEEEEEEEEeeCCCC---CCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCE
Confidence 3445 568999999999 6876 3556789999999883 233689999999999999999999986 2358
Q ss_pred EEEEEEeCCCCCCCCeeEEEEEECC
Q psy16330 76 ILFRLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 76 l~~~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
|.|+|||++.++++++||++.++|+
T Consensus 85 l~i~v~d~d~~~~~~~iG~~~i~l~ 109 (137)
T 3rdl_A 85 LSVEIWDWDRTTRNDFMGSLSFGVS 109 (137)
T ss_dssp EEEEEEECCSSSCCEEEEEEEEEHH
T ss_pred EEEEEEECCCCCCCceEEEEEEeHH
Confidence 9999999999999999999999874
No 21
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=4.3e-20 Score=105.31 Aligned_cols=87 Identities=24% Similarity=0.284 Sum_probs=75.9
Q ss_pred cccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECCcCceeeeeecCCCCCeeceEEEEEeC-----CCCEEEEEEEe
Q psy16330 9 SSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDYKNPKTTRVVKNTYQPKWNEEFTVLVS-----PYSIILFRLLD 82 (101)
Q Consensus 9 ~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~~~~~~T~~~~~~~~P~w~e~~~~~~~-----~~~~l~~~v~~ 82 (101)
...+.|.|+|.+| +|+. .+. +.+||||++++++. +++|++++++.||.|+|.|.|.+. ....|.|+|||
T Consensus 4 ~~~g~L~v~v~~a~~L~~---~~~-g~~dpyv~v~~~~~-~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d 78 (140)
T 2dmh_A 4 GSSGMLRVIVESASNIPK---TKF-GKPDPIVSVIFKDE-KKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKD 78 (140)
T ss_dssp CBCCEEEEEEEEEESCCC---CSS-SCCCEEEEEECSSC-EEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEE
T ss_pred CCCcEEEEEEEEeeCCCC---CCC-CCCCeEEEEEECCE-eEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEE
Confidence 3467899999999 6876 344 78999999999876 499999999999999999999986 35799999999
Q ss_pred CCCCCCCCeeEEEEEECC
Q psy16330 83 HRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 83 ~~~~~~~~~iG~~~~~l~ 100 (101)
++.++++++||++.+++.
T Consensus 79 ~d~~~~~~~lG~~~i~l~ 96 (140)
T 2dmh_A 79 FETIGQNKLIGTATVALK 96 (140)
T ss_dssp TTCSSSCCCCEEEEEEGG
T ss_pred CCCCCCCceEEEEEEEHH
Confidence 999999999999999875
No 22
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.84 E-value=4.8e-20 Score=105.39 Aligned_cols=94 Identities=19% Similarity=0.239 Sum_probs=78.0
Q ss_pred eecccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEEC--Cc--CceeeeeecCCCCCeeceEEEEEeCC----C
Q psy16330 3 LLQDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVD--YK--NPKTTRVVKNTYQPKWNEEFTVLVSP----Y 73 (101)
Q Consensus 3 ~~~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~--~~--~~~~T~~~~~~~~P~w~e~~~~~~~~----~ 73 (101)
+...|.+..+.|.|.|.+| +|+. .+..+ +||||++.+. +. .+++|++++++.||.|+|+|.|.+.. .
T Consensus 15 ~~l~y~~~~~~L~v~v~~a~~L~~---~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~ 90 (142)
T 2dmg_A 15 LTIRHSSQRNKLIVVVHACRNLIA---FSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQR 90 (142)
T ss_dssp EEEEEETTTTEEEEEEEEEECCCC---SSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHH
T ss_pred EEEEEeCCCCEEEEEEEEeECCCC---CCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCc
Confidence 4567888899999999999 6877 35557 9999999873 22 35899999999999999999999862 3
Q ss_pred CEEEEEEEeCCCCCC--CCeeEEEEEECC
Q psy16330 74 SIILFRLLDHRTFRR--DCTIGEKRLNTS 100 (101)
Q Consensus 74 ~~l~~~v~~~~~~~~--~~~iG~~~~~l~ 100 (101)
..|.|+|||++.+++ +++||++.+++.
T Consensus 91 ~~L~i~V~d~d~~~~~~~~~iG~~~i~l~ 119 (142)
T 2dmg_A 91 RTLDVAVKNSGGFLSKDKGLLGKVLVALA 119 (142)
T ss_dssp CEEEEEEEECCCSSCCSCCCCEEEEEECC
T ss_pred CEEEEEEEECCCccccCCcEEEEEEEecc
Confidence 589999999998753 579999999985
No 23
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.84 E-value=7.9e-20 Score=105.79 Aligned_cols=94 Identities=17% Similarity=0.153 Sum_probs=79.2
Q ss_pred eecccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEEC----CcCceeeeeecCCCCCeeceEEEEEeC---CCC
Q psy16330 3 LLQDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVD----YKNPKTTRVVKNTYQPKWNEEFTVLVS---PYS 74 (101)
Q Consensus 3 ~~~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~----~~~~~~T~~~~~~~~P~w~e~~~~~~~---~~~ 74 (101)
+...|....+.|.|+|.+| +|+.. + .+.+||||++.+. ...+++|++++++.||.|+|+|.|.+. ...
T Consensus 18 lsL~y~~~~~~L~V~v~~a~~L~~~---d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~ 93 (153)
T 3fbk_A 18 LRLSIDAQDRVLLLHIIEGKGLISK---Q-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQK 93 (153)
T ss_dssp EEEEEEESSSEEEEEEEEEESCCCC---S-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTS
T ss_pred EEEEEECCCCEEEEEEEEeeCCCCC---C-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCC
Confidence 4567899999999999999 68763 3 5789999999873 233589999999999999999999984 345
Q ss_pred EEEEEEEeCCCCCC-CCeeEEEEEECC
Q psy16330 75 IILFRLLDHRTFRR-DCTIGEKRLNTS 100 (101)
Q Consensus 75 ~l~~~v~~~~~~~~-~~~iG~~~~~l~ 100 (101)
.|.|+|||++.+++ +++||++.+++.
T Consensus 94 ~L~i~V~d~d~~~~~d~~lG~~~i~l~ 120 (153)
T 3fbk_A 94 RLLVTVWNRASQSRQSGLIGCMSFGVK 120 (153)
T ss_dssp EEEEEEEECCSSGGGCEEEEEEEEEHH
T ss_pred EEEEEEEeCCCCCCCCcEEEEEEEEHH
Confidence 79999999998876 899999999874
No 24
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.84 E-value=7.8e-21 Score=108.10 Aligned_cols=87 Identities=22% Similarity=0.205 Sum_probs=73.6
Q ss_pred cceEEEEEEee-EeCCCCCCCCCC-----------CCCcEEEEEECCcCceeeeeecCCCCCeeceEEEEEeCCCCEEEE
Q psy16330 11 VLQLLQLVECA-HLRRGGQGGGLL-----------KPNPYIELYVDYKNPKTTRVVKNTYQPKWNEEFTVLVSPYSIILF 78 (101)
Q Consensus 11 ~~~l~v~i~~a-~l~~~~~~~~~~-----------~~dpy~~v~~~~~~~~~T~~~~~~~~P~w~e~~~~~~~~~~~l~~ 78 (101)
.+.|.|+|.+| +|++. +.++ .+||||.+.+++....+|++.+++.||.|+|+|.|.+.....|.|
T Consensus 5 ~g~L~v~v~~a~~L~~~---d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~~~L~~ 81 (136)
T 1gmi_A 5 NGLLKIKICEAVSLKPT---AWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNGRKIEL 81 (136)
T ss_dssp EEEEEEEEEEEESCCCC---HHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEECEEEE
T ss_pred ceEEEEEEEeCcCCCCc---ccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCCCEEEE
Confidence 46899999999 68752 2222 389999999987655789999999999999999999875589999
Q ss_pred EEEeCCCCCCCCeeEEEEEECC
Q psy16330 79 RLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 79 ~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
+|||++.+++|++||++.++++
T Consensus 82 ~V~d~d~~~~dd~iG~~~i~l~ 103 (136)
T 1gmi_A 82 AVFHDAPIGYDDFVANCTIQFE 103 (136)
T ss_dssp EEEECCSSSSCEEEEEEEEEHH
T ss_pred EEEeCCCCCCCCEEEEEEEEHH
Confidence 9999999999999999999874
No 25
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.84 E-value=3.3e-20 Score=107.23 Aligned_cols=90 Identities=22% Similarity=0.323 Sum_probs=72.9
Q ss_pred ccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECCc-----CceeeeeecCCCCCeeceEEEEEeC-CCCEEEEEE
Q psy16330 8 FSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDYK-----NPKTTRVVKNTYQPKWNEEFTVLVS-PYSIILFRL 80 (101)
Q Consensus 8 ~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~~-----~~~~T~~~~~~~~P~w~e~~~~~~~-~~~~l~~~v 80 (101)
....+.|.|+|.+| +|+. .+..+.+||||++.+... ..++|++++++.||.|+|.|.|.+. ....|.|+|
T Consensus 16 ~~~~~~L~V~v~~a~~L~~---~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~l~~~V 92 (153)
T 3b7y_A 16 EENSRIVRVRVIAGIGLAK---KDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVHPQQHRLLFEV 92 (153)
T ss_dssp CTTCEEEEEEEEEEESCC----------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEECTTTCEEEEEE
T ss_pred CCCccEEEEEEEEeeCCCC---CCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEecCCCCEEEEEE
Confidence 45668899999999 6876 355678999999987631 3589999999999999999999987 556899999
Q ss_pred EeCCCCCCCCeeEEEEEECC
Q psy16330 81 LDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 81 ~~~~~~~~~~~iG~~~~~l~ 100 (101)
||++.++++++||++.+++.
