RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy16333
         (192 letters)



>d1d5ra1 b.7.1.1 (A:188-351) Pten tumor suppressor
           (Phoshphoinositide phosphatase), C-terminal domain
           {Human (Homo sapiens) [TaxId: 9606]}
          Length = 141

 Score = 62.3 bits (151), Expect = 2e-13
 Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 7/79 (8%)

Query: 67  PLYLTHVTVLGAPSFDRCGGGCHAFLKIYEGLVCVYTSGVHGVGSEARQFTVNVAGERQR 126
            L    +     P F   GG C+    + +  V +Y+S       E +            
Sbjct: 5   ALLFHKMMFETIPMFS--GGTCNPQFVVCQLKVKIYSSNSGPTRREDKFMYFEFPQ---- 58

Query: 127 RGLQLRGDILLKCYHRGNK 145
             L + GDI ++ +H+ NK
Sbjct: 59  -PLPVCGDIKVEFFHKQNK 76


>d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten
           (Pten tumor suppressor), N-terminal domain {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 174

 Score = 34.2 bits (78), Expect = 0.004
 Identities = 13/40 (32%), Positives = 20/40 (50%)

Query: 142 RGNKDRIGVVVSAYMHYSNICGTADQALDRFAMKRFLDDK 181
           +  K R GV++ AY+ +      A +ALD +   R  D K
Sbjct: 112 KAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVRTRDKK 151


>d1ykga1 c.23.5.2 (A:63-208) Sulfite reductase alpha-component CysJ
           N-terminal domain {Escherichia coli [TaxId: 562]}
          Length = 146

 Score = 24.7 bits (53), Expect = 6.2
 Identities = 7/41 (17%), Positives = 15/41 (36%)

Query: 148 IGVVVSAYMHYSNICGTADQALDRFAMKRFLDDKIGDLDFP 188
             +  ++Y  +       D  L     +R LD    D+++ 
Sbjct: 88  FSLGDTSYEFFCQSGKDFDSKLAELGGERLLDRVDADVEYQ 128


>d1yfua1 b.82.1.20 (A:1-174) 3-hydroxyanthranilate-3,4-dioxygenase
           {Ralstonia metallidurans [TaxId: 119219]}
          Length = 174

 Score = 24.7 bits (54), Expect = 7.1
 Identities = 12/45 (26%), Positives = 16/45 (35%), Gaps = 11/45 (24%)

Query: 115 QFTVN-VAGERQRRG----------LQLRGDILLKCYHRGNKDRI 148
            F V  V G   R             QLRG+  L  +  G ++R 
Sbjct: 35  DFIVTVVGGPNHRTDYHDDPLEEFFYQLRGNAYLNLWVDGRRERA 79


>d1nb5i_ d.17.1.2 (I:) Cystatin A (stefin A) {Human (Homo sapiens)
           [TaxId: 9606]}
          Length = 98

 Score = 23.9 bits (52), Expect = 7.9
 Identities = 4/16 (25%), Positives = 8/16 (50%)

Query: 85  GGGCHAFLKIYEGLVC 100
           G   +  LK+++ L  
Sbjct: 60  GDNKYMHLKVFKSLPG 75


>d1vk5a_ a.220.1.1 (A:) Hypothetical protein At3g22680 {Thale-cress
           (Arabidopsis thaliana) [TaxId: 3702]}
          Length = 121

 Score = 23.8 bits (51), Expect = 9.5
 Identities = 9/15 (60%), Positives = 9/15 (60%)

Query: 26  VSSPMNRPFIDNIFP 40
            S PM   FID IFP
Sbjct: 106 RSDPMYHSFIDPIFP 120


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.325    0.142    0.438 

Gapped
Lambda     K      H
   0.267   0.0633    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 745,581
Number of extensions: 33817
Number of successful extensions: 78
Number of sequences better than 10.0: 1
Number of HSP's gapped: 76
Number of HSP's successfully gapped: 7
Length of query: 192
Length of database: 2,407,596
Length adjustment: 80
Effective length of query: 112
Effective length of database: 1,309,196
Effective search space: 146629952
Effective search space used: 146629952
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 50 (23.2 bits)