BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16343
(539 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 266 bits (680), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 139/249 (55%), Positives = 175/249 (70%), Gaps = 42/249 (16%)
Query: 45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQG 104
F+D+Y+L+ ++LG+GA+A VQTC+N++T EYAVKII+K PGH RSRVF+EVE + CQG
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 105 HPNIIQLLEYYEDDEN-----------------HER-----------------------H 124
H N+++L+E++E+++ H+R +
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN 129
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K IAHRDLKPENILC HP+Q+SPVK+CDFDLGSGIK N SP++TP LLTP GSAE+M
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC-SPISTPELLTPCGSAEYM 188
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 244
APE+V AF EAS YDKRCDLWSLGV++YILL GYPPF G CG DCGW RGE C ACQ
Sbjct: 189 APEVVEAF-SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
Query: 245 ILFHSIQQG 253
+LF SIQ+G
Sbjct: 248 MLFESIQEG 256
Score = 263 bits (671), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 126/190 (66%), Positives = 151/190 (79%), Gaps = 3/190 (1%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GIAHRDLKPENILC HP+Q+SPVK+CDFDLGSGIK N SP++TP LLTP GSAE+M
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDC-SPISTPELLTPCGSAEYM 188
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APE+V AF EAS YDKRCDLWSLGV++YILL GYPPF G CG DCGW RGE C ACQ
Sbjct: 189 APEVVEAF-SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
+LF SIQ+G Y+FP+ +W+ IS AKDLI +LLV+DA++RLSAA VL+HPW+ +
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPEN- 306
Query: 432 PLVTPQVIRR 441
L TP V++R
Sbjct: 307 TLPTPMVLQR 316
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 266 bits (679), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 133/249 (53%), Positives = 165/249 (66%), Gaps = 42/249 (16%)
Query: 45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQG 104
F+D+Y+L E+LG+GAYA VQ V++ EYAVKII+K GHSRSRVF+EVET + CQG
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQG 69
Query: 105 HPNIIQLLEYYEDDEN-----------------------HERH----------------- 124
+ NI++L+E++EDD +ER
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFLHT 129
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K IAHRDLKPENILC P+++SPVK+CDFDLGSG+K N S +P+ TP L TP GSAE+M
Sbjct: 130 KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSC-TPITTPELTTPCGSAEYM 188
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 244
APE+V F +A+ YDKRCDLWSLGVV+YI+L GYPPF G+CG DCGW RGE C CQ
Sbjct: 189 APEVVEVFT-DQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQN 247
Query: 245 ILFHSIQQG 253
LF SIQ+G
Sbjct: 248 KLFESIQEG 256
Score = 253 bits (645), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 114/172 (66%), Positives = 140/172 (81%), Gaps = 2/172 (1%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GIAHRDLKPENILC P+++SPVK+CDFDLGSG+K N S +P+ TP L TP GSAE+M
Sbjct: 130 KGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSC-TPITTPELTTPCGSAEYM 188
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APE+V F +A+ YDKRCDLWSLGVV+YI+L GYPPF G+CG DCGW RGE C CQ
Sbjct: 189 APEVVEVFT-DQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQN 247
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
LF SIQ+G Y+FP+ +W+ IS EAKDLI +LLV+DA++RLSAA VL+HPW+
Sbjct: 248 KLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWV 299
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 263 bits (673), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/249 (55%), Positives = 174/249 (69%), Gaps = 42/249 (16%)
Query: 45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQG 104
F+D+Y+L+ ++LG+GA+A VQTC+N++T EYAVKII+K PGH RSRVF+EVE + CQG
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 105 HPNIIQLLEYYEDDEN-----------------HER-----------------------H 124
H N+++L+E++E+++ H+R +
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHN 129
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K IAHRDLKPENILC HP+Q+SPVK+CDF LGSGIK N SP++TP LLTP GSAE+M
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDC-SPISTPELLTPCGSAEYM 188
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 244
APE+V AF EAS YDKRCDLWSLGV++YILL GYPPF G CG DCGW RGE C ACQ
Sbjct: 189 APEVVEAF-SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
Query: 245 ILFHSIQQG 253
+LF SIQ+G
Sbjct: 248 MLFESIQEG 256
Score = 260 bits (664), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 125/190 (65%), Positives = 150/190 (78%), Gaps = 3/190 (1%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GIAHRDLKPENILC HP+Q+SPVK+CDF LGSGIK N SP++TP LLTP GSAE+M
Sbjct: 130 KGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDC-SPISTPELLTPCGSAEYM 188
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APE+V AF EAS YDKRCDLWSLGV++YILL GYPPF G CG DCGW RGE C ACQ
Sbjct: 189 APEVVEAF-SEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
+LF SIQ+G Y+FP+ +W+ IS AKDLI +LLV+DA++RLSAA VL+HPW+ +
Sbjct: 248 MLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPEN- 306
Query: 432 PLVTPQVIRR 441
L TP V++R
Sbjct: 307 TLPTPMVLQR 316
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 137 bits (345), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 120/226 (53%), Gaps = 30/226 (13%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
HSI IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 177 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 228
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 229 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 268
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
A + I+ G Y+FP EWS +S+E K LIR LL + +R++ + HPWI +
Sbjct: 269 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 328
Query: 426 AGTAHRPLVTPQVIRRNQSARE-LSSFAESAMSANRVILQHFSICK 470
PL T +V++ ++ E + SA++ RV + I K
Sbjct: 329 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKK 374
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 102/228 (44%), Gaps = 66/228 (28%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
D Y++ ++LG G V N T+ ++A+K++ P R EVE P
Sbjct: 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR-----EVELHWRASQCP 115
Query: 107 NIIQLLEYYE-----------------------------DDENHERHK------------ 125
+I+++++ YE D ER
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 175
Query: 126 -----RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 176 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY-- 228
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 229 --YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG 268
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 120/226 (53%), Gaps = 30/226 (13%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
HSI IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 183 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 234
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 235 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 274
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
A + I+ G Y+FP EWS +S+E K LIR LL + +R++ + HPWI +
Sbjct: 275 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 334
Query: 426 AGTAHRPLVTPQVIRRNQSARE-LSSFAESAMSANRVILQHFSICK 470
PL T +V++ ++ E + SA++ RV + I K
Sbjct: 335 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKK 380
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 102/228 (44%), Gaps = 66/228 (28%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
D Y++ ++LG G V N T+ ++A+K++ P R EVE P
Sbjct: 67 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR-----EVELHWRASQCP 121
Query: 107 NIIQLLEYYE-----------------------------DDENHERHK------------ 125
+I+++++ YE D ER
Sbjct: 122 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 181
Query: 126 -----RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 182 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY-- 234
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 235 --YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG 274
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 137 bits (344), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 120/226 (53%), Gaps = 30/226 (13%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
HSI IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 133 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 184
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 185 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 224
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
A + I+ G Y+FP EWS +S+E K LIR LL + +R++ + HPWI +
Sbjct: 225 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 284
Query: 426 AGTAHRPLVTPQVIRRNQSARE-LSSFAESAMSANRVILQHFSICK 470
PL T +V++ ++ E + SA++ RV + I K
Sbjct: 285 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVDYEQIKIKK 330
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 102/228 (44%), Gaps = 66/228 (28%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
D Y++ ++LG G V N T+ ++A+K++ P R EVE P
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR-----EVELHWRASQCP 71
Query: 107 NIIQLLEYYE-----------------------------DDENHERHK------------ 125
+I+++++ YE D ER
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 126 -----RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 132 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY-- 184
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 185 --YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG 224
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 135 bits (339), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 117/217 (53%), Gaps = 30/217 (13%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
HSI IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 133 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 184
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 185 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 224
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
A + I+ G Y+FP EWS +S+E K LIR LL + +R++ + HPWI +
Sbjct: 225 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 284
Query: 426 AGTAHRPLVTPQVIRRNQSARE-LSSFAESAMSANRV 461
PL T +V++ ++ E + SA++ RV
Sbjct: 285 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRV 321
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 102/228 (44%), Gaps = 66/228 (28%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
D Y++ ++LG G V N T+ ++A+K++ P R EVE P
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR-----EVELHWRASQCP 71
Query: 107 NIIQLLEYYE-----------------------------DDENHERHK------------ 125
+I+++++ YE D ER
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 126 -----RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 132 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY-- 184
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 185 --YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG 224
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 113/211 (53%), Gaps = 29/211 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
IAHRD+KPEN+L ++ + +KL DF N L TP + ++A
Sbjct: 148 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA----------LQTPCYTPYYVA 197
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
PE+ +GPE YDK CD+WSLGV++YILLCG+PPFY N G+ A
Sbjct: 198 PEV----LGPEK--YDKSCDMWSLGVIMYILLCGFPPFYSNTGQ-----------AISPG 240
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA-HR 431
+ I+ G Y FP EWS +S++AK LIR LL D +RL+ + HPWI+ +
Sbjct: 241 MKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQT 300
Query: 432 PLVTPQVIRRNQSA-RELSSFAESAMSANRV 461
PL T +V++ ++ E+ SA++ RV
Sbjct: 301 PLHTARVLQEDKDHWDEVKEEMTSALATMRV 331
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 101/229 (44%), Gaps = 67/229 (29%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
D Y+L ++LG G V C + T + A+K++ P + +EV+ G P
Sbjct: 28 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGP 82
Query: 107 NIIQLLEYYEDDENHER------------------------------------------- 123
+I+ +L+ YE+ + +R
Sbjct: 83 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 142
Query: 124 ---HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
IAHRD+KPEN+L ++ + +KL DF N L TP +
Sbjct: 143 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA----------LQTPCYT 192
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 229
++APE+ +GPE YDK CD+WSLGV++YILLCG+PPFY N G+
Sbjct: 193 PYYVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGFPPFYSNTGQ 235
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 134 bits (336), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/211 (37%), Positives = 113/211 (53%), Gaps = 29/211 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
IAHRD+KPEN+L ++ + +KL DF N L TP + ++A
Sbjct: 129 NIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA----------LQTPCYTPYYVA 178
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
PE+ +GPE YDK CD+WSLGV++YILLCG+PPFY N G+ A
Sbjct: 179 PEV----LGPEK--YDKSCDMWSLGVIMYILLCGFPPFYSNTGQ-----------AISPG 221
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA-HR 431
+ I+ G Y FP EWS +S++AK LIR LL D +RL+ + HPWI+ +
Sbjct: 222 MKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVPQT 281
Query: 432 PLVTPQVIRRNQSA-RELSSFAESAMSANRV 461
PL T +V++ ++ E+ SA++ RV
Sbjct: 282 PLHTARVLQEDKDHWDEVKEEMTSALATMRV 312
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 101/229 (44%), Gaps = 67/229 (29%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
D Y+L ++LG G V C + T + A+K++ P + +EV+ G P
Sbjct: 9 DDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSP-----KARQEVDHHWQASGGP 63
Query: 107 NIIQLLEYYEDDENHER------------------------------------------- 123
+I+ +L+ YE+ + +R
Sbjct: 64 HIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQ 123
Query: 124 ---HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
IAHRD+KPEN+L ++ + +KL DF N L TP +
Sbjct: 124 FLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNA----------LQTPCYT 173
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 229
++APE+ +GPE YDK CD+WSLGV++YILLCG+PPFY N G+
Sbjct: 174 PYYVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGFPPFYSNTGQ 216
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 113/217 (52%), Gaps = 30/217 (13%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
HSI IAHRD+KPEN+L + +KL DF + S+ P TP
Sbjct: 131 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPY------ 182
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 183 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 222
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
A + I+ G Y+FP EWS +S+E K LIR LL + +R++ + HPWI +
Sbjct: 223 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 282
Query: 426 AGTAHRPLVTPQVIRRNQSARE-LSSFAESAMSANRV 461
PL T +V++ ++ E + SA++ RV
Sbjct: 283 TKVPQTPLHTSRVLKEDKERWEDVKEEMTSALATMRV 319
Score = 95.1 bits (235), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 98/228 (42%), Gaps = 66/228 (28%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
D Y++ ++LG G V N T+ ++A+K++ P R EVE P
Sbjct: 15 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR-----EVELHWRASQCP 69
Query: 107 NIIQLLEYYE-----------------------------DDENHERHK------------ 125
+I+++++ YE D ER
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 126 -----RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
IAHRD+KPEN+L + +KL DF + S+ P TP
Sbjct: 130 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYTPY------- 182
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 183 --YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG 222
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 110/202 (54%), Gaps = 29/202 (14%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
HSI IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 139 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 190
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 191 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 230
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
A + I+ G Y+FP EWS +S+E K LIR LL + +R++ + HPWI +
Sbjct: 231 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 290
Query: 426 AGTAHRPLVTPQVIRRNQSARE 447
PL T +V++ ++ E
Sbjct: 291 TKVPQTPLHTSRVLKEDKERWE 312
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 102/228 (44%), Gaps = 66/228 (28%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
D Y++ ++LG G V N T+ ++A+K++ P R EVE P
Sbjct: 23 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR-----EVELHWRASQCP 77
Query: 107 NIIQLLEYYE-----------------------------DDENHERHK------------ 125
+I+++++ YE D ER
Sbjct: 78 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 137
Query: 126 -----RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 138 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY-- 190
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 191 --YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG 230
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 110/202 (54%), Gaps = 29/202 (14%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
HSI IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 132 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 183
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 184 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 223
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
A + I+ G Y+FP EWS +S+E K LIR LL + +R++ + HPWI +
Sbjct: 224 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 283
Query: 426 AGTAHRPLVTPQVIRRNQSARE 447
PL T +V++ ++ E
Sbjct: 284 TKVPQTPLHTSRVLKEDKERWE 305
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 102/228 (44%), Gaps = 66/228 (28%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
D Y++ ++LG G V N T+ ++A+K++ P R EVE P
Sbjct: 16 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR-----EVELHWRASQCP 70
Query: 107 NIIQLLEYYE-----------------------------DDENHERHK------------ 125
+I+++++ YE D ER
Sbjct: 71 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 130
Query: 126 -----RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 131 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY-- 183
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 184 --YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG 223
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 110/202 (54%), Gaps = 29/202 (14%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
HSI IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 131 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 182
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 183 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 222
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
A + I+ G Y+FP EWS +S+E K LIR LL + +R++ + HPWI +
Sbjct: 223 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 282
Query: 426 AGTAHRPLVTPQVIRRNQSARE 447
PL T +V++ ++ E
Sbjct: 283 TKVPQTPLHTSRVLKEDKERWE 304
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 102/228 (44%), Gaps = 66/228 (28%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
D Y++ ++LG G V N T+ ++A+K++ P R EVE P
Sbjct: 15 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR-----EVELHWRASQCP 69
Query: 107 NIIQLLEYYE-----------------------------DDENHERHK------------ 125
+I+++++ YE D ER
Sbjct: 70 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 129
Query: 126 -----RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 130 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY-- 182
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 183 --YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG 222
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 110/202 (54%), Gaps = 29/202 (14%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
HSI IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 137 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 188
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 189 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 228
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
A + I+ G Y+FP EWS +S+E K LIR LL + +R++ + HPWI +
Sbjct: 229 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 288
Query: 426 AGTAHRPLVTPQVIRRNQSARE 447
PL T +V++ ++ E
Sbjct: 289 TKVPQTPLHTSRVLKEDKERWE 310
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 102/228 (44%), Gaps = 66/228 (28%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
D Y++ ++LG G V N T+ ++A+K++ P R EVE P
Sbjct: 21 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR-----EVELHWRASQCP 75
Query: 107 NIIQLLEYYE-----------------------------DDENHERHK------------ 125
+I+++++ YE D ER
Sbjct: 76 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 135
Query: 126 -----RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 136 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY-- 188
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 189 --YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG 228
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 110/202 (54%), Gaps = 29/202 (14%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
HSI IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 138 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 189
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 190 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 229
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
A + I+ G Y+FP EWS +S+E K LIR LL + +R++ + HPWI +
Sbjct: 230 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 289
Query: 426 AGTAHRPLVTPQVIRRNQSARE 447
PL T +V++ ++ E
Sbjct: 290 TKVPQTPLHTSRVLKEDKERWE 311
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 102/228 (44%), Gaps = 66/228 (28%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
D Y++ ++LG G V N T+ ++A+K++ P R EVE P
Sbjct: 22 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR-----EVELHWRASQCP 76
Query: 107 NIIQLLEYYE-----------------------------DDENHERHK------------ 125
+I+++++ YE D ER
Sbjct: 77 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 136
Query: 126 -----RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 137 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY-- 189
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 190 --YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG 229
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 133 bits (334), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 110/202 (54%), Gaps = 29/202 (14%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
HSI IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 147 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 198
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 199 ---YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG----------- 238
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
A + I+ G Y+FP EWS +S+E K LIR LL + +R++ + HPWI +
Sbjct: 239 LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 298
Query: 426 AGTAHRPLVTPQVIRRNQSARE 447
PL T +V++ ++ E
Sbjct: 299 TKVPQTPLHTSRVLKEDKERWE 320
Score = 97.1 bits (240), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 102/228 (44%), Gaps = 66/228 (28%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
D Y++ ++LG G V N T+ ++A+K++ P R EVE P
Sbjct: 31 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR-----EVELHWRASQCP 85
Query: 107 NIIQLLEYYE-----------------------------DDENHERHK------------ 125
+I+++++ YE D ER
Sbjct: 86 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 145
Query: 126 -----RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 146 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY-- 198
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
++APE+ +GPE YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 199 --YVAPEV----LGPEK--YDKSCDMWSLGVIMYILLCGYPPFYSNHG 238
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 87/226 (38%), Positives = 115/226 (50%), Gaps = 30/226 (13%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
HSI IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 177 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY- 228
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
++APE+ +GPE YDK CD WSLGV+ YILLCGYPPFY N G
Sbjct: 229 ---YVAPEV----LGPEK--YDKSCDXWSLGVIXYILLCGYPPFYSNHG----------- 268
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI-ST 425
A I+ G Y+FP EWS +S+E K LIR LL + +R + HPWI +
Sbjct: 269 LAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQS 328
Query: 426 AGTAHRPLVTPQVIRRNQSARE-LSSFAESAMSANRVILQHFSICK 470
PL T +V++ ++ E + SA++ RV + I K
Sbjct: 329 TKVPQTPLHTSRVLKEDKERWEDVKEEXTSALATMRVDYEQIKIKK 374
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/228 (32%), Positives = 99/228 (43%), Gaps = 66/228 (28%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
D Y++ ++LG G V N T+ ++A+K + P R EVE P
Sbjct: 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKXLQDCPKARR-----EVELHWRASQCP 115
Query: 107 NIIQLLEYYE-----------------------------DDENHERHK------------ 125
+I+++++ YE D ER
Sbjct: 116 HIVRIVDVYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQ 175
Query: 126 -----RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
IAHRD+KPEN+L + +KL DF G T+ H+ L TP TP
Sbjct: 176 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDF----GFAKETTSHNSLTTPCY-TPY-- 228
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
++APE+ +GPE YDK CD WSLGV+ YILLCGYPPFY N G
Sbjct: 229 --YVAPEV----LGPEK--YDKSCDXWSLGVIXYILLCGYPPFYSNHG 268
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 119/246 (48%), Gaps = 35/246 (14%)
Query: 233 WQRGETCHACQEIL---FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
+ + H Q+IL H GI HRDLKPEN+L + + VKL DF L ++ +
Sbjct: 100 YSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD 159
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
A G+ +++PE++ Y K D+W+ GV++YILL GYPP
Sbjct: 160 QQAWFGFA--------GTPGYLSPEVLRK------DPYGKPVDMWACGVILYILLVGYPP 205
Query: 350 FYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDAR 409
F+ ED Q L+ I+ G YDFP EW T++ EAKDLI ++L +
Sbjct: 206 FWD---ED------------QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPA 250
Query: 410 KRLSAASVLKHPWI---STAGTAHRPLVTPQVIRRNQSARELSSFAESAMSANRVILQHF 466
KR++A+ LKHPWI ST + T +++ + R+L + M A R
Sbjct: 251 KRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTMLATRNFSAAK 310
Query: 467 SICKNP 472
S+ K P
Sbjct: 311 SLLKKP 316
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 98/220 (44%), Gaps = 58/220 (26%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEVETFHHCQG 104
D Y+L E LGKGA++ V+ C+ I T EYA KII+ KL ++ +E +
Sbjct: 4 DEYQLFEE-LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK- 61
Query: 105 HPNIIQL----------------------------LEYYEDDE------------NHERH 124
HPNI++L EYY + + NH
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
I HRDLKPEN+L + + VKL DF L ++ + A G+ ++
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--------GTPGYL 173
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
+PE++ Y K D+W+ GV++YILL GYPPF+
Sbjct: 174 SPEVLRK------DPYGKPVDMWACGVILYILLVGYPPFW 207
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 125 bits (315), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/246 (34%), Positives = 121/246 (49%), Gaps = 41/246 (16%)
Query: 233 WQRGETCHACQEIL---FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
+ + H Q+IL H Q G+ HR+LKPEN+L + + VKL DF L ++
Sbjct: 107 YSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGE 166
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
A G+ +++PE++ Y K DLW+ GV++YILL GYPP
Sbjct: 167 QQAWFGFA--------GTPGYLSPEVLRK------DPYGKPVDLWACGVILYILLVGYPP 212
Query: 350 FYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDAR 409
F+ ED Q L+ I+ G YDFP EW T++ EAKDLI ++L +
Sbjct: 213 FWD---ED------------QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPS 257
Query: 410 KRLSAASVLKHPWISTAGTA----HRPLVTPQVIRRNQSARELSSFAESAMSANRVILQH 465
KR++AA LKHPWIS T HR T +++ + R+L + M A R +
Sbjct: 258 KRITAAEALKHPWISHRSTVASCMHRQ-ETVDCLKKFNARRKLKGAILTVMLATR----N 312
Query: 466 FSICKN 471
FS+ K
Sbjct: 313 FSVRKQ 318
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 99/228 (43%), Gaps = 58/228 (25%)
Query: 39 SLVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEV 96
++ + F + Y+L E LGKGA++ V+ CV +L EYA II+ KL ++ +E
Sbjct: 3 TITCTRFTEEYQLFEE-LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREA 61
Query: 97 ETFHHCQGHPNIIQL----------------------------LEYYEDDEN-------- 120
+ HPNI++L EYY + +
Sbjct: 62 RICRLLK-HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQIL 120
Query: 121 ----HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 176
H + HR+LKPEN+L + + VKL DF L ++ A
Sbjct: 121 EAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA------ 174
Query: 177 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
G+ +++PE++ Y K DLW+ GV++YILL GYPPF+
Sbjct: 175 --GTPGYLSPEVLRK------DPYGKPVDLWACGVILYILLVGYPPFW 214
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 102/199 (51%), Gaps = 32/199 (16%)
Query: 233 WQRGETCHACQEIL---FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
+ + H Q+IL H Q G+ HRDLKPEN+L + + VKL DF L ++
Sbjct: 118 YSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGE 177
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
A G+ +++PE++ Y K DLW+ GV++YILL GYPP
Sbjct: 178 QQAWFGFA--------GTPGYLSPEVLRK------DPYGKPVDLWACGVILYILLVGYPP 223
Query: 350 FYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDAR 409
F+ ED Q L+ I+ G YDFP EW T++ EAKDLI ++L +
Sbjct: 224 FWD---ED------------QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPS 268
Query: 410 KRLSAASVLKHPWISTAGT 428
KR++AA LKHPWIS T
Sbjct: 269 KRITAAEALKHPWISHRST 287
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 98/222 (44%), Gaps = 58/222 (26%)
Query: 45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEVETFHHC 102
FQ +Y+L E LGKGA++ V+ CV +L EYA KII+ KL ++ +E
Sbjct: 20 FQSMYQLFEE-LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLL 78
Query: 103 QGHPNIIQL----------------------------LEYYEDDEN------------HE 122
+ HPNI++L EYY + + H
Sbjct: 79 K-HPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHC 137
Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRDLKPEN+L + + VKL DF L ++ A G+
Sbjct: 138 HQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--------GTPG 189
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
+++PE++ Y K DLW+ GV++YILL GYPPF+
Sbjct: 190 YLSPEVLRK------DPYGKPVDLWACGVILYILLVGYPPFW 225
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/230 (33%), Positives = 113/230 (49%), Gaps = 35/230 (15%)
Query: 233 WQRGETCHACQEIL---FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
+ + H Q+IL H GI HRDLKPEN+L + + VKL DF L ++ +
Sbjct: 100 YSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGD 159
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
A G+ +++PE++ Y K D+W+ GV++YILL GYPP
Sbjct: 160 QQAWFGFA--------GTPGYLSPEVLRK------DPYGKPVDMWACGVILYILLVGYPP 205
Query: 350 FYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDAR 409
F+ ED Q L+ I+ G YDFP EW T++ EAKDLI ++L +
Sbjct: 206 FWD---ED------------QHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPA 250
Query: 410 KRLSAASVLKHPWI---STAGTAHRPLVTPQVIRRNQSARELSSFAESAM 456
KR++A+ LKHPWI ST + T +++ + R+L + M
Sbjct: 251 KRITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTM 300
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 98/220 (44%), Gaps = 58/220 (26%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEVETFHHCQG 104
D Y+L E LGKGA++ V+ C+ I T EYA KII+ KL ++ +E +
Sbjct: 4 DEYQLFEE-LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLK- 61
Query: 105 HPNIIQL----------------------------LEYYEDDE------------NHERH 124
HPNI++L EYY + + NH
Sbjct: 62 HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHL 121
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
I HRDLKPEN+L + + VKL DF L ++ + A G+ ++
Sbjct: 122 NGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFGFA--------GTPGYL 173
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
+PE++ Y K D+W+ GV++YILL GYPPF+
Sbjct: 174 SPEVLRK------DPYGKPVDMWACGVILYILLVGYPPFW 207
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 97/173 (56%), Gaps = 31/173 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ I HRDLKPEN+L ++ + +K+ DF L + + + L G+A +
Sbjct: 154 KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL---------GTAYY 204
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE++ YD++CD+WS+GV+++ILL GYPPF G Q
Sbjct: 205 IAPEVLR-------KKYDEKCDVWSIGVILFILLAGYPPFGGQTD--------------Q 243
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
EIL +++G Y F EW +S+ AKDLI+++L D+++R+SA L+HPWI
Sbjct: 244 EIL-RKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWI 295
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 59/218 (27%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHPNIIQLLE 113
LG GAY V C + +T +E A+KII K + S S++ +EV HPNI++L +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD-HPNIMKLYD 103
Query: 114 YYEDDENH-----------------ERHK-----------------------RIAHRDLK 133
++ED N+ R K I HRDLK
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLK 163
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L ++ + +K+ DF L + + + L G+A ++APE++
Sbjct: 164 PENLLLESKEKDALIKIVDFGLSAVFENQKKMKERL---------GTAYYIAPEVLR--- 211
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
YD++CD+WS+GV+++ILL GYPPF G ++
Sbjct: 212 ----KKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEI 245
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 112/223 (50%), Gaps = 35/223 (15%)
Query: 233 WQRGETCHACQEIL---FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
+ + H Q+IL H Q G+ HRDLKPEN+L + + VKL DF L ++ +
Sbjct: 100 YSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGD 159
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
A G+ +++PE++ Y K D+W+ GV++YILL GYPP
Sbjct: 160 QQAWFGFA--------GTPGYLSPEVLRK------EAYGKPVDIWACGVILYILLVGYPP 205
Query: 350 FYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDAR 409
F+ ED Q L+ I+ G YDFP EW T++ EAK+LI ++L +
Sbjct: 206 FWD---ED------------QHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPA 250
Query: 410 KRLSAASVLKHPWI---STAGTAHRPLVTPQVIRRNQSARELS 449
KR++A LKHPW+ ST + T + +++ + R+L
Sbjct: 251 KRITAHEALKHPWVCQRSTVASMMHRQETVECLKKFNARRKLK 293
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 96/220 (43%), Gaps = 58/220 (26%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEVETFHHCQG 104
D Y+L +I GKGA++ V+ CV + T EYA KII+ KL ++ +E +
Sbjct: 4 DEYQLYEDI-GKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLK- 61
Query: 105 HPNIIQL----------------------------LEYYEDDEN------------HERH 124
H NI++L EYY + + H
Sbjct: 62 HSNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQ 121
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
+ HRDLKPEN+L + + VKL DF L ++ + A G+ ++
Sbjct: 122 MGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFA--------GTPGYL 173
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
+PE++ Y K D+W+ GV++YILL GYPPF+
Sbjct: 174 SPEVLRK------EAYGKPVDIWACGVILYILLVGYPPFW 207
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 92/173 (53%), Gaps = 31/173 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ I HRDLKPENIL ++ +K+ DF L + + NT + +G+A +
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---------IGTAYY 189
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE++ YD++CD+WS GV++YILL G PPFYG D
Sbjct: 190 IAPEVLRG-------TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------------- 229
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
+ ++ G Y F +W TISD+AKDLIR++L R++A L+HPWI
Sbjct: 230 --ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 108/226 (47%), Gaps = 60/226 (26%)
Query: 55 ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSR--SRVFKEVETFHHCQGHPNIIQLL 112
+LGKG++ V C + +T+ EYAVK+I+K ++ S + +EVE HPNI++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLF 87
Query: 113 EYYED-----------------DENHERHK-----------------------RIAHRDL 132
E ED DE +R + I HRDL
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF 192
KPENIL ++ +K+ DF L + + NT + +G+A ++APE++
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---------IGTAYYIAPEVLRG- 197
Query: 193 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 238
YD++CD+WS GV++YILL G PPFYG D +R ET
Sbjct: 198 ------TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKRVET 236
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 93/173 (53%), Gaps = 27/173 (15%)
Query: 252 QGIAHRDLKPENILCV-HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
QG+ HRDLKP NIL V +++CDF ++ LL+TP +A F
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG--------LLMTPCYTANF 186
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE++ E GYD CD+WSLGV++Y +L GY PF N +D
Sbjct: 187 VAPEVL------ERQGYDAACDIWSLGVLLYTMLTGYTPF-ANGPDDT-----------P 228
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
E + I G + G W+++SD AKDL+ ++L D +RL+AA VL+HPWI
Sbjct: 229 EEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 101/220 (45%), Gaps = 60/220 (27%)
Query: 45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQG 104
F D Y +K +I G G+Y+ + C++ T +E+AVKIIDK S+ +E+E
Sbjct: 20 FTDGYEVKEDI-GVGSYSVCKRCIHKATNMEFAVKIIDK----SKRDPTEEIEILLRYGQ 74
Query: 105 HPNIIQLLEYYEDDEN-----------------------HERH----------------- 124
HPNII L + Y+D + ER
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 125 KRIAHRDLKPENILCV-HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
+ + HRDLKP NIL V +++CDF ++ LL+TP +A F
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG--------LLMTPCYTANF 186
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+APE++ E GYD CD+WSLGV++Y +L GY PF
Sbjct: 187 VAPEVL------ERQGYDAACDIWSLGVLLYTMLTGYTPF 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 118 bits (296), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 105/209 (50%), Gaps = 34/209 (16%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ GI HRDLKPEN+L + P++ S + + DF L S ++ N ++ T G+ +
Sbjct: 124 ENGIVHRDLKPENLLYLTPEENSKIMITDFGL-SKMEQNG---------IMSTACGTPGY 173
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE++ Y K D WS+GV+ YILLCGYPPFY +
Sbjct: 174 VAPEVL------AQKPYSKAVDCWSIGVITYILLCGYPPFY---------------EETE 212
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
LF I++G+Y+F W IS+ AKD I LL KD +R + L HPWI H
Sbjct: 213 SKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALSHPWIDGNTALH 272
Query: 431 R---PLVTPQVIRRNQSARELSSFAESAM 456
R P V+ Q+ + ++ +F +A+
Sbjct: 273 RDIYPSVSLQIQKNFAKSKWRQAFNAAAV 301
Score = 82.0 bits (201), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 92/211 (43%), Gaps = 57/211 (27%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLE 113
E+LG GA++ V LT +A+K I K P S + E+ + H NI+ L +
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIK-HENIVTLED 73
Query: 114 YYEDDENH-----------------ER-----------------------HKRIAHRDLK 133
YE ++ ER I HRDLK
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLK 133
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L + P++ S + + DF L S ++ N ++ T G+ ++APE++
Sbjct: 134 PENLLYLTPEENSKIMITDFGL-SKMEQNG---------IMSTACGTPGYVAPEVL---- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
Y K D WS+GV+ YILLCGYPPFY
Sbjct: 180 --AQKPYSKAVDCWSIGVITYILLCGYPPFY 208
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 92/173 (53%), Gaps = 31/173 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ I HRDLKPENIL ++ +K+ DF L + + NT + +G+A +
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---------IGTAYY 189
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE++ YD++CD+WS GV++YILL G PPFYG D
Sbjct: 190 IAPEVLRG-------TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------------- 229
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
+ ++ G Y F +W TISD+AKDLIR++L R++A L+HPWI
Sbjct: 230 --ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 108/226 (47%), Gaps = 60/226 (26%)
Query: 55 ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSR--SRVFKEVETFHHCQGHPNIIQLL 112
+LGKG++ V C + +T+ EYAVK+I+K ++ S + +EVE HPNI++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLF 87
Query: 113 EYYED-----------------DENHERHK-----------------------RIAHRDL 132
E ED DE +R + I HRDL
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF 192
KPENIL ++ +K+ DF L + + NT + +G+A ++APE++
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---------IGTAYYIAPEVLRG- 197
Query: 193 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 238
YD++CD+WS GV++YILL G PPFYG D +R ET
Sbjct: 198 ------TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKRVET 236
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 63/173 (36%), Positives = 92/173 (53%), Gaps = 31/173 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ I HRDLKPENIL ++ +K+ DF L + + NT + +G+A +
Sbjct: 139 KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---------IGTAYY 189
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE++ YD++CD+WS GV++YILL G PPFYG D
Sbjct: 190 IAPEVLRG-------TYDEKCDVWSAGVILYILLSGTPPFYGKNEYD------------- 229
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
+ ++ G Y F +W TISD+AKDLIR++L R++A L+HPWI
Sbjct: 230 --ILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWI 280
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 108/226 (47%), Gaps = 60/226 (26%)
Query: 55 ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSR--SRVFKEVETFHHCQGHPNIIQLL 112
+LGKG++ V C + +T+ EYAVK+I+K ++ S + +EVE HPNI++L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD-HPNIMKLF 87
Query: 113 EYYED-----------------DENHERHK-----------------------RIAHRDL 132
E ED DE +R + I HRDL
Sbjct: 88 EILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDL 147
Query: 133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF 192
KPENIL ++ +K+ DF L + + NT + +G+A ++APE++
Sbjct: 148 KPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---------IGTAYYIAPEVLRG- 197
Query: 193 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 238
YD++CD+WS GV++YILL G PPFYG D +R ET
Sbjct: 198 ------TYDEKCDVWSAGVILYILLSGTPPFYGKNEYDI-LKRVET 236
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 118 bits (295), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 121/263 (46%), Gaps = 52/263 (19%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ + D V++ + L + E E ++IL HS+Q I
Sbjct: 83 YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +K+ DF L I F + TP EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
++ +Y+F + +S S AKD IRRLLVKD +KR++ L+HPWI +P
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI-------KP 277
Query: 433 LVTPQVIRRNQSARELSSFAESA 455
T Q + R SA + F + A
Sbjct: 278 KDTQQALSRKASAVNMEKFKKFA 300
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 100/233 (42%), Gaps = 65/233 (27%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETFH 100
D Y GE LG G +A V+ C T L+YA K I K G SR + +EV
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 101 HCQGHPNIIQLLEYYE----------------------------DDENHERHKRI----- 127
Q HPN+I L E YE ++E E K+I
Sbjct: 70 EIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 128 -------AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
AH DLKPENI+ + + P +K+ DF L I F + TP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP------- 181
Query: 180 SAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 182 --EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/224 (33%), Positives = 110/224 (49%), Gaps = 32/224 (14%)
Query: 240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 299
H E + H Q I HRDLKPEN+L + + VKL DF L ++ A
Sbjct: 137 HQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA-- 194
Query: 300 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG 359
G+ +++PE++ Y K D+W+ GV++YILL GYPPF+ ED
Sbjct: 195 ------GTPGYLSPEVLRK------DPYGKPVDIWACGVILYILLVGYPPFWD---ED-- 237
Query: 360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK 419
Q L+ I+ G YDFP EW T++ EAK+LI ++L + KR++A LK
Sbjct: 238 ----------QHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALK 287
Query: 420 HPWI---STAGTAHRPLVTPQVIRRNQSARELSSFAESAMSANR 460
HPW+ ST + T + +R+ + R+L + M +R
Sbjct: 288 HPWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILTTMLVSR 331
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 96/222 (43%), Gaps = 58/222 (26%)
Query: 45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEVETFHHC 102
F D Y+L E LGKGA++ V+ CV EYA KII+ KL ++ +E
Sbjct: 29 FTDDYQLFEE-LGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLL 87
Query: 103 QGHPNIIQL----------------------------LEYYEDDE------------NHE 122
+ HPNI++L EYY + + NH
Sbjct: 88 K-HPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHI 146
Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
I HRDLKPEN+L + + VKL DF L ++ A G+
Sbjct: 147 HQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFA--------GTPG 198
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
+++PE++ Y K D+W+ GV++YILL GYPPF+
Sbjct: 199 YLSPEVLRK------DPYGKPVDIWACGVILYILLVGYPPFW 234
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 93/173 (53%), Gaps = 31/173 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ I HRDLKPEN+L + + +K+ DF L + + + L G+A +
Sbjct: 122 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL---------GTAYY 172
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE++ YD++CD+WS GV++YILLCGYPPF G Q
Sbjct: 173 IAPEVLR-------KKYDEKCDVWSCGVILYILLCGYPPFGGQTD--------------Q 211
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
EIL +++G + F +W+ +SDEAK L++ +L + KR+SA L HPWI
Sbjct: 212 EIL-KRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 263
Score = 99.8 bits (247), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 97/218 (44%), Gaps = 60/218 (27%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSR---VFKEVETFHHCQGHPNIIQLL 112
LG GAY V C + LT E A+KII K + S + EV HPNI++L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HPNIMKLY 70
Query: 113 EYYEDDENHE-----------------RHK-----------------------RIAHRDL 132
E++ED N+ R K I HRDL
Sbjct: 71 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDL 130
Query: 133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF 192
KPEN+L + + +K+ DF L + + + L G+A ++APE++
Sbjct: 131 KPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL---------GTAYYIAPEVLR-- 179
Query: 193 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
YD++CD+WS GV++YILLCGYPPF G ++
Sbjct: 180 -----KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQE 212
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/173 (35%), Positives = 93/173 (53%), Gaps = 31/173 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ I HRDLKPEN+L + + +K+ DF L + + + L G+A +
Sbjct: 139 KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL---------GTAYY 189
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE++ YD++CD+WS GV++YILLCGYPPF G Q
Sbjct: 190 IAPEVLR-------KKYDEKCDVWSCGVILYILLCGYPPFGGQTD--------------Q 228
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
EIL +++G + F +W+ +SDEAK L++ +L + KR+SA L HPWI
Sbjct: 229 EIL-KRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 97/218 (44%), Gaps = 60/218 (27%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSR---VFKEVETFHHCQGHPNIIQLL 112
LG GAY V C + LT E A+KII K + S + EV HPNI++L
Sbjct: 29 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD-HPNIMKLY 87
Query: 113 EYYEDDENHE-----------------RHK-----------------------RIAHRDL 132
E++ED N+ R K I HRDL
Sbjct: 88 EFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDL 147
Query: 133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF 192
KPEN+L + + +K+ DF L + + + L G+A ++APE++
Sbjct: 148 KPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERL---------GTAYYIAPEVLR-- 196
Query: 193 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
YD++CD+WS GV++YILLCGYPPF G ++
Sbjct: 197 -----KKYDEKCDVWSCGVILYILLCGYPPFGGQTDQE 229
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 31/174 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ I HRD+KPENIL + + L +K+ DF L S + + L G+A +
Sbjct: 164 KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL---------GTAYY 214
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE++ Y+++CD+WS GV++YILLCGYPPF G +D
Sbjct: 215 IAPEVL-------KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD------------- 254
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
+ +++G Y F +W ISDEAK+LI+ +L D KR +A L WI
Sbjct: 255 --IIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIK 306
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/227 (31%), Positives = 97/227 (42%), Gaps = 68/227 (29%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHH----------CQ 103
LG GAY V C E A+K+I K S K +E FH
Sbjct: 44 LGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSL 103
Query: 104 GHPNIIQLLEYYEDD-------ENHE----------RHK--------------------- 125
HPNII+L + +ED E +E RHK
Sbjct: 104 DHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSGICYLH 163
Query: 126 --RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
I HRD+KPENIL + + L +K+ DF L S + + L G+A +
Sbjct: 164 KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL---------GTAYY 214
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
+APE++ Y+++CD+WS GV++YILLCGYPPF G +D
Sbjct: 215 IAPEVL-------KKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQD 254
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 115 bits (288), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 121/261 (46%), Gaps = 52/261 (19%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ R D VV+ + L + + E ++IL H+ + I
Sbjct: 84 YENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT--KKI 136
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +KL DF L I+ + TP EF+AP
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP---------EFVAP 187
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 188 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 226
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
+I YDF E +S S+ AKD IR+LLVK+ RKRL+ L+HPWI+ P
Sbjct: 227 -LANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT-------P 278
Query: 433 LVTPQVIRRNQSARELSSFAE 453
+ T Q + R +S L +F +
Sbjct: 279 VDTQQAMVRRESVVNLENFKK 299
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 99/234 (42%), Gaps = 66/234 (28%)
Query: 46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS------RSRVFKEVETF 99
+D Y + GE LG G +A V+ C T LEYA K I K + R + +EV
Sbjct: 11 EDFYDI-GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSIL 69
Query: 100 HHCQGHPNIIQLLEYYE----------------------------------------DDE 119
HPNII L + YE D
Sbjct: 70 RQVL-HPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGV 128
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
N+ K+IAH DLKPENI+ + + P +KL DF L I+ + TP
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP------ 182
Query: 179 GSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 183 ---EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 115 bits (288), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 117/253 (46%), Gaps = 52/253 (20%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ + D V++ + L + E E ++IL HS+Q I
Sbjct: 83 YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +K+ DF L I F + TP EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
++ +Y+F + +S S AKD IRRLLVKD +KR++ L+HPWI +P
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI-------KP 277
Query: 433 LVTPQVIRRNQSA 445
T Q + R SA
Sbjct: 278 KDTQQALSRKASA 290
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 100/233 (42%), Gaps = 65/233 (27%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETFH 100
D Y GE LG G +A V+ C T L+YA K I K G SR + +EV
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 101 HCQGHPNIIQLLEYYE----------------------------DDENHERHKRI----- 127
Q HPN+I L E YE ++E E K+I
Sbjct: 70 EIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 128 -------AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
AH DLKPENI+ + + P +K+ DF L I F + TP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP------- 181
Query: 180 SAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 182 --EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 115 bits (287), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 117/253 (46%), Gaps = 52/253 (20%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ + D V++ + L + E E ++IL HS+Q I
Sbjct: 83 YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +K+ DF L I F + TP EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
++ +Y+F + +S S AKD IRRLLVKD +KR++ L+HPWI +P
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI-------KP 277
Query: 433 LVTPQVIRRNQSA 445
T Q + R SA
Sbjct: 278 KDTQQALSRKASA 290
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 100/233 (42%), Gaps = 65/233 (27%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETFH 100
D Y GE LG G +A V+ C T L+YA K I K G SR + +EV
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 101 HCQGHPNIIQLLEYYE----------------------------DDENHERHKRI----- 127
Q HPN+I L E YE ++E E K+I
Sbjct: 70 EIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 128 -------AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
AH DLKPENI+ + + P +K+ DF L I F + TP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP------- 181
Query: 180 SAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 182 --EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/253 (32%), Positives = 117/253 (46%), Gaps = 52/253 (20%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ + D V++ + L + E E ++IL HS+Q I
Sbjct: 83 YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +K+ DF L I F + TP EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
++ +Y+F + +S S AKD IRRLLVKD +KR++ L+HPWI +P
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI-------KP 277
Query: 433 LVTPQVIRRNQSA 445
T Q + R SA
Sbjct: 278 KDTQQALSRKASA 290
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 100/233 (42%), Gaps = 65/233 (27%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETFH 100
D Y GE LG G +A V+ C T L+YA K I K G SR + +EV
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 101 HCQGHPNIIQLLEYYE----------------------------DDENHERHKRI----- 127
Q HPN+I L E YE ++E E K+I
Sbjct: 70 EIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 128 -------AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
AH DLKPENI+ + + P +K+ DF L I F + TP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP------- 181
Query: 180 SAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 182 --EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 66/173 (38%), Positives = 90/173 (52%), Gaps = 27/173 (15%)
Query: 252 QGIAHRDLKPENILCV-HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
QG+ HRDLKP NIL V +++CDF ++ LL TP +A F
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG--------LLXTPCYTANF 186
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE++ E GYD CD+WSLGV++Y L GY PF N +D
Sbjct: 187 VAPEVL------ERQGYDAACDIWSLGVLLYTXLTGYTPF-ANGPDDT-----------P 228
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
E + I G + G W+++SD AKDL+ + L D +RL+AA VL+HPWI
Sbjct: 229 EEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/220 (31%), Positives = 98/220 (44%), Gaps = 60/220 (27%)
Query: 45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQG 104
F D Y +K +I G G+Y+ + C++ T E+AVKIIDK S+ +E+E
Sbjct: 20 FTDGYEVKEDI-GVGSYSVCKRCIHKATNXEFAVKIIDK----SKRDPTEEIEILLRYGQ 74
Query: 105 HPNIIQLLEYYEDDEN-----------------------HERH----------------- 124
HPNII L + Y+D + ER
Sbjct: 75 HPNIITLKDVYDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHA 134
Query: 125 KRIAHRDLKPENILCV-HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
+ + HRDLKP NIL V +++CDF ++ LL TP +A F
Sbjct: 135 QGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG--------LLXTPCYTANF 186
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+APE++ E GYD CD+WSLGV++Y L GY PF
Sbjct: 187 VAPEVL------ERQGYDAACDIWSLGVLLYTXLTGYTPF 220
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 98/175 (56%), Gaps = 29/175 (16%)
Query: 252 QGIAHRDLKPENILCVHPDQLSP--VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 309
QG+ HRDLKP NIL V + +P +++CDF ++ LL+TP +A
Sbjct: 140 QGVVHRDLKPSNILYVD-ESGNPECLRICDFGFAKQLRAENG--------LLMTPCYTAN 190
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
F+APE++ + GYD+ CD+WSLG+++Y +L GY PF N D
Sbjct: 191 FVAPEVL------KRQGYDEGCDIWSLGILLYTMLAGYTPF-ANGPSD----------TP 233
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
+EIL I G + G W+T+S+ AKDL+ ++L D +RL+A VL+HPW++
Sbjct: 234 EEILTR-IGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVT 287
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 106/222 (47%), Gaps = 62/222 (27%)
Query: 44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ 103
F D Y +K E +G G+Y+ + CV+ T +EYAVK+IDK S+ +E+E
Sbjct: 24 VFSDGYVVK-ETIGVGSYSECKRCVHKATNMEYAVKVIDK----SKRDPSEEIEILLRYG 78
Query: 104 GHPNIIQLLEYYEDDEN-----------------------HERH---------------- 124
HPNII L + Y+D ++ ER
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 125 -KRIAHRDLKPENILCVHPDQLSP--VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
+ + HRDLKP NIL V + +P +++CDF ++ LL+TP +A
Sbjct: 139 SQGVVHRDLKPSNILYVD-ESGNPECLRICDFGFAKQLRAENG--------LLMTPCYTA 189
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
F+APE++ + GYD+ CD+WSLG+++Y +L GY PF
Sbjct: 190 NFVAPEVL------KRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 31/171 (18%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+AHRDLKPEN L + SP+KL DF L + K ++ T VG+ +++
Sbjct: 143 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK---------PGKMMRTKVGTPYYVS 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
P+++ GPE CD WS GV++Y+LLCGYPPF + E+
Sbjct: 194 PQVLEGLYGPE-------CDEWSAGVMMYVLLCGYPPF--------------SAPTDXEV 232
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
+ I++G + FPE +W +S +A+ LIRRLL K ++R+++ L+H W
Sbjct: 233 ML-KIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWF 282
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 94/208 (45%), Gaps = 57/208 (27%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYY 115
+G+G++ V+ V T + A K I K R +E+E HPNII+L E +
Sbjct: 34 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD-HPNIIRLYETF 92
Query: 116 EDD-------------ENHER--HKRI-------------------------AHRDLKPE 135
ED+ E ER HKR+ AHRDLKPE
Sbjct: 93 EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPE 152
Query: 136 NILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP 195
N L + SP+KL DF L + K ++ T VG+ +++P+++ GP
Sbjct: 153 NFLFLTDSPDSPLKLIDFGLAARFK---------PGKMMRTKVGTPYYVSPQVLEGLYGP 203
Query: 196 EASGYDKRCDLWSLGVVVYILLCGYPPF 223
E CD WS GV++Y+LLCGYPPF
Sbjct: 204 E-------CDEWSAGVMMYVLLCGYPPF 224
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 119/259 (45%), Gaps = 52/259 (20%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ R D VV+ + L + + E ++IL H+ + I
Sbjct: 84 YENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT--KKI 136
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +KL DF L I+ + TP EF+AP
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP---------EFVAP 187
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 188 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 226
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
+I YDF E +S S+ AKD IR+LLVK+ RKRL+ L+HPWI+ P
Sbjct: 227 -LANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT-------P 278
Query: 433 LVTPQVIRRNQSARELSSF 451
+ Q + R +S L +F
Sbjct: 279 VDNQQAMVRRESVVNLENF 297
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 99/234 (42%), Gaps = 66/234 (28%)
Query: 46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETF 99
+D Y + GE LG G +A V+ C T LEYA K I K G SR + +EV
Sbjct: 11 EDFYDI-GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 100 HHCQGHPNIIQLLEYYE----------------------------------------DDE 119
H N+I L + YE D
Sbjct: 70 RQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGV 128
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
N+ K+IAH DLKPENI+ + + P +KL DF L I+ + TP
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP------ 182
Query: 179 GSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 183 ---EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 108/213 (50%), Gaps = 32/213 (15%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ GI HRDLKPEN+L P +P+K+ DF L ++ L+ T G+ +
Sbjct: 166 ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV---------LMKTVCGTPGY 216
Query: 311 MAPEIVNA-FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
APEI+ GPE D+WS+G++ YILLCG+ PFY G+
Sbjct: 217 CAPEILRGCAYGPE-------VDMWSVGIITYILLCGFEPFYDERGD------------- 256
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA 429
+ +F I Y F W +S AKDL+R+L+V D +KRL+ L+HPW++
Sbjct: 257 -QFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAAN 315
Query: 430 HRPLVTPQ-VIRRNQSARELSSFAESAMSANRV 461
+ T Q ++ + R+L + ++ ++++R+
Sbjct: 316 FVHMDTAQKKLQEFNARRKLKAAVKAVVASSRL 348
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/238 (28%), Positives = 100/238 (42%), Gaps = 61/238 (25%)
Query: 44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ 103
D + ++ E LG+GA + V C T+ YA+K++ K R E+
Sbjct: 50 ALSDFFEVESE-LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRT--EIGVLLRLS 106
Query: 104 GHPNIIQLLE----------------------------YYEDDENHERHKRI-------- 127
HPNII+L E YY + + + K+I
Sbjct: 107 -HPNIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLH 165
Query: 128 ----AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
HRDLKPEN+L P +P+K+ DF L ++ L+ T G+ +
Sbjct: 166 ENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV---------LMKTVCGTPGY 216
Query: 184 MAPEIVNA-FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 240
APEI+ GPE D+WS+G++ YILLCG+ PFY G+ ++R C
Sbjct: 217 CAPEILRGCAYGPE-------VDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCE 267
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 98/175 (56%), Gaps = 29/175 (16%)