T Consensus 93 ~d~d~~~~d~~iG~~~i~l~ 112 (153)
T 3b7y_A 93 FDENRLTRDDFLGQVDVPLY 112 (153)
T ss_dssp EECCSSSCCEEEEEEEEECC
T ss_pred EECCCCcCCCeeEEEEEEHH
Confidence 99999999999999999986
No 26
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.84 E-value=5.4e-20 Score=104.45 Aligned_cols=89 Identities=21% Similarity=0.290 Sum_probs=77.8
Q ss_pred ccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECCcCceeeeeec-CCCCCeeceEEEEEeC-CCCEEEEEEEeCC
Q psy16330 8 FSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDYKNPKTTRVVK-NTYQPKWNEEFTVLVS-PYSIILFRLLDHR 84 (101)
Q Consensus 8 ~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~~~~~~T~~~~-~~~~P~w~e~~~~~~~-~~~~l~~~v~~~~ 84 (101)
....+.|.|+|.+| +|+. .+..+.+||||.+.+++. .++|++++ ++.+|.|+|+|.|.+. ....|.|+|||++
T Consensus 6 ~~~~~~L~v~v~~a~~L~~---~d~~g~~dpyv~v~~~~~-~~kT~~~~~~~~nP~Wne~f~f~v~~~~~~l~~~V~d~~ 81 (136)
T 1wfj_A 6 SGPHGTLEVVLVSAKGLED---ADFLNNMDPYVQLTCRTQ-DQKSNVAEGMGTTPEWNETFIFTVSEGTTELKAKIFDKD 81 (136)
T ss_dssp CCCEEEEEEEEEEEEECSS---CCSSCSSCCCEEEESSSC-EEECCCCTTCCSSCEEEEEEEEEEESSCCEEEEEECCSS
T ss_pred CCCcEEEEEEEEeccCCCC---cccCCCcCceEEEEECCc-cceeEeccCCCCCCccCcEEEEEECCCCCEEEEEEEECC
Confidence 45678899999999 7877 355678999999998876 48999998 8999999999999987 4679999999999
Q ss_pred CCCCCCeeEEEEEECC
Q psy16330 85 TFRRDCTIGEKRLNTS 100 (101)
Q Consensus 85 ~~~~~~~iG~~~~~l~ 100 (101)
.+++|++||++.++|+
T Consensus 82 ~~~~d~~lG~~~i~l~ 97 (136)
T 1wfj_A 82 VGTEDDAVGEATIPLE 97 (136)
T ss_dssp SCTTTCCSEEEEEESH
T ss_pred CCCCCceEEEEEEEHH
Confidence 9999999999999874
No 27
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.83 E-value=1.8e-20 Score=107.89 Aligned_cols=95 Identities=19% Similarity=0.363 Sum_probs=79.7
Q ss_pred eecccccccceEEEEEEee-EeCCCCCCC-CCCCCCcEEEEEECC----cCceeeeeecCCCCCeeceEEEEEeCC----
Q psy16330 3 LLQDYFSSVLQLLQLVECA-HLRRGGQGG-GLLKPNPYIELYVDY----KNPKTTRVVKNTYQPKWNEEFTVLVSP---- 72 (101)
Q Consensus 3 ~~~~y~~~~~~l~v~i~~a-~l~~~~~~~-~~~~~dpy~~v~~~~----~~~~~T~~~~~~~~P~w~e~~~~~~~~---- 72 (101)
+...|.+..++|.|+|.+| +|+.. + ..+.+||||++.+.. ..+++|++++++.||.|+|+|.|.+..
T Consensus 14 ~sl~y~~~~~~L~V~v~~a~~L~~~---d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~ 90 (148)
T 3fdw_A 14 FSLKYEQQTQSLVVHVKECHQLAYA---DEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLA 90 (148)
T ss_dssp EEEEEETTTTEEEEEEEEEESCCCS---BTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGG
T ss_pred EEEEEeCCCCEEEEEEEEecCCCCc---ccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhC
Confidence 4567888999999999999 68762 3 357899999998752 225899999999999999999999873
Q ss_pred CCEEEEEEEeCCCCCCCCeeEEEEEECC
Q psy16330 73 YSIILFRLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 73 ~~~l~~~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
...|.|+|||++.++++++||++.++|.
T Consensus 91 ~~~L~~~V~d~d~~~~~~~iG~~~i~l~ 118 (148)
T 3fdw_A 91 QRTLQFSVWHHGRFGRNTFLGEAEIQMD 118 (148)
T ss_dssp GCEEEEEEEEECGGGCEEEEEEEEEEHH
T ss_pred ceEEEEEEEECCCCcCCcEEEEEEEEcc
Confidence 3479999999999989999999999874
No 28
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.83 E-value=7.2e-20 Score=105.49 Aligned_cols=87 Identities=21% Similarity=0.281 Sum_probs=74.4
Q ss_pred cceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECC----cCceeeeeecCCCCCeeceEEEEEeCC---CCEEEEEEEe
Q psy16330 11 VLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDY----KNPKTTRVVKNTYQPKWNEEFTVLVSP---YSIILFRLLD 82 (101)
Q Consensus 11 ~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~----~~~~~T~~~~~~~~P~w~e~~~~~~~~---~~~l~~~v~~ 82 (101)
.++|.|+|.+| +|+. .+..+.+||||++.+.. ..+++|++++++.+|.|+|+|.|.+.. ...|.|+|||
T Consensus 30 ~~~L~v~v~~a~~L~~---~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d 106 (149)
T 1a25_A 30 REVLIVVVRDAKNLVP---MDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWD 106 (149)
T ss_dssp SSEEEEEEEEEESCCC---CSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEE
T ss_pred CCEEEEEEEEeeCCCC---CCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEE
Confidence 56799999999 6876 35567899999998853 346899999999999999999999873 3589999999
Q ss_pred CCCCCCCCeeEEEEEECC
Q psy16330 83 HRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 83 ~~~~~~~~~iG~~~~~l~ 100 (101)
++.++++++||++.+++.
T Consensus 107 ~d~~~~~~~iG~~~i~l~ 124 (149)
T 1a25_A 107 WDLTSRNDFMGSLSFGIS 124 (149)
T ss_dssp CCSSSCCEEEEEEEEEHH
T ss_pred CCCCCCCCEEEEEEEEHH
Confidence 999989999999999864
No 29
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.83 E-value=6.6e-20 Score=108.27 Aligned_cols=91 Identities=23% Similarity=0.317 Sum_probs=72.6
Q ss_pred cccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECCc-----CceeeeeecCCCCCeeceEEEEEeC-CCCEEEEE
Q psy16330 7 YFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDYK-----NPKTTRVVKNTYQPKWNEEFTVLVS-PYSIILFR 79 (101)
Q Consensus 7 y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~~-----~~~~T~~~~~~~~P~w~e~~~~~~~-~~~~l~~~ 79 (101)
.....+.|.|+|.+| +|+. .+..+.+||||++.+.+. .+++|++++++.||.|+|.|.|.+. ....|.|+
T Consensus 3 ~~~~~g~L~V~v~~a~~L~~---~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~~~~~~L~~~ 79 (176)
T 3m7f_B 3 HNDDTRVVRVKVIAGIGLAK---KDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVLPQRHRILFE 79 (176)
T ss_dssp CCTTCEEEEEEEEEEESCC------CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEECTTTCEEEEE
T ss_pred CCCCcEEEEEEEEEeeCCCC---cCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEcCCCCEEEEE
Confidence 445678899999999 6876 355678999999988642 2479999999999999999999997 45689999
Q ss_pred EEeCCCCCCCCeeEEEEEECC
Q psy16330 80 LLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 80 v~~~~~~~~~~~iG~~~~~l~ 100 (101)
|||++.++++++||++.++|.
