Your job contains 1 sequence.
>psy16332
MSLLDGLFMDENEVTDNAFSLIFAFDEIVALGYRESVNLAQEATKIKLKNIKIAIVSRQF
VEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLLITTKTSNILEDLE
TLRLFSRVTHPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINC
WPSDNGSGGCDVNIEYELEHEEKELNQVTISIPLPLHCTPNVTECDGDYNYDARKNTLTW
SLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQSYANIKIFIEKLFLLHCTPNVTE
CDGDYNYDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQSYANIK
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy16332
(359 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0028969 - symbol:deltaCOP "delta-coatomer protein"... 519 1.3e-84 2
MGI|MGI:2387591 - symbol:Arcn1 "archain 1" species:10090 ... 462 4.6e-78 2
RGD|1359110 - symbol:Arcn1 "archain 1" species:10116 "Rat... 462 4.6e-78 2
UNIPROTKB|P53619 - symbol:ARCN1 "Coatomer subunit delta" ... 456 2.0e-77 2
UNIPROTKB|B0YIW6 - symbol:ARCN1 "Archain 1, isoform CRA_a... 456 2.0e-77 2
UNIPROTKB|P48444 - symbol:ARCN1 "Coatomer subunit delta" ... 456 2.0e-77 2
UNIPROTKB|F1PRT4 - symbol:ARCN1 "Uncharacterized protein"... 455 2.5e-77 2
UNIPROTKB|I3LBY0 - symbol:ARCN1 "Uncharacterized protein"... 455 2.5e-77 2
ZFIN|ZDB-GENE-040121-7 - symbol:arcn1b "archain 1b" speci... 448 4.1e-77 2
UNIPROTKB|Q5ZL57 - symbol:ARCN1 "Coatomer subunit delta" ... 449 1.1e-76 2
ZFIN|ZDB-GENE-021031-2 - symbol:arcn1a "archain 1a" speci... 434 6.7e-75 2
UNIPROTKB|P49661 - symbol:LOC_Os01g61710 "Coatomer subuni... 377 1.1e-64 2
TAIR|locus:2175269 - symbol:AT5G05010 species:3702 "Arabi... 361 1.1e-60 2
WB|WBGene00015734 - symbol:C13B9.3 species:6239 "Caenorha... 380 1.8e-60 2
DICTYBASE|DDB_G0268702 - symbol:copD "coatomer protein co... 291 2.6e-53 2
UNIPROTKB|G4MP14 - symbol:MGG_05676 "Coatomer subunit del... 258 3.7e-46 2
CGD|CAL0000185 - symbol:RET2 species:5476 "Candida albica... 241 1.2e-32 2
UNIPROTKB|Q5AGE3 - symbol:RET2 "Putative uncharacterized ... 241 1.2e-32 2
ASPGD|ASPL0000062974 - symbol:AN0922 species:162425 "Emer... 252 1.7e-26 2
SGD|S000001947 - symbol:RET2 "Delta subunit of the coatom... 185 1.5e-25 2
GENEDB_PFALCIPARUM|PF11_0359 - symbol:PF11_0359 "coatomer... 177 1.2e-21 2
UNIPROTKB|Q8II16 - symbol:PF11_0359 "Coatomer delta subun... 177 1.2e-21 2
POMBASE|SPCC285.08 - symbol:ret2 "coatomer delta subunit ... 229 4.6e-19 1
UNIPROTKB|E9PK34 - symbol:ARCN1 "Coatomer subunit delta" ... 184 7.0e-14 1
>FB|FBgn0028969 [details] [associations]
symbol:deltaCOP "delta-coatomer protein" species:7227
"Drosophila melanogaster" [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS] [GO:0030126 "COPI vesicle
coat" evidence=ISS;NAS] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006911 "phagocytosis, engulfment" evidence=IMP]
[GO:0010883 "regulation of lipid storage" evidence=IDA] [GO:0009306
"protein secretion" evidence=IMP] [GO:0007436 "larval salivary
gland morphogenesis" evidence=IMP] [GO:0035158 "regulation of tube
diameter, open tracheal system" evidence=IMP] InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072
GO:GO:0006886 GO:GO:0006911 EMBL:AE014298 GO:GO:0009306
GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447
SUPFAM:SSF64356 GO:GO:0010883 GO:GO:0035158 GO:GO:0007436
PANTHER:PTHR10121 GeneTree:ENSGT00390000017207 OMA:NNDVGVL
UniGene:Dm.6542 GeneID:45250 KEGG:dme:Dmel_CG14813 CTD:45250
FlyBase:FBgn0028969 GenomeRNAi:45250 NextBio:837953 EMBL:AY051528
RefSeq:NP_652012.1 SMR:Q9W555 IntAct:Q9W555 MINT:MINT-1564210
STRING:Q9W555 EnsemblMetazoa:FBtr0070371 UCSC:CG14813-RA
InParanoid:Q9W555 Uniprot:Q9W555
Length = 532
Score = 519 (187.8 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
Identities = 94/154 (61%), Positives = 112/154 (72%)
Query: 129 THPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSG 188
THPNVDKELFKS+T IGLKN KPFPLN D+GVLKWRF S DES +PL+INCWPSDNG G
Sbjct: 349 THPNVDKELFKSRTTIGLKNLGKPFPLNTDVGVLKWRFVSQDESAVPLTINCWPSDNGEG 408
Query: 189 GCDVNIXXXXXXXXXXLNQVTISIPLPLHCTPNVTECDGDYNYDARKNTLTWSLALIDSS 248
GCDVNI L V I IPLP++ P+V E DG YNYD+RK+ L W + +ID++
Sbjct: 409 GCDVNIEYELEAQQLELQDVAIVIPLPMNVQPSVAEYDGTYNYDSRKHVLQWHIPIIDAA 468
Query: 249 NKSGALEFSAPSASQSDFFPLQVSFSCNQSYANI 282
NKSG++EFS ++ DFFPLQVSF YA +
Sbjct: 469 NKSGSMEFSCSASIPGDFFPLQVSFVSKTPYAGV 502
Score = 347 (127.2 bits), Expect = 1.3e-84, Sum P(2) = 1.3e-84
Identities = 73/102 (71%), Positives = 87/102 (85%)
Query: 43 ATKIKLKNIKIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEK 102
A + KN K+ I+SRQFVEMT+ARIEGLLAAFPKLM++GKQHT+VETDSVRYVYQP+EK
Sbjct: 5 AAAVCTKNGKV-ILSRQFVEMTKARIEGLLAAFPKLMTAGKQHTYVETDSVRYVYQPMEK 63
Query: 103 LYMLLITTKTSNILEDLETLRLFSRV----THPNVDKELFKS 140
LYMLLITTK SNILEDLETLRLFS+V +H +KE+ ++
Sbjct: 64 LYMLLITTKASNILEDLETLRLFSKVIPEYSHSLDEKEIVEN 105
Score = 187 (70.9 bits), Expect = 4.1e-49, Sum P(2) = 4.1e-49
Identities = 33/67 (49%), Positives = 47/67 (70%)
Query: 292 LHCTPNVTECDGDYNYDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSC 351
++ P+V E DG YNYD+RK+ L W + +ID++NKSG++EFS ++ DFFPLQVSF
Sbjct: 436 MNVQPSVAEYDGTYNYDSRKHVLQWHIPIIDAANKSGSMEFSCSASIPGDFFPLQVSFVS 495
Query: 352 NQSYANI 358
YA +
Sbjct: 496 KTPYAGV 502
Score = 147 (56.8 bits), Expect = 1.6e-63, Sum P(2) = 1.6e-63
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 9 MDENEVTDNAFSLIFAFDEIVALGYRESVNLAQEATKIKLKNIKIAIVSRQFVEMTRAR 67
+DE E+ +NAF+LIFAFDEIVALGYRESVNLAQ T +++ + + + Q V T+ R
Sbjct: 97 LDEKEIVENAFNLIFAFDEIVALGYRESVNLAQIKTFVEMDSHEEKVY--QAVRQTQER 153
>MGI|MGI:2387591 [details] [associations]
symbol:Arcn1 "archain 1" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0021691 "cerebellar
Purkinje cell layer maturation" evidence=IMP] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0030137 "COPI-coated vesicle"
evidence=IDA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0043473 "pigmentation" evidence=IMP] [GO:0048193 "Golgi vesicle
transport" evidence=IMP] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 MGI:MGI:2387591
GO:GO:0006886 GO:GO:0016192 EMBL:CH466522 GO:GO:0030131
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
GO:GO:0030663 eggNOG:NOG309668 HOGENOM:HOG000203984
PANTHER:PTHR10121 CTD:372 GeneTree:ENSGT00390000017207
HOVERGEN:HBG005381 OMA:NNDVGVL OrthoDB:EOG4FBHSQ EMBL:AK028556
EMBL:BC017124 EMBL:BC023728 EMBL:BC033387 EMBL:BC034754
EMBL:BC083152 IPI:IPI00313558 RefSeq:NP_666097.3 UniGene:Mm.371682
UniGene:Mm.465799 ProteinModelPortal:Q5XJY5 STRING:Q5XJY5
PhosphoSite:Q5XJY5 REPRODUCTION-2DPAGE:Q5XJY5 PaxDb:Q5XJY5
PRIDE:Q5XJY5 Ensembl:ENSMUST00000034607 GeneID:213827
KEGG:mmu:213827 InParanoid:Q91W48 NextBio:374120 Bgee:Q5XJY5
CleanEx:MM_ARCN1 Genevestigator:Q5XJY5
GermOnline:ENSMUSG00000032096 Uniprot:Q5XJY5
Length = 511
Score = 462 (167.7 bits), Expect = 4.6e-78, Sum P(2) = 4.6e-78
Identities = 86/157 (54%), Positives = 115/157 (73%)
Query: 129 THPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSG 188
THPNVDK+LF +++ IGLKNP K FP+N+D+GVLKWR +T+ES +PL+INCWPS++G+G
Sbjct: 329 THPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG 388
Query: 189 GCDVNIXXXXXXXXXXLNQVTISIPLPLHC-TPNVTECDGDYNYDARKNTLTWSLALIDS 247
CDVNI LN V I+IPLP P + E DG+Y +D+R+NTL W L +ID+
Sbjct: 389 -CDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDA 447
Query: 248 SNKSGALEFSAPSASQSDFFPLQVSFSCNQSYANIKI 284
NKSG+LEFS P +DFFP+QVSF ++Y NI++
Sbjct: 448 KNKSGSLEFSIPG-QPNDFFPVQVSFISKKNYCNIQV 483
Score = 342 (125.4 bits), Expect = 4.6e-78, Sum P(2) = 4.6e-78
Identities = 68/75 (90%), Positives = 73/75 (97%)
Query: 54 AIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLLITTKTS 113
AIVSRQFVEMTR RIEGLLAAFPKLM++GKQHTFVET+SVRYVYQP+EKLYM+LITTK S
Sbjct: 15 AIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNS 74
Query: 114 NILEDLETLRLFSRV 128
NILEDLETLRLFSRV
