BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16342
(143 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P48611|PTPS_DROME 6-pyruvoyl tetrahydrobiopterin synthase OS=Drosophila melanogaster
GN=pr PE=1 SV=1
Length = 168
Score = 195 bits (495), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 87/139 (62%), Positives = 112/139 (80%)
Query: 4 SKVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKE 63
S+ P+ +LTR E FSACHRLHSP L+D EN +GKCNNFHGHGHNYTVE+T++GPI +
Sbjct: 2 SQQPVAFLTRRETFSACHRLHSPQLSDAENLEVFGKCNNFHGHGHNYTVEITVRGPIDRR 61
Query: 64 RGMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPE 123
GMVLNI +LK + IM +DHKNLDKDV YFA+ ST+EN+A++IW+N++ +K+PE
Sbjct: 62 TGMVLNITELKEAIETVIMKRLDHKNLDKDVEYFANTPSTTENLAVYIWDNIRLQLKKPE 121
Query: 124 LLYEVKLYETDKNIVLYRG 142
LLYEVK++ET KNI+ YRG
Sbjct: 122 LLYEVKIHETPKNIISYRG 140
>sp|Q90W95|PTPS_POERE 6-pyruvoyl tetrahydrobiopterin synthase OS=Poecilia reticulata
GN=pts PE=2 SV=1
Length = 147
Score = 191 bits (485), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 88/136 (64%), Positives = 112/136 (82%), Gaps = 1/136 (0%)
Query: 8 IGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMV 67
IGY+TRV+ FSACHRLHS L+DEENK YGKCNN +GHGHNY VEVT++G I GMV
Sbjct: 13 IGYITRVQSFSACHRLHSLRLSDEENKEVYGKCNNPYGHGHNYKVEVTVRGKIDPVTGMV 72
Query: 68 LNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYE 127
+N+ DLK + + IM+P+DHKNLDKDVPYFADVVST+EN+A++IW+N+ K + L YE
Sbjct: 73 MNLTDLKKCIEEVIMIPLDHKNLDKDVPYFADVVSTTENLAVYIWDNMAKALPA-SLPYE 131
Query: 128 VKLYETDKNIVLYRGE 143
++++ETDKNIV+YRGE
Sbjct: 132 IRIHETDKNIVVYRGE 147
>sp|Q03393|PTPS_HUMAN 6-pyruvoyl tetrahydrobiopterin synthase OS=Homo sapiens GN=PTS PE=1
SV=1
Length = 145
Score = 169 bits (427), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 82/133 (61%), Positives = 105/133 (78%), Gaps = 1/133 (0%)
Query: 11 LTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNI 70
++R FSA HRL+S L+DEEN +GKCNN +GHGHNY V VT+ G I GMV+N+
Sbjct: 14 VSRRISFSASHRLYSKFLSDEENLKLFGKCNNPNGHGHNYKVVVTVHGEIDPATGMVMNL 73
Query: 71 NDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKL 130
DLK YM +AIM P+DHKNLD DVPYFADVVST+ENVA++IW+NL+K++ +LY+VK+
Sbjct: 74 ADLKKYMEEAIMQPLDHKNLDMDVPYFADVVSTTENVAVYIWDNLQKVLP-VGVLYKVKV 132
Query: 131 YETDKNIVLYRGE 143
YETD NIV+Y+GE
Sbjct: 133 YETDNNIVVYKGE 145
>sp|Q5REZ5|PTPS_PONAB 6-pyruvoyl tetrahydrobiopterin synthase OS=Pongo abelii GN=PTS PE=2
SV=1
Length = 145
Score = 168 bits (426), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 82/133 (61%), Positives = 105/133 (78%), Gaps = 1/133 (0%)
Query: 11 LTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNI 70