Query: 252 QGIAHRDLKPENILCVHPDQLSP--VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 309
QG+ HRDLKP NIL V + +P +++CDF ++ LL+TP +A
Sbjct: 140 QGVVHRDLKPSNILYVD-ESGNPECLRICDFGFAKQLRAENG--------LLMTPCYTAN 190
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
F+APE++ + GYD+ CD+WSLG+++Y +L GY PF N D
Sbjct: 191 FVAPEVL------KRQGYDEGCDIWSLGILLYTMLAGYTPF-ANGPSD----------TP 233
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
+EIL I G + G W+T+S+ AKDL+ ++L D +RL+A VL+HPW++
Sbjct: 234 EEILTR-IGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQVLQHPWVT 287
Score = 100 bits (248), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 106/222 (47%), Gaps = 62/222 (27%)
Query: 44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ 103
F D Y +K E +G G+Y+ + CV+ T +EYAVK+IDK S+ +E+E
Sbjct: 24 VFSDGYVVK-ETIGVGSYSECKRCVHKATNMEYAVKVIDK----SKRDPSEEIEILLRYG 78
Query: 104 GHPNIIQLLEYYEDDEN-----------------------HERH---------------- 124
HPNII L + Y+D ++ ER
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLH 138
Query: 125 -KRIAHRDLKPENILCVHPDQLSP--VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
+ + HRDLKP NIL V + +P +++CDF ++ LL+TP +A
Sbjct: 139 SQGVVHRDLKPSNILYVD-ESGNPECLRICDFGFAKQLRAENG--------LLMTPCYTA 189
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
F+APE++ + GYD+ CD+WSLG+++Y +L GY PF
Sbjct: 190 NFVAPEVL------KRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 92/171 (53%), Gaps = 31/171 (18%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+AHRDLKPEN L + SP+KL DF L + K ++ T VG+ +++
Sbjct: 126 NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK---------PGKMMRTKVGTPYYVS 176
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
P+++ GPE CD WS GV++Y+LLCGYPPF + E+
Sbjct: 177 PQVLEGLYGPE-------CDEWSAGVMMYVLLCGYPPF--------------SAPTDXEV 215
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
+ I++G + FPE +W +S +A+ LIRRLL K ++R+++ L+H W
Sbjct: 216 ML-KIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEWF 265
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 94/208 (45%), Gaps = 57/208 (27%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYY 115
+G+G++ V+ V T + A K I K R +E+E HPNII+L E +
Sbjct: 17 IGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLD-HPNIIRLYETF 75
Query: 116 EDD-------------ENHER--HKRI-------------------------AHRDLKPE 135
ED+ E ER HKR+ AHRDLKPE
Sbjct: 76 EDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPE 135
Query: 136 NILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGP 195
N L + SP+KL DF L + K ++ T VG+ +++P+++ GP
Sbjct: 136 NFLFLTDSPDSPLKLIDFGLAARFK---------PGKMMRTKVGTPYYVSPQVLEGLYGP 186
Query: 196 EASGYDKRCDLWSLGVVVYILLCGYPPF 223
E CD WS GV++Y+LLCGYPPF
Sbjct: 187 E-------CDEWSAGVMMYVLLCGYPPF 207
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 119/259 (45%), Gaps = 52/259 (20%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ R D VV+ + L + + E ++IL H+ + I
Sbjct: 84 YENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT--KKI 136
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +KL DF L I+ + TP EF+AP
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP---------EFVAP 187
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 188 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 226
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
+I YDF E +S S+ AKD IR+LLVK+ RKRL+ L+HPWI+ P
Sbjct: 227 -LANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT-------P 278
Query: 433 LVTPQVIRRNQSARELSSF 451
+ Q + R +S L +F
Sbjct: 279 VDNQQAMVRRESVVNLENF 297
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 99/234 (42%), Gaps = 66/234 (28%)
Query: 46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETF 99
+D Y + GE LG G +A V+ C T LEYA K I K G SR + +EV
Sbjct: 11 EDFYDI-GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 100 HHCQGHPNIIQLLEYYE----------------------------------------DDE 119
H N+I L + YE D
Sbjct: 70 RQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGV 128
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
N+ K+IAH DLKPENI+ + + P +KL DF L I+ + TP
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP------ 182
Query: 179 GSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 183 ---EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 102/215 (47%), Gaps = 33/215 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKPEN+L D+ S + + DF L + + P +L T G+ ++A
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGL-------SKMEDP--GSVLSTACGTPGYVA 186
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
PE++ Y K D WS+GV+ YILLCGYPPFY
Sbjct: 187 PEVLAQ------KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK--------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
LF I + Y+F W ISD AKD IR L+ KD KR + L+HPWI+ +
Sbjct: 226 LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKN 285
Query: 433 L---VTPQVIRRNQSARELSSFAESAMSANRVILQ 464
+ V+ Q+ + ++ +F +A+ + LQ
Sbjct: 286 IHQSVSEQIKKNFAKSKWKQAFNATAVVRHMRKLQ 320
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 95/222 (42%), Gaps = 60/222 (27%)
Query: 45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHC 102
+D+Y + ++LG GA++ V + T+ A+K I K L G S + E+ H
Sbjct: 16 IRDIYDFR-DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGS-MENEIAVLHKI 73
Query: 103 QGHPNIIQLLEYYE----------------------------------------DDENHE 122
+ HPNI+ L + YE D +
Sbjct: 74 K-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
I HRDLKPEN+L D+ S + + DF L + + P +L T G+
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL-------SKMEDP--GSVLSTACGTPG 183
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
++APE++ Y K D WS+GV+ YILLCGYPPFY
Sbjct: 184 YVAPEVLAQ------KPYSKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 102/215 (47%), Gaps = 33/215 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKPEN+L D+ S + + DF L + + P +L T G+ ++A
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGL-------SKMEDP--GSVLSTACGTPGYVA 186
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
PE++ Y K D WS+GV+ YILLCGYPPFY
Sbjct: 187 PEVLAQ------KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK--------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
LF I + Y+F W ISD AKD IR L+ KD KR + L+HPWI+ +
Sbjct: 226 LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKN 285
Query: 433 L---VTPQVIRRNQSARELSSFAESAMSANRVILQ 464
+ V+ Q+ + ++ +F +A+ + LQ
Sbjct: 286 IHQSVSEQIKKNFAKSKWKQAFNATAVVRHMRKLQ 320
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 95/222 (42%), Gaps = 60/222 (27%)
Query: 45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHC 102
+D+Y + ++LG GA++ V + T+ A+K I K L G S + E+ H
Sbjct: 16 IRDIYDFR-DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS-MENEIAVLHKI 73
Query: 103 QGHPNIIQLLEYYE----------------------------------------DDENHE 122
+ HPNI+ L + YE D +
Sbjct: 74 K-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
I HRDLKPEN+L D+ S + + DF L + + P +L T G+
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL-------SKMEDP--GSVLSTACGTPG 183
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
++APE++ Y K D WS+GV+ YILLCGYPPFY
Sbjct: 184 YVAPEVLAQ------KPYSKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 113 bits (282), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 119/259 (45%), Gaps = 52/259 (20%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ R D VV+ + L + + E ++IL H+ + I
Sbjct: 84 YENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT--KKI 136
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +KL DF L I+ + TP EF+AP
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP---------EFVAP 187
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 188 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 226
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
+I YDF E +S S+ AKD IR+LLVK+ RKRL+ L+HPWI+ P
Sbjct: 227 -LANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT-------P 278
Query: 433 LVTPQVIRRNQSARELSSF 451
+ Q + R +S L +F
Sbjct: 279 VDNQQAMVRRESVVNLENF 297
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 99/234 (42%), Gaps = 66/234 (28%)
Query: 46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETF 99
+D Y + GE LG G +A V+ C T LEYA K I K G SR + +EV
Sbjct: 11 EDFYDI-GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 100 HHCQGHPNIIQLLEYYE----------------------------------------DDE 119
H N+I L + YE D
Sbjct: 70 RQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGV 128
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
N+ K+IAH DLKPENI+ + + P +KL DF L I+ + TP
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP------ 182
Query: 179 GSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 183 ---EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 116/253 (45%), Gaps = 52/253 (20%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ + D V++ + L + E E ++IL HS+Q I
Sbjct: 83 YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +K+ DF L I F + TP F+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------AFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
++ +Y+F + +S S AKD IRRLLVKD +KR++ L+HPWI +P
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI-------KP 277
Query: 433 LVTPQVIRRNQSA 445
T Q + R SA
Sbjct: 278 KDTQQALSRKASA 290
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 99/233 (42%), Gaps = 65/233 (27%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETFH 100
D Y GE LG G +A V+ C T L+YA K I K G SR + +EV
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 101 HCQGHPNIIQLLEYYE----------------------------DDENHERHKRI----- 127
Q HPN+I L E YE ++E E K+I
Sbjct: 70 EIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 128 -------AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
AH DLKPENI+ + + P +K+ DF L I F + TP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP------- 181
Query: 180 SAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
F+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 182 --AFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 99/207 (47%), Gaps = 33/207 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKPEN+L D+ S + + DF L + + P +L T G+ ++A
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGL-------SKMEDP--GSVLSTACGTPGYVA 186
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
PE++ Y K D WS+GV+ YILLCGYPPFY
Sbjct: 187 PEVLAQ------KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK--------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
LF I + Y+F W ISD AKD IR L+ KD KR + L+HPWI+ +
Sbjct: 226 LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIAGDTALDKN 285
Query: 433 L---VTPQVIRRNQSARELSSFAESAM 456
+ V+ Q+ + ++ +F +A+
Sbjct: 286 IHQSVSEQIKKNFAKSKWKQAFNATAV 312
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 95/222 (42%), Gaps = 60/222 (27%)
Query: 45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHC 102
+D+Y + ++LG GA++ V + T+ A+K I K L G S + E+ H
Sbjct: 16 IRDIYDFR-DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS-MENEIAVLHKI 73
Query: 103 QGHPNIIQLLEYYE----------------------------------------DDENHE 122
+ HPNI+ L + YE D +
Sbjct: 74 K-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
I HRDLKPEN+L D+ S + + DF L + + P +L T G+
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL-------SKMEDP--GSVLSTACGTPG 183
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
++APE++ Y K D WS+GV+ YILLCGYPPFY
Sbjct: 184 YVAPEVLAQ------KPYSKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 119/259 (45%), Gaps = 52/259 (20%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ R D VV+ + L + + E ++IL H+ + I
Sbjct: 84 YENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT--KKI 136
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +KL DF L I+ + TP EF+AP
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP---------EFVAP 187
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 188 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 226
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRP 432
+I YDF E +S S+ AKD IR+LLVK+ RKRL+ L+HPWI+ P
Sbjct: 227 -LANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT-------P 278
Query: 433 LVTPQVIRRNQSARELSSF 451
+ Q + R +S L +F
Sbjct: 279 VDNQQAMVRRESVVNLENF 297
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 99/234 (42%), Gaps = 66/234 (28%)
Query: 46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETF 99
+D Y + GE LG G +A V+ C T LEYA K I K G SR + +EV
Sbjct: 11 EDFYDI-GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 100 HHCQGHPNIIQLLEYYE----------------------------------------DDE 119
H N+I L + YE D
Sbjct: 70 RQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGV 128
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
N+ K+IAH DLKPENI+ + + P +KL DF L I+ + TP
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP------ 182
Query: 179 GSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 183 ---EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 123/261 (47%), Gaps = 41/261 (15%)
Query: 208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSI----QQGIAHRDLKPEN 263
S +V+ L+ G F + + + H Q+IL SI GI HR+LKPEN
Sbjct: 101 SFHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQIL-ESIAYCHSNGIVHRNLKPEN 158
Query: 264 ILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPE 323
+L + + VKL DF L + + + H TP +++PE++ +
Sbjct: 159 LLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP---------GYLSPEVL------K 203
Query: 324 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYD 383
Y K D+W+ GV++YILL GYPPF+ ED Q L+ I+ G YD
Sbjct: 204 KDPYSKPVDIWACGVILYILLVGYPPFWD---ED------------QHRLYAQIKAGAYD 248
Query: 384 FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI----STAGTAHRPLVTPQVI 439
+P EW T++ EAK LI +L + +KR++A LK PWI A HR T +
Sbjct: 249 YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQ-DTVDCL 307
Query: 440 RRNQSARELSSFAESAMSANR 460
++ + R+L + M A R
Sbjct: 308 KKFNARRKLKGAILTTMIATR 328
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 102/226 (45%), Gaps = 59/226 (26%)
Query: 41 VTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEVET 98
++ F D Y +K E LGKGA++ V+ CV+ T LE+A KII+ KL ++ +E
Sbjct: 23 ASTKFSDNYDVKEE-LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARI 81
Query: 99 FHHCQGHPNIIQLL-------------------EYYEDDENHERHKR------------- 126
Q HPNI++L E +ED E +
Sbjct: 82 CRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILES 140
Query: 127 --------IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
I HR+LKPEN+L + + VKL DF L + + + H TP
Sbjct: 141 IAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP------ 194
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
+++PE++ + Y K D+W+ GV++YILL GYPPF+
Sbjct: 195 ---GYLSPEVL------KKDPYSKPVDIWACGVILYILLVGYPPFW 231
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 95/195 (48%), Gaps = 34/195 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ GI HRDLKPEN+L D+ S + + DF L S ++ V S T G+ +
Sbjct: 138 RMGIVHRDLKPENLLYYSQDEESKIMISDFGL-SKMEGKGDVMS--------TACGTPGY 188
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE++ Y K D WS+GV+ YILLCGYPPFY
Sbjct: 189 VAPEVL------AQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDSK------------- 229
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
LF I + Y+F W ISD AKD IR L+ KD KR + +HPWI+ +
Sbjct: 230 --LFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIAGDTALN 287
Query: 431 RPL---VTPQVIRRN 442
+ + V+ Q IR+N
Sbjct: 288 KNIHESVSAQ-IRKN 301
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 54/98 (55%), Gaps = 15/98 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKPEN+L D+ S + + DF L S ++ V S T G+ ++AP
Sbjct: 141 IVHRDLKPENLLYYSQDEESKIMISDFGL-SKMEGKGDVMS--------TACGTPGYVAP 191
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
E++ Y K D WS+GV+ YILLCGYPPFY
Sbjct: 192 EVL------AQKPYSKAVDCWSIGVIAYILLCGYPPFY 223
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 112 bits (280), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 110/238 (46%), Gaps = 45/238 (18%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ + D V++ + L + E E ++IL HS+Q I
Sbjct: 83 YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +K+ DF L I F + TP EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
++ +Y+F + +S S AKD IRRLLVKD +KR++ L+HPWI T
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 100/233 (42%), Gaps = 65/233 (27%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETFH 100
D Y GE LG G +A V+ C T L+YA K I K G SR + +EV
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 101 HCQGHPNIIQLLEYYE----------------------------DDENHERHKRI----- 127
Q HPN+I L E YE ++E E K+I
Sbjct: 70 EIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 128 -------AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
AH DLKPENI+ + + P +K+ DF L I F + TP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP------- 181
Query: 180 SAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 182 --EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 85/172 (49%), Gaps = 30/172 (17%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKPEN+L D+ S + + DF L + + P +L T G+ ++A
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGL-------SKMEDP--GSVLSTACGTPGYVA 186
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
PE++ Y K D WS+GV+ YILLCGYPPFY
Sbjct: 187 PEVLAQ------KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAK--------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
LF I + Y+F W ISD AKD IR L+ KD KR + L+HPWI+
Sbjct: 226 LFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 95/222 (42%), Gaps = 60/222 (27%)
Query: 45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHC 102
+D+Y + ++LG GA++ V + T+ A+K I K L G S + E+ H
Sbjct: 16 IRDIYDFR-DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGS-MENEIAVLHKI 73
Query: 103 QGHPNIIQLLEYYE----------------------------------------DDENHE 122
+ HPNI+ L + YE D +
Sbjct: 74 K-HPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYL 132
Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
I HRDLKPEN+L D+ S + + DF L + + P +L T G+
Sbjct: 133 HDLGIVHRDLKPENLLYYSLDEDSKIMISDFGL-------SKMEDP--GSVLSTACGTPG 183
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
++APE++ Y K D WS+GV+ YILLCGYPPFY
Sbjct: 184 YVAPEVLAQ------KPYSKAVDCWSIGVIAYILLCGYPPFY 219
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 110/238 (46%), Gaps = 45/238 (18%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ + D V++ + L + E E ++IL HS+Q I
Sbjct: 83 YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +K+ DF L I F + TP EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
++ +Y+F + +S S AKD IRRLLVKD +KR++ L+HPWI T
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 100/233 (42%), Gaps = 65/233 (27%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETFH 100
D Y GE LG G +A V+ C T L+YA K I K G SR + +EV
Sbjct: 10 DDYYDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 101 HCQGHPNIIQLLEYYE----------------------------DDENHERHKRI----- 127
Q HPN+I L E YE ++E E K+I
Sbjct: 70 EIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 128 -------AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
AH DLKPENI+ + + P +K+ DF L I F + TP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP------- 181
Query: 180 SAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 182 --EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 110/238 (46%), Gaps = 45/238 (18%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ + D V++ + L + E E ++IL HS+Q I
Sbjct: 83 YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +K+ DF L I F + TP EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
++ +Y+F + +S S AKD IRRLLVKD +KR++ L+HPWI T
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 100/233 (42%), Gaps = 65/233 (27%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETFH 100
D Y GE LG G +A V+ C T L+YA K I K G SR + +EV
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 101 HCQGHPNIIQLLEYYE----------------------------DDENHERHKRI----- 127
Q HPN+I L E YE ++E E K+I
Sbjct: 70 EIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 128 -------AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
AH DLKPENI+ + + P +K+ DF L I F + TP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP------- 181
Query: 180 SAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 182 --EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 110/238 (46%), Gaps = 45/238 (18%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ + D V++ + L + E E ++IL HS+Q I
Sbjct: 83 YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +K+ DF L I F + TP EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
++ +Y+F + +S S AKD IRRLLVKD +KR++ L+HPWI T
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 100/233 (42%), Gaps = 65/233 (27%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETFH 100
D Y GE LG G +A V+ C T L+YA K I K G SR + +EV
Sbjct: 10 DDYYDTGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 101 HCQGHPNIIQLLEYYE----------------------------DDENHERHKRI----- 127
Q HPN+I L E YE ++E E K+I
Sbjct: 70 EIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 128 -------AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
AH DLKPENI+ + + P +K+ DF L I F + TP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP------- 181
Query: 180 SAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 182 --EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 112 bits (279), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 110/238 (46%), Gaps = 45/238 (18%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ + D V++ + L + E E ++IL HS+Q I
Sbjct: 82 YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 134
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +K+ DF L I F + TP EF+AP
Sbjct: 135 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 185
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 186 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 224
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
++ +Y+F + +S S AKD IRRLLVKD +KR++ L+HPWI T
Sbjct: 225 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 281
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 100/233 (42%), Gaps = 65/233 (27%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETFH 100
D Y GE LG G +A V+ C T L+YA K I K G SR + +EV
Sbjct: 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 101 HCQGHPNIIQLLEYYE----------------------------DDENHERHKRI----- 127
Q HPN+I L E YE ++E E K+I
Sbjct: 69 EIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 127
Query: 128 -------AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
AH DLKPENI+ + + P +K+ DF L I F + TP
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP------- 180
Query: 180 SAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 181 --EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 224
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 111 bits (278), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 110/238 (46%), Gaps = 45/238 (18%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ + D V++ + L + E E ++IL HS+Q I
Sbjct: 82 YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 134
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +K+ DF L I F + TP EF+AP
Sbjct: 135 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 185
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 186 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 224
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
++ +Y+F + +S S AKD IRRLLVKD +KR++ L+HPWI T
Sbjct: 225 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 281
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 100/233 (42%), Gaps = 65/233 (27%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETFH 100
D Y GE LG G +A V+ C T L+YA K I K G SR + +EV
Sbjct: 9 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 68
Query: 101 HCQGHPNIIQLLEYYE----------------------------DDENHERHKRI----- 127
Q HPN+I L E YE ++E E K+I
Sbjct: 69 EIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 127
Query: 128 -------AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
AH DLKPENI+ + + P +K+ DF L I F + TP
Sbjct: 128 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP------- 180
Query: 180 SAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 181 --EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 224
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 109/232 (46%), Gaps = 45/232 (19%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ + D V++ + L + E E ++IL HS+Q I
Sbjct: 83 YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +K+ DF L I F + TP EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
++ +Y+F + +S S AKD IRRLLVKD +KR++ L+HPWI
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 100/233 (42%), Gaps = 65/233 (27%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETFH 100
D Y GE LG G +A V+ C T L+YA K I K G SR + +EV
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 101 HCQGHPNIIQLLEYYE----------------------------DDENHERHKRI----- 127
Q HPN+I L E YE ++E E K+I
Sbjct: 70 EIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 128 -------AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
AH DLKPENI+ + + P +K+ DF L I F + TP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP------- 181
Query: 180 SAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 182 --EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 109/232 (46%), Gaps = 45/232 (19%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ + D V++ + L + E E ++IL HS+Q I
Sbjct: 83 YENKTD-----VILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +K+ DF L I F + TP EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
++ +Y+F + +S S AKD IRRLLVKD +KR++ L+HPWI
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIK 276
Score = 92.8 bits (229), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 100/233 (42%), Gaps = 65/233 (27%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETFH 100
D Y GE LG G +A V+ C T L+YA K I K G SR + +EV
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 101 HCQGHPNIIQLLEYYE----------------------------DDENHERHKRI----- 127
Q HPN+I L E YE ++E E K+I
Sbjct: 70 EIQ-HPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 128 -------AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
AH DLKPENI+ + + P +K+ DF L I F + TP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP------- 181
Query: 180 SAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 182 --EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 109/238 (45%), Gaps = 45/238 (18%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ + D+ +G L + E E ++IL HS+Q I
Sbjct: 83 YENKTDVILIGE-----LVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQ--I 135
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +K+ DF L I F + TP EF+AP
Sbjct: 136 AHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP---------EFVAP 186
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 187 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 225
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
++ +Y+F + +S S AKD IRRLLVKD +KR++ L+HPWI T
Sbjct: 226 -LANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
Score = 93.2 bits (230), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 100/233 (42%), Gaps = 65/233 (27%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETFH 100
D Y GE LG G +A V+ C T L+YA K I K G SR + +EV
Sbjct: 10 DDYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILK 69
Query: 101 HCQGHPNIIQLLEYYE----------------------------DDENHERHKRI----- 127
Q HPN+I L E YE ++E E K+I
Sbjct: 70 EIQ-HPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVY 128
Query: 128 -------AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
AH DLKPENI+ + + P +K+ DF L I F + TP
Sbjct: 129 YLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP------- 181
Query: 180 SAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 182 --EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 225
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 99/194 (51%), Gaps = 23/194 (11%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
G+ HRDLKPEN+L + +K+ DF + + PL TP + + A
Sbjct: 126 GVVHRDLKPENLLFTDENDNLEIKIIDFGFA---RLKPPDNQPLKTPCF-----TLHYAA 177
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
PE++N +GYD+ CDLWSLGV++Y +L G PF + R TC + EI
Sbjct: 178 PELLNQ------NGYDESCDLWSLGVILYTMLSGQVPFQSH-------DRSLTCTSAVEI 224
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT-AHR 431
+ I++G + F W +S EAKDLI+ LL D KRL + + + W+ +
Sbjct: 225 M-KKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSN 283
Query: 432 PLVTPQVIRRNQSA 445
PL+TP ++ + +A
Sbjct: 284 PLMTPDILGSSGAA 297
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 136/316 (43%), Gaps = 90/316 (28%)
Query: 51 LKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQ 110
LK + LG+G+++ + CV+ + +AVKII K + KE+ C+GHPNI++
Sbjct: 14 LKDKPLGEGSFSICRKCVHKKSNQAFAVKIISK---RMEANTQKEITALKLCEGHPNIVK 70
Query: 111 LLEYYEDD-------------ENHERHKR---------------------------IAHR 130
L E + D E ER K+ + HR
Sbjct: 71 LHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHR 130
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPEN+L + +K+ DF + + PL TP + + APE++N
Sbjct: 131 DLKPENLLFTDENDNLEIKIIDFGFA---RLKPPDNQPLKTPCF-----TLHYAAPELLN 182
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSI 250
+GYD+ CDLWSLGV++Y +L G PF + R TC + EI+
Sbjct: 183 Q------NGYDESCDLWSLGVILYTMLSGQVPFQSH-------DRSLTCTSAVEIMKKIK 229
Query: 251 Q-----QGIAHRDLKPE------NILCVHPDQLSPVKLCDFDLGSGIKFNTSVH------ 293
+ +G A +++ E +L V P++ + SG+++N +
Sbjct: 230 KGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKM--------SGLRYNEWLQDGSQLS 281
Query: 294 -SPLATPLLLTPVGSA 308
+PL TP +L G+A
Sbjct: 282 SNPLMTPDILGSSGAA 297
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 93/204 (45%), Gaps = 54/204 (26%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
HSI IAHRD+KPEN+L + +KL DF
Sbjct: 133 LHSI--NIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---------------------- 168
Query: 307 SAEFMAPEIVNAFMGPEASG--YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE 364
E +G YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 169 ----------------ETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG--------- 203
Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI- 423
A + I+ G Y+FP EWS +S+E K LIR LL + +R++ + HPWI
Sbjct: 204 --LAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIM 261
Query: 424 STAGTAHRPLVTPQVIRRNQSARE 447
+ PL T +V++ ++ E
Sbjct: 262 QSTKVPQTPLHTSRVLKEDKERWE 285
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 85/230 (36%), Gaps = 91/230 (39%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHP 106
D Y++ ++LG G V N T+ ++A+K++ P R EVE P
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARR-----EVELHWRASQCP 71
Query: 107 NIIQLLEYYE-----------------------------DDENHERHK------------ 125
+I+++++ YE D ER
Sbjct: 72 HIVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQ 131
Query: 126 -----RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
IAHRD+KPEN+L + +KL DF
Sbjct: 132 YLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK----------------------- 168
Query: 181 AEFMAPEIVNAFMGPEASG--YDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
E +G YDK CD+WSLGV++YILLCGYPPFY N G
Sbjct: 169 ---------------ETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG 203
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 109 bits (273), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 109/232 (46%), Gaps = 45/232 (19%)
Query: 200 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGI 254
Y+ R D VV+ + L + + E ++IL H+ + I
Sbjct: 84 YENRTD-----VVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHT--KKI 136
Query: 255 AHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
AH DLKPENI+ + + P +KL DF L I+ + TP EF+AP
Sbjct: 137 AHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP---------EFVAP 187
Query: 314 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
EIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 188 EIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET-------------- 226
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
+I YDF E +S S+ AKD IR+LLVK+ RKRL+ L+HPWI+
Sbjct: 227 -LANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/234 (32%), Positives = 99/234 (42%), Gaps = 66/234 (28%)
Query: 46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETF 99
+D Y + GE LG G +A V+ C T LEYA K I K G SR + +EV
Sbjct: 11 EDFYDI-GEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSIL 69
Query: 100 HHCQGHPNIIQLLEYYE----------------------------------------DDE 119
H N+I L + YE D
Sbjct: 70 RQVLHH-NVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGV 128
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
N+ K+IAH DLKPENI+ + + P +KL DF L I+ + TP
Sbjct: 129 NYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP------ 182
Query: 179 GSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G+ ++
Sbjct: 183 ---EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGDTKQET 226
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 109 bits (273), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 108/221 (48%), Gaps = 35/221 (15%)
Query: 244 EILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
E L + I HRD+KPEN+L + +PVKL DF G I+ S +
Sbjct: 141 EALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDF--GVAIQLGES------GLVAGG 192
Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 363
VG+ FMAPE+V + Y K D+W GV+++ILL G PFYG
Sbjct: 193 RVGTPHFMAPEVV------KREPYGKPVDVWGCGVILFILLSGCLPFYGT---------- 236
Query: 364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
+E LF I +G Y +WS IS+ AKDL+RR+L+ D +R++ L HPW+
Sbjct: 237 ------KERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWL 290
Query: 424 ST----AGTAHRPLVTPQVIRRNQSARELSSFAESAMSANR 460
A H P Q +R+ + R+L +A+S+++
Sbjct: 291 KERDRYAYKIHLPETVEQ-LRKFNARRKLKGAVLAAVSSHK 330
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 104/231 (45%), Gaps = 65/231 (28%)
Query: 45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIID-----KLPGHSRSRVFKEVETF 99
F+D+Y L E++GKGA++ V+ C+N T ++AVKI+D PG S + +E
Sbjct: 22 FEDVYEL-CEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80
Query: 100 HHCQGHPNIIQLLEYYEDD----------------------------------ENHERH- 124
H + HP+I++LLE Y D ++ R
Sbjct: 81 HMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI 139
Query: 125 ---------KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
I HRD+KPEN+L + +PVKL DF G I+ S +
Sbjct: 140 LEALRYCHDNNIIHRDVKPENVLLASKENSAPVKLGDF--GVAIQLGES------GLVAG 191
Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
VG+ FMAPE+V + Y K D+W GV+++ILL G PFYG
Sbjct: 192 GRVGTPHFMAPEVV------KREPYGKPVDVWGCGVILFILLSGCLPFYGT 236
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 99/195 (50%), Gaps = 35/195 (17%)
Query: 233 WQRGETCHACQEILFHSI----QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF 288
+ + H Q+IL SI GI HR+LKPEN+L + + VKL DF L +
Sbjct: 102 YSEADASHCIQQIL-ESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVND 160
Query: 289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
+ + H TP +++PE++ + Y K D+W+ GV++YILL GYP
Sbjct: 161 SEAWHGFAGTP---------GYLSPEVL------KKDPYSKPVDIWACGVILYILLVGYP 205
Query: 349 PFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDA 408
PF+ ED Q L+ I+ G YD+P EW T++ EAK LI +L +
Sbjct: 206 PFWD---ED------------QHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNP 250
Query: 409 RKRLSAASVLKHPWI 423
+KR++A LK PWI
Sbjct: 251 KKRITADQALKVPWI 265
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 102/225 (45%), Gaps = 59/225 (26%)
Query: 42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEVETF 99
++ F D Y +K E LGKGA++ V+ CV+ T LE+A KII+ KL ++ +E
Sbjct: 1 STKFSDNYDVKEE-LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 59
Query: 100 HHCQGHPNIIQLL-------------------EYYEDDENHERHKR-------------- 126
Q HPNI++L E +ED E +
Sbjct: 60 RKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 118
Query: 127 -------IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
I HR+LKPEN+L + + VKL DF L + + + H TP
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP------- 171
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
+++PE++ + Y K D+W+ GV++YILL GYPPF+
Sbjct: 172 --GYLSPEVL------KKDPYSKPVDIWACGVILYILLVGYPPFW 208
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 40/232 (17%)
Query: 208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSI----QQGIAHRDLKPEN 263
S +V+ L+ G F + + + H Q+IL SI GI HR+LKPEN
Sbjct: 78 SFHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQIL-ESIAYCHSNGIVHRNLKPEN 135
Query: 264 ILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPE 323
+L + + VKL DF L + + + H TP +++PE++ +
Sbjct: 136 LLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP---------GYLSPEVL------K 180
Query: 324 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYD 383
Y K D+W+ GV++YILL GYPPF+ ED Q L+ I+ G YD
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPPFWD---ED------------QHRLYAQIKAGAYD 225
Query: 384 FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI----STAGTAHR 431
+P EW T++ EAK LI +L + +KR++A LK PWI A HR
Sbjct: 226 YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHR 277
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 102/225 (45%), Gaps = 59/225 (26%)
Query: 42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEVETF 99
++ F D Y +K E LGKGA++ V+ CV+ T LE+A KII+ KL ++ +E
Sbjct: 1 STKFSDNYDVKEE-LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARIC 59
Query: 100 HHCQGHPNIIQLL-------------------EYYEDDENHERHKR-------------- 126
Q HPNI++L E +ED E +
Sbjct: 60 RKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESI 118
Query: 127 -------IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
I HR+LKPEN+L + + VKL DF L + + + H TP
Sbjct: 119 AYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP------- 171
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
+++PE++ + Y K D+W+ GV++YILL GYPPF+
Sbjct: 172 --GYLSPEVL------KKDPYSKPVDIWACGVILYILLVGYPPFW 208
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 109 bits (272), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 111/232 (47%), Gaps = 40/232 (17%)
Query: 208 SLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSI----QQGIAHRDLKPEN 263
S +V+ L+ G F + + + H Q+IL SI GI HR+LKPEN
Sbjct: 77 SFHYLVFDLVTGGELFEDIVAREF-YSEADASHCIQQIL-ESIAYCHSNGIVHRNLKPEN 134
Query: 264 ILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPE 323
+L + + VKL DF L + + + H TP +++PE++ +
Sbjct: 135 LLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP---------GYLSPEVL------K 179
Query: 324 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYD 383
Y K D+W+ GV++YILL GYPPF+ ED Q L+ I+ G YD
Sbjct: 180 KDPYSKPVDIWACGVILYILLVGYPPFWD---ED------------QHRLYAQIKAGAYD 224
Query: 384 FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI----STAGTAHR 431
+P EW T++ EAK LI +L + +KR++A LK PWI A HR
Sbjct: 225 YPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHR 276
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 100/222 (45%), Gaps = 59/222 (26%)
Query: 45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEVETFHHC 102
F D Y +K E LGKGA++ V+ CV+ T LE+A KII+ KL ++ +E
Sbjct: 3 FSDNYDVKEE-LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKL 61
Query: 103 QGHPNIIQLL-------------------EYYEDDENHERHKR----------------- 126
Q HPNI++L E +ED E +
Sbjct: 62 Q-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYC 120
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
I HR+LKPEN+L + + VKL DF L + + + H TP
Sbjct: 121 HSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP---------G 171
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
+++PE++ + Y K D+W+ GV++YILL GYPPF+
Sbjct: 172 YLSPEVL------KKDPYSKPVDIWACGVILYILLVGYPPFW 207
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 108 bits (271), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 105/221 (47%), Gaps = 40/221 (18%)
Query: 211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGIAHRDLKPENIL 265
VV+ + L + E E ++IL HS + IAH DLKPENI+
Sbjct: 83 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS--KRIAHFDLKPENIM 140
Query: 266 CVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF-MGPE 323
+ + +P +KL DF + I+ + TP EF+APEIVN +G E
Sbjct: 141 LLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP---------EFVAPEIVNYEPLGLE 191
Query: 324 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYD 383
A D+WS+GV+ YILL G PF G ++ +I +YD
Sbjct: 192 A-------DMWSIGVITYILLSGASPFLGETKQET---------------LTNISAVNYD 229
Query: 384 FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
F E +S S+ AKD IRRLLVKD ++R++ A L+H WI
Sbjct: 230 FDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWIK 270
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 102/237 (43%), Gaps = 66/237 (27%)
Query: 43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEV 96
S +D Y + GE LG G +A V+ C T EYA K I K G SR + +EV
Sbjct: 1 SMVEDHYEM-GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREV 59
Query: 97 ETFHHCQGHPNIIQLLEYYED--------------------------------------- 117
+ HPNII L + +E+
Sbjct: 60 NILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 118
Query: 118 DENHERH-KRIAHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLL 175
D H H KRIAH DLKPENI+ + + +P +KL DF + I+ + TP
Sbjct: 119 DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP--- 175
Query: 176 TPVGSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G ++
Sbjct: 176 ------EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGETKQET 219
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 37/205 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKPEN+L + + +++ DF L + + A+ + +G+A ++AP
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---------ASKKMKDKIGTAYYIAP 197
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E+++ YD++CD+WS GV++YILL G PPF G A + +
Sbjct: 198 EVLHG-------TYDEKCDVWSTGVILYILLSGCPPFNG---------------ANEYDI 235
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPL 433
+++G Y F +W +S+ AKDLIR++L R+SA L H WI T +
Sbjct: 236 LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISV 295
Query: 434 VTPQV------IRRNQSARELSSFA 452
P + IR+ Q ++L+ A
Sbjct: 296 DVPSLDNAILNIRQFQGTQKLAQAA 320
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 109/228 (47%), Gaps = 63/228 (27%)
Query: 42 TSCFQDLYRLKGE-ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVE 97
T+ F D Y KG+ +LGKG++ V C + +T E AVK+I K ++ + +EV+
Sbjct: 21 TAIFSDRY--KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 78
Query: 98 TFHHCQGHPNIIQLLEYYED-----------------DENHERHK--------------- 125
HPNI++L E++ED DE R +
Sbjct: 79 LLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 137
Query: 126 --------RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
+I HRDLKPEN+L + + +++ DF L + + A+ +
Sbjct: 138 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---------ASKKMKDK 188
Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
+G+A ++APE+++ YD++CD+WS GV++YILL G PPF G
Sbjct: 189 IGTAYYIAPEVLHG-------TYDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 108 bits (270), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 37/205 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKPEN+L + + +++ DF L + + A+ + +G+A ++AP
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---------ASKKMKDKIGTAYYIAP 220
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E+++ YD++CD+WS GV++YILL G PPF G A + +
Sbjct: 221 EVLHG-------TYDEKCDVWSTGVILYILLSGCPPFNG---------------ANEYDI 258
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPL 433
+++G Y F +W +S+ AKDLIR++L R+SA L H WI T +
Sbjct: 259 LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISV 318
Query: 434 VTPQV------IRRNQSARELSSFA 452
P + IR+ Q ++L+ A
Sbjct: 319 DVPSLDNAILNIRQFQGTQKLAQAA 343
Score = 98.6 bits (244), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 109/228 (47%), Gaps = 63/228 (27%)
Query: 42 TSCFQDLYRLKGE-ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVE 97
T+ F D Y KG+ +LGKG++ V C + +T E AVK+I K ++ + +EV+
Sbjct: 44 TAIFSDRY--KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 101
Query: 98 TFHHCQGHPNIIQLLEYYED-----------------DENHERHK--------------- 125
HPNI++L E++ED DE R +
Sbjct: 102 LLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 160
Query: 126 --------RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
+I HRDLKPEN+L + + +++ DF L + + A+ +
Sbjct: 161 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---------ASKKMKDK 211
Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
+G+A ++APE+++ YD++CD+WS GV++YILL G PPF G
Sbjct: 212 IGTAYYIAPEVLHG-------TYDEKCDVWSTGVILYILLSGCPPFNG 252
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 37/205 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKPEN+L + + +++ DF L + + A+ + +G+A ++AP
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---------ASKKMKDKIGTAYYIAP 221
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E+++ YD++CD+WS GV++YILL G PPF G A + +
Sbjct: 222 EVLHG-------TYDEKCDVWSTGVILYILLSGCPPFNG---------------ANEYDI 259
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPL 433
+++G Y F +W +S+ AKDLIR++L R+SA L H WI T +
Sbjct: 260 LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISV 319
Query: 434 VTPQV------IRRNQSARELSSFA 452
P + IR+ Q ++L+ A
Sbjct: 320 DVPSLDNAILNIRQFQGTQKLAQAA 344
Score = 98.6 bits (244), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 108/227 (47%), Gaps = 61/227 (26%)
Query: 42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVET 98
T+ F D Y+ + +LGKG++ V C + +T E AVK+I K ++ + +EV+
Sbjct: 45 TAIFSDRYKGQ-RVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 103
Query: 99 FHHCQGHPNIIQLLEYYED-----------------DENHERHK---------------- 125
HPNI++L E++ED DE R +
Sbjct: 104 LKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSG 162
Query: 126 -------RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
+I HRDLKPEN+L + + +++ DF L + + A+ + +
Sbjct: 163 ITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---------ASKKMKDKI 213
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
G+A ++APE+++ YD++CD+WS GV++YILL G PPF G
Sbjct: 214 GTAYYIAPEVLHG-------TYDEKCDVWSTGVILYILLSGCPPFNG 253
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 108 bits (270), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 104/221 (47%), Gaps = 40/221 (18%)
Query: 211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGIAHRDLKPENIL 265
VV+ + L + E E ++IL HS + IAH DLKPENI+
Sbjct: 90 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS--KRIAHFDLKPENIM 147
Query: 266 CVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF-MGPE 323
+ + +P +KL DF + I+ + TP EF+APEIVN +G E
Sbjct: 148 LLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP---------EFVAPEIVNYEPLGLE 198
Query: 324 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYD 383
A D+WS+GV+ YILL G PF G ++ +I +YD
Sbjct: 199 A-------DMWSIGVITYILLSGASPFLGETKQET---------------LTNISAVNYD 236
Query: 384 FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
F E +S S+ AKD IRRLLVKD ++R+ A L+H WI
Sbjct: 237 FDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 277
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 101/234 (43%), Gaps = 66/234 (28%)
Query: 46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEVETF 99
+D Y + GE LG G +A V+ C T EYA K I K G SR + +EV
Sbjct: 11 EDHYEM-GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNIL 69
Query: 100 HHCQGHPNIIQLLEYYED---------------------------------------DEN 120
+ HPNII L + +E+ D
Sbjct: 70 REIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGV 128
Query: 121 HERH-KRIAHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
H H KRIAH DLKPENI+ + + +P +KL DF + I+ + TP
Sbjct: 129 HYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP------ 182
Query: 179 GSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G ++
Sbjct: 183 ---EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGETKQET 226
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 108 bits (269), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/221 (33%), Positives = 104/221 (47%), Gaps = 40/221 (18%)
Query: 211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL-----FHSIQQGIAHRDLKPENIL 265
VV+ + L + E E ++IL HS + IAH DLKPENI+
Sbjct: 104 VVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHS--KRIAHFDLKPENIM 161
Query: 266 CVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF-MGPE 323
+ + +P +KL DF + I+ + TP EF+APEIVN +G E
Sbjct: 162 LLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP---------EFVAPEIVNYEPLGLE 212
Query: 324 ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYD 383
A D+WS+GV+ YILL G PF G ++ +I +YD
Sbjct: 213 A-------DMWSIGVITYILLSGASPFLGETKQET---------------LTNISAVNYD 250
Query: 384 FPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
F E +S S+ AKD IRRLLVKD ++R+ A L+H WI
Sbjct: 251 FDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWIK 291
Score = 91.7 bits (226), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 102/237 (43%), Gaps = 66/237 (27%)
Query: 43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP------GHSRSRVFKEV 96
S +D Y + GE LG G +A V+ C T EYA K I K G SR + +EV
Sbjct: 22 SMVEDHYEM-GEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREV 80
Query: 97 ETFHHCQGHPNIIQLLEYYED--------------------------------------- 117
+ HPNII L + +E+
Sbjct: 81 NILREIR-HPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQIL 139
Query: 118 DENHERH-KRIAHRDLKPENILCVHPDQLSP-VKLCDFDLGSGIKFNTSVHSPLATPLLL 175
D H H KRIAH DLKPENI+ + + +P +KL DF + I+ + TP
Sbjct: 140 DGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP--- 196
Query: 176 TPVGSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
EF+APEIVN +G EA D+WS+GV+ YILL G PF G ++
Sbjct: 197 ------EFVAPEIVNYEPLGLEA-------DMWSIGVITYILLSGASPFLGETKQET 240
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 90/172 (52%), Gaps = 31/172 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKPEN+L + + +++ DF L + + A+ + +G+A ++AP
Sbjct: 153 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---------ASKKMKDKIGTAYYIAP 203
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E+++ YD++CD+WS GV++YILL G PPF G A + +
Sbjct: 204 EVLHG-------TYDEKCDVWSTGVILYILLSGCPPFNG---------------ANEYDI 241
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
+++G Y F +W +S+ AKDLIR++L R+SA L H WI T
Sbjct: 242 LKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 293
Score = 96.7 bits (239), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 109/228 (47%), Gaps = 63/228 (27%)
Query: 42 TSCFQDLYRLKGE-ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVE 97
T+ F D R KG+ +LGKG++ V C + +T E AVK+I K ++ + +EV+
Sbjct: 27 TAIFSD--RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 84
Query: 98 TFHHCQGHPNIIQLLEYYED-----------------DENHERHK--------------- 125
HPNI++L E++ED DE R +
Sbjct: 85 LLKQLD-HPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 143
Query: 126 --------RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
+I HRDLKPEN+L + + +++ DF L + + A+ +
Sbjct: 144 GITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---------ASKKMKDK 194
Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
+G+A ++APE+++ YD++CD+WS GV++YILL G PPF G
Sbjct: 195 IGTAYYIAPEVLHG-------TYDEKCDVWSTGVILYILLSGCPPFNG 235
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 100/205 (48%), Gaps = 37/205 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKPEN+L + + +++ DF L + + A+ +G+A ++AP
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---------ASKKXKDKIGTAYYIAP 197
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E+++ YD++CD+WS GV++YILL G PPF G A + +
Sbjct: 198 EVLHG-------TYDEKCDVWSTGVILYILLSGCPPFNG---------------ANEYDI 235
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPL 433
+++G Y F +W +S+ AKDLIR+ L R+SA L H WI T +
Sbjct: 236 LKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTYTKEQISV 295
Query: 434 VTPQV------IRRNQSARELSSFA 452
P + IR+ Q ++L+ A
Sbjct: 296 DVPSLDNAILNIRQFQGTQKLAQAA 320
Score = 95.1 bits (235), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 107/228 (46%), Gaps = 63/228 (27%)
Query: 42 TSCFQDLYRLKGE-ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVE 97
T+ F D Y KG+ +LGKG++ V C + +T E AVK+I K ++ + +EV+
Sbjct: 21 TAIFSDRY--KGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQ 78
Query: 98 TFHHCQGHPNIIQLLEYYED-----------------DENHERHK--------------- 125
HPNI +L E++ED DE R +
Sbjct: 79 LLKQLD-HPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS 137
Query: 126 --------RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
+I HRDLKPEN+L + + +++ DF L + + A+
Sbjct: 138 GITYXHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFE---------ASKKXKDK 188
Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
+G+A ++APE+++ YD++CD+WS GV++YILL G PPF G
Sbjct: 189 IGTAYYIAPEVLHG-------TYDEKCDVWSTGVILYILLSGCPPFNG 229
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 30/175 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSA 308
+ GI HRDLKPEN+L ++ +K+ DF HS + T L+ T G+
Sbjct: 132 ENGIIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTP 180
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
++APE++ + +GY++ D WSLGV+++I L GYPPF + H
Sbjct: 181 TYLAPEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF--------------SEHR 223
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
Q L I G Y+F W+ +S++A DL+++LLV D + R + L+HPW+
Sbjct: 224 TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSAEFM 184
I HRDLKPEN+L ++ +K+ DF HS + T L+ T G+ ++
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTPTYL 183
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ + +GY++ D WSLGV+++I L GYPPF
Sbjct: 184 APEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 30/175 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSA 308
+ GI HRDLKPEN+L ++ +K+ DF HS + T L+ T G+
Sbjct: 271 ENGIIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTP 319
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
++APE++ + +GY++ D WSLGV+++I L GYPPF + H
Sbjct: 320 TYLAPEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF--------------SEHR 362
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
Q L I G Y+F W+ +S++A DL+++LLV D + R + L+HPW+
Sbjct: 363 TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 417
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSAEFM 184
I HRDLKPEN+L ++ +K+ DF HS + T L+ T G+ ++
Sbjct: 274 IIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTPTYL 322
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ + +GY++ D WSLGV+++I L GYPPF
Sbjct: 323 APEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 30/175 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSA 308
+ GI HRDLKPEN+L ++ +K+ DF HS + T L+ T G+
Sbjct: 132 ENGIIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTP 180
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
++APE++ + +GY++ D WSLGV+++I L GYPPF + H
Sbjct: 181 TYLAPEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF--------------SEHR 223
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
Q L I G Y+F W+ +S++A DL+++LLV D + R + L+HPW+
Sbjct: 224 TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSAEFM 184
I HRDLKPEN+L ++ +K+ DF HS + T L+ T G+ ++
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTPTYL 183
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ + +GY++ D WSLGV+++I L GYPPF
Sbjct: 184 APEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 105 bits (263), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 30/175 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSA 308
+ GI HRDLKPEN+L ++ +K+ DF HS + T L+ T G+
Sbjct: 132 ENGIIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTP 180
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
++APE++ + +GY++ D WSLGV+++I L GYPPF + H
Sbjct: 181 TYLAPEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF--------------SEHR 223
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
Q L I G Y+F W+ +S++A DL+++LLV D + R + L+HPW+
Sbjct: 224 TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 278
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSAEFM 184
I HRDLKPEN+L ++ +K+ DF HS + T L+ T G+ ++
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTPTYL 183
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ + +GY++ D WSLGV+++I L GYPPF
Sbjct: 184 APEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF 219
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 30/175 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSA 308
+ GI HRDLKPEN+L ++ +K+ DF HS + T L+ T G+
Sbjct: 131 ENGIIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTP 179
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
++APE++ + +GY++ D WSLGV+++I L GYPPF + H
Sbjct: 180 TYLAPEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF--------------SEHR 222
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
Q L I G Y+F W+ +S++A DL+++LLV D + R + L+HPW+
Sbjct: 223 TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 277
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSAEFM 184
I HRDLKPEN+L ++ +K+ DF HS + T L+ T G+ ++
Sbjct: 134 IIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTPTYL 182
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ + +GY++ D WSLGV+++I L GYPPF
Sbjct: 183 APEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF 218
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 30/175 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSA 308
+ GI HRDLKPEN+L ++ +K+ DF HS + T L+ T G+
Sbjct: 138 ENGIIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTP 186
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
++APE++ + +GY++ D WSLGV+++I L GYPPF + H
Sbjct: 187 TYLAPEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF--------------SEHR 229
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
Q L I G Y+F W+ +S++A DL+++LLV D + R + L+HPW+
Sbjct: 230 TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 284
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSAEFM 184
I HRDLKPEN+L ++ +K+ DF HS + T L+ T G+ ++
Sbjct: 141 IIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTPTYL 189
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ + +GY++ D WSLGV+++I L GYPPF
Sbjct: 190 APEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 105 bits (262), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 92/175 (52%), Gaps = 30/175 (17%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSA 308
+ GI HRDLKPEN+L ++ +K+ DF HS + T L+ T G+
Sbjct: 257 ENGIIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTP 305
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
++APE++ + +GY++ D WSLGV+++I L GYPPF + H
Sbjct: 306 TYLAPEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF--------------SEHR 348
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
Q L I G Y+F W+ +S++A DL+++LLV D + R + L+HPW+
Sbjct: 349 TQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWL 403
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 16/99 (16%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL--ATPLLLTPVGSAEFM 184
I HRDLKPEN+L ++ +K+ DF HS + T L+ T G+ ++
Sbjct: 260 IIHRDLKPENVLLSSQEEDCLIKITDFG-----------HSKILGETSLMRTLCGTPTYL 308
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ + +GY++ D WSLGV+++I L GYPPF
Sbjct: 309 APEVL---VSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 78/171 (45%), Gaps = 27/171 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
I HRDLKPENIL D +KL DF + + S TP ++A
Sbjct: 144 NIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLRSVCGTP---------SYLA 191
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
PEI+ M GY K D+WS GV++Y LL G PPF+ H Q +
Sbjct: 192 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW---------------HRKQML 236
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
+ I G+Y F EW SD KDL+ R LV +KR +A L HP+
Sbjct: 237 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
Score = 99.8 bits (247), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/232 (34%), Positives = 98/232 (42%), Gaps = 62/232 (26%)
Query: 42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---------RSRV 92
T F + Y K EILG+G + V+ C++ T EYAVKIID G S R
Sbjct: 12 THGFYENYEPK-EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 93 FKEVETFHHCQGHPNIIQLLEYYEDD--------------------------ENHER--- 123
KEV+ GHPNIIQL + YE + E R
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 124 ----------HK-RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 172
HK I HRDLKPENIL D +KL DF + + S TP
Sbjct: 131 RALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLRSVCGTP 187
Query: 173 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
++APEI+ M GY K D+WS GV++Y LL G PPF+
Sbjct: 188 ---------SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW 230
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/171 (35%), Positives = 77/171 (45%), Gaps = 27/171 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
I HRDLKPENIL D +KL DF + + TP ++A
Sbjct: 144 NIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTP---------SYLA 191
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
PEI+ M GY K D+WS GV++Y LL G PPF+ H Q +
Sbjct: 192 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW---------------HRKQML 236
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
+ I G+Y F EW SD KDL+ R LV +KR +A L HP+
Sbjct: 237 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFF 287
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 97/232 (41%), Gaps = 62/232 (26%)
Query: 42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---------RSRV 92
T F + Y K EILG+G + V+ C++ T EYAVKIID G S R
Sbjct: 12 THGFYENYEPK-EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREAT 70
Query: 93 FKEVETFHHCQGHPNIIQLLEYYEDD--------------------------ENHER--- 123
KEV+ GHPNIIQL + YE + E R
Sbjct: 71 LKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM 130
