Query psy16332
Match_columns 359
No_of_seqs 231 out of 574
Neff 6.7
Searched_HMMs 13730
Date Fri Aug 16 18:42:22 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16332.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/16332hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2pr9a1 b.2.7.1 (A:159-435) Se 99.8 1.7E-20 1.3E-24 175.6 14.9 151 129-287 90-246 (277)
2 d2vglm2 d.110.4.2 (M:1-141) Mu 99.7 3E-17 2.2E-21 138.6 10.9 84 40-128 1-88 (141)
3 d2vgls_ d.110.4.2 (S:) Sigma2 99.6 3.2E-15 2.3E-19 126.3 11.9 88 40-128 1-90 (142)
4 d2pr9a1 b.2.7.1 (A:159-435) Se 99.5 2.7E-14 2E-18 132.9 15.1 184 163-357 2-240 (277)
5 d3cpta1 d.110.7.1 (A:3-118) ME 89.0 1.2 8.9E-05 34.3 9.2 83 43-126 19-109 (116)
6 d1ioua_ d.110.4.1 (A:) Synapto 57.2 18 0.0013 27.8 7.8 84 45-128 7-100 (140)
7 d1vetb_ d.110.7.1 (B:) Late en 42.1 59 0.0043 23.8 11.3 84 43-127 21-113 (118)
8 d2fh5a1 d.110.4.4 (A:1-129) Si 38.0 21 0.0015 27.3 5.0 68 41-111 2-72 (129)
9 d1ix2a_ b.1.18.17 (A:) Copper 25.1 26 0.0019 25.1 3.3 26 302-334 76-101 (102)
10 d1ypra_ d.110.1.1 (A:) Profili 24.9 1E+02 0.0076 22.5 7.1 62 45-109 19-81 (125)
11 d1j3wa_ d.110.7.1 (A:) Giding 24.6 1.3E+02 0.0093 22.3 9.7 84 43-127 26-122 (134)
12 d2vgls_ d.110.4.2 (S:) Sigma2 23.4 14 0.00099 28.4 1.5 30 8-37 97-126 (142)
No 1
>d2pr9a1 b.2.7.1 (A:159-435) Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.83 E-value=1.7e-20 Score=175.58 Aligned_cols=151 Identities=19% Similarity=0.308 Sum_probs=117.2
Q ss_pred cCcccchhhhccccEEEecCCCCCCCCCCCeeeEEEeecCCCCcccceEEEEeeCCCCCCceEEEEEEEEecC-ccceee
Q psy16332 129 THPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSGGCDVNIEYELEHE-EKELNQ 207 (359)
Q Consensus 129 tHP~VdK~~f~~~~ii~~k~~~k~Fp~~~~~gvlkWR~~~~~e~~lPlsV~~w~s~~~~~~~~v~iEye~~~~-~~~l~d 207 (359)
||||||++.|+++++|+|+||||.|++ |+||... +..+|+.+.+|+...++++.++.++++.... ...++|
T Consensus 90 fH~cV~~~~f~~~~~i~F~PPdG~F~L------m~Y~~~~--~~~~P~~i~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~ 161 (277)
T d2pr9a1 90 FHQCVRLSKFDSERSISFIPPDGEFEL------MRYRTTK--DIILPFRVIPLVREVGRTKLEVKVVIKSNFKPSLLAQK 161 (277)
T ss_dssp ECTTSBCC-----CCEEECCCSEEEEE------EEEEECS--SCCCCEEEEEEEEEETTTEEEEEEEEEECSCTTCEEEE
T ss_pred eeeccccccccccceEeecCCCCcEEE------EEEEcCC--CcCCCcEEEEEEEeccCcEEEEEEEEEeccCCCeeeeE