++R FSA HRL+S L+DEEN +GKC+N +GHGHNY V VT+ G I GMV+N+
Sbjct: 14 VSRRISFSASHRLYSKFLSDEENLKLFGKCSNPNGHGHNYKVVVTVHGEIDPATGMVMNL 73
Query: 71 NDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKL 130
DLK YM +AIM P+DHKNLD DVPYFADVVST+ENVA++IW+NL+K++ +LY+VKL
Sbjct: 74 ADLKKYMEEAIMQPLDHKNLDMDVPYFADVVSTTENVAVYIWDNLQKVLP-VGVLYKVKL 132
Query: 131 YETDKNIVLYRGE 143
YETD NIV+Y+GE
Sbjct: 133 YETDNNIVVYKGE 145
>sp|P27213|PTPS_RAT 6-pyruvoyl tetrahydrobiopterin synthase OS=Rattus norvegicus GN=Pts
PE=1 SV=1
Length = 144
Score = 167 bits (424), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 81/128 (63%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Query: 16 KFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKV 75
FSA HRLHSP L+ EEN +GKCNN +GHGHNY V VT+ G I GMV+N+ DLK
Sbjct: 18 SFSASHRLHSPSLSAEENLKVFGKCNNPNGHGHNYKVVVTIHGEIDPVTGMVMNLTDLKE 77
Query: 76 YMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDK 135
YM +AIM P+DHKNLD DVPYFADVVST+ENVA++IW NL++++ LY+VK+YETD
Sbjct: 78 YMEEAIMKPLDHKNLDLDVPYFADVVSTTENVAVYIWENLQRLLPVGA-LYKVKVYETDN 136
Query: 136 NIVLYRGE 143
NIV+Y+GE
Sbjct: 137 NIVVYKGE 144
>sp|Q9R1Z7|PTPS_MOUSE 6-pyruvoyl tetrahydrobiopterin synthase OS=Mus musculus GN=Pts PE=2
SV=2
Length = 144
Score = 166 bits (421), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 80/128 (62%), Positives = 100/128 (78%), Gaps = 1/128 (0%)
Query: 16 KFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKV 75
FSA HRLHSP L+DEEN +GKCNN +GHGHNY V VT+ G I GMV+N+ DLK
Sbjct: 18 SFSASHRLHSPSLSDEENLRVFGKCNNPNGHGHNYKVVVTVHGEIDPVTGMVMNLTDLKE 77
Query: 76 YMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDK 135
YM +AIM P+DHKNLD DVPYFAD VST+ENVA++IW +L+K++ LY+VK++ETD
Sbjct: 78 YMEEAIMKPLDHKNLDLDVPYFADAVSTTENVAVYIWESLQKLLPVGA-LYKVKVFETDN 136
Query: 136 NIVLYRGE 143
NIV+Y+GE
Sbjct: 137 NIVVYKGE 144
>sp|O02058|PTPS_CAEEL Putative 6-pyruvoyl tetrahydrobiopterin synthase OS=Caenorhabditis
elegans GN=ptps-1 PE=1 SV=2
Length = 140
Score = 144 bits (362), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/138 (50%), Positives = 95/138 (68%), Gaps = 1/138 (0%)
Query: 5 KVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKER 64
++PI + RV+ FSA HRLHS L+D ENK T+GKCNN +GHGHNY +V L+G +
Sbjct: 3 RMPIVTMERVDSFSAAHRLHSEKLSDAENKETFGKCNNSNGHGHNYVWKVKLRGEVDPTS 62
Query: 65 GMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPEL 124
GMV ++ LK M ++ +DH+NLDKDV +F VSTSENVAI+++ LK +M P +
Sbjct: 63 GMVYDLAKLKKEM-SLVLDTVDHRNLDKDVEFFKTTVSTSENVAIYMFEKLKSVMSNPSV 121
Query: 125 LYEVKLYETDKNIVLYRG 142
LY+V + ET KNI Y+G
Sbjct: 122 LYKVTIEETPKNIFTYKG 139
>sp|Q1ZXI0|PTPS_DICDI 6-pyruvoyl tetrahydrobiopterin synthase OS=Dictyostelium discoideum