Query: 124 ----------HK-RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 172
HK I HRDLKPENIL D +KL DF + + TP
Sbjct: 131 RALLEVICALHKLNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTP 187
Query: 173 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
++APEI+ M GY K D+WS GV++Y LL G PPF+
Sbjct: 188 ---------SYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW 230
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 60/172 (34%), Positives = 77/172 (44%), Gaps = 27/172 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
I HRDLKPENIL D +KL DF + + TP ++A
Sbjct: 131 NIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTP---------SYLA 178
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
PEI+ M GY K D+WS GV++Y LL G PPF+ H Q +
Sbjct: 179 PEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW---------------HRKQML 223
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
+ I G+Y F EW SD KDL+ R LV +KR +A L HP+
Sbjct: 224 MLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQ 275
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 74/220 (33%), Positives = 92/220 (41%), Gaps = 61/220 (27%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---------RSRVFKEVETFHHCQG 104
EILG+G + V+ C++ T EYAVKIID G S R KEV+ G
Sbjct: 10 EILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSG 69
Query: 105 HPNIIQLLEYYEDD--------------------------ENHER-------------HK 125
HPNIIQL + YE + E R HK
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK 129
Query: 126 -RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
I HRDLKPENIL D +KL DF + + TP ++
Sbjct: 130 LNIVHRDLKPENILL---DDDMNIKLTDFGFSCQLDPGEKLREVCGTP---------SYL 177
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
APEI+ M GY K D+WS GV++Y LL G PPF+
Sbjct: 178 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFW 217
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/184 (35%), Positives = 91/184 (49%), Gaps = 37/184 (20%)
Query: 244 EILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
E + H Q I H DLKPENILCV+ D +K+ DF L K + TP
Sbjct: 198 EGIRHMHQMYILHLDLKPENILCVNRDA-KQIKIIDFGLARRYKPREKLKVNFGTP---- 252
Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKR---CDLWSLGVVVYILLCGYPPFYGNCGEDCGW 360
EF+APE+VN YD D+WS+GV+ Y+LL G PF G+ +
Sbjct: 253 -----EFLAPEVVN---------YDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAET-- 296
Query: 361 QRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKH 420
++I +D + E+ IS+EAK+ I +LL+K+ R+SA+ LKH
Sbjct: 297 -------------LNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKH 343
Query: 421 PWIS 424
PW+S
Sbjct: 344 PWLS 347
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 88/219 (40%), Gaps = 64/219 (29%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL 111
K EILG G + V C T L+ A KII + V E+ + H N+IQL
Sbjct: 93 KTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLD-HANLIQL 151
Query: 112 LEYYED---------------------DENHE-----------------RHKR---IAHR 130
+ +E DE++ RH I H
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHL 211
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENILCV+ D +K+ DF L K + TP EF+APE+VN
Sbjct: 212 DLKPENILCVNRDA-KQIKIIDFGLARRYKPREKLKVNFGTP---------EFLAPEVVN 261
Query: 191 AFMGPEASGYDKR---CDLWSLGVVVYILLCGYPPFYGN 226
YD D+WS+GV+ Y+LL G PF G+
Sbjct: 262 ---------YDFVSFPTDMWSVGVIAYMLLSGLSPFLGD 291
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 105/221 (47%), Gaps = 35/221 (15%)
Query: 244 EILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
E L + I HRD+KP +L + +PVKL F G I+ S +
Sbjct: 143 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGF--GVAIQLGES------GLVAGG 194
Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 363
VG+ FMAPE+V + Y K D+W GV+++ILL G PFYG
Sbjct: 195 RVGTPHFMAPEVV------KREPYGKPVDVWGCGVILFILLSGCLPFYGT---------- 238
Query: 364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
+E LF I +G Y +WS IS+ AKDL+RR+L+ D +R++ L HPW+
Sbjct: 239 ------KERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWL 292
Query: 424 ST----AGTAHRPLVTPQVIRRNQSARELSSFAESAMSANR 460
A H P Q +R+ + R+L +A+S+++
Sbjct: 293 KERDRYAYKIHLPETVEQ-LRKFNARRKLKGAVLAAVSSHK 332
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 65/231 (28%)
Query: 45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIID-----KLPGHSRSRVFKEVETF 99
F+D+Y L E++GKG ++ V+ C+N T ++AVKI+D PG S + +E
Sbjct: 24 FEDVYEL-CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 82
Query: 100 HHCQGHPNIIQLLEYYEDD----------------------------------ENHERH- 124
H + HP+I++LLE Y D ++ R
Sbjct: 83 HMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI 141
Query: 125 ---------KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
I HRD+KP +L + +PVKL F G I+ S +
Sbjct: 142 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGF--GVAIQLGES------GLVAG 193
Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
VG+ FMAPE+V + Y K D+W GV+++ILL G PFYG
Sbjct: 194 GRVGTPHFMAPEVV------KREPYGKPVDVWGCGVILFILLSGCLPFYGT 238
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 105/221 (47%), Gaps = 35/221 (15%)
Query: 244 EILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 303
E L + I HRD+KP +L + +PVKL F G I+ S +
Sbjct: 141 EALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGF--GVAIQLGES------GLVAGG 192
Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 363
VG+ FMAPE+V + Y K D+W GV+++ILL G PFYG
Sbjct: 193 RVGTPHFMAPEVV------KREPYGKPVDVWGCGVILFILLSGCLPFYGT---------- 236
Query: 364 ETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
+E LF I +G Y +WS IS+ AKDL+RR+L+ D +R++ L HPW+
Sbjct: 237 ------KERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWL 290
Query: 424 ST----AGTAHRPLVTPQVIRRNQSARELSSFAESAMSANR 460
A H P Q +R+ + R+L +A+S+++
Sbjct: 291 KERDRYAYKIHLPETVEQ-LRKFNARRKLKGAVLAAVSSHK 330
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 100/231 (43%), Gaps = 65/231 (28%)
Query: 45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIID-----KLPGHSRSRVFKEVETF 99
F+D+Y L E++GKG ++ V+ C+N T ++AVKI+D PG S + +E
Sbjct: 22 FEDVYEL-CEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80
Query: 100 HHCQGHPNIIQLLEYYEDD----------------------------------ENHERH- 124
H + HP+I++LLE Y D ++ R
Sbjct: 81 HMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI 139
Query: 125 ---------KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
I HRD+KP +L + +PVKL F G I+ S +
Sbjct: 140 LEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGF--GVAIQLGES------GLVAG 191
Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
VG+ FMAPE+V + Y K D+W GV+++ILL G PFYG
Sbjct: 192 GRVGTPHFMAPEVV------KREPYGKPVDVWGCGVILFILLSGCLPFYGT 236
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 99.0 bits (245), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 75/218 (34%), Positives = 107/218 (49%), Gaps = 36/218 (16%)
Query: 211 VVVYILLCGYPPFYGNCGEDCGWQRGETCH----ACQEILFHSIQQGIAHRDLKPENILC 266
V++ L G F ED E + AC E L H + I H D+KPENI+C
Sbjct: 124 VLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQAC-EGLKHMHEHSIVHLDIKPENIMC 182
Query: 267 VHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASG 326
+ S VK+ DF L + + + V AT AEF APEIV+ E G
Sbjct: 183 -ETKKASSVKIIDFGLATKLNPDEIVKVTTAT---------AEFAAPEIVDR----EPVG 228
Query: 327 YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPE 386
+ D+W++GV+ Y+LL G PF GED ET ++++ ++F E
Sbjct: 229 F--YTDMWAIGVLGYVLLSGLSPF---AGED----DLET--------LQNVKRCDWEFDE 271
Query: 387 GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
+S++S EAKD I+ LL K+ RKRL+ L+HPW+
Sbjct: 272 DAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLK 309
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 89/240 (37%), Gaps = 71/240 (29%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLE 113
E LG GA+ V CV T + K I+ + V E+ + HP +I L +
Sbjct: 57 EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLH-HPKLINLHD 115
Query: 114 YYEDDE-----------------------------------------NHERHKRIAHRDL 132
+ED H I H D+
Sbjct: 116 AFEDKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDI 175
Query: 133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF 192
KPENI+C + S VK+ DF L + + + V AT AEF APEIV+
Sbjct: 176 KPENIMC-ETKKASSVKIIDFGLATKLNPDEIVKVTTAT---------AEFAAPEIVDR- 224
Query: 193 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED----------CGWQRGETCHAC 242
E G+ D+W++GV+ Y+LL G PF GED C W+ E +
Sbjct: 225 ---EPVGF--YTDMWAIGVLGYVLLSGLSPF---AGEDDLETLQNVKRCDWEFDEDAFSS 276
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 78/171 (45%), Gaps = 27/171 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
I HRDLKPENIL D ++L DF ++ + TP ++A
Sbjct: 220 NIVHRDLKPENILL---DDNMQIRLSDFGFSCHLEPGEKLRELCGTP---------GYLA 267
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
PEI+ M GY K DLW+ GV+++ LL G PPF+ H Q +
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFW---------------HRRQIL 312
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
+ I +G Y F EW S KDLI RLL D RL+A L+HP+
Sbjct: 313 MLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 87/219 (39%), Gaps = 60/219 (27%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSRVFKEVETFHHCQGH 105
+++G+G + V+ CV+ T E+AVKI++ + R +E GH
Sbjct: 100 DVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGH 159
Query: 106 PNIIQLLEYYEDD--------------------------ENHERH--------------K 125
P+II L++ YE E R
Sbjct: 160 PHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHAN 219
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
I HRDLKPENIL D ++L DF ++ + TP ++A
Sbjct: 220 NIVHRDLKPENILL---DDNMQIRLSDFGFSCHLEPGEKLRELCGTP---------GYLA 267
Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
PEI+ M GY K DLW+ GV+++ LL G PPF+
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFW 306
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 93/174 (53%), Gaps = 38/174 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
QG AHRDLKPEN+L D+ +KL DF L + K N H L T GS +
Sbjct: 127 QGYAHRDLKPENLLF---DEYHKLKLIDFGLCAKPKGNKDYH-------LQTCCGSLAYA 176
Query: 312 APEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
APE++ +++G EA D+WS+G+++Y+L+CG+ PF + A
Sbjct: 177 APELIQGKSYLGSEA-------DVWSMGILLYVLMCGFLPF-----------DDDNVMA- 217
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
L+ I +G YD P +W +S + L++++L D +KR+S ++L HPWI
Sbjct: 218 ---LYKKIMRGKYDVP--KW--LSPSSILLLQQMLQVDPKKRISMKNLLNHPWI 264
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/212 (31%), Positives = 95/212 (44%), Gaps = 59/212 (27%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDK-LPGHSRSRVFKEVETF------HHCQGH- 105
E +G G +A V+ +ILT A+KI+DK G R+ E+E H CQ +
Sbjct: 16 ETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYH 75
Query: 106 -----PNIIQLLEY----------YEDDENHERHKRI-----------------AHRDLK 133
I +LEY D E R+ AHRDLK
Sbjct: 76 VLETANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLK 135
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV--NA 191
PEN+L D+ +KL DF L + K N H L T GS + APE++ +
Sbjct: 136 PENLLF---DEYHKLKLIDFGLCAKPKGNKDYH-------LQTCCGSLAYAAPELIQGKS 185
Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
++G EA D+WS+G+++Y+L+CG+ PF
Sbjct: 186 YLGSEA-------DVWSMGILLYVLMCGFLPF 210
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 84/182 (46%), Gaps = 38/182 (20%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
FHS Q + H+DLKPENIL SP+K+ DF L F + HS A G
Sbjct: 140 FHS--QHVVHKDLKPENILFQDTSPHSPIKIIDFGLAE--LFKSDEHSTNAA-------G 188
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
+A +MAPE+ +CD+WS GVV+Y LL G PF G E+
Sbjct: 189 TALYMAPEVFK-------RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQ------- 234
Query: 367 HACQEILFHSIQQGHYDFPE--GEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
Q+ Y P E ++ +A DL++++L KD +R SAA VL H W
Sbjct: 235 -----------QKATYKEPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLHHEWFK 283
Query: 425 TA 426
A
Sbjct: 284 QA 285
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 91/232 (39%), Gaps = 67/232 (28%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS-RSRVFKEVETFHHCQGH 105
DL+ K + LG GA+ V + LE +K I+K ++ E+E H
Sbjct: 22 DLFIFKRK-LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD-H 79
Query: 106 PNIIQLLEYYEDDEN--------------------------------------------- 120
PNII++ E +ED N
Sbjct: 80 PNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAY 139
Query: 121 -HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
H +H + H+DLKPENIL SP+K+ DF L F + HS A G
Sbjct: 140 FHSQH--VVHKDLKPENILFQDTSPHSPIKIIDFGLAE--LFKSDEHSTNAA-------G 188
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
+A +MAPE+ +CD+WS GVV+Y LL G PF G E+
Sbjct: 189 TALYMAPEVFK-------RDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEV 233
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 87/171 (50%), Gaps = 38/171 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 133 VIHRDIKPENLLLGSNGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPP 179
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF H QE
Sbjct: 180 EMIEGRM------HDEKVDLWSLGVLCYEFLVGMPPF--------------EAHTYQET- 218
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
+ I + + FP+ +++ A+DLI RLL +A +RL+ A VL+HPWI
Sbjct: 219 YRRISRVEFTFPD----FVTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR-HPNIL 75
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 76 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIH 135
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 136 RDIKPENLLLGSNGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPPEMI 182
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF + ++
Sbjct: 183 EGRM------HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET 218
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/171 (33%), Positives = 87/171 (50%), Gaps = 38/171 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + T G+ +++ P
Sbjct: 133 VIHRDIKPENLLLGSNGEL---KIADF--------GWSVHAP--SSRRDTLCGTLDYLPP 179
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF H QE
Sbjct: 180 EMIEGRM------HDEKVDLWSLGVLCYEFLVGMPPF--------------EAHTYQET- 218
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
+ I + + FP+ +++ A+DLI RLL +A +RL+ A VL+HPWI
Sbjct: 219 YRRISRVEFTFPD----FVTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 17 GRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLR-HPNIL 75
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 76 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIH 135
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + T G+ +++ PE++
Sbjct: 136 RDIKPENLLLGSNGEL---KIADF--------GWSVHAP--SSRRDTLCGTLDYLPPEMI 182
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF + ++
Sbjct: 183 EGRM------HDEKVDLWSLGVLCYEFLVGMPPFEAHTYQET 218
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCV 267
V++Y + G F E E +++ L H + H DLKPENI+
Sbjct: 124 VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFT 183
Query: 268 HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY 327
+ + +KL DF L + + SV G+AEF APE+ + GY
Sbjct: 184 -TKRSNELKLIDFGLTAHLDPKQSVK---------VTTGTAEFAAPEVAEG----KPVGY 229
Query: 328 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEG 387
D+WS+GV+ YILL G PF G ++ +++ ++ +
Sbjct: 230 --YTDMWSVGVLSYILLSGLSPFGGENDDET---------------LRNVKSCDWNMDDS 272
Query: 388 EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVTP 436
+S IS++ KD IR+LL+ D R++ L+HPW++ R P
Sbjct: 273 AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 321
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 86/234 (36%), Gaps = 65/234 (27%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLE 113
E LG GA+ V T +A K + + V KE++T + HP ++ L +
Sbjct: 57 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR-HPTLVNLHD 115
Query: 114 YYEDDEN-----------------------------------------HERHKRIAHRDL 132
+EDD H H DL
Sbjct: 116 AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDL 175
Query: 133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF 192
KPENI+ + + +KL DF L + + SV G+AEF APE+
Sbjct: 176 KPENIMFT-TKRSNELKLIDFGLTAHLDPKQSVK---------VTTGTAEFAAPEVAEG- 224
Query: 193 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-------CGWQRGETC 239
+ GY D+WS+GV+ YILL G PF G ++ C W ++
Sbjct: 225 ---KPVGY--YTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSA 273
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 99/229 (43%), Gaps = 34/229 (14%)
Query: 211 VVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCV 267
V++Y + G F E E +++ L H + H DLKPENI+
Sbjct: 230 VMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFT 289
Query: 268 HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY 327
+ + +KL DF L + + SV G+AEF APE+ + GY
Sbjct: 290 -TKRSNELKLIDFGLTAHLDPKQSVK---------VTTGTAEFAAPEVAEG----KPVGY 335
Query: 328 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEG 387
D+WS+GV+ YILL G PF G ++ +++ ++ +
Sbjct: 336 --YTDMWSVGVLSYILLSGLSPFGGENDDET---------------LRNVKSCDWNMDDS 378
Query: 388 EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVTP 436
+S IS++ KD IR+LL+ D R++ L+HPW++ R P
Sbjct: 379 AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNAPGRDSQIP 427
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 86/234 (36%), Gaps = 65/234 (27%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLE 113
E LG GA+ V T +A K + + V KE++T + HP ++ L +
Sbjct: 163 EELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR-HPTLVNLHD 221
Query: 114 YYEDDEN-----------------------------------------HERHKRIAHRDL 132
+EDD H H DL
Sbjct: 222 AFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDL 281
Query: 133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF 192
KPENI+ + + +KL DF L + + SV G+AEF APE+
Sbjct: 282 KPENIMFT-TKRSNELKLIDFGLTAHLDPKQSVK---------VTTGTAEFAAPEVAEG- 330
Query: 193 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-------CGWQRGETC 239
+ GY D+WS+GV+ YILL G PF G ++ C W ++
Sbjct: 331 ---KPVGY--YTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSA 379
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 84/190 (44%), Gaps = 41/190 (21%)
Query: 237 ETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL 296
+ C A Q HS I H D++PENI+ + S +K+ +F +K P
Sbjct: 110 QVCEALQ--FLHS--HNIGHFDIRPENIIY-QTRRSSTIKIIEFGQARQLK-------PG 157
Query: 297 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYD---KRCDLWSLGVVVYILLCGYPPFYGN 353
LL F APE + PE +D D+WSLG +VY+LL G PF
Sbjct: 158 DNFRLL-------FTAPE----YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAE 206
Query: 354 CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS 413
+ + +I Y F E + IS EA D + RLLVK+ + R++
Sbjct: 207 TNQQ---------------IIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMT 251
Query: 414 AASVLKHPWI 423
A+ L+HPW+
Sbjct: 252 ASEALQHPWL 261
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 88/232 (37%), Gaps = 67/232 (28%)
Query: 46 QDLYR--LKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQ 103
++LY + E LG+G + V CV ++ Y K + K+ G + V KE+ + +
Sbjct: 1 KELYEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFV-KVKGTDQVLVKKEISILNIAR 59
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERH--------------- 124
H NI+ L E +E E +ER
Sbjct: 60 -HRNILHLHESFESMEELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFL 118
Query: 125 --KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
I H D++PENI+ + S +K+ +F +K P LL
Sbjct: 119 HSHNIGHFDIRPENIIY-QTRRSSTIKIIEFGQARQLK-------PGDNFRLL------- 163
Query: 183 FMAPEIVNAFMGPEASGYD---KRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
F APE + PE +D D+WSLG +VY+LL G PF +
Sbjct: 164 FTAPE----YYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQI 211
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 36/176 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
Q I H DLKP+NIL L +K+ DF + I + + TP E+
Sbjct: 149 QNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTP---------EY 199
Query: 311 MAPEIVNAFMGPEASGYD---KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
+APEI+N YD D+W++G++ Y+LL PF G ++
Sbjct: 200 LAPEILN---------YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET--------- 241
Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
+ +I Q + D+ E +S++S A D I+ LLVK+ KR +A L H W+
Sbjct: 242 ------YLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWL 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/255 (24%), Positives = 96/255 (37%), Gaps = 65/255 (25%)
Query: 45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS--RSRVFKEVETFHHC 102
F + Y L + LG+G +A V+ C++ T EYA K + K R+ + E+
Sbjct: 26 FNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELA 85
Query: 103 QGHPNIIQLLEYYED----------------------------DEN-------------- 120
+ P +I L E YE+ EN
Sbjct: 86 KSCPRVINLHEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVY 145
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
+ I H DLKP+NIL L +K+ DF + I + + TP
Sbjct: 146 YLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTP-------- 197
Query: 181 AEFMAPEIVNAFMGPEASGYD---KRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE 237
E++APEI+N YD D+W++G++ Y+LL PF G ++ +
Sbjct: 198 -EYLAPEILN---------YDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQ 247
Query: 238 TCHACQEILFHSIQQ 252
E F S+ Q
Sbjct: 248 VNVDYSEETFSSVSQ 262
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 86/177 (48%), Gaps = 38/177 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ + HRD+KPEN+L +L K+ DF SVH+P + L G+ +++
Sbjct: 127 KKVIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRAAL--CGTLDYL 173
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
PE++ M +D++ DLWSLGV+ Y L G PPF N +D
Sbjct: 174 PPEMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDT------------- 214
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 215 --YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 13 GRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE K++ H
Sbjct: 72 RLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIH 131
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 132 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRAAL--CGTLDYLPPEMI 178
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N +D
Sbjct: 179 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQDT 214
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 134 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRXXLX--GTLDYLPP 180
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 181 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 219
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 220 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 270
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 76
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 77 RLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 137 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRXXLX--GTLDYLPPEMI 183
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 184 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 155 VIHRDIKPENLLLGSAGEL---KIADFGW--------SVHAPSSRRTTL--CGTLDYLPP 201
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 202 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 240
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 241 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 291
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 97
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 98 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 157
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 158 RDIKPENLLLGSAGEL---KIADFGW--------SVHAPSSRRTTL--CGTLDYLPPEMI 204
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 205 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 240
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 80/175 (45%), Gaps = 26/175 (14%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATPLLLTPVGSAE 309
QGI HRD+KPEN L ++ +KL DF L K N + + T G+
Sbjct: 186 NQGICHRDIKPENFL-FSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTK-----AGTPY 239
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
F+APE++N Y +CD WS GV++++LL G PF G D Q
Sbjct: 240 FVAPEVLNT----TNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQ-------- 287
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
+ F ++ +S A+DL+ LL ++ +R A L+HPWIS
Sbjct: 288 -------VLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWIS 335
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 11/100 (11%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATPLLLTPVGSAEFMA 185
I HRD+KPEN L ++ +KL DF L K N + + T G+ F+A
Sbjct: 189 ICHRDIKPENFL-FSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTK-----AGTPYFVA 242
Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
PE++N Y +CD WS GV++++LL G PF G
Sbjct: 243 PEVLNT----TNESYGPKCDAWSAGVLLHLLLMGAVPFPG 278
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK-----LPGHSRSRVFKEVETF 99
Q Y LKG I G+G+Y V+ + T A+KI++K + R+ EV
Sbjct: 24 LQKKYHLKGAI-GQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLM 82
Query: 100 HHCQGHPNIIQLLEYYEDDE 119
HPNI +L E YED++
Sbjct: 83 KKLH-HPNIARLYEVYEDEQ 101
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 146 VIHRDIKPENLLLGSAGEL---KIADFGW--------SVHAPSSRRTTL--CGTLDYLPP 192
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 193 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 231
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 232 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 282
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 30 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 88
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 89 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 148
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 149 RDIKPENLLLGSAGEL---KIADFGW--------SVHAPSSRRTTL--CGTLDYLPPEMI 195
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 196 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 231
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 134 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPP 180
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 181 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 219
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 220 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 270
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 76
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 77 RLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 137 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPPEMI 183
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 184 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 131 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRXXL--CGTLDYLPP 177
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 178 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 216
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 217 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 267
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 73
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 74 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 133
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 134 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRXXL--CGTLDYLPPEMI 180
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 181 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 216
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 129 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPP 175
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 176 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 214
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 215 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 132 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPPEMI 178
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 179 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 134 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPP 180
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 181 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 219
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 220 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 270
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 76
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 77 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 137 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPPEMI 183
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 184 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 132 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPP 178
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 179 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 217
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 218 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 268
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 74
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 135 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPPEMI 181
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 182 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 38/171 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 133 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPP 179
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 180 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 218
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+
Sbjct: 219 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 265
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 17 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 75
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 76 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 135
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 136 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPPEMI 182
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 183 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 218
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 132 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRXXL--CGTLDYLPP 178
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 179 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 217
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 218 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 268
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 74
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 135 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRXXL--CGTLDYLPPEMI 181
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 182 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 38/172 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 132 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRAAL--CGTLDYLPP 178
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 179 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 217
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+
Sbjct: 218 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 265
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 74
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 135 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRAAL--CGTLDYLPPEMI 181
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 182 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + T G+ +++ P
Sbjct: 132 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAP--SSRRTTLCGTLDYLPP 178
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 179 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 217
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 218 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 268
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 74
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + T G+ +++ PE++
Sbjct: 135 RDIKPENLLLGSAGEL---KIADF--------GWSVHAP--SSRRTTLCGTLDYLPPEMI 181
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 182 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 38/172 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 129 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTXL--CGTLDYLPP 175
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 176 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 214
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+
Sbjct: 215 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 132 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTXL--CGTLDYLPPEMI 178
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 179 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 38/171 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 128 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPP 174
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 175 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 213
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+
Sbjct: 214 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 260
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 12 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 70
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 71 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 130
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 131 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTTL--CGTLDYLPPEMI 177
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 178 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 213
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 38/172 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 129 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRXXL--CGTLDYLPP 175
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 176 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 214
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+
Sbjct: 215 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 132 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRXXL--CGTLDYLPPEMI 178
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 179 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 38/171 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + T G+ +++ P
Sbjct: 126 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAP--SSRRTTLCGTLDYLPP 172
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 173 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 211
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+
Sbjct: 212 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 258
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 92/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V + A+K++ K ++ +EVE H + HPNI+
Sbjct: 10 GRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 68
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 69 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 128
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + T G+ +++ PE++
Sbjct: 129 RDIKPENLLLGSAGEL---KIADF--------GWSVHAP--SSRRTTLCGTLDYLPPEMI 175
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 176 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 211
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 129 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTEL--CGTLDYLPP 175
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 176 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 214
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 215 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 132 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTEL--CGTLDYLPPEMI 178
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 179 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 84/172 (48%), Gaps = 38/172 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 129 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRAAL--CGTLDYLPP 175
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 176 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 214
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+
Sbjct: 215 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITA 262
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 132 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRAAL--CGTLDYLPPEMI 178
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 179 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 38/171 (22%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF S H+P + L+ G+ +++ P
Sbjct: 130 VIHRDIKPENLLLGSAGEL---KIADF--------GWSCHAPSSRRTTLS--GTLDYLPP 176
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 177 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 215
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+
Sbjct: 216 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWIT 262
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 72
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 73 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 132
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF S H+P + L+ G+ +++ PE++
Sbjct: 133 RDIKPENLLLGSAGEL---KIADF--------GWSCHAPSSRRTTLS--GTLDYLPPEMI 179
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 180 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 84/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 134 VIHRDIKPENLLLGSAGEL---KIADFGW--------SVHAPSSRRTTL--CGTLDYLPP 180
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E + E +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 181 EXI------EGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 219
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 220 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPXLREVLEHPWITANSS 270
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 92/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 76
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 77 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE +
Sbjct: 137 RDIKPENLLLGSAGEL---KIADFGW--------SVHAPSSRRTTL--CGTLDYLPPEXI 183
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
E +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 184 ------EGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 130 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRDTL--CGTLDYLPP 176
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 177 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 215
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 216 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 72
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 73 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 132
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 133 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRDTL--CGTLDYLPPEMI 179
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 180 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 130 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTDL--CGTLDYLPP 176
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 177 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 215
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 216 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 72
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 73 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 132
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 133 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTDL--CGTLDYLPPEMI 179
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 180 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 215
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 134 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTDL--CGTLDYLPP 180
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 181 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 219
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 220 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 270
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 18 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 76
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 77 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 136
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 137 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTDL--CGTLDYLPPEMI 183
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 184 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 219
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 79.3 bits (194), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 129 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTDL--CGTLDYLPP 175
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 176 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 214
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 215 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 132 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTDL--CGTLDYLPPEMI 178
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 179 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 129 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTDL--CGTLDYLPP 175
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 176 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 214
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 215 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 265
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 13 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 71
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 72 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 131
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 132 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRTDL--CGTLDYLPPEMI 178
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 179 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 214
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 155 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRDDL--CGTLDYLPP 201
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 202 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 240
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 241 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 291
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 39 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 97
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 98 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 157
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 158 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRDDL--CGTLDYLPPEMI 204
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 205 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 240
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ +F SVH+P + L G+ +++ P
Sbjct: 131 VIHRDIKPENLLLGSAGEL---KIANFGW--------SVHAPSSRRTTL--CGTLDYLPP 177
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 178 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 216
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 217 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 267
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 15 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 73
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 74 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 133
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ +F SVH+P + L G+ +++ PE++
Sbjct: 134 RDIKPENLLLGSAGEL---KIANFGW--------SVHAPSSRRTTL--CGTLDYLPPEMI 180
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 181 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 216
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ +F SVH+P + L G+ +++ P
Sbjct: 132 VIHRDIKPENLLLGSAGEL---KIANF--------GWSVHAPSSRRTTL--CGTLDYLPP 178
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 179 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 217
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 218 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 268
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 74
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ +F SVH+P + L G+ +++ PE++
Sbjct: 135 RDIKPENLLLGSAGEL---KIANF--------GWSVHAPSSRRTTL--CGTLDYLPPEMI 181
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 182 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 88/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
T G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 197 ------WTLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 285 LKNGVNDIKNHKWFATT 301
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 93/227 (40%), Gaps = 64/227 (28%)
Query: 42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---------GHSRSRV 92
T+ R+K LG G++ V ++ T YA+KI+DK + R+
Sbjct: 38 TAHLDQFERIK--TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 93 FKEV------ETFHHCQGHPNIIQLLEYYEDDENHERHKRIA------------------ 128
+ V + + + N+ ++EY E +RI
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 129 ---------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
+RDLKPEN+L DQ +++ DF +K T T G
Sbjct: 156 EYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WTLCG 201
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 202 TPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 88/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN++ DQ +K+ DF L +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLMI---DQQGYIKVTDFGLAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 95/234 (40%), Gaps = 78/234 (33%)
Query: 42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHH 101
T+ R+K LG G++ V ++ T YA+KI+DK + KE+E H
Sbjct: 37 TAHLDQFERIK--TLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKEIE---H 87
Query: 102 CQGHPNIIQLLEY---------YEDDEN-----------------------HERHKR--- 126
I+Q + + ++D+ N E H R
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 127 --------------IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 172
+ +RDLKPEN++ DQ +K+ DF L +K T
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIKVTDFGLAKRVKGRT--------- 195
Query: 173 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 196 --WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 85/175 (48%), Gaps = 38/175 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KPEN+L +L K+ DF SVH+P + L G+ +++ P
Sbjct: 132 VIHRDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRDDL--CGTLDYLPP 178
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 179 EMIEGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET--------------- 217
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGT 428
+ I + + FP+ +++ A+DLI RLL + +R VL+HPWI+ +
Sbjct: 218 YKRISRVEFTFPD----FVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 268
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 93/222 (41%), Gaps = 63/222 (28%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNII 109
G LGKG + +V ++ A+K++ K ++ +EVE H + HPNI+
Sbjct: 16 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLR-HPNIL 74
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE KR+ H
Sbjct: 75 RLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIH 134
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +L K+ DF SVH+P + L G+ +++ PE++
Sbjct: 135 RDIKPENLLLGSAGEL---KIADF--------GWSVHAPSSRRDDL--CGTLDYLPPEMI 181
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 231
M +D++ DLWSLGV+ Y L G PPF N ++
Sbjct: 182 EGRM------HDEKVDLWSLGVLCYEFLVGKPPFEANTYQET 217
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 88/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 132 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 181
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
T G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 182 ------WTLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 225
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 226 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 269
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 270 LKDGVNDIKNHKWFATT 286
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 89/215 (41%), Gaps = 62/215 (28%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLP---------GHSRSRVFKEV------ET 98
+ LG G++ V ++ T YA+KI+DK + R+ + V +
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 92
Query: 99 FHHCQGHPNIIQLLEYYEDDENHERHKRIA---------------------------HRD 131
+ + N+ ++EY E +RI +RD
Sbjct: 93 EFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRD 152
Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
LKPEN+L DQ +++ DF +K T T G+ E++APEI+
Sbjct: 153 LKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WTLCGTPEYLAPEII-- 196
Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 197 ----LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 227
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +K+ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIKVADFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +K+ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIKVADFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +K+ DF +K T
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIKVADFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 285 LKNGVNDIKNHKWFATT 301
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 78/172 (45%), Gaps = 33/172 (19%)
Query: 64 VQTCVNI--LTELEYAVK-------IIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEY 114
+Q VN L +LE++ K +++ PG + + F Q++
Sbjct: 95 IQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 154
Query: 115 YEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLL 174
+E + + +RDLKPEN+L DQ +K+ DF +K T
Sbjct: 155 FE----YLHSLDLIYRDLKPENLLI---DQQGYIKVADFGFAKRVKGRT----------- 196
Query: 175 LTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 197 WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +K+ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIKVADFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +K+ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIKVADFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +K+ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIKVADFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +K+ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIKVADFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 93/219 (42%), Gaps = 61/219 (27%)
Query: 49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
YRL I GKG +A V+ +ILT E AVKIIDK L S ++F+EV HP
Sbjct: 16 YRLLKTI-GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK-VLNHP 73
Query: 107 NIIQLLEYYEDDEN-------------------HERHKR--------------------- 126
NI++L E E ++ H R K
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLK EN+L D +K+ DF + F L T GS + AP
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNK---------LDTFCGSPPYAAP 181
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
E+ F G + G + D+WSLGV++Y L+ G PF G
Sbjct: 182 EL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDG 215
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 38/188 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
Q+ I HRDLK EN+L D +K+ DF + F L T GS +
Sbjct: 131 QKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNK---------LDTFCGSPPY 178
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
APE+ F G + G + D+WSLGV++Y L+ G PF G ++
Sbjct: 179 AAPEL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE------------- 220
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA--GT 428
L + +G Y P +S + ++L+++ L+ + KR + ++K W++
Sbjct: 221 --LRERVLRGKYRIP----FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDD 274
Query: 429 AHRPLVTP 436
+P V P
Sbjct: 275 ELKPYVAP 282
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 88/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 167 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGAT----- 216
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
T G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 217 ------WTLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 260
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 261 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 304
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 305 LKNGVNDIKNHKWFATT 321
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 54/100 (54%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T T G+ E++AP
Sbjct: 183 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGAT-----------WTLCGTPEYLAP 228
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 229 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 262
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 93/219 (42%), Gaps = 61/219 (27%)
Query: 49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
YRL I GKG +A V+ +ILT E AVKIIDK L S ++F+EV HP
Sbjct: 16 YRLLKTI-GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK-VLNHP 73
Query: 107 NIIQLLEYYEDDEN-------------------HERHKR--------------------- 126
NI++L E E ++ H R K
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLK EN+L D +K+ DF + F L T GS + AP
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNK---------LDTFCGSPPYAAP 181
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
E+ F G + G + D+WSLGV++Y L+ G PF G
Sbjct: 182 EL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDG 215
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 38/188 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
Q+ I HRDLK EN+L D +K+ DF + F L T GS +
Sbjct: 131 QKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNK---------LDTFCGSPPY 178
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
APE+ F G + G + D+WSLGV++Y L+ G PF G ++
Sbjct: 179 AAPEL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE------------- 220
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA--GT 428
L + +G Y P +S + ++L+++ L+ + KR + ++K W++
Sbjct: 221 --LRERVLRGKYRIP----FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDD 274
Query: 429 AHRPLVTP 436
+P V P
Sbjct: 275 ELKPYVEP 282
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLAGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLAGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 90/193 (46%), Gaps = 44/193 (22%)
Query: 239 CHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
C EI L H Q+GI +RDLKPENI+ H VKL DF L S+H
Sbjct: 124 CFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGH---VKLTDFGL-----CKESIHDG 175
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
T T G+ E+MAPEI+ SG+++ D WSLG ++Y +L G PPF G
Sbjct: 176 TVTH---TFCGTIEYMAPEILMR------SGHNRAVDWWSLGALMYDMLTGAPPFTGE-- 224
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-- 413
R +T I + + P ++ EA+DL+++LL ++A RL
Sbjct: 225 -----NRKKT--------IDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAG 267
Query: 414 ---AASVLKHPWI 423
A V HP+
Sbjct: 268 PGDAGEVQAHPFF 280
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 55/105 (52%), Gaps = 17/105 (16%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
H K I +RDLKPENI+ H VKL DF L S+H T T G+
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGH---VKLTDFGL-----CKESIHDGTVTH---TFCGT 184
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
E+MAPEI+ SG+++ D WSLG ++Y +L G PPF G
Sbjct: 185 IEYMAPEILMR------SGHNRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLXGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLXGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN++ DQ +K+ DF +K T
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 285 LKNGVNDIKNHKWFATT 301
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN++ DQ +K+ DF +K T G+ E++AP
Sbjct: 163 LIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 208
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 209 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN++ DQ +K+ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN++ DQ +K+ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN++ DQ +K+ DF +K T
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 285 LKNGVNDIKNHKWFATT 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN++ DQ +K+ DF +K T G+ E++AP
Sbjct: 163 LIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 208
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 209 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN++ DQ +K+ DF +K T
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 285 LKNGVNDIKNHKWFATT 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN++ DQ +K+ DF +K T G+ E++AP
Sbjct: 163 LIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 208
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 209 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN++ DQ +K+ DF +K T
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 285 LKNGVNDIKNHKWFATT 301
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN++ DQ +K+ DF +K T G+ E++AP
Sbjct: 163 LIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 208
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 209 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN++ DQ +K+ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN++ DQ +K+ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLMI---DQQGYIKVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 88/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN++ DQ +++ DF L +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLMI---DQQGYIQVTDFGLAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 95/234 (40%), Gaps = 78/234 (33%)
Query: 42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHH 101
T+ R+K LG G++ V ++ T YA+KI+DK + KE+E H
Sbjct: 37 TAHLDQFERIK--TLGTGSFGRVMLVKHMETGNHYAMKILDK----QKVVKLKEIE---H 87
Query: 102 CQGHPNIIQLLEY---------YEDDEN-----------------------HERHKR--- 126
I+Q + + ++D+ N E H R
Sbjct: 88 TLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYA 147
Query: 127 --------------IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 172
+ +RDLKPEN++ DQ +++ DF L +K T
Sbjct: 148 AQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGYIQVTDFGLAKRVKGRT--------- 195
Query: 173 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 196 --WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 93/219 (42%), Gaps = 61/219 (27%)
Query: 49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
YRL I GKG +A V+ +ILT E AV+IIDK L S ++F+EV HP
Sbjct: 16 YRLLKTI-GKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK-VLNHP 73
Query: 107 NIIQLLEYYEDDEN-------------------HERHKR--------------------- 126
NI++L E E ++ H R K
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLK EN+L D +K+ DF + F L T GS + AP
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNK---------LDTFCGSPPYAAP 181
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
E+ F G + G + D+WSLGV++Y L+ G PF G
Sbjct: 182 EL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDG 215
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 83/188 (44%), Gaps = 38/188 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
Q+ I HRDLK EN+L D +K+ DF + F L T GS +
Sbjct: 131 QKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNK---------LDTFCGSPPY 178
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
APE+ F G + G + D+WSLGV++Y L+ G PF G ++
Sbjct: 179 AAPEL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE------------- 220
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA--GT 428
L + +G Y P +S + ++L+++ L+ + KR + ++K W++
Sbjct: 221 --LRERVLRGKYRIP----FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDD 274
Query: 429 AHRPLVTP 436
+P V P
Sbjct: 275 ELKPYVEP 282
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 285 LKNGVNDIXNHKWFATT 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 163 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 208
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 209 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 89/193 (46%), Gaps = 44/193 (22%)
Query: 239 CHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
C EI L H Q+GI +RDLKPENI+ H VKL DF L S+H
Sbjct: 124 CFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGH---VKLTDFGL-----CKESIHDG 175
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
T G+ E+MAPEI+ SG+++ D WSLG ++Y +L G PPF G
Sbjct: 176 TVTHXF---CGTIEYMAPEILMR------SGHNRAVDWWSLGALMYDMLTGAPPFTGE-- 224
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS-- 413
R +T I + + P ++ EA+DL+++LL ++A RL
Sbjct: 225 -----NRKKT--------IDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAG 267
Query: 414 ---AASVLKHPWI 423
A V HP+
Sbjct: 268 PGDAGEVQAHPFF 280
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 54/105 (51%), Gaps = 17/105 (16%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
H K I +RDLKPENI+ H VKL DF L S+H T G+
Sbjct: 136 HLHQKGIIYRDLKPENIMLNHQGH---VKLTDFGL-----CKESIHDGTVTHXF---CGT 184
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
E+MAPEI+ SG+++ D WSLG ++Y +L G PPF G
Sbjct: 185 IEYMAPEILMR------SGHNRAVDWWSLGALMYDMLTGAPPFTG 223
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYQMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYQMAAGYPPFFAD 241
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 92/219 (42%), Gaps = 61/219 (27%)
Query: 49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
YRL I GKG +A V+ +ILT E AVKIIDK L S ++F+EV HP
Sbjct: 9 YRLLKTI-GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK-VLNHP 66
Query: 107 NIIQLLEYYEDDEN-----------------------HERHKR----------------- 126
NI++L E E ++ E+ R
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLK EN+L D +K+ DF + F + T GS + AP
Sbjct: 127 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLD---------TFCGSPPYAAP 174
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
E+ F G + G D+WSLGV++Y L+ G PF G
Sbjct: 175 EL---FQGKKYDG--PEVDVWSLGVILYTLVSGSLPFDG 208
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 90/211 (42%), Gaps = 42/211 (19%)
Query: 232 GWQRGETCHACQEILFHSIQ----QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK 287
GW + + A + ++Q + I HRDLK EN+L D +K+ DF +
Sbjct: 101 GWMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFT 157
Query: 288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
F + T GS + APE+ F G + G D+WSLGV++Y L+ G
Sbjct: 158 FGNKLD---------TFCGSPPYAAPEL---FQGKKYDG--PEVDVWSLGVILYTLVSGS 203
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF G ++ L + +G Y P +S + ++L+++ L+ +