T Consensus 80 V~d~d~~~~d~~lG~~~i~l~ 100 (176)
T 3m7f_B 80 VFDENRLTRDDFLGQVDVPLY 100 (176)
T ss_dssp EEECC----CEEEEEEEEESC
T ss_pred EEECCCCCCCcEEEEEEEEHH
Confidence 999999999999999999986
No 30
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.83 E-value=1.9e-20 Score=106.83 Aligned_cols=95 Identities=25% Similarity=0.330 Sum_probs=79.7
Q ss_pred eecccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEEC----CcCceeeeeecCCCCCeeceEEEEEe-C----C
Q psy16330 3 LLQDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVD----YKNPKTTRVVKNTYQPKWNEEFTVLV-S----P 72 (101)
Q Consensus 3 ~~~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~----~~~~~~T~~~~~~~~P~w~e~~~~~~-~----~ 72 (101)
+...|.+..++|.|+|.+| +|+. .+..+.+||||++.+. ...+++|++++++.||.|+|.|.|.+ . .
T Consensus 12 ~~l~y~~~~~~L~v~v~~a~~L~~---~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~ 88 (141)
T 1v27_A 12 IKLWFDKVGHQLIVTILGAKDLPS---REDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFR 88 (141)
T ss_dssp EEEEEETTTTEEEEEEEEEESCCC---CSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGG
T ss_pred EEEEEeCCCCEEEEEEEEccCCCC---cCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhc
Confidence 4557888889999999999 6876 3556789999999872 23468999999999999999999984 3 2
Q ss_pred CCEEEEEEEeCCCCCC--CCeeEEEEEECC
Q psy16330 73 YSIILFRLLDHRTFRR--DCTIGEKRLNTS 100 (101)
Q Consensus 73 ~~~l~~~v~~~~~~~~--~~~iG~~~~~l~ 100 (101)
...|.|+|||++.+++ +++||++.+++.
T Consensus 89 ~~~l~i~V~d~d~~~~~~~~~lG~~~i~l~ 118 (141)
T 1v27_A 89 ERMLEITLWDQARVREEESEFLGEILIELE 118 (141)
T ss_dssp TCEEEEEEEEBCSSSSCCBCCCEEEEEEGG
T ss_pred CCEEEEEEEECCCCcCCCCceEEEEEEEcc
Confidence 4699999999999876 899999999875
No 31
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.82 E-value=2.5e-20 Score=106.56 Aligned_cols=91 Identities=19% Similarity=0.291 Sum_probs=76.6
Q ss_pred cccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECCc-------------CceeeeeecCCCCCeeceEEEEE-
Q psy16330 5 QDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDYK-------------NPKTTRVVKNTYQPKWNEEFTVL- 69 (101)
Q Consensus 5 ~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~~-------------~~~~T~~~~~~~~P~w~e~~~~~- 69 (101)
..|. .+.|.|+|.+| +|+. .+..+.+||||++.+.+. .+++|++++++.||.|+|.|.|.
T Consensus 13 l~y~--~~~L~V~v~~a~~L~~---~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~ 87 (142)
T 1rh8_A 13 INYD--LGNLIIHILQARNLVP---RDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKS 87 (142)
T ss_dssp EEEE--TTEEEEEEEEEESCCC---CSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECS
T ss_pred EEEc--CCEEEEEEEEecCCCC---CCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECC
Confidence 3455 57899999999 6877 355688999999998753 24789999999999999999997
Q ss_pred eC----CCCEEEEEEEeCCCCCCCCeeEEEEEECC
Q psy16330 70 VS----PYSIILFRLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 70 ~~----~~~~l~~~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
+. ....|.|+|||++.++++++||++.++|+
T Consensus 88 v~~~~l~~~~l~i~V~d~d~~~~~~~lG~~~i~l~ 122 (142)
T 1rh8_A 88 ISMEQLMKKTLEVTVWDYDRFSSNDFLGEVLIDLS 122 (142)
T ss_dssp CCHHHHTTCEEEEEEEEECSSSCEEEEEEEEEETT
T ss_pred cCHHHccCCEEEEEEEECCCCCCCceEEEEEEecc
Confidence 54 46799999999999999999999999986
No 32
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.82 E-value=3.8e-20 Score=108.95 Aligned_cols=92 Identities=21% Similarity=0.276 Sum_probs=75.8
Q ss_pred ecccccccceEEEEEEee-EeCCCCCCCC-CCCCCcEEEEEECCc----CceeeeeecCCCCCeeceEEEEEeC-CCCEE
Q psy16330 4 LQDYFSSVLQLLQLVECA-HLRRGGQGGG-LLKPNPYIELYVDYK----NPKTTRVVKNTYQPKWNEEFTVLVS-PYSII 76 (101)
Q Consensus 4 ~~~y~~~~~~l~v~i~~a-~l~~~~~~~~-~~~~dpy~~v~~~~~----~~~~T~~~~~~~~P~w~e~~~~~~~-~~~~l 76 (101)
...| ..+.|.|+|.+| +|+. .+. .+.+||||++.+... .+++|++++++.||.|+|+|.|.+. ....|
T Consensus 24 ~l~y--~~~~L~V~v~~a~~L~~---~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~L 98 (171)
T 2q3x_A 24 GMED--KKGQLEVEVIRARSLTQ---KPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDESPQGKVL 98 (171)
T ss_dssp EEEE--ETTEEEEEEEEEESCCC---CC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSSCCTTEEE
T ss_pred EEEE--CCCEEEEEEEEeeCCCC---CCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEecCCCCEE
Confidence 3445 578899999999 6876 343 578999999987532 2589999999999999999999886 56789
Q ss_pred EEEEE-eCCCCCCCCeeEEEEEECC
Q psy16330 77 LFRLL-DHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 77 ~~~v~-~~~~~~~~~~iG~~~~~l~ 100 (101)
.|+|| |++.++++++||++.++|+
T Consensus 99 ~~~V~~d~d~~~~d~~iG~~~i~l~ 123 (171)
T 2q3x_A 99 QVIVWGDYGRMDHKCFMGVAQILLE 123 (171)
T ss_dssp EEEEEEECSTTCSSEEEEEEEECGG
T ss_pred EEEEEEcCCCCCCCCEEEEEEEEHH
Confidence 99999 9999999999999999875
No 33
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.82 E-value=6.2e-20 Score=102.96 Aligned_cols=89 Identities=28% Similarity=0.509 Sum_probs=72.7
Q ss_pred cceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECC--cCceeeeeecCCCCCeeceEEEEEeC--CCCEEEEEEEeCCC
Q psy16330 11 VLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDY--KNPKTTRVVKNTYQPKWNEEFTVLVS--PYSIILFRLLDHRT 85 (101)
Q Consensus 11 ~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~--~~~~~T~~~~~~~~P~w~e~~~~~~~--~~~~l~~~v~~~~~ 85 (101)
.+.|.|+|.+| +|+.....+..+.+||||.+.+++ ..+++|++++++.||.|+|+|.|.+. ....|.|+|||++.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 46799999999 676510002347799999999875 24689999999999999999999995 45789999999998
Q ss_pred CCCCCeeEEEEEECC
Q psy16330 86 FRRDCTIGEKRLNTS 100 (101)
Q Consensus 86 ~~~~~~iG~~~~~l~ 100 (101)
. ++++||++.++|+
T Consensus 82 ~-~~~~iG~~~i~l~ 95 (126)
T 1rlw_A 82 V-MDETLGTATFTVS 95 (126)
T ss_dssp S-CCEEEEEEEEEGG
T ss_pred C-CCceeEEEEEEHH
Confidence 7 4889999999975
No 34
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.80 E-value=1.3e-18 Score=109.03 Aligned_cols=96 Identities=25% Similarity=0.282 Sum_probs=81.7
Q ss_pred ceecccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECC--cCceeeeeecCCCCCeeceEEEEEeC----CCC
Q psy16330 2 FLLQDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDY--KNPKTTRVVKNTYQPKWNEEFTVLVS----PYS 74 (101)
Q Consensus 2 ~~~~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~--~~~~~T~~~~~~~~P~w~e~~~~~~~----~~~ 74 (101)
.+-..|....+.|.|+|.+| +|+. .+..+.+||||.+.+.. ...++|++++++.||.|+|+|.|.+. ...