Confidence 899999999999999999999999987 9999875 4458999999998766556777777776432 357999
Q ss_pred eEEEeeCCCC-CCCceeeCCceEEEeCCCCeEEEEEeeecCCCc-eeEEEEEeecC---CCCCcccEEEEEEeccceeee
Q psy16332 208 VTISIPLPLH-CTPNVTECDGDYNYDARKNTLTWSLALIDSSNK-SGALEFSAPSA---SQSDFFPLQVSFSCNQSYANI 282 (359)
Q Consensus 208 V~i~IPlp~~-~~~~v~~~dG~~~~d~~~~~L~W~I~~id~~~~-sgsleFsv~~~---d~d~~fPI~V~F~~~~s~s~v 282 (359)
|.|.||+|+. ..+.+.+..|+++|+...+.+.|+|+++++++. +.+.+++.... ....++||+|+|+++.+++|+
T Consensus 162 v~I~iP~P~~~~~~~~~~~~G~~~y~~~~~~l~W~I~k~~~~~~~~l~~~~~~~~~~~~~~~~~~pi~v~F~ip~t~Sgl 241 (277)
T d2pr9a1 162 IEVRIPTPLNTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKWARPPISMNFEVPFAPSGL 241 (277)
T ss_dssp EEEEEECCTTEEEEEEEESSSEEEEEGGGTEEEEEEEEEETTCEEEEEEEEEECCCCSSSCCCCCCEEEEEEESSCTTCC
T ss_pred EEEEeeCCCcccCceEEecCceEEEeccCCEEEEecccccCCccceEEEEEEeccCCCCccccCCcEEEEEEecccccce
Confidence 9999999984 467788899999999999999999999986432 33444444322 234588999999998888998
Q ss_pred EEEEe
Q psy16332 283 KIFIE 287 (359)
Q Consensus 283 ~V~iP 287 (359)
+|..=
T Consensus 242 ~V~~l 246 (277)
T d2pr9a1 242 KVRYL 246 (277)
T ss_dssp CEEEE
T ss_pred EEEEE
Confidence 88654
No 2
>d2vglm2 d.110.4.2 (M:1-141) Mu2 adaptin (clathrin coat assembly protein AP50) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.70 E-value=3e-17 Score=138.61 Aligned_cols=84 Identities=13% Similarity=0.154 Sum_probs=77.9
Q ss_pred eceeEEEeecCCceeEEeeccc-ccchhHHHHHHhhhhhhhcC---CCccceEEeCCEEEEEEEcCCEEEEEEecCCccH
Q psy16332 40 AQEATKIKLKNIKIAIVSRQFV-EMTRARIEGLLAAFPKLMSS---GKQHTFVETDSVRYVYQPLEKLYMLLITTKTSNI 115 (359)
Q Consensus 40 ~~s~~~i~~~~Gk~~LisRq~r-di~r~~ie~~l~~F~~li~~---~~~~t~ve~~~vryvY~~~~~lYl~~iT~~nsNi 115 (359)
|+||++|+|++|| +|++|+|| |++|+.++ .|++.+.+ +..+|+++.++++|+|+++++||++++|+.|.|+
T Consensus 1 MI~~i~Iln~~G~-~l~~r~y~~~~~~~~~~----~f~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~l~~v~v~~~~~n~ 75 (141)
T d2vglm2 1 MIGGLFIYNHKGE-VLISRVYRDDIGRNAVD----AFRVNVIHARQQVRSPVTNIARTSFFHVKRSNIWLAAVTKQNVNA 75 (141)
T ss_dssp CCCEEEEECTTCC-EEEEEECSSSCCHHHHH----HHHHHTTTCSSCCCCSEEEETTEEEEEEEETTEEEEEEESSCCCH
T ss_pred CceEEEEEcCCCC-EEEEEecCCCCChHHHH----HHHHHHHhccccCCCCeEEECCEEEEEEEECCEEEEEEecCCCCH