Sbjct: 75 NILEDLETLRLFSRV 89
Score = 185 (70.2 bits), Expect = 1.3e-48, Sum P(2) = 1.3e-48
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 296 PNVTECDGDYNYDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQSY 355
P + E DG+Y +D+R+NTL W L +ID+ NKSG+LEFS P +DFFP+QVSF ++Y
Sbjct: 420 PVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIPG-QPNDFFPVQVSFISKKNY 478
Query: 356 ANIK 359
NI+
Sbjct: 479 CNIQ 482
Score = 132 (51.5 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
Identities = 25/36 (69%), Positives = 32/36 (88%)
Query: 9 MDENEVTDNAFSLIFAFDEIVALGYRESVNLAQEAT 44
++ENE++++ F LIFAFDEIVALGYRE+VNLAQ T
Sbjct: 97 LEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRT 132
>RGD|1359110 [details] [associations]
symbol:Arcn1 "archain 1" species:10116 "Rattus norvegicus"
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005794
"Golgi apparatus" evidence=ISO] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=IEA] [GO:0008344 "adult locomotory
behavior" evidence=ISO] [GO:0021691 "cerebellar Purkinje cell layer
maturation" evidence=ISO] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0030137 "COPI-coated vesicle" evidence=ISO] [GO:0043473
"pigmentation" evidence=ISO] [GO:0048193 "Golgi vesicle transport"
evidence=ISO] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 RGD:1359110
GO:GO:0006886 GO:GO:0016192 GO:GO:0030131 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356 GO:GO:0030663
eggNOG:NOG309668 HOGENOM:HOG000203984 PANTHER:PTHR10121 CTD:372
GeneTree:ENSGT00390000017207 HOVERGEN:HBG005381 OrthoDB:EOG4FBHSQ
EMBL:BC081979 IPI:IPI00373289 RefSeq:NP_001007663.1 UniGene:Rn.2185
ProteinModelPortal:Q66H80 STRING:Q66H80 PhosphoSite:Q66H80
PRIDE:Q66H80 Ensembl:ENSRNOT00000018598 GeneID:300674
KEGG:rno:300674 UCSC:RGD:1359110 InParanoid:Q66H80 NextBio:647284
Genevestigator:Q66H80 GermOnline:ENSRNOG00000013843 Uniprot:Q66H80
Length = 511
Score = 462 (167.7 bits), Expect = 4.6e-78, Sum P(2) = 4.6e-78
Identities = 86/157 (54%), Positives = 115/157 (73%)
Query: 129 THPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSG 188
THPNVDK+LF +++ IGLKNP K FP+N+D+GVLKWR +T+ES +PL+INCWPS++G+G
Sbjct: 329 THPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG 388
Query: 189 GCDVNIXXXXXXXXXXLNQVTISIPLPLHC-TPNVTECDGDYNYDARKNTLTWSLALIDS 247
CDVNI LN V I+IPLP P + E DG+Y +D+R+NTL W L +ID+
Sbjct: 389 -CDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDA 447
Query: 248 SNKSGALEFSAPSASQSDFFPLQVSFSCNQSYANIKI 284
NKSG+LEFS P +DFFP+QVSF ++Y NI++
Sbjct: 448 KNKSGSLEFSIPG-QPNDFFPVQVSFISKKNYCNIQV 483
Score = 342 (125.4 bits), Expect = 4.6e-78, Sum P(2) = 4.6e-78
Identities = 68/75 (90%), Positives = 73/75 (97%)
Query: 54 AIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLLITTKTS 113
AIVSRQFVEMTR RIEGLLAAFPKLM++GKQHTFVET+SVRYVYQP+EKLYM+LITTK S
Sbjct: 15 AIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNS 74
Query: 114 NILEDLETLRLFSRV 128
NILEDLETLRLFSRV
Sbjct: 75 NILEDLETLRLFSRV 89
Score = 185 (70.2 bits), Expect = 1.3e-48, Sum P(2) = 1.3e-48
Identities = 34/64 (53%), Positives = 47/64 (73%)
Query: 296 PNVTECDGDYNYDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQSY 355
P + E DG+Y +D+R+NTL W L +ID+ NKSG+LEFS P +DFFP+QVSF ++Y
Sbjct: 420 PVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSIPG-QPNDFFPVQVSFISKKNY 478
Query: 356 ANIK 359
NI+
Sbjct: 479 CNIQ 482
Score = 132 (51.5 bits), Expect = 6.1e-56, Sum P(2) = 6.1e-56
Identities = 25/36 (69%), Positives = 32/36 (88%)
Query: 9 MDENEVTDNAFSLIFAFDEIVALGYRESVNLAQEAT 44
++ENE++++ F LIFAFDEIVALGYRE+VNLAQ T
Sbjct: 97 LEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRT 132
>UNIPROTKB|P53619 [details] [associations]
symbol:ARCN1 "Coatomer subunit delta" species:9913 "Bos
taurus" [GO:0005515 "protein binding" evidence=IPI] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=TAS]
[GO:0006891 "intra-Golgi vesicle-mediated transport" evidence=TAS]
[GO:0030126 "COPI vesicle coat" evidence=IDA] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886
GO:GO:0006891 GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 GO:GO:0030126 GO:GO:0006890
eggNOG:NOG309668 HOGENOM:HOG000203984 PANTHER:PTHR10121 EMBL:X94265
IPI:IPI00706192 RefSeq:NP_001181942.1 UniGene:Bt.23103
ProteinModelPortal:P53619 IntAct:P53619 STRING:P53619 PRIDE:P53619
Ensembl:ENSBTAT00000008799 GeneID:533078 KEGG:bta:533078 CTD:372
GeneTree:ENSGT00390000017207 HOVERGEN:HBG005381 InParanoid:P53619
OMA:NNDVGVL OrthoDB:EOG4FBHSQ NextBio:20875903 Uniprot:P53619
Length = 511
Score = 456 (165.6 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 85/157 (54%), Positives = 115/157 (73%)
Query: 129 THPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSG 188
THPNVDK+LF +++ IGLKNP K FP+N+D+GVLKWR +T+ES +PL+INCWPS++G+G
Sbjct: 329 THPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG 388
Query: 189 GCDVNIXXXXXXXXXXLNQVTISIPLPLHC-TPNVTECDGDYNYDARKNTLTWSLALIDS 247
CDVNI LN V I+IPLP P + E DG+Y +D+R+NTL W L +ID+
Sbjct: 389 -CDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDA 447
Query: 248 SNKSGALEFSAPSASQSDFFPLQVSFSCNQSYANIKI 284
NKSG+LEFS + +DFFP+QVSF ++Y NI++
Sbjct: 448 KNKSGSLEFSI-AGQPNDFFPVQVSFISKKNYCNIQV 483
Score = 342 (125.4 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 68/75 (90%), Positives = 73/75 (97%)
Query: 54 AIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLLITTKTS 113
AIVSRQFVEMTR RIEGLLAAFPKLM++GKQHTFVET+SVRYVYQP+EKLYM+LITTK S
Sbjct: 15 AIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNS 74
Query: 114 NILEDLETLRLFSRV 128
NILEDLETLRLFSRV
Sbjct: 75 NILEDLETLRLFSRV 89
Score = 179 (68.1 bits), Expect = 5.8e-48, Sum P(2) = 5.8e-48
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 296 PNVTECDGDYNYDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQSY 355
P + E DG+Y +D+R+NTL W L +ID+ NKSG+LEFS + +DFFP+QVSF ++Y
Sbjct: 420 PVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSI-AGQPNDFFPVQVSFISKKNY 478
Query: 356 ANIK 359
NI+
Sbjct: 479 CNIQ 482
Score = 132 (51.5 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 25/36 (69%), Positives = 32/36 (88%)
Query: 9 MDENEVTDNAFSLIFAFDEIVALGYRESVNLAQEAT 44
++ENE++++ F LIFAFDEIVALGYRE+VNLAQ T
Sbjct: 97 LEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRT 132
>UNIPROTKB|B0YIW6 [details] [associations]
symbol:ARCN1 "Archain 1, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886 EMBL:CH471065
GO:GO:0016192 GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 HOGENOM:HOG000203984
PANTHER:PTHR10121 HOVERGEN:HBG005381 OMA:NNDVGVL OrthoDB:EOG4FBHSQ
EMBL:AP000941 UniGene:Hs.33642 HGNC:HGNC:649 ChiTaRS:ARCN1
EMBL:EF444951 IPI:IPI00298520 STRING:B0YIW6 Ensembl:ENST00000359415
UCSC:uc009zag.3 Uniprot:B0YIW6
Length = 552
Score = 456 (165.6 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 85/157 (54%), Positives = 115/157 (73%)
Query: 129 THPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSG 188
THPNVDK+LF +++ IGLKNP K FP+N+D+GVLKWR +T+ES +PL+INCWPS++G+G
Sbjct: 370 THPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG 429
Query: 189 GCDVNIXXXXXXXXXXLNQVTISIPLPLHC-TPNVTECDGDYNYDARKNTLTWSLALIDS 247
CDVNI LN V I+IPLP P + E DG+Y +D+R+NTL W L +ID+
Sbjct: 430 -CDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDA 488
Query: 248 SNKSGALEFSAPSASQSDFFPLQVSFSCNQSYANIKI 284
NKSG+LEFS + +DFFP+QVSF ++Y NI++
Sbjct: 489 KNKSGSLEFSI-AGQPNDFFPVQVSFVSKKNYCNIQV 524
Score = 342 (125.4 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 68/75 (90%), Positives = 73/75 (97%)
Query: 54 AIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLLITTKTS 113
AIVSRQFVEMTR RIEGLLAAFPKLM++GKQHTFVET+SVRYVYQP+EKLYM+LITTK S
Sbjct: 56 AIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNS 115