T Consensus 9 ~~~l~y~~~~~~L~v~v~~a~~L~~---~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~ 85 (284)
T 2r83_A 9 QYSLDYDFQNNQLLVGIIQAAELPA---LDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGK 85 (284)
T ss_dssp EEEEEEETTTTEEEEEEEEEECCCC---CSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTC
T ss_pred EEEEEEECCCCEEEEEEEEeeCCCC---CCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcC
Confidence 34567888999999999999 6876 35567899999998853 33589999999999999999999886 246
Q ss_pred EEEEEEEeCCCCCCCCeeEEEEEECC
Q psy16330 75 IILFRLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 75 ~l~~~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
.|.|+|||.+.++++++||++.++|.
T Consensus 86 ~l~~~V~d~d~~~~~~~lG~~~i~l~ 111 (284)
T 2r83_A 86 TLVMAVYDFDRFSKHDIIGEFKVPMN 111 (284)
T ss_dssp EEEEEEEECCSSSCCCEEEEEEEEGG
T ss_pred EEEEEEEECCCCCCCceeEEEEEcch
Confidence 99999999999989999999999875
No 35
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.79 E-value=1.8e-18 Score=109.30 Aligned_cols=93 Identities=26% Similarity=0.354 Sum_probs=79.8
Q ss_pred eecccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEEC--CcCceeeeeecCCCCCeeceEEEEEeC----CCCE
Q psy16330 3 LLQDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVD--YKNPKTTRVVKNTYQPKWNEEFTVLVS----PYSI 75 (101)
Q Consensus 3 ~~~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~--~~~~~~T~~~~~~~~P~w~e~~~~~~~----~~~~ 75 (101)
+...|....+.|.|+|.+| +|+. .+..+.+||||++++. +..+++|++++++.||.|+|+|.|.+. ....
T Consensus 11 ~~l~y~~~~~~L~v~v~~a~~L~~---~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~ 87 (296)
T 1dqv_A 11 FALRYLYGSDQLVVRILQALDLPA---KDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRK 87 (296)
T ss_dssp EEEECCSSSCEEEEEEEEEECCCC---CSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCC
T ss_pred EEEEEeCCCCEEEEEEEEeECCCC---cCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCE
Confidence 4567888999999999999 6876 3556789999999983 444689999999999999999999986 2358
Q ss_pred EEEEEEeCCCCCCCCeeEEEEEE
Q psy16330 76 ILFRLLDHRTFRRDCTIGEKRLN 98 (101)
Q Consensus 76 l~~~v~~~~~~~~~~~iG~~~~~ 98 (101)
|.|+|||++.++++++||++.++
T Consensus 88 L~~~V~d~d~~~~~~~iG~~~i~ 110 (296)
T 1dqv_A 88 LHFSVYDFDRFSRHDLIGQVVLD 110 (296)
T ss_dssp CEEEEEECCSSSCCCEEEEEECC
T ss_pred EEEEEEEcCCCCCCceEEEEEec
Confidence 99999999999999999999884
No 36
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.78 E-value=2.7e-18 Score=97.21 Aligned_cols=81 Identities=16% Similarity=0.209 Sum_probs=66.3
Q ss_pred cceEEEEEEeeEeCCCCCCCCCCCCCcEEEEEECCcCceeeeeec-CCCCCeeceEEEEEeC-CCCEEEEEEEeCCCCCC
Q psy16330 11 VLQLLQLVECAHLRRGGQGGGLLKPNPYIELYVDYKNPKTTRVVK-NTYQPKWNEEFTVLVS-PYSIILFRLLDHRTFRR 88 (101)
Q Consensus 11 ~~~l~v~i~~a~l~~~~~~~~~~~~dpy~~v~~~~~~~~~T~~~~-~~~~P~w~e~~~~~~~-~~~~l~~~v~~~~~~~~ 88 (101)
++.|.|+|.+|++.. ..+.+||||++. .. ..+|++++ ++.||.|||+|.|.+. ....|.|+|||++ +++
T Consensus 4 ~~~L~V~V~~A~~l~-----~~g~~DPYv~v~--~~-~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~ 74 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDG-----AQEKFNTYVTLK--VQ-NVKSTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIW 74 (131)
T ss_dssp CEEEEEEEEEEECSS-----CGGGCEEEEEEE--ET-TEEEECCCEESSSCEEEEEEEEEECCCSSEEEEEEEECC-SSC
T ss_pred ceEEEEEEEEeECCC-----CCCCcCeEEEEE--ec-CEEEeEecCCCCCceECCEEEEEEeCCCCeEEEEEEECC-CCC
Confidence 478999999995322 246789999998 23 35666665 6999999999999997 5668999999999 889
Q ss_pred CCeeEEEEEECC
Q psy16330 89 DCTIGEKRLNTS 100 (101)
Q Consensus 89 ~~~iG~~~~~l~ 100 (101)
|++||++.++|+
T Consensus 75 dd~iG~~~i~l~ 86 (131)
T 2cjt_A 75 DTMVGTVWIPLR 86 (131)
T ss_dssp EEEEEEEEEEGG
T ss_pred CCeEEEEEEEHH
Confidence 999999999985
No 37
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.76 E-value=8.5e-18 Score=105.37 Aligned_cols=94 Identities=22% Similarity=0.279 Sum_probs=78.4
Q ss_pred ecccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEEC--Cc--CceeeeeecCCCCCeeceEEEEEeCC----CC
Q psy16330 4 LQDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVD--YK--NPKTTRVVKNTYQPKWNEEFTVLVSP----YS 74 (101)
Q Consensus 4 ~~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~--~~--~~~~T~~~~~~~~P~w~e~~~~~~~~----~~ 74 (101)
...|.+..+.|.|.|.+| +|+. .+..+.+|||+++.+. +. .+++|++++++.||.|+|.|.|.+.. ..
T Consensus 142 ~l~~~p~~~~l~v~v~~a~~L~~---~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~ 218 (284)
T 2r83_A 142 SLRYVPTAGKLTVVILEAKNLKK---MDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKV 218 (284)
T ss_dssp EEEEETTTTEEEEEEEEEESCCC---CSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGE
T ss_pred EEEecCcCCceEEEEEEeECCCC---cCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCce
Confidence 345677788999999999 6876 3556789999999874 22 25799999999999999999999873 34
Q ss_pred EEEEEEEeCCCCCCCCeeEEEEEECC
Q psy16330 75 IILFRLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 75 ~l~~~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
.|.|+|||++.++++++||++.++++
T Consensus 219 ~l~i~V~d~d~~~~~~~iG~~~i~l~ 244 (284)
T 2r83_A 219 QVVVTVLDYDKIGKNDAIGKVFVGYN 244 (284)
T ss_dssp EEEEEEEECCSSSCCCEEEEEEEETT
T ss_pred EEEEEEEeCCCCCCCcEEEEEEECCC
Confidence 79999999999999999999999985
No 38
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.75 E-value=7e-18 Score=113.73 Aligned_cols=86 Identities=16% Similarity=0.173 Sum_probs=74.7
Q ss_pred ccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECCcCceeeeeecCCCCCeeceEEEEEeC---CCCEEEEEEEeCCC
Q psy16330 10 SVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDYKNPKTTRVVKNTYQPKWNEEFTVLVS---PYSIILFRLLDHRT 85 (101)
Q Consensus 10 ~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~~~~~~T~~~~~~~~P~w~e~~~~~~~---~~~~l~~~v~~~~~ 85 (101)
..+.|.|+|.+| +|+. +.++.+||||++.+++. .++|+++++++||.|+|.|.|.+. ....|.|+|||+|.
T Consensus 392 ~~~~L~V~V~~A~~L~~----D~~g~sDPYV~v~l~~~-~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~ 466 (540)
T 3nsj_A 392 GLAHLVVSNFRAEHLWG----DYTTATDAYLKVFFGGQ-EFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY 466 (540)
T ss_dssp TEEEEEEEEEEEESCCC----SSCSCCCEEEEEEETTE-EEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS
T ss_pred cccEEEEEEEEccCCCc----ccCCCcCeEEEEEECCE-eeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC
Confidence 367899999999 5754 45678999999999876 499999999999999999998753 56789999999999
Q ss_pred CCCCCeeEEEEEECC
Q psy16330 86 FRRDCTIGEKRLNTS 100 (101)
Q Consensus 86 ~~~~~~iG~~~~~l~ 100 (101)
.++|++||++.++|.