Sbjct: 204 LPFDGQNLKE---------------LRERVLRGKYRIP----FYMSTDCENLLKKFLILN 244
Query: 408 ARKRLSAASVLKHPWISTA--GTAHRPLVTP 436
KR + ++K W++ +P V P
Sbjct: 245 PSKRGTLEQIMKDRWMNVGHEDDELKPYVEP 275
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 285 LKNGVNDIKNHKWFATT 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 163 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 208
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 209 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 285 LKNGVNDIKNHKWFATT 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 163 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 208
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 209 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 285 LKNGVNDIKNHKWFATT 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 64/227 (28%)
Query: 42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---------GHSRSRV 92
T+ R+K LG G++ V ++ T YA+KI+DK + R+
Sbjct: 38 TAHLDQFERIK--TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 93 FKEV------ETFHHCQGHPNIIQLLEYYEDDENHERHKRIA------------------ 128
+ V + + + N+ ++EY E +RI
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 155
Query: 129 ---------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
+RDLKPEN+L DQ +++ DF +K T G
Sbjct: 156 EYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCG 201
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 202 TPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 285 LKNGVNDIKNHKWFATT 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 64/227 (28%)
Query: 42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---------GHSRSRV 92
T+ R+K LG G++ V ++ T YA+KI+DK + R+
Sbjct: 38 TAHLDQFERIK--TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 95
Query: 93 FKEV------ETFHHCQGHPNIIQLLEYYEDDENHERHKRIA------------------ 128
+ V + + + N+ ++EY E +RI
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 129 ---------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
+RDLKPEN+L DQ +++ DF +K T G
Sbjct: 156 EYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCG 201
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 202 TPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 64/227 (28%)
Query: 42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---------GHSRSRV 92
T+ R+K LG G++ V ++ T YA+KI+DK + R+
Sbjct: 37 TAHLDQFERIK--TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 93 FKEV------ETFHHCQGHPNIIQLLEYYEDDENHERHKRIA------------------ 128
+ V + + + N+ ++EY E +RI
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 129 ---------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
+RDLKPEN+L DQ +++ DF +K T G
Sbjct: 155 EYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCG 200
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 201 TPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 64/227 (28%)
Query: 42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---------GHSRSRV 92
T+ R+K LG G++ V ++ T YA+KI+DK + R+
Sbjct: 37 TAHLDQFERIK--TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 93 FKEV------ETFHHCQGHPNIIQLLEYYEDDENHERHKRIA------------------ 128
+ V + + + N+ ++EY E +RI
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 129 ---------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
+RDLKPEN+L DQ +++ DF +K T G
Sbjct: 155 EYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCG 200
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 201 TPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 167 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 216
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 217 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 260
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 261 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 304
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 305 LKNGVNDIKNHKWFATT 321
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 183 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 228
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 229 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 262
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LPNGVNDIKNHKWFATT 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 167 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 216
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 217 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 260
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 261 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 304
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 305 LKNGVNDIKNHKWFATT 321
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 183 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 228
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 229 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 262
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 64/227 (28%)
Query: 42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---------GHSRSRV 92
T+ R+K LG G++ V ++ T YA+KI+DK + R+
Sbjct: 37 TAHLDQFERIK--TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 93 FKEV------ETFHHCQGHPNIIQLLEYYEDDENHERHKRIA------------------ 128
+ V + + + N+ ++EY E +RI
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 154
Query: 129 ---------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
+RDLKPEN+L DQ +++ DF +K T G
Sbjct: 155 EYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCG 200
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 201 TPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 147 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 196
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 197 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 240
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 241 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 284
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 285 LKNGVNDIKNHKWFATT 301
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 163 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 208
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 209 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 242
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKDGVNDIKNHKWFATT 300
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 64/227 (28%)
Query: 42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---------GHSRSRV 92
T+ R+K LG G++ V ++ T YA+KI+DK + R+
Sbjct: 37 TAHLDQFERIK--TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 93 FKEV------ETFHHCQGHPNIIQLLEYYEDDENHERHKRIA------------------ 128
+ V + + + N+ ++EY E +RI
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 129 ---------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
+RDLKPEN+L DQ +++ DF +K T G
Sbjct: 155 EYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCG 200
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 201 TPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 64/227 (28%)
Query: 42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---------GHSRSRV 92
T+ R+K LG G++ V ++ T YA+KI+DK + R+
Sbjct: 37 TAHLDQFERIK--TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 93 FKEV------ETFHHCQGHPNIIQLLEYYEDDENHERHKRIA------------------ 128
+ V + + + N+ ++EY E +RI
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 129 ---------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
+RDLKPEN+L DQ +++ DF +K T G
Sbjct: 155 EYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCG 200
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 201 TPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKDGVNDIKNHKWFATT 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 92/227 (40%), Gaps = 64/227 (28%)
Query: 42 TSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLP---------GHSRSRV 92
T+ R+K LG G++ V ++ T YA+KI+DK + R+
Sbjct: 37 TAHLDQFERIK--TLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRI 94
Query: 93 FKEV------ETFHHCQGHPNIIQLLEYYEDDENHERHKRIA------------------ 128
+ V + + + N+ ++EY E +RI
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 154
Query: 129 ---------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
+RDLKPEN+L DQ +++ DF +K T G
Sbjct: 155 EYLHSLDLIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCG 200
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 201 TPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKDGVNDIKNHKWFATT 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKDGVNDIKNHKWFATT 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 139 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 188
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 189 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 232
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 233 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 276
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 277 LKNGVNDIKNHKWFATT 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 155 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 200
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 201 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 234
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 141 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 190
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 191 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 234
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 235 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 278
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 279 LKNGVNDIKNHKWFATT 295
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 157 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 202
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 203 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 236
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 95/220 (43%), Gaps = 61/220 (27%)
Query: 49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
YRL I GKG +A V+ +ILT E A+KIIDK L S ++F+EV HP
Sbjct: 14 YRLLKTI-GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK-ILNHP 71
Query: 107 NIIQLLEYYEDDEN-------------------HER---------------------HKR 126
NI++L E E ++ H R KR
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 131
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLK EN+L D +K+ DF G +V L T GS + AP
Sbjct: 132 IVHRDLKAENLLL---DADMNIKIADF----GFSNEFTVGGKLDTF-----CGSPPYAAP 179
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
E+ F G + G + D+WSLGV++Y L+ G PF G
Sbjct: 180 EL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQ 214
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 86/190 (45%), Gaps = 38/190 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
Q+ I HRDLK EN+L D +K+ DF G +V L T GS +
Sbjct: 129 QKRIVHRDLKAENLLL---DADMNIKIADF----GFSNEFTVGGKLDTF-----CGSPPY 176
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
APE+ F G + G + D+WSLGV++Y L+ G PF G ++
Sbjct: 177 AAPEL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE------------- 218
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
L + +G Y P +S + ++L++R LV + KR + ++K WI+
Sbjct: 219 --LRERVLRGKYRIP----FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEED 272
Query: 431 --RPLVTPQV 438
+P V P++
Sbjct: 273 ELKPFVEPEL 282
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 139 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 188
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 189 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 232
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 233 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 276
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 277 LKNGVNDIKNHKWFATT 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 155 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 200
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 201 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 234
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN++ DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLMI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN++ DQ +++ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLMI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 92/219 (42%), Gaps = 61/219 (27%)
Query: 49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
YRL I GKG +A V+ +ILT E AVKIIDK L S ++F+EV HP
Sbjct: 16 YRLLKTI-GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMK-VLNHP 73
Query: 107 NIIQLLEYYEDDEN-------------------HERHKR--------------------- 126
NI++L E E ++ H R K
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLK EN+L D +K+ DF + F + + P + AP
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDAFCGAP---------PYAAP 181
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
E+ F G + G + D+WSLGV++Y L+ G PF G
Sbjct: 182 EL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDG 215
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 82/188 (43%), Gaps = 38/188 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
Q+ I HRDLK EN+L D +K+ DF + F + + P +
Sbjct: 131 QKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDAFCGAP---------PY 178
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
APE+ F G + G + D+WSLGV++Y L+ G PF G ++
Sbjct: 179 AAPEL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE------------- 220
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA--GT 428
L + +G Y P +S + ++L+++ L+ + KR + ++K W++
Sbjct: 221 --LRERVLRGKYRIP----FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDD 274
Query: 429 AHRPLVTP 436
+P V P
Sbjct: 275 ELKPYVEP 282
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 86/196 (43%), Gaps = 50/196 (25%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD-- 241
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL--- 412
Q ++ I G FP S S + KDL+R LL D KR
Sbjct: 242 -----------EPIQ--IYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGNL 284
Query: 413 --SAASVLKHPWISTA 426
+ H W +T
Sbjct: 285 KNGVNDIKNHKWFATT 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 75.1 bits (183), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN++ DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLII---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEIIIS------KGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN++ DQ +++ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLII---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EIIIS------KGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 201
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN G
Sbjct: 202 SPELLT-----EKSA-XKSSDLWALGCIIYQLVAGLPPFRAGNEG--------------- 240
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 241 -LIFAKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++V + T EYA+KI++ K+P +R R
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 157 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYVSPELLT 207
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCG 228
E S K DLW+LG ++Y L+ G PPF GN G
Sbjct: 208 -----EKSA-XKSSDLWALGCIIYQLVAGLPPFRAGNEG 240
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 89/216 (41%), Gaps = 64/216 (29%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSR---SRVFKEVETFHHCQ-GHPNI 108
G +LGKG++A V +I T LE A+K+IDK + RV EV+ HCQ HP+I
Sbjct: 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKI--HCQLKHPSI 73
Query: 109 IQLLEYYED---------------------------DENHERH--------------KRI 127
++L Y+ED EN RH I
Sbjct: 74 LELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGI 133
Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
HRDL N+L +K+ DF L + +K H L G+ +++PE
Sbjct: 134 LHRDLTLSNLLLTRNMN---IKIADFGLATQLKMPHEKHYTLC--------GTPNYISPE 182
Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
I S + D+WSLG + Y LL G PPF
Sbjct: 183 IAT------RSAHGLESDVWSLGCMFYTLLIGRPPF 212
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 86/197 (43%), Gaps = 43/197 (21%)
Query: 233 WQRGETCHACQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK 287
+ E H +I+ HS GI HRDL N+L +K+ DF L + +K
Sbjct: 109 FSENEARHFMHQIITGMLYLHS--HGILHRDLTLSNLLLTRNMN---IKIADFGLATQLK 163
Query: 288 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
H L G+ +++PEI S + D+WSLG + Y LL G
Sbjct: 164 MPHEKHYTLC--------GTPNYISPEIATR------SAHGLESDVWSLGCMFYTLLIGR 209
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PPF + ++ + + Y+ P S +S EAKDLI +LL ++
Sbjct: 210 PPFDTDTVKNT---------------LNKVVLADYEMP----SFLSIEAKDLIHQLLRRN 250
Query: 408 ARKRLSAASVLKHPWIS 424
RLS +SVL HP++S
Sbjct: 251 PADRLSLSSVLDHPFMS 267
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 92/219 (42%), Gaps = 61/219 (27%)
Query: 49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
YRL I GKG +A V+ +ILT E AVKIIDK L S ++F+EV HP
Sbjct: 16 YRLLKTI-GKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVR-IXKVLNHP 73
Query: 107 NIIQLLEYYEDDEN-------------------HERHKR--------------------- 126
NI++L E E ++ H R K
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLK EN+L D +K+ DF + F + + P + AP
Sbjct: 134 IVHRDLKAENLLL---DADXNIKIADFGFSNEFTFGNKLDAFCGAP---------PYAAP 181
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
E+ F G + G + D+WSLGV++Y L+ G PF G
Sbjct: 182 EL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDG 215
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 79/188 (42%), Gaps = 38/188 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
Q+ I HRDLK EN+L D +K+ DF + F + + P +
Sbjct: 131 QKFIVHRDLKAENLLL---DADXNIKIADFGFSNEFTFGNKLDAFCGAP---------PY 178
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
APE+ F G + G + D+WSLGV++Y L+ G PF G ++
Sbjct: 179 AAPEL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE------------- 220
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA--GT 428
L + +G Y P S + ++L+++ L+ + KR + + K W +
Sbjct: 221 --LRERVLRGKYRIP----FYXSTDCENLLKKFLILNPSKRGTLEQIXKDRWXNVGHEDD 274
Query: 429 AHRPLVTP 436
+P V P
Sbjct: 275 ELKPYVEP 282
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANSF----VGTAQYV 201
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN +
Sbjct: 202 SPELLT-----EKSA-SKSSDLWALGCIIYQLVAGLPPFRAGN----------------E 239
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 240 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 59/214 (27%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNII 109
G+ILG+G++++V + T EYA+KI++K + + V +E + HP +
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLD-HPFFV 95
Query: 110 QLLEYYEDDEN----------------------------------------HERHKRIAH 129
+L ++DDE + K I H
Sbjct: 96 KLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIH 155
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RDLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 156 RDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANSF----VGTAQYVSPELL 206
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E S K DLW+LG ++Y L+ G PPF
Sbjct: 207 T-----EKSA-SKSSDLWALGCIIYQLVAGLPPF 234
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 87/197 (44%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L D+ +++ DF +K T
Sbjct: 133 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DEQGYIQVTDFGFAKRVKGRT----- 182
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 183 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 226
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 227 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 270
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 271 LKNGVNDIKNHKWFATT 287
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L D+ +++ DF +K T G+ E++AP
Sbjct: 149 LIYRDLKPENLLI---DEQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 194
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 195 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 228
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 92/219 (42%), Gaps = 61/219 (27%)
Query: 49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
YRL I GKG +A V+ +ILT E AV+IIDK L S ++F+EV HP
Sbjct: 16 YRLLKTI-GKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMK-VLNHP 73
Query: 107 NIIQLLEYYEDDEN-------------------HERHKR--------------------- 126
NI++L E E ++ H R K
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLK EN+L D +K+ DF + F + GS + AP
Sbjct: 134 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDEF---------CGSPPYAAP 181
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
E+ F G + G + D+WSLGV++Y L+ G PF G
Sbjct: 182 EL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDG 215
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 38/188 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
Q+ I HRDLK EN+L D +K+ DF + F + GS +
Sbjct: 131 QKFIVHRDLKAENLLL---DADMNIKIADFGFSNEFTFGNKLDEF---------CGSPPY 178
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
APE+ F G + G + D+WSLGV++Y L+ G PF G ++
Sbjct: 179 AAPEL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE------------- 220
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA--GT 428
L + +G Y P +S + ++L+++ L+ + KR + ++K W++
Sbjct: 221 --LRERVLRGKYRIP----FYMSTDCENLLKKFLILNPSKRGTLEQIMKDRWMNVGHEDD 274
Query: 429 AHRPLVTP 436
+P V P
Sbjct: 275 ELKPYVEP 282
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 86/197 (43%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E +APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEALAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 52/100 (52%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E +AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEALAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/219 (32%), Positives = 95/219 (43%), Gaps = 61/219 (27%)
Query: 49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
YRL+ I GKG +A V+ ++LT E AVKIIDK L S ++F+EV HP
Sbjct: 17 YRLQKTI-GKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMK-ILNHP 74
Query: 107 NIIQLLEYYEDDEN-------------------HER---------------------HKR 126
NI++L E E ++ H R K
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKY 134
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLK EN+L D +K+ DF G +V + L T GS + AP
Sbjct: 135 IVHRDLKAENLLL---DGDMNIKIADF----GFSNEFTVGNKLDTF-----CGSPPYAAP 182
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
E+ F G + G D+WSLGV++Y L+ G PF G
Sbjct: 183 EL---FQGKKYDG--PEVDVWSLGVILYTLVSGSLPFDG 216
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 17/102 (16%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
Q+ I HRDLK EN+L D +K+ DF G +V + L T GS +
Sbjct: 132 QKYIVHRDLKAENLLL---DGDMNIKIADF----GFSNEFTVGNKLDTF-----CGSPPY 179
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
APE+ F G + G D+WSLGV++Y L+ G PF G
Sbjct: 180 AAPEL---FQGKKYDG--PEVDVWSLGVILYTLVSGSLPFDG 216
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 201
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN G
Sbjct: 202 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEG--------------- 240
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 241 -LIFAKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 98/219 (44%), Gaps = 58/219 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++V + T EYA+KI++ K+P +R R
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 157 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYVSPELLT 207
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCG 228
E S K DLW+LG ++Y L+ G PPF GN G
Sbjct: 208 -----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGNEG 240
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 86/197 (43%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++AP I+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPAII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D KR
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 52/100 (52%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
I+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 AII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 148 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANSF----VGTAQYV 198
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN +
Sbjct: 199 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 236
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 237 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 274
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 57/213 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++V + T EYA+KI++ K+P +R R
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 94 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 154 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANSF----VGTAQYVSPELLT 204
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E S K DLW+LG ++Y L+ G PPF
Sbjct: 205 -----EKSAC-KSSDLWALGCIIYQLVAGLPPF 231
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 149 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANAF----VGTAQYV 199
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN +
Sbjct: 200 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 237
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 238 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 275
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 57/213 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++V + T EYA+KI++ K+P +R R
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 95 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 155 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANAF----VGTAQYVSPELLT 205
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E S K DLW+LG ++Y L+ G PPF
Sbjct: 206 -----EKSAC-KSSDLWALGCIIYQLVAGLPPF 232
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 152 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANSF----VGTAQYV 202
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN +
Sbjct: 203 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 240
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 241 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 278
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 57/213 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++V + T EYA+KI++ K+P +R R
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 98 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 158 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANSF----VGTAQYVSPELLT 208
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E S K DLW+LG ++Y L+ G PPF
Sbjct: 209 -----EKSAC-KSSDLWALGCIIYQLVAGLPPF 235
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 92/220 (41%), Gaps = 61/220 (27%)
Query: 49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK--LPGHSRSRVFKEVETFHHCQGHP 106
YRL I GKG +A V+ +ILT E A+KIIDK L S ++F+EV HP
Sbjct: 17 YRLLKTI-GKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMK-ILNHP 74
Query: 107 NIIQLLEYYEDDEN-------------------HER---------------------HKR 126
NI++L E E ++ H R KR
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLK EN+L D +K+ DF + + + P + AP
Sbjct: 135 IVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAFCGAP---------PYAAP 182
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
E+ F G + G + D+WSLGV++Y L+ G PF G
Sbjct: 183 EL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQ 217
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 38/190 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
Q+ I HRDLK EN+L D +K+ DF + + + P +
Sbjct: 132 QKRIVHRDLKAENLLL---DADMNIKIADFGFSNEFTVGGKLDAFCGAP---------PY 179
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
APE+ F G + G + D+WSLGV++Y L+ G PF G ++
Sbjct: 180 AAPEL---FQGKKYDGPE--VDVWSLGVILYTLVSGSLPFDGQNLKE------------- 221
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
L + +G Y P +S + ++L++R LV + KR + ++K WI+
Sbjct: 222 --LRERVLRGKYRIP----FYMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHEED 275
Query: 431 --RPLVTPQV 438
+P V P++
Sbjct: 276 ELKPFVEPEL 285
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 201
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN +
Sbjct: 202 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 239
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 240 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 57/213 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++V + T EYA+KI++ K+P +R R
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 157 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYVSPELLT 207
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E S K DLW+LG ++Y L+ G PPF
Sbjct: 208 -----EKSAC-KSSDLWALGCIIYQLVAGLPPF 234
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 149 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 199
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN +
Sbjct: 200 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 237
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 238 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 275
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 94/213 (44%), Gaps = 57/213 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++ + T EYA+KI++ K+P +R R
Sbjct: 35 GKILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 95 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 155 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYVSPELLT 205
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E S K DLW+LG ++Y L+ G PPF
Sbjct: 206 -----EKSAC-KSSDLWALGCIIYQLVAGLPPF 232
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 149 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 199
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN +
Sbjct: 200 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 237
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 238 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 275
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 57/213 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++V + T EYA+KI++ K+P +R R
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 95 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 155 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYVSPELLT 205
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E S K DLW+LG ++Y L+ G PPF
Sbjct: 206 -----EKSAC-KSSDLWALGCIIYQLVAGLPPF 232
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 86/197 (43%), Gaps = 52/197 (26%)
Query: 240 HACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+A Q +L HS+ + +RDLKPEN+L DQ +++ DF +K T
Sbjct: 146 YAAQIVLTFEYLHSLD--LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT----- 195
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ E++APEI+ + GY+K D W+LGV++Y + GYPPF+
Sbjct: 196 ------WXLCGTPEYLAPEII------LSKGYNKAVDWWALGVLIYEMAAGYPPFF---- 239
Query: 356 EDCGWQRGETCHACQEI-LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-- 412
A Q I ++ I G FP S S + KDL+R LL D K
Sbjct: 240 ------------ADQPIQIYEKIVSGKVRFP----SHFSSDLKDLLRNLLQVDLTKAFGN 283
Query: 413 ---SAASVLKHPWISTA 426
+ H W +T
Sbjct: 284 LKNGVNDIKNHKWFATT 300
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 53/100 (53%), Gaps = 20/100 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ +RDLKPEN+L DQ +++ DF +K T G+ E++AP
Sbjct: 162 LIYRDLKPENLLI---DQQGYIQVTDFGFAKRVKGRT-----------WXLCGTPEYLAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY+K D W+LGV++Y + GYPPF+ +
Sbjct: 208 EII------LSKGYNKAVDWWALGVLIYEMAAGYPPFFAD 241
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 149 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 199
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN +
Sbjct: 200 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 237
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 238 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 275
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 57/213 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++V + T EYA+KI++ K+P +R R
Sbjct: 35 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 94
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 95 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 154
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 155 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYVSPELLT 205
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E S K DLW+LG ++Y L+ G PPF
Sbjct: 206 -----EKSAC-KSSDLWALGCIIYQLVAGLPPF 232
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 201
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN +
Sbjct: 202 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 239
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 240 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 57/213 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++V + T EYA+KI++ K+P +R R
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 157 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYVSPELLT 207
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E S K DLW+LG ++Y L+ G PPF
Sbjct: 208 -----EKSAC-KSSDLWALGCIIYQLVAGLPPF 234
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 129 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 179
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN +
Sbjct: 180 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 217
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 218 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 255
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 57/213 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++V + T EYA+KI++ K+P +R R
Sbjct: 15 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 74
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 75 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 134
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 135 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYVSPELLT 185
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E S K DLW+LG ++Y L+ G PPF
Sbjct: 186 -----EKSAC-KSSDLWALGCIIYQLVAGLPPF 212
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 126 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 176
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN +
Sbjct: 177 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 214
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 215 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 252
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 57/213 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++V + T EYA+KI++ K+P +R R
Sbjct: 12 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 71
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 72 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 131
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 132 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYVSPELLT 182
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E S K DLW+LG ++Y L+ G PPF
Sbjct: 183 -----EKSAC-KSSDLWALGCIIYQLVAGLPPF 209
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 148 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 198
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN +
Sbjct: 199 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 236
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 237 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 274
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 57/213 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++V + T EYA+KI++ K+P +R R
Sbjct: 34 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 93
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 94 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 153
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 154 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYVSPELLT 204
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E S K DLW+LG ++Y L+ G PPF
Sbjct: 205 -----EKSAC-KSSDLWALGCIIYQLVAGLPPF 231
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 152 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 202
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN +
Sbjct: 203 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 240
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 241 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 278
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 57/213 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++V + T EYA+KI++ K+P +R R
Sbjct: 38 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 97
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 98 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 157
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 158 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYVSPELLT 208
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E S K DLW+LG ++Y L+ G PPF
Sbjct: 209 -----EKSAC-KSSDLWALGCIIYQLVAGLPPF 235
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 133 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 183
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN +
Sbjct: 184 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 221
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 222 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 259
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 57/213 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++V + T EYA+KI++ K+P +R R
Sbjct: 19 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 78
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 79 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 138
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 139 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYVSPELLT 189
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E S K DLW+LG ++Y L+ G PPF
Sbjct: 190 -----EKSAC-KSSDLWALGCIIYQLVAGLPPF 216
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 127 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 177
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN +
Sbjct: 178 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 215
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 216 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 253
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 57/213 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++V + T EYA+KI++ K+P +R R
Sbjct: 13 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 72
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 73 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 132
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 133 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYVSPELLT 183
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E S K DLW+LG ++Y L+ G PPF
Sbjct: 184 -----EKSAC-KSSDLWALGCIIYQLVAGLPPF 210
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 156 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 206
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN +
Sbjct: 207 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 244
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 245 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 282
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 57/213 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++V + T EYA+KI++ K+P +R R
Sbjct: 42 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 101
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 102 LYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 161
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 162 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYVSPELLT 212
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E S K DLW+LG ++Y L+ G PPF
Sbjct: 213 -----EKSAC-KSSDLWALGCIIYQLVAGLPPF 239
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 128 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 178
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN +
Sbjct: 179 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 216
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 217 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 254
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 57/213 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++V + T EYA+KI++ K+P +R R
Sbjct: 14 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 73
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 74 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 133
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 134 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYVSPELLT 184
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E S K DLW+LG ++Y L+ G PPF
Sbjct: 185 -----EKSAC-KSSDLWALGCIIYQLVAGLPPF 211
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 83/162 (51%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 151 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 201
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN +
Sbjct: 202 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 239
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFPE + +A+DL+ +LLV DA KRL
Sbjct: 240 YLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 57/213 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++V + T EYA+KI++ K+P +R R
Sbjct: 37 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 96
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 97 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 156
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 157 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYVSPELLT 207
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E S K DLW+LG ++Y L+ G PPF
Sbjct: 208 -----EKSAC-KSSDLWALGCIIYQLVAGLPPF 234
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 88/194 (45%), Gaps = 48/194 (24%)
Query: 236 GETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
E C A + + HS + I +RDLKPENIL D+ +K+ DF + P
Sbjct: 113 AEVCLALEYL--HS--KDIIYRDLKPENILL---DKNGHIKITDFGFAK--------YVP 157
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
T L G+ +++APE+V+ Y+K D WS G+++Y +L GY PFY +
Sbjct: 158 DVTYXL---CGTPDYIAPEVVST------KPYNKSIDWWSFGILIYEMLAGYTPFYDS-- 206
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL--- 412
T ++IL ++ FP +++ KDL+ RL+ +D +RL
Sbjct: 207 --------NTMKTYEKILNAELR-----FP----PFFNEDVKDLLSRLITRDLSQRLGNL 249
Query: 413 --SAASVLKHPWIS 424
V HPW
Sbjct: 250 QNGTEDVKNHPWFK 263
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 52/100 (52%), Gaps = 20/100 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K I +RDLKPENIL D+ +K+ DF + P T L G+ +++
Sbjct: 125 KDIIYRDLKPENILL---DKNGHIKITDFGFAK--------YVPDVTYXL---CGTPDYI 170
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
APE+V+ Y+K D WS G+++Y +L GY PFY
Sbjct: 171 APEVVST------KPYNKSIDWWSFGILIYEMLAGYTPFY 204
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 82/162 (50%), Gaps = 36/162 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI HRDLKPENIL ++ +++ DF G+ + A VG+A+++
Sbjct: 154 KGIIHRDLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYV 204
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY-GNCGEDCGWQRGETCHACQ 370
+PE++ E S K DLW+LG ++Y L+ G PPF GN +
Sbjct: 205 SPELLT-----EKSAC-KSSDLWALGCIIYQLVAGLPPFRAGN----------------E 242
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++F I + YDFP + +A+DL+ +LLV DA KRL
Sbjct: 243 YLIFQKIIKLEYDFP----AAFFPKARDLVEKLLVLDATKRL 280
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 57/213 (26%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIID--------KLPGHSRSR------------- 91
G+ILG+G++++V + T EYA+KI++ K+P +R R
Sbjct: 40 GKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVK 99
Query: 92 ---VFKEVETFHHCQGHPNIIQLLEYYED----DENHERH--------------KRIAHR 130
F++ E + + +LL+Y DE R K I HR
Sbjct: 100 LYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHR 159
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPENIL ++ +++ DF G+ + A VG+A++++PE++
Sbjct: 160 DLKPENILL---NEDMHIQITDF--GTAKVLSPESKQARANXF----VGTAQYVSPELLT 210
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E S K DLW+LG ++Y L+ G PPF
Sbjct: 211 -----EKSAC-KSSDLWALGCIIYQLVAGLPPF 237
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 86/175 (49%), Gaps = 33/175 (18%)
Query: 255 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF--NTSVHSPLATPLLLTPVGSAEFMA 312
HRD+KP+NIL D ++L DF GS +K + +V S +A VG+ ++++
Sbjct: 197 VHRDIKPDNILM---DMNGHIRLADF--GSCLKLMEDGTVQSSVA-------VGTPDYIS 244
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
PEI+ A G + Y CD WSLGV +Y +L G PFY +I
Sbjct: 245 PEILQAMEGGKGR-YGPECDWWSLGVCMYEMLYGETPFYAES----------LVETYGKI 293
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASV---LKHPWIS 424
+ H + + FP + + +S+ AKDLIRRL+ RL + KHP+ S
Sbjct: 294 MNH---KERFQFPT-QVTDVSENAKDLIRRLICS-REHRLGQNGIEDFKKHPFFS 343
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 97/219 (44%), Gaps = 62/219 (28%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRV--FKE------------VETF 99
+++G+GA+ V + +A+KI++K R+ F+E + T
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 100 HHC-QGHPNIIQLLEYY------------ED------------------DENHERHKRIA 128
H+ Q N+ +++YY ED D H+ H
Sbjct: 140 HYAFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLH--YV 197
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF--NTSVHSPLATPLLLTPVGSAEFMAP 186
HRD+KP+NIL D ++L DF GS +K + +V S +A VG+ ++++P
Sbjct: 198 HRDIKPDNILM---DMNGHIRLADF--GSCLKLMEDGTVQSSVA-------VGTPDYISP 245
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ A G + Y CD WSLGV +Y +L G PFY
Sbjct: 246 EILQAMEGGKGR-YGPECDWWSLGVCMYEMLYGETPFYA 283
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 40/177 (22%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ I HRDLKPEN+L D L+ VK+ DF L S I + + L T GS +
Sbjct: 126 RHKIVHRDLKPENLLL--DDNLN-VKIADFGL-SNIMTDGN--------FLKTSCGSPNY 173
Query: 311 MAPEIVNA--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
APE++N + GPE D+WS G+V+Y++L G PF +
Sbjct: 174 AAPEVINGKLYAGPE-------VDVWSCGIVLYVMLVGRLPFDDEFIPN----------- 215
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
LF + Y P+ +S A+ LIRR++V D +R++ + + PW +
Sbjct: 216 ----LFKKVNSCVYVMPD----FLSPGAQSLIRRMIVADPMQRITIQEIRRDPWFNV 264
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 95/215 (44%), Gaps = 66/215 (30%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNIIQ 110
E LG+G++ V+ + T+ + A+K I + RV +E+ ++ HP+II+
Sbjct: 15 ETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREI-SYLKLLRHPHIIK 73
Query: 111 L-------------LEY--------------YEDDENHE-------------RHKRIAHR 130
L +EY +DE RHK I HR
Sbjct: 74 LYDVITTPTDIVMVIEYAGGELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHK-IVHR 132
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
DLKPEN+L D L+ VK+ DF L S I + + L T GS + APE++N
Sbjct: 133 DLKPENLLL--DDNLN-VKIADFGL-SNIMTDGN--------FLKTSCGSPNYAAPEVIN 180
Query: 191 A--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ GPE D+WS G+V+Y++L G PF
Sbjct: 181 GKLYAGPE-------VDVWSCGIVLYVMLVGRLPF 208
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 35/195 (17%)
Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
Q C A + L QG+ HRD+K ++IL H + VKL DF G S
Sbjct: 248 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKE 300
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
P L VG+ +MAPE+++ GPE D+WSLG++V ++ G PP++
Sbjct: 301 VPRRKXL----VGTPYWMAPELISRLPYGPE-------VDIWSLGIMVIEMVDGEPPYFN 349
Query: 353 NCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
+ ++ L ++ H +S K + RLLV+D +R
Sbjct: 350 EPPL-------KAMKMIRDNLPPRLKNLH---------KVSPSLKGFLDRLLVRDPAQRA 393
Query: 413 SAASVLKHPWISTAG 427
+AA +LKHP+++ AG
Sbjct: 394 TAAELLKHPFLAKAG 408
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 19/99 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRD+K ++IL H + VKL DF G S P L VG+ +MAP
Sbjct: 268 VIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKEVPRRKXL----VGTPYWMAP 316
Query: 187 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
E+++ GPE D+WSLG++V ++ G PP++
Sbjct: 317 ELISRLPYGPE-------VDIWSLGIMVIEMVDGEPPYF 348
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 35/195 (17%)
Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
Q C A + L QG+ HRD+K ++IL H + VKL DF G S
Sbjct: 126 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKE 178
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
P L VG+ +MAPE+++ GPE D+WSLG++V ++ G PP++
Sbjct: 179 VPRRKXL----VGTPYWMAPELISRLPYGPE-------VDIWSLGIMVIEMVDGEPPYFN 227
Query: 353 NCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
+ ++ L ++ H +S K + RLLV+D +R
Sbjct: 228 EPPL-------KAMKMIRDNLPPRLKNLH---------KVSPSLKGFLDRLLVRDPAQRA 271
Query: 413 SAASVLKHPWISTAG 427
+AA +LKHP+++ AG
Sbjct: 272 TAAELLKHPFLAKAG 286
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 19/100 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRD+K ++IL H + VKL DF G S P L VG+ +MAP
Sbjct: 146 VIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKEVPRRKXL----VGTPYWMAP 194
Query: 187 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
E+++ GPE D+WSLG++V ++ G PP++
Sbjct: 195 ELISRLPYGPE-------VDIWSLGIMVIEMVDGEPPYFN 227
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 35/195 (17%)
Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
Q C A + L QG+ HRD+K ++IL H + VKL DF G S
Sbjct: 128 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKE 180
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
P L VG+ +MAPE+++ GPE D+WSLG++V ++ G PP++
Sbjct: 181 VPRRKXL----VGTPYWMAPELISRLPYGPE-------VDIWSLGIMVIEMVDGEPPYFN 229
Query: 353 NCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
+ ++ L ++ H +S K + RLLV+D +R
Sbjct: 230 EPPL-------KAMKMIRDNLPPRLKNLH---------KVSPSLKGFLDRLLVRDPAQRA 273
Query: 413 SAASVLKHPWISTAG 427
+AA +LKHP+++ AG
Sbjct: 274 TAAELLKHPFLAKAG 288
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 19/100 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRD+K ++IL H + VKL DF G S P L VG+ +MAP
Sbjct: 148 VIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKEVPRRKXL----VGTPYWMAP 196
Query: 187 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
E+++ GPE D+WSLG++V ++ G PP++
Sbjct: 197 ELISRLPYGPE-------VDIWSLGIMVIEMVDGEPPYFN 229
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 90/195 (46%), Gaps = 35/195 (17%)
Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
Q C A + L QG+ HRD+K ++IL H + VKL DF G S
Sbjct: 171 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKE 223
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
P L VG+ +MAPE+++ GPE D+WSLG++V ++ G PP++
Sbjct: 224 VPRRKXL----VGTPYWMAPELISRLPYGPE-------VDIWSLGIMVIEMVDGEPPYFN 272
Query: 353 NCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
+ ++ L ++ H +S K + RLLV+D +R
Sbjct: 273 EPPL-------KAMKMIRDNLPPRLKNLH---------KVSPSLKGFLDRLLVRDPAQRA 316
Query: 413 SAASVLKHPWISTAG 427
+AA +LKHP+++ AG
Sbjct: 317 TAAELLKHPFLAKAG 331
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 19/99 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRD+K ++IL H + VKL DF G S P L VG+ +MAP
Sbjct: 191 VIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKEVPRRKXL----VGTPYWMAP 239
Query: 187 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
E+++ GPE D+WSLG++V ++ G PP++
Sbjct: 240 ELISRLPYGPE-------VDIWSLGIMVIEMVDGEPPYF 271
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 38/212 (17%)
Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
Q C A + L QG+ HRD+K ++IL H + VKL DF G S
Sbjct: 117 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKE 169
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
P L VG+ +MAPE+++ GPE D+WSLG++V ++ G PP++
Sbjct: 170 VPRRKXL----VGTPYWMAPELISRLPYGPE-------VDIWSLGIMVIEMVDGEPPYFN 218
Query: 353 NCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
+ ++ L ++ H +S K + RLLV+D +R
Sbjct: 219 EPPL-------KAMKMIRDNLPPRLKNLH---------KVSPSLKGFLDRLLVRDPAQRA 262
Query: 413 SAASVLKHPWISTAGTAHRPLVTPQVIRRNQS 444
+AA +LKHP+++ AG P ++R+N++
Sbjct: 263 TAAELLKHPFLAKAGP---PASIVPLMRQNRT 291
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 19/100 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRD+K ++IL H + VKL DF G S P L VG+ +MAP
Sbjct: 137 VIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKEVPRRKXL----VGTPYWMAP 185
Query: 187 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
E+++ GPE D+WSLG++V ++ G PP++
Sbjct: 186 ELISRLPYGPE-------VDIWSLGIMVIEMVDGEPPYFN 218
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 98/212 (46%), Gaps = 38/212 (17%)
Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
Q C A + L QG+ HRD+K ++IL H + VKL DF G S
Sbjct: 121 QIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKE 173
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
P L VG+ +MAPE+++ GPE D+WSLG++V ++ G PP++
Sbjct: 174 VPRRKXL----VGTPYWMAPELISRLPYGPE-------VDIWSLGIMVIEMVDGEPPYFN 222
Query: 353 NCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
+ ++ L ++ H +S K + RLLV+D +R
Sbjct: 223 EPPL-------KAMKMIRDNLPPRLKNLH---------KVSPSLKGFLDRLLVRDPAQRA 266
Query: 413 SAASVLKHPWISTAGTAHRPLVTPQVIRRNQS 444
+AA +LKHP+++ AG P ++R+N++
Sbjct: 267 TAAELLKHPFLAKAGP---PASIVPLMRQNRT 295
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 19/100 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRD+K ++IL H + VKL DF G S P L VG+ +MAP
Sbjct: 141 VIHRDIKSDSILLTHDGR---VKLSDF----GFCAQVSKEVPRRKXL----VGTPYWMAP 189
Query: 187 EIVNAF-MGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
E+++ GPE D+WSLG++V ++ G PP++
Sbjct: 190 ELISRLPYGPE-------VDIWSLGIMVIEMVDGEPPYFN 222
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 29/158 (18%)
Query: 255 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT--SVHSPLATPLLLTPVGSAEFMA 312
HRD+KP+N+L D ++L DF GS +K N +V S +A VG+ ++++
Sbjct: 213 VHRDIKPDNVLL---DVNGHIRLADF--GSCLKMNDDGTVQSSVA-------VGTPDYIS 260
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
PEI+ A M Y CD WSLGV +Y +L G PFY +I
Sbjct: 261 PEILQA-MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES----------LVETYGKI 309
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARK 410
+ H + + FP + +S+EAKDLI+RL+ R+
Sbjct: 310 MNH---EERFQFP-SHVTDVSEEAKDLIQRLICSRERR 343
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 94/219 (42%), Gaps = 62/219 (28%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRV--FKE------------VETF 99
+++G+GA+ V TE YA+KI++K R+ F+E +
Sbjct: 96 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 155
Query: 100 HHCQGHPN-------------IIQLLEYYED------------------DENHERHKRIA 128
H+ N ++ LL +ED D H+ H
Sbjct: 156 HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH--YV 213
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT--SVHSPLATPLLLTPVGSAEFMAP 186
HRD+KP+N+L D ++L DF GS +K N +V S +A VG+ ++++P
Sbjct: 214 HRDIKPDNVLL---DVNGHIRLADF--GSCLKMNDDGTVQSSVA-------VGTPDYISP 261
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ A M Y CD WSLGV +Y +L G PFY
Sbjct: 262 EILQA-MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 299
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 79/158 (50%), Gaps = 29/158 (18%)
Query: 255 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT--SVHSPLATPLLLTPVGSAEFMA 312
HRD+KP+N+L D ++L DF GS +K N +V S +A VG+ ++++
Sbjct: 197 VHRDIKPDNVLL---DVNGHIRLADF--GSCLKMNDDGTVQSSVA-------VGTPDYIS 244
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
PEI+ A M Y CD WSLGV +Y +L G PFY +I
Sbjct: 245 PEILQA-MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAES----------LVETYGKI 293
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARK 410
+ H + + FP + +S+EAKDLI+RL+ R+
Sbjct: 294 MNH---EERFQFP-SHVTDVSEEAKDLIQRLICSRERR 327
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 94/219 (42%), Gaps = 62/219 (28%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRV--FKE------------VETF 99
+++G+GA+ V TE YA+KI++K R+ F+E +
Sbjct: 80 KVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITAL 139
Query: 100 HHCQGHPN-------------IIQLLEYYED------------------DENHERHKRIA 128
H+ N ++ LL +ED D H+ H
Sbjct: 140 HYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLH--YV 197
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNT--SVHSPLATPLLLTPVGSAEFMAP 186
HRD+KP+N+L D ++L DF GS +K N +V S +A VG+ ++++P
Sbjct: 198 HRDIKPDNVLL---DVNGHIRLADF--GSCLKMNDDGTVQSSVA-------VGTPDYISP 245
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ A M Y CD WSLGV +Y +L G PFY
Sbjct: 246 EILQA-MEDGMGKYGPECDWWSLGVCMYEMLYGETPFYA 283
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 38/167 (22%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
++ + +RDLK EN++ D+ +K+ DF L GIK ++ + TP E
Sbjct: 270 EKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTP---------E 317
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
++APE++ E + Y + D W LGVV+Y ++CG PFY +
Sbjct: 318 YLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY---------------NQD 356
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
E LF I FP T+ EAK L+ LL KD ++RL S
Sbjct: 357 HEKLFELILMEEIRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGS 399
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 28/140 (20%)
Query: 88 SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSP 147
SR RVF E + I+ L+Y ++N + +RDLK EN++ D+
Sbjct: 243 SRERVFSEDRARFYG---AEIVSALDYLHSEKN------VVYRDLKLENLML---DKDGH 290
Query: 148 VKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL 206
+K+ DF L GIK ++ + TP E++APE++ E + Y + D
Sbjct: 291 IKITDFGLCKEGIKDGATMKTFCGTP---------EYLAPEVL------EDNDYGRAVDW 335
Query: 207 WSLGVVVYILLCGYPPFYGN 226
W LGVV+Y ++CG PFY
Sbjct: 336 WGLGVVMYEMMCGRLPFYNQ 355
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 78/167 (46%), Gaps = 38/167 (22%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
++ + +RDLK EN++ D+ +K+ DF L GIK ++ + TP E
Sbjct: 267 EKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKTFCGTP---------E 314
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
++APE++ E + Y + D W LGVV+Y ++CG PFY +
Sbjct: 315 YLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY---------------NQD 353
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
E LF I FP T+ EAK L+ LL KD ++RL S
Sbjct: 354 HEKLFELILMEEIRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGS 396
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 28/140 (20%)
Query: 88 SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSP 147
SR RVF E + I+ L+Y ++N + +RDLK EN++ D+
Sbjct: 240 SRERVFSEDRARFYG---AEIVSALDYLHSEKN------VVYRDLKLENLML---DKDGH 287
Query: 148 VKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL 206
+K+ DF L GIK ++ + TP E++APE++ E + Y + D
Sbjct: 288 IKITDFGLCKEGIKDGATMKTFCGTP---------EYLAPEVL------EDNDYGRAVDW 332
Query: 207 WSLGVVVYILLCGYPPFYGN 226
W LGVV+Y ++CG PFY
Sbjct: 333 WGLGVVMYEMMCGRLPFYNQ 352
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 40/177 (22%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ I HRDLKPEN+L D+ VK+ DF L S I + + L T GS +
Sbjct: 130 RHKIVHRDLKPENLLL---DEHLNVKIADFGL-SNIMTDGN--------FLKTSCGSPNY 177
Query: 311 MAPEIVNA--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
APE+++ + GPE D+WS GV++Y++LC PF +D
Sbjct: 178 AAPEVISGKLYAGPE-------VDVWSCGVILYVMLCRRLPF-----DD----------E 215
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
+LF +I G Y P+ +S A LI+R+L+ + R+S +++ W
Sbjct: 216 SIPVLFKNISNGVYTLPK----FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 268
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 64/212 (30%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQL- 111
LG+G++ V+ + T + A+KII+K + R+ +E+ ++ HP+II+L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREI-SYLRLLRHPHIIKLY 79
Query: 112 ------------LEY---------YEDDENHERHKR-----------------IAHRDLK 133
+EY + D+ E+ R I HRDLK
Sbjct: 80 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 139
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA-- 191
PEN+L D+ VK+ DF L S I + + L T GS + APE+++
Sbjct: 140 PENLLL---DEHLNVKIADFGL-SNIMTDGN--------FLKTSCGSPNYAAPEVISGKL 187
Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ GPE D+WS GV++Y++LC PF
Sbjct: 188 YAGPE-------VDVWSCGVILYVMLCRRLPF 212
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 40/177 (22%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ I HRDLKPEN+L D+ VK+ DF L S I + + L T GS +
Sbjct: 131 RHKIVHRDLKPENLLL---DEHLNVKIADFGL-SNIMTDGN--------FLKTSCGSPNY 178
Query: 311 MAPEIVNA--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
APE+++ + GPE D+WS GV++Y++LC PF +D
Sbjct: 179 AAPEVISGKLYAGPE-------VDVWSCGVILYVMLCRRLPF-----DD----------E 216
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
+LF +I G Y P+ +S A LI+R+L+ + R+S +++ W
Sbjct: 217 SIPVLFKNISNGVYTLPK----FLSPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 269
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 64/212 (30%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQL- 111
LG+G++ V+ + T + A+KII+K + R+ +E+ ++ HP+II+L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREI-SYLRLLRHPHIIKLY 80
Query: 112 ------------LEY---------YEDDENHERHKR-----------------IAHRDLK 133
+EY + D+ E+ R I HRDLK
Sbjct: 81 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 140
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA-- 191
PEN+L D+ VK+ DF L S I + + L T GS + APE+++
Sbjct: 141 PENLLL---DEHLNVKIADFGL-SNIMTDGN--------FLKTSCGSPNYAAPEVISGKL 188
Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ GPE D+WS GV++Y++LC PF
Sbjct: 189 YAGPE-------VDVWSCGVILYVMLCRRLPF 213
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 48/213 (22%)
Query: 223 FYGNCGEDCGWQRGETCHACQEILFHSI--------QQGIAHRDLKPENILCVHPDQLSP 274
+ GN D QR + F I + I HRDLKPEN+L D+
Sbjct: 85 YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLN 141
Query: 275 VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA--FMGPEASGYDKRCD 332
VK+ DF L S I + + L T GS + APE+++ + GPE D
Sbjct: 142 VKIADFGL-SNIMTDGN--------FLKTSCGSPNYAAPEVISGKLYAGPE-------VD 185
Query: 333 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTI 392
+WS GV++Y++LC PF +D +LF +I G Y P+ +
Sbjct: 186 VWSCGVILYVMLCRRLPF-----DD----------ESIPVLFKNISNGVYTLPK----FL 226
Query: 393 SDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
S A LI+R+L+ + R+S +++ W
Sbjct: 227 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 259