Query: 114 NILEDLETLRLFSRV 128
NILEDLETLRLFSRV
Sbjct: 116 NILEDLETLRLFSRV 130
Score = 179 (68.1 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 296 PNVTECDGDYNYDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQSY 355
P + E DG+Y +D+R+NTL W L +ID+ NKSG+LEFS + +DFFP+QVSF ++Y
Sbjct: 461 PVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSI-AGQPNDFFPVQVSFVSKKNY 519
Query: 356 ANIK 359
NI+
Sbjct: 520 CNIQ 523
Score = 132 (51.5 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 25/36 (69%), Positives = 32/36 (88%)
Query: 9 MDENEVTDNAFSLIFAFDEIVALGYRESVNLAQEAT 44
++ENE++++ F LIFAFDEIVALGYRE+VNLAQ T
Sbjct: 138 LEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRT 173
>UNIPROTKB|P48444 [details] [associations]
symbol:ARCN1 "Coatomer subunit delta" species:9606 "Homo
sapiens" [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=ISS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0048205 "COPI coating of Golgi
vesicle" evidence=TAS] Reactome:REACT_11123 InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072
GO:GO:0005829 GO:GO:0006886 GO:GO:0030131 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356 GO:GO:0030126
GO:GO:0048205 GO:GO:0006890 eggNOG:NOG309668 HOGENOM:HOG000203984
PANTHER:PTHR10121 CTD:372 HOVERGEN:HBG005381 EMBL:X81197
EMBL:X81198 EMBL:AK304019 EMBL:AP000941 EMBL:BC093636 EMBL:BC093638
IPI:IPI00514053 IPI:IPI00915422 PIR:A56750 RefSeq:NP_001135753.1
RefSeq:NP_001646.2 UniGene:Hs.33642 ProteinModelPortal:P48444
IntAct:P48444 STRING:P48444 PhosphoSite:P48444 DMDM:1351970
OGP:P48444 PaxDb:P48444 PRIDE:P48444 Ensembl:ENST00000264028
Ensembl:ENST00000392859 GeneID:372 KEGG:hsa:372 UCSC:uc001ptq.3
GeneCards:GC11P118444 HGNC:HGNC:649 HPA:HPA037573 MIM:600820
neXtProt:NX_P48444 PharmGKB:PA24931 ChiTaRS:ARCN1 GenomeRNAi:372
NextBio:1553 ArrayExpress:P48444 Bgee:P48444 CleanEx:HS_ARCN1
Genevestigator:P48444 GermOnline:ENSG00000095139 Uniprot:P48444
Length = 511
Score = 456 (165.6 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 85/157 (54%), Positives = 115/157 (73%)
Query: 129 THPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSG 188
THPNVDK+LF +++ IGLKNP K FP+N+D+GVLKWR +T+ES +PL+INCWPS++G+G
Sbjct: 329 THPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG 388
Query: 189 GCDVNIXXXXXXXXXXLNQVTISIPLPLHC-TPNVTECDGDYNYDARKNTLTWSLALIDS 247
CDVNI LN V I+IPLP P + E DG+Y +D+R+NTL W L +ID+
Sbjct: 389 -CDVNIEYELQEDNLELNDVVITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDA 447
Query: 248 SNKSGALEFSAPSASQSDFFPLQVSFSCNQSYANIKI 284
NKSG+LEFS + +DFFP+QVSF ++Y NI++
Sbjct: 448 KNKSGSLEFSI-AGQPNDFFPVQVSFVSKKNYCNIQV 483
Score = 342 (125.4 bits), Expect = 2.0e-77, Sum P(2) = 2.0e-77
Identities = 68/75 (90%), Positives = 73/75 (97%)
Query: 54 AIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLLITTKTS 113
AIVSRQFVEMTR RIEGLLAAFPKLM++GKQHTFVET+SVRYVYQP+EKLYM+LITTK S
Sbjct: 15 AIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNS 74
Query: 114 NILEDLETLRLFSRV 128
NILEDLETLRLFSRV
Sbjct: 75 NILEDLETLRLFSRV 89
Score = 179 (68.1 bits), Expect = 5.8e-48, Sum P(2) = 5.8e-48
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 296 PNVTECDGDYNYDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQSY 355
P + E DG+Y +D+R+NTL W L +ID+ NKSG+LEFS + +DFFP+QVSF ++Y
Sbjct: 420 PVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSI-AGQPNDFFPVQVSFVSKKNY 478
Query: 356 ANIK 359
NI+
Sbjct: 479 CNIQ 482
Score = 132 (51.5 bits), Expect = 2.6e-55, Sum P(2) = 2.6e-55
Identities = 25/36 (69%), Positives = 32/36 (88%)
Query: 9 MDENEVTDNAFSLIFAFDEIVALGYRESVNLAQEAT 44
++ENE++++ F LIFAFDEIVALGYRE+VNLAQ T
Sbjct: 97 LEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRT 132
>UNIPROTKB|F1PRT4 [details] [associations]
symbol:ARCN1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886
GO:GO:0016192 GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 PANTHER:PTHR10121 CTD:372
GeneTree:ENSGT00390000017207 OMA:NNDVGVL EMBL:AAEX03003446
RefSeq:XP_536552.2 Ensembl:ENSCAFT00000020001 GeneID:479415
KEGG:cfa:479415 Uniprot:F1PRT4
Length = 511
Score = 455 (165.2 bits), Expect = 2.5e-77, Sum P(2) = 2.5e-77
Identities = 85/157 (54%), Positives = 115/157 (73%)
Query: 129 THPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSG 188
THPNVDK+LF +++ IGLKNP K FP+N+D+GVLKWR +T+ES +PL+INCWPS++G+G
Sbjct: 329 THPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG 388
Query: 189 GCDVNIXXXXXXXXXXLNQVTISIPLPLHC-TPNVTECDGDYNYDARKNTLTWSLALIDS 247
CDVNI LN V I+IPLP P + E DG+Y +D+R+NTL W L +ID+
Sbjct: 389 -CDVNIEYELQEDNLELNDVIITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDA 447
Query: 248 SNKSGALEFSAPSASQSDFFPLQVSFSCNQSYANIKI 284
NKSG+LEFS + +DFFP+QVSF ++Y NI++
Sbjct: 448 KNKSGSLEFSI-AGQPNDFFPVQVSFISKRNYCNIQV 483
Score = 342 (125.4 bits), Expect = 2.5e-77, Sum P(2) = 2.5e-77
Identities = 68/75 (90%), Positives = 73/75 (97%)
Query: 54 AIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLLITTKTS 113
AIVSRQFVEMTR RIEGLLAAFPKLM++GKQHTFVET+SVRYVYQP+EKLYM+LITTK S
Sbjct: 15 AIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNS 74
Query: 114 NILEDLETLRLFSRV 128
NILEDLETLRLFSRV
Sbjct: 75 NILEDLETLRLFSRV 89
Score = 179 (68.1 bits), Expect = 5.8e-48, Sum P(2) = 5.8e-48
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 296 PNVTECDGDYNYDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQSY 355
P + E DG+Y +D+R+NTL W L +ID+ NKSG+LEFS + +DFFP+QVSF ++Y
Sbjct: 420 PVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSI-AGQPNDFFPVQVSFISKRNY 478
Query: 356 ANIK 359
NI+
Sbjct: 479 CNIQ 482
Score = 132 (51.5 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 25/36 (69%), Positives = 32/36 (88%)
Query: 9 MDENEVTDNAFSLIFAFDEIVALGYRESVNLAQEAT 44
++ENE++++ F LIFAFDEIVALGYRE+VNLAQ T
Sbjct: 97 LEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRT 132
>UNIPROTKB|I3LBY0 [details] [associations]
symbol:ARCN1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192
GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447
SUPFAM:SSF64356 PANTHER:PTHR10121 CTD:372
GeneTree:ENSGT00390000017207 OMA:NNDVGVL EMBL:FP565446
RefSeq:XP_003357366.1 Ensembl:ENSSSCT00000028599 GeneID:100622860
KEGG:ssc:100622860 Uniprot:I3LBY0
Length = 511
Score = 455 (165.2 bits), Expect = 2.5e-77, Sum P(2) = 2.5e-77
Identities = 85/157 (54%), Positives = 115/157 (73%)
Query: 129 THPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSG 188
THPNVDK+LF +++ IGLKNP K FP+N+D+GVLKWR +T+ES +PL+INCWPS++G+G
Sbjct: 329 THPNVDKKLFTAESLIGLKNPEKSFPVNSDVGVLKWRLQTTEESFIPLTINCWPSESGNG 388
Query: 189 GCDVNIXXXXXXXXXXLNQVTISIPLPLHC-TPNVTECDGDYNYDARKNTLTWSLALIDS 247
CDVNI LN V I+IPLP P + E DG+Y +D+R+NTL W L +ID+
Sbjct: 389 -CDVNIEYELQEDNLELNDVIITIPLPSGVGAPVIGEIDGEYRHDSRRNTLEWCLPVIDA 447
Query: 248 SNKSGALEFSAPSASQSDFFPLQVSFSCNQSYANIKI 284
NKSG+LEFS + +DFFP+QVSF ++Y NI++
Sbjct: 448 KNKSGSLEFSI-AGQPNDFFPVQVSFVSKKNYCNIQV 483
Score = 342 (125.4 bits), Expect = 2.5e-77, Sum P(2) = 2.5e-77
Identities = 68/75 (90%), Positives = 73/75 (97%)
Query: 54 AIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLLITTKTS 113
AIVSRQFVEMTR RIEGLLAAFPKLM++GKQHTFVET+SVRYVYQP+EKLYM+LITTK S
Sbjct: 15 AIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNS 74
Query: 114 NILEDLETLRLFSRV 128
NILEDLETLRLFSRV
Sbjct: 75 NILEDLETLRLFSRV 89
Score = 179 (68.1 bits), Expect = 5.8e-48, Sum P(2) = 5.8e-48
Identities = 33/64 (51%), Positives = 47/64 (73%)
Query: 296 PNVTECDGDYNYDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQSY 355
P + E DG+Y +D+R+NTL W L +ID+ NKSG+LEFS + +DFFP+QVSF ++Y
Sbjct: 420 PVIGEIDGEYRHDSRRNTLEWCLPVIDAKNKSGSLEFSI-AGQPNDFFPVQVSFVSKKNY 478
Query: 356 ANIK 359
NI+
Sbjct: 479 CNIQ 482