Confidence 6789999999999 99999999 99998777 88888764 3467999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhc
Q psy16332 116 LEDLETLRLFSRV 128 (359)
Q Consensus 116 ~~~l~~L~~l~~v 128 (359)
++.+++||+++++
T Consensus 76 l~~~e~L~~~~~~ 88 (141)
T d2vglm2 76 AMVFEFLYKMCDV 88 (141)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999999
No 3
>d2vgls_ d.110.4.2 (S:) Sigma2 adaptin (clathrin coat assembly protein AP17) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.59 E-value=3.2e-15 Score=126.34 Aligned_cols=88 Identities=18% Similarity=0.299 Sum_probs=82.6
Q ss_pred eceeEEEeecCCceeEEeecccccchhHHHHHHhhhhhhhcC--CCccceEEeCCEEEEEEEcCCEEEEEEecCCccHHH
Q psy16332 40 AQEATKIKLKNIKIAIVSRQFVEMTRARIEGLLAAFPKLMSS--GKQHTFVETDSVRYVYQPLEKLYMLLITTKTSNILE 117 (359)
Q Consensus 40 ~~s~~~i~~~~Gk~~LisRq~rdi~r~~ie~~l~~F~~li~~--~~~~t~ve~~~vryvY~~~~~lYl~~iT~~nsNi~~ 117 (359)
|++|+.|+|++|| ++++|+|+..++.+...+...|.+++.+ +.++|+++.++++|+|+++++||++++|+.|.|++.
T Consensus 1 MI~~i~i~n~~G~-~~l~K~Y~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~vy~~~~~l~~v~~~~~~~n~l~ 79 (142)
T d2vgls_ 1 MIRFILIQNRAGK-TRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNLA 79 (142)
T ss_dssp CEEEEEEEETTSC-EEEEEECSCCCHHHHHHHHHHHHHHHHTCCTTSCSEEEETTEEEEEEEETTEEEEEEECTTSCHHH
T ss_pred CeEEEEEEcCCCC-EEEEEeCCCCCHHHHHHHHHHHHHHhhcCCCCCCceEEECCEEEEEEEECCEEEEEEECCCccHHH
Confidence 5688999999999 9999999999999999999999999875 346699999999999999999999999999999999
Q ss_pred HHHHHHHhhhc
Q psy16332 118 DLETLRLFSRV 128 (359)
Q Consensus 118 ~l~~L~~l~~v 128 (359)
++++||+++++
T Consensus 80 ~~e~L~~~~~~ 90 (142)
T d2vgls_ 80 YLEAIHNFVEV 90 (142)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999998
No 4
>d2pr9a1 b.2.7.1 (A:159-435) Second domain of Mu2 adaptin subunit (ap50) of ap2 adaptor {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=99.55 E-value=2.7e-14 Score=132.89 Aligned_cols=184 Identities=14% Similarity=0.188 Sum_probs=131.9
Q ss_pred EEeecCC----CCcccce--EEEEeeCCCCCC-ceEEEEEEEEecC----------------------------------
Q psy16332 163 KWRFTST----DESCLPL--SINCWPSDNGSG-GCDVNIEYELEHE---------------------------------- 201 (359)
Q Consensus 163 kWR~~~~----~e~~lPl--sV~~w~s~~~~~-~~~v~iEye~~~~---------------------------------- 201 (359)
.||..+. ||.++++ .+++.++.+|.. .++|.+++.++..