GN=ptsA PE=3 SV=1
Length = 135
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/133 (50%), Positives = 94/133 (70%), Gaps = 4/133 (3%)
Query: 11 LTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNI 70
LTR E FS+ HRL+S L+ EENK YGKC N HGHNY +EV++KG + ++ GM +NI
Sbjct: 7 LTRREVFSSSHRLYSDKLSLEENKKIYGKCIN--SHGHNYVLEVSIKGAVKEDIGMFMNI 64
Query: 71 NDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKL 130
+LK + + +M +DHKNL+ DVP +V+T+EN++IFIW+ L +K + LYEVK+
Sbjct: 65 TELKEILKEKVMDKLDHKNLENDVPELKGIVTTTENLSIFIWDQLFPSLK--DFLYEVKI 122
Query: 131 YETDKNIVLYRGE 143
ET+ N V+YRGE
Sbjct: 123 LETENNFVVYRGE 135
>sp|P80081|PTPS_SALSA 6-pyruvoyl tetrahydrobiopterin synthase (Fragments) OS=Salmo salar
GN=pts PE=1 SV=2
Length = 103
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 76/136 (55%), Gaps = 46/136 (33%)
Query: 8 IGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMV 67
IGY+TRV+ F A HRLHSP L V
Sbjct: 14 IGYITRVQSFCASHRLHSPTL--------------------------------------V 35
Query: 68 LNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYE 127
+NI ++K ++ + I P+DHKNLDKDVPYFA+V NVA++I +N+ K + LLYE
Sbjct: 36 MNITNIKEHIEEVI--PLDHKNLDKDVPYFANV-----NVAVYIXDNMVKQLP-ANLLYE 87
Query: 128 VKLYETDKNIVLYRGE 143
VK++ETDKNIV+YRGE
Sbjct: 88 VKIHETDKNIVVYRGE 103
>sp|P65872|QUED_SHIFL 6-carboxy-5,6,7,8-tetrahydropterin synthase OS=Shigella flexneri
GN=queD PE=3 SV=1
Length = 121
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 17 FSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVY 76
F A HRL PH+ + KC HGH ++ V + + G + G +++ +LK
Sbjct: 12 FEAAHRL--PHVPEGH------KCGRLHGH--SFMVRLEITGEVDPHTGWIIDFAELKA- 60
Query: 77 MVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKN 136
+DH L+ D+P + TSE +A +IW+ +K ++ LL V + ET
Sbjct: 61 AFKPTYERLDHHYLN-DIPGLEN--PTSEVLAKWIWDQVKPVVP---LLSAVMVKETCTA 114
Query: 137 IVLYRGE 143
+YRGE
Sbjct: 115 GCIYRGE 121
>sp|P65870|QUED_ECOLI 6-carboxy-5,6,7,8-tetrahydropterin synthase OS=Escherichia coli
(strain K12) GN=queD PE=1 SV=1
Length = 121
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 17 FSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVY 76
F A HRL PH+ + KC HGH ++ V + + G + G +++ +LK
Sbjct: 12 FEAAHRL--PHVPEGH------KCGRLHGH--SFMVRLEITGEVDPHTGWIIDFAELKA- 60
Query: 77 MVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKN 136
+DH L+ D+P + TSE +A +IW+ +K ++ LL V + ET
Sbjct: 61 AFKPTYERLDHHYLN-DIPGLEN--PTSEVLAKWIWDQVKPVVP---LLSAVMVKETCTA 114
Query: 137 IVLYRGE 143
+YRGE
Sbjct: 115 GCIYRGE 121
>sp|P65871|QUED_ECO57 6-carboxy-5,6,7,8-tetrahydropterin synthase OS=Escherichia coli
O157:H7 GN=queD PE=3 SV=1
Length = 121