Score = 132 (51.5 bits), Expect = 3.3e-55, Sum P(2) = 3.3e-55
Identities = 25/36 (69%), Positives = 32/36 (88%)
Query: 9 MDENEVTDNAFSLIFAFDEIVALGYRESVNLAQEAT 44
++ENE++++ F LIFAFDEIVALGYRE+VNLAQ T
Sbjct: 97 LEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRT 132
>ZFIN|ZDB-GENE-040121-7 [details] [associations]
symbol:arcn1b "archain 1b" species:7955 "Danio rerio"
[GO:0030131 "clathrin adaptor complex" evidence=IEA] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072
ZFIN:ZDB-GENE-040121-7 GO:GO:0006886 GO:GO:0016192 GO:GO:0030131
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
eggNOG:NOG309668 HOGENOM:HOG000203984 PANTHER:PTHR10121
GeneTree:ENSGT00390000017207 HOVERGEN:HBG005381 OMA:NNDVGVL
OrthoDB:EOG4FBHSQ EMBL:CR385077 EMBL:BC050499 EMBL:BC075749
IPI:IPI00506794 RefSeq:NP_973722.1 UniGene:Dr.75156 STRING:Q7ZU89
Ensembl:ENSDART00000047902 GeneID:399661 KEGG:dre:399661 CTD:399661
InParanoid:Q7ZU89 NextBio:20816615 Uniprot:Q7ZU89
Length = 512
Score = 448 (162.8 bits), Expect = 4.1e-77, Sum P(2) = 4.1e-77
Identities = 86/158 (54%), Positives = 112/158 (70%)
Query: 129 THPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSG 188
THP+VDK+LF +++ IGLKN K FPLN+D+GVLKWR STDES +PL+INCWPS++GSG
Sbjct: 328 THPHVDKKLFTNESLIGLKNQEKSFPLNSDLGVLKWRLQSTDESLIPLTINCWPSESGSG 387
Query: 189 -GCDVNIXXXXXXXXXXLNQVTISIPLPLHC-TPNVTECDGDYNYDARKNTLTWSLALID 246
GCDVNI LN V I+IP+P P V + DG YN+D+RKN L WSL +ID
Sbjct: 388 SGCDVNIEYELQDEGLELNDVVITIPVPSGVGAPVVGDLDGQYNHDSRKNILEWSLPVID 447
Query: 247 SSNKSGALEFSAPSASQSDFFPLQVSFSCNQSYANIKI 284
NKSG+LEFS +DFFP+ VSF +++ +I++
Sbjct: 448 EKNKSGSLEFSI-DGKPNDFFPINVSFVSKRNFCDIQV 484
Score = 347 (127.2 bits), Expect = 4.1e-77, Sum P(2) = 4.1e-77
Identities = 69/75 (92%), Positives = 73/75 (97%)
Query: 54 AIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLLITTKTS 113
AIVSRQFVEMTR R+EGLLAAFPKLM++GKQHTFVETDSVRYVYQPLEKLYM+LITTK S
Sbjct: 15 AIVSRQFVEMTRTRVEGLLAAFPKLMNTGKQHTFVETDSVRYVYQPLEKLYMVLITTKNS 74
Query: 114 NILEDLETLRLFSRV 128
NILEDLETLRLFSRV
Sbjct: 75 NILEDLETLRLFSRV 89
Score = 168 (64.2 bits), Expect = 1.9e-47, Sum P(2) = 1.9e-47
Identities = 32/64 (50%), Positives = 44/64 (68%)
Query: 296 PNVTECDGDYNYDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQSY 355
P V + DG YN+D+RKN L WSL +ID NKSG+LEFS +DFFP+ VSF +++
Sbjct: 421 PVVGDLDGQYNHDSRKNILEWSLPVIDEKNKSGSLEFSI-DGKPNDFFPINVSFVSKRNF 479
Query: 356 ANIK 359
+I+
Sbjct: 480 CDIQ 483
Score = 127 (49.8 bits), Expect = 6.1e-54, Sum P(2) = 6.1e-54
Identities = 24/36 (66%), Positives = 32/36 (88%)
Query: 9 MDENEVTDNAFSLIFAFDEIVALGYRESVNLAQEAT 44
++E+E++++ F LIFAFDEIVALGYRE+VNLAQ T
Sbjct: 97 LEESEISEHCFDLIFAFDEIVALGYRENVNLAQIRT 132
>UNIPROTKB|Q5ZL57 [details] [associations]
symbol:ARCN1 "Coatomer subunit delta" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0030131 "clathrin adaptor complex" evidence=IEA]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192
GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447
SUPFAM:SSF64356 GO:GO:0030663 eggNOG:NOG309668 HOGENOM:HOG000203984
PANTHER:PTHR10121 CTD:372 GeneTree:ENSGT00390000017207
HOVERGEN:HBG005381 OMA:NNDVGVL OrthoDB:EOG4FBHSQ EMBL:AJ719877
IPI:IPI00600471 RefSeq:NP_001072967.1 UniGene:Gga.1878
ProteinModelPortal:Q5ZL57 IntAct:Q5ZL57 STRING:Q5ZL57 PRIDE:Q5ZL57
Ensembl:ENSGALT00000012021 GeneID:770561 KEGG:gga:770561
InParanoid:Q5ZL57 NextBio:20920779 Uniprot:Q5ZL57
Length = 510
Score = 449 (163.1 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 83/157 (52%), Positives = 113/157 (71%)
Query: 129 THPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSG 188
THPNVDK+LF ++++IGLKNP K FP+N+D+GVLKWR +T+ES +PL+INCWPS++G+
Sbjct: 328 THPNVDKKLFTAESQIGLKNPEKSFPINSDVGVLKWRLQTTEESFIPLTINCWPSESGNS 387
Query: 189 GCDVNIXXXXXXXXXXLNQVTISIPLPLHC-TPNVTECDGDYNYDARKNTLTWSLALIDS 247
CDVNI LN V I IPLP P + E DG+Y +D+R+N L W L +ID+
Sbjct: 388 -CDVNIEYELQEESLELNDVVIMIPLPSGVGAPVIGEIDGEYRHDSRRNLLEWCLPVIDA 446
Query: 248 SNKSGALEFSAPSASQSDFFPLQVSFSCNQSYANIKI 284
NKSG+LEFS + +DFFP+QVSF ++Y NI++
Sbjct: 447 KNKSGSLEFSI-AGQPNDFFPVQVSFISKKNYCNIQV 482
Score = 342 (125.4 bits), Expect = 1.1e-76, Sum P(2) = 1.1e-76
Identities = 68/75 (90%), Positives = 73/75 (97%)
Query: 54 AIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLLITTKTS 113
AIVSRQFVEMTR RIEGLLAAFPKLM++GKQHTFVET+SVRYVYQP+EKLYM+LITTK S
Sbjct: 15 AIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESVRYVYQPMEKLYMVLITTKNS 74
Query: 114 NILEDLETLRLFSRV 128
NILEDLETLRLFSRV
Sbjct: 75 NILEDLETLRLFSRV 89
Score = 173 (66.0 bits), Expect = 2.4e-47, Sum P(2) = 2.4e-47
Identities = 32/64 (50%), Positives = 46/64 (71%)
Query: 296 PNVTECDGDYNYDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQSY 355
P + E DG+Y +D+R+N L W L +ID+ NKSG+LEFS + +DFFP+QVSF ++Y
Sbjct: 419 PVIGEIDGEYRHDSRRNLLEWCLPVIDAKNKSGSLEFSI-AGQPNDFFPVQVSFISKKNY 477
Query: 356 ANIK 359
NI+
Sbjct: 478 CNIQ 481
Score = 132 (51.5 bits), Expect = 1.4e-54, Sum P(2) = 1.4e-54
Identities = 25/36 (69%), Positives = 32/36 (88%)
Query: 9 MDENEVTDNAFSLIFAFDEIVALGYRESVNLAQEAT 44
++ENE++++ F LIFAFDEIVALGYRE+VNLAQ T
Sbjct: 97 LEENEISEHCFDLIFAFDEIVALGYRENVNLAQIRT 132
>ZFIN|ZDB-GENE-021031-2 [details] [associations]
symbol:arcn1a "archain 1a" species:7955 "Danio rerio"
[GO:0030126 "COPI vesicle coat" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0006890 "retrograde
vesicle-mediated transport, Golgi to ER" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072
ZFIN:ZDB-GENE-021031-2 GO:GO:0006886 GO:GO:0016192 GO:GO:0030131
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
eggNOG:NOG309668 HOGENOM:HOG000203984 PANTHER:PTHR10121 OMA:SMESHEE
GeneTree:ENSGT00390000017207 HOVERGEN:HBG005381 OrthoDB:EOG4FBHSQ
EMBL:BX294169 EMBL:BC045318 IPI:IPI00509974 RefSeq:NP_958867.1
UniGene:Dr.77264 STRING:Q7ZW27 Ensembl:ENSDART00000014666
GeneID:266982 KEGG:dre:266982 CTD:266982 InParanoid:Q7ZW27
NextBio:20804844 Uniprot:Q7ZW27
Length = 509
Score = 434 (157.8 bits), Expect = 6.7e-75, Sum P(2) = 6.7e-75
Identities = 83/157 (52%), Positives = 108/157 (68%)
Query: 129 THPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSG 188
THPNVDK+LF + IGLKNP K FPL +D+GVLKWR +TDES +PL+INCWPS++G+G
Sbjct: 327 THPNVDKKLFTLDSVIGLKNPDKSFPLKSDVGVLKWRLQTTDESLIPLTINCWPSESGTG 386
Query: 189 GCDVNIXXXXXXXXXXLNQVTISIPLPLHC-TPNVTECDGDYNYDARKNTLTWSLALIDS 247
CDVNI LN V ISIP+P P + + DG+Y +D+R+N L W L +ID
Sbjct: 387 -CDVNIEYELQDDSLELNDVVISIPVPSGVGAPVIGDLDGEYRHDSRRNVLEWCLPVIDL 445
Query: 248 SNKSGALEFSAPSASQSDFFPLQVSFSCNQSYANIKI 284
NK+G+LEFS S +DFFP+ VSF SY +I++
Sbjct: 446 KNKTGSLEFSI-SGQPNDFFPVNVSFVSKGSYCDIQV 481
Score = 340 (124.7 bits), Expect = 6.7e-75, Sum P(2) = 6.7e-75
Identities = 66/75 (88%), Positives = 73/75 (97%)
Query: 54 AIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLLITTKTS 113
A+VSRQFVEMTR R+EGLLAAFPKLM++GKQHTFVET+SVRYVYQPLEKLYM+L+TTK S
Sbjct: 15 ALVSRQFVEMTRTRVEGLLAAFPKLMNTGKQHTFVETESVRYVYQPLEKLYMVLVTTKNS 74
Query: 114 NILEDLETLRLFSRV 128
NILEDLETLRLFSRV
Sbjct: 75 NILEDLETLRLFSRV 89
Score = 158 (60.7 bits), Expect = 1.6e-45, Sum P(2) = 1.6e-45
Identities = 30/64 (46%), Positives = 43/64 (67%)
Query: 296 PNVTECDGDYNYDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQSY 355
P + + DG+Y +D+R+N L W L +ID NK+G+LEFS S +DFFP+ VSF SY
Sbjct: 418 PVIGDLDGEYRHDSRRNVLEWCLPVIDLKNKTGSLEFSI-SGQPNDFFPVNVSFVSKGSY 476
Query: 356 ANIK 359
+I+
Sbjct: 477 CDIQ 480
Score = 127 (49.8 bits), Expect = 1.8e-52, Sum P(2) = 1.8e-52
Identities = 24/36 (66%), Positives = 32/36 (88%)
Query: 9 MDENEVTDNAFSLIFAFDEIVALGYRESVNLAQEAT 44
++E+E++++ F LIFAFDEIVALGYRE+VNLAQ T
Sbjct: 97 LEESEISEHCFDLIFAFDEIVALGYRENVNLAQIRT 132
Score = 37 (18.1 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 12/48 (25%), Positives = 19/48 (39%)