T Consensus 2 ~WR~~~i~y~~NEi~vDV~E~i~~~~~~~G~~~~~~V~G~I~~~s~LsG~P~~~l~Ln~~~~~~~~~~~~~~~~~~~~~~ 81 (277)
T d2pr9a1 2 GWRREGIKYRRNELFLDVLESVNLLMSPQGQVLSAHVSGRVVMKSYLSGMPECKFGMNDKIVIEKQGKGTADETSKSGKQ 81 (277)
T ss_dssp TTSCSCCCCSSCEEEEEEEEEEEEEECTTSCEEEEEEEEEEEEEEECSSSCEEEEEESBC------------------CC
T ss_pred CccCCCCcccCCEEEEEEEEEEEEEECCCCCEEEEEEEEEEEEEEecCCCCeEEEEecchhhcccccccccccccccccC
Confidence 4887764 9999999 999999988754 7889999987540
Q ss_pred ccceeeeEE--EeeCCC-CCCC--ceeeCCceEEEeCCCCeEEEEEeeecCCCceeEEEEEeecC-CCCCcccEEEEEEe
Q psy16332 202 EKELNQVTI--SIPLPL-HCTP--NVTECDGDYNYDARKNTLTWSLALIDSSNKSGALEFSAPSA-SQSDFFPLQVSFSC 275 (359)
Q Consensus 202 ~~~l~dV~i--~IPlp~-~~~~--~v~~~dG~~~~d~~~~~L~W~I~~id~~~~sgsleFsv~~~-d~d~~fPI~V~F~~ 275 (359)
.+.|+|+.| ||.+.. ..+. .+.++||.|.+ +.|++.. +...++.+..+.. ..++.+-+.++++.
T Consensus 82 ~~~l~d~~fH~cV~~~~f~~~~~i~F~PPdG~F~L------m~Y~~~~----~~~~P~~i~~~~~~~~~~~~~~~i~l~~ 151 (277)
T d2pr9a1 82 SIAIDDCTFHQCVRLSKFDSERSISFIPPDGEFEL------MRYRTTK----DIILPFRVIPLVREVGRTKLEVKVVIKS 151 (277)
T ss_dssp CBCCSEEEECTTSBCC-----CCEEECCCSEEEEE------EEEEECS----SCCCCEEEEEEEEEETTTEEEEEEEEEE
T ss_pred ceEccceeeeeccccccccccceEeecCCCCcEEE------EEEEcCC----CcCCCcEEEEEEEeccCcEEEEEEEEEe
Confidence 125788998 888866 4433 34999999874 7777642 2344555544332 22334556666655
Q ss_pred ----ccceeeeEEEEeecccccCCCceeeecceEEEeCCCCEEEEEEeeEcCCC-CeEEEEEEccCC---CCCCccceEE
Q psy16332 276 ----NQSYANIKIFIEKLFLLHCTPNVTECDGDYNYDARKNTLTWSLALIDSSN-KSGALEFSAPSA---SQSDFFPLQV 347 (359)
Q Consensus 276 ----~~s~s~v~V~iP~~~~~~~~P~V~~~dG~y~y~~~~~~l~W~I~~i~~~~-~sgs~eF~~~~~---~~~~fFPi~V 347 (359)
...+.+|.|.+|.|. .+..+.+....|+++|+..+++++|+|+.+++++ .+++++|++++. ....++||+|
T Consensus 152 ~~~~~~~~~~v~I~iP~P~-~~~~~~~~~~~G~~~y~~~~~~l~W~I~k~~~~~~~~l~~~~~~~~~~~~~~~~~~pi~v 230 (277)
T d2pr9a1 152 NFKPSLLAQKIEVRIPTPL-NTSGVQVICMKGKAKYKASENAIVWKIKRMAGMKESQISAEIELLPTNDKKKWARPPISM 230 (277)
T ss_dssp CSCTTCEEEEEEEEEECCT-TEEEEEEEESSSEEEEEGGGTEEEEEEEEEETTCEEEEEEEEEECCCCSSSCCCCCCEEE
T ss_pred ccCCCeeeeEEEEEeeCCC-cccCceEEecCceEEEeccCCEEEEecccccCCccceEEEEEEeccCCCCccccCCcEEE
Confidence 246789999999887 5667888888999999999999999999998877 777777777542 2334999999
Q ss_pred EEeeceeccc