T Consensus 467 ~~~dD~LG~~~~~L~ 481 (540)
T 3nsj_A 467 GWDDDLLGSCDRSPH 481 (540)
T ss_dssp SSCCEEEEEEEECCC
T ss_pred CCCCCEEEEEEEEee
Confidence 999999999999875
No 39
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.75 E-value=1.6e-17 Score=97.47 Aligned_cols=81 Identities=16% Similarity=0.209 Sum_probs=67.0
Q ss_pred cceEEEEEEeeEeCCCCCCCCCCCCCcEEEEEECCcCceeeeeec-CCCCCeeceEEEEEeC-CCCEEEEEEEeCCCCCC
Q psy16330 11 VLQLLQLVECAHLRRGGQGGGLLKPNPYIELYVDYKNPKTTRVVK-NTYQPKWNEEFTVLVS-PYSIILFRLLDHRTFRR 88 (101)
Q Consensus 11 ~~~l~v~i~~a~l~~~~~~~~~~~~dpy~~v~~~~~~~~~T~~~~-~~~~P~w~e~~~~~~~-~~~~l~~~v~~~~~~~~ 88 (101)
++.|.|+|.+|++.. ..+.+||||++. .. ..+|++++ ++.||.|||+|.|.+. ....|.|+|||++ ++.
T Consensus 13 ~~~L~V~V~~A~~l~-----~~g~~DPYV~v~--~~-~~kt~~~~~~t~nP~WnE~f~f~v~~~~~~L~~~V~D~d-~~~ 83 (167)
T 2cjs_A 13 LSLLCVGVKKAKFDG-----AQEKFNTYVTLK--VQ-NVESTTIAVRGSQPSWEQDFMFEINRLDLGLTVEVWNKG-LIW 83 (167)
T ss_dssp CCEEEEEEEEEECSS-----CGGGCEEEEEEE--ET-TEEEECCCEESSSCEEEEEEEEECCCTTSEEEEEEEECC-SSC
T ss_pred eEEEEEEEEEEECCC-----CCCCCCeEEEEE--ec-ceEEEEecCCCCCCCCCCEEEEEeeCCCCEEEEEEEECC-CCC
Confidence 568999999995322 246789999998 23 36777776 5999999999999997 5678999999999 889
Q ss_pred CCeeEEEEEECC
Q psy16330 89 DCTIGEKRLNTS 100 (101)
Q Consensus 89 ~~~iG~~~~~l~ 100 (101)
|++||++.++|+
T Consensus 84 dd~iG~~~i~L~ 95 (167)
T 2cjs_A 84 DTMVGTVWIPLR 95 (167)
T ss_dssp CEEEEEEEEEGG
T ss_pred CceEEEEEEEHH
Confidence 999999999985
No 40
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.74 E-value=2.9e-17 Score=109.92 Aligned_cols=87 Identities=25% Similarity=0.406 Sum_probs=75.3
Q ss_pred ccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECCcCceeeeeecCCCCCeeceEEEEEeC--CCCEEEEEEEeCCCC
Q psy16330 10 SVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDYKNPKTTRVVKNTYQPKWNEEFTVLVS--PYSIILFRLLDHRTF 86 (101)
Q Consensus 10 ~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~~~~~~T~~~~~~~~P~w~e~~~~~~~--~~~~l~~~v~~~~~~ 86 (101)
..+.|.|+|.+| +|+. .+..|.+||||.+.+++. +++|++++++.||.|++.|.|.+. ....|.|+|||++.+
T Consensus 385 ~~~~l~v~v~~a~~L~~---~d~~~~sdpyv~v~~~~~-~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~~ 460 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKA---CKPNGKSNPYCEISMGSQ-SYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQF 460 (510)
T ss_dssp -CEEEEEEEEEEESCCC---CSTTSCCCEEEEEEETTE-EEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCSS
T ss_pred CCceEEEEeceeecCCC---CCCCCCCCeEEEEEECCe-eccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCCC
Confidence 456899999999 6876 456688999999999776 599999999999999999999886 346799999999999
Q ss_pred CCCCeeEEEEEECC
Q psy16330 87 RRDCTIGEKRLNTS 100 (101)
Q Consensus 87 ~~~~~iG~~~~~l~ 100 (101)
++|++||++.+++.
T Consensus 461 ~~~d~lG~~~~~l~ 474 (510)
T 3jzy_A 461 SPDDFLGRTEIPVA 474 (510)
T ss_dssp SSCCEEEEEEEEHH
T ss_pred CCCCceEEEEEEHH
Confidence 99999999999874
No 41
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.71 E-value=6.7e-18 Score=106.63 Aligned_cols=94 Identities=20% Similarity=0.211 Sum_probs=78.4
Q ss_pred ecccccccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEEC--C--cCceeeeeecCCCCCeeceEEEEEeCC----CC
Q psy16330 4 LQDYFSSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVD--Y--KNPKTTRVVKNTYQPKWNEEFTVLVSP----YS 74 (101)
Q Consensus 4 ~~~y~~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~--~--~~~~~T~~~~~~~~P~w~e~~~~~~~~----~~ 74 (101)
...|.+..+.|.|.|.+| +|+. .+..+.+|||+++++. + ..+++|++++++.||.|+|.|.|.+.. ..
T Consensus 144 sl~y~~~~~~l~v~v~~a~~L~~---~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~ 220 (296)
T 1dqv_A 144 SLCYLPTAGLLTVTIIKASNLKA---MDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENV 220 (296)
T ss_dssp EEEEETTTTEEEEEEEEEESCCC---CSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSC
T ss_pred EEEeccccceeEEEEEEeecCCc---cCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCc
Confidence 446777789999999999 6876 3556778999999875 3 235899999999999999999998862 34
Q ss_pred EEEEEEEeCCCCCCCCeeEEEEEECC
Q psy16330 75 IILFRLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 75 ~l~~~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
.|.|+|||++.++++++||++.++++
T Consensus 221 ~L~i~V~d~d~~~~~~~iG~~~i~l~ 246 (296)
T 1dqv_A 221 GLSIAVVDYDCIGHNEVIGVCRVGPE 246 (296)
T ss_dssp CCCCEEEECCSSSCCEEEEECCCSSC
T ss_pred EEEEEEEeCCCCCCCceEEEEEECCc
Confidence 79999999999999999999998875
No 42
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.66 E-value=1.2e-15 Score=104.58 Aligned_cols=88 Identities=18% Similarity=0.315 Sum_probs=73.5
Q ss_pred ccceEEEEEEee-EeCCCCCCC--CCCCCCcEEEEEECCc----CceeeeeecCC-CCCeeceEEEEEeC-C-CCEEEEE
Q psy16330 10 SVLQLLQLVECA-HLRRGGQGG--GLLKPNPYIELYVDYK----NPKTTRVVKNT-YQPKWNEEFTVLVS-P-YSIILFR 79 (101)
Q Consensus 10 ~~~~l~v~i~~a-~l~~~~~~~--~~~~~dpy~~v~~~~~----~~~~T~~~~~~-~~P~w~e~~~~~~~-~-~~~l~~~ 79 (101)
....|.|+|..| +|+.. + ..+.+||||++.+.+. .+++|++++++ .||.|+|+|.|.+. + ...|.|+
T Consensus 495 ~~~~L~V~Vi~A~~L~~~---d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~ 571 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKV---NKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFM 571 (624)
T ss_dssp CCEEEEEEEEEEESCCCC---SSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEE
T ss_pred cceEEEEEEEEcCCCCcc---cccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEE
Confidence 456899999999 68763 3 2477999999998542 35899999986 99999999999987 3 3589999
Q ss_pred EEeCCCCCCCCeeEEEEEECC
Q psy16330 80 LLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 80 v~~~~~~~~~~~iG~~~~~l~ 100 (101)
|||++.++++++||++.++|+
T Consensus 572 V~D~D~~~~dd~iG~~~ipl~ 592 (624)
T 1djx_A 572 VEDYDSSSKNDFIGQSTIPWN 592 (624)
T ss_dssp EEECCSSSCCEEEEEEEEEGG
T ss_pred EEEcCCCCCCceeEEEEEEHH
Confidence 999999999999999999975
No 43
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.65 E-value=1.5e-15 Score=86.19 Aligned_cols=81 Identities=14% Similarity=0.187 Sum_probs=70.1
Q ss_pred cceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECCcCceeeeeec-CCCCCeeceEEEEEeC----CCCEEEEEEEeCC
Q psy16330 11 VLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDYKNPKTTRVVK-NTYQPKWNEEFTVLVS----PYSIILFRLLDHR 84 (101)
Q Consensus 11 ~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~~~~~~T~~~~-~~~~P~w~e~~~~~~~----~~~~l~~~v~~~~ 84 (101)
.+-|.|.+..| +|+ +..|||+++.+.+. +++|++++ ++.+|.|+|.|.|.+. ....|.|.|+|++
T Consensus 20 ~msL~V~l~~a~~Lp--------g~~Dp~akv~FRg~-k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~ 90 (144)
T 3l9b_A 20 HMALIVHLKTVSELR--------GRADRIAKVTFRGQ-SFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYS 90 (144)
T ss_dssp CEEEEEEEEEEESCC--------SCEEEEEEEEETTE-EEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEEC
T ss_pred cEEEEEEEEEecCCC--------CCCCCeEEEEEecc-ceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECc
Confidence 35577888888 454 36899999999776 59999998 6999999999999986 4569999999999
Q ss_pred CCCCCCeeEEEEEECC
Q psy16330 85 TFRRDCTIGEKRLNTS 100 (101)
Q Consensus 85 ~~~~~~~iG~~~~~l~ 100 (101)
.++++.+||++.++|+
T Consensus 91 ~v~~nrlIG~~~i~Lq 106 (144)
T 3l9b_A 91 KVFSNKLIGTFRMVLQ 106 (144)
T ss_dssp TTSCCEEEEEEEEESH
T ss_pred cccCCCEEEEEEEEhH
Confidence 9999999999999985
No 44
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.64 E-value=5.6e-16 Score=107.54 Aligned_cols=90 Identities=28% Similarity=0.496 Sum_probs=73.8
Q ss_pred ccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECC--cCceeeeeecCCCCCeeceEEEEEeC--CCCEEEEEEEeCC
Q psy16330 10 SVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDY--KNPKTTRVVKNTYQPKWNEEFTVLVS--PYSIILFRLLDHR 84 (101)
Q Consensus 10 ~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~--~~~~~T~~~~~~~~P~w~e~~~~~~~--~~~~l~~~v~~~~ 84 (101)
..+.|.|+|.+| +|+.....+..+.+||||++++.+ ..+++|++++++.+|.|+|+|.|.+. ....|.|+|||++
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~D 95 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN 95 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEECC
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEECC
Confidence 467899999999 676500002347799999999874 23689999999999999999999997 4568999999999
Q ss_pred CCCCCCeeEEEEEECC
Q psy16330 85 TFRRDCTIGEKRLNTS 100 (101)
Q Consensus 85 ~~~~~~~iG~~~~~l~ 100 (101)
.++ |++||++.++|.