Query: 277 QSYANIKIFIEKLFLLHCTPNVTECDGDYNYDARKNTLTWSLALIDSS 324
Q++ N+ +KLF L + D + + L W L D S
Sbjct: 326 QTHPNVD---KKLFTLDSVIGLKNPDKSFPLKSDVGVLKWRLQTTDES 370
>UNIPROTKB|P49661 [details] [associations]
symbol:LOC_Os01g61710 "Coatomer subunit delta-3"
species:39947 "Oryza sativa Japonica Group" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005798 "Golgi-associated vesicle" evidence=ISS]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192
GO:GO:0005798 GO:GO:0030131 SUPFAM:SSF49447 SUPFAM:SSF64356
EMBL:AP008207 GO:GO:0030663 EMBL:Z67962 EMBL:AP004366 EMBL:AK069745
EMBL:D22365 PIR:T03598 RefSeq:NP_001044715.1 UniGene:Os.5854
ProteinModelPortal:P49661 IntAct:P49661
EnsemblPlants:LOC_Os01g61710.2 EnsemblPlants:LOC_Os01g61710.3
EnsemblPlants:LOC_Os01g61710.4 GeneID:4327409 KEGG:osa:4327409
Gramene:P49661 eggNOG:NOG309668 HOGENOM:HOG000203984
ProtClustDB:CLSN2689474 PANTHER:PTHR10121 Uniprot:P49661
Length = 518
Score = 377 (137.8 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 71/158 (44%), Positives = 106/158 (67%)
Query: 129 THPNVDKELFKSKTEIGLKNPSKPFPLN-NDIGVLKWRFTSTDESCLPLSINCWPSDNGS 187
THPN++KELF S+ +G K+P++PFP N+ ++KWR +ES LPL++NCWPS +G+
Sbjct: 335 THPNINKELFNSQQIVGAKDPNRPFPSGQNETPLVKWRIQELNESSLPLAVNCWPSVSGN 394
Query: 188 GGCDVNIXXXXXXXXXXLNQVTISIPLP-LHCTPNVTECDGDYNYDARKNTLTWSLALID 246
VNI L+ V ISIPLP L P V + DG++ YD+R + L WS+ L+D
Sbjct: 395 ETY-VNIEYEASEMFD-LHNVVISIPLPALREAPGVRQIDGEWRYDSRNSVLEWSIILVD 452
Query: 247 SSNKSGALEFSAPSASQSDFFPLQVSFSCNQSYANIKI 284
SN+SG+LEF+ P+A S FFP+ V FS + +++++K+
Sbjct: 453 QSNRSGSLEFTVPAADPSTFFPISVGFSASNTFSDLKV 490
Score = 300 (110.7 bits), Expect = 1.1e-64, Sum P(2) = 1.1e-64
Identities = 63/97 (64%), Positives = 80/97 (82%)
Query: 43 ATKIKLKNIKIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEK 102
A I K+ K A+VSRQFV+M+R RI+GLLAAFPKL+ SGKQHT+VET++VRYVYQP+E
Sbjct: 5 AASIISKSGK-ALVSRQFVDMSRIRIDGLLAAFPKLVGSGKQHTYVETENVRYVYQPIEA 63
Query: 103 LYMLLITTKTSNILEDLETLRLFSRVTH---PNVDKE 136
LY+LLIT K SNILEDL+TLRL S++ P++D+E
Sbjct: 64 LYLLLITNKQSNILEDLDTLRLLSKLIPEYAPSLDEE 100
Score = 191 (72.3 bits), Expect = 4.5e-44, Sum P(2) = 4.5e-44
Identities = 43/127 (33%), Positives = 73/127 (57%)
Query: 249 NKSGALEFSAPSASQSDFFPLQV----SFSCNQSYANIKIFIEKLFLLHCT--------- 295
N++ +++ ++S PL V S S N++Y NI+ ++F LH
Sbjct: 364 NETPLVKWRIQELNESSL-PLAVNCWPSVSGNETYVNIEYEASEMFDLHNVVISIPLPAL 422
Query: 296 ---PNVTECDGDYNYDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSCN 352
P V + DG++ YD+R + L WS+ L+D SN+SG+LEF+ P+A S FFP+ V FS +
Sbjct: 423 REAPGVRQIDGEWRYDSRNSVLEWSIILVDQSNRSGSLEFTVPAADPSTFFPISVGFSAS 482
Query: 353 QSYANIK 359
+++++K
Sbjct: 483 NTFSDLK 489
Score = 78 (32.5 bits), Expect = 2.5e-41, Sum P(2) = 2.5e-41
Identities = 16/33 (48%), Positives = 23/33 (69%)
Query: 9 MDENEVTDNAFSLIFAFDEIVALGYRESVNLAQ 41
+DE V AF L+FAF E ++LG +E+V +AQ
Sbjct: 97 LDEEGVCKAAFELLFAFIEAISLGNKENVTVAQ 129
>TAIR|locus:2175269 [details] [associations]
symbol:AT5G05010 species:3702 "Arabidopsis thaliana"
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0016020 "membrane" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 GO:GO:0005829 GO:GO:0009506
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006886 GO:GO:0016020
GO:GO:0016192 EMBL:AB005245 GO:GO:0030131 SUPFAM:SSF49447
SUPFAM:SSF64356 GO:GO:0030663 eggNOG:NOG309668 HOGENOM:HOG000203984
ProtClustDB:CLSN2689474 PANTHER:PTHR10121 EMBL:AY054464
EMBL:AY054658 EMBL:AY114626 EMBL:AK221894 IPI:IPI00518859
RefSeq:NP_001031836.1 RefSeq:NP_568147.1 UniGene:At.20926
ProteinModelPortal:Q93Y22 STRING:Q93Y22 PaxDb:Q93Y22 PRIDE:Q93Y22
EnsemblPlants:AT5G05010.1 EnsemblPlants:AT5G05010.2 GeneID:830383
KEGG:ath:AT5G05010 TAIR:At5g05010 InParanoid:Q93Y22 OMA:SMESHEE
PhylomeDB:Q93Y22 Genevestigator:Q93Y22 Uniprot:Q93Y22
Length = 527
Score = 361 (132.1 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 66/160 (41%), Positives = 102/160 (63%)
Query: 129 THPNVDKELFKSKTEIGLKNPSKPFPLN---NDIGVLKWRFTSTDESCLPLSINCWPSDN 185
THPN+++++F ++ +GLK P +PFP + +G+L+WR DES +PL+INCWPS +
Sbjct: 340 THPNINRDMFNNENILGLKRPDQPFPTGQGGDGVGLLRWRMQRADESMVPLTINCWPSVS 399
Query: 186 GSGGCDVNIXXXXXXXXXXLNQVTISIPLP-LHCTPNVTECDGDYNYDARKNTLTWSLAL 244
G+ V++ N V IS+PLP L P+V +CDG++ YD R + L WS+ L
Sbjct: 400 GNETY-VSLEYEASSMFDLTN-VIISVPLPALREAPSVRQCDGEWRYDPRNSVLEWSILL 457
Query: 245 IDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQSYANIKI 284
ID+SN+SG++EF P S FFP+ V F+ +Y+ +K+
Sbjct: 458 IDNSNRSGSMEFVVPPVDSSVFFPISVQFAATSTYSGLKV 497
Score = 279 (103.3 bits), Expect = 1.1e-60, Sum P(2) = 1.1e-60
Identities = 55/86 (63%), Positives = 72/86 (83%)
Query: 43 ATKIKLKNIKIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEK 102
A I +K+ K+ IVSR +V+M+R RIEGLLAAFPKL+ GKQHT++ET++VRYVYQP+E
Sbjct: 5 AAAIVVKSGKV-IVSRHYVDMSRIRIEGLLAAFPKLVGMGKQHTYIETENVRYVYQPIEA 63
Query: 103 LYMLLITTKTSNILEDLETLRLFSRV 128
L++LL+TTK SNILEDL TL L S++
Sbjct: 64 LFLLLVTTKQSNILEDLATLTLLSKL 89
Score = 188 (71.2 bits), Expect = 2.6e-41, Sum P(2) = 2.6e-41
Identities = 42/123 (34%), Positives = 65/123 (52%)
Query: 238 LTWSLALIDSSNKSGALEFSAPSASQSD-FFPLQVSFSCNQSYANIKIFIEKLFLLHCTP 296
L W + D S + PS S ++ + L+ S N+ I + L L P
Sbjct: 376 LRWRMQRADESMVPLTIN-CWPSVSGNETYVSLEYEASSMFDLTNVIISVP-LPALREAP 433
Query: 297 NVTECDGDYNYDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQSYA 356
+V +CDG++ YD R + L WS+ LID+SN+SG++EF P S FFP+ V F+ +Y+
Sbjct: 434 SVRQCDGEWRYDPRNSVLEWSILLIDNSNRSGSMEFVVPPVDSSVFFPISVQFAATSTYS 493
Query: 357 NIK 359
+K
Sbjct: 494 GLK 496
Score = 97 (39.2 bits), Expect = 1.5e-41, Sum P(2) = 1.5e-41
Identities = 17/33 (51%), Positives = 27/33 (81%)
Query: 9 MDENEVTDNAFSLIFAFDEIVALGYRESVNLAQ 41
+DE ++ +F LIFAFDE+++LG++ESV +AQ
Sbjct: 97 LDEEGISRASFELIFAFDEVISLGHKESVTVAQ 129
>WB|WBGene00015734 [details] [associations]
symbol:C13B9.3 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0030131
"clathrin adaptor complex" evidence=IEA] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0006915 "apoptotic
process" evidence=IMP] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 GO:GO:0006915
GO:GO:0006886 GO:GO:0002119 GO:GO:0016192 GO:GO:0018996
GO:GO:0000003 GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 GO:GO:0030663 eggNOG:NOG309668
HOGENOM:HOG000203984 PANTHER:PTHR10121 GeneTree:ENSGT00390000017207
OMA:NNDVGVL EMBL:FO080523 PIR:C88487 RefSeq:NP_498463.1
ProteinModelPortal:Q09236 DIP:DIP-26714N MINT:MINT-1070043
STRING:Q09236 PaxDb:Q09236 PRIDE:Q09236 EnsemblMetazoa:C13B9.3
GeneID:175940 KEGG:cel:CELE_C13B9.3 UCSC:C13B9.3 CTD:175940
WormBase:C13B9.3 InParanoid:Q09236 NextBio:890392 Uniprot:Q09236
Length = 515
Score = 380 (138.8 bits), Expect = 1.8e-60, Sum P(2) = 1.8e-60
Identities = 68/155 (43%), Positives = 96/155 (61%)
Query: 130 HPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSDNGSGG 189
HPN+DK+ ++S + + +K KP+P+N+D+G+LKW+ ++E LP+S NCWP ++ S G
Sbjct: 335 HPNLDKKEWQSSSTLKIKPNGKPYPVNSDVGILKWKMALSEEEQLPISFNCWPQES-SDG 393
Query: 190 CDVNIXXXXXXXXXXLNQVTISIPLPLHCTPNVTECDGDYNYDARKNTLTWSLALIDSSN 249
VNI LN V I +PLP P+V ECDG+Y Y KN + WSLA+IDSSN
Sbjct: 394 VQVNIEYTLQREDITLNNVRIIVPLPTATAPSVGECDGEYEYHKTKNVIVWSLAVIDSSN 453
Query: 250 KSGALEFSAPSASQSDFFPLQVSFSCNQSYANIKI 284
SG LEFS P+ FFP+ V F+ + I +
Sbjct: 454 SSGTLEFSVPNGHCDHFFPVSVGFTSENLFVPITV 488
Score = 257 (95.5 bits), Expect = 1.8e-60, Sum P(2) = 1.8e-60
Identities = 56/93 (60%), Positives = 71/93 (76%)
Query: 55 IVSRQFV-EMTRARIEGLLAAFPKLMSSGK-----QHTFVETDSVRYVYQPLEKLYMLLI 108
+V+RQFV +M R+R+EGL+ AFPKL+ + K QHTFVETDSVRYVY PL+ +Y++L+
Sbjct: 16 LVARQFVNDMMRSRLEGLVDAFPKLIGNEKEAATRQHTFVETDSVRYVYHPLDNIYLVLV 75
Query: 109 TTKTSNILEDLETLRLFSRVT----HPNVDKEL 137
TTK SNILEDLETLRLF RV N +KE+