Q psy16332 348 SFSCNQSYAN 357 (359)
Q Consensus 348 ~F~s~~~~~~ 357 (359)
+|+-..++.+
T Consensus 231 ~F~ip~t~Sg 240 (277)
T d2pr9a1 231 NFEVPFAPSG 240 (277)
T ss_dssp EEEESSCTTC
T ss_pred EEEecccccc
Confidence 9987554444
No 5
>d3cpta1 d.110.7.1 (A:3-118) MEK binding partner 1, MP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.02 E-value=1.2 Score=34.27 Aligned_cols=83 Identities=11% Similarity=0.079 Sum_probs=62.0
Q ss_pred eEEEeecCCceeEEeecccccchhHH-HHHHhhhhhhhcC------CCcc-ceEEeCCEEEEEEEcCCEEEEEEecCCcc
Q psy16332 43 ATKIKLKNIKIAIVSRQFVEMTRARI-EGLLAAFPKLMSS------GKQH-TFVETDSVRYVYQPLEKLYMLLITTKTSN 114 (359)
Q Consensus 43 ~~~i~~~~Gk~~LisRq~rdi~r~~i-e~~l~~F~~li~~------~~~~-t~ve~~~vryvY~~~~~lYl~~iT~~nsN 114 (359)
|++|.|+.|= |+++=---+.++... .++++.|.....+ |+.. .+...++..++-.....+|+..++.+++|
T Consensus 19 ~I~iTDrDGV-pv~~v~~~~~p~~~~~~~~lstf~~a~dq~sKLglg~~ksii~~Y~~~qvv~~~~~pl~vt~ia~~~aN 97 (116)
T d3cpta1 19 AIVVSDRDGV-PVIKVANDNAPEHALRPGFLSTFALATDQGSKLGLSKNKSIICYYNTYQVVQFNRLPLVVSFIASSSAN 97 (116)
T ss_dssp EEEEECTTSC-EEEEEECTTSCGGGGSHHHHHHHHHHHHHHHHHTCCCEEEEEEECSSEEEEEEEETTEEEEEEEETTSC
T ss_pred EEEEEcCCCc-EEEEecCCCChhhhcchHHHHHHHHHHHhhcccCCCCCcEEEEEecCeEEEEEecCceEEEEEecCCCC
Confidence 4599999997 776654445555333 3788899888765 4433 55566888999999999999999999999
Q ss_pred HHHHHHHHHHhh
Q psy16332 115 ILEDLETLRLFS 126 (359)
Q Consensus 115 i~~~l~~L~~l~ 126 (359)
+=..+..-..+.
T Consensus 98 tG~Il~l~~~l~ 109 (116)
T d3cpta1 98 TGLIVSLEKELA 109 (116)
T ss_dssp HHHHHHHHHHHH
T ss_pred hHHHHHHHHHHH
Confidence 988777666554
No 6
>d1ioua_ d.110.4.1 (A:) Synaptobrevin homolog 1 ykt6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=57.16 E-value=18 Score=27.80 Aligned_cols=84 Identities=17% Similarity=0.221 Sum_probs=57.7
Q ss_pred EEeecCCceeEEeecccccc------hhHHHHHHhhhhhhhcC----CCccceEEeCCEEEEEEEcCCEEEEEEecCCcc
Q psy16332 45 KIKLKNIKIAIVSRQFVEMT------RARIEGLLAAFPKLMSS----GKQHTFVETDSVRYVYQPLEKLYMLLITTKTSN 114 (359)
Q Consensus 45 ~i~~~~Gk~~LisRq~rdi~------r~~ie~~l~~F~~li~~----~~~~t~ve~~~vryvY~~~~~lYl~~iT~~nsN 114 (359)
+|+-.++..+++=-+-.|++ |+-+.+.+.-.-+.|.+ |..+++-+.+.+-++|..-++|-.+++|.+.=-
T Consensus 7 ~v~~~~~~~~~~L~~a~Dlssf~ffqR~svkE~~~f~sr~i~~Rt~~g~r~sv~~~~y~~h~yv~~~gl~~l~i~d~~Yp 86 (140)