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 17 FSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVY 76
F A HRL PH+ + KC HGH ++ V + + G + G +++ +LK
Sbjct: 12 FEAAHRL--PHVPEGH------KCGRLHGH--SFMVRLEITGEVDPHTGWIIDFAELKA- 60
Query: 77 MVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYETDKN 136
+DH L+ D+P + TSE +A +IW+ +K ++ LL V + ET
Sbjct: 61 AFKPTYERLDHHYLN-DIPGLEN--PTSEVLAKWIWDQVKPVVP---LLSAVMVKETCTA 114
Query: 137 IVLYRGE 143
+YRGE
Sbjct: 115 GCIYRGE 121
>sp|P44123|QUED_HAEIN 6-carboxy-5,6,7,8-tetrahydropterin synthase OS=Haemophilus
influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
GN=queD PE=3 SV=1
Length = 141
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 32/128 (25%)
Query: 38 GKCNNFHGHGHNYTVEVTLKGPISK---ERGMVLNINDLKVYMVDAIMVPMDH------- 87
GKC N HGH Y ++V + G + K ++ MV++ +DLK + I+ PMDH
Sbjct: 21 GKCQNL--HGHTYKLQVEISGDLYKSGAKKAMVIDFSDLKSIVKKVILDPMDHAFIYDQT 78
Query: 88 -----------KNLDKD---VPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLYET 133
+ L+ VP+ +T+E +A FI+N LK E + ++L+ET
Sbjct: 79 NERESQIATLLQKLNSKTFGVPF----RTTAEEIARFIFNRLKH--DEQLSISSIRLWET 132
Query: 134 DKNIVLYR 141
+ Y+
Sbjct: 133 PTSFCEYQ 140
>sp|O29809|QUED_ARCFU Putative 6-carboxy-5,6,7,8-tetrahydropterin synthase
OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 /
DSM 4304 / JCM 9628 / NBRC 100126) GN=queD PE=3 SV=1
Length = 115
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 46/79 (58%), Gaps = 9/79 (11%)
Query: 37 YGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDHKNLDKDVPY 96
+ KC H GHN+ VEV + G + KE GMV++ DLK +V+ ++ DH L++ +
Sbjct: 22 HKKCGKVH--GHNFKVEVEISGKV-KENGMVMDFFDLK-RIVNEVVAKFDHTLLNEQIE- 76
Query: 97 FADVVSTSENVAIFIWNNL 115
+ TSEN+ + I++ L
Sbjct: 77 ----IPTSENICLRIFSEL 91
>sp|E7FHF1|DHNPA_PYRFU Dihydroneopterin monophosphate aldolase OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1278 PE=1 SV=1
Length = 114
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 54/92 (58%), Gaps = 12/92 (13%)
Query: 46 HGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDHKNLDK--DVPYFADVVST 103
HGH +++EV ++G I K G V++ LK +VD ++ +DH+NL+K D P T
Sbjct: 26 HGHTFSLEVVVEGEIKK--GYVMDFLKLK-KVVDGVVKELDHRNLNKIMDNP-------T 75
Query: 104 SENVAIFIWNNLKKIMKEPELLYEVKLYETDK 135
+EN+A++I ++K + L + L+E ++
Sbjct: 76 TENIALWISERIRKNLPGDVKLKRLSLWEGNE 107
>sp|O66626|QUED_AQUAE 6-carboxy-5,6,7,8-tetrahydropterin synthase OS=Aquifex aeolicus
(strain VF5) GN=queD PE=3 SV=1
Length = 162
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 72/166 (43%), Gaps = 41/166 (24%)
Query: 11 LTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHG----------HGHNYTVEVTLKGPI 60