T Consensus 96 ~~~-ddfIG~v~I~L~ 110 (749)
T 1cjy_A 96 YVM-DETLGTATFTVS 110 (749)
T ss_dssp SSS-CEEEEEECCBST
T ss_pred CCC-CceeEEEEEEHH
Confidence 998 999999999875
No 45
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.58 E-value=1.2e-14 Score=100.36 Aligned_cols=89 Identities=20% Similarity=0.284 Sum_probs=74.2
Q ss_pred cccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEEC----CcCceeeeeecCCCCCeeceEEEEEeC---CCCEEEEEE
Q psy16330 9 SSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVD----YKNPKTTRVVKNTYQPKWNEEFTVLVS---PYSIILFRL 80 (101)
Q Consensus 9 ~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~----~~~~~~T~~~~~~~~P~w~e~~~~~~~---~~~~l~~~v 80 (101)
.....|.|.+..| +|+. .+..+.+|||+++.+. ...+++|++++++.||.|+|.|.|.+. ....|.++|
T Consensus 169 ~~~~~L~V~v~~a~~L~~---~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v 245 (674)
T 3pfq_A 169 IDREVLIVVVRDAKNLVP---MDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEI 245 (674)
T ss_dssp ECSSEEEEEEEEEESCCC---CSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEE
T ss_pred eccceeeeeeecccccCC---CCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEE
Confidence 3457788999998 6876 4566889999999872 233589999999999999999999886 345799999
Q ss_pred EeCCCCCCCCeeEEEEEECC
Q psy16330 81 LDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 81 ~~~~~~~~~~~iG~~~~~l~ 100 (101)
||++..+++++||++.++++
T Consensus 246 ~d~d~~~~dd~iG~~~i~l~ 265 (674)
T 3pfq_A 246 WDWDLTSRNDFMGSLSFGIS 265 (674)
T ss_dssp EECCSSSCCEECCBCCCBTT
T ss_pred eecccccccccccccccchh
Confidence 99999999999999888764
No 46
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.43 E-value=6.4e-15 Score=98.48 Aligned_cols=84 Identities=15% Similarity=0.067 Sum_probs=9.2
Q ss_pred cccceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECCcCceeeeeecCC---CCCeeceEEEEEeC-CCCEEEEEEEeC
Q psy16330 9 SSVLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDYKNPKTTRVVKNT---YQPKWNEEFTVLVS-PYSIILFRLLDH 83 (101)
Q Consensus 9 ~~~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~~~~~~T~~~~~~---~~P~w~e~~~~~~~-~~~~l~~~v~~~ 83 (101)
...+.|.|+|.+| +|+.. + ||||.+.+++....||++++++ .||.|+|+|.|.+. ....|.++|||.
T Consensus 8 r~~~~L~V~VieAk~L~~~---d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~~~~~~L~v~V~d~ 79 (483)
T 3bxj_A 8 RVDNVLKLWIIEARELPPK---K-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNLPAVRALRLHLYRD 79 (483)
T ss_dssp EEEECC-----------------------------------------------------CCEECC---------------
T ss_pred eeccEEEEEEEEcCCcCCC---C-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecCCCccEEEEEEEec
Confidence 3456788999999 67652 2 8999999987656799999998 99999999999854 457899999994
Q ss_pred -C---CCCCCCeeEEEEEECC
Q psy16330 84 -R---TFRRDCTIGEKRLNTS 100 (101)
Q Consensus 84 -~---~~~~~~~iG~~~~~l~ 100 (101)
+ ..++|++||.+.++++
T Consensus 80 ~d~~~~~~~d~~lG~v~i~l~ 100 (483)
T 3bxj_A 80 SDKKRKKDKAGYVGLVTVPVA 100 (483)
T ss_dssp ---------------------
T ss_pred CCccccCCCCceEEEEEEEHH
Confidence 4 3678899999999875
No 47
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=99.38 E-value=2.8e-12 Score=90.50 Aligned_cols=78 Identities=21% Similarity=0.281 Sum_probs=62.9
Q ss_pred ceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECC-----cCceeeeeecC-CCCCeece-EEEEE-eC--CCCEEEEEE
Q psy16330 12 LQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDY-----KNPKTTRVVKN-TYQPKWNE-EFTVL-VS--PYSIILFRL 80 (101)
Q Consensus 12 ~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~-----~~~~~T~~~~~-~~~P~w~e-~~~~~-~~--~~~~l~~~v 80 (101)
..|.|+|..| +|+. ...||||+|.+.+ ..+++|+++++ +.||.||| .|.|. +. ....|.|.|
T Consensus 725 ~~L~V~Visaq~L~~-------~~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V 797 (885)
T 3ohm_B 725 NALRVKVISGQFLSD-------RKVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAA 797 (885)
T ss_dssp EEEEEEEEEEESCCS-------SCCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEE
T ss_pred eEEEEEEEEeccCcc-------cCCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEE
Confidence 4789999999 5764 2479999999854 12479999986 69999999 69998 54 345899999
Q ss_pred EeCCCCCCCCeeEEEEEECC
Q psy16330 81 LDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 81 ~~~~~~~~~~~iG~~~~~l~ 100 (101)
||++ +++||++.++|+
T Consensus 798 ~D~d----ddfiG~~~lpL~ 813 (885)
T 3ohm_B 798 FEEG----GKFVGHRILPVS 813 (885)
T ss_dssp EETT----TEEEEEEEEETT
T ss_pred EcCC----ccEEeeEEEEHH
Confidence 9987 789999999986
No 48
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=99.37 E-value=4.7e-12 Score=88.90 Aligned_cols=78 Identities=15% Similarity=0.229 Sum_probs=63.2
Q ss_pred ceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECCc------CceeeeeecC-CCCCeeceE-EEEE-eC--CCCEEEEE
Q psy16330 12 LQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDYK------NPKTTRVVKN-TYQPKWNEE-FTVL-VS--PYSIILFR 79 (101)
Q Consensus 12 ~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~~------~~~~T~~~~~-~~~P~w~e~-~~~~-~~--~~~~l~~~ 79 (101)
..|.|+|..| +|+. ...||||+|.+.+. .+++|+++++ +.||.|||+ |.|. +. ....|.|.