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 64/212 (30%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQL- 111
LG+G++ V+ + T + A+KII+K + R+ +E+ ++ HP+II+L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREI-SYLRLLRHPHIIKLY 70
Query: 112 ------------LEY---------YEDDENHERHKR-----------------IAHRDLK 133
+EY + D+ E+ R I HRDLK
Sbjct: 71 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 130
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA-- 191
PEN+L D+ VK+ DF L S I + + L T GS + APE+++
Sbjct: 131 PENLLL---DEHLNVKIADFGL-SNIMTDGN--------FLKTSCGSPNYAAPEVISGKL 178
Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ GPE D+WS GV++Y++LC PF
Sbjct: 179 YAGPE-------VDVWSCGVILYVMLCRRLPF 203
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 92/213 (43%), Gaps = 48/213 (22%)
Query: 223 FYGNCGEDCGWQRGETCHACQEILFHSI--------QQGIAHRDLKPENILCVHPDQLSP 274
+ GN D QR + F I + I HRDLKPEN+L D+
Sbjct: 89 YAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLL---DEHLN 145
Query: 275 VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA--FMGPEASGYDKRCD 332
VK+ DF L S I + + L T GS + APE+++ + GPE D
Sbjct: 146 VKIADFGL-SNIMTDGN--------FLKTSCGSPNYAAPEVISGKLYAGPE-------VD 189
Query: 333 LWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTI 392
+WS GV++Y++LC PF +D +LF +I G Y P+ +
Sbjct: 190 VWSCGVILYVMLCRRLPF-----DD----------ESIPVLFKNISNGVYTLPK----FL 230
Query: 393 SDEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
S A LI+R+L+ + R+S +++ W
Sbjct: 231 SPGAAGLIKRMLIVNPLNRISIHEIMQDDWFKV 263
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 95/212 (44%), Gaps = 64/212 (30%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQL- 111
LG+G++ V+ + T + A+KII+K + R+ +E+ ++ HP+II+L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREI-SYLRLLRHPHIIKLY 74
Query: 112 ------------LEY---------YEDDENHERHKR-----------------IAHRDLK 133
+EY + D+ E+ R I HRDLK
Sbjct: 75 DVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLK 134
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA-- 191
PEN+L D+ VK+ DF L S I + + L T GS + APE+++
Sbjct: 135 PENLLL---DEHLNVKIADFGL-SNIMTDGN--------FLKTSCGSPNYAAPEVISGKL 182
Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ GPE D+WS GV++Y++LC PF
Sbjct: 183 YAGPE-------VDVWSCGVILYVMLCRRLPF 207
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
++ + +RDLK EN++ D+ +K+ DF L GIK ++ TP E
Sbjct: 129 EKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTP---------E 176
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
++APE++ E + Y + D W LGVV+Y ++CG PFY
Sbjct: 177 YLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---------------D 215
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
E LF I FP T+ EAK L+ LL KD ++RL S
Sbjct: 216 HEKLFELILMEEIRFP----RTLGPEAKSLLSGLLKKDPKQRLGGGS 258
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 68/143 (47%), Gaps = 28/143 (19%)
Query: 88 SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSP 147
SR RVF E + I+ L+Y ++N + +RDLK EN++ D+
Sbjct: 102 SRERVFSEDRARFYG---AEIVSALDYLHSEKN------VVYRDLKLENLML---DKDGH 149
Query: 148 VKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL 206
+K+ DF L GIK ++ TP E++APE++ E + Y + D
Sbjct: 150 IKITDFGLCKEGIKDGATMKXFCGTP---------EYLAPEVL------EDNDYGRAVDW 194
Query: 207 WSLGVVVYILLCGYPPFYGNCGE 229
W LGVV+Y ++CG PFY E
Sbjct: 195 WGLGVVMYEMMCGRLPFYNQDHE 217
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
++ + +RDLK EN++ D+ +K+ DF L GIK ++ TP E
Sbjct: 128 EKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTP---------E 175
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
++APE++ E + Y + D W LGVV+Y ++CG PFY
Sbjct: 176 YLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---------------D 214
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
E LF I FP T+ EAK L+ LL KD ++RL S
Sbjct: 215 HEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQRLGGGS 257
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 28/140 (20%)
Query: 88 SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSP 147
SR RVF E + I+ L+Y ++N + +RDLK EN++ D+
Sbjct: 101 SRERVFSEDRARFYG---AEIVSALDYLHSEKN------VVYRDLKLENLML---DKDGH 148
Query: 148 VKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL 206
+K+ DF L GIK ++ TP E++APE++ E + Y + D
Sbjct: 149 IKITDFGLCKEGIKDGATMKXFCGTP---------EYLAPEVL------EDNDYGRAVDW 193
Query: 207 WSLGVVVYILLCGYPPFYGN 226
W LGVV+Y ++CG PFY
Sbjct: 194 WGLGVVMYEMMCGRLPFYNQ 213
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 76/167 (45%), Gaps = 38/167 (22%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
++ + +RDLK EN++ D+ +K+ DF L GIK ++ TP E
Sbjct: 127 EKNVVYRDLKLENLML---DKDGHIKITDFGLCKEGIKDGATMKXFCGTP---------E 174
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
++APE++ E + Y + D W LGVV+Y ++CG PFY
Sbjct: 175 YLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---------------D 213
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
E LF I FP T+ EAK L+ LL KD ++RL S
Sbjct: 214 HEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQRLGGGS 256
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 28/140 (20%)
Query: 88 SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSP 147
SR RVF E + I+ L+Y ++N + +RDLK EN++ D+
Sbjct: 100 SRERVFSEDRARFYG---AEIVSALDYLHSEKN------VVYRDLKLENLML---DKDGH 147
Query: 148 VKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL 206
+K+ DF L GIK ++ TP E++APE++ E + Y + D
Sbjct: 148 IKITDFGLCKEGIKDGATMKXFCGTP---------EYLAPEVL------EDNDYGRAVDW 192
Query: 207 WSLGVVVYILLCGYPPFYGN 226
W LGVV+Y ++CG PFY
Sbjct: 193 WGLGVVMYEMMCGRLPFYNQ 212
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 33/176 (18%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLA 297
ACQ + F S Q GI HRD+KP NI+ + VK+ DF + I SV A
Sbjct: 123 ADACQALNF-SHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 298 TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
+G+A++++PE D R D++SLG V+Y +L G PPF G+ +
Sbjct: 179 V------IGTAQYLSPEQA------RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDS 226
Query: 358 CGWQ-----------RGETCHA-CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
+Q R E A ++ ++ + PE + T ++ DL+R
Sbjct: 227 VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN----PENRYQTAAEMRADLVR 278
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 54/116 (46%), Gaps = 16/116 (13%)
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATPLLLTPV 178
N I HRD+KP NI+ + VK+ DF + I SV A +
Sbjct: 130 NFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAV------I 180
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 234
G+A++++PE D R D++SLG V+Y +L G PPF G+ + +Q
Sbjct: 181 GTAQYLSPEQA------RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPDSVAYQ 230
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 61/220 (27%)
Query: 51 LKGEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPN 107
++G LGKG +A ++ T+ +A K++ K L H + ++ E+ H +P+
Sbjct: 45 MRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI-AIHKSLDNPH 103
Query: 108 IIQLLEYYEDD----------------ENHERHK------------------------RI 127
++ ++EDD E H+R K R+
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 163
Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
HRDLK N+ D + VK+ DF L + I+F+ L G+ ++APE
Sbjct: 164 IHRDLKLGNLFL--NDDMD-VKIGDFGLATKIEFDGERKKTLC--------GTPNYIAPE 212
Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
++ G+ D+WSLG ++Y LL G PPF +C
Sbjct: 213 VLCK------KGHSFEVDIWSLGCILYTLLVGKPPFETSC 246
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 36/178 (20%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRDLK N+ D + VK+ DF L + I+F+ L G+ ++AP
Sbjct: 163 VIHRDLKLGNLFL--NDDMD-VKIGDFGLATKIEFDGERKKTLC--------GTPNYIAP 211
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ G+ D+WSLG ++Y LL G PPF +C ++
Sbjct: 212 EVLCK------KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--------------- 250
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
+ I++ Y P I+ A LIRR+L D R S A +L + ++ R
Sbjct: 251 YIRIKKNEYSVPRH----INPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMR 304
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 61/220 (27%)
Query: 51 LKGEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPN 107
++G LGKG +A ++ T+ +A K++ K L H + ++ E+ H +P+
Sbjct: 45 MRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI-AIHKSLDNPH 103
Query: 108 IIQLLEYYEDD----------------ENHERHK------------------------RI 127
++ ++EDD E H+R K R+
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 163
Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
HRDLK N+ D + VK+ DF L + I+F+ L G+ ++APE
Sbjct: 164 IHRDLKLGNLFL--NDDMD-VKIGDFGLATKIEFDGERKKXLC--------GTPNYIAPE 212
Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
++ G+ D+WSLG ++Y LL G PPF +C
Sbjct: 213 VLCK------KGHSFEVDIWSLGCILYTLLVGKPPFETSC 246
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 36/178 (20%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRDLK N+ D + VK+ DF L + I+F+ L G+ ++AP
Sbjct: 163 VIHRDLKLGNLFL--NDDMD-VKIGDFGLATKIEFDGERKKXLC--------GTPNYIAP 211
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ G+ D+WSLG ++Y LL G PPF +C ++
Sbjct: 212 EVLCK------KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--------------- 250
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
+ I++ Y P I+ A LIRR+L D R S A +L + ++ R
Sbjct: 251 YIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMR 304
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 61/220 (27%)
Query: 51 LKGEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPN 107
++G LGKG +A ++ T+ +A K++ K L H + ++ E+ H +P+
Sbjct: 45 MRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI-AIHKSLDNPH 103
Query: 108 IIQLLEYYEDD----------------ENHERHK------------------------RI 127
++ ++EDD E H+R K R+
Sbjct: 104 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 163
Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
HRDLK N+ D + VK+ DF L + I+F+ L G+ ++APE
Sbjct: 164 IHRDLKLGNLFL--NDDMD-VKIGDFGLATKIEFDGERKKDLC--------GTPNYIAPE 212
Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
++ G+ D+WSLG ++Y LL G PPF +C
Sbjct: 213 VLCK------KGHSFEVDIWSLGCILYTLLVGKPPFETSC 246
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 36/178 (20%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRDLK N+ D + VK+ DF L + I+F+ L G+ ++AP
Sbjct: 163 VIHRDLKLGNLFL--NDDMD-VKIGDFGLATKIEFDGERKKDLC--------GTPNYIAP 211
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ G+ D+WSLG ++Y LL G PPF +C ++
Sbjct: 212 EVLCK------KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--------------- 250
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
+ I++ Y P I+ A LIRR+L D R S A +L + ++ R
Sbjct: 251 YIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMR 304
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 79/167 (47%), Gaps = 29/167 (17%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
L H + GI +RD+K ENIL D V L DF L + T
Sbjct: 172 LEHLHKLGIIYRDIKLENILL---DSNGHVVLTDFGLSKEFVAD-------ETERAYDFC 221
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
G+ E+MAP+IV SG+DK D WSLGV++Y LL G PF + ++
Sbjct: 222 GTIEYMAPDIVRG----GDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKN-------- 269
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
Q + I + +P+ +S AKDLI+RLL+KD +KRL
Sbjct: 270 ---SQAEISRRILKSEPPYPQ----EMSALAKDLIQRLLMKDPKKRL 309
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 47/97 (48%), Gaps = 14/97 (14%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I +RD+K ENIL D V L DF L + T G+ E+MAP
Sbjct: 180 IIYRDIKLENILL---DSNGHVVLTDFGLSKEFVAD-------ETERAYDFCGTIEYMAP 229
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+IV SG+DK D WSLGV++Y LL G PF
Sbjct: 230 DIVRG----GDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 93/220 (42%), Gaps = 61/220 (27%)
Query: 51 LKGEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPN 107
++G LGKG +A ++ T+ +A K++ K L H + ++ E+ H +P+
Sbjct: 29 MRGRFLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEI-AIHKSLDNPH 87
Query: 108 IIQLLEYYEDD----------------ENHERHK------------------------RI 127
++ ++EDD E H+R K R+
Sbjct: 88 VVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRV 147
Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
HRDLK N+ D + VK+ DF L + I+F+ L G+ ++APE
Sbjct: 148 IHRDLKLGNLFL--NDDMD-VKIGDFGLATKIEFDGERKKDLC--------GTPNYIAPE 196
Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
++ G+ D+WSLG ++Y LL G PPF +C
Sbjct: 197 VLCK------KGHSFEVDIWSLGCILYTLLVGKPPFETSC 230
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 77/178 (43%), Gaps = 36/178 (20%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRDLK N+ D + VK+ DF L + I+F+ L G+ ++AP
Sbjct: 147 VIHRDLKLGNLFL--NDDMD-VKIGDFGLATKIEFDGERKKDLC--------GTPNYIAP 195
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E++ G+ D+WSLG ++Y LL G PPF +C ++
Sbjct: 196 EVLCK------KGHSFEVDIWSLGCILYTLLVGKPPFETSCLKET--------------- 234
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
+ I++ Y P I+ A LIRR+L D R S A +L + ++ R
Sbjct: 235 YIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELLTDEFFTSGYAPMR 288
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 78/176 (44%), Gaps = 33/176 (18%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLA 297
ACQ + F S Q GI HRD+KP NIL + VK+ DF + I SV A
Sbjct: 123 ADACQALNF-SHQNGIIHRDVKPANILI---SATNAVKVVDFGIARAIADSGNSVXQTAA 178
Query: 298 TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
+G+A++++PE D R D++SLG V+Y +L G PPF G+
Sbjct: 179 V------IGTAQYLSPEQA------RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
Query: 358 CGWQ-----------RGETCHA-CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
+Q R E A ++ ++ + PE + T ++ DL+R
Sbjct: 227 VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN----PENRYQTAAEMRADLVR 278
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 53/116 (45%), Gaps = 16/116 (13%)
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATPLLLTPV 178
N I HRD+KP NIL + VK+ DF + I SV A +
Sbjct: 130 NFSHQNGIIHRDVKPANILI---SATNAVKVVDFGIARAIADSGNSVXQTAAV------I 180
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 234
G+A++++PE D R D++SLG V+Y +L G PPF G+ +Q
Sbjct: 181 GTAQYLSPEQA------RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 45/202 (22%)
Query: 229 EDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF 288
ED + E A + HS+ GI +RDLKPENIL D+ +KL DF G+
Sbjct: 126 EDVKFYLAELALALDHL--HSL--GIIYRDLKPENILL---DEEGHIKLTDF----GLSK 174
Query: 289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
+ H A G+ E+MAPE+VN G+ + D WS GV+++ +L G
Sbjct: 175 ESIDHEKKAYSF----CGTVEYMAPEVVNR------RGHTQSADWWSFGVLMFEMLTGTL 224
Query: 349 PFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDA 408
PF G R ET I + P+ +S EA+ L+R L ++
Sbjct: 225 PFQGK-------DRKETMTM--------ILKAKLGMPQ----FLSPEAQSLLRMLFKRNP 265
Query: 409 RKRLSAA-----SVLKHPWIST 425
RL A + +H + ST
Sbjct: 266 ANRLGAGPDGVEEIKRHSFFST 287
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I +RDLKPENIL D+ +KL DF G+ + H A G+ E+MAP
Sbjct: 147 IIYRDLKPENILL---DEEGHIKLTDF----GLSKESIDHEKKAYSF----CGTVEYMAP 195
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
E+VN G+ + D WS GV+++ +L G PF G
Sbjct: 196 EVVNR------RGHTQSADWWSFGVLMFEMLTGTLPFQGK 229
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 45/202 (22%)
Query: 229 EDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF 288
ED + E A + HS+ GI +RDLKPENIL D+ +KL DF G+
Sbjct: 127 EDVKFYLAELALALDHL--HSL--GIIYRDLKPENILL---DEEGHIKLTDF----GLSK 175
Query: 289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
+ H A G+ E+MAPE+VN G+ + D WS GV+++ +L G
Sbjct: 176 ESIDHEKKAYSF----CGTVEYMAPEVVNR------RGHTQSADWWSFGVLMFEMLTGTL 225
Query: 349 PFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDA 408
PF G R ET I + P+ +S EA+ L+R L ++
Sbjct: 226 PFQGK-------DRKETMTM--------ILKAKLGMPQ----FLSPEAQSLLRMLFKRNP 266
Query: 409 RKRLSAA-----SVLKHPWIST 425
RL A + +H + ST
Sbjct: 267 ANRLGAGPDGVEEIKRHSFFST 288
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I +RDLKPENIL D+ +KL DF G+ + H A G+ E+MAP
Sbjct: 148 IIYRDLKPENILL---DEEGHIKLTDF----GLSKESIDHEKKAYSF----CGTVEYMAP 196
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
E+VN G+ + D WS GV+++ +L G PF G
Sbjct: 197 EVVNR------RGHTQSADWWSFGVLMFEMLTGTLPFQGK 230
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 88/202 (43%), Gaps = 45/202 (22%)
Query: 229 EDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF 288
ED + E A + HS+ GI +RDLKPENIL D+ +KL DF G+
Sbjct: 126 EDVKFYLAELALALDHL--HSL--GIIYRDLKPENILL---DEEGHIKLTDF----GLSK 174
Query: 289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
+ H A G+ E+MAPE+VN G+ + D WS GV+++ +L G
Sbjct: 175 ESIDHEKKAYSF----CGTVEYMAPEVVNR------RGHTQSADWWSFGVLMFEMLTGTL 224
Query: 349 PFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDA 408
PF G R ET I + P+ +S EA+ L+R L ++
Sbjct: 225 PFQGK-------DRKETMTM--------ILKAKLGMPQ----FLSPEAQSLLRMLFKRNP 265
Query: 409 RKRLSAA-----SVLKHPWIST 425
RL A + +H + ST
Sbjct: 266 ANRLGAGPDGVEEIKRHSFFST 287
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I +RDLKPENIL D+ +KL DF G+ + H A G+ E+MAP
Sbjct: 147 IIYRDLKPENILL---DEEGHIKLTDF----GLSKESIDHEKKAYSF----CGTVEYMAP 195
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
E+VN G+ + D WS GV+++ +L G PF G
Sbjct: 196 EVVNR------RGHTQSADWWSFGVLMFEMLTGTLPFQGK 229
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 33/174 (18%)
Query: 241 ACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATP 299
ACQ + F S Q GI HRD+KP NI+ + VK+ DF + I SV A
Sbjct: 125 ACQALNF-SHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAV- 179
Query: 300 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG 359
+G+A++++PE D R D++SLG V+Y +L G PPF G+
Sbjct: 180 -----IGTAQYLSPEQA------RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA 228
Query: 360 WQ-----------RGETCHA-CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
+Q R E A ++ ++ + PE + T ++ DL+R
Sbjct: 229 YQHVREDPIPPSARHEGLSADLDAVVLKALAKN----PENRYQTAAEMRADLVR 278
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 16/116 (13%)
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATPLLLTPV 178
N I HRD+KP NI+ + VK+ DF + I SV A +
Sbjct: 130 NFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAV------I 180
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 234
G+A++++PE D R D++SLG V+Y +L G PPF G+ +Q
Sbjct: 181 GTAQYLSPEQA------RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 33/176 (18%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLA 297
ACQ + F S Q GI HRD+KP NI+ + VK+ DF + I SV A
Sbjct: 123 ADACQALNF-SHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAA 178
Query: 298 TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
+G+A++++PE D R D++SLG V+Y +L G PPF G+
Sbjct: 179 V------IGTAQYLSPEQA------RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 226
Query: 358 CGWQ-----------RGETCHA-CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
+Q R E A ++ ++ + PE + T ++ DL+R
Sbjct: 227 VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN----PENRYQTAAEMRADLVR 278
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 16/116 (13%)
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATPLLLTPV 178
N I HRD+KP NI+ + VK+ DF + I SV A +
Sbjct: 130 NFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAV------I 180
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 234
G+A++++PE D R D++SLG V+Y +L G PPF G+ +Q
Sbjct: 181 GTAQYLSPEQA------RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 78/174 (44%), Gaps = 33/174 (18%)
Query: 241 ACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATP 299
ACQ + F S Q GI HRD+KP NI+ + VK+ DF + I SV A
Sbjct: 125 ACQALNF-SHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAV- 179
Query: 300 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG 359
+G+A++++PE D R D++SLG V+Y +L G PPF G+
Sbjct: 180 -----IGTAQYLSPEQA------RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVA 228
Query: 360 WQ-----------RGETCHA-CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
+Q R E A ++ ++ + PE + T ++ DL+R
Sbjct: 229 YQHVREDPIPPSARHEGLSADLDAVVLKALAKN----PENRYQTAAEMRADLVR 278
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 53/116 (45%), Gaps = 16/116 (13%)
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATPLLLTPV 178
N I HRD+KP NI+ + VK+ DF + I SV A +
Sbjct: 130 NFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAV------I 180
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 234
G+A++++PE D R D++SLG V+Y +L G PPF G+ +Q
Sbjct: 181 GTAQYLSPEQA------RGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 230
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 81/176 (46%), Gaps = 37/176 (21%)
Query: 241 ACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATP 299
ACQ + F S Q GI HRD+KP NI+ + VK+ DF + I SV A
Sbjct: 142 ACQALNF-SHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAV- 196
Query: 300 LLLTPVGSAEFMAPEIVNAFMGPEASG--YDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
+G+A++++PE +A G D R D++SLG V+Y +L G PPF G+
Sbjct: 197 -----IGTAQYLSPE--------QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 243
Query: 358 CGWQ-----------RGETCHA-CQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
+Q R E A ++ ++ + PE + T ++ DL+R
Sbjct: 244 VAYQHVREDPIPPSARHEGLSADLDAVVLKALAKN----PENRYQTAAEMRADLVR 295
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 56/118 (47%), Gaps = 20/118 (16%)
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI-KFNTSVHSPLATPLLLTPV 178
N I HRD+KP NI+ + VK+ DF + I SV A +
Sbjct: 147 NFSHQNGIIHRDVKPANIMI---SATNAVKVMDFGIARAIADSGNSVTQTAAV------I 197
Query: 179 GSAEFMAPEIVNAFMGPEASG--YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 234
G+A++++PE +A G D R D++SLG V+Y +L G PPF G+ +Q
Sbjct: 198 GTAQYLSPE--------QARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQ 247
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 49/209 (23%)
Query: 236 GETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+ H C E + + HRD+KPEN+L + +L K+ DF SVH+P
Sbjct: 125 ADALHYCHE-------RKVIHRDIKPENLLMGYKGEL---KIADF--------GWSVHAP 166
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
+ G+ +++ PE++ E +D++ DLW GV+ Y L G PPF
Sbjct: 167 SLRRRXM--CGTLDYLPPEMI------EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH 218
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA 415
+ I FP +SD +KDLI +LL +RL
Sbjct: 219 TET---------------HRRIVNVDLKFP----PFLSDGSKDLISKLLRYHPPQRLPLK 259
Query: 416 SVLKHPWISTAGTAHRPLVTPQVIRRNQS 444
V++HPW+ A+ V P V + QS
Sbjct: 260 GVMEHPWVK----ANSRRVLPPVYQSTQS 284
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 67/216 (31%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVETFHHCQGHPNII 109
G LGKG + +V + A+K++ K ++ +E+E H + HPNI+
Sbjct: 20 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNIL 78
Query: 110 QLLEYYED--------------------------DEN----------------HERHKRI 127
++ Y+ D DE HER ++
Sbjct: 79 RMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER--KV 136
Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
HRD+KPEN+L + +L K+ DF SVH+P + G+ +++ PE
Sbjct: 137 IHRDIKPENLLMGYKGEL---KIADF--------GWSVHAPSLRRRXM--CGTLDYLPPE 183
Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
++ E +D++ DLW GV+ Y L G PPF
Sbjct: 184 MI------EGKTHDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 49/209 (23%)
Query: 236 GETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+ H C E + + HRD+KPEN+L + +L K+ DF SVH+P
Sbjct: 124 ADALHYCHE-------RKVIHRDIKPENLLMGYKGEL---KIADF--------GWSVHAP 165
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
+ G+ +++ PE++ E +D++ DLW GV+ Y L G PPF
Sbjct: 166 SLRRRXM--CGTLDYLPPEMI------EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH 217
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA 415
+ I FP +SD +KDLI +LL +RL
Sbjct: 218 TET---------------HRRIVNVDLKFP----PFLSDGSKDLISKLLRYHPPQRLPLK 258
Query: 416 SVLKHPWISTAGTAHRPLVTPQVIRRNQS 444
V++HPW+ A+ V P V + QS
Sbjct: 259 GVMEHPWVK----ANSRRVLPPVYQSTQS 283
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 89/216 (41%), Gaps = 67/216 (31%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVETFHHCQGHPNII 109
G LGKG + +V + A+K++ K ++ +E+E H + HPNI+
Sbjct: 19 GRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNIL 77
Query: 110 QLLEYYED--------------------------DEN----------------HERHKRI 127
++ Y+ D DE HER ++
Sbjct: 78 RMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER--KV 135
Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
HRD+KPEN+L + +L K+ DF SVH+P + G+ +++ PE
Sbjct: 136 IHRDIKPENLLMGYKGEL---KIADF--------GWSVHAPSLRRRXM--CGTLDYLPPE 182
Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
++ E +D++ DLW GV+ Y L G PPF
Sbjct: 183 MI------EGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 49/209 (23%)
Query: 236 GETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+ H C E + + HRD+KPEN+L + +L K+ DF SVH+P
Sbjct: 124 ADALHYCHE-------RKVIHRDIKPENLLMGYKGEL---KIADF--------GWSVHAP 165
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
+ G+ +++ PE++ E +D++ DLW GV+ Y L G PPF
Sbjct: 166 SLRRRXM--CGTLDYLPPEMI------EGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSH 217
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA 415
+ I FP +SD +KDLI +LL +RL
Sbjct: 218 TET---------------HRRIVNVDLKFP----PFLSDGSKDLISKLLRYHPPQRLPLK 258
Query: 416 SVLKHPWISTAGTAHRPLVTPQVIRRNQS 444
V++HPW+ A+ V P V + QS
Sbjct: 259 GVMEHPWVK----ANSRRVLPPVYQSTQS 283
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 88/213 (41%), Gaps = 67/213 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVETFHHCQGHPNIIQLL 112
LGKG + +V + A+K++ K ++ +E+E H + HPNI+++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLR-HPNILRMY 80
Query: 113 EYYED--------------------------DEN----------------HERHKRIAHR 130
Y+ D DE HER ++ HR
Sbjct: 81 NYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHER--KVIHR 138
Query: 131 DLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
D+KPEN+L + +L K+ DF SVH+P + G+ +++ PE++
Sbjct: 139 DIKPENLLMGYKGEL---KIADF--------GWSVHAPSLRRRXM--CGTLDYLPPEMI- 184
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E +D++ DLW GV+ Y L G PPF
Sbjct: 185 -----EGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 83/193 (43%), Gaps = 40/193 (20%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLA 297
T + + + + G+ HRD+KP NIL D+ +KLCDF + SG + A
Sbjct: 130 TVAIVKALYYLKEKHGVIHRDVKPSNILL---DERGQIKLCDFGI-SGRLVDDKAKDRSA 185
Query: 298 TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
G A +MAPE ++ P YD R D+WSLG+ + L G P Y NC D
Sbjct: 186 --------GCAAYMAPERIDP-PDPTKPDYDIRADVWSLGISLVELATGQFP-YKNCKTD 235
Query: 358 CGWQRGETCHACQEILFHSIQQ------GHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
E+L +Q+ GH F S + + ++ L KD RKR
Sbjct: 236 F------------EVLTKVLQEEPPLLPGHMGF--------SGDFQSFVKDCLTKDHRKR 275
Query: 412 LSAASVLKHPWIS 424
+L+H +I
Sbjct: 276 PKYNKLLEHSFIK 288
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 60/123 (48%), Gaps = 20/123 (16%)
Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS 167
I++ L Y + E+H + HRD+KP NIL D+ +KLCDF + SG +
Sbjct: 133 IVKALYYLK-----EKHG-VIHRDVKPSNILL---DERGQIKLCDFGI-SGRLVDDKAKD 182
Query: 168 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
A G A +MAPE ++ P YD R D+WSLG+ + L G P Y NC
Sbjct: 183 RSA--------GCAAYMAPERIDP-PDPTKPDYDIRADVWSLGISLVELATGQFP-YKNC 232
Query: 228 GED 230
D
Sbjct: 233 KTD 235
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 86/199 (43%), Gaps = 49/199 (24%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ + +RD+K EN++ D+ +K+ DF L GI ++ + TP E+
Sbjct: 124 RDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTP---------EY 171
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE++ E + Y + D W LGVV+Y ++CG PFY +
Sbjct: 172 LAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFY---------------NQDH 210
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP---- 421
E LF I FP T+S EAK L+ LL KD ++RL A V++H
Sbjct: 211 ERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
Query: 422 --WISTAGTAHRPLVTPQV 438
W P PQV
Sbjct: 267 INWQDVVQKKLLPPFKPQV 285
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 78/174 (44%), Gaps = 42/174 (24%)
Query: 70 ILTELEYAVKIIDKL--------PGH-----SRSRVFKEVETFHHCQGHPNIIQLLEYYE 116
LT L+YA + D+L G SR RVF E + I+ LEY
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG---AEIVSALEYL- 121
Query: 117 DDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLL 175
H R + +RD+K EN++ D+ +K+ DF L GI ++ + TP
Sbjct: 122 ----HSRD--VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTP--- 169
Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 229
E++APE++ E + Y + D W LGVV+Y ++CG PFY E
Sbjct: 170 ------EYLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 85/199 (42%), Gaps = 49/199 (24%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ + +RD+K EN++ D+ +K+ DF L GI ++ + TP E+
Sbjct: 127 RDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTP---------EY 174
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE++ E + Y + D W LGVV+Y ++CG PFY
Sbjct: 175 LAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---------------DH 213
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP---- 421
E LF I FP T+S EAK L+ LL KD ++RL A V++H
Sbjct: 214 ERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 269
Query: 422 --WISTAGTAHRPLVTPQV 438
W P PQV
Sbjct: 270 INWQDVVQKKLLPPFKPQV 288
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 78/174 (44%), Gaps = 42/174 (24%)
Query: 70 ILTELEYAVKIIDKL--------PGH-----SRSRVFKEVETFHHCQGHPNIIQLLEYYE 116
LT L+YA + D+L G SR RVF E + I+ LEY
Sbjct: 69 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG---AEIVSALEYL- 124
Query: 117 DDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLL 175
H R + +RD+K EN++ D+ +K+ DF L GI ++ + TP
Sbjct: 125 ----HSRD--VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTP--- 172
Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 229
E++APE++ E + Y + D W LGVV+Y ++CG PFY E
Sbjct: 173 ------EYLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 214
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 85/199 (42%), Gaps = 49/199 (24%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ + +RD+K EN++ D+ +K+ DF L GI ++ + TP E+
Sbjct: 124 RDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTP---------EY 171
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE++ E + Y + D W LGVV+Y ++CG PFY
Sbjct: 172 LAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---------------DH 210
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP---- 421
E LF I FP T+S EAK L+ LL KD ++RL A V++H
Sbjct: 211 ERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
Query: 422 --WISTAGTAHRPLVTPQV 438
W P PQV
Sbjct: 267 INWQDVVQKKLLPPFKPQV 285
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 78/174 (44%), Gaps = 42/174 (24%)
Query: 70 ILTELEYAVKIIDKL--------PGH-----SRSRVFKEVETFHHCQGHPNIIQLLEYYE 116
LT L+YA + D+L G SR RVF E + I+ LEY
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG---AEIVSALEYL- 121
Query: 117 DDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLL 175
H R + +RD+K EN++ D+ +K+ DF L GI ++ + TP
Sbjct: 122 ----HSRD--VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKTFCGTP--- 169
Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 229
E++APE++ E + Y + D W LGVV+Y ++CG PFY E
Sbjct: 170 ------EYLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 59/225 (26%)
Query: 50 RLKGE------ILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHH 101
R+K E ++G+GA+ VQ + T YA+K++ K S S F E
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 102 CQGHPNIIQLLEYYEDDE-------------------NHERHKRIA-------------- 128
P ++QL ++DD N++ ++ A
Sbjct: 130 FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAI 189
Query: 129 ------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
HRD+KP+N+L D+ +KL DF G+ +K N T VG+ +
Sbjct: 190 HSMGFIHRDVKPDNMLL---DKSGHLKLADF--GTCMKMNKE-----GMVRCDTAVGTPD 239
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
+++PE++ + G Y + CD WS+GV +Y +L G PFY +
Sbjct: 240 YISPEVLKSQGGD--GYYGRECDWWSVGVFLYEMLVGDTPFYADS 282
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 30/169 (17%)
Query: 233 WQRGETCHACQEI-LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
W R T + HS+ G HRD+KP+N+L D+ +KL DF G+ +K N
Sbjct: 174 WARFYTAEVVLALDAIHSM--GFIHRDVKPDNMLL---DKSGHLKLADF--GTCMKMNKE 226
Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
T VG+ ++++PE++ + G Y + CD WS+GV +Y +L G PFY
Sbjct: 227 -----GMVRCDTAVGTPDYISPEVLKSQGGD--GYYGRECDWWSVGVFLYEMLVGDTPFY 279
Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLI 400
+ +I+ H + FP+ + IS EAK+LI
Sbjct: 280 ADS----------LVGTYSKIMNH---KNSLTFPDD--NDISKEAKNLI 313
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 59/225 (26%)
Query: 50 RLKGE------ILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHH 101
R+K E ++G+GA+ VQ + T YA+K++ K S S F E
Sbjct: 65 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 124
Query: 102 CQGHPNIIQLLEYYEDDE-------------------NHERHKRIA-------------- 128
P ++QL ++DD N++ ++ A
Sbjct: 125 FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAI 184
Query: 129 ------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
HRD+KP+N+L D+ +KL DF G+ +K N T VG+ +
Sbjct: 185 HSMGFIHRDVKPDNMLL---DKSGHLKLADF--GTCMKMNKE-----GMVRCDTAVGTPD 234
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
+++PE++ + G Y + CD WS+GV +Y +L G PFY +
Sbjct: 235 YISPEVLKSQGGD--GYYGRECDWWSVGVFLYEMLVGDTPFYADS 277
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 30/169 (17%)
Query: 233 WQRGETCHACQEI-LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
W R T + HS+ G HRD+KP+N+L D+ +KL DF G+ +K N
Sbjct: 169 WARFYTAEVVLALDAIHSM--GFIHRDVKPDNMLL---DKSGHLKLADF--GTCMKMNKE 221
Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
T VG+ ++++PE++ + G Y + CD WS+GV +Y +L G PFY
Sbjct: 222 -----GMVRCDTAVGTPDYISPEVLKSQGGD--GYYGRECDWWSVGVFLYEMLVGDTPFY 274
Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLI 400
+ +I+ H + FP+ + IS EAK+LI
Sbjct: 275 ADS----------LVGTYSKIMNH---KNSLTFPDD--NDISKEAKNLI 308
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 95/225 (42%), Gaps = 59/225 (26%)
Query: 50 RLKGE------ILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHH 101
R+K E ++G+GA+ VQ + T YA+K++ K S S F E
Sbjct: 70 RMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMA 129
Query: 102 CQGHPNIIQLLEYYEDDE-------------------NHERHKRIA-------------- 128
P ++QL ++DD N++ ++ A
Sbjct: 130 FANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAI 189
Query: 129 ------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
HRD+KP+N+L D+ +KL DF G+ +K N T VG+ +
Sbjct: 190 HSMGFIHRDVKPDNMLL---DKSGHLKLADF--GTCMKMNKE-----GMVRCDTAVGTPD 239
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
+++PE++ + G Y + CD WS+GV +Y +L G PFY +
Sbjct: 240 YISPEVLKSQGGD--GYYGRECDWWSVGVFLYEMLVGDTPFYADS 282
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 79/169 (46%), Gaps = 30/169 (17%)
Query: 233 WQRGETCHACQEI-LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
W R T + HS+ G HRD+KP+N+L D+ +KL DF G+ +K N
Sbjct: 174 WARFYTAEVVLALDAIHSM--GFIHRDVKPDNMLL---DKSGHLKLADF--GTCMKMNKE 226
Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
T VG+ ++++PE++ + G Y + CD WS+GV +Y +L G PFY
Sbjct: 227 -----GMVRCDTAVGTPDYISPEVLKSQGGD--GYYGRECDWWSVGVFLYEMLVGDTPFY 279
Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLI 400
+ +I+ H + FP+ + IS EAK+LI
Sbjct: 280 ADS----------LVGTYSKIMNH---KNSLTFPDD--NDISKEAKNLI 313
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 49/199 (24%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ + +RD+K EN++ D+ +K+ DF L GI ++ TP E+
Sbjct: 129 RDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTP---------EY 176
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE++ E + Y + D W LGVV+Y ++CG PFY
Sbjct: 177 LAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---------------DH 215
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP---- 421
E LF I FP T+S EAK L+ LL KD ++RL A V++H
Sbjct: 216 ERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 271
Query: 422 --WISTAGTAHRPLVTPQV 438
W P PQV
Sbjct: 272 INWQDVVQKKLLPPFKPQV 290
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 77/174 (44%), Gaps = 42/174 (24%)
Query: 70 ILTELEYAVKIIDKL--------PGH-----SRSRVFKEVETFHHCQGHPNIIQLLEYYE 116
LT L+YA + D+L G SR RVF E + I+ LEY
Sbjct: 71 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG---AEIVSALEYL- 126
Query: 117 DDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLL 175
H R + +RD+K EN++ D+ +K+ DF L GI ++ TP
Sbjct: 127 ----HSRD--VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTP--- 174
Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 229
E++APE++ E + Y + D W LGVV+Y ++CG PFY E
Sbjct: 175 ------EYLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 216
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 49/199 (24%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ + +RD+K EN++ D+ +K+ DF L GI ++ TP E+
Sbjct: 124 RDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTP---------EY 171
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE++ E + Y + D W LGVV+Y ++CG PFY
Sbjct: 172 LAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---------------DH 210
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP---- 421
E LF I FP T+S EAK L+ LL KD ++RL A V++H
Sbjct: 211 ERLFELILMEEIRFP----RTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
Query: 422 --WISTAGTAHRPLVTPQV 438
W P PQV
Sbjct: 267 INWQDVVQKKLLPPFKPQV 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 77/174 (44%), Gaps = 42/174 (24%)
Query: 70 ILTELEYAVKIIDKL--------PGH-----SRSRVFKEVETFHHCQGHPNIIQLLEYYE 116
LT L+YA + D+L G SR RVF E + I+ LEY
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG---AEIVSALEYL- 121
Query: 117 DDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLL 175
H R + +RD+K EN++ D+ +K+ DF L GI ++ TP
Sbjct: 122 ----HSRD--VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTP--- 169
Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 229
E++APE++ E + Y + D W LGVV+Y ++CG PFY E
Sbjct: 170 ------EYLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 49/199 (24%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ + +RD+K EN++ D+ +K+ DF L GI ++ TP E+
Sbjct: 124 RDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTP---------EY 171
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE++ E + Y + D W LGVV+Y ++CG PFY
Sbjct: 172 LAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---------------DH 210
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP---- 421
E LF I FP T+S EAK L+ LL KD ++RL A V++H
Sbjct: 211 ERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
Query: 422 --WISTAGTAHRPLVTPQV 438
W P PQV
Sbjct: 267 INWQDVVQKKLLPPFKPQV 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 77/174 (44%), Gaps = 42/174 (24%)
Query: 70 ILTELEYAVKIIDKL--------PGH-----SRSRVFKEVETFHHCQGHPNIIQLLEYYE 116
LT L+YA + D+L G SR RVF E + I+ LEY
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG---AEIVSALEYL- 121
Query: 117 DDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLL 175
H R + +RD+K EN++ D+ +K+ DF L GI ++ TP
Sbjct: 122 ----HSRD--VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTP--- 169
Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 229
E++APE++ E + Y + D W LGVV+Y ++CG PFY E
Sbjct: 170 ------EYLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/199 (29%), Positives = 84/199 (42%), Gaps = 49/199 (24%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ + +RD+K EN++ D+ +K+ DF L GI ++ TP E+
Sbjct: 124 RDVVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTP---------EY 171
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE++ E + Y + D W LGVV+Y ++CG PFY
Sbjct: 172 LAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ---------------DH 210
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP---- 421
E LF I FP T+S EAK L+ LL KD ++RL A V++H
Sbjct: 211 ERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLS 266
Query: 422 --WISTAGTAHRPLVTPQV 438
W P PQV
Sbjct: 267 INWQDVVQKKLLPPFKPQV 285
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 77/174 (44%), Gaps = 42/174 (24%)
Query: 70 ILTELEYAVKIIDKL--------PGH-----SRSRVFKEVETFHHCQGHPNIIQLLEYYE 116
LT L+YA + D+L G SR RVF E + I+ LEY
Sbjct: 66 FLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYG---AEIVSALEYL- 121
Query: 117 DDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLL 175
H R + +RD+K EN++ D+ +K+ DF L GI ++ TP
Sbjct: 122 ----HSRD--VVYRDIKLENLML---DKDGHIKITDFGLCKEGISDGATMKXFCGTP--- 169
Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 229
E++APE++ E + Y + D W LGVV+Y ++CG PFY E
Sbjct: 170 ------EYLAPEVL------EDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE 211
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 87/197 (44%), Gaps = 39/197 (19%)
Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
Q C A + L + QG+ HRD+K ++IL + VKL DF + I +
Sbjct: 142 QIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGR---VKLSDFGFCAQISKDVPKR 198
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
L VG+ +MAPE+++ S Y D+WSLG++V ++ G PP++ +
Sbjct: 199 KXL--------VGTPYWMAPEVISR------SLYATEVDIWSLGIMVIEMVDGEPPYFSD 244
Query: 354 CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWST---ISDEAKDLIRRLLVKDARK 410
A + + D P + +S +D + R+LV+D ++
Sbjct: 245 S----------PVQAMKRL---------RDSPPPKLKNSHKVSPVLRDFLERMLVRDPQE 285
Query: 411 RLSAASVLKHPWISTAG 427
R +A +L HP++ G
Sbjct: 286 RATAQELLDHPFLLQTG 302
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRD+K ++IL + VKL DF + I + L VG+ +MAP
Sbjct: 162 VIHRDIKSDSILLTLDGR---VKLSDFGFCAQISKDVPKRKXL--------VGTPYWMAP 210
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
E+++ S Y D+WSLG++V ++ G PP++ +
Sbjct: 211 EVISR------SLYATEVDIWSLGIMVIEMVDGEPPYFSD 244
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 88/189 (46%), Gaps = 43/189 (22%)
Query: 238 TCHACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
T +A + IL HS +GI +RDLK +NIL D+ +K+ DF + +
Sbjct: 122 TFYAAEIILGLQFLHS--KGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKT 176
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
+ G+ +++APEI+ Y+ D WS GV++Y +L G PF+G
Sbjct: 177 NEFC--------GTPDYIAPEIL------LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 222
Query: 354 CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS 413
E+ LFHSI+ + +P W + EAKDL+ +L V++ KRL
Sbjct: 223 DEEE---------------LFHSIRMDNPFYP--RW--LEKEAKDLLVKLFVREPEKRLG 263
Query: 414 A-ASVLKHP 421
+ +HP
Sbjct: 264 VRGDIRQHP 272
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 56/127 (44%), Gaps = 32/127 (25%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K I +RDLK +NIL D+ +K+ DF + + + G+ +++
Sbjct: 138 KGIVYRDLKLDNILL---DKDGHIKIADFGMCKENMLGDAKTNEFC--------GTPDYI 186
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 244
APEI+ Y+ D WS GV++Y +L G PF+G E+
Sbjct: 187 APEIL------LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE-------------- 226
Query: 245 ILFHSIQ 251
LFHSI+
Sbjct: 227 -LFHSIR 232
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 88/189 (46%), Gaps = 43/189 (22%)
Query: 238 TCHACQEIL----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
T +A + IL HS +GI +RDLK +NIL D+ +K+ DF +
Sbjct: 121 TFYAAEIILGLQFLHS--KGIVYRDLKLDNILL---DKDGHIKIADFGMCK--------E 167
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
+ L G+ +++APEI+ Y+ D WS GV++Y +L G PF+G
Sbjct: 168 NMLGDAKTNXFCGTPDYIAPEIL------LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQ 221
Query: 354 CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS 413
E+ LFHSI+ + +P W + EAKDL+ +L V++ KRL
Sbjct: 222 DEEE---------------LFHSIRMDNPFYP--RW--LEKEAKDLLVKLFVREPEKRLG 262
Query: 414 A-ASVLKHP 421
+ +HP
Sbjct: 263 VRGDIRQHP 271
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 56/127 (44%), Gaps = 32/127 (25%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K I +RDLK +NIL D+ +K+ DF + + L G+ +++
Sbjct: 137 KGIVYRDLKLDNILL---DKDGHIKIADFGMCK--------ENMLGDAKTNXFCGTPDYI 185
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 244
APEI+ Y+ D WS GV++Y +L G PF+G E+
Sbjct: 186 APEIL------LGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE-------------- 225
Query: 245 ILFHSIQ 251
LFHSI+
Sbjct: 226 -LFHSIR 231
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 74/169 (43%), Gaps = 40/169 (23%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPV 305
HS+ I +RDLKPENIL D + L DF L I+ N++ + TP
Sbjct: 155 LHSL--NIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNSTTSTFCGTP------ 203
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
E++APE+++ YD+ D W LG V+Y +L G PPFY T
Sbjct: 204 ---EYLAPEVLHK------QPYDRTVDWWCLGAVLYEMLYGLPPFYSR----------NT 244
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA 414
IL +Q I++ A+ L+ LL KD KRL A
Sbjct: 245 AEMYDNILNKPLQLK---------PNITNSARHLLEGLLQKDRTKRLGA 284
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 89/223 (39%), Gaps = 64/223 (28%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQ 103
D + LK ++GKG++ V + E+ YAVK++ K L + E
Sbjct: 39 DFHFLK--VIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNV 96
Query: 104 GHPNIIQL-------------LEYYEDDE--NHERHKR---------------------- 126
HP ++ L L+Y E H + +R
Sbjct: 97 KHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLH 156
Query: 127 ---IAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 182
I +RDLKPENIL D + L DF L I+ N++ + TP E
Sbjct: 157 SLNIVYRDLKPENILL---DSQGHIVLTDFGLCKENIEHNSTTSTFCGTP---------E 204
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
++APE+++ YD+ D W LG V+Y +L G PPFY
Sbjct: 205 YLAPEVLHK------QPYDRTVDWWCLGAVLYEMLYGLPPFYS 241
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 91/212 (42%), Gaps = 59/212 (27%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRV---FKEVETFHHCQGHPNIIQLL 112
+GKG++ V T+ YA+K ++K R+ V FKE++ + HP ++ L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLE-HPFLVNLW 81
Query: 113 EYYEDDEN----------------------------------------HERHKRIAHRDL 132
++D+E+ + +++RI HRD+
Sbjct: 82 YSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDM 141
Query: 133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAF 192
KP+NIL D+ V + DF++ + + T + T G+ +MAPE+ F
Sbjct: 142 KPDNILL---DEHGHVHITDFNIAAMLPRETQI---------TTMAGTKPYMAPEM---F 186
Query: 193 MGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
+ +GY D WSLGV Y LL G P++
Sbjct: 187 SSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH 218
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 82/174 (47%), Gaps = 32/174 (18%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
Q I HRD+KP+NIL D+ V + DF++ + + T + T G+ +M
Sbjct: 134 QRIIHRDMKPDNILL---DEHGHVHITDFNIAAMLPRETQI---------TTMAGTKPYM 181
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APE+ F + +GY D WSLGV Y LL G P++ R T + +E
Sbjct: 182 APEM---FSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHI---------RSST--SSKE 227
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS-VLKHPWIS 424
I+ H+ + +P S S E L+++LL + +R S S V P+++
Sbjct: 228 IV-HTFETTVVTYP----SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMN 276
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 86/188 (45%), Gaps = 46/188 (24%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVHS- 294
CHA Q + HRDLK EN L SP +K+CDF G ++ +HS
Sbjct: 131 CHAMQ----------VCHRDLKLENTLL----DGSPAPRLKICDF----GYSKSSVLHSQ 172
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 354
P +T VG+ ++APE++ + E G K D+WS GV +Y++L G PF +
Sbjct: 173 PKST------VGTPAYIAPEVL---LKKEYDG--KVADVWSCGVTLYVMLVGAYPF-EDP 220
Query: 355 GEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA 414
E +++ H I Y P+ + IS E + LI R+ V D KR+S
Sbjct: 221 EEPKNFRK----------TIHRILNVQYAIPD--YVHISPECRHLISRIFVADPAKRISI 268
Query: 415 ASVLKHPW 422
+ H W
Sbjct: 269 PEIRNHEW 276
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 23/102 (22%)
Query: 126 RIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVHS-PLATPLLLTPVGSA 181
++ HRDLK EN L SP +K+CDF G ++ +HS P +T VG+
Sbjct: 135 QVCHRDLKLENTLL----DGSPAPRLKICDF----GYSKSSVLHSQPKST------VGTP 180
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
++APE++ + E G K D+WS GV +Y++L G PF
Sbjct: 181 AYIAPEVL---LKKEYDG--KVADVWSCGVTLYVMLVGAYPF 217
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 86/188 (45%), Gaps = 46/188 (24%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVHS- 294
CHA Q + HRDLK EN L SP +K+CDF G ++ +HS
Sbjct: 130 CHAMQ----------VCHRDLKLENTLL----DGSPAPRLKICDF----GYSKSSVLHSQ 171
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 354
P +T VG+ ++APE++ + E G K D+WS GV +Y++L G PF +
Sbjct: 172 PKST------VGTPAYIAPEVL---LKKEYDG--KVADVWSCGVTLYVMLVGAYPF-EDP 219
Query: 355 GEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA 414
E +++ H I Y P+ + IS E + LI R+ V D KR+S
Sbjct: 220 EEPKNFRK----------TIHRILNVQYAIPD--YVHISPECRHLISRIFVADPAKRISI 267
Query: 415 ASVLKHPW 422
+ H W
Sbjct: 268 PEIRNHEW 275
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 55/102 (53%), Gaps = 23/102 (22%)
Query: 126 RIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVHS-PLATPLLLTPVGSA 181
++ HRDLK EN L SP +K+CDF G ++ +HS P +T VG+
Sbjct: 134 QVCHRDLKLENTLL----DGSPAPRLKICDF----GYSKSSVLHSQPKST------VGTP 179
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
++APE++ + E G K D+WS GV +Y++L G PF
Sbjct: 180 AYIAPEVL---LKKEYDG--KVADVWSCGVTLYVMLVGAYPF 216
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 43/216 (19%)
Query: 213 VYILLCGYP--PFYGNCGEDCGWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCV 267
+Y++L P Y + C + T +E+ L + + + HRD+KPEN+L
Sbjct: 98 IYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPENLLLG 157
Query: 268 HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY 327
+K+ DF SVH+P + T G+ +++ PE++ M +
Sbjct: 158 ---LKGELKIADF--------GWSVHAP--SLRRKTMCGTLDYLPPEMIEGRM------H 198
Query: 328 DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEG 387
+++ DLW +GV+ Y LL G PPF A + I + FP
Sbjct: 199 NEKVDLWCIGVLCYELLVGNPPFES---------------ASHNETYRRIVKVDLKFP-- 241
Query: 388 EWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
+++ A+DLI +LL + +RL A V HPW+
Sbjct: 242 --ASVPTGAQDLISKLLRHNPSERLPLAQVSAHPWV 275
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 87/214 (40%), Gaps = 63/214 (29%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVETFHHCQGHPNII 109
G LGKG + +V + A+K++ K ++ +E+E H HPNI+
Sbjct: 28 GRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLH-HPNIL 86
Query: 110 QLLEYYED--------------------------DENHE--------------RHKRIAH 129
+L Y+ D DE K++ H
Sbjct: 87 RLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIH 146
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KPEN+L +K+ DF SVH+P + T G+ +++ PE++
Sbjct: 147 RDIKPENLLLG---LKGELKIADF--------GWSVHAP--SLRRKTMCGTLDYLPPEMI 193
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
M ++++ DLW +GV+ Y LL G PPF
Sbjct: 194 EGRM------HNEKVDLWCIGVLCYELLVGNPPF 221
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 27/174 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
G HRD+KP+NIL D+ ++L DF GS +K T L VG+ ++++
Sbjct: 182 GYVHRDIKPDNILL---DRCGHIRLADF--GSCLKLRAD-----GTVRSLVAVGTPDYLS 231
Query: 313 PEIVNAFMGPEASGYDK-RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
PEI+ A G +G CD W+LGV Y + G PFY + + G+ H +
Sbjct: 232 PEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET---YGKIVHYKEH 288
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARK--RLSAASVLKHPWI 423
+ + +G + +EA+D I+RLL + R A HP+
Sbjct: 289 LSLPLVDEG-----------VPEEARDFIQRLLCPPETRLGRGGAGDFRTHPFF 331
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 109/274 (39%), Gaps = 62/274 (22%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRV--FKEVETFHHCQGHPNIIQL 111
+++G+GA++ V T YA+KI++K R V F+E E G I
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFRE-ERDVLVNGDRRWITQ 125
Query: 112 LEYYEDDENH------------------ERHKRI------------------------AH 129
L + DEN+ + +RI H
Sbjct: 126 LHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVH 185
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RD+KP+NIL D+ ++L DF GS +K T L VG+ ++++PEI+
Sbjct: 186 RDIKPDNILL---DRCGHIRLADF--GSCLKLRAD-----GTVRSLVAVGTPDYLSPEIL 235
Query: 190 NAFMGPEASGYDK-RCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFH 248
A G +G CD W+LGV Y + G PFY + + G+ H + +
Sbjct: 236 QAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET---YGKIVHYKEHLSLP 292
Query: 249 SIQQGIAH--RDLKPENILCVHPDQLSPVKLCDF 280
+ +G+ RD + +LC +L DF
Sbjct: 293 LVDEGVPEEARDFI-QRLLCPPETRLGRGGAGDF 325
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 39/177 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
Q I HRD+KP N+L +K+ DF + + K + + LL VG+ FM
Sbjct: 156 QKIIHRDIKPSNLLVGEDGH---IKIADFGVSNEFKGSDA--------LLSNTVGTPAFM 204
Query: 312 APEIVNA----FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
APE ++ F G K D+W++GV +Y + G PF +R H
Sbjct: 205 APESLSETRKIFSG-------KALDVWAMGVTLYCFVFGQCPFMD--------ERIMCLH 249
Query: 368 ACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
+ I+ +FP+ I+++ KDLI R+L K+ R+ + HPW++
Sbjct: 250 S-------KIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 96/252 (38%), Gaps = 92/252 (36%)
Query: 44 CFQ-DLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDK------------------- 83
C Q + Y LK EI GKG+Y V+ N YA+K++ K
Sbjct: 9 CVQLNQYTLKDEI-GKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTR 67
Query: 84 -------LPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYED-DENHE------------- 122
P +V++E+ HPN+++L+E +D +E+H
Sbjct: 68 PAPGGCIQPRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVM 126
Query: 123 ---------------------------RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDL 155
+++I HRD+KP N+L +K+ DF +
Sbjct: 127 EVPTLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGH---IKIADFGV 183
Query: 156 GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA----FMGPEASGYDKRCDLWSLGV 211
+ K + + LL VG+ FMAPE ++ F G K D+W++GV
Sbjct: 184 SNEFKGSDA--------LLSNTVGTPAFMAPESLSETRKIFSG-------KALDVWAMGV 228
Query: 212 VVYILLCGYPPF 223
+Y + G PF
Sbjct: 229 TLYCFVFGQCPF 240
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 57/217 (26%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLP--GHSRSRVFKEVETFHHCQGHPNIIQL 111
+++G+GA+ VQ + ++ YA+K++ K S S F E P ++QL
Sbjct: 81 KVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQL 140
Query: 112 LEYYEDDE-------------------NHERHKRIA--------------------HRDL 132
++DD+ N++ ++ A HRD+
Sbjct: 141 FCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDV 200
Query: 133 KPENILCVHPDQLSPVKLCDFDLGSGIKFNTS--VHSPLATPLLLTPVGSAEFMAPEIVN 190
KP+N+L D+ +KL DF G+ +K + + VH T VG+ ++++PE++
Sbjct: 201 KPDNMLL---DKHGHLKLADF--GTCMKMDETGMVHCD-------TAVGTPDYISPEVLK 248
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
+ G Y + CD WS+GV ++ +L G PFY +
Sbjct: 249 SQGGD--GYYGRECDWWSVGVFLFEMLVGDTPFYADS 283
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 59/104 (56%), Gaps = 16/104 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS--VHSPLATPLLLTPVGSAEF 310
G+ HRD+KP+N+L D+ +KL DF G+ +K + + VH T VG+ ++
Sbjct: 194 GLIHRDVKPDNMLL---DKHGHLKLADF--GTCMKMDETGMVHCD-------TAVGTPDY 241
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 354
++PE++ + G Y + CD WS+GV ++ +L G PFY +
Sbjct: 242 ISPEVLKSQGGD--GYYGRECDWWSVGVFLFEMLVGDTPFYADS 283
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 46/208 (22%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
++ I HRD+KP NIL D+ VKL DF G + + G+ EF
Sbjct: 170 EKNICHRDVKPSNILM---DKNGRVKLSDF--GES--------EYMVDKKIKGSRGTYEF 216
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
M PE F E+S + D+WSLG+ +Y++ PF +
Sbjct: 217 MPPE----FFSNESSYNGAKVDIWSLGICLYVMFYNVVPF--------------SLKISL 258
Query: 371 EILFHSIQQGHYDFP----------EGEWST-----ISDEAKDLIRRLLVKDARKRLSAA 415
LF++I+ + ++P + ST +S+E D ++ L K+ +R+++
Sbjct: 259 VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSE 318
Query: 416 SVLKHPWISTAGTAHRPLVTPQVIRRNQ 443
LKH W++ + ++ ++ +
Sbjct: 319 DALKHEWLADTNIEDLREFSKELYKKRK 346
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 46/100 (46%), Gaps = 17/100 (17%)
Query: 124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
K I HRD+KP NIL D+ VKL DF G + + G+ EF
Sbjct: 170 EKNICHRDVKPSNILM---DKNGRVKLSDF--GES--------EYMVDKKIKGSRGTYEF 216
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
M PE F E+S + D+WSLG+ +Y++ PF
Sbjct: 217 MPPE----FFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 80/184 (43%), Gaps = 43/184 (23%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
HS+ GI +RDLKPENIL D+ +KL DF G+ H A G
Sbjct: 146 LHSL--GIIYRDLKPENILL---DEEGHIKLTDF----GLSKEAIDHEKKAYSF----CG 192
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
+ E+MAPE+VN G+ D WS GV+++ +L G PF G R ET
Sbjct: 193 TVEYMAPEVVNR------QGHSHSADWWSYGVLMFEMLTGSLPFQGK-------DRKETM 239
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP 421
L + G F +S EA+ L+R L ++ RL A + +H
Sbjct: 240 -----TLILKAKLGMPQF-------LSTEAQSLLRALFKRNPANRLGSGPDGAEEIKRHV 287
Query: 422 WIST 425
+ ST
Sbjct: 288 FYST 291
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 49/100 (49%), Gaps = 17/100 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I +RDLKPENIL D+ +KL DF G+ H A G+ E+MAP
Sbjct: 151 IIYRDLKPENILL---DEEGHIKLTDF----GLSKEAIDHEKKAYSF----CGTVEYMAP 199
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
E+VN G+ D WS GV+++ +L G PF G
Sbjct: 200 EVVNR------QGHSHSADWWSYGVLMFEMLTGSLPFQGK 233
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 73/173 (42%), Gaps = 40/173 (23%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRDLKPEN+L D K+ DF L + + L T GS + AP
Sbjct: 132 VVHRDLKPENVLL---DAHMNAKIADFGLSNMMS---------DGEFLRTSCGSPNYAAP 179
Query: 314 EIVNA--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
E+++ + GPE D+WS GV++Y LLCG PF + H
Sbjct: 180 EVISGRLYAGPEV-------DIWSCGVILYALLCGTLPF-------------DDEHV--P 217
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
LF I+ G + PE ++ L+ +L D KR + + +H W
Sbjct: 218 TLFKKIRGGVFYIPE----YLNRSVATLLMHMLQVDPLKRATIKDIREHEWFK 266
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 91/216 (42%), Gaps = 65/216 (30%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSR---SRVFKEVETFHHCQGHPNII 109
G+ LG G + V+ + LT + AVKI+++ S ++ +E++ + HP+II
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-HPHII 74
Query: 110 QL-------------LEYYEDDENHE---RHKRI------------------------AH 129
+L +EY E + +H R+ H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVH 134
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RDLKPEN+L D K+ DF L + + L T GS + APE++
Sbjct: 135 RDLKPENVLL---DAHMNAKIADFGLSNMMS---------DGEFLRTSCGSPNYAAPEVI 182
Query: 190 NA--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ + GPE D+WS GV++Y LLCG PF
Sbjct: 183 SGRLYAGPEV-------DIWSCGVILYALLCGTLPF 211
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 61/216 (28%)
Query: 55 ILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQL 111
LGKG +A + T+ +A KI+ K L H R ++ E+ + H H +++
Sbjct: 28 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI-SIHRSLAHQHVVGF 86
Query: 112 LEYYEDD----------------ENHERHK------------------------RIAHRD 131
++ED+ E H+R K R+ HRD
Sbjct: 87 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 146
Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
LK N+ ++ VK+ DF L + ++++ L G+ ++APE+++
Sbjct: 147 LKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLC--------GTPNYIAPEVLSK 195
Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
G+ D+WS+G ++Y LL G PPF +C
Sbjct: 196 ------KGHSFEVDVWSIGCIMYTLLVGKPPFETSC 225
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 36/185 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ + HRDLK N+ ++ VK+ DF L + ++++ L G+ +
Sbjct: 139 RNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLC--------GTPNY 187
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE+++ G+ D+WS+G ++Y LL G PPF +C ++
Sbjct: 188 IAPEVLSK------KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------------ 229
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
+ I++ Y P+ I+ A LI+++L D R + +L + ++
Sbjct: 230 ---YLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 282
Query: 431 RPLVT 435
R +T
Sbjct: 283 RLPIT 287
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 61/216 (28%)
Query: 55 ILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQL 111
LGKG +A + T+ +A KI+ K L H R ++ E+ + H H +++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI-SIHRSLAHQHVVGF 82
Query: 112 LEYYEDD----------------ENHERHK------------------------RIAHRD 131
++ED+ E H+R K R+ HRD
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
LK N+ ++ VK+ DF L + ++++ L G+ ++APE+++
Sbjct: 143 LKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLC--------GTPNYIAPEVLSK 191
Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
G+ D+WS+G ++Y LL G PPF +C
Sbjct: 192 ------KGHSFEVDVWSIGCIMYTLLVGKPPFETSC 221
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 36/185 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ + HRDLK N+ ++ VK+ DF L + ++++ L G+ +
Sbjct: 135 RNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLC--------GTPNY 183
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE+++ G+ D+WS+G ++Y LL G PPF +C ++
Sbjct: 184 IAPEVLSK------KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------------ 225
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
+ I++ Y P+ I+ A LI+++L D R + +L + ++
Sbjct: 226 ---YLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 278
Query: 431 RPLVT 435
R +T
Sbjct: 279 RLPIT 283
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 61/216 (28%)
Query: 55 ILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQL 111
LGKG +A + T+ +A KI+ K L H R ++ E+ + H H +++
Sbjct: 24 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI-SIHRSLAHQHVVGF 82
Query: 112 LEYYEDD----------------ENHERHK------------------------RIAHRD 131
++ED+ E H+R K R+ HRD
Sbjct: 83 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 142
Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