+++ +F A HR+ +LT YG+ F HGH+Y +EVT+
Sbjct: 5 ISKTFRFEAGHRVWKQNLT-------YGRGAQFTKEKPVNKCVNLHGHSYVLEVTVGSDT 57
Query: 61 SKERGMVLNINDLKVYMVDAIMVPMDHKNL----DKDVPYFADVVS-------------- 102
E+ MV++ +K + ++ +DH + D P DV
Sbjct: 58 LSEQDMVMDFYHVK-NALKGLIEEIDHSFIIDVNDPMYPELKDVAEKYGAMKIFPVEFCP 116
Query: 103 TSENVAIFIWNNLKKIMKEPELLYEVK-----LYETDKNIVLYRGE 143
T+E +A F ++ LKK ++E LL EVK L+ET + Y+ E
Sbjct: 117 TAEALAKFFYDFLKKRLEEAGLLGEVKVVKVVLWETATSKAEYKEE 162
>sp|Q68XI9|QUED_RICTY 6-carboxy-5,6,7,8-tetrahydropterin synthase OS=Rickettsia typhi
(strain ATCC VR-144 / Wilmington) GN=queD PE=3 SV=1
Length = 138
Score = 37.0 bits (84), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 65/144 (45%), Gaps = 29/144 (20%)
Query: 12 TRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLN-- 69
TR F A HR+ +NK + HGH+Y +E+T+ + + GMV++
Sbjct: 5 TRRIDFDAGHRI-----IGHKNKCQFL-------HGHHYVLEITIAANKTDKLGMVIDFG 52
Query: 70 -INDLKVYMVDA-----IMVPMDHKNLDKDVP-------YFADVVSTSENVAIFIWNNL- 115
I +L +DA +++ D K + K + Y+ T+EN+AI + N +
Sbjct: 53 LIKNLAKKWIDANFDHNLILHQDDKEIGKQIENYTGQKIYYMRNNPTAENIAIHLKNEIF 112
Query: 116 -KKIMKEPELLYEVKLYETDKNIV 138
K + + + +KLYET V
Sbjct: 113 PKLFIDQNFFVTSLKLYETQNCFV 136
>sp|O31676|QUED_BACSU 6-carboxy-5,6,7,8-tetrahydropterin synthase OS=Bacillus subtilis
(strain 168) GN=queD PE=1 SV=2
Length = 146
Score = 36.2 bits (82), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 55/110 (50%), Gaps = 12/110 (10%)
Query: 38 GKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYM---VDAIMVPMDHKNLDKDV 94
G C+ HGH YTV +T+ G + G ++N + LK + D ++ DH++ +D
Sbjct: 35 GACSRVHGH--TYTVNITVAGDELDDSGFLVNFSVLKKLVHGNYDHTLL-NDHEDFSQDD 91
Query: 95 PYFADVVSTSENVAIFIWNNLKKIMKEPE---LLYEVKLYETDKNIVLYR 141
Y + T+E VA I++N++ + E +V + ET + +YR
Sbjct: 92 RY---SLPTTEVVAKTIYDNVQAYLDTLENKPTCVQVFVRETPTSYCVYR 138
>sp|Q1RHI6|QUED_RICBR 6-carboxy-5,6,7,8-tetrahydropterin synthase OS=Rickettsia bellii
(strain RML369-C) GN=queD PE=3 SV=1
Length = 138
Score = 36.2 bits (82), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 63/139 (45%), Gaps = 29/139 (20%)
Query: 12 TRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLN-- 69
TR +F A HR+ +NK Y HGH Y +E+T+ + E GMV++
Sbjct: 5 TRRIEFDAGHRI-----IGHQNKCQYL-------HGHRYVLEITIAAKNTDELGMVVDFG 52
Query: 70 -INDLKVYMVD-----AIMVPMDHKNLDKDVP-------YFADVVSTSENVAIFIWNNLK 116
I DL VD ++++ K + + + Y+ T+EN+A+ + N +
Sbjct: 53 LIKDLAKGWVDENFDHSLILHQGDKEIGQKIESHTGQKVYYLKNNPTAENIALHLKNEIF 112
Query: 117 KIMKEPELLY--EVKLYET 133
+ E + + +KL+ET
Sbjct: 113 PKLFESQKFFVTNIKLFET 131
>sp|Q92J44|QUED_RICCN 6-carboxy-5,6,7,8-tetrahydropterin synthase OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=queD PE=3 SV=2