T Consensus 650 ~~L~V~Visaq~L~~-------~~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~ 722 (816)
T 3qr0_A 650 GTIEIKIISAQFLSD-------KQISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRII 722 (816)
T ss_dssp EEEEEEEEEEECCCS-------SCCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEE
T ss_pred eEEEEEEEEcccCCC-------CCCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEE
Confidence 5789999999 5764 24799999998541 2479999986 699999998 9998 65 33589999
Q ss_pred EEeCCCCCCCCeeEEEEEECC
Q psy16330 80 LLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 80 v~~~~~~~~~~~iG~~~~~l~ 100 (101)
|||++ +++||++.++|+
T Consensus 723 V~D~d----ddfiG~~~ipL~ 739 (816)
T 3qr0_A 723 VSEEN----GKFIGHRVMPLD 739 (816)
T ss_dssp EEETT----SCEEEEEEEEST
T ss_pred EEecC----CCeeeEEEEEHH
Confidence 99975 689999999986
No 49
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=99.32 E-value=1.1e-11 Score=87.01 Aligned_cols=79 Identities=15% Similarity=0.239 Sum_probs=62.7
Q ss_pred cceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEECC-----cCceeee-eecC-CCCCeece-EEEE-EeC--CCCEEEE
Q psy16330 11 VLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYVDY-----KNPKTTR-VVKN-TYQPKWNE-EFTV-LVS--PYSIILF 78 (101)
Q Consensus 11 ~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~~~-----~~~~~T~-~~~~-~~~P~w~e-~~~~-~~~--~~~~l~~ 78 (101)
.+.|.|+|..| +|+. +..||||+|.+.+ ..+++|+ ++++ +.||.||| .|.| .+. ....|.|
T Consensus 677 ~~~L~V~Visa~~L~~-------~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~ 749 (799)
T 2zkm_X 677 ATTLSITVISGQFLSE-------RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRV 749 (799)
T ss_dssp CEEEEEEEEEEESCCS-------SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEE
T ss_pred eeeEEEEEEeccccCc-------cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEE
Confidence 35799999999 5764 2579999999843 1257899 7764 79999999 6999 775 3348999
Q ss_pred EEEeCCCCCCCCeeEEEEEECC
Q psy16330 79 RLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 79 ~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
.|||++ +++||++.++|+
T Consensus 750 ~V~D~d----~d~iG~~~ipl~ 767 (799)
T 2zkm_X 750 AVMEEG----NKFLGHRIIPIN 767 (799)
T ss_dssp EEEETT----TEEEEEEEEEGG
T ss_pred EEEEeC----CCccceEeeehh
Confidence 999986 689999999975
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.81 E-value=9e-08 Score=53.07 Aligned_cols=83 Identities=16% Similarity=0.123 Sum_probs=57.4
Q ss_pred ceEEEEEEeeEeCCCCCCCCCCCCCcEEEEEECCcC---ceee-eeecCCCCCeeceEEEEEeCCCCEEEEEEEeCCCCC
Q psy16330 12 LQLLQLVECAHLRRGGQGGGLLKPNPYIELYVDYKN---PKTT-RVVKNTYQPKWNEEFTVLVSPYSIILFRLLDHRTFR 87 (101)
Q Consensus 12 ~~l~v~i~~a~l~~~~~~~~~~~~dpy~~v~~~~~~---~~~T-~~~~~~~~P~w~e~~~~~~~~~~~l~~~v~~~~~~~ 87 (101)
.-|+|.+..+.+-.. .......||||.+.++... ..+| ...+++..|.|+++|...+.....|.+.|++...
T Consensus 6 ~flRi~~~~~~~~~~--~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V~~Gr~l~i~Vfh~a~-- 81 (126)
T 1yrk_A 6 PFLRIAFNSYELGSL--QAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHIYEGRVIQIVLMRAAE-- 81 (126)
T ss_dssp CEEEEEEEEEECSSC--CCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEECCTTCEEEEEEEEETT--
T ss_pred ccEEeeecccccccc--CCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeeeeCCEEEEEEEEcCCC--
Confidence 445666666543110 1111247999999875332 2355 4455699999999999999888999999996543
Q ss_pred CCCeeEEEEEECC
Q psy16330 88 RDCTIGEKRLNTS 100 (101)
Q Consensus 88 ~~~~iG~~~~~l~ 100 (101)
+|++.++++++
T Consensus 82 --~fvAn~tV~~e 92 (126)
T 1yrk_A 82 --EPVSEVTVGVS 92 (126)
T ss_dssp --EEEEEEEEEHH
T ss_pred --CeeeEEEEEHH
Confidence 79999998764
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.74 E-value=1.2e-07 Score=53.23 Aligned_cols=85 Identities=14% Similarity=0.064 Sum_probs=58.6
Q ss_pred cceEEEEEEeeEeCCCCCCCCCCCCCcEEEEEECCcC---ceee-eeecCCCCCeeceEEEEEeCCCCEEEEEEEeCCCC
Q psy16330 11 VLQLLQLVECAHLRRGGQGGGLLKPNPYIELYVDYKN---PKTT-RVVKNTYQPKWNEEFTVLVSPYSIILFRLLDHRTF 86 (101)
Q Consensus 11 ~~~l~v~i~~a~l~~~~~~~~~~~~dpy~~v~~~~~~---~~~T-~~~~~~~~P~w~e~~~~~~~~~~~l~~~v~~~~~~ 86 (101)
..-|+|......+-... .......||||.|.++... ..+| ...+++..|.|+++|...+.....|.|.|++...
T Consensus 9 ~~flRi~l~~~~~~~~~-~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V~~Gr~l~i~Vfh~a~- 86 (138)
T 2enj_A 9 SPFLRIGLSNFDCGSCQ-SCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHINKGRVMQIIVKGKNV- 86 (138)
T ss_dssp CCCEEEEEEEEECCCCC-CSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECCCSSCEEEEEEECSSC-
T ss_pred CcceEEEeeccccCCCC-CcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeEECCeEEEEEEEcCCC-
Confidence 34466666666432210 0012357999999876431 2566 4455689999999999888888999999996443
Q ss_pred CCCCeeEEEEEECC
Q psy16330 87 RRDCTIGEKRLNTS 100 (101)
Q Consensus 87 ~~~~~iG~~~~~l~ 100 (101)
+|++.++++++
T Consensus 87 ---~fVAn~tV~~e 97 (138)
T 2enj_A 87 ---DLISETTVELY 97 (138)
T ss_dssp ---SCCEEEEEESH
T ss_pred ---CeeeEEEEEHH
Confidence 79999999874
No 52
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=96.64 E-value=0.046 Score=33.20 Aligned_cols=53 Identities=13% Similarity=0.191 Sum_probs=41.0
Q ss_pred ceeeeeecCCCCCeeceEEEEEeC----CCCEEEEEEEeCCCC----CCCCeeEEEEEECC
Q psy16330 48 PKTTRVVKNTYQPKWNEEFTVLVS----PYSIILFRLLDHRTF----RRDCTIGEKRLNTS 100 (101)
Q Consensus 48 ~~~T~~~~~~~~P~w~e~~~~~~~----~~~~l~~~v~~~~~~----~~~~~iG~~~~~l~ 100 (101)
.++|.+...+.+|.|+|++.+.++ +...|.|+++....- .....+|-+.++|-
T Consensus 78 e~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~~~k~dk~E~pfg~a~lPL~ 138 (220)
T 3l4c_A 78 EYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSSQDSKDKSEKIFALAFVKLM 138 (220)
T ss_dssp CEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCCCSSCCCCCCEEEEEEEESB
T ss_pred eEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecccccccccCCeeEEEEEEcc
Confidence 478888888999999999999998 345899999875432 22347899988874
No 53
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=95.13 E-value=0.62 Score=34.67 Aligned_cols=85 Identities=14% Similarity=0.133 Sum_probs=52.0
Q ss_pred cceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEE--CCcC---ceeeeeecCCCCCeeceEEEEEeC-----CCCEEEEE
Q psy16330 11 VLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYV--DYKN---PKTTRVVKNTYQPKWNEEFTVLVS-----PYSIILFR 79 (101)
Q Consensus 11 ~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~--~~~~---~~~T~~~~~~~~P~w~e~~~~~~~-----~~~~l~~~ 79 (101)