LK N+ ++ VK+ DF L + ++++ L G+ ++APE+++
Sbjct: 143 LKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLC--------GTPNYIAPEVLSK 191
Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
G+ D+WS+G ++Y LL G PPF +C
Sbjct: 192 ------KGHSFEVDVWSIGCIMYTLLVGKPPFETSC 221
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 36/185 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ + HRDLK N+ ++ VK+ DF L + ++++ L G+ +
Sbjct: 135 RNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKTLC--------GTPNY 183
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE+++ G+ D+WS+G ++Y LL G PPF +C ++
Sbjct: 184 IAPEVLSK------KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------------ 225
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
+ I++ Y P+ I+ A LI+++L D R + +L + ++
Sbjct: 226 ---YLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 278
Query: 431 RPLVT 435
R +T
Sbjct: 279 RLPIT 283
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 43/197 (21%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP-VGSAEFM 311
GI HRDLKP NI+ V D +K+ DF L +T ++TP V + +
Sbjct: 144 GIIHRDLKPSNIV-VKSD--CTLKILDFGLARTA----------STNFMMTPYVVTRYYR 190
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN--------CGEDCGWQRG 363
APE++ GY + D+WS+G ++ L+ G F G E G
Sbjct: 191 APEVILGM------GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSA 244
Query: 364 ETCHACQEILFHSIQQG-------------HYDFP-EGEWSTI-SDEAKDLIRRLLVKDA 408
E A Q + + ++ + FP E E I + +A+DL+ ++LV D
Sbjct: 245 EFMAALQPTVRNYVENRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDP 304
Query: 409 RKRLSAASVLKHPWIST 425
KR+S L+HP+I+
Sbjct: 305 DKRISVDEALRHPYITV 321
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 33/153 (21%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP-VGSAEFMA 185
I HRDLKP NI+ V D +K+ DF L +T ++TP V + + A
Sbjct: 145 IIHRDLKPSNIV-VKSD--CTLKILDFGLARTA----------STNFMMTPYVVTRYYRA 191
Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN--------CGEDCGWQRGE 237
PE++ GY + D+WS+G ++ L+ G F G E G E
Sbjct: 192 PEVILGM------GYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAE 245
Query: 238 TCHACQEILFHSIQQ-----GIAHRDLKPENIL 265
A Q + + ++ GIA +L P+ I
Sbjct: 246 FMAALQPTVRNYVENRPAYPGIAFEELFPDWIF 278
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMXGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 167 XGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 WIST--AGTAHRPLVT 435
W + A RP VT
Sbjct: 263 WYNKPLKKGAKRPRVT 278
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 80/178 (44%), Gaps = 36/178 (20%)
Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
H++Q +AHRDLK EN L SP +K+ DF ++ S + TP
Sbjct: 132 HAMQ--VAHRDLKLENTLL----DGSPAPRLKIADFGYSKASVLHSQPKSAVGTP----- 180
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE 364
++APE++ + E G K D+WS GV +Y++L G PF + E +++
Sbjct: 181 ----AYIAPEVL---LKKEYDG--KVADVWSCGVTLYVMLVGAYPF-EDPEEPKNFRKT- 229
Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPW 422
H I Y P+ + IS E + LI R+ V D KR+S + H W
Sbjct: 230 ---------IHRILNVQYAIPD--YVHISPECRHLISRIFVADPAKRISIPEIRNHEW 276
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 21/101 (20%)
Query: 126 RIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
++AHRDLK EN L SP +K+ DF ++ S + TP
Sbjct: 135 QVAHRDLKLENTLL----DGSPAPRLKIADFGYSKASVLHSQPKSAVGTP---------A 181
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
++APE++ + E G K D+WS GV +Y++L G PF
Sbjct: 182 YIAPEVL---LKKEYDG--KVADVWSCGVTLYVMLVGAYPF 217
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 72
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 133 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMXGTLPYVAPELLK--- 180
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 181 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 40/193 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 119 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 167
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 168 XGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 223 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 263
Query: 422 WIST--AGTAHRP 432
W + A RP
Sbjct: 264 WYNKPLKKGAKRP 276
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI V D + +K+ DF L T+ S + TP ++T + A
Sbjct: 146 GIIHRDLKPSNI-VVKSD--ATLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG--------NCGEDCGWQRGE 364
PE++ GY + D+WS+GV++ ++ G F G E G E
Sbjct: 194 PEVILGM------GYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 365 TCHACQEILFHSIQQ----GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDAR 409
Q + ++ Y F + E + + + +A+DL+ ++LV DA
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 410 KRLSAASVLKHPWIST 425
KR+S L+HP+I+
Sbjct: 308 KRISVDEALQHPYINV 323
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 18/93 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI V D + +K+ DF L T+ S + TP ++T + AP
Sbjct: 147 IIHRDLKPSNI-VVKSD--ATLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRAP 194
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG 219
E++ GY + D+WS+GV++ ++ G
Sbjct: 195 EVILGM------GYKENVDIWSVGVIMGEMIKG 221
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 85/188 (45%), Gaps = 46/188 (24%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVHS- 294
CHA Q + HRDLK EN L SP +K+C F G ++ +HS
Sbjct: 131 CHAMQ----------VCHRDLKLENTLL----DGSPAPRLKICAF----GYSKSSVLHSQ 172
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 354
P +T VG+ ++APE++ + E G K D+WS GV +Y++L G PF +
Sbjct: 173 PKST------VGTPAYIAPEVL---LKKEYDG--KVADVWSCGVTLYVMLVGAYPF-EDP 220
Query: 355 GEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA 414
E +++ H I Y P+ + IS E + LI R+ V D KR+S
Sbjct: 221 EEPKNFRK----------TIHRILNVQYAIPD--YVHISPECRHLISRIFVADPAKRISI 268
Query: 415 ASVLKHPW 422
+ H W
Sbjct: 269 PEIRNHEW 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 23/102 (22%)
Query: 126 RIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVHS-PLATPLLLTPVGSA 181
++ HRDLK EN L SP +K+C F G ++ +HS P +T VG+
Sbjct: 135 QVCHRDLKLENTLL----DGSPAPRLKICAF----GYSKSSVLHSQPKST------VGTP 180
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
++APE++ + E G K D+WS GV +Y++L G PF
Sbjct: 181 AYIAPEVL---LKKEYDG--KVADVWSCGVTLYVMLVGAYPF 217
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 88/196 (44%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI V D + +K+ DF L T+ S + TP ++T + A
Sbjct: 146 GIIHRDLKPSNI-VVKSD--ATLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG--------NCGEDCGWQRGE 364
PE++ GY + D+WS+GV++ ++ G F G E G E
Sbjct: 194 PEVILGM------GYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 365 TCHACQEILFHSIQQ----GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDAR 409
Q + ++ Y F + E + + + +A+DL+ ++LV DA
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 410 KRLSAASVLKHPWIST 425
KR+S L+HP+I+
Sbjct: 308 KRISVDEALQHPYINV 323
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 18/93 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI V D + +K+ DF L T+ S + TP ++T + AP
Sbjct: 147 IIHRDLKPSNI-VVKSD--ATLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRAP 194
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG 219
E++ GY + D+WS+GV++ ++ G
Sbjct: 195 EVILGM------GYKENVDIWSVGVIMGEMIKG 221
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 61/216 (28%)
Query: 55 ILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQL 111
LGKG +A + T+ +A KI+ K L H R ++ E+ + H H +++
Sbjct: 46 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI-SIHRSLAHQHVVGF 104
Query: 112 LEYYEDD----------------ENHERHK------------------------RIAHRD 131
++ED+ E H+R K R+ HRD
Sbjct: 105 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 164
Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
LK N+ ++ VK+ DF L + ++++ L G+ ++APE+++
Sbjct: 165 LKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLC--------GTPNYIAPEVLSK 213
Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
G+ D+WS+G ++Y LL G PPF +C
Sbjct: 214 ------KGHSFEVDVWSIGCIMYTLLVGKPPFETSC 243
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 36/185 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ + HRDLK N+ ++ VK+ DF L + ++++ L G+ +
Sbjct: 157 RNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLC--------GTPNY 205
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE+++ G+ D+WS+G ++Y LL G PPF +C ++
Sbjct: 206 IAPEVLSK------KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------------ 247
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
+ I++ Y P+ I+ A LI+++L D R + +L + ++
Sbjct: 248 ---YLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 300
Query: 431 RPLVT 435
R +T
Sbjct: 301 RLPIT 305
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 74/172 (43%), Gaps = 31/172 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRD+KP NIL D+ +KLCDF + + V S T G +MAP
Sbjct: 147 IIHRDIKPSNILL---DRSGNIKLCDFGISGQL-----VDSIAKT----RDAGCRPYMAP 194
Query: 314 EIVNAFMGPEAS--GYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
E ++ P AS GYD R D+WSLG+ +Y L G P+ W ++ +
Sbjct: 195 ERID----PSASRQGYDVRSDVWSLGITLYELATGRFPY-------PKW------NSVFD 237
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
L ++ E S + + L KD KR +LKHP+I
Sbjct: 238 QLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 55/107 (51%), Gaps = 19/107 (17%)
Query: 120 NHERHK-RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
NH + +I HRD+KP NIL D+ +KLCDF + + V S T
Sbjct: 139 NHLKENLKIIHRDIKPSNILL---DRSGNIKLCDFGISGQL-----VDSIAKT----RDA 186
Query: 179 GSAEFMAPEIVNAFMGPEAS--GYDKRCDLWSLGVVVYILLCGYPPF 223
G +MAPE ++ P AS GYD R D+WSLG+ +Y L G P+
Sbjct: 187 GCRPYMAPERID----PSASRQGYDVRSDVWSLGITLYELATGRFPY 229
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 167 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 WIST--AGTAHRPLVT 435
W + A RP VT
Sbjct: 263 WYNKPLKKGAKRPRVT 278
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 38/207 (18%)
Query: 228 GEDCGWQRGETCHACQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL 282
E+ QR E ++IL HS QGI HRDLKP NI D+ VK+ DF L
Sbjct: 108 SENLNQQRDEYWRLFRQILEALSYIHS--QGIIHRDLKPMNIFI---DESRNVKIGDFGL 162
Query: 283 GSGIKFNTSV------HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL 336
+ + + + P ++ L + +G+A ++A E+++ Y+++ D++SL
Sbjct: 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG-----TGHYNEKIDMYSL 217
Query: 337 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEA 396
G++ + ++ PF G +R + + SI+ FP
Sbjct: 218 GIIFFEMIY---PF------STGMERVNILKKLRSV---SIE-----FPPDFDDNKMKVE 260
Query: 397 KDLIRRLLVKDARKRLSAASVLKHPWI 423
K +IR L+ D KR A ++L W+
Sbjct: 261 KKIIRLLIDHDPNKRPGARTLLNSGWL 287
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV------HSPLATPLLLTPVGS 180
I HRDLKP NI D+ VK+ DF L + + + + P ++ L + +G+
Sbjct: 137 IIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGT 193
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 221
A ++A E+++ Y+++ D++SLG++ + ++ YP
Sbjct: 194 AMYVATEVLDG-----TGHYNEKIDMYSLGIIFFEMI--YP 227
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 92/207 (44%), Gaps = 38/207 (18%)
Query: 228 GEDCGWQRGETCHACQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL 282
E+ QR E ++IL HS QGI HRDLKP NI D+ VK+ DF L
Sbjct: 108 SENLNQQRDEYWRLFRQILEALSYIHS--QGIIHRDLKPMNIFI---DESRNVKIGDFGL 162
Query: 283 GSGIKFNTSV------HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL 336
+ + + + P ++ L + +G+A ++A E+++ Y+++ D++SL
Sbjct: 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDG-----TGHYNEKIDMYSL 217
Query: 337 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEA 396
G++ + ++ PF G +R + + SI+ FP
Sbjct: 218 GIIFFEMIY---PF------STGMERVNILKKLRSV---SIE-----FPPDFDDNKMKVE 260
Query: 397 KDLIRRLLVKDARKRLSAASVLKHPWI 423
K +IR L+ D KR A ++L W+
Sbjct: 261 KKIIRLLIDHDPNKRPGARTLLNSGWL 287
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 54/101 (53%), Gaps = 16/101 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV------HSPLATPLLLTPVGS 180
I HRDLKP NI D+ VK+ DF L + + + + P ++ L + +G+
Sbjct: 137 IIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGT 193
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 221
A ++A E+++ Y+++ D++SLG++ + ++ YP
Sbjct: 194 AMYVATEVLDG-----TGHYNEKIDMYSLGIIFFEMI--YP 227
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 61/216 (28%)
Query: 55 ILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQL 111
LGKG +A + T+ +A KI+ K L H R ++ E+ + H H +++
Sbjct: 48 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI-SIHRSLAHQHVVGF 106
Query: 112 LEYYEDD----------------ENHERHK------------------------RIAHRD 131
++ED+ E H+R K R+ HRD
Sbjct: 107 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 166
Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
LK N+ ++ VK+ DF L + ++++ L G+ ++APE+++
Sbjct: 167 LKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLC--------GTPNYIAPEVLSK 215
Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
G+ D+WS+G ++Y LL G PPF +C
Sbjct: 216 ------KGHSFEVDVWSIGCIMYTLLVGKPPFETSC 245
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 36/185 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ + HRDLK N+ ++ VK+ DF L + ++++ L G+ +
Sbjct: 159 RNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLC--------GTPNY 207
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE+++ G+ D+WS+G ++Y LL G PPF +C ++
Sbjct: 208 IAPEVLSK------KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------------ 249
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
+ I++ Y P+ I+ A LI+++L D R + +L + ++
Sbjct: 250 ---YLRIKKNEYSIPK----HINPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 302
Query: 431 RPLVT 435
R +T
Sbjct: 303 RLPIT 307
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMXGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 167 XGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 WIST--AGTAHRPLVT 435
W + A RP VT
Sbjct: 263 WYNKPLKKGAKRPRVT 278
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 133 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 180
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 181 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 119 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 167
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 168 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 223 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 263
Query: 422 WIST--AGTAHRPLVT 435
W + A RP VT
Sbjct: 264 WYNKPLKKGAKRPRVT 279
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 90/216 (41%), Gaps = 61/216 (28%)
Query: 55 ILGKGAYASVQTCVNILTELEYAVKIIDK---LPGHSRSRVFKEVETFHHCQGHPNIIQL 111
LGKG +A + T+ +A KI+ K L H R ++ E+ + H H +++
Sbjct: 22 FLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEI-SIHRSLAHQHVVGF 80
Query: 112 LEYYEDD----------------ENHERHK------------------------RIAHRD 131
++ED+ E H+R K R+ HRD
Sbjct: 81 HGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRD 140
Query: 132 LKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNA 191
LK N+ ++ VK+ DF L + ++++ L G+ ++APE+++
Sbjct: 141 LKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLC--------GTPNYIAPEVLSK 189
Query: 192 FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
G+ D+WS+G ++Y LL G PPF +C
Sbjct: 190 ------KGHSFEVDVWSIGCIMYTLLVGKPPFETSC 219
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 81/185 (43%), Gaps = 36/185 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ + HRDLK N+ ++ VK+ DF L + ++++ L G+ +
Sbjct: 133 RNRVIHRDLKLGNLFL---NEDLEVKIGDFGLATKVEYDGERKKVLC--------GTPNY 181
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APE+++ G+ D+WS+G ++Y LL G PPF +C ++
Sbjct: 182 IAPEVLSK------KGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKET------------ 223
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAH 430
+ I++ Y P+ I+ A LI+++L D R + +L + ++
Sbjct: 224 ---YLRIKKNEYSIPKH----INPVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA 276
Query: 431 RPLVT 435
R +T
Sbjct: 277 RLPIT 281
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 167 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 WIST--AGTAHRPLVT 435
W + A RP VT
Sbjct: 263 WYNKPLKKGAKRPRVT 278
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 73/170 (42%), Gaps = 35/170 (20%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRDLKP N+ D VKL DF L + +TS T VG+ +M+P
Sbjct: 137 VLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAK--------TFVGTPYYMSP 185
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E +N Y+++ D+WSLG ++Y L PPF + + E +E
Sbjct: 186 EQMNRM------SYNEKSDIWSLGCLLYELCALMPPF-------TAFSQKELAGKIREGK 232
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
F I + SDE ++I R+L R S +L++P I
Sbjct: 233 FRRIPYRY-----------SDELNEIITRMLNLKDYHRPSVEEILENPLI 271
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 17/97 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+ D VKL DF L + +TS T VG+ +M+P
Sbjct: 137 VLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAK--------TFVGTPYYMSP 185
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E +N Y+++ D+WSLG ++Y L PPF
Sbjct: 186 EQMNRM------SYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMXGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 38/181 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 167 XGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 W 422
W
Sbjct: 263 W 263
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 133 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 180
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 181 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 119 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 167
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 168 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 223 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 263
Query: 422 WIST--AGTAHRPLVT 435
W + A RP VT
Sbjct: 264 WYNKPLKKGAKRPRVT 279
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 133 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 180
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 181 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 119 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 167
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 168 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 223 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 263
Query: 422 WIST--AGTAHRPLVT 435
W + A RP VT
Sbjct: 264 WYNKPLKKGAKRPRVT 279
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 94/213 (44%), Gaps = 49/213 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS--PLAT-----------P 299
G+ HRD+KP NIL + VK+ DF L V + PL+ P
Sbjct: 129 GLLHRDMKPSNILL---NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQP 185
Query: 300 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-- 357
+L V + + APEI+ +G ++ Y K D+WSLG ++ +LCG P F G+ +
Sbjct: 186 ILTDYVATRWYRAPEIL---LG--STKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQL 240
Query: 358 ------CGWQRGETCHACQ----EILFHS------IQQGHYDFPEGEWSTI--------- 392
+ E + Q + + S I+Q + +W +
Sbjct: 241 ERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKAD 300
Query: 393 -SDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
++EA DL+ +LL + KR+SA LKHP++S
Sbjct: 301 CNEEALDLLDKLLQFNPNKRISANDALKHPFVS 333
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/225 (27%), Positives = 89/225 (39%), Gaps = 63/225 (28%)
Query: 56 LGKGAYASVQTCVNILT-ELEYAVKIIDKLPGHSRS-RVFKEVETFHHCQGHPNIIQLLE 113
LGKGAY V ++ T E+ KI D + + R F+E+ GH NI+ LL
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 114 YYEDDENHER-----------------------HKR-----------------IAHRDLK 133
D + + HK+ + HRD+K
Sbjct: 77 VLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMK 136
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS--PLAT-----------PLLLTPVGS 180
P NIL + VK+ DF L V + PL+ P+L V +
Sbjct: 137 PSNILL---NAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVAT 193
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
+ APEI+ +G ++ Y K D+WSLG ++ +LCG P F G
Sbjct: 194 RWYRAPEIL---LG--STKYTKGIDMWSLGCILGEILCGKPIFPG 233
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 133 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 180
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 181 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 119 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 167
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 168 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 223 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 263
Query: 422 WIST--AGTAHRPLVT 435
W + A RP VT
Sbjct: 264 WYNKPLKKGAKRPRVT 279
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 167 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 WIST--AGTAHRPLVT 435
W + A RP VT
Sbjct: 263 WYNKPLKKGAKRPRVT 278
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 79/179 (44%), Gaps = 32/179 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPV-KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
I HRD+K +N+L + S V K+ DF TS P T G+ ++MA
Sbjct: 143 IVHRDIKGDNVLI---NTYSGVLKISDF--------GTSKRLAGINPCTETFTGTLQYMA 191
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
PEI++ GP GY K D+WSLG + + G PPFY + GE A ++
Sbjct: 192 PEIIDK--GPR--GYGKAADIWSLGCTIIEMATGKPPFY---------ELGEPQAAMFKV 238
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
+ H + PE ++S EAK I + D KR A +L ++ + +
Sbjct: 239 GMFKV---HPEIPE----SMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKKK 290
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 87/214 (40%), Gaps = 60/214 (28%)
Query: 55 ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEY 114
+LGKG Y V ++ ++ A+K I + + +E+ H + H NI+Q L
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLK-HKNIVQYLGS 87
Query: 115 YEDD--------------------------ENHER-----------------HKRIAHRD 131
+ ++ +++E+ +I HRD
Sbjct: 88 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRD 147
Query: 132 LKPENILCVHPDQLSPV-KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
+K +N+L + S V K+ DF TS P T G+ ++MAPEI++
Sbjct: 148 IKGDNVLI---NTYSGVLKISDF--------GTSKRLAGINPCTETFTGTLQYMAPEIID 196
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
GP GY K D+WSLG + + G PPFY
Sbjct: 197 K--GPR--GYGKAADIWSLGCTIIEMATGKPPFY 226
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 11 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 70
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 71 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 130
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 131 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 178
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 179 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 224
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 117 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 165
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 166 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 220
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 221 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 261
Query: 422 WIST--AGTAHRPLVT 435
W + A RP VT
Sbjct: 262 WYNKPLKKGAKRPRVT 277
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 38/181 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 167 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 W 422
W
Sbjct: 263 W 263
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 133 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 180
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 181 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 81/193 (41%), Gaps = 40/193 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 119 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 167
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 168 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 223 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 263
Query: 422 WIST--AGTAHRP 432
W + A RP
Sbjct: 264 WYNKPLKKGAKRP 276
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 38/181 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 167 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 W 422
W
Sbjct: 263 W 263
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 72/173 (41%), Gaps = 40/173 (23%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRDLKPEN+L D K+ DF L + + L GS + AP
Sbjct: 132 VVHRDLKPENVLL---DAHMNAKIADFGLSNMMS---------DGEFLRDSCGSPNYAAP 179
Query: 314 EIVNA--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
E+++ + GPE D+WS GV++Y LLCG PF + H
Sbjct: 180 EVISGRLYAGPEV-------DIWSCGVILYALLCGTLPF-------------DDEHV--P 217
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
LF I+ G + PE ++ L+ +L D KR + + +H W
Sbjct: 218 TLFKKIRGGVFYIPE----YLNRSVATLLMHMLQVDPLKRATIKDIREHEWFK 266
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 90/216 (41%), Gaps = 65/216 (30%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSR---SRVFKEVETFHHCQGHPNII 109
G+ LG G + V+ + LT + AVKI+++ S ++ +E++ + HP+II
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFR-HPHII 74
Query: 110 QL-------------LEYYEDDENHE---RHKRI------------------------AH 129
+L +EY E + +H R+ H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVH 134
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RDLKPEN+L D K+ DF L + + L GS + APE++
Sbjct: 135 RDLKPENVLL---DAHMNAKIADFGLSNMMS---------DGEFLRDSCGSPNYAAPEVI 182
Query: 190 NA--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ + GPE D+WS GV++Y LLCG PF
Sbjct: 183 SGRLYAGPEV-------DIWSCGVILYALLCGTLPF 211
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 72
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 133 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 180
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 181 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 38/181 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 119 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 167
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 168 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 223 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 263
Query: 422 W 422
W
Sbjct: 264 W 264
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 38/181 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 167 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 W 422
W
Sbjct: 263 W 263
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 38/181 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 167 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 W 422
W
Sbjct: 263 W 263
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/188 (30%), Positives = 84/188 (44%), Gaps = 46/188 (24%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVHS- 294
CHA Q + HRDLK EN L SP +K+C F G ++ +HS
Sbjct: 131 CHAMQ----------VCHRDLKLENTLL----DGSPAPRLKICAF----GYSKSSVLHSQ 172
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 354
P T VG+ ++APE++ + E G K D+WS GV +Y++L G PF +
Sbjct: 173 PKDT------VGTPAYIAPEVL---LKKEYDG--KVADVWSCGVTLYVMLVGAYPF-EDP 220
Query: 355 GEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA 414
E +++ H I Y P+ + IS E + LI R+ V D KR+S
Sbjct: 221 EEPKNFRK----------TIHRILNVQYAIPD--YVHISPECRHLISRIFVADPAKRISI 268
Query: 415 ASVLKHPW 422
+ H W
Sbjct: 269 PEIRNHEW 276
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 23/102 (22%)
Query: 126 RIAHRDLKPENILCVHPDQLSP---VKLCDFDLGSGIKFNTSVHS-PLATPLLLTPVGSA 181
++ HRDLK EN L SP +K+C F G ++ +HS P T VG+
Sbjct: 135 QVCHRDLKLENTLL----DGSPAPRLKICAF----GYSKSSVLHSQPKDT------VGTP 180
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
++APE++ + E G K D+WS GV +Y++L G PF
Sbjct: 181 AYIAPEVL---LKKEYDG--KVADVWSCGVTLYVMLVGAYPF 217
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 72/170 (42%), Gaps = 35/170 (20%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRDLKP N+ D VKL DF L + +TS VG+ +M+P
Sbjct: 137 VLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAKAF--------VGTPYYMSP 185
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E +N Y+++ D+WSLG ++Y L PPF + + E +E
Sbjct: 186 EQMNRM------SYNEKSDIWSLGCLLYELCALMPPF-------TAFSQKELAGKIREGK 232
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
F I + SDE ++I R+L R S +L++P I
Sbjct: 233 FRRIPYRY-----------SDELNEIITRMLNLKDYHRPSVEEILENPLI 271
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 17/97 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+ D VKL DF L + +TS VG+ +M+P
Sbjct: 137 VLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDTSFAKAF--------VGTPYYMSP 185
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E +N Y+++ D+WSLG ++Y L PPF
Sbjct: 186 EQMNRM------SYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 92/228 (40%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 13 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYG 72
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 73 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 132
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 133 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 180
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 181 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 226
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 38/181 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 119 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 167
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 168 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 222
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 223 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 263
Query: 422 W 422
W
Sbjct: 264 W 264
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 90/225 (40%), Gaps = 66/225 (29%)
Query: 49 YRLKGEILGKGAYASVQTCVNILTELEYAVK---IIDKLPGHSRSRVFKEVETFHHCQGH 105
+R++ +I G+G ++ V +L + A+K I D + +R+ KE++ H
Sbjct: 34 FRIEKKI-GRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQL-NH 91
Query: 106 PNIIQLL-EYYEDDE-------------------------------------------NH 121
PN+I+ + ED+E H
Sbjct: 92 PNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEH 151
Query: 122 ERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
+R+ HRD+KP N+ VKL D LG T+ L VG+
Sbjct: 152 MHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFSSKTTAAHSL--------VGTP 200
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+M+PE ++ +GY+ + D+WSLG ++Y + PFYG+
Sbjct: 201 YYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGD 239
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 17/108 (15%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
L H + + HRD+KP N+ VKL D LG T+ L V
Sbjct: 149 LEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLGLGRFFSSKTTAAHSL--------V 197
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
G+ +M+PE ++ +GY+ + D+WSLG ++Y + PFYG+
Sbjct: 198 GTPYYMSPERIHE------NGYNFKSDIWSLGCLLYEMAALQSPFYGD 239
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 83/196 (42%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ +C E W+
Sbjct: 167 CGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 WIST--AGTAHRPLVT 435
W + A RP VT
Sbjct: 263 WYNKPLKKGAKRPRVT 278
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 91/228 (39%), Gaps = 57/228 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GA VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 12 QTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMCGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQRGET 238
+ + D+WS G+V+ +L G P+ +C E W+ +T
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT 225
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 90/216 (41%), Gaps = 65/216 (30%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVETFHHCQGHPNII 109
G+ LG G + V+ + LT + AVKI+++ S ++ +E++ + HP+II
Sbjct: 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFR-HPHII 79
Query: 110 QL-------------LEYYED-------------DENHER-------------HKR-IAH 129
+L +EY DE R H+ + H
Sbjct: 80 KLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVH 139
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RDLKPEN+L D K+ DF L + + L GS + APE++
Sbjct: 140 RDLKPENVLL---DAHMNAKIADFGLSNMMS---------DGEFLRXSCGSPNYAAPEVI 187
Query: 190 NA--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ + GPE D+WS GV++Y LLCG PF
Sbjct: 188 SGRLYAGPEV-------DIWSSGVILYALLCGTLPF 216
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 72/173 (41%), Gaps = 40/173 (23%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRDLKPEN+L D K+ DF L + + L GS + AP
Sbjct: 137 VVHRDLKPENVLL---DAHMNAKIADFGLSNMMS---------DGEFLRXSCGSPNYAAP 184
Query: 314 EIVNA--FMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
E+++ + GPE D+WS GV++Y LLCG PF + H
Sbjct: 185 EVISGRLYAGPEV-------DIWSSGVILYALLCGTLPF-------------DDDHV--P 222
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
LF I G + P+ ++ L++ +L D KR + + +H W
Sbjct: 223 TLFKKICDGIFYTPQ----YLNPSVISLLKHMLQVDPMKRATIKDIREHEWFK 271
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 75/166 (45%), Gaps = 32/166 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPV-KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
I HRD+K +N+L + S V K+ DF TS P T G+ ++MA
Sbjct: 129 IVHRDIKGDNVLI---NTYSGVLKISDF--------GTSKRLAGINPCTETFTGTLQYMA 177
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
PEI++ GP GY K D+WSLG + + G PPFY + GE A ++
Sbjct: 178 PEIIDK--GPR--GYGKAADIWSLGCTIIEMATGKPPFY---------ELGEPQAAMFKV 224
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVL 418
+ H + PE ++S EAK I + D KR A +L
Sbjct: 225 GMFKV---HPEIPE----SMSAEAKAFILKCFEPDPDKRACANDLL 263
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 87/214 (40%), Gaps = 60/214 (28%)
Query: 55 ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEY 114
+LGKG Y V ++ ++ A+K I + + +E+ H + H NI+Q L
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLK-HKNIVQYLGS 73
Query: 115 YEDD--------------------------ENHER-----------------HKRIAHRD 131
+ ++ +++E+ +I HRD
Sbjct: 74 FSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRD 133
Query: 132 LKPENILCVHPDQLSPV-KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
+K +N+L + S V K+ DF TS P T G+ ++MAPEI++
Sbjct: 134 IKGDNVLI---NTYSGVLKISDF--------GTSKRLAGINPCTETFTGTLQYMAPEIID 182
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
GP GY K D+WSLG + + G PPFY
Sbjct: 183 K--GPR--GYGKAADIWSLGCTIIEMATGKPPFY 212
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 87/196 (44%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L T+ + + TP ++T + A
Sbjct: 146 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTACTNFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN--------CGEDCGWQRGE 364
PE++ GY D+WS+G ++ L+ G F G E G E
Sbjct: 194 PEVILGM------GYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPSAE 247
Query: 365 TCHACQEILFHSIQQG-------------HYDFP-EGEWSTI-SDEAKDLIRRLLVKDAR 409
A Q + + ++ + FP E E I + +A+DL+ ++LV D
Sbjct: 248 FMAALQPTVRNYVENRPKYPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVIDPD 307
Query: 410 KRLSAASVLKHPWIST 425
KR+S L+HP+I+
Sbjct: 308 KRISVDEALRHPYITV 323
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 18/100 (18%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI+ V D +K+ DF L T+ + + TP ++T + AP
Sbjct: 147 IIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTACTNFMMTPYVVTRY----YRAP 194
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
E++ GY D+WS+G ++ L+ G F G
Sbjct: 195 EVILGM------GYAANVDIWSVGCIMGELVKGCVIFQGT 228
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 84/188 (44%), Gaps = 32/188 (17%)
Query: 239 CHACQEILF---HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
+ C+EIL H Q + HRD+K +N+L + + VKL DF + + + +
Sbjct: 132 AYICREILRGLSHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVGRRN- 187
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
T +G+ +MAPE++ P+A+ YD + DLWSLG+ + G PP C
Sbjct: 188 -------TFIGTPYWMAPEVIACDENPDAT-YDFKSDLWSLGITAIEMAEGAPPL---C- 235
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA 415
H + LF + +WS + + I LVK+ +R +
Sbjct: 236 ---------DMHPMR-ALFLIPRNPAPRLKSKKWSK---KFQSFIESCLVKNHSQRPATE 282
Query: 416 SVLKHPWI 423
++KHP+I
Sbjct: 283 QLMKHPFI 290
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
+H ++ HRD+K +N+L + + VKL DF + + + + T +G
Sbjct: 143 SHLHQHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVGRRN--------TFIG 191
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ +MAPE++ P+A+ YD + DLWSLG+ + G PP
Sbjct: 192 TPYWMAPEVIACDENPDAT-YDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 43/197 (21%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + A
Sbjct: 151 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 198
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-----QRGETCH 367
PE++ GY + DLWS+G ++ ++C F G D W Q G C
Sbjct: 199 PEVILGM------GYKENVDLWSVGCIMGEMVCHKILFPGRDYID-QWNKVIEQLGTPCP 251
Query: 368 ACQEILFHSIQQ--------GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDA 408
+ L +++ Y F + E + + + +A+DL+ ++LV DA
Sbjct: 252 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 311
Query: 409 RKRLSAASVLKHPWIST 425
KR+S L+HP+I+
Sbjct: 312 SKRISVDEALQHPYINV 328
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 91/223 (40%), Gaps = 67/223 (30%)
Query: 43 SCFQDLYRLKG-EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVET 98
S F L R + + +G GA V + + E A+K + + P +++ R ++E+
Sbjct: 23 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYREL-V 80
Query: 99 FHHCQGHPNIIQLL---------EYYED--------DEN----------HERHKR----- 126
C H NII LL E ++D D N HER
Sbjct: 81 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 140
Query: 127 -----------IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
I HRDLKP NI+ V D +K+ DF L T+ S + TP ++
Sbjct: 141 LCGIKHLHSAGIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVV 192
Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
T + APE++ GY + DLWS+G ++ ++C
Sbjct: 193 TRY----YRAPEVILGM------GYKENVDLWSVGCIMGEMVC 225
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 48/210 (22%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+GI +RDLK +N+L H KL DF + GI + + TP ++
Sbjct: 143 KGIIYRDLKLDNVLLDHEGH---CKLADFGMCKEGICNGVTTATFCGTP---------DY 190
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
+APEI+ + Y D W++GV++Y +LCG+ PF +D
Sbjct: 191 IAPEILQEML------YGPAVDWWAMGVLLYEMLCGHAPFEAENEDD------------- 231
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS------VLKHPW-- 422
LF +I +P + + ++A +++ + K+ RL + + +L+HP+
Sbjct: 232 --LFEAILNDEVVYP----TWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFK 285
Query: 423 -ISTAGTAHRPLVTPQVIRRNQSARELSSF 451
I A HR + P R +S ++S+F
Sbjct: 286 EIDWAQLNHRQ-IEPPFRPRIKSREDVSNF 314
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 62/144 (43%), Gaps = 29/144 (20%)
Query: 88 SRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSP 147
+SR F E + II L + D K I +RDLK +N+L H
Sbjct: 116 QKSRRFDEARARFYAA---EIISALMFLHD-------KGIIYRDLKLDNVLLDHEGH--- 162
Query: 148 VKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDL 206
KL DF + GI + + TP +++APEI+ + Y D
Sbjct: 163 CKLADFGMCKEGICNGVTTATFCGTP---------DYIAPEILQEML------YGPAVDW 207
Query: 207 WSLGVVVYILLCGYPPFYGNCGED 230
W++GV++Y +LCG+ PF +D
Sbjct: 208 WAMGVLLYEMLCGHAPFEAENEDD 231
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 90/197 (45%), Gaps = 43/197 (21%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + A
Sbjct: 140 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 187
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-----QRGETCH 367
PE++ GY + DLWS+G ++ ++C F G D W Q G C
Sbjct: 188 PEVILGM------GYKENVDLWSVGCIMGEMVCHKILFPGRDYID-QWNKVIEQLGTPCP 240
Query: 368 ACQEILFHSIQQ--------GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDA 408
+ L +++ Y F + E + + + +A+DL+ ++LV DA
Sbjct: 241 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 300
Query: 409 RKRLSAASVLKHPWIST 425
KR+S L+HP+I+
Sbjct: 301 SKRISVDEALQHPYINV 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 91/223 (40%), Gaps = 67/223 (30%)
Query: 43 SCFQDLYRLKG-EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVET 98
S F L R + + +G GA V + + E A+K + + P +++ R ++E+
Sbjct: 12 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYREL-V 69
Query: 99 FHHCQGHPNIIQLL---------EYYED--------DEN----------HERHKR----- 126
C H NII LL E ++D D N HER
Sbjct: 70 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 129
Query: 127 -----------IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
I HRDLKP NI+ V D +K+ DF L T+ S + TP ++
Sbjct: 130 LCGIKHLHSAGIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVV 181
Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
T + APE++ GY + DLWS+G ++ ++C
Sbjct: 182 TRY----YRAPEVILGM------GYKENVDLWSVGCIMGEMVC 214
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 81/195 (41%), Gaps = 41/195 (21%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+Q + HRDLKP+N+L ++ +KL DF L T + L P
Sbjct: 118 RQKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTYDNEVVTLWYRP------ 168
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
P+I+ +G ++ Y + D+W +G + Y + G P F G+ E E H
Sbjct: 169 --PDIL---LG--STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVE-------EQLHFIF 214
Query: 371 EILFHSIQQ-----------GHYDFPEGEWSTI-------SDEAKDLIRRLLVKDARKRL 412
IL ++ Y++P+ + + DL+ +LL + R R+
Sbjct: 215 RILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRI 274
Query: 413 SAASVLKHPWISTAG 427
SA +KHP+ + G
Sbjct: 275 SAEDAMKHPFFLSLG 289
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 50/106 (47%), Gaps = 16/106 (15%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
+++ HRDLKP+N+L ++ +KL DF L T + L P
Sbjct: 119 QKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTYDNEVVTLWYRP------- 168
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
P+I+ +G ++ Y + D+W +G + Y + G P F G+ E+
Sbjct: 169 -PDIL---LG--STDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEE 208
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI V D + +K+ DF L T+ S + TP ++T + A
Sbjct: 146 GIIHRDLKPSNI-VVKSD--ATLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG--------NCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ ++ G F G E G E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 365 TCHACQEILFHSIQQ----GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDAR 409
Q + ++ Y F + E + + + +A+DL+ ++LV DA
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 410 KRLSAASVLKHPWIST 425
KR+S L+HP+I+
Sbjct: 308 KRISVDEALQHPYINV 323
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 47/93 (50%), Gaps = 18/93 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI V D + +K+ DF L T+ S + TP ++T + AP
Sbjct: 147 IIHRDLKPSNI-VVKSD--ATLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRAP 194
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG 219
E++ GY + D+WS+G ++ ++ G
Sbjct: 195 EVILGM------GYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D + +K+ DF L T+ S + TP ++T + A
Sbjct: 146 GIIHRDLKPSNIV-VKSD--ATLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG--------NCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ ++ G F G E G E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 365 TCHACQEILFHSIQQ----GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDAR 409
Q + ++ Y F + E + + + +A+DL+ ++LV DA
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 410 KRLSAASVLKHPWIST 425
KR+S L+HP+I+
Sbjct: 308 KRISVDEALQHPYINV 323
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 18/99 (18%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI+ V D + +K+ DF L T+ S + TP ++T + AP
Sbjct: 147 IIHRDLKPSNIV-VKSD--ATLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRAP 194
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
E++ GY + D+WS+G ++ ++ G F G
Sbjct: 195 EVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPG 227
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D + +K+ DF L T+ S + TP ++T + A
Sbjct: 146 GIIHRDLKPSNIV-VKSD--ATLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG--------NCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ ++ G F G E G E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 365 TCHACQEILFHSIQQ----GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDAR 409
Q + ++ Y F + E + + + +A+DL+ ++LV DA
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 410 KRLSAASVLKHPWIST 425
KR+S L+HP+I+
Sbjct: 308 KRISVDEALQHPYINV 323
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 94/230 (40%), Gaps = 67/230 (29%)
Query: 43 SCFQDLYRLKG-EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVET 98
S F L R + + +G GA V + + E A+K + + P +++ R ++E+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYREL-V 75
Query: 99 FHHCQGHPNIIQLL---------EYYED--------DEN----------HERHKR----- 126
C H NII LL E ++D D N HER
Sbjct: 76 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 127 -----------IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
I HRDLKP NI+ V D + +K+ DF L T+ S + TP ++
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIV-VKSD--ATLKILDFGLA-----RTAGTSFMMTPYVV 187
Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
T + APE++ GY + D+WS+G ++ ++ G F G
Sbjct: 188 TRY----YRAPEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPG 227
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 87/201 (43%), Gaps = 51/201 (25%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L G++ M
Sbjct: 146 GIIHRDLKPSNIV-VKSD--CTLKILDFGLART-------------------AGTSFMME 183
Query: 313 PEIVNAFM-GPEA---SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-----QRG 363
PE+V + PE GY + D+WS+G ++ ++C F G D W Q G
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYID-QWNKVIEQLG 242
Query: 364 ETCHACQEILFHSIQQ--------GHYDF----------PEGEWSTI-SDEAKDLIRRLL 404
C A + L +++ Y F + E + + + +A+DL+ ++L
Sbjct: 243 TPCPAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 302
Query: 405 VKDARKRLSAASVLKHPWIST 425
V DA KR+S L+HP+I+
Sbjct: 303 VIDASKRISVDEALQHPYINV 323
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 97/257 (37%), Gaps = 80/257 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVETFHHCQGHPNIIQLL 112
+G GA V + + E A+K + + P +++ R ++E+ C H NII LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYREL-VLMKCVNHKNIIGLL 89
Query: 113 ---------EYYED--------DEN----------HERHKR----------------IAH 129
E ++D D N HER I H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RDLKP NI+ V D +K+ DF L G++ M PE+V
Sbjct: 150 RDLKPSNIV-VKSD--CTLKILDFGLART-------------------AGTSFMMEPEVV 187
Query: 190 NAFM-GPEA---SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-----QRGETCH 240
+ PE GY + D+WS+G ++ ++C F G D W Q G C
Sbjct: 188 TRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYID-QWNKVIEQLGTPCP 246
Query: 241 ACQEILFHSIQQGIAHR 257
A + L +++ + +R
Sbjct: 247 AFMKKLQPTVRNYVENR 263
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 85/210 (40%), Gaps = 54/210 (25%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQL-- 111
+ LG+GAY VQ VN +TE AVKI+D K+ + H N+++
Sbjct: 12 QTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYG 71
Query: 112 -----------LEYYEDDENHER----------------HKRIA-----------HRDLK 133
LEY E +R H+ +A HRD+K
Sbjct: 72 HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIK 131
Query: 134 PENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFM 193
PEN+L D L K+ DF L + ++N LL G+ ++APE++
Sbjct: 132 PENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKMXGTLPYVAPELLK--- 179
Query: 194 GPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ + D+WS G+V+ +L G P+
Sbjct: 180 --RREFHAEPVDVWSCGIVLTAMLAGELPW 207
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 82/196 (41%), Gaps = 40/196 (20%)
Query: 245 ILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 304
+ H I GI HRD+KPEN+L D L K+ DF L + ++N LL
Sbjct: 118 VYLHGI--GITHRDIKPENLLLDERDNL---KISDFGLATVFRYNNRER------LLNKM 166
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF---YGNCGEDCGWQ 361
G+ ++APE++ + + D+WS G+V+ +L G P+ + E W+
Sbjct: 167 XGTLPYVAPELLK-----RREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWK 221
Query: 362 RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+T Y P W I L+ ++LV++ R++ + K
Sbjct: 222 EKKT----------------YLNP---WKKIDSAPLALLHKILVENPSARITIPDIKKDR 262
Query: 422 WIST--AGTAHRPLVT 435
W + A RP VT
Sbjct: 263 WYNKPLKKGAKRPRVT 278
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 84/218 (38%), Gaps = 55/218 (25%)
Query: 46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
+D + + GE LG GA+ V N T + A K+ID E++ C H
Sbjct: 36 EDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD-H 93
Query: 106 PNIIQLLE--YYE---------------------------------------DDENHERH 124
PNI++LL+ YYE D N+
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
+I HRDLK NIL +KL DF G K ++ + +G+ +M
Sbjct: 154 NKIIHRDLKAGNILFTLD---GDIKLADF--GVSAKNTRTIQRRDSF------IGTPYWM 202
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
APE+V + YD + D+WSLG+ + + PP
Sbjct: 203 APEVVMCETSKDRP-YDYKADVWSLGITLIEMAEIEPP 239
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 77/188 (40%), Gaps = 28/188 (14%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLA 297
C + L + I HRDLK NIL +KL DF G K ++ +
Sbjct: 140 VCKQTLDALNYLHDNKIIHRDLKAGNILFTLD---GDIKLADF--GVSAKNTRTIQRRDS 194
Query: 298 TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
+G+ +MAPE+V + YD + D+WSLG+ + + PP +
Sbjct: 195 F------IGTPYWMAPEVVMCETSKDRP-YDYKADVWSLGITLIEMAEIEPPHH------ 241
Query: 358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASV 417
+ + +L + + WS+ KD +++ L K+ R + + +
Sbjct: 242 -------ELNPMRVLLKIAKSEPPTLAQPSRWSS---NFKDFLKKCLEKNVDARWTTSQL 291
Query: 418 LKHPWIST 425
L+HP+++
Sbjct: 292 LQHPFVTV 299
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 39/200 (19%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
W+R E + Q GI H DLKP N L V +KL DF + + ++ +T+
Sbjct: 155 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT- 209
Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGY 347
+ + + VG+ +M PE + +G K D+WSLG ++Y + G
Sbjct: 210 -----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
Query: 348 PPFYGNCGEDCGWQRGETCHAC----QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL 403
PF + HA EI F D PE + +D+++
Sbjct: 265 TPFQQIINQIS------KLHAIIDPNHEIEFP-------DIPE-------KDLQDVLKCC 304
Query: 404 LVKDARKRLSAASVLKHPWI 423
L +D ++R+S +L HP++
Sbjct: 305 LKRDPKQRISIPELLAHPYV 324
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I H DLKP N L V +KL DF + + ++ +T+ + + + VG+ +M P
Sbjct: 176 IVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT------SVVKDSQVGTVNYMPP 225
Query: 187 EIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGYPPF 223
E + +G K D+WSLG ++Y + G PF
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 39/200 (19%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
W+R E + Q GI H DLKP N L V +KL DF + + ++ +T+
Sbjct: 108 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT- 162
Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGY 347
+ + + VG+ +M PE + +G K D+WSLG ++Y + G
Sbjct: 163 -----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 217
Query: 348 PPFYGNCGEDCGWQRGETCHAC----QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL 403
PF + HA EI F D PE + +D+++
Sbjct: 218 TPFQQIINQIS------KLHAIIDPNHEIEFP-------DIPE-------KDLQDVLKCC 257
Query: 404 LVKDARKRLSAASVLKHPWI 423
L +D ++R+S +L HP++
Sbjct: 258 LKRDPKQRISIPELLAHPYV 277
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I H DLKP N L V +KL DF + + ++ +T+ + + + VG+ +M P
Sbjct: 129 IVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT------SVVKDSQVGTVNYMPP 178
Query: 187 EIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGYPPF 223
E + +G K D+WSLG ++Y + G PF
Sbjct: 179 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 220
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 39/200 (19%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
W+R E + Q GI H DLKP N L V +KL DF + + ++ +T+
Sbjct: 127 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT- 181
Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGY 347
+ + + VG+ +M PE + +G K D+WSLG ++Y + G
Sbjct: 182 -----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
Query: 348 PPFYGNCGEDCGWQRGETCHAC----QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL 403
PF + HA EI F D PE + +D+++
Sbjct: 237 TPFQQIINQIS------KLHAIIDPNHEIEFP-------DIPEK-------DLQDVLKCC 276
Query: 404 LVKDARKRLSAASVLKHPWI 423
L +D ++R+S +L HP++
Sbjct: 277 LKRDPKQRISIPELLAHPYV 296
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I H DLKP N L V +KL DF + + ++ +T+ + + + VG+ +M P
Sbjct: 148 IVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT------SVVKDSQVGTVNYMPP 197
Query: 187 EIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGYPPF 223
E + +G K D+WSLG ++Y + G PF
Sbjct: 198 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 85/176 (48%), Gaps = 32/176 (18%)
Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS-PLATPLLLTPVG 306
HS+Q I HRDLK EN L + +K+CDF G ++ +HS P +T VG
Sbjct: 133 HSMQ--ICHRDLKLENTL-LDGSPAPRLKICDF----GYSKSSVLHSQPKST------VG 179
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
+ ++APE++ + E G K D+WS GV +Y++L G PF ED R +
Sbjct: 180 TPAYIAPEVL---LRQEYDG--KIADVWSCGVTLYVMLVGAYPF-----EDPEEPR-DYR 228
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPW 422
Q IL S++ Y P+ IS E LI R+ V D R+S + H W
Sbjct: 229 KTIQRIL--SVK---YSIPDD--IRISPECCHLISRIFVADPATRISIPEIKTHSW 277
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 87/209 (41%), Gaps = 59/209 (28%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQ----- 110
+G G + + + LT+ AVK I++ G + + H HPNI++
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIER--GAAIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 111 --------LLEYYEDDENHER---------------------------HKRIAHRDLKPE 135
++EY E +ER +I HRDLK E
Sbjct: 86 LTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLE 145
Query: 136 NILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS-PLATPLLLTPVGSAEFMAPEIVNAFMG 194
N L + +K+CDF G ++ +HS P +T VG+ ++APE++ +
Sbjct: 146 NTL-LDGSPAPRLKICDF----GYSKSSVLHSQPKST------VGTPAYIAPEVL---LR 191
Query: 195 PEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E G K D+WS GV +Y++L G PF
Sbjct: 192 QEYDG--KIADVWSCGVTLYVMLVGAYPF 218
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 39/200 (19%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
W+R E + Q GI H DLKP N L V +KL DF + + ++ +T+
Sbjct: 155 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT- 209
Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGY 347
+ + + VG+ +M PE + +G K D+WSLG ++Y + G
Sbjct: 210 -----SVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
Query: 348 PPFYGNCGEDCGWQRGETCHAC----QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL 403
PF + HA EI F D PE + +D+++
Sbjct: 265 TPFQQIINQIS------KLHAIIDPNHEIEFP-------DIPE-------KDLQDVLKCC 304
Query: 404 LVKDARKRLSAASVLKHPWI 423
L +D ++R+S +L HP++
Sbjct: 305 LKRDPKQRISIPELLAHPYV 324
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I H DLKP N L V +KL DF + + ++ +T+ + + + VG+ +M P
Sbjct: 176 IVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT------SVVKDSQVGAVNYMPP 225
Query: 187 EIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGYPPF 223
E + +G K D+WSLG ++Y + G PF
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 39/200 (19%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
W+R E + Q GI H DLKP N L V +KL DF + + ++ +T+
Sbjct: 111 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT- 165
Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGY 347
+ + + VG+ +M PE + +G K D+WSLG ++Y + G
Sbjct: 166 -----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 220
Query: 348 PPFYGNCGEDCGWQRGETCHAC----QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL 403
PF + HA EI F D PE + +D+++
Sbjct: 221 TPFQQIINQIS------KLHAIIDPNHEIEFP-------DIPE-------KDLQDVLKCC 260
Query: 404 LVKDARKRLSAASVLKHPWI 423
L +D ++R+S +L HP++
Sbjct: 261 LKRDPKQRISIPELLAHPYV 280
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I H DLKP N L V +KL DF + + ++ +T+ + + + VG+ +M P
Sbjct: 132 IVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT------SVVKDSQVGTVNYMPP 181
Query: 187 EIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGYPPF 223
E + +G K D+WSLG ++Y + G PF
Sbjct: 182 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 223
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 39/200 (19%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
W+R E + Q GI H DLKP N L V +KL DF + + ++ +T+
Sbjct: 155 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT- 209
Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGY 347
+ + + VG+ +M PE + +G K D+WSLG ++Y + G
Sbjct: 210 -----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 264
Query: 348 PPFYGNCGEDCGWQRGETCHAC----QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL 403
PF + HA EI F D PE + +D+++
Sbjct: 265 TPFQQIINQIS------KLHAIIDPNHEIEFP-------DIPEK-------DLQDVLKCC 304
Query: 404 LVKDARKRLSAASVLKHPWI 423
L +D ++R+S +L HP++
Sbjct: 305 LKRDPKQRISIPELLAHPYV 324
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I H DLKP N L V +KL DF + + ++ +T+ + + + VG+ +M P
Sbjct: 176 IVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT------SVVKDSQVGTVNYMPP 225
Query: 187 EIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGYPPF 223
E + +G K D+WSLG ++Y + G PF
Sbjct: 226 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 267
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 90/207 (43%), Gaps = 38/207 (18%)
Query: 228 GEDCGWQRGETCHACQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDL 282
E+ QR E ++IL HS QGI HR+LKP NI D+ VK+ DF L
Sbjct: 108 SENLNQQRDEYWRLFRQILEALSYIHS--QGIIHRNLKPXNIFI---DESRNVKIGDFGL 162
Query: 283 GSGIKFNTSV------HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL 336
+ + + + P ++ L + +G+A ++A E+++ Y+++ D +SL
Sbjct: 163 AKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDG-----TGHYNEKIDXYSL 217
Query: 337 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEA 396
G++ + + PF G +R + + SI+ FP
Sbjct: 218 GIIFFEXIY---PF------STGXERVNILKKLRSV---SIE-----FPPDFDDNKXKVE 260
Query: 397 KDLIRRLLVKDARKRLSAASVLKHPWI 423
K +IR L+ D KR A ++L W+
Sbjct: 261 KKIIRLLIDHDPNKRPGARTLLNSGWL 287
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV------HSPLATPLLLTPVGS 180
I HR+LKP NI D+ VK+ DF L + + + + P ++ L + +G+
Sbjct: 137 IIHRNLKPXNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGT 193
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 214
A ++A E+++ Y+++ D +SLG++ +
Sbjct: 194 AXYVATEVLDG-----TGHYNEKIDXYSLGIIFF 222
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/232 (22%), Positives = 91/232 (39%), Gaps = 61/232 (26%)
Query: 40 LVTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETF 99
++ + Y++ + LG G ++V + + ++ A+K I +P + K E
Sbjct: 4 MIGKIINERYKIVDK-LGGGGMSTVYLAEDTILNIKVAIKAI-FIPPREKEETLKRFERE 61
Query: 100 HHCQG---HPNIIQLLEYYEDDE------------------------------------- 119
H H NI+ +++ E+D+
Sbjct: 62 VHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQIL 121
Query: 120 ---NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT 176
H RI HRD+KP+NIL D +K+ DF GI S S T +L
Sbjct: 122 DGIKHAHDMRIVHRDIKPQNILI---DSNKTLKIFDF----GIAKALSETSLTQTNHVL- 173
Query: 177 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
G+ ++ +PE + D+ D++S+G+V+Y +L G PPF G
Sbjct: 174 --GTVQYFSPE------QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA 217
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 16/108 (14%)
Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
H+ I HRD+KP+NIL D +K+ DF GI S S T +L G+
Sbjct: 126 HAHDMRIVHRDIKPQNILI---DSNKTLKIFDF----GIAKALSETSLTQTNHVL---GT 175
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
++ +PE + D+ D++S+G+V+Y +L G PPF G
Sbjct: 176 VQYFSPE------QAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETA 217
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 81/191 (42%), Gaps = 33/191 (17%)
Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPV 305
H Q I HRDLKP+N+L ++ D +KL DF L GI + H V
Sbjct: 134 HCHQHRILHRDLKPQNLL-INSD--GALKLADFGLARAFGIPVRSYTHE----------V 180
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-------- 357
+ + AP+++ MG + Y D+WS+G + ++ G P F G +D
Sbjct: 181 VTLWYRAPDVL---MG--SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSI 235
Query: 358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTIS----DEAKDLIRRLLVKDARKRLS 413
G QE+ Q+ F + WS+I E DL+ +L D KR+S
Sbjct: 236 LGTPNPREWPQVQELPLWK-QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRIS 294
Query: 414 AASVLKHPWIS 424
A + HP+
Sbjct: 295 ARDAMNHPYFK 305
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 20/112 (17%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPV 178
H RI HRDLKP+N+L ++ D +KL DF L GI + H V
Sbjct: 134 HCHQHRILHRDLKPQNLL-INSD--GALKLADFGLARAFGIPVRSYTHE----------V 180
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
+ + AP+++ MG + Y D+WS+G + ++ G P F G +D
Sbjct: 181 VTLWYRAPDVL---MG--SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD 227
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 84/200 (42%), Gaps = 39/200 (19%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
W+R E + Q GI H DLKP N L V +KL DF + + ++ +T+
Sbjct: 107 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT- 161
Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGY 347
+ + + VG+ +M PE + +G K D+WSLG ++Y + G
Sbjct: 162 -----SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 216
Query: 348 PPFYGNCGEDCGWQRGETCHAC----QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL 403
PF + HA EI F D PE + +D+++
Sbjct: 217 TPFQQIINQIS------KLHAIIDPNHEIEFP-------DIPE-------KDLQDVLKCC 256
Query: 404 LVKDARKRLSAASVLKHPWI 423
L +D ++R+S +L HP++
Sbjct: 257 LKRDPKQRISIPELLAHPYV 276
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 15/102 (14%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I H DLKP N L V +KL DF + + ++ +T+ + + + VG+ +M P
Sbjct: 128 IVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDTT------SVVKDSQVGTVNYMPP 177
Query: 187 EIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGYPPF 223