Length = 138
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 63/139 (45%), Gaps = 29/139 (20%)
Query: 12 TRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLN-- 69
TR +F A HR+ + +NK + HGH Y +E+ + + + GMV++
Sbjct: 5 TRRIEFDAGHRI-----IEHQNKCQFL-------HGHRYVLEIAIAANKTDKLGMVIDFG 52
Query: 70 -INDLKVYMVD-----AIMVPMDHKNLDKDVP-------YFADVVSTSENVAIFIWNNL- 115
I DL +D ++++ D K + + + Y+ T+EN+A + N +
Sbjct: 53 LIKDLAKKWIDENFDHSLILHQDDKEMGQQIENCTGQKIYYMQNNPTAENIATHLKNEIF 112
Query: 116 -KKIMKEPELLYEVKLYET 133
K + + + +KLYET
Sbjct: 113 PKLFVSQNFFVTSLKLYET 131
>sp|Q55798|QUED_SYNY3 6-carboxy-5,6,7,8-tetrahydropterin synthase OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=queD PE=3 SV=1
Length = 129
Score = 34.7 bits (78), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 17/105 (16%)
Query: 16 KFSACHRLHSPHLTDEENKITYGKCNNFHGH---GHNYTVEVTLKGPISKERGMVLNIND 72
F A H+L PH GKC HGH G Y LK E GMV++ +
Sbjct: 9 SFEAAHQL--PHHE--------GKCRRLHGHSFRGRVYVASDRLK-TTGSETGMVMDFSV 57
Query: 73 LKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKK 117
LK ++ + +DH L+ + + TSE +A +I+ L++
Sbjct: 58 LKAHLDPLVKNHLDHYYLNDSLGLES---PTSEAIAAWIFAKLEE 99
>sp|Q9ZDY5|QUED_RICPR 6-carboxy-5,6,7,8-tetrahydropterin synthase OS=Rickettsia
prowazekii (strain Madrid E) GN=queD PE=3 SV=1
Length = 138
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 29/144 (20%)
Query: 12 TRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLN-- 69
TR F A HR+ +NK + HGH+Y +E+T+ + GMV++
Sbjct: 5 TRRINFDAGHRI-----IGHKNKCQFL-------HGHHYVLEITIAANKTDTLGMVIDFG 52
Query: 70 -INDLKVYMVDA-----IMVPMDHKNLDKDVP-------YFADVVSTSENVAIFIWNNL- 115
I +L +DA +++ D K + + + Y+ T+EN+A + N +
Sbjct: 53 LIKNLAKKWIDANFDHNLILHQDDKEMGQQIENYTRQKIYYMRNNPTAENIATHLKNEIF 112
Query: 116 -KKIMKEPELLYEVKLYETDKNIV 138
K + + + +KLYET V
Sbjct: 113 PKLFVSQNFFVTSLKLYETQNCFV 136
>sp|P09303|HELI_VZVD Probable ATP-dependent helicase 55 OS=Varicella-zoster virus
(strain Dumas) GN=ORF55 PE=3 SV=1
Length = 881
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 11/102 (10%)
Query: 21 HRLHSPHLTDEENKITYGKCN----NFHGHGHNYTVEVTLK-------GPISKERGMVLN 69
H + H+T EN +TY CN + HN+ + + K G + K L
Sbjct: 298 HDMQRSHVTPSENILTYIICNQTLRQYTNISHNWAIFINNKRCQEDDFGNLLKTLEYGLP 357
Query: 70 INDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFI 111
I + +VD +VP + N ++P + + S+ + V+ ++
Sbjct: 358 ITEAHARLVDTFVVPASYINNPANLPGWTRLYSSHKEVSAYM 399
>sp|Q9J3N5|HELI_VZVO Probable ATP-dependent helicase 55 OS=Varicella-zoster virus
(strain Oka vaccine) GN=ORF55 PE=3 SV=1
Length = 881
Score = 33.9 bits (76), Expect = 0.31, Method: Composition-based stats.
Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 11/102 (10%)
Query: 21 HRLHSPHLTDEENKITYGKCN----NFHGHGHNYTVEVTLK-------GPISKERGMVLN 69
H + H+T EN +TY CN + HN+ + + K G + K L
Sbjct: 298 HDMQRSHVTPSENILTYIICNQTLRQYTNISHNWAIFINNKRCQEDDFGNLLKTLEYGLP 357
Query: 70 INDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFI 111
I + +VD +VP + N ++P + + S+ + V+ ++
Sbjct: 358 ITEAHARLVDTFVVPASYINNPANLPGWTRLYSSHKEVSAYM 399
>sp|Q4UKI6|QUED_RICFE 6-carboxy-5,6,7,8-tetrahydropterin synthase OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=queD PE=3 SV=1
Length = 138
Score = 32.7 bits (73), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 62/139 (44%), Gaps = 29/139 (20%)
Query: 12 TRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLN-- 69
TR +F A HR+ +NK + HGH Y +E+ + + + GMV++
Sbjct: 5 TRRIEFDAGHRI-----IGHQNKCQFL-------HGHRYVLEIAIAANKTDKLGMVIDFG 52
Query: 70 -INDLKVYMVD-----AIMVPMDHKNLDKDVP-------YFADVVSTSENVAIFIWNNL- 115
I D+ +D ++++ D K + + + Y+ T+EN+A + N +
Sbjct: 53 LIKDVAKKWIDENFDHSLILHQDDKEMGQQIENCTGQKIYYMQNNPTAENIATHLKNEIF 112
Query: 116 -KKIMKEPELLYEVKLYET 133
K + + + +KLYET
Sbjct: 113 PKLFVGQNFFVSNLKLYET 131
>sp|O27296|QUED_METTH Putative 6-carboxy-5,6,7,8-tetrahydropterin synthase
OS=Methanothermobacter thermautotrophicus (strain ATCC
29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
GN=queD PE=3 SV=1
Length = 161
Score = 32.3 bits (72), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 46 HGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDHKNL 90
HGH+Y V+V ++G S + G V + D+K +V I DHK L
Sbjct: 33 HGHSYIVDVKVEGKRSGKHGFVADFKDVK-DIVRRICSEFDHKLL 76
>sp|Q9W698|1A1L1_TAKRU 1-aminocyclopropane-1-carboxylate synthase-like protein 1
OS=Takifugu rubripes GN=accs PE=3 SV=1
Length = 618
Score = 32.0 bits (71), Expect = 1.2, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
Query: 93 DVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYEVKLY 131
DVPY + A+F+W +L+K + EP E++L+
Sbjct: 417 DVPYL------DRSAAMFVWADLRKFLAEPSFEEEMRLW 449
>sp|Q3ZC91|ASM3A_BOVIN Acid sphingomyelinase-like phosphodiesterase 3a OS=Bos taurus
GN=SMPDL3A PE=2 SV=1
Length = 450
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 5/66 (7%)
Query: 4 SKVPIGYLTRVEKFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKE 63
+ VP+GYL SA + H+ L D K + F+GH H ++ V +S +
Sbjct: 248 AHVPVGYLPYARGISAMRKYHNEKLIDIFRKYSDIIAGQFYGHTHRDSIMV-----LSDK 302
Query: 64 RGMVLN 69
+G +N
Sbjct: 303 KGKPVN 308
>sp|Q9UXZ4|QUED_PYRAB Putative 6-carboxy-5,6,7,8-tetrahydropterin synthase
OS=Pyrococcus abyssi (strain GE5 / Orsay) GN=queD PE=3
SV=1
Length = 157
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 8/51 (15%)
Query: 38 GKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDHK 88
KC HGH Y VEV ++G E GM+ + N L ++ +DHK
Sbjct: 29 SKCRRLHGH--TYRVEVEIEGE-PNEHGMIFDFNHL-----SELIKTLDHK 71
>sp|O59602|QUED_PYRHO Putative 6-carboxy-5,6,7,8-tetrahydropterin synthase
OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM
12428 / JCM 9974 / NBRC 100139 / OT-3) GN=queD PE=3
SV=1
Length = 157
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 8/51 (15%)
Query: 38 GKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKVYMVDAIMVPMDHK 88
KC HGH Y VEV ++G +++E GM+ + L I+ +DH+
Sbjct: 29 SKCKRIHGH--TYKVEVEIEGELNEE-GMIFDFTHL-----SEIVKELDHR 71
>sp|P97608|OPLA_RAT 5-oxoprolinase OS=Rattus norvegicus GN=Oplah PE=1 SV=2
Length = 1288
Score = 30.4 bits (67), Expect = 3.3, Method: Composition-based stats.