...+.|+|..+ ++.. ......+.||.+.+ ++.. ...|... ...+|.|+|.+.|.+. ....|.|+
T Consensus 354 ~~~f~v~i~~~~~~n~----~~~~~~~~~V~~~l~hG~~~L~~~~~T~~~-~~~~~~Wne~l~f~i~i~dLPr~arL~~t 428 (1091)
T 3hhm_A 354 NSALRIKILCATYVNV----NIRDIDKIYVRTGIYHGGEPLCDNVNTQRV-PCSNPRWNEWLNYDIYIPDLPRAARLCLS 428 (1091)
T ss_dssp CSEEEEEEEEESCCCC----CCSSCCCCCEEEEEESSSCSSCCEECCCCC-CTTSCEEEEEEEEEEEGGGCCTTCEEEEE
T ss_pred CCCEEEEEEEecCCCC----CccccceEEEEEEEEECCEEccCceecccc-CCCCCCCCeeEEecCccccCChhcEEEEE
Confidence 45678888888 3432 11123466887765 3322 1233322 3457889999999875 46699999
Q ss_pred EEeCCCC----CCCCeeEEEEEECC
Q psy16330 80 LLDHRTF----RRDCTIGEKRLNTS 100 (101)
Q Consensus 80 v~~~~~~----~~~~~iG~~~~~l~ 100 (101)
+|+.... ..+..+|.+.++|-
T Consensus 429 l~~~~~~~~~~~~~~~lg~~n~~lf 453 (1091)
T 3hhm_A 429 ICSVKGRKGAKEEHCPLAWGNINLF 453 (1091)
T ss_dssp ECCCCCCC-------CCEEEEEESB
T ss_pred EEEecCccCcccccceeEEeeeeeE
Confidence 9986532 12357899988874
No 54
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=95.01 E-value=0.43 Score=34.92 Aligned_cols=84 Identities=12% Similarity=0.117 Sum_probs=52.7
Q ss_pred cceEEEEEEee-EeCCCCCCCCCCCCCcEEEEEE--CCcC---ceeeeeecCCCCCeeceEEEEEeC-----CCCEEEEE
Q psy16330 11 VLQLLQLVECA-HLRRGGQGGGLLKPNPYIELYV--DYKN---PKTTRVVKNTYQPKWNEEFTVLVS-----PYSIILFR 79 (101)
Q Consensus 11 ~~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~~--~~~~---~~~T~~~~~~~~P~w~e~~~~~~~-----~~~~l~~~ 79 (101)
...+.|+|..+ ++.. + ...+.|+.+.+ ++.. ...|..+.-..+|.|+|.+.|.+. ....|.|+
T Consensus 216 ~~~f~i~i~~~~~~~~----~--~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~t 289 (940)
T 2wxf_A 216 EQPFSIELIEGRKVNA----D--ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFA 289 (940)
T ss_dssp CSEEEEEEEEEECCCC---------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEE
T ss_pred CCceEEEEEEecccCC----C--CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEE
Confidence 45678888887 3432 1 23466777654 4321 244555544678999999999875 46699999
Q ss_pred EEeCCCC--C----------CCCeeEEEEEECC
Q psy16330 80 LLDHRTF--R----------RDCTIGEKRLNTS 100 (101)
Q Consensus 80 v~~~~~~--~----------~~~~iG~~~~~l~ 100 (101)
+|+...- + .+..+|.+.++|-
T Consensus 290 i~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~lF 322 (940)
T 2wxf_A 290 LYAVVEKAKKARSTKKKSKKADCPIAWANLMLF 322 (940)
T ss_dssp EEEEC----------------CEEEEEEEEESB
T ss_pred EEEecCCccCccccccccccccceEEEEeeeEE
Confidence 9985321 1 2348899888864
No 55
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=93.70 E-value=1 Score=33.16 Aligned_cols=86 Identities=7% Similarity=-0.034 Sum_probs=49.0
Q ss_pred ceEEEEEEeeEeCCCCCCCCCCCCCcEEEEEE--CCcC--ceeeeeecCCCCCeeceEEEEEeC-----CCCEEEEEEEe
Q psy16330 12 LQLLQLVECAHLRRGGQGGGLLKPNPYIELYV--DYKN--PKTTRVVKNTYQPKWNEEFTVLVS-----PYSIILFRLLD 82 (101)
Q Consensus 12 ~~l~v~i~~a~l~~~~~~~~~~~~dpy~~v~~--~~~~--~~~T~~~~~~~~P~w~e~~~~~~~-----~~~~l~~~v~~ 82 (101)
..+.|+|..++.+.. .. ....+.|+.+.+ ++.. ..+|..+.-+.+|.|+|.+.|.+. ....|.|++|+
T Consensus 218 ~~f~i~i~~~~~~~~--~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~ 294 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVL--PR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYC 294 (961)
T ss_dssp SEEEEEEEEEECSSC--CT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEE
T ss_pred CceEEEEeecccccc--cC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEe
Confidence 456677766642110 01 123456766643 4322 133444444667999999999775 46689999997
Q ss_pred CCCC----------------CCCCeeEEEEEECC
Q psy16330 83 HRTF----------------RRDCTIGEKRLNTS 100 (101)
Q Consensus 83 ~~~~----------------~~~~~iG~~~~~l~ 100 (101)
.... +....+|.+.++|-
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~lg~~n~~lf 328 (961)
T 1e7u_A 295 GAKPALSGKTSAEMPSPESKGKAQLLYYVNLLLI 328 (961)
T ss_dssp EEC--------------------CEEEEEEEESB
T ss_pred cccCccccccccccccccccccceeEEEEeeeee
Confidence 4321 12347899888764
No 56
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=89.17 E-value=1.5 Score=32.81 Aligned_cols=66 Identities=8% Similarity=0.045 Sum_probs=40.9
Q ss_pred ceEEEEEEee-EeCCCCCCCCCCCCCcEEEEE--ECCcC---ceeeeeecCCCCCeeceEEEEEeC-----CCCEEEEEE
Q psy16330 12 LQLLQLVECA-HLRRGGQGGGLLKPNPYIELY--VDYKN---PKTTRVVKNTYQPKWNEEFTVLVS-----PYSIILFRL 80 (101)
Q Consensus 12 ~~l~v~i~~a-~l~~~~~~~~~~~~dpy~~v~--~~~~~---~~~T~~~~~~~~P~w~e~~~~~~~-----~~~~l~~~v 80 (101)
..+.|+|..+ ++.. + ...+.|+.+. -++.. ...|..+.-+.+|.|+|.+.|.+. ....|.|++
T Consensus 353 ~~f~i~i~~~~~~~~----~--~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti 426 (1092)
T 2y3a_A 353 NPFQITLVKGNKLNT----E--ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAV 426 (1092)
T ss_dssp SEEEEEECCCCCCCC----C--SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEEC
T ss_pred CCEEEEEEEeccCCC----C--CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEE
Confidence 4567777776 3432 1 2245565543 34321 234444444678999999999875 456899999
Q ss_pred EeC
Q psy16330 81 LDH 83 (101)
Q Consensus 81 ~~~ 83 (101)
|+.
T Consensus 427 ~~~ 429 (1092)
T 2y3a_A 427 YAV 429 (1092)
T ss_dssp CCC
T ss_pred EEe
Confidence 985
No 57
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=73.32 E-value=10 Score=21.72 Aligned_cols=90 Identities=14% Similarity=0.004 Sum_probs=53.3
Q ss_pred ccccceEEEEEEeeEeCCCCCCCCCCCCCcEEEEEEC--CcCceeeeeecCCCCCeeceEEEEEeCC---------CCEE
Q psy16330 8 FSSVLQLLQLVECAHLRRGGQGGGLLKPNPYIELYVD--YKNPKTTRVVKNTYQPKWNEEFTVLVSP---------YSII 76 (101)
Q Consensus 8 ~~~~~~l~v~i~~a~l~~~~~~~~~~~~dpy~~v~~~--~~~~~~T~~~~~~~~P~w~e~~~~~~~~---------~~~l 76 (101)
.+.-+-+++.|..+.+.+.-. ...+..+|..-..++ ....+.|.+.. +.+|.++.+-.+.+.. ...+
T Consensus 14 ~~gEnlfEihi~~~~~~~~~l-~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l 91 (156)
T 2yrb_A 14 ERGENLFEIHINKVTFSSEVL-QASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTI 91 (156)
T ss_dssp CSSCEEEEEEEEEECCCHHHH-HHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCE
T ss_pred cCCCcEEEEEEeEEEEcHHHH-hhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCE
Confidence 345566778887775432100 001223565444443 22235666665 7899999888777752 3478
Q ss_pred EEEEEeCCCCCCCCeeEEEEEECC
Q psy16330 77 LFRLLDHRTFRRDCTIGEKRLNTS 100 (101)
Q Consensus 77 ~~~v~~~~~~~~~~~iG~~~~~l~ 100 (101)
.++++.... ...+.+|.+++++.
T Consensus 92 ~lELhqa~g-~~~~tla~~~I~l~ 114 (156)
T 2yrb_A 92 TLEVHQAYS-TEYETIAACQLKFH 114 (156)
T ss_dssp EEEEEEECS-SCEEEEEEEEECCS
T ss_pred EEEEEEeeC-CCceEEEEEEEEhH
Confidence 888877542 24568999999875
Done!