E + +G K D+WSLG ++Y + G PF
Sbjct: 178 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 219
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 43/197 (21%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + A
Sbjct: 146 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-----QRGETCH 367
PE++ GY + D+WS+G ++ ++ G F G D W Q G C
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCP 246
Query: 368 ACQEILFHSIQQ--------GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDA 408
+ L +++ Y F + E + + + +A+DL+ ++LV DA
Sbjct: 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 306
Query: 409 RKRLSAASVLKHPWIST 425
KR+S L+HP+I+
Sbjct: 307 SKRISVDEALQHPYINV 323
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 93/231 (40%), Gaps = 67/231 (29%)
Query: 43 SCFQDLYRLKG-EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVET 98
S F L R + + +G GA V + + E A+K + + P +++ R ++E+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYREL-V 75
Query: 99 FHHCQGHPNIIQLL---------EYYED--------DEN----------HERHKR----- 126
C H NII LL E ++D D N HER
Sbjct: 76 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 127 -----------IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
I HRDLKP NI+ V D +K+ DF L T+ S + TP ++
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVV 187
Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
T + APE++ GY + D+WS+G ++ ++ G F G
Sbjct: 188 TRY----YRAPEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGT 228
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 43/197 (21%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + A
Sbjct: 147 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 194
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-----QRGETCH 367
PE++ GY + D+WS+G ++ ++ G F G D W Q G C
Sbjct: 195 PEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCP 247
Query: 368 ACQEILFHSIQQ--------GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDA 408
+ L +++ Y F + E + + + +A+DL+ ++LV DA
Sbjct: 248 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 307
Query: 409 RKRLSAASVLKHPWIST 425
KR+S L+HP+I+
Sbjct: 308 SKRISVDEALQHPYINV 324
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 93/231 (40%), Gaps = 67/231 (29%)
Query: 43 SCFQDLYRLKG-EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVET 98
S F L R + + +G GA V + + E A+K + + P +++ R ++E+
Sbjct: 19 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYREL-V 76
Query: 99 FHHCQGHPNIIQLL---------EYYED--------DEN----------HERHKR----- 126
C H NII LL E ++D D N HER
Sbjct: 77 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 136
Query: 127 -----------IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
I HRDLKP NI+ V D +K+ DF L T+ S + TP ++
Sbjct: 137 LCGIKHLHSAGIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVV 188
Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
T + APE++ GY + D+WS+G ++ ++ G F G
Sbjct: 189 TRY----YRAPEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGT 229
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 81/191 (42%), Gaps = 33/191 (17%)
Query: 248 HSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPV 305
H Q I HRDLKP+N+L ++ D +KL DF L GI + H V
Sbjct: 134 HCHQHRILHRDLKPQNLL-INSD--GALKLADFGLARAFGIPVRSYTHE----------V 180
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-------- 357
+ + AP+++ MG + Y D+WS+G + ++ G P F G +D
Sbjct: 181 VTLWYRAPDVL---MG--SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSI 235
Query: 358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTIS----DEAKDLIRRLLVKDARKRLS 413
G QE+ Q+ F + WS+I E DL+ +L D KR+S
Sbjct: 236 LGTPNPREWPQVQELPLWK-QRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRIS 294
Query: 414 AASVLKHPWIS 424
A + HP+
Sbjct: 295 ARDAMNHPYFK 305
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 20/112 (17%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPV 178
H RI HRDLKP+N+L ++ D +KL DF L GI + H V
Sbjct: 134 HCHQHRILHRDLKPQNLL-INSD--GALKLADFGLARAFGIPVRSYTHE----------V 180
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
+ + AP+++ MG + Y D+WS+G + ++ G P F G +D
Sbjct: 181 VTLWYRAPDVL---MG--SKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDD 227
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 83/218 (38%), Gaps = 55/218 (25%)
Query: 46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
+D + + GE LG GA+ V N T + A K+ID E++ C H
Sbjct: 36 EDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD-H 93
Query: 106 PNIIQLLE--YYE---------------------------------------DDENHERH 124
PNI++LL+ YYE D N+
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
+I HRDLK NIL +KL DF G K + + +G+ +M
Sbjct: 154 NKIIHRDLKAGNILFTLD---GDIKLADF--GVSAKNTRXIQRRDSF------IGTPYWM 202
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
APE+V + YD + D+WSLG+ + + PP
Sbjct: 203 APEVVMCETSKDRP-YDYKADVWSLGITLIEMAEIEPP 239
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 76/188 (40%), Gaps = 28/188 (14%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLA 297
C + L + I HRDLK NIL +KL DF G K + +
Sbjct: 140 VCKQTLDALNYLHDNKIIHRDLKAGNILFTLD---GDIKLADF--GVSAKNTRXIQRRDS 194
Query: 298 TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
+G+ +MAPE+V + YD + D+WSLG+ + + PP +
Sbjct: 195 F------IGTPYWMAPEVVMCETSKDRP-YDYKADVWSLGITLIEMAEIEPPHH------ 241
Query: 358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASV 417
+ + +L + + WS+ KD +++ L K+ R + + +
Sbjct: 242 -------ELNPMRVLLKIAKSEPPTLAQPSRWSS---NFKDFLKKCLEKNVDARWTTSQL 291
Query: 418 LKHPWIST 425
L+HP+++
Sbjct: 292 LQHPFVTV 299
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 88/198 (44%), Gaps = 45/198 (22%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP-VGSAEFM 311
GI HRDLKP NI+ V D +K+ DF L T ++TP V + +
Sbjct: 146 GIIHRDLKPSNIV-VKSD--CTLKILDFGLARTA----------GTSFMMTPEVVTRYYR 192
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-----QRGETC 366
APE++ GY + D+WS+G ++ ++ G F G D W Q G C
Sbjct: 193 APEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPC 245
Query: 367 HACQEILFHSIQQ--------GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKD 407
+ L +++ Y F + E + + + +A+DL+ ++LV D
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKMLVID 305
Query: 408 ARKRLSAASVLKHPWIST 425
A KR+S L+HP+I+
Sbjct: 306 ASKRISVDEALQHPYINV 323
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 91/232 (39%), Gaps = 69/232 (29%)
Query: 43 SCFQDLYRLKG-EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVET 98
S F L R + + +G GA V + + E A+K + + P +++ R ++E+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYREL-V 75
Query: 99 FHHCQGHPNIIQLL---------EYYED--------DEN----------HERHKR----- 126
C H NII LL E ++D D N HER
Sbjct: 76 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 127 -----------IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
I HRDLKP NI+ V D +K+ DF L T ++
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIV-VKSD--CTLKILDFGLARTA----------GTSFMM 182
Query: 176 TP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
TP V + + APE++ GY + D+WS+G ++ ++ G F G
Sbjct: 183 TPEVVTRYYRAPEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGT 228
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 32/172 (18%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
QGI H+D+KP N+L L S + ++H A T GS F
Sbjct: 128 QGIVHKDIKPGNLLLTTGGTLKI---------SALGVAEALHPFAADDTCRTSQGSPAFQ 178
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
PEI N SG+ + D+WS GV +Y + G PF G+ +
Sbjct: 179 PPEIANGL--DTFSGF--KVDIWSAGVTLYNITTGLYPF-----------EGDNIYK--- 220
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
LF +I +G Y P +S DL++ +L + KR S + +H W
Sbjct: 221 -LFENIGKGSYAIPGDCGPPLS----DLLKGMLEYEPAKRFSIRQIRQHSWF 267
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 87/223 (39%), Gaps = 61/223 (27%)
Query: 51 LKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPG----HSRSRVFKEVETFHHCQGHP 106
L G++LG+G+Y V+ ++ T AVKI+ K + + V KE++ + H
Sbjct: 8 LMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR-HK 66
Query: 107 NIIQLLEYYEDDENHERH-------------------KR--------------------- 126
N+IQL++ ++E + + KR
Sbjct: 67 NVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLH 126
Query: 127 ---IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
I H+D+KP N+L L S + ++H A T GS F
Sbjct: 127 SQGIVHKDIKPGNLLLTTGGTLKI---------SALGVAEALHPFAADDTCRTSQGSPAF 177
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
PEI N SG+ + D+WS GV +Y + G PF G+
Sbjct: 178 QPPEIANGL--DTFSGF--KVDIWSAGVTLYNITTGLYPFEGD 216
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 86/201 (42%), Gaps = 51/201 (25%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L G++ M
Sbjct: 146 GIIHRDLKPSNIV-VKSD--CTLKILDFGLART-------------------AGTSFMME 183
Query: 313 PEIVNAFM-GPEA---SGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-----QRG 363
PE+V + PE GY + DLWS+G ++ ++C F G D W Q G
Sbjct: 184 PEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYID-QWNKVIEQLG 242
Query: 364 ETCHACQEILFHSIQQ--------GHYDF----------PEGEWSTI-SDEAKDLIRRLL 404
C + L +++ Y F + E + + + +A+DL+ ++L
Sbjct: 243 TPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKML 302
Query: 405 VKDARKRLSAASVLKHPWIST 425
V DA KR+S L+HP+I+
Sbjct: 303 VIDASKRISVDEALQHPYINV 323
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 81/213 (38%), Gaps = 74/213 (34%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVETFHHCQGHPNIIQLL 112
+G GA V + + E A+K + + P +++ R ++E+ C H NII LL
Sbjct: 32 IGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYREL-VLMKCVNHKNIIGLL 89
Query: 113 ---------EYYED--------DEN----------HERHKR----------------IAH 129
E ++D D N HER I H
Sbjct: 90 NVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIH 149
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RDLKP NI+ V D +K+ DF L G++ M PE+V
Sbjct: 150 RDLKPSNIV-VKSD--CTLKILDFGLART-------------------AGTSFMMEPEVV 187
Query: 190 NAFM-GPEA---SGYDKRCDLWSLGVVVYILLC 218
+ PE GY + DLWS+G ++ ++C
Sbjct: 188 TRYYRAPEVILGMGYKENVDLWSVGCIMGEMVC 220
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + A
Sbjct: 146 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG--------NCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ ++ G F G E G E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 365 TCHACQEILFHSIQQ----GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDAR 409
Q + ++ Y F + E + + + +A+DL+ ++LV DA
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 410 KRLSAASVLKHPWIST 425
KR+S L+HP+I+
Sbjct: 308 KRISVDEALQHPYINV 323
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 93/231 (40%), Gaps = 67/231 (29%)
Query: 43 SCFQDLYRLKG-EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVET 98
S F L R + + +G GA V + + E A+K + + P +++ R ++E+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYREL-V 75
Query: 99 FHHCQGHPNIIQLL---------EYYED--------DEN----------HERHKR----- 126
C H NII LL E ++D D N HER
Sbjct: 76 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVIQMELDHERMSYLLYQM 135
Query: 127 -----------IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
I HRDLKP NI+ V D +K+ DF L T+ S + TP ++
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVV 187
Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
T + APE++ GY + D+WS+G ++ ++ G F G
Sbjct: 188 TRY----YRAPEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGT 228
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + A
Sbjct: 146 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG--------NCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ ++ G F G E G E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPSPE 247
Query: 365 TCHACQEILFHSIQQ----GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDAR 409
Q + ++ Y F + E + + + +A+DL+ ++LV DA
Sbjct: 248 FMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDAS 307
Query: 410 KRLSAASVLKHPWIST 425
KR+S L+HP+I+
Sbjct: 308 KRISVDEALQHPYINV 323
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 93/231 (40%), Gaps = 67/231 (29%)
Query: 43 SCFQDLYRLKG-EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVET 98
S F L R + + +G GA V + + E A+K + + P +++ R ++E+
Sbjct: 18 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYREL-V 75
Query: 99 FHHCQGHPNIIQLL---------EYYED--------DEN----------HERHKR----- 126
C H NII LL E ++D D N HER
Sbjct: 76 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 135
Query: 127 -----------IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
I HRDLKP NI+ V D +K+ DF L T+ S + TP ++
Sbjct: 136 LCGIKHLHSAGIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVV 187
Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
T + APE++ GY + D+WS+G ++ ++ G F G
Sbjct: 188 TRY----YRAPEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGT 228
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 83/194 (42%), Gaps = 33/194 (17%)
Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
Q C + L + QG+ HRD+K ++IL + +KL DF G S
Sbjct: 142 QIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGR---IKLSDF----GFCAQVSKE 194
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
P L VG+ +MAPE+++ Y D+WSLG++V ++ G PP++
Sbjct: 195 VPKRKXL----VGTPYWMAPEVISRL------PYGTEVDIWSLGIMVIEMIDGEPPYFNE 244
Query: 354 CGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS 413
+ ++ L ++ H +S + + +LV++ +R +
Sbjct: 245 PPL-------QAMRRIRDSLPPRVKDLH---------KVSSVLRGFLDLMLVREPSQRAT 288
Query: 414 AASVLKHPWISTAG 427
A +L HP++ AG
Sbjct: 289 AQELLGHPFLKLAG 302
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 17/100 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRD+K ++IL + +KL DF G S P L VG+ +MAP
Sbjct: 162 VIHRDIKSDSILLTSDGR---IKLSDF----GFCAQVSKEVPKRKXL----VGTPYWMAP 210
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
E+++ Y D+WSLG++V ++ G PP++
Sbjct: 211 EVISRL------PYGTEVDIWSLGIMVIEMIDGEPPYFNE 244
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 35/170 (20%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRDLKP N+ D VKL DF L + + VG+ +M+P
Sbjct: 137 VLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDEDFAKEF--------VGTPYYMSP 185
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E +N Y+++ D+WSLG ++Y L PPF + + E +E
Sbjct: 186 EQMNRM------SYNEKSDIWSLGCLLYELCALMPPF-------TAFSQKELAGKIREGK 232
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
F I + SDE ++I R+L R S +L++P I
Sbjct: 233 FRRIPYRY-----------SDELNEIITRMLNLKDYHRPSVEEILENPLI 271
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 17/97 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+ D VKL DF L + + VG+ +M+P
Sbjct: 137 VLHRDLKPANVFL---DGKQNVKLGDFGLARILNHDEDFAKEF--------VGTPYYMSP 185
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E +N Y+++ D+WSLG ++Y L PPF
Sbjct: 186 EQMNRM------SYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 89/197 (45%), Gaps = 43/197 (21%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L T+ S + P ++T + A
Sbjct: 148 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMVPFVVTRY----YRA 195
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGW-----QRGETCH 367
PE++ GY + D+WS+G ++ ++ G F G D W Q G C
Sbjct: 196 PEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGTDHID-QWNKVIEQLGTPCP 248
Query: 368 ACQEILFHSIQQ--------GHYDF----------PEGEWSTI-SDEAKDLIRRLLVKDA 408
+ L +++ Y F + E + + + +A+DL+ ++LV DA
Sbjct: 249 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDA 308
Query: 409 RKRLSAASVLKHPWIST 425
KR+S L+HP+I+
Sbjct: 309 SKRISVDEALQHPYINV 325
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 92/231 (39%), Gaps = 67/231 (29%)
Query: 43 SCFQDLYRLKG-EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRS---RVFKEVET 98
S F L R + + +G GA V + + E A+K + + P +++ R ++E+
Sbjct: 20 STFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSR-PFQNQTHAKRAYREL-V 77
Query: 99 FHHCQGHPNIIQLL---------EYYED--------DEN----------HERHKR----- 126
C H NII LL E ++D D N HER
Sbjct: 78 LMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQMELDHERMSYLLYQM 137
Query: 127 -----------IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLL 175
I HRDLKP NI+ V D +K+ DF L T+ S + P ++
Sbjct: 138 LCGIKHLHSAGIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMVPFVV 189
Query: 176 TPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
T + APE++ GY + D+WS+G ++ ++ G F G
Sbjct: 190 TRY----YRAPEVILGM------GYKENVDIWSVGCIMGEMIKGGVLFPGT 230
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 81/218 (37%), Gaps = 55/218 (25%)
Query: 46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
+D + + GE LG GA+ V N T + A K+ID E++ C H
Sbjct: 36 EDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD-H 93
Query: 106 PNIIQLLE--YYE---------------------------------------DDENHERH 124
PNI++LL+ YYE D N+
Sbjct: 94 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
+I HRDLK NIL +KL DF + + +G+ +M
Sbjct: 154 NKIIHRDLKAGNILFTLD---GDIKLADFGVSAKNTRXIQRRDXF--------IGTPYWM 202
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
APE+V + YD + D+WSLG+ + + PP
Sbjct: 203 APEVVMCETSKDRP-YDYKADVWSLGITLIEMAEIEPP 239
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 74/188 (39%), Gaps = 28/188 (14%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLA 297
C + L + I HRDLK NIL +KL DF + +
Sbjct: 140 VCKQTLDALNYLHDNKIIHRDLKAGNILFTLD---GDIKLADFGVSAKNTRXIQRRDXF- 195
Query: 298 TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
+G+ +MAPE+V + YD + D+WSLG+ + + PP +
Sbjct: 196 -------IGTPYWMAPEVVMCETSKDRP-YDYKADVWSLGITLIEMAEIEPPHH------ 241
Query: 358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASV 417
+ + +L + + WS+ KD +++ L K+ R + + +
Sbjct: 242 -------ELNPMRVLLKIAKSEPPTLAQPSRWSS---NFKDFLKKCLEKNVDARWTTSQL 291
Query: 418 LKHPWIST 425
L+HP+++
Sbjct: 292 LQHPFVTV 299
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 78/195 (40%), Gaps = 37/195 (18%)
Query: 234 QRGETCHACQEIL--FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
Q C C + L HS Q + HRD+K +NIL VKL DF + I S
Sbjct: 117 QIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQS 171
Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
S T VG+ +MAPE+V Y + D+WSLG++ ++ G PP+
Sbjct: 172 KRS--------TMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYL 217
Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
L+ G + E +S +D + R L D KR
Sbjct: 218 N--------------ENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLDMDVEKR 261
Query: 412 LSAASVLKHPWISTA 426
SA +L+H ++ A
Sbjct: 262 GSAKELLQHQFLKIA 276
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 81/209 (38%), Gaps = 57/209 (27%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLE 113
E +G+GA +V T +++ T E A++ ++ + + E+ + +PNI+ L+
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-NPNIVNYLD 84
Query: 114 -YYEDDE--------------------------------------NHERHKRIAHRDLKP 134
Y DE ++ HRD+K
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 144
Query: 135 ENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMG 194
+NIL VKL DF + I S S T VG+ +MAPE+V
Sbjct: 145 DNILLGMD---GSVKLTDFGFCAQITPEQSKRS--------TMVGTPYWMAPEVVTR--- 190
Query: 195 PEASGYDKRCDLWSLGVVVYILLCGYPPF 223
Y + D+WSLG++ ++ G PP+
Sbjct: 191 ---KAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 78/195 (40%), Gaps = 37/195 (18%)
Query: 234 QRGETCHACQEIL--FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
Q C C + L HS Q + HRD+K +NIL VKL DF + I S
Sbjct: 117 QIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQS 171
Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
S + VG+ +MAPE+V Y + D+WSLG++ ++ G PP+
Sbjct: 172 KRSXM--------VGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYL 217
Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
L+ G + E +S +D + R L D KR
Sbjct: 218 N--------------ENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKR 261
Query: 412 LSAASVLKHPWISTA 426
SA +L+H ++ A
Sbjct: 262 GSAKELLQHQFLKIA 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 81/209 (38%), Gaps = 57/209 (27%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLE 113
E +G+GA +V T +++ T E A++ ++ + + E+ + +PNI+ L+
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-NPNIVNYLD 84
Query: 114 -YYEDDE--------------------------------------NHERHKRIAHRDLKP 134
Y DE ++ HRD+K
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 144
Query: 135 ENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMG 194
+NIL VKL DF + I S S + VG+ +MAPE+V
Sbjct: 145 DNILLGMD---GSVKLTDFGFCAQITPEQSKRSXM--------VGTPYWMAPEVVTR--- 190
Query: 195 PEASGYDKRCDLWSLGVVVYILLCGYPPF 223
Y + D+WSLG++ ++ G PP+
Sbjct: 191 ---KAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 78/195 (40%), Gaps = 37/195 (18%)
Query: 234 QRGETCHACQEIL--FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
Q C C + L HS Q + HRD+K +NIL VKL DF + I S
Sbjct: 117 QIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQS 171
Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
S + VG+ +MAPE+V Y + D+WSLG++ ++ G PP+
Sbjct: 172 KRSEM--------VGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYL 217
Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
L+ G + E +S +D + R L D KR
Sbjct: 218 N--------------ENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLDMDVEKR 261
Query: 412 LSAASVLKHPWISTA 426
SA +L+H ++ A
Sbjct: 262 GSAKELLQHQFLKIA 276
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 81/209 (38%), Gaps = 57/209 (27%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLE 113
E +G+GA +V T +++ T E A++ ++ + + E+ + +PNI+ L+
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-NPNIVNYLD 84
Query: 114 -YYEDDE--------------------------------------NHERHKRIAHRDLKP 134
Y DE ++ HRD+K
Sbjct: 85 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 144
Query: 135 ENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMG 194
+NIL VKL DF + I S S + VG+ +MAPE+V
Sbjct: 145 DNILLGMD---GSVKLTDFGFCAQITPEQSKRSEM--------VGTPYWMAPEVVTR--- 190
Query: 195 PEASGYDKRCDLWSLGVVVYILLCGYPPF 223
Y + D+WSLG++ ++ G PP+
Sbjct: 191 ---KAYGPKVDIWSLGIMAIEMIEGEPPY 216
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 31/184 (16%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP N+ V+ D S +++ DF L A + V + + A
Sbjct: 151 GIIHRDLKPSNV-AVNED--SELRILDFGLARQ-----------ADEEMTGYVATRWYRA 196
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
PEI+ +M Y++ D+WS+G ++ LL G F G+ D + E
Sbjct: 197 PEIMLNWMH-----YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPE 251
Query: 373 LFHSIQQGHYD--------FPEGEWSTISDEAK----DLIRRLLVKDARKRLSAASVLKH 420
+ I H P+ + S+I A DL+ R+LV D+ +R+SAA L H
Sbjct: 252 VLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAH 311
Query: 421 PWIS 424
+ S
Sbjct: 312 AYFS 315
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 92/225 (40%), Gaps = 69/225 (30%)
Query: 50 RLKG-EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGH 105
RL+G +G GAY SV + + + AVK + + P S R ++E+ H + H
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHLK-H 86
Query: 106 PNIIQLLEYY------ED-------------DENH--------ERHKR------------ 126
N+I LL+ + ED D N+ + H +
Sbjct: 87 ENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKY 146
Query: 127 -----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
I HRDLKP N+ V+ D S +++ DF L A + V +
Sbjct: 147 IHSAGIIHRDLKPSNV-AVNED--SELRILDFGLARQ-----------ADEEMTGYVATR 192
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ APEI+ +M Y++ D+WS+G ++ LL G F G+
Sbjct: 193 WYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 81/184 (44%), Gaps = 31/184 (16%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP N+ V+ D S +++ DF L A + V + + A
Sbjct: 151 GIIHRDLKPSNV-AVNED--SELRILDFGLARQ-----------ADEEMTGYVATRWYRA 196
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
PEI+ +M Y++ D+WS+G ++ LL G F G+ D + E
Sbjct: 197 PEIMLNWMH-----YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPE 251
Query: 373 LFHSIQQGHYD--------FPEGEWSTISDEAK----DLIRRLLVKDARKRLSAASVLKH 420
+ I H P+ + S+I A DL+ R+LV D+ +R+SAA L H
Sbjct: 252 VLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAH 311
Query: 421 PWIS 424
+ S
Sbjct: 312 AYFS 315
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 92/225 (40%), Gaps = 69/225 (30%)
Query: 50 RLKG-EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGH 105
RL+G +G GAY SV + + + AVK + + P S R ++E+ H + H
Sbjct: 29 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHLK-H 86
Query: 106 PNIIQLLEYY------ED-------------DENH--------ERHKR------------ 126
N+I LL+ + ED D N+ + H +
Sbjct: 87 ENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKY 146
Query: 127 -----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
I HRDLKP N+ V+ D S +++ DF L A + V +
Sbjct: 147 IHSAGIIHRDLKPSNV-AVNED--SELRILDFGLARQ-----------ADEEMTGYVATR 192
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ APEI+ +M Y++ D+WS+G ++ LL G F G+
Sbjct: 193 WYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLQGKALFPGS 232
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 36/168 (21%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
LF ++GI +RDLK +N++ D +K+ DF + +
Sbjct: 133 LFFLHKRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMMDGVTTREFC-------- 181
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
G+ +++APEI+ Y K D W+ GV++Y +L G PPF GED
Sbjct: 182 GTPDYIAPEII------AYQPYGKSVDWWAYGVLLYEMLAGQPPF---DGED-------- 224
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS 413
++ LF SI + + +P+ ++S EA + + L+ K KRL
Sbjct: 225 ----EDELFQSIMEHNVSYPK----SLSKEAVSICKGLMTKHPAKRLG 264
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 48/104 (46%), Gaps = 18/104 (17%)
Query: 124 HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
HKR I +RDLK +N++ D +K+ DF + + G+ +
Sbjct: 137 HKRGIIYRDLKLDNVML---DSEGHIKIADFGMCKEHMMDGVTTREFC--------GTPD 185
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
++APEI+ Y K D W+ GV++Y +L G PPF G
Sbjct: 186 YIAPEII------AYQPYGKSVDWWAYGVLLYEMLAGQPPFDGE 223
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 31/183 (16%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
G+ HRDLKP N L V+ D +K+ DF L A + V + + A
Sbjct: 146 GVVHRDLKPGN-LAVNED--CELKILDFGLARH-----------ADAEMTGYVVTRWYRA 191
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGE 364
PE++ ++M Y++ D+WS+G ++ +L G F G D G E
Sbjct: 192 PEVILSWMH-----YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE 246
Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
+ S Q P +++ + S +A DL+ ++L D KRL+AA L H
Sbjct: 247 FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 306
Query: 421 PWI 423
P+
Sbjct: 307 PFF 309
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 19/100 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N L V+ D +K+ DF L A + V + + AP
Sbjct: 147 VVHRDLKPGN-LAVNED--CELKILDFGLARH-----------ADAEMTGYVVTRWYRAP 192
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
E++ ++M Y++ D+WS+G ++ +L G F G
Sbjct: 193 EVILSWMH-----YNQTVDIWSVGCIMAEMLTGKTLFKGK 227
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 81/197 (41%), Gaps = 34/197 (17%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
HSI GI HRD+KP+N+L P + +KL DF S +A ++ +
Sbjct: 157 IHSI--GICHRDIKPQNLLLDPPSGV--LKLIDFG---------SAKILIAGEPNVSXIC 203
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
S + APE++ A+ Y D+WS G V+ L+ G P F G G D Q E
Sbjct: 204 SRYYRAPELIFG-----ATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID---QLVEII 255
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTIS-------------DEAKDLIRRLLVKDARKRLS 413
I+ + ++ E ++ I +A DLI RLL RL+
Sbjct: 256 KVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLT 315
Query: 414 AASVLKHPWISTAGTAH 430
A L HP+ T
Sbjct: 316 AIEALCHPFFDELRTGE 332
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L P + +KL DF S +A ++ + S + AP
Sbjct: 162 ICHRDIKPQNLLLDPPSGV--LKLIDFG---------SAKILIAGEPNVSXICSRYYRAP 210
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ L+ G P F G G D
Sbjct: 211 ELIFG-----ATNYTTNIDIWSTGCVMAELMQGQPLFPGESGID 249
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 78/195 (40%), Gaps = 37/195 (18%)
Query: 234 QRGETCHACQEIL--FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
Q C C + L HS Q + HRD+K +NIL VKL DF + I S
Sbjct: 118 QIAAVCRECLQALEFLHSNQ--VIHRDIKSDNILLGMD---GSVKLTDFGFCAQITPEQS 172
Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
S + VG+ +MAPE+V Y + D+WSLG++ ++ G PP+
Sbjct: 173 KRSXM--------VGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYL 218
Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
L+ G + E +S +D + R L D KR
Sbjct: 219 N--------------ENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKR 262
Query: 412 LSAASVLKHPWISTA 426
SA +++H ++ A
Sbjct: 263 GSAKELIQHQFLKIA 277
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 81/209 (38%), Gaps = 57/209 (27%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLE 113
E +G+GA +V T +++ T E A++ ++ + + E+ + +PNI+ L+
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-NPNIVNYLD 85
Query: 114 -YYEDDE--------------------------------------NHERHKRIAHRDLKP 134
Y DE ++ HRD+K
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKS 145
Query: 135 ENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMG 194
+NIL VKL DF + I S S + VG+ +MAPE+V
Sbjct: 146 DNILLGMD---GSVKLTDFGFCAQITPEQSKRSXM--------VGTPYWMAPEVVTR--- 191
Query: 195 PEASGYDKRCDLWSLGVVVYILLCGYPPF 223
Y + D+WSLG++ ++ G PP+
Sbjct: 192 ---KAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 38/176 (21%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
++ I +RDLKPENIL D +++ D L +VH P + VG+ +
Sbjct: 304 RERIVYRDLKPENILL---DDHGHIRISDLGL--------AVHVPEGQ-TIKGRVGTVGY 351
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
MAPE+V + Y D W+LG ++Y ++ G PF QR +
Sbjct: 352 MAPEVV------KNERYTFSPDWWALGCLLYEMIAGQSPFQ---------QRK------K 390
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP 421
+I +++ + PE S +A+ L +LL KD +RL SA V +HP
Sbjct: 391 KIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHP 446
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 18/100 (18%)
Query: 124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
+RI +RDLKPENIL D +++ D L +VH P + VG+ +
Sbjct: 304 RERIVYRDLKPENILL---DDHGHIRISDLGL--------AVHVPEGQ-TIKGRVGTVGY 351
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
MAPE+V + Y D W+LG ++Y ++ G PF
Sbjct: 352 MAPEVV------KNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/183 (27%), Positives = 79/183 (43%), Gaps = 31/183 (16%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
G+ HRDLKP N L V+ D +K+ DF L A + V + + A
Sbjct: 164 GVVHRDLKPGN-LAVNED--CELKILDFGLARH-----------ADAEMTGYVVTRWYRA 209
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGE 364
PE++ ++M Y++ D+WS+G ++ +L G F G D G E
Sbjct: 210 PEVILSWMH-----YNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTE 264
Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
+ S Q P +++ + S +A DL+ ++L D KRL+AA L H
Sbjct: 265 FVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTH 324
Query: 421 PWI 423
P+
Sbjct: 325 PFF 327
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 86/217 (39%), Gaps = 67/217 (30%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHSR---SRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + ++ + + A+K + + P S R ++E+ H Q H N+I LL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSR-PFQSEIFAKRAYRELLLLKHMQ-HENVIGLL 107
Query: 113 --------------------------------EYYEDDENHERHKR-----------IAH 129
E+ E+ + ++ + H
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSAGVVH 167
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIV 189
RDLKP N L V+ D +K+ DF L A + V + + APE++
Sbjct: 168 RDLKPGN-LAVNED--CELKILDFGLARH-----------ADAEMTGYVVTRWYRAPEVI 213
Query: 190 NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
++M Y++ D+WS+G ++ +L G F G
Sbjct: 214 LSWMH-----YNQTVDIWSVGCIMAEMLTGKTLFKGK 245
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ L K+ DF L T+ S + TP ++T + A
Sbjct: 146 GIIHRDLKPSNIVVKSDXTL---KILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ IL G Y + E G E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
Q + + ++ + Y FP+ + S+ +A+DL+ ++LV D
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 410 KRLSAASVLKHPWIST 425
KR+S L+HP+I+
Sbjct: 308 KRISVDDALQHPYINV 323
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 18/87 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI+ L K+ DF L T+ S + TP ++T + AP
Sbjct: 147 IIHRDLKPSNIVVKSDXTL---KILDFGLA-----RTAGTSFMMTPYVVT----RYYRAP 194
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVV 213
E++ GY + D+WS+G ++
Sbjct: 195 EVILGM------GYKENVDIWSVGCIM 215
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 79/176 (44%), Gaps = 38/176 (21%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
++ I +RDLKPENIL D +++ D L +VH P + VG+ +
Sbjct: 304 RERIVYRDLKPENILL---DDHGHIRISDLGL--------AVHVPEGQ-TIKGRVGTVGY 351
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
MAPE+V + Y D W+LG ++Y ++ G PF QR +
Sbjct: 352 MAPEVV------KNERYTFSPDWWALGCLLYEMIAGQSPFQ---------QRK------K 390
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL-----SAASVLKHP 421
+I +++ + PE S +A+ L +LL KD +RL SA V +HP
Sbjct: 391 KIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHP 446
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 18/100 (18%)
Query: 124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
+RI +RDLKPENIL D +++ D L +VH P + VG+ +
Sbjct: 304 RERIVYRDLKPENILL---DDHGHIRISDLGL--------AVHVPEGQ-TIKGRVGTVGY 351
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
MAPE+V + Y D W+LG ++Y ++ G PF
Sbjct: 352 MAPEVV------KNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 47/197 (23%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
+GI HRD+KP N++ H Q ++L D+ L ++N V S
Sbjct: 151 KGIMHRDVKPHNVMIDH--QQKKLRLIDWGLAEFYHPAQEYNVR-------------VAS 195
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
F PE++ + YD D+WSLG ++ ++ PF+ G+D Q
Sbjct: 196 RYFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRREPFF--HGQDNYDQLVRIAK 248
Query: 368 AC-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVK 406
E L+ +++ H D W +S EA DL+ +LL
Sbjct: 249 VLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRY 308
Query: 407 DARKRLSAASVLKHPWI 423
D ++RL+A ++HP+
Sbjct: 309 DHQQRLTAKEAMEHPYF 325
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 24/104 (23%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 180
K I HRD+KP N++ H Q ++L D+ L ++N V S
Sbjct: 151 KGIMHRDVKPHNVMIDH--QQKKLRLIDWGLAEFYHPAQEYNVR-------------VAS 195
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
F PE++ + YD D+WSLG ++ ++ PF+
Sbjct: 196 RYFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRREPFF 234
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ L K+ DF L T+ S + TP ++T + A
Sbjct: 139 GIIHRDLKPSNIVVKSDXTL---KILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 186
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ IL G Y + E G E
Sbjct: 187 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
Q + + ++ + Y FP+ + S+ +A+DL+ ++LV D
Sbjct: 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 300
Query: 410 KRLSAASVLKHPWIST 425
KR+S L+HP+I+
Sbjct: 301 KRISVDDALQHPYINV 316
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 18/87 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI+ L K+ DF L T+ S + TP ++T + AP
Sbjct: 140 IIHRDLKPSNIVVKSDXTL---KILDFGLA-----RTAGTSFMMTPYVVT----RYYRAP 187
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVV 213
E++ GY + D+WS+G ++
Sbjct: 188 EVILGM------GYKENVDIWSVGCIM 208
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 93/219 (42%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ L K+ DF L T+ S + TP ++T + A
Sbjct: 146 GIIHRDLKPSNIVVKSDXTL---KILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ IL G Y + E G E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
Q + + ++ + Y FP+ + S+ +A+DL+ ++LV D
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
KR+S L+HP+I+ A PQ+ + RE
Sbjct: 308 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 346
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 18/87 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI+ L K+ DF L T+ S + TP ++T + AP
Sbjct: 147 IIHRDLKPSNIVVKSDXTL---KILDFGLA-----RTAGTSFMMTPYVVT----RYYRAP 194
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVV 213
E++ GY + D+WS+G ++
Sbjct: 195 EVILGM------GYKENVDIWSVGCIM 215
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 105/247 (42%), Gaps = 49/247 (19%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
HS+ GI HRD+KP+N+L D +KLCDF GS K S S + +
Sbjct: 156 FIHSL--GICHRDIKPQNLLVNSKDNT--LKLCDF--GSAKKLIPSEPS-------VAXI 202
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC----------- 354
S + APE++ +G A+ Y DLWS+G V L+ G P F G
Sbjct: 203 CSRFYRAPELM---LG--ATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQI 257
Query: 355 -GEDCGWQRGETCHACQEILFHSIQQGHYD--FPEGEWSTISDEAKDLIRRLLVKDARKR 411
G Q E+ F +++ + PEG S A DL+ ++L + R
Sbjct: 258 MGTPTKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSL----AIDLLEQILRYEPDLR 313
Query: 412 LSAASVLKHPWISTAGTAHRPLVT-----PQVIRRNQSARELSSFAESAMSA------NR 460
++ + HP+ ++ V P + NQ+ +L +F+ +S NR
Sbjct: 314 INPYEAMAHPFFDHLRNSYESEVKNNSNFPHGV--NQNIPQLFNFSPYELSIIPGNVLNR 371
Query: 461 VILQHFS 467
++ ++FS
Sbjct: 372 ILPKNFS 378
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 51/104 (49%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L D +KLCDF GS K S S + + S + AP
Sbjct: 162 ICHRDIKPQNLLVNSKDNT--LKLCDF--GSAKKLIPSEPS-------VAXICSRFYRAP 210
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ +G A+ Y DLWS+G V L+ G P F G D
Sbjct: 211 ELM---LG--ATEYTPSIDLWSIGCVFGELILGKPLFSGETSID 249
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 81/197 (41%), Gaps = 47/197 (23%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
+GI HRD+KP N++ H Q ++L D+ L ++N V S
Sbjct: 156 KGIMHRDVKPHNVMIDH--QQKKLRLIDWGLAEFYHPAQEYNVR-------------VAS 200
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCH 367
F PE++ + YD D+WSLG ++ ++ PF+ G+D Q
Sbjct: 201 RYFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRREPFF--HGQDNYDQLVRIAK 253
Query: 368 AC-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVK 406
E L+ +++ H D W +S EA DL+ +LL
Sbjct: 254 VLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLRY 313
Query: 407 DARKRLSAASVLKHPWI 423
D ++RL+A ++HP+
Sbjct: 314 DHQQRLTAKEAMEHPYF 330
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 45/104 (43%), Gaps = 24/104 (23%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 180
K I HRD+KP N++ H Q ++L D+ L ++N V S
Sbjct: 156 KGIMHRDVKPHNVMIDH--QQKKLRLIDWGLAEFYHPAQEYNVR-------------VAS 200
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
F PE++ + YD D+WSLG ++ ++ PF+
Sbjct: 201 RYFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRREPFF 239
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 28/145 (19%)
Query: 210 GVVVYILLCGYPPF-YGNCGEDCGWQRGETCHACQE--ILFHSIQ-QGIAHRDLKPENIL 265
G +Y +L G P Y W C C + HS+Q + + HRDLKP N+L
Sbjct: 84 GGSLYNVLHGAEPLPYYTAAHAMSW-----CLQCSQGVAYLHSMQPKALIHRDLKPPNLL 138
Query: 266 CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEAS 325
V + +K+CDF I+ + + + GSA +MAPE+ E S
Sbjct: 139 LVAGGTV--LKICDFGTACDIQTHMTNNK-----------GSAAWMAPEVF------EGS 179
Query: 326 GYDKRCDLWSLGVVVYILLCGYPPF 350
Y ++CD++S G++++ ++ PF
Sbjct: 180 NYSEKCDVFSWGIILWEVITRRKPF 204
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 19/99 (19%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K + HRDLKP N+L V + +K+CDF I+ + + + GSA +M
Sbjct: 125 KALIHRDLKPPNLLLVAGGTV--LKICDFGTACDIQTHMTNNK-----------GSAAWM 171
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE+ E S Y ++CD++S G++++ ++ PF
Sbjct: 172 APEVF------EGSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ L K+ DF L T+ S + TP ++T + A
Sbjct: 146 GIIHRDLKPSNIVVKSDXTL---KILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ IL G Y + E G E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
Q + + ++ + Y FP+ + S+ +A+DL+ ++LV D
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 410 KRLSAASVLKHPWIST 425
KR+S L+HP+I+
Sbjct: 308 KRISVDDALQHPYINV 323
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 18/87 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI+ L K+ DF L T+ S + TP ++T + AP
Sbjct: 147 IIHRDLKPSNIVVKSDXTL---KILDFGLA-----RTAGTSFMMTPYVVTRY----YRAP 194
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVV 213
E++ GY + D+WS+G ++
Sbjct: 195 EVILGM------GYKENVDIWSVGCIM 215
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 20/105 (19%)
Query: 247 FHSIQ-QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
HS+Q + + HRDLKP N+L V + +K+CDF I+ + + +
Sbjct: 118 LHSMQPKALIHRDLKPPNLLLVAGGTV--LKICDFGTACDIQTHMTNNK----------- 164
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
GSA +MAPE+ E S Y ++CD++S G++++ ++ PF
Sbjct: 165 GSAAWMAPEVF------EGSNYSEKCDVFSWGIILWEVITRRKPF 203
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 52/99 (52%), Gaps = 19/99 (19%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K + HRDLKP N+L V + +K+CDF I+ + + + GSA +M
Sbjct: 124 KALIHRDLKPPNLLLVAGGTV--LKICDFGTACDIQTHMTNNK-----------GSAAWM 170
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE+ E S Y ++CD++S G++++ ++ PF
Sbjct: 171 APEVF------EGSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 41/196 (20%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ L K+ DF L T+ S + TP ++T + A
Sbjct: 146 GIIHRDLKPSNIVVKSDXTL---KILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ IL G Y + E G E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
Q + + ++ + Y FP+ + S+ +A+DL+ ++LV D
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 410 KRLSAASVLKHPWIST 425
KR+S L+HP+I+
Sbjct: 308 KRISVDDALQHPYINV 323
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 18/87 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI+ L K+ DF L T+ S + TP ++T + AP
Sbjct: 147 IIHRDLKPSNIVVKSDXTL---KILDFGLA-----RTAGTSFMMTPYVVTRY----YRAP 194
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVV 213
E++ GY + D+WS+G ++
Sbjct: 195 EVILGM------GYKENVDIWSVGCIM 215
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 74/185 (40%), Gaps = 40/185 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRDLKP+NIL Q +KL DF L F ++ S + T + AP
Sbjct: 141 VVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVT---------LWYRAP 188
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC--------------G 359
E++ S Y DLWS+G + + P F G+ D
Sbjct: 189 EVLLQ------SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242
Query: 360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDE-AKDLIRRLLVKDARKRLSAASVL 418
W R A FHS P ++ T DE KDL+ + L + KR+SA S L
Sbjct: 243 WPRDV---ALPRQAFHSKSAQ----PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 419 KHPWI 423
HP+
Sbjct: 296 SHPYF 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 18/105 (17%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
R+ HRDLKP+NIL Q +KL DF L F ++ S + T + A
Sbjct: 140 RVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVT---------LWYRA 187
Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
PE++ S Y DLWS+G + + P F G+ D
Sbjct: 188 PEVLL------QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD 226
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 74/185 (40%), Gaps = 40/185 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRDLKP+NIL Q +KL DF L F ++ S + T + AP
Sbjct: 141 VVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVT---------LWYRAP 188
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC--------------G 359
E++ S Y DLWS+G + + P F G+ D
Sbjct: 189 EVLLQ------SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242
Query: 360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDE-AKDLIRRLLVKDARKRLSAASVL 418
W R A FHS P ++ T DE KDL+ + L + KR+SA S L
Sbjct: 243 WPRDV---ALPRQAFHSKSAQ----PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 419 KHPWI 423
HP+
Sbjct: 296 SHPYF 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 18/105 (17%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
R+ HRDLKP+NIL Q +KL DF L F ++ S + T + A
Sbjct: 140 RVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVT---------LWYRA 187
Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
PE++ S Y DLWS+G + + P F G+ D
Sbjct: 188 PEVLL------QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD 226
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + A
Sbjct: 184 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 231
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ IL G Y + E G E
Sbjct: 232 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 285
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
Q + + ++ + Y FP+ + S+ +A+DL+ ++LV D
Sbjct: 286 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 345
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
KR+S L+HP+I+ A PQ+ + RE
Sbjct: 346 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 384
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 18/87 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + AP
Sbjct: 185 IIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRAP 232
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVV 213
E++ GY + D+WS+G ++
Sbjct: 233 EVILGM------GYKENVDIWSVGCIM 253
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 81/200 (40%), Gaps = 39/200 (19%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
W+R E + Q GI H DLKP N L V +KL DF + + ++ +
Sbjct: 127 WERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDX-- 180
Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGY 347
+ + VG+ +M PE + +G K D+WSLG ++Y + G
Sbjct: 181 ----XXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGK 236
Query: 348 PPFYGNCGEDCGWQRGETCHAC----QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL 403
PF + HA EI F D PE + +D+++
Sbjct: 237 TPFQQIINQIS------KLHAIIDPNHEIEFP-------DIPEK-------DLQDVLKCC 276
Query: 404 LVKDARKRLSAASVLKHPWI 423
L +D ++R+S +L HP++
Sbjct: 277 LKRDPKQRISIPELLAHPYV 296
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 15/102 (14%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I H DLKP N L V +KL DF + + ++ + + + VG+ +M P
Sbjct: 148 IVHSDLKPANFLIVD----GMLKLIDFGIANQMQPDX------XXVVKDSQVGTVNYMPP 197
Query: 187 EIVNAFMGPEASGYDKRC-----DLWSLGVVVYILLCGYPPF 223
E + +G K D+WSLG ++Y + G PF
Sbjct: 198 EAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF 239
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 74/185 (40%), Gaps = 40/185 (21%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRDLKP+NIL Q +KL DF L F ++ S + T + AP
Sbjct: 141 VVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVT---------LWYRAP 188
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC--------------G 359
E++ S Y DLWS+G + + P F G+ D
Sbjct: 189 EVLLQ------SSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEED 242
Query: 360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDE-AKDLIRRLLVKDARKRLSAASVL 418
W R A FHS P ++ T DE KDL+ + L + KR+SA S L
Sbjct: 243 WPRDV---ALPRQAFHSKSAQ----PIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSAL 295
Query: 419 KHPWI 423
HP+
Sbjct: 296 SHPYF 300
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 46/105 (43%), Gaps = 18/105 (17%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
R+ HRDLKP+NIL Q +KL DF L F ++ S + T + A
Sbjct: 140 RVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVT---------LWYRA 187
Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
PE++ S Y DLWS+G + + P F G+ D
Sbjct: 188 PEVLL------QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVD 226
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 32/173 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRD+KP NIL + +KLCDF V L + + VG+ +M+P
Sbjct: 145 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMSP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E + + + Y + D+WS+G+ + + G P G A E+L
Sbjct: 192 ERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSG----------SMAIFELL 235
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA 426
+ + + P G +S E +D + + L+K+ +R ++ H +I +
Sbjct: 236 DYIVNEPPPKLPSGVFSL---EFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 285
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 20/108 (18%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
E+HK I HRD+KP NIL + +KLCDF V L + + VG+
Sbjct: 140 REKHK-IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGT 185
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
+M+PE + + + Y + D+WS+G+ + + G P G
Sbjct: 186 RSYMSPERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSG 227
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 80/192 (41%), Gaps = 36/192 (18%)
Query: 226 NCGEDC-GWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD 281
N ED G+Q +I L H Q+ I +RDLKPEN+L D V++ D
Sbjct: 278 NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLG 334
Query: 282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
L +K + A G+ FMAPE++ +G E YD D ++LGV +Y
Sbjct: 335 LAVELKAGQTKTKGYA--------GTPGFMAPELL---LGEE---YDFSVDYFALGVTLY 380
Query: 342 ILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
++ PF RGE + L + + +P+ S +KD
Sbjct: 381 EMIAARGPFRA---------RGEKVENKE--LKQRVLEQAVTYPD----KFSPASKDFCE 425
Query: 402 RLLVKDARKRLS 413
LL KD KRL
Sbjct: 426 ALLQKDPEKRLG 437
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 39/156 (25%)
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
H + I +RDLKPEN+L D V++ D L +K + A G
Sbjct: 303 EHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYA--------G 351
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 239
+ FMAPE++ +G E YD D ++LGV +Y ++ PF RGE
Sbjct: 352 TPGFMAPELL---LGEE---YDFSVDYFALGVTLYEMIAARGPFRA---------RGEKV 396
Query: 240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPV 275
+E+ ++Q + +PD+ SP
Sbjct: 397 EN-KELKQRVLEQAV------------TYPDKFSPA 419
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + A
Sbjct: 184 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRA 231
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ IL G Y + E G E
Sbjct: 232 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 285
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
Q + + ++ + Y FP+ + S+ +A+DL+ ++LV D
Sbjct: 286 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 345
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
KR+S L+HP+I+ A PQ+ + RE
Sbjct: 346 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 384
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 18/87 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + AP
Sbjct: 185 IIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVTRY----YRAP 232
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVV 213
E++ GY + D+WS+G ++
Sbjct: 233 EVILGM------GYKENVDIWSVGCIM 253
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 80/192 (41%), Gaps = 36/192 (18%)
Query: 226 NCGEDC-GWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD 281
N ED G+Q +I L H Q+ I +RDLKPEN+L D V++ D
Sbjct: 278 NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLG 334
Query: 282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
L +K + A G+ FMAPE++ +G E YD D ++LGV +Y
Sbjct: 335 LAVELKAGQTKTKGYA--------GTPGFMAPELL---LGEE---YDFSVDYFALGVTLY 380
Query: 342 ILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
++ PF RGE + L + + +P+ S +KD
Sbjct: 381 EMIAARGPFRA---------RGEKVENKE--LKQRVLEQAVTYPD----KFSPASKDFCE 425
Query: 402 RLLVKDARKRLS 413
LL KD KRL
Sbjct: 426 ALLQKDPEKRLG 437
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 39/156 (25%)
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
H + I +RDLKPEN+L D V++ D L +K + A G
Sbjct: 303 EHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYA--------G 351
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 239
+ FMAPE++ +G E YD D ++LGV +Y ++ PF RGE
Sbjct: 352 TPGFMAPELL---LGEE---YDFSVDYFALGVTLYEMIAARGPFRA---------RGEKV 396
Query: 240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPV 275
+E+ ++Q + +PD+ SP
Sbjct: 397 EN-KELKQRVLEQAV------------TYPDKFSPA 419
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + A
Sbjct: 146 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ IL G Y + E G E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
Q + + ++ + Y FP+ + S+ +A+DL+ ++LV D
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
KR+S L+HP+I+ A PQ+ + RE
Sbjct: 308 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 346
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 18/87 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + AP
Sbjct: 147 IIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRAP 194
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVV 213
E++ GY + D+WS+G ++
Sbjct: 195 EVILGM------GYKENVDIWSVGCIM 215
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + A
Sbjct: 147 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 194
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ IL G Y + E G E
Sbjct: 195 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 248
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
Q + + ++ + Y FP+ + S+ +A+DL+ ++LV D
Sbjct: 249 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 308
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
KR+S L+HP+I+ A PQ+ + RE
Sbjct: 309 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 347
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 18/87 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + AP
Sbjct: 148 IIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRAP 195
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVV 213
E++ GY + D+WS+G ++
Sbjct: 196 EVILGM------GYKENVDIWSVGCIM 216
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 80/192 (41%), Gaps = 36/192 (18%)
Query: 226 NCGEDC-GWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFD 281
N ED G+Q +I L H Q+ I +RDLKPEN+L D V++ D
Sbjct: 278 NVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLG 334
Query: 282 LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
L +K + A G+ FMAPE++ +G E YD D ++LGV +Y
Sbjct: 335 LAVELKAGQTKTKGYA--------GTPGFMAPELL---LGEE---YDFSVDYFALGVTLY 380
Query: 342 ILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIR 401
++ PF RGE + L + + +P+ S +KD
Sbjct: 381 EMIAARGPFRA---------RGEKVENKE--LKQRVLEQAVTYPD----KFSPASKDFCE 425
Query: 402 RLLVKDARKRLS 413
LL KD KRL
Sbjct: 426 ALLQKDPEKRLG 437
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 39/156 (25%)
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
H + I +RDLKPEN+L D V++ D L +K + A G
Sbjct: 303 EHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYA--------G 351
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 239
+ FMAPE++ +G E YD D ++LGV +Y ++ PF RGE
Sbjct: 352 TPGFMAPELL---LGEE---YDFSVDYFALGVTLYEMIAARGPFRA---------RGEKV 396
Query: 240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPV 275
+E+ ++Q + +PD+ SP
Sbjct: 397 EN-KELKQRVLEQAV------------TYPDKFSPA 419
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + A
Sbjct: 147 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 194
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ IL G Y + E G E
Sbjct: 195 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 248
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
Q + + ++ + Y FP+ + S+ +A+DL+ ++LV D
Sbjct: 249 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 308
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
KR+S L+HP+I+ A PQ+ + RE
Sbjct: 309 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 347
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 18/87 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + AP
Sbjct: 148 IIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRAP 195
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVV 213
E++ GY + D+WS+G ++
Sbjct: 196 EVILGM------GYKENVDIWSVGCIM 216
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + A
Sbjct: 145 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 192
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ IL G Y + E G E
Sbjct: 193 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 246
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
Q + + ++ + Y FP+ + S+ +A+DL+ ++LV D
Sbjct: 247 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 306
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
KR+S L+HP+I+ A PQ+ + RE
Sbjct: 307 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 345
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 18/87 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + AP
Sbjct: 146 IIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRAP 193
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVV 213
E++ GY + D+WS+G ++
Sbjct: 194 EVILGM------GYKENVDIWSVGCIM 214
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 77/167 (46%), Gaps = 36/167 (21%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
LF +GI +RDLK +N++ D +K+ DF + ++ + T
Sbjct: 455 LFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCK-----ENIWDGVTTKXF---C 503
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
G+ +++APEI+ Y K D W+ GV++Y +L G PF GED
Sbjct: 504 GTPDYIAPEII------AYQPYGKSVDWWAFGVLLYEMLAGQAPFE---GED-------- 546
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
++ LF SI + + +P+ ++S EA + + L+ K KRL
Sbjct: 547 ----EDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRL 585
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 17/101 (16%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K I +RDLK +N++ D +K+ DF + ++ + T G+ +++
Sbjct: 461 KGIIYRDLKLDNVML---DSEGHIKIADFGMCK-----ENIWDGVTTKXF---CGTPDYI 509
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
APEI+ Y K D W+ GV++Y +L G PF G
Sbjct: 510 APEII------AYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 544
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 78/195 (40%), Gaps = 37/195 (18%)
Query: 234 QRGETCHACQEIL--FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
Q C C + L HS Q + HR++K +NIL VKL DF + I S
Sbjct: 118 QIAAVCRECLQALEFLHSNQ--VIHRNIKSDNILLGMD---GSVKLTDFGFCAQITPEQS 172
Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
S T VG+ +MAPE+V Y + D+WSLG++ ++ G PP+
Sbjct: 173 KRS--------TMVGTPYWMAPEVVTR------KAYGPKVDIWSLGIMAIEMIEGEPPYL 218
Query: 352 GNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKR 411
L+ G + E +S +D + R L D KR
Sbjct: 219 N--------------ENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKR 262
Query: 412 LSAASVLKHPWISTA 426
SA +++H ++ A
Sbjct: 263 GSAKELIQHQFLKIA 277
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 81/209 (38%), Gaps = 57/209 (27%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLE 113
E +G+GA +V T +++ T E A++ ++ + + E+ + +PNI+ L+
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENK-NPNIVNYLD 85
Query: 114 -YYEDDE--------------------------------------NHERHKRIAHRDLKP 134
Y DE ++ HR++K
Sbjct: 86 SYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKS 145
Query: 135 ENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMG 194
+NIL VKL DF + I S S T VG+ +MAPE+V
Sbjct: 146 DNILLGMD---GSVKLTDFGFCAQITPEQSKRS--------TMVGTPYWMAPEVVTR--- 191
Query: 195 PEASGYDKRCDLWSLGVVVYILLCGYPPF 223
Y + D+WSLG++ ++ G PP+
Sbjct: 192 ---KAYGPKVDIWSLGIMAIEMIEGEPPY 217
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + A
Sbjct: 139 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 186
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ IL G Y + E G E
Sbjct: 187 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 240
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
Q + + ++ + Y FP+ + S+ +A+DL+ ++LV D
Sbjct: 241 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 300
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
KR+S L+HP+I+ A PQ+ + RE
Sbjct: 301 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 339
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 18/87 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + AP
Sbjct: 140 IIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRAP 187
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVV 213
E++ GY + D+WS+G ++
Sbjct: 188 EVILGM------GYKENVDIWSVGCIM 208
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + A
Sbjct: 140 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 187
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ IL G Y + E G E
Sbjct: 188 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 241
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
Q + + ++ + Y FP+ + S+ +A+DL+ ++LV D
Sbjct: 242 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 301
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
KR+S L+HP+I+ A PQ+ + RE
Sbjct: 302 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 340
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 18/87 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + AP
Sbjct: 141 IIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRAP 188
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVV 213
E++ GY + D+WS+G ++
Sbjct: 189 EVILGM------GYKENVDIWSVGCIM 209
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + A
Sbjct: 140 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 187
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ IL G Y + E G E
Sbjct: 188 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 241
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
Q + + ++ + Y FP+ + S+ +A+DL+ ++LV D
Sbjct: 242 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 301
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
KR+S L+HP+I+ A PQ+ + RE
Sbjct: 302 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 340
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 18/87 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + AP
Sbjct: 141 IIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRAP 188
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVV 213
E++ GY + D+WS+G ++
Sbjct: 189 EVILGM------GYKENVDIWSVGCIM 209
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 95/219 (43%), Gaps = 42/219 (19%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + A
Sbjct: 146 GIIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVV------YILLCG--YPPFYGNCGEDCGWQRGE 364
PE++ GY + D+WS+G ++ IL G Y + E G E
Sbjct: 194 PEVILGM------GYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE 247