T d1ioua_ 7 GVFRSGGEKALELSEVKDLSQFGFFERSSVGQFMTFFAETVASRTGAGERQSIEEGNYIGHVYARSEGICGVLITDKQYP 86 (140)
T ss_dssp EEEEEETTEEEEEEEEECCSSCCTTHHHHHHHHHHHHHHHHHHHCCSSSEEEEEETTEEEEEECCSSSCEEEEEBCTTSC
T ss_pred EEEEcCCCCcEEEeeeccccccceeehHhHHHHHHHHHHHHhhcCCCCceEEEEcCCeEEEEEEeeCCEEEEEEECCCcc
Confidence 66654333255445555775 77777777444444543 444565555556777998899999999999988
Q ss_pred HHHHHHHHHHhhhc
Q psy16332 115 ILEDLETLRLFSRV 128 (359)
Q Consensus 115 i~~~l~~L~~l~~v 128 (359)
.--.+.+|..+.+-
T Consensus 87 ~r~AF~~L~~i~~e 100 (140)
T d1ioua_ 87 VRPAYTLLNKILDE 100 (140)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHH
Confidence 88899999987766
No 7
>d1vetb_ d.110.7.1 (B:) Late endosomal/lysosomal Mp1 interacting protein p14 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=42.12 E-value=59 Score=23.81 Aligned_cols=84 Identities=5% Similarity=0.000 Sum_probs=57.6
Q ss_pred eEEEeecCCceeEEeecccccchhHHHHHHhhhhhhhcC--------CC-ccceEEeCCEEEEEEEcCCEEEEEEecCCc
Q psy16332 43 ATKIKLKNIKIAIVSRQFVEMTRARIEGLLAAFPKLMSS--------GK-QHTFVETDSVRYVYQPLEKLYMLLITTKTS 113 (359)
Q Consensus 43 ~~~i~~~~Gk~~LisRq~rdi~r~~ie~~l~~F~~li~~--------~~-~~t~ve~~~vryvY~~~~~lYl~~iT~~ns 113 (359)
+..++++.|. ++-+...-++..+++-...+.+..+... |. +-..+|.++=..+-.+..+.++++++.+.+
T Consensus 21 ~avlvs~DGl-~ia~~~~~~~d~~~lAAi~a~~l~~~~~~a~~~~~~G~~~qviie~~~G~l~i~~~g~~~L~vla~~~~ 99 (118)
T d1vetb_ 21 STLLLNNEGS-LLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDSLKFILMDCMEGRVAITRVANLLLCMYAKETV 99 (118)
T ss_dssp EEEEECTTCC-EEEEEECCSSCHHHHHHHHHHHHHHHHHHHCCTTTCCCCCEEEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred EEEEECCCCC-eeeecCCCccCHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEEcCCCEEEEEEcccCeEEEEecCCC
Confidence 3389999998 7755433378877777777777665532 21 336677766555556778899999999999
Q ss_pred cHHHHHHHHHHhhh
Q psy16332 114 NILEDLETLRLFSR 127 (359)
Q Consensus 114 Ni~~~l~~L~~l~~ 127 (359)
|.=..---++++++
T Consensus 100 ~lGll~~e~~~~~~ 113 (118)
T d1vetb_ 100 GFGMLKAKAQALVQ 113 (118)
T ss_dssp CHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHH
Confidence 97666555555543
No 8