Sbjct: 76 TTKNSNILEDLETLRLFVRVIPEYCRSNEEKEI 108
Score = 189 (71.6 bits), Expect = 5.3e-39, Sum P(2) = 5.3e-39
Identities = 45/134 (33%), Positives = 68/134 (50%)
Query: 229 YNYDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQ---SYANIKIF 285
Y ++ L W +AL S + + F+ SD + + ++ + + N++I
Sbjct: 358 YPVNSDVGILKWKMAL--SEEEQLPISFNCWPQESSDGVQVNIEYTLQREDITLNNVRII 415
Query: 286 IEKLFLLHCT-PNVTECDGDYNYDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFP 344
+ L T P+V ECDG+Y Y KN + WSLA+IDSSN SG LEFS P+ FFP
Sbjct: 416 VP---LPTATAPSVGECDGEYEYHKTKNVIVWSLAVIDSSNSSGTLEFSVPNGHCDHFFP 472
Query: 345 LQVSFSCNQSYANI 358
+ V F+ + I
Sbjct: 473 VSVGFTSENLFVPI 486
Score = 114 (45.2 bits), Expect = 2.0e-45, Sum P(2) = 2.0e-45
Identities = 23/35 (65%), Positives = 27/35 (77%)
Query: 10 DENEVTDNAFSLIFAFDEIVALGYRESVNLAQEAT 44
+E E+ + F LIFAFDE+V LGYRESVNLAQ T
Sbjct: 104 EEKEILAHDFDLIFAFDEVVTLGYRESVNLAQIRT 138
>DICTYBASE|DDB_G0268702 [details] [associations]
symbol:copD "coatomer protein complex delta subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030131 "clathrin adaptor complex"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0030663 "COPI-coated vesicle membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072
dictyBase:DDB_G0268702 GO:GO:0006886 GenomeReviews:CM000150_GR
GO:GO:0045335 GO:GO:0016192 EMBL:AAFI02000004 GO:GO:0030131
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
GO:GO:0030663 eggNOG:NOG309668 PANTHER:PTHR10121 OMA:SMESHEE
RefSeq:XP_646874.1 ProteinModelPortal:Q55EZ6 STRING:Q55EZ6
PRIDE:Q55EZ6 EnsemblProtists:DDB0305305 GeneID:8616557
KEGG:ddi:DDB_G0268702 ProtClustDB:CLSZ2846938 Uniprot:Q55EZ6
Length = 540
Score = 291 (107.5 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 60/105 (57%), Positives = 82/105 (78%)
Query: 43 ATKIKLKNIKIAIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEK 102
A I KN K A++SRQF EMT++R+EGLLAAFPKL+ G+QHTF+ET+++RYVYQPLE
Sbjct: 5 AAAICTKNGK-ALLSRQFSEMTKSRVEGLLAAFPKLIGLGRQHTFIETENIRYVYQPLES 63
Query: 103 LYMLLITTKTSNILEDLETLRLFSRVT--HPNVDK-ELFKSKTEI 144
LY++LIT K SNILEDLETL L +++ + N D+ ++ K+ E+
Sbjct: 64 LYIVLITNKNSNILEDLETLHLLAKLVPEYSNFDEYDISKNAFEL 108
Score = 290 (107.1 bits), Expect = 2.6e-53, Sum P(2) = 2.6e-53
Identities = 60/166 (36%), Positives = 92/166 (55%)
Query: 125 FSRVTHPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDESCLPLSINCWPSD 184
F +THPN+DK LF ++ + L++ K FP G+LKWR + ES +P+ +NCWPS
Sbjct: 359 FQFITHPNIDKALFGEQSVLRLRDGGKGFPSG---GILKWRCKTNQESMMPIRVNCWPSP 415
Query: 185 NGSGGCDVNIXXXXXXXXXXLNQVTISIPLPLHCTPNVTECDGDYNYDARKNTLTWSLAL 244
G VN+ L V I IP P P + + DG Y YD ++ + W + L
Sbjct: 416 -GRDSTTVNLEYDSLVGYE-LKSVFIVIPNPTSNAPIINQFDGLYEYDNKQKCVIWKIPL 473
Query: 245 IDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQSYANI---KIFIE 287
ID SN+ G++EFS +QS FFP+++ F+ +Q+ + +F+E
Sbjct: 474 IDDSNRQGSMEFSVKGNTQS-FFPVKIQFTASQTICDTTVGSVFVE 518
Score = 133 (51.9 bits), Expect = 8.3e-37, Sum P(2) = 8.3e-37
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 296 PNVTECDGDYNYDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQS 354
P + + DG Y YD ++ + W + LID SN+ G++EFS +QS FFP+++ F+ +Q+
Sbjct: 449 PIINQFDGLYEYDNKQKCVIWKIPLIDDSNRQGSMEFSVKGNTQS-FFPVKIQFTASQT 506
Score = 104 (41.7 bits), Expect = 1.2e-33, Sum P(2) = 1.2e-33
Identities = 18/32 (56%), Positives = 25/32 (78%)
Query: 10 DENEVTDNAFSLIFAFDEIVALGYRESVNLAQ 41
DE +++ NAF LIF FDE++A+GY+E V L Q
Sbjct: 97 DEYDISKNAFELIFTFDEVIAMGYKERVTLQQ 128
>UNIPROTKB|G4MP14 [details] [associations]
symbol:MGG_05676 "Coatomer subunit delta" species:242507
"Magnaporthe oryzae 70-15" [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886
GO:GO:0016192 EMBL:CM001231 GO:GO:0030131 InterPro:IPR022775
Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356 PANTHER:PTHR10121
RefSeq:XP_003710575.1 EnsemblFungi:MGG_05676T0 GeneID:2675981
KEGG:mgr:MGG_05676 Uniprot:G4MP14
Length = 514
Score = 258 (95.9 bits), Expect = 3.7e-46, Sum P(2) = 3.7e-46
Identities = 53/95 (55%), Positives = 75/95 (78%)
Query: 54 AIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLLITTKTS 113
A++SRQF EM R+RIE LLA+FPKL SG QHT VE D+VR+VYQPL++LYM+LIT + S
Sbjct: 15 AVLSRQFREMPRSRIEALLASFPKLADSGTQHTTVEQDNVRFVYQPLDELYMVLITNRQS 74
Query: 114 NILEDLETLRLFSRV---THPNVD-KELFKSKTEI 144
NIL+D+++L LF++V T ++D +E+ K+ E+
Sbjct: 75 NILQDIDSLHLFAQVVTSTCKSLDEREILKNAYEL 109
Score = 256 (95.2 bits), Expect = 3.7e-46, Sum P(2) = 3.7e-46
Identities = 55/173 (31%), Positives = 86/173 (49%)
Query: 129 THPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFT--STDESCLPLSINCWPSDNG 186
THPNVD+ LF S I + + FP+NN +GVL+W T + D S LP+S W +
Sbjct: 333 THPNVDRNLFNSSKVIQMSKADRGFPVNNSVGVLRWMATPKADDTSALPISFTVWVNKGS 392
Query: 187 SGGCDVNIXXXXXXXXXXLNQVTISIPLPLHCTPNVTECDGDYNYDARKNTLTWSLALID 246
G C + + L V++SIP P V+ D Y+ + L W++ ++
Sbjct: 393 DGNCTLTVEYELTGGDE-LRDVSVSIPYS-STEPTVSSFDA--TYEVSGDNLEWAIGTVN 448
Query: 247 SSNKSGALEFSAPSASQSDFFPLQVSFSCNQSYANIKIFIEKLFLLHCTPNVT 299
N +G+ EF A + +++FFP+QV FS + ++ I + LL VT
Sbjct: 449 EENANGSFEFEAMADDENEFFPMQVRFSKTTPFVDVDI--SSVTLLEMNEEVT 499
Score = 106 (42.4 bits), Expect = 3.4e-30, Sum P(2) = 3.4e-30
Identities = 23/63 (36%), Positives = 40/63 (63%)
Query: 9 MDENEVTDNAFSLIFAFDEIVALGYRESVNLAQEATKIKLKN----IKIAIVSRQFVEMT 64
+DE E+ NA+ L+ AFDE+V LGYRE++ ++Q T +++++ I+ I + +E T
Sbjct: 97 LDEREILKNAYELLSAFDELVTLGYRENLTISQIKTFLEMESHEERIQEIIARNKELEAT 156
Query: 65 RAR 67
R
Sbjct: 157 EER 159
Score = 103 (41.3 bits), Expect = 4.3e-30, Sum P(2) = 4.3e-30
Identities = 18/63 (28%), Positives = 35/63 (55%)
Query: 296 PNVTECDGDYNYDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQSY 355
P V+ D Y+ + L W++ ++ N +G+ EF A + +++FFP+QV FS +
Sbjct: 424 PTVSSFDA--TYEVSGDNLEWAIGTVNEENANGSFEFEAMADDENEFFPMQVRFSKTTPF 481
Query: 356 ANI 358
++
Sbjct: 482 VDV 484
>CGD|CAL0000185 [details] [associations]
symbol:RET2 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0030126 "COPI vesicle coat"
evidence=IEA] [GO:0051645 "Golgi localization" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0048313 "Golgi inheritance" evidence=IEA]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 CGD:CAL0000185 GO:GO:0006886
GO:GO:0016192 GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 EMBL:AACQ01000021 EMBL:AACQ01000022
eggNOG:NOG309668 PANTHER:PTHR10121 RefSeq:XP_720546.1
RefSeq:XP_720673.1 ProteinModelPortal:Q5AGE3 STRING:Q5AGE3
GeneID:3637630 GeneID:3637714 KEGG:cal:CaO19.11711
KEGG:cal:CaO19.4236 Uniprot:Q5AGE3
Length = 573
Score = 241 (89.9 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 54/96 (56%), Positives = 74/96 (77%)
Query: 54 AIVSRQFVEMTRARIEGLLAAFPKLMS-SGKQHTFVETDSVRYVYQPLEKLYMLLITTKT 112
A++SRQF +++R RI LLA FP L+S S QHT VE ++VRYVYQPLE+ Y++LIT KT
Sbjct: 15 ALLSRQFRDISRDRITALLANFPSLISNSSGQHTSVEDENVRYVYQPLEEFYIVLITNKT 74
Query: 113 SNILEDLETLRLF-SRVTH--PNVD-KELFKSKTEI 144
SNIL+D++TL LF S V++ N+D +E+F+S EI
Sbjct: 75 SNILQDIDTLHLFASTVSNLLRNIDEREIFESSFEI 110
Score = 173 (66.0 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 49/157 (31%), Positives = 74/157 (47%)
Query: 129 THPNVDKELFKSKTEIGLKNPSKPFPLNND-IGVLKWRFTST--DESCLPLSINCWPSDN 185
THPNVD+ LF+S++ I +K+ SK FP N+ +GVL+WR D S +P+ W S N
Sbjct: 370 THPNVDRNLFQSESHISVKDKSKTFPSNDQPLGVLRWRSVGKQDDTSLVPIVFTIWVSIN 429
Query: 186 GSGGCDVNIXXXXXXXXXXL-----NQVTISIPLPLHCTPNVTECDG-----DYN-YDAR 234
G V + N + I +P+ T NV DG Y YD +
Sbjct: 430 EEGQAQVTVEYELTNEFVETHPNHPNVENLKILVPV-LTDNVHLQDGGNDTVSYELYDGQ 488
Query: 235 KNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQV 271
+ +++ I + G+ EF+ P + FP+QV
Sbjct: 489 G--VVFNIGTIAIDDPQGSFEFTVPVVDEDSLFPMQV 523
Score = 98 (39.6 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 16/40 (40%), Positives = 31/40 (77%)