Identities = 13/22 (59%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
Query: 122 PELLYEVKLYETDKNIVLYRGE 143
PE+LYE ++ E D+ +VLYRGE
Sbjct: 126 PEVLYE-EVLEVDERVVLYRGE 146
>sp|O84880|PMPH_CHLTR Probable outer membrane protein PmpH OS=Chlamydia trachomatis
(strain D/UW-3/Cx) GN=pmpH PE=2 SV=1
Length = 1016
Score = 30.0 bits (66), Expect = 4.6, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 18/32 (56%), Gaps = 3/32 (9%)
Query: 19 ACHRLHSPHLTDEENKITYGKCNNFHGHGHNY 50
+ HR+H+ + D+ K + KC H H +NY
Sbjct: 825 SVHRMHTQYFNDKTQKFDHSKC---HWHNNNY 853
>sp|Q9STT6|AB6A_ARATH ABC transporter A family member 6 OS=Arabidopsis thaliana GN=ABCA6
PE=3 SV=2
Length = 926
Score = 29.3 bits (64), Expect = 7.2, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 21 HRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLK 57
H L LT +E+ + YG+ N GH N VE +LK
Sbjct: 696 HDLLWETLTGKEHLLFYGRLKNLKGHDLNQAVEESLK 732
>sp|P34750|PILQ_PSEAE Fimbrial assembly protein PilQ OS=Pseudomonas aeruginosa (strain
ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=pilQ
PE=3 SV=2
Length = 714
Score = 29.3 bits (64), Expect = 8.1, Method: Composition-based stats.
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 10/81 (12%)
Query: 59 PISKERGMVLNINDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKI 118
P +E+G + ++ K + DA+ V +D K+ V F + + S+ +I I
Sbjct: 189 PDIQEQGGKIRLDFAKTQLPDALRVRLDVKDFATPVQ-FVNASAQSDRTSITI------- 240
Query: 119 MKEPELLYEVKLYETDKNIVL 139
EP LY+ +Y+TD + +
Sbjct: 241 --EPSGLYDYLVYQTDNRLTV 259
>sp|B0R9W7|QUED_HALS3 Probable 6-carboxy-5,6,7,8-tetrahydropterin synthase
OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671
/ R1) GN=queD PE=3 SV=1
Length = 150
Score = 29.3 bits (64), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 18/78 (23%)
Query: 16 KFSACHRLHSPHLTDEENKITYGKCNNFHGHGHNYTVEVTLKGPISKERGMVLNINDLKV 75
+ SA HRL GKC+ HGH NY + V + G ++ E G V++
Sbjct: 28 RISAGHRLQH----------HDGKCSRPHGH--NYEISVEITGQLTDE-GWVVDKG---- 70
Query: 76 YMVDAIMVPMDHKNLDKD 93
V A++ DH+ L +D
Sbjct: 71 -TVTAVVSDWDHRFLLED 87
>sp|A6SEV8|PRM1_BOTFB Plasma membrane fusion protein prm1 OS=Botryotinia fuckeliana
(strain B05.10) GN=prm1 PE=3 SV=1
Length = 794
Score = 28.9 bits (63), Expect = 9.9, Method: Composition-based stats.
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 70 INDLKVYMVDAIMVPMDHKNLDKDVPYFADVVSTSENVAIFIWNNLKKIMKEPELLYE 127
IN L +D + D L+ +P F V + ++N+ + +KK++ E + Y+
Sbjct: 238 INKLNSIQIDPTTMDADLAKLNASLPTFEQVQNFTDNIIKLPFEEVKKLVNESMIAYK 295
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,096,593
Number of Sequences: 539616
Number of extensions: 2091924
Number of successful extensions: 5819
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 5775
Number of HSP's gapped (non-prelim): 70
length of query: 143
length of database: 191,569,459
effective HSP length: 106
effective length of query: 37
effective length of database: 134,370,163
effective search space: 4971696031
effective search space used: 4971696031
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)