>d2fh5a1 d.110.4.4 (A:1-129) Signal recognition particle receptor alpha subunit, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.04 E-value=21 Score=27.31 Aligned_cols=68 Identities=13% Similarity=0.087 Sum_probs=43.3
Q ss_pred ceeEEEeecCCceeEEeeccc-ccchhHHHHHHhhhhhhhcCCCccceEEeCCEEEEEEEcCC--EEEEEEecC
Q psy16332 41 QEATKIKLKNIKIAIVSRQFV-EMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEK--LYMLLITTK 111 (359)
Q Consensus 41 ~s~~~i~~~~Gk~~LisRq~r-di~r~~ie~~l~~F~~li~~~~~~t~ve~~~vryvY~~~~~--lYl~~iT~~ 111 (359)
+-.+.|.+++|= +|=+.+.- +...+.|.+|+.. -++++....+.+..|+.+.-|.-.++ |-++++=.+
T Consensus 2 iD~f~IftkGGi-VLW~~~~~~~~~~~~IN~LI~~--vlLEER~~~~~~~~d~y~lkw~~~Ne~~lvfV~vYQ~ 72 (129)
T d2fh5a1 2 VDFFTIFSKGGL-VLWCFQGVSDSCTGPVNALIRS--VLLQERGGNNSFTHEALTLKYKLDNQFELVFVVGFQK 72 (129)
T ss_dssp CSEEEEEETTSB-EEEEEBTTTBSCCCHHHHHHHH--TGGGC-------CCCCCEEEEEEETTTTEEEEEEESC
T ss_pred ccEEEEEeCCeE-EEEeecCCCcccchhHHHHHHH--hheecccCCCceeECCEEEEEEEeccCCEEEEEEEhh
Confidence 346799999998 99987755 8888888866632 12344222344566898888888886 445555444
No 9
>d1ix2a_ b.1.18.17 (A:) Copper resistance protein C (CopC, PcoC) {Escherichia coli [TaxId: 562]}
Probab=25.05 E-value=26 Score=25.11 Aligned_cols=26 Identities=23% Similarity=0.571 Sum_probs=22.2
Q ss_pred cceEEEeCCCCEEEEEEeeEcCCCCeEEEEEEc
Q psy16332 302 DGDYNYDARKNTLTWSLALIDSSNKSGALEFSA 334 (359)
Q Consensus 302 dG~y~y~~~~~~l~W~I~~i~~~~~sgs~eF~~ 334 (359)
.|.|. +.|++-.-||.--+|++.|++
T Consensus 76 ~G~Y~-------V~wrv~s~DGH~~~G~~~F~V 101 (102)
T d1ix2a_ 76 AGTYR-------VDWRAVSSDTHPITGNYTFTV 101 (102)
T ss_dssp SEEEE-------EEEEECCTTCCCEEEEEEEEE
T ss_pred CceEE-------EEEEEEcCCCCeeccEEEEEE
Confidence 47775 799998888888999999997
No 10
>d1ypra_ d.110.1.1 (A:) Profilin (actin-binding protein) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.89 E-value=1e+02 Score=22.52 Aligned_cols=62 Identities=10% Similarity=0.053 Sum_probs=42.2
Q ss_pred EEeecCCceeEEeeccc-ccchhHHHHHHhhhhhhhcCCCccceEEeCCEEEEEEEcCCEEEEEEe
Q psy16332 45 KIKLKNIKIAIVSRQFV-EMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLLIT 109 (359)
Q Consensus 45 ~i~~~~Gk~~LisRq~r-di~r~~ie~~l~~F~~li~~~~~~t~ve~~~vryvY~~~~~lYl~~iT 109 (359)
+|+...|. .+-+..=- .++.+++..+++.|-..- .....=+..+|.+|+..+.|+=.+.+..