Query: 9 MDENEVTDNAFSLIFAFDEIVALGYRESVNLAQEATKIKL 48
+DE E+ +++F +I AFDE+++LGY+E++ L Q T +++
Sbjct: 98 IDEREIFESSFEIIDAFDEVISLGYKENLTLTQVQTFLEM 137
Score = 58 (25.5 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 21/73 (28%), Positives = 33/73 (45%)
Query: 281 NIKIFIEKLFLLHCTPNVTECDG-----DYN-YDARKNTLTWSLALIDSSNKSGALEFSA 334
N+KI + L T NV DG Y YD + + +++ I + G+ EF+
Sbjct: 458 NLKILVPVL-----TDNVHLQDGGNDTVSYELYDGQG--VVFNIGTIAIDDPQGSFEFTV 510
Query: 335 PSASQSDFFPLQV 347
P + FP+QV
Sbjct: 511 PVVDEDSLFPMQV 523
>UNIPROTKB|Q5AGE3 [details] [associations]
symbol:RET2 "Putative uncharacterized protein RET2"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072
CGD:CAL0000185 GO:GO:0006886 GO:GO:0016192 GO:GO:0030131
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447 SUPFAM:SSF64356
EMBL:AACQ01000021 EMBL:AACQ01000022 eggNOG:NOG309668
PANTHER:PTHR10121 RefSeq:XP_720546.1 RefSeq:XP_720673.1
ProteinModelPortal:Q5AGE3 STRING:Q5AGE3 GeneID:3637630
GeneID:3637714 KEGG:cal:CaO19.11711 KEGG:cal:CaO19.4236
Uniprot:Q5AGE3
Length = 573
Score = 241 (89.9 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 54/96 (56%), Positives = 74/96 (77%)
Query: 54 AIVSRQFVEMTRARIEGLLAAFPKLMS-SGKQHTFVETDSVRYVYQPLEKLYMLLITTKT 112
A++SRQF +++R RI LLA FP L+S S QHT VE ++VRYVYQPLE+ Y++LIT KT
Sbjct: 15 ALLSRQFRDISRDRITALLANFPSLISNSSGQHTSVEDENVRYVYQPLEEFYIVLITNKT 74
Query: 113 SNILEDLETLRLF-SRVTH--PNVD-KELFKSKTEI 144
SNIL+D++TL LF S V++ N+D +E+F+S EI
Sbjct: 75 SNILQDIDTLHLFASTVSNLLRNIDEREIFESSFEI 110
Score = 173 (66.0 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 49/157 (31%), Positives = 74/157 (47%)
Query: 129 THPNVDKELFKSKTEIGLKNPSKPFPLNND-IGVLKWRFTST--DESCLPLSINCWPSDN 185
THPNVD+ LF+S++ I +K+ SK FP N+ +GVL+WR D S +P+ W S N
Sbjct: 370 THPNVDRNLFQSESHISVKDKSKTFPSNDQPLGVLRWRSVGKQDDTSLVPIVFTIWVSIN 429
Query: 186 GSGGCDVNIXXXXXXXXXXL-----NQVTISIPLPLHCTPNVTECDG-----DYN-YDAR 234
G V + N + I +P+ T NV DG Y YD +
Sbjct: 430 EEGQAQVTVEYELTNEFVETHPNHPNVENLKILVPV-LTDNVHLQDGGNDTVSYELYDGQ 488
Query: 235 KNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQV 271
+ +++ I + G+ EF+ P + FP+QV
Sbjct: 489 G--VVFNIGTIAIDDPQGSFEFTVPVVDEDSLFPMQV 523
Score = 98 (39.6 bits), Expect = 5.0e-16, Sum P(2) = 5.0e-16
Identities = 16/40 (40%), Positives = 31/40 (77%)
Query: 9 MDENEVTDNAFSLIFAFDEIVALGYRESVNLAQEATKIKL 48
+DE E+ +++F +I AFDE+++LGY+E++ L Q T +++
Sbjct: 98 IDEREIFESSFEIIDAFDEVISLGYKENLTLTQVQTFLEM 137
Score = 58 (25.5 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 21/73 (28%), Positives = 33/73 (45%)
Query: 281 NIKIFIEKLFLLHCTPNVTECDG-----DYN-YDARKNTLTWSLALIDSSNKSGALEFSA 334
N+KI + L T NV DG Y YD + + +++ I + G+ EF+
Sbjct: 458 NLKILVPVL-----TDNVHLQDGGNDTVSYELYDGQG--VVFNIGTIAIDDPQGSFEFTV 510
Query: 335 PSASQSDFFPLQV 347
P + FP+QV
Sbjct: 511 PVVDEDSLFPMQV 523
>ASPGD|ASPL0000062974 [details] [associations]
symbol:AN0922 species:162425 "Emericella nidulans"
[GO:0003674 "molecular_function" evidence=ND] [GO:0030131 "clathrin
adaptor complex" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0051645 "Golgi localization"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=IEA] [GO:0048313 "Golgi inheritance"
evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR008968 InterPro:IPR011012 InterPro:IPR027059
Pfam:PF00928 PROSITE:PS51072 GO:GO:0006886 GO:GO:0016192
EMBL:BN001308 GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217
SUPFAM:SSF49447 SUPFAM:SSF64356 EMBL:AACD01000014 eggNOG:NOG309668
HOGENOM:HOG000203984 PANTHER:PTHR10121 OrthoDB:EOG41VPBJ
RefSeq:XP_658526.1 STRING:Q5BEV8 EnsemblFungi:CADANIAT00001733
GeneID:2876697 KEGG:ani:AN0922.2 OMA:KETINAE Uniprot:Q5BEV8
Length = 516
Score = 252 (93.8 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 54/112 (48%), Positives = 82/112 (73%)
Query: 54 AIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLLITTKTS 113
A++SRQF E+ R+R+E LLA+FPKL SG QHT VE D+VR+VYQPL++LY++LIT + S
Sbjct: 15 AVLSRQFREIARSRVEALLASFPKLADSGTQHTTVEQDNVRFVYQPLDELYIVLITNRQS 74
Query: 114 NILEDLETLRLFSRVTHPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWR 165
NIL+D+++L LF++VT ++ K L + EI L+N + +++ L +R
Sbjct: 75 NILQDIDSLHLFAQVT-TSICKSL--DEREI-LRNAFELLSAYDELVTLGYR 122
Score = 224 (83.9 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 51/159 (32%), Positives = 79/159 (49%)
Query: 129 THPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFT---STDESCLPLSINCWPSDN 185
THPNVDK F + + I LK+ SK FP NN IGVL+WR S + LP++ W +
Sbjct: 335 THPNVDKAAFSNSSIIQLKDTSKRFPANNSIGVLRWRVAGSGSDNADVLPITFTVW-LNK 393
Query: 186 GSGGCDVNIXXXXXXXXXXLNQVTISIPLPLHCTPNVTECDGDYNYDARKNTLTWSLALI 245
GS V + L V ++IP P V+ D Y ++L W++ +
Sbjct: 394 GSDSTTVTVEYELTGSDS-LRDVVVTIPYGT-AEPAVSSFDAVYEVSG--DSLDWNIGNV 449
Query: 246 DSSNKSGALEFSAPSASQSDFFPLQVSFSCNQSYANIKI 284
D +N S + EF + + +++FFP+ V FS + + +
Sbjct: 450 DENNASSSFEFESTADDENEFFPMTVRFSKASPFVEVDV 488
Score = 107 (42.7 bits), Expect = 1.8e-23, Sum P(2) = 1.8e-23
Identities = 19/42 (45%), Positives = 33/42 (78%)
Query: 9 MDENEVTDNAFSLIFAFDEIVALGYRESVNLAQEATKIKLKN 50
+DE E+ NAF L+ A+DE+V LGYRE+++L+Q T +++++
Sbjct: 97 LDEREILRNAFELLSAYDELVTLGYRENLSLSQIKTFLEMES 138
Score = 91 (37.1 bits), Expect = 1.7e-26, Sum P(2) = 1.7e-26
Identities = 15/47 (31%), Positives = 29/47 (61%)
Query: 304 DYNYDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFS 350
D Y+ ++L W++ +D +N S + EF + + +++FFP+ V FS
Sbjct: 432 DAVYEVSGDSLDWNIGNVDENNASSSFEFESTADDENEFFPMTVRFS 478
>SGD|S000001947 [details] [associations]
symbol:RET2 "Delta subunit of the coatomer complex (COPI)"
species:4932 "Saccharomyces cerevisiae" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030131 "clathrin adaptor complex" evidence=IEA]
[GO:0006890 "retrograde vesicle-mediated transport, Golgi to ER"
evidence=IEA;IMP] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=IMP] [GO:0030126 "COPI vesicle coat"
evidence=IEA;ISS;IMP] [GO:0048313 "Golgi inheritance" evidence=IGI]
[GO:0051645 "Golgi localization" evidence=IGI] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0030663
"COPI-coated vesicle membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 Pfam:PF00928 PROSITE:PS51072 SGD:S000001947
GO:GO:0006886 EMBL:D50617 EMBL:BK006940 GO:GO:0051645 GO:GO:0006888
GO:GO:0030131 InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF49447
SUPFAM:SSF64356 GO:GO:0030126 GO:GO:0006890 eggNOG:NOG309668
HOGENOM:HOG000203984 PANTHER:PTHR10121 OMA:SMESHEE
GeneTree:ENSGT00390000017207 OrthoDB:EOG41VPBJ PIR:S56306
RefSeq:NP_116709.3 RefSeq:NP_116711.3 ProteinModelPortal:P43621
SMR:P43621 DIP:DIP-5255N IntAct:P43621 MINT:MINT-548122
STRING:P43621 PaxDb:P43621 PeptideAtlas:P43621 EnsemblFungi:YFR051C
GeneID:850612 GeneID:850614 KEGG:sce:YFR051C KEGG:sce:YFR053C
KO:K00844 NextBio:966502 Genevestigator:P43621 GermOnline:YFR051C
GO:GO:0048313 Uniprot:P43621
Length = 546
Score = 185 (70.2 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 40/95 (42%), Positives = 62/95 (65%)
Query: 55 IVSRQFVEMTRARIEGLLAAFPKLMSS-GKQHTFVETDSVRYVYQPLEKLYMLLITTKTS 113
++SRQF ++++ R+ LL+ F L+S HTFVE VRYVY+P + Y++LIT + S
Sbjct: 16 LLSRQFKDLSKDRVLELLSNFQNLVSEISSDHTFVEDKHVRYVYRPFDNYYIILITNRQS 75
Query: 114 NILEDLETLRLFSRVTHPNV----DKELFKSKTEI 144
NI++DL TL LFS+ + + D+E+F + EI
Sbjct: 76 NIIKDLATLNLFSQTINSYLSSFQDQEIFHNAFEI 110
Score = 175 (66.7 bits), Expect = 1.5e-25, Sum P(2) = 1.5e-25
Identities = 52/159 (32%), Positives = 81/159 (50%)
Query: 125 FSRVTHPNVDKELFKSKTEIGLKNPSKPFPLNND-IGVLKWRFTST--DESCLPLSINCW 181
F THPN+DK+ F S I L++ SK FP N+ +GVL+WR + D+S +PL++ W
Sbjct: 345 FQFKTHPNIDKQSFLSTKLISLRDKSKAFPANDQSLGVLRWRKVAPAEDDSLIPLTLTTW 404
Query: 182 PSDNGSG-GCDVNIXXXXXXXXXXLNQVTISIPL----PLHCTPNVTEC-DGDY-NYDAR 234
S + S G DV I L V +IP+ P+ + C D + N D
Sbjct: 405 VSPSESQQGFDV-IIEYESVLETELADVIFTIPVFPQEPVDINTESSTCSDAEVVNMDQE 463
Query: 235 KNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSF 273
T + ++ I ++N +GAL F+ + + +P+ VSF
Sbjct: 464 MGT-SIKISKI-AANDAGALAFTIEAPYEDALYPMTVSF 500
Score = 83 (34.3 bits), Expect = 8.8e-15, Sum P(2) = 8.8e-15
Identities = 21/65 (32%), Positives = 39/65 (60%)
Query: 8 FMDENEVTDNAFSLIFAFDEIVALG-YRESVNLAQEATKIKLKN----IKIAIVSRQFVE 62
F D+ E+ NAF ++ +FDEIV++G Y+E+++ Q T + +++ I+ I + +E
Sbjct: 98 FQDQ-EIFHNAFEILSSFDEIVSMGGYKENLSFTQVQTYLSMESHEERIQEIIERNKEIE 156
Query: 63 MTRAR 67
T R
Sbjct: 157 ATEER 161
Score = 49 (22.3 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 9/27 (33%), Positives = 17/27 (62%)
Query: 323 SSNKSGALEFSAPSASQSDFFPLQVSF 349
++N +GAL F+ + + +P+ VSF
Sbjct: 474 AANDAGALAFTIEAPYEDALYPMTVSF 500
>GENEDB_PFALCIPARUM|PF11_0359 [details] [associations]
symbol:PF11_0359 "coatomer delta subunit,
putative" species:5833 "Plasmodium falciparum" [GO:0005737
"cytoplasm" evidence=ISS] [GO:0006890 "retrograde vesicle-mediated
transport, Golgi to ER" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR008968
InterPro:IPR011012 InterPro:IPR027059 PROSITE:PS51072 GO:GO:0005737
GO:GO:0006886 GO:GO:0030131 SUPFAM:SSF64356 GO:GO:0006890
EMBL:AE014186 PANTHER:PTHR10121 OMA:KETINAE RefSeq:XP_001348030.1
ProteinModelPortal:Q8II16 EnsemblProtists:PF11_0359:mRNA
GeneID:810906 KEGG:pfa:PF11_0359 EuPathDB:PlasmoDB:PF3D7_1134800
HOGENOM:HOG000282444 ProtClustDB:CLSZ2433355 Uniprot:Q8II16
Length = 487
Score = 177 (67.4 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 33/75 (44%), Positives = 52/75 (69%)
Query: 55 IVSRQFVEMTRARIEGLLAAFPKLMSSGKQ-HTFVETDSVRYVYQPLEKLYMLLITTKTS 113
+VSRQF +++ ++ L F L+ + HT++ETD VRYVYQPL+ +Y+ LIT S
Sbjct: 15 LVSRQFRNISKCDLDSLTIPFHNLIERERSDHTYIETDKVRYVYQPLDNIYIFLITNINS 74
Query: 114 NILEDLETLRLFSRV 128
NI+EDLE +++ S++
Sbjct: 75 NIIEDLEIIKVLSQI 89
Score = 145 (56.1 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 51/202 (25%), Positives = 86/202 (42%)
Query: 113 SNILEDLETLRLFSRVTHPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDES 172
S ++ +L+ HP +DK + S + LK+ SK F +N +LKW+ ++S
Sbjct: 291 SKVIVELDNEYSEKAKIHPILDKNKYNSNI-LELKDKSKNFRINTIYPLLKWKINHINDS 349
Query: 173 CLPLSINCWP-SDNGSGGCDVNIXXXXXXXXXXLNQVTISIPLPLHCTPNVTECD-GDYN 230
+PL+I+CWP DN S + I + + +++ P P + D G
Sbjct: 350 YIPLNISCWPCEDNESTLLSLEIENKRNNNDELIYDLNVNLMCPSAHKPQIISNDKGIIE 409
Query: 231 YDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQSYANIKIFIEKLF 290
+D L W + + +N+S +E S A+ FP V N + KL
Sbjct: 410 HDGV--LLAWKVDEL-KNNQSCQIEMSI-QANPESVFPFSVEAKSN-------MLAHKLN 458
Query: 291 LLHCTPNVTECDGDYNYDARKN 312
+L T+ D Y+ +KN
Sbjct: 459 VLKVYDEDTK--KDIEYEIKKN 478
Score = 72 (30.4 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 22/86 (25%), Positives = 45/86 (52%)
Query: 9 MDENEVTDNAFSLIFAFDEIVALGYRESVNLAQEATKIKLKNI--KIAIVSRQFVEMTRA 66
++E+ + F++IF DE++ G RE VN Q T I++++ K+ + R+ E
Sbjct: 98 INESTILKKCFTIIFYIDELIKNGVREIVNSNQIKTYIEMESHEEKLQTIIRENKEKEEK 157
Query: 67 RIEGLLAAFPKLMSSGKQHTFVETDS 92
+A+ KL + ++ + V ++S
Sbjct: 158 ERRKFIAS--KLEKNRQKQSKVSSNS 181
>UNIPROTKB|Q8II16 [details] [associations]
symbol:PF11_0359 "Coatomer delta subunit, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0006890 "retrograde vesicle-mediated transport,
Golgi to ER" evidence=ISS] InterPro:IPR008968 InterPro:IPR011012
InterPro:IPR027059 PROSITE:PS51072 GO:GO:0005737 GO:GO:0006886
GO:GO:0030131 SUPFAM:SSF64356 GO:GO:0006890 EMBL:AE014186
PANTHER:PTHR10121 OMA:KETINAE RefSeq:XP_001348030.1
ProteinModelPortal:Q8II16 EnsemblProtists:PF11_0359:mRNA
GeneID:810906 KEGG:pfa:PF11_0359 EuPathDB:PlasmoDB:PF3D7_1134800
HOGENOM:HOG000282444 ProtClustDB:CLSZ2433355 Uniprot:Q8II16
Length = 487
Score = 177 (67.4 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 33/75 (44%), Positives = 52/75 (69%)
Query: 55 IVSRQFVEMTRARIEGLLAAFPKLMSSGKQ-HTFVETDSVRYVYQPLEKLYMLLITTKTS 113
+VSRQF +++ ++ L F L+ + HT++ETD VRYVYQPL+ +Y+ LIT S
Sbjct: 15 LVSRQFRNISKCDLDSLTIPFHNLIERERSDHTYIETDKVRYVYQPLDNIYIFLITNINS 74
Query: 114 NILEDLETLRLFSRV 128
NI+EDLE +++ S++
Sbjct: 75 NIIEDLEIIKVLSQI 89
Score = 145 (56.1 bits), Expect = 1.2e-21, Sum P(2) = 1.2e-21
Identities = 51/202 (25%), Positives = 86/202 (42%)
Query: 113 SNILEDLETLRLFSRVTHPNVDKELFKSKTEIGLKNPSKPFPLNNDIGVLKWRFTSTDES 172
S ++ +L+ HP +DK + S + LK+ SK F +N +LKW+ ++S
Sbjct: 291 SKVIVELDNEYSEKAKIHPILDKNKYNSNI-LELKDKSKNFRINTIYPLLKWKINHINDS 349
Query: 173 CLPLSINCWP-SDNGSGGCDVNIXXXXXXXXXXLNQVTISIPLPLHCTPNVTECD-GDYN 230
+PL+I+CWP DN S + I + + +++ P P + D G
Sbjct: 350 YIPLNISCWPCEDNESTLLSLEIENKRNNNDELIYDLNVNLMCPSAHKPQIISNDKGIIE 409
Query: 231 YDARKNTLTWSLALIDSSNKSGALEFSAPSASQSDFFPLQVSFSCNQSYANIKIFIEKLF 290
+D L W + + +N+S +E S A+ FP V N + KL
Sbjct: 410 HDGV--LLAWKVDEL-KNNQSCQIEMSI-QANPESVFPFSVEAKSN-------MLAHKLN 458
Query: 291 LLHCTPNVTECDGDYNYDARKN 312
+L T+ D Y+ +KN
Sbjct: 459 VLKVYDEDTK--KDIEYEIKKN 478
Score = 72 (30.4 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 22/86 (25%), Positives = 45/86 (52%)
Query: 9 MDENEVTDNAFSLIFAFDEIVALGYRESVNLAQEATKIKLKNI--KIAIVSRQFVEMTRA 66
++E+ + F++IF DE++ G RE VN Q T I++++ K+ + R+ E
Sbjct: 98 INESTILKKCFTIIFYIDELIKNGVREIVNSNQIKTYIEMESHEEKLQTIIRENKEKEEK 157
Query: 67 RIEGLLAAFPKLMSSGKQHTFVETDS 92
+A+ KL + ++ + V ++S
Sbjct: 158 ERRKFIAS--KLEKNRQKQSKVSSNS 181
>POMBASE|SPCC285.08 [details] [associations]
symbol:ret2 "coatomer delta subunit Ret2 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006890
"retrograde vesicle-mediated transport, Golgi to ER" evidence=ISO]
[GO:0030126 "COPI vesicle coat" evidence=ISO] InterPro:IPR011012
InterPro:IPR027059 PomBase:SPCC285.08 GO:GO:0005829 GO:GO:0005634
GO:GO:0006886 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0006888
InterPro:IPR022775 Pfam:PF01217 SUPFAM:SSF64356 GO:GO:0030126
GO:GO:0006890 eggNOG:NOG309668 PANTHER:PTHR10121 PIR:T41254
RefSeq:NP_588336.1 ProteinModelPortal:O74496 STRING:O74496
EnsemblFungi:SPCC285.08.1 GeneID:2538953 KEGG:spo:SPCC285.08
OMA:YLEMESH OrthoDB:EOG41VPBJ NextBio:20800128 Uniprot:O74496
Length = 240
Score = 229 (85.7 bits), Expect = 4.6e-19, P = 4.6e-19
Identities = 44/75 (58%), Positives = 62/75 (82%)
Query: 54 AIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVRYVYQPLEKLYMLLITTKTS 113
AI+SRQF EM+R R+E LL++FP L+S Q+T VE+D+VR+VYQPL++LY++LIT S
Sbjct: 15 AIISRQFREMSRVRVESLLSSFPALVSEKSQNTTVESDNVRFVYQPLDELYIVLITNLQS 74
Query: 114 NILEDLETLRLFSRV 128
NIL+D++TL L S+V
Sbjct: 75 NILQDIDTLHLLSQV 89
>UNIPROTKB|E9PK34 [details] [associations]
symbol:ARCN1 "Coatomer subunit delta" species:9606 "Homo
sapiens" [GO:0006890 "retrograde vesicle-mediated transport, Golgi
to ER" evidence=IEA] [GO:0030126 "COPI vesicle coat" evidence=IEA]
InterPro:IPR027059 PANTHER:PTHR10121 EMBL:AP000941 HGNC:HGNC:649
ChiTaRS:ARCN1 IPI:IPI00984360 ProteinModelPortal:E9PK34
Ensembl:ENST00000534182 ArrayExpress:E9PK34 Bgee:E9PK34
Uniprot:E9PK34
Length = 83
Score = 184 (69.8 bits), Expect = 7.0e-14, P = 7.0e-14
Identities = 36/41 (87%), Positives = 40/41 (97%)
Query: 54 AIVSRQFVEMTRARIEGLLAAFPKLMSSGKQHTFVETDSVR 94
AIVSRQFVEMTR RIEGLLAAFPKLM++GKQHTFVET+S+R
Sbjct: 15 AIVSRQFVEMTRTRIEGLLAAFPKLMNTGKQHTFVETESIR 55
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.133 0.390 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 359 349 0.00099 116 3 11 22 0.40 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 605 (64 KB)
Total size of DFA: 224 KB (2121 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 26.82u 0.08s 26.90t Elapsed: 00:00:44
Total cpu time: 26.82u 0.08s 26.90t Elapsed: 00:00:53
Start: Thu Aug 15 14:07:37 2013 End: Thu Aug 15 14:08:30 2013