T Consensus 19 aI~g~dg~-svwA~S~gf~~~~~E~~~i~~~f~~~~--~~~~~Gi~i~G~KY~~~~~d~~~i~~kk 81 (125)
T d1ypra_ 19 VIYSRAGD-AVWATSGGLSLQPNEIGEIVQGFDNPA--GLQSNGLHIQGQKFMLLRADDRSIYGRH 81 (125)
T ss_dssp EEEETTSC-CEEEEESCCCCCHHHHHHHHHHTTCTH--HHHHHCEEETTEEEEEEEECSSEEEEEE
T ss_pred EEEeCCCC-eeEEECCCCCCCHHHHHHHHHHhcCcc--hhccCCEEEcCeEEEEEecCCCeEEEEe
Confidence 89999997 66555433 588899998888773211 0022347889999999998886555443
No 11
>d1j3wa_ d.110.7.1 (A:) Giding protein MglB {Thermus thermophilus [TaxId: 274]}
Probab=24.63 E-value=1.3e+02 Score=22.28 Aligned_cols=84 Identities=11% Similarity=0.091 Sum_probs=48.4
Q ss_pred eEEEeecCCceeEEeec--c--cccchhHHHHHHh-------hhhhhhcCCC-ccceEEeCCEEEEEEEcC-CEEEEEEe
Q psy16332 43 ATKIKLKNIKIAIVSRQ--F--VEMTRARIEGLLA-------AFPKLMSSGK-QHTFVETDSVRYVYQPLE-KLYMLLIT 109 (359)
Q Consensus 43 ~~~i~~~~Gk~~LisRq--~--rdi~r~~ie~~l~-------~F~~li~~~~-~~t~ve~~~vryvY~~~~-~lYl~~iT 109 (359)
+..++|+.|. +|-+.- . .++..+++-++.+ ..-+.+..+. +.-++|.++-...-.+.+ +.+|++++
T Consensus 26 ~a~lvs~dGl-~ia~~~~~~~~~~~d~~~lAA~~a~~~~~~~~~a~~l~~g~~~~~~ie~~~g~v~i~~~g~~~~L~vl~ 104 (134)
T d1j3wa_ 26 YALLIDRKGF-VLAHKEALWAPKPPPLDTLATLVAGNAAATQALAKLLGEARFQEEVHQGERMGLYVDEAGEHALLVLVF 104 (134)
T ss_dssp EEEEEETTSC-EEEEEECTTSCCCSCHHHHHHHHHHHHHHTHHHHHHTTCSSCSEEEEECSSCEEEEEESSTTEEEEEEE
T ss_pred EEEEECCCCc-EEEeecCcCCCccccHHHHHHHHHHHHHHHHHHHHHhcCCChhheeEEcCCcEEEEEEeCCCcEEEEEe
Confidence 3489999997 554431 1 1233333333332 2222222232 447788777444445554 58999999
Q ss_pred cCCccHHHHHHHHHHhhh
Q psy16332 110 TKTSNILEDLETLRLFSR 127 (359)
Q Consensus 110 ~~nsNi~~~l~~L~~l~~ 127 (359)
.+++|.=...-.+++.++
T Consensus 105 ~~~~~LG~v~~~~~~a~~ 122 (134)
T d1j3wa_ 105 DETAPLGKVKLHGKRASE 122 (134)
T ss_dssp CTTSCHHHHHHHHHHHHH
T ss_pred CCCCChhhHHHHHHHHHH
Confidence 999997666666665543
No 12
>d2vgls_ d.110.4.2 (S:) Sigma2 adaptin (clathrin coat assembly protein AP17) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=23.45 E-value=14 Score=28.41 Aligned_cols=30 Identities=17% Similarity=0.139 Sum_probs=26.5
Q ss_pred cCChhhHhhhhhhhhhhHHHHHhhhcccee
Q psy16332 8 FMDENEVTDNAFSLIFAFDEIVALGYRESV 37 (359)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 37 (359)
.++|+.|.+|...+...+||++..|+....
T Consensus 97 ~~~e~~i~~n~~~v~~~lDE~id~G~~~et 126 (142)
T d2vgls_ 97 NVCELDLVFNFYKVYTVVDEMFLAGEIRET 126 (142)
T ss_dssp SCCHHHHHHTHHHHHHHHHHHEETTEECCC
T ss_pred ccCHHHHHhHHHHHHHHHHHHHhCCeeEeC
Confidence 489999999999999999999999986543
Done!