Query: 365 TCHACQEILFHSIQ-QGHYD-------FPEGEWSTISD-------EAKDLIRRLLVKDAR 409
Q + + ++ + Y FP+ + S+ +A+DL+ ++LV D
Sbjct: 248 FMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPA 307
Query: 410 KRLSAASVLKHPWIST-AGTAHRPLVTPQVIRRNQSARE 447
KR+S L+HP+I+ A PQ+ + RE
Sbjct: 308 KRISVDDALQHPYINVWYDPAEVEAPPPQIYDKQLDERE 346
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 18/87 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP NI+ V D +K+ DF L T+ S + TP ++T + AP
Sbjct: 147 IIHRDLKPSNIV-VKSD--CTLKILDFGLA-----RTAGTSFMMTPYVVT----RYYRAP 194
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVV 213
E++ GY + D+WS+G ++
Sbjct: 195 EVILGM------GYKENVDIWSVGCIM 215
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 25/183 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 164 NVLHRDLKPSNLLI---NTTCDLKICDFGLA---RIADPEHD--HTGFLTEXVATRWYRA 215
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGE 364
PEI+ + GY K D+WS+G ++ +L P F G D G E
Sbjct: 216 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270
Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
+ + + Q + W+ + +A DL+ R+L + KR++ L H
Sbjct: 271 DLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRMLTFNPNKRITVEEALAH 330
Query: 421 PWI 423
P++
Sbjct: 331 PYL 333
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 47/100 (47%), Gaps = 13/100 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 165 VLHRDLKPSNLLI---NTTCDLKICDFGLA---RIADPEHD--HTGFLTEXVATRWYRAP 216
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 217 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGK 251
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 77/168 (45%), Gaps = 36/168 (21%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
LF +GI +RDLK +N++ D +K+ DF + ++ + T
Sbjct: 134 LFFLQSKGIIYRDLKLDNVML---DSEGHIKIADFGMCK-----ENIWDGVTTKXF---C 182
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
G+ +++APEI+ Y K D W+ GV++Y +L G PF GED
Sbjct: 183 GTPDYIAPEII------AYQPYGKSVDWWAFGVLLYEMLAGQAPFE---GED-------- 225
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS 413
++ LF SI + + +P+ ++S EA + + L+ K KRL
Sbjct: 226 ----EDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRLG 265
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 17/103 (16%)
Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ K I +RDLK +N++ D +K+ DF + ++ + T G+ +
Sbjct: 138 QSKGIIYRDLKLDNVML---DSEGHIKIADFGMCK-----ENIWDGVTTKXF---CGTPD 186
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
++APEI+ Y K D W+ GV++Y +L G PF G
Sbjct: 187 YIAPEII------AYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 223
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 72/168 (42%), Gaps = 32/168 (19%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
L H Q+ I +RDLKPEN+L D V++ D L +K + A
Sbjct: 302 LEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYA-------- 350
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
G+ FMAPE++ +G E YD D ++LGV +Y ++ PF RGE
Sbjct: 351 GTPGFMAPELL---LGEE---YDFSVDYFALGVTLYEMIAARGPFRA---------RGEK 395
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLS 413
+ L + + +P+ S +KD LL KD KRL
Sbjct: 396 VENKE--LKQRVLEQAVTYPD----KFSPASKDFCEALLQKDPEKRLG 437
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 39/156 (25%)
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
H + I +RDLKPEN+L D V++ D L +K + A G
Sbjct: 303 EHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAGQTKTKGYA--------G 351
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 239
+ FMAPE++ +G E YD D ++LGV +Y ++ PF RGE
Sbjct: 352 TPGFMAPELL---LGEE---YDFSVDYFALGVTLYEMIAARGPFRA---------RGEKV 396
Query: 240 HACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPV 275
+E+ ++Q + +PD+ SP
Sbjct: 397 EN-KELKQRVLEQAV------------TYPDKFSPA 419
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 89/204 (43%), Gaps = 34/204 (16%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP N L V+ D +K+ DF L A + V + + A
Sbjct: 148 GIIHRDLKPGN-LAVNED--CELKILDFGLARQ-----------ADSEMXGXVVTRWYRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGE 364
PE++ +M Y + D+WS+G ++ ++ G F G+ D G E
Sbjct: 194 PEVILNWM-----RYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAE 248
Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
Q + +G + + ++++I S A +L+ ++LV DA +R++A L H
Sbjct: 249 FVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308
Query: 421 PWISTAGTAHRPLVTPQVIRRNQS 444
P+ + H PQV + + S
Sbjct: 309 PYFE---SLHDTEDEPQVQKYDDS 329
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 94/233 (40%), Gaps = 73/233 (31%)
Query: 41 VTSCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSR---SRVFKEVE 97
V + ++DL + +G GAY +V + V+ T + A+K + + P S R ++E+
Sbjct: 23 VRAVYRDL-----QPVGSGAYGAVCSAVDGRTGAKVAIKKLYR-PFQSELFAKRAYRELR 76
Query: 98 TFHHCQGHPNIIQLLEYYEDDENHE--------------------RHKR----------- 126
H + H N+I LL+ + DE + +H++
Sbjct: 77 LLKHMR-HENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVY 135
Query: 127 -------------IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPL 173
I HRDLKP N L V+ D +K+ DF L A
Sbjct: 136 QMLKGLRYIHAAGIIHRDLKPGN-LAVNED--CELKILDFGLARQ-----------ADSE 181
Query: 174 LLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ V + + APE++ +M Y + D+WS+G ++ ++ G F G+
Sbjct: 182 MXGXVVTRWYRAPEVILNWMR-----YTQTVDIWSVGCIMAEMITGKTLFKGS 229
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 80/215 (37%), Gaps = 35/215 (16%)
Query: 236 GETCHACQEILFHSIQ-------QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF 288
G Q+ LF I I HRD+KPENIL Q VKLCDF +
Sbjct: 120 GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILV---SQSGVVKLCDFGFARTLAA 176
Query: 289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
V+ V + + APE++ Y K D+W++G +V + G P
Sbjct: 177 PGEVYD--------DEVATRWYRAPELLVG-----DVKYGKAVDVWAIGCLVTEMFMGEP 223
Query: 349 PFYGNCGEDCGWQ----RGETCHACQEILFHSIQQGHYDFP--------EGEWSTISDEA 396
F G+ D + G QE+ + P E + +S+
Sbjct: 224 LFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVV 283
Query: 397 KDLIRRLLVKDARKRLSAASVLKHPWISTAGTAHR 431
DL ++ L D KR A +L H + G A R
Sbjct: 284 IDLAKKCLHIDPDKRPFCAELLHHDFFQMDGFAER 318
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KPENIL Q VKLCDF + V+ V + + AP
Sbjct: 145 IIHRDIKPENILV---SQSGVVKLCDFGFARTLAAPGEVYD--------DEVATRWYRAP 193
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ Y K D+W++G +V + G P F G+ D
Sbjct: 194 ELLVG-----DVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDID 232
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 80/184 (43%), Gaps = 31/184 (16%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRDLKP N+ V+ D +++ DF L A + V + + A
Sbjct: 143 GIIHRDLKPSNV-AVNED--CELRILDFGLARQ-----------ADEEMTGYVATRWYRA 188
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
PEI+ +M Y++ D+WS+G ++ LL G F G+ D + E
Sbjct: 189 PEIMLNWMH-----YNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPSPE 243
Query: 373 LFHSIQQGHYD--------FPEGEWSTISDEAK----DLIRRLLVKDARKRLSAASVLKH 420
+ I H P+ + S+I A DL+ R+LV D+ +R+SAA L H
Sbjct: 244 VLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRVSAAEALAH 303
Query: 421 PWIS 424
+ S
Sbjct: 304 AYFS 307
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 91/225 (40%), Gaps = 69/225 (30%)
Query: 50 RLKG-EILGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGH 105
RL+G +G GAY SV + + + AVK + + P S R ++E+ H + H
Sbjct: 21 RLQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSR-PFQSLIHARRTYRELRLLKHLK-H 78
Query: 106 PNIIQLLEYY------ED-------------DENH--------ERHKR------------ 126
N+I LL+ + ED D N+ + H +
Sbjct: 79 ENVIGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKY 138
Query: 127 -----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
I HRDLKP N+ V+ D +++ DF L A + V +
Sbjct: 139 IHSAGIIHRDLKPSNV-AVNED--CELRILDFGLARQ-----------ADEEMTGYVATR 184
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ APEI+ +M Y++ D+WS+G ++ LL G F G+
Sbjct: 185 WYRAPEIMLNWMH-----YNQTVDIWSVGCIMAELLQGKALFPGS 224
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 77/174 (44%), Gaps = 28/174 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRD+KP NIL + +KLCDF V L + + VG+ +M+P
Sbjct: 126 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMSP 172
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG-YPPFYGNCGEDCGWQRGETCHACQEI 372
E + + + Y + D+WS+G+ + + G YP + ED A E+
Sbjct: 173 ERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDS-----RPPMAIFEL 221
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA 426
L + + + P G +S E +D + + L+K+ +R ++ H +I +
Sbjct: 222 LDYIVNEPPPKLPSGVFSL---EFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 272
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
E+HK I HRD+KP NIL + +KLCDF V L + + VG+
Sbjct: 121 REKHK-IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGT 166
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+M+PE + + + Y + D+WS+G+ + + G P
Sbjct: 167 RSYMSPERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
QGI HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 145 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 189
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 190 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 244
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
R E + ++ ++ F + +S EA D + +LL D
Sbjct: 245 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 304
Query: 409 RKRLSAASVLKHPWISTAGTA 429
++RL+A + HP+ A
Sbjct: 305 QERLTALEAMTHPYFQQVRAA 325
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 25/109 (22%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 147 IMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VASRY 191
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED 230
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 192 FKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 235
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
QGI HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 144 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 188
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 189 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
R E + ++ ++ F + +S EA D + +LL D
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 409 RKRLSAASVLKHPWISTAGTA 429
++RL+A + HP+ A
Sbjct: 304 QERLTALEAMTHPYFQQVRAA 324
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 25/109 (22%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 146 IMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VASRY 190
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED 230
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 191 FKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 234
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
QGI HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 145 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 189
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 190 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 244
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
R E + ++ ++ F + +S EA D + +LL D
Sbjct: 245 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 304
Query: 409 RKRLSAASVLKHPWISTAGTA 429
++RL+A + HP+ A
Sbjct: 305 QERLTALEAMTHPYFQQVRAA 325
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 25/109 (22%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 147 IMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VASRY 191
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED 230
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 192 FKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 235
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
QGI HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 144 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 188
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 189 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
R E + ++ ++ F + +S EA D + +LL D
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 409 RKRLSAASVLKHPWISTAGTA 429
++RL+A + HP+ A
Sbjct: 304 QERLTALEAMTHPYFQQVRAA 324
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 25/109 (22%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 146 IMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VASRY 190
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED 230
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 191 FKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 234
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
QGI HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 144 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 188
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 189 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
R E + ++ ++ F + +S EA D + +LL D
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 409 RKRLSAASVLKHPWISTAGTA 429
++RL+A + HP+ A
Sbjct: 304 QERLTALEAMTHPYFQQVRAA 324
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 25/109 (22%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 146 IMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VASRY 190
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED 230
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 191 FKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 234
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
QGI HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 144 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 188
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 189 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
R E + ++ ++ F + +S EA D + +LL D
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 409 RKRLSAASVLKHPWISTAGTA 429
++RL+A + HP+ A
Sbjct: 304 QERLTALEAMTHPYFQQVRAA 324
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 25/109 (22%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 146 IMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VASRY 190
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED 230
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 191 FKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 234
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
QGI HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 165 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 209
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 210 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 264
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
R E + ++ ++ F + +S EA D + +LL D
Sbjct: 265 GTDGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 324
Query: 409 RKRLSAASVLKHPWISTAGTA 429
++RL+A + HP+ A
Sbjct: 325 QERLTALEAMTHPYFQQVRAA 345
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 25/109 (22%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 167 IMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VASRY 211
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED 230
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 212 FKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 255
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D S +K+ DF L + + V + + AP
Sbjct: 152 IIHRDLKPSN-LAVNED--SELKILDFGLARHTDDEMTGY-----------VATRWYRAP 197
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 198 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 252
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 253 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 312
Query: 422 WIS 424
+ +
Sbjct: 313 YFA 315
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 81/218 (37%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 93
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D S +K+ DF L + + V + + APEI
Sbjct: 154 HRDLKPSN-LAVNED--SELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 199
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 200 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
QGI HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 144 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 188
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 189 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
R E + ++ ++ F + +S EA D + +LL D
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 409 RKRLSAASVLKHPWISTAGTA 429
++RL+A + HP+ A
Sbjct: 304 QERLTALEAMTHPYFQQVRAA 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 25/109 (22%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 146 IMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VASRY 190
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED 230
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 191 FKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 234
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 176 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 224
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 225 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 264
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 177 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRAP 225
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 226 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 264
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
QGI HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 146 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 190
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 191 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 245
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
R E + ++ ++ F + +S EA D + +LL D
Sbjct: 246 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 305
Query: 409 RKRLSAASVLKHPWISTAGTA 429
++RL+A + HP+ A
Sbjct: 306 QERLTALEAMTHPYFQQVRAA 326
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 25/109 (22%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 148 IMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VASRY 192
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED 230
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 193 FKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 236
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/201 (24%), Positives = 80/201 (39%), Gaps = 43/201 (21%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGS 307
QGI HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 144 QGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VAS 188
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED--------- 357
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 189 RYFKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVL 243
Query: 358 --------CGWQRGETCHACQEILFHSIQQGHYDFPEGE-WSTISDEAKDLIRRLLVKDA 408
R E + ++ ++ F + +S EA D + +LL D
Sbjct: 244 GTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLRYDH 303
Query: 409 RKRLSAASVLKHPWISTAGTA 429
++RL+A + HP+ A
Sbjct: 304 QERLTALEAMTHPYFQQVRAA 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 25/109 (22%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H +L ++L D+ L G ++N V S
Sbjct: 146 IMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVR-------------VASRY 190
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED 230
F PE++ + YD D+WSLG + ++ P FYG+ D
Sbjct: 191 FKGPELL-----VDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHD 234
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 81/218 (37%), Gaps = 56/218 (25%)
Query: 46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
+D + + GE+ G + V N T + A K+ID E++ C H
Sbjct: 11 EDFWEIIGEL---GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCD-H 66
Query: 106 PNIIQLLE--YYE---------------------------------------DDENHERH 124
PNI++LL+ YYE D N+
Sbjct: 67 PNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 126
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
+I HRDLK NIL +KL DF + + NT + TP +M
Sbjct: 127 NKIIHRDLKAGNILFTLD---GDIKLADFGVSAK---NTRTXIQRRDSFIGTPY----WM 176
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
APE+V + YD + D+WSLG+ + + PP
Sbjct: 177 APEVVMCETSKD-RPYDYKADVWSLGITLIEMAEIEPP 213
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 76/188 (40%), Gaps = 27/188 (14%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLA 297
C + L + I HRDLK NIL +KL DF + + NT
Sbjct: 113 VCKQTLDALNYLHDNKIIHRDLKAGNILFTLD---GDIKLADFGVSAK---NTRTXIQRR 166
Query: 298 TPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
+ TP +MAPE+V + YD + D+WSLG+ + + PP +
Sbjct: 167 DSFIGTPY----WMAPEVVMCETSKD-RPYDYKADVWSLGITLIEMAEIEPPHH------ 215
Query: 358 CGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASV 417
+ + +L + + WS+ KD +++ L K+ R + + +
Sbjct: 216 -------ELNPMRVLLKIAKSEPPTLAQPSRWSS---NFKDFLKKCLEKNVDARWTTSQL 265
Query: 418 LKHPWIST 425
L+HP+++
Sbjct: 266 LQHPFVTV 273
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 154 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 202
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 203 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 242
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 155 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRAP 203
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 204 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 242
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 142 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 191 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 143 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRAP 191
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 192 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D S +K+ DF L + + V + + AP
Sbjct: 148 IIHRDLKPSN-LAVNED--SELKILDFGLARHTDDEMTGY-----------VATRWYRAP 193
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 194 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 248
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 249 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 308
Query: 422 WIS 424
+ +
Sbjct: 309 YFA 311
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 81/218 (37%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 89
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D S +K+ DF L + + V + + APEI
Sbjct: 150 HRDLKPSN-LAVNED--SELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 195
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 196 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 161 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 209
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 210 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 249
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 162 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRAP 210
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 211 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 249
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPV--KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
I HRDL+ NI D+ +PV K+ DF L SVHS + LL G+ ++M
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLS-----QQSVHS--VSGLL----GNFQWM 193
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE + G E Y ++ D +S +++Y +L G PF
Sbjct: 194 APETI----GAEEESYTEKADTYSFAMILYTILTGEGPF 228
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPV--KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
I HRDL+ NI D+ +PV K+ DF L SVHS + LL G+ ++M
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFSLS-----QQSVHS--VSGLL----GNFQWM 193
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
APE + G E Y ++ D +S +++Y +L G PF
Sbjct: 194 APETI----GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + S +K+CDF L + H T L V + + A
Sbjct: 146 NVLHRDLKPSNLLL---NTTSDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 197
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 198 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252
Query: 372 ILFHSIQQGHYDF-------PEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L I ++ + W+ + +A DL+ ++L + KR+ L H
Sbjct: 253 DLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 421 PWIS 424
P+++
Sbjct: 313 PYLA 316
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 48/99 (48%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + S +K+CDF L + H T L V + + AP
Sbjct: 147 VLHRDLKPSNLLL---NTTSDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 198
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 199 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 150 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 198
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 199 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 238
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 151 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRAP 199
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 200 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 238
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 142 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 191 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 143 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRAP 191
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 192 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 154 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 202
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 203 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 242
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 155 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRAP 203
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 204 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 242
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 143 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 191
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 192 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 231
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 144 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRAP 192
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 193 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 231
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 83/219 (37%), Gaps = 71/219 (32%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQGHPN 107
LG GA+ V T V+ E VK I K + +V E+ + H N
Sbjct: 32 LGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVE-HAN 90
Query: 108 IIQLLEYYEDD-------ENH----------ERHKR------------------------ 126
II++L+ +E+ E H +RH R
Sbjct: 91 IIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKD 150
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+K ENI+ +KL DF GS L T G+ E+ AP
Sbjct: 151 IIHRDIKDENIVIAED---FTIKLIDF--GSAAYLERG-------KLFYTFCGTIEYCAP 198
Query: 187 EIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E++ N + GPE ++WSLGV +Y L+ PF
Sbjct: 199 EVLMGNPYRGPE-------LEMWSLGVTLYTLVFEENPF 230
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 47/101 (46%), Gaps = 21/101 (20%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ I HRD+K ENI+ +KL DF GS L T G+ E+
Sbjct: 149 KDIIHRDIKDENIVIAED---FTIKLIDF--GSAAYLERG-------KLFYTFCGTIEYC 196
Query: 312 APEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
APE++ N + GPE ++WSLGV +Y L+ PF
Sbjct: 197 APEVLMGNPYRGPE-------LEMWSLGVTLYTLVFEENPF 230
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 146 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 194
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 195 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 234
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 147 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRAP 195
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 196 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 234
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 142 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 191 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 143 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRAP 191
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 192 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 142 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 191 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 143 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSXICSRYYRAP 191
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 192 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKPEN+L + +KL DF L G+ T H V + +
Sbjct: 127 VLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 173
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 174 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 229 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 420 HPWI 423
HP+
Sbjct: 287 HPFF 290
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 55/127 (43%), Gaps = 20/127 (15%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEF 183
R+ HRDLKPEN+L + +KL DF L G+ T H V + +
Sbjct: 126 RVLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWY 172
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 243
APEI+ +G Y D+WSLG + ++ F G+ D ++ T
Sbjct: 173 RAPEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 227
Query: 244 EILFHSI 250
E+++ +
Sbjct: 228 EVVWPGV 234
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPV--KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
I HRDL+ NI D+ +PV K+ DF L SVHS + LL G+ ++M
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLS-----QQSVHS--VSGLL----GNFQWM 193
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE + G E Y ++ D +S +++Y +L G PF
Sbjct: 194 APETI----GAEEESYTEKADTYSFAMILYTILTGEGPF 228
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 51/99 (51%), Gaps = 17/99 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPV--KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
I HRDL+ NI D+ +PV K+ DF L SVHS + LL G+ ++M
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLS-----QQSVHS--VSGLL----GNFQWM 193
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
APE + G E Y ++ D +S +++Y +L G PF
Sbjct: 194 APETI----GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 131 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 177
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G + Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 178 APEIL---LGXKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 232
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 233 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
Query: 420 HPWI 423
HP+
Sbjct: 291 HPFF 294
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 88/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 14 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 72
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 73 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 132
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 133 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYRAP 179
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G + Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 180 EIL---LGXKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 234
Query: 247 F 247
+
Sbjct: 235 W 235
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 27/99 (27%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 183
HRD+K N+L + VKL DF + + IK NT V +P +
Sbjct: 143 HRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF-------------W 186
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
MAPE++ + S YD + D+WSLG+ L G PP
Sbjct: 187 MAPEVI------QQSAYDSKADIWSLGITAIELAKGEPP 219
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 27/99 (27%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 310
HRD+K N+L + VKL DF + + IK NT V +P +
Sbjct: 143 HRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF-------------W 186
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
MAPE++ + S YD + D+WSLG+ L G PP
Sbjct: 187 MAPEVI------QQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKPEN+L + +KL DF L G+ T H V + +
Sbjct: 126 VLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 172
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 173 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 227
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 228 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 420 HPWI 423
HP+
Sbjct: 286 HPFF 289
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 9 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 67
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 68 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKPEN+L + +KL DF L G+ T H V + + AP
Sbjct: 128 HRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYRAP 174
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 175 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 247 F 247
+
Sbjct: 230 W 230
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKPEN+L + +KL DF L G+ T H V + +
Sbjct: 125 VLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 171
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 172 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 227 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 420 HPWI 423
HP+
Sbjct: 285 HPFF 288
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 54/124 (43%), Gaps = 20/124 (16%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEF 183
R+ HRDLKPEN+L + +KL DF L G+ T H V + +
Sbjct: 124 RVLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWY 170
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 243
APEI+ +G Y D+WSLG + ++ F G+ D ++ T
Sbjct: 171 RAPEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 225
Query: 244 EILF 247
E+++
Sbjct: 226 EVVW 229
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKPEN+L + +KL DF L G+ T H V + +
Sbjct: 124 VLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 171 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWI 423
HP+
Sbjct: 284 HPFF 287
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIV 65
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKPEN+L + +KL DF L G+ T H V + + AP
Sbjct: 126 HRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYRAP 172
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 173 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 247 F 247
+
Sbjct: 228 W 228
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 147 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 195
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 196 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 235
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 148 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRAP 196
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 197 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 235
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 170 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 218
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 219 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 258
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 171 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRAP 219
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 220 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 258
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKPEN+L + +KL DF L G+ T H V + +
Sbjct: 125 VLHRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 171
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 172 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 227 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 420 HPWI 423
HP+
Sbjct: 285 HPFF 288
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 66
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKPEN+L + +KL DF L G+ T H V + + AP
Sbjct: 127 HRDLKPENLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYRAP 173
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 174 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 247 F 247
+
Sbjct: 229 W 229
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 81/184 (44%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 124 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G + Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 171 APEIL---LGXKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWI 423
HP+
Sbjct: 284 HPFF 287
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 88/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIV 65
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 126 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYRAP 172
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G + Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 173 EIL---LGXKY--YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 247 F 247
+
Sbjct: 228 W 228
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 76/181 (41%), Gaps = 31/181 (17%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS---PLATPLLLT 303
HS+ I HRDLKP NIL P+ +K D G K HS P
Sbjct: 134 LHSL--NIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVP---- 187
Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYGNCGEDCGWQR 362
G+ ++APE+++ E Y D++S G V Y ++ G PF G+ Q
Sbjct: 188 --GTEGWIAPEMLSEDC-KENPTYT--VDIFSAGCVFYYVISEGSHPF----GKSLQRQA 238
Query: 363 GETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPW 422
AC H PE I A++LI +++ D +KR SA VLKHP+
Sbjct: 239 NILLGACSLDCLH---------PEKHEDVI---ARELIEKMIAMDPQKRPSAKHVLKHPF 286
Query: 423 I 423
Sbjct: 287 F 287
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 59/154 (38%), Gaps = 26/154 (16%)
Query: 93 FKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCD 152
+ E + F H P I LL+ H I HRDLKP NIL P+ +K
Sbjct: 107 YVEQKDFAHLGLEP--ITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMI 164
Query: 153 FDLGSGIKFNTSVHS---PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSL 209
D G K HS P G+ ++APE+++ E Y D++S
Sbjct: 165 SDFGLCKKLAVGRHSFSRRSGVP------GTEGWIAPEMLSEDC-KENPTYT--VDIFSA 215
Query: 210 GVVVYILLC-GYPPF-----------YGNCGEDC 231
G V Y ++ G PF G C DC
Sbjct: 216 GCVFYYVISEGSHPFGKSLQRQANILLGACSLDC 249
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 221 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 269
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 270 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 309
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 222 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRAP 270
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 271 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 309
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 94/223 (42%), Gaps = 36/223 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WISTAGTAHRPLVTPQVIRRNQS--ARELSSFAESAMSANRVI 462
+ + H P P R+QS +R+L +++ + VI
Sbjct: 307 YFA---QYHDPDDEPVADPRDQSFESRDLLIDEWKSLTYDEVI 346
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 87
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 148 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 193
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 194 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 91/226 (40%), Gaps = 49/226 (21%)
Query: 248 HSIQQGIA--------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 299
H QG+A HRD+K NIL P VKL DF GS S+ +P
Sbjct: 161 HGALQGLAYLHSHNMIHRDVKAGNILLSEP---GLVKLGDF--GSA-----SIMAPANXF 210
Query: 300 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG 359
VG+ +MAPE++ A + YD + D+WSLG+ L PP +
Sbjct: 211 -----VGTPYWMAPEVILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFN------- 255
Query: 360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK 419
L+H Q G W S+ ++ + L K + R ++ +LK
Sbjct: 256 -------MNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLK 305
Query: 420 HPWISTAGTAHRPLVTPQVIRRNQSA-RELSSFAESAMSANRVILQ 464
H ++ P V +I+R + A REL + M +++ Q
Sbjct: 306 HRFVL---RERPPTVIMDLIQRTKDAVRELDNLQYRKM--KKILFQ 346
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 47/98 (47%), Gaps = 18/98 (18%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRD+K NIL P VKL DF GS S+ +P VG+ +MAP
Sbjct: 175 MIHRDVKAGNILLSEP---GLVKLGDF--GSA-----SIMAPANXF-----VGTPYWMAP 219
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
E++ A + YD + D+WSLG+ L PP +
Sbjct: 220 EVILAM---DEGQYDGKVDVWSLGITCIELAERKPPLF 254
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 176 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 224
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 225 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 264
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 177 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRAP 225
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 226 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 264
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 142 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 191 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 143 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRAP 191
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 192 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 178 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 226
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 227 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 266
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 179 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRAP 227
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 228 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 266
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 155 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 203
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 204 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 243
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 156 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRAP 204
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 205 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 243
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 180 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 228
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 229 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 268
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 181 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRAP 229
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 230 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 268
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 142 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 191 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 143 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRAP 191
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 192 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
GI HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + A
Sbjct: 142 GICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
PE++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 191 PELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 16/104 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRD+KP+N+L + PD + +KLCDF GS + + ++ + S + AP
Sbjct: 143 ICHRDIKPQNLL-LDPDT-AVLKLCDF--GSAKQLVRGEPN-------VSYICSRYYRAP 191
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ A+ Y D+WS G V+ LL G P F G+ G D
Sbjct: 192 ELIFG-----ATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVD 230
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS-PLATPLLLTP-VGSAEF 310
+ HRDLKP N+L + +K+CDF L I + + +S P +T V + +
Sbjct: 132 NVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWY 188
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF------------YGNCG--- 355
APE++ ++ Y + D+WS G ++ L P F +G G
Sbjct: 189 RAPEVMLT-----SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA 415
D + E+ A + I S+ E + ++ + DL++R+LV D KR++A
Sbjct: 244 SDNDLRCIESPRAREYI--KSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAK 301
Query: 416 SVLKHPWIST 425
L+HP++ T
Sbjct: 302 EALEHPYLQT 311
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS-PLATPLLLTP-VGSAEFM 184
+ HRDLKP N+L + +K+CDF L I + + +S P +T V + +
Sbjct: 133 VIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYR 189
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
APE++ ++ Y + D+WS G ++ L P F G
Sbjct: 190 APEVMLT-----SAKYSRAMDVWSCGCILAELFLRRPIFPG 225
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS-PLATPLLLTP-VGSAEF 310
+ HRDLKP N+L + +K+CDF L I + + +S P +T V + +
Sbjct: 132 NVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWY 188
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF------------YGNCG--- 355
APE++ ++ Y + D+WS G ++ L P F +G G
Sbjct: 189 RAPEVMLT-----SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA 415
D + E+ A + I S+ E + ++ + DL++R+LV D KR++A
Sbjct: 244 SDNDLRCIESPRAREYI--KSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAK 301
Query: 416 SVLKHPWIST 425
L+HP++ T
Sbjct: 302 EALEHPYLQT 311
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS-PLATPLLLTP-VGSAEFM 184
+ HRDLKP N+L + +K+CDF L I + + +S P +T V + +
Sbjct: 133 VIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYR 189
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
APE++ ++ Y + D+WS G ++ L P F G
Sbjct: 190 APEVMLT-----SAKYSRAMDVWSCGCILAELFLRRPIFPG 225
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 87/219 (39%), Gaps = 47/219 (21%)
Query: 248 HSIQQGIA--------HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 299
H QG+A HRD+K NIL P VKL DF GS S+ +P
Sbjct: 122 HGALQGLAYLHSHNMIHRDVKAGNILLSEP---GLVKLGDF--GSA-----SIMAPANXF 171
Query: 300 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCG 359
VG+ +MAPE++ A + YD + D+WSLG+ L PP +
Sbjct: 172 -----VGTPYWMAPEVILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFN------- 216
Query: 360 WQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK 419
L+H Q G W S+ ++ + L K + R ++ +LK
Sbjct: 217 -------MNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLK 266
Query: 420 HPWISTAGTAHRPLVTPQVIRRNQSA-RELSSFAESAMS 457
H ++ P V +I+R + A REL + M
Sbjct: 267 HRFVLRERP---PTVIMDLIQRTKDAVRELDNLQYRKMK 302
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 47/99 (47%), Gaps = 18/99 (18%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRD+K NIL P VKL DF GS S+ +P VG+ +MAP
Sbjct: 136 MIHRDVKAGNILLSEP---GLVKLGDF--GSA-----SIMAPANXF-----VGTPYWMAP 180
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
E++ A + YD + D+WSLG+ L PP +
Sbjct: 181 EVILAM---DEGQYDGKVDVWSLGITCIELAERKPPLFN 216
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 123 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 169
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 170 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 225 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 420 HPWI 423
HP+
Sbjct: 283 HPFF 286
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 88/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIV 64
Query: 110 QLLE--------YYEDDENHERHK---------------------------------RIA 128
+LL+ Y + H+ K R+
Sbjct: 65 KLLDVIHTENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 125 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYRAP 171
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 172 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 247 F 247
+
Sbjct: 227 W 227
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 124 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 171 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWI 423
HP+
Sbjct: 284 HPFF 287
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 20/124 (16%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEF 183
R+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 123 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWY 169
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 243
APEI+ +G Y D+WSLG + ++ F G+ D ++ T
Sbjct: 170 RAPEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 224
Query: 244 EILF 247
E+++
Sbjct: 225 EVVW 228
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 34/185 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 124 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 171 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWIS 424
HP+
Sbjct: 284 HPFFQ 288
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIV 65
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 126 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYRAP 172
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 173 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 247 F 247
+
Sbjct: 228 W 228
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 123 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 169
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 170 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 225 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 420 HPWI 423
HP+
Sbjct: 283 HPFF 286
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 20/124 (16%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEF 183
R+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 122 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWY 168
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 243
APEI+ +G Y D+WSLG + ++ F G+ D ++ T
Sbjct: 169 RAPEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 223
Query: 244 EILF 247
E+++
Sbjct: 224 EVVW 227
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 124 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 171 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWI 423
HP+
Sbjct: 284 HPFF 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 65
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 126 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYRAP 172
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 173 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 247 F 247
+
Sbjct: 228 W 228
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 34/185 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 123 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 169
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 170 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 225 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 420 HPWIS 424
HP+
Sbjct: 283 HPFFQ 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIV 64
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 125 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYRAP 171
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 172 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 247 F 247
+
Sbjct: 227 W 227
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 131 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 177
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 178 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 232
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 233 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 290
Query: 420 HPWI 423
HP+
Sbjct: 291 HPFF 294
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/244 (23%), Positives = 88/244 (36%), Gaps = 64/244 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 14 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 72
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 73 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 132
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 133 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYRAP 179
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 180 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 234
Query: 247 FHSI 250
+ +
Sbjct: 235 WPGV 238
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 78/171 (45%), Gaps = 30/171 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KP N+L + L VK+CDF + SG ++ + A G +MAP
Sbjct: 175 VIHRDVKPSNVLI---NALGQVKMCDFGI-SGYLVDSVAKTIDA--------GCKPYMAP 222
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E +N + GY + D+WSLG+ + L P+ W G +++
Sbjct: 223 ERINPELN--QKGYSVKSDIWSLGITMIELAILRFPY-------DSW--GTPFQQLKQV- 270
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
+++ P ++S E D + L K++++R + +++HP+ +
Sbjct: 271 ---VEEPSPQLPADKFSA---EFVDFTSQCLKKNSKERPTYPELMQHPFFT 315
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 14/90 (15%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRD+KP N+L + L VK+CDF + SG ++ + A G +MAP
Sbjct: 175 VIHRDVKPSNVLI---NALGQVKMCDFGI-SGYLVDSVAKTIDA--------GCKPYMAP 222
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYIL 216
E +N + GY + D+WSLG+ + L
Sbjct: 223 ERINPELN--QKGYSVKSDIWSLGITMIEL 250
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 125 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 171
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 172 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 227 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 420 HPWI 423
HP+
Sbjct: 285 HPFF 288
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 66
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 127 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYRAP 173
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 174 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 247 F 247
+
Sbjct: 229 W 229
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 124 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 171 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWI 423
HP+
Sbjct: 284 HPFF 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIV 65
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVL 125
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 126 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYRAP 172
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 173 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 247 F 247
+
Sbjct: 228 W 228
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 123 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 169
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 170 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 225 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 420 HPWI 423
HP+
Sbjct: 283 HPFF 286
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIV 64
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 125 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYRAP 171
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 172 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 247 F 247
+
Sbjct: 227 W 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 74/184 (40%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 144 NVLHRDLKPSNLLL---NTTXDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 195
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-----CGWQRGETCH 367
PEI+ + GY K D+WS+G ++ +L P F G D G +
Sbjct: 196 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 368 ACQEILFHSIQQGHYDFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
I+ + P W+ + +A DL+ ++L + KR+ L H
Sbjct: 251 DLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 421 PWIS 424
P++
Sbjct: 311 PYLE 314
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 145 VLHRDLKPSNLLL---NTTXDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 196
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 197 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--XELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
+ +
Sbjct: 307 YFA 309
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 83/218 (38%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 87
Query: 113 EYYE--------------------DDENHERHKR------------------------IA 128
+ + D N + ++ I
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 148 HRDLKPSN-LAVNED--XELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 193
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 194 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 34/185 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 128 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYR 174
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 175 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 229
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 230 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287
Query: 420 HPWIS 424
HP+
Sbjct: 288 HPFFQ 292
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 11 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIV 69
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 70 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 129
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 130 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHE----------VVTLWYRAP 176
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 177 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 231
Query: 247 F 247
+
Sbjct: 232 W 232
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 35/183 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
++GI +RDLK +N+L D +KL D+ + G++ + + TP
Sbjct: 171 ERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP---------N 218
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
++APEI+ Y D W+LGV+++ ++ G PF D
Sbjct: 219 YIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPF------DIVGSSDNPDQNT 266
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA------ASVLKHPWI 423
++ LF I + P ++S +A +++ L KD ++RL A + HP+
Sbjct: 267 EDYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 322
Query: 424 STA 426
Sbjct: 323 RNV 325
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 86/223 (38%), Gaps = 64/223 (28%)
Query: 45 FQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSR---VFKEVETFHH 101
QD L+ ++G+G+YA V T+ YA++++ K + V E F
Sbjct: 51 LQDFDLLR--VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQ 108
Query: 102 CQGHPNIIQL-------------LEYYEDD-------------ENHER------------ 123
HP ++ L +EY E H R
Sbjct: 109 ASNHPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNY 168
Query: 124 -HKR-IAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGS 180
H+R I +RDLK +N+L D +KL D+ + G++ + + TP
Sbjct: 169 LHERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSTFCGTP-------- 217
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
++APEI+ Y D W+LGV+++ ++ G PF
Sbjct: 218 -NYIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPF 253
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D S +K+ DF L + + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--SELKILDFGLCRHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
+ +
Sbjct: 307 YFA 309
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 84/218 (38%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 87
Query: 113 EYYE--------------------DDENHERHKR------------------------IA 128
+ + D N + ++ I
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D S +K+ DF L + + V + + APEI
Sbjct: 148 HRDLKPSN-LAVNED--SELKILDFGLCRHTDDEMTGY-----------VATRWYRAPEI 193
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 194 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 151 IIHRDLKPSN-LAVNED--XELKILDFGLARHTDDEMTGY-----------VATRWYRAP 196
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 197 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 251
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 252 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 311
Query: 422 WIS 424
+ +
Sbjct: 312 YFA 314
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 92
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 153 HRDLKPSN-LAVNED--XELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 198
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 199 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 151 IIHRDLKPSN-LAVNED--XELKILDFGLARHTDDEMTGY-----------VATRWYRAP 196
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 197 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 251
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 252 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 311
Query: 422 WIS 424
+ +
Sbjct: 312 YFA 314
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 92
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 153 HRDLKPSN-LAVNED--XELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 198
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 199 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 157 IIHRDLKPSN-LAVNED--XELKILDFGLARHTDDEMTGY-----------VATRWYRAP 202
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 203 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 257
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 258 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 317
Query: 422 WIS 424
+ +
Sbjct: 318 YFA 320
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 98
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 158
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 159 HRDLKPSN-LAVNED--XELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 204
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 205 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 237
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 127 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 173
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 174 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 229 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 420 HPWI 423
HP+
Sbjct: 287 HPFF 290
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 68
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 69 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 129 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYRAP 175
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 176 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 247 F 247
+
Sbjct: 231 W 231
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 126 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 172
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 173 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 227
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 228 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 420 HPWI 423
HP+
Sbjct: 286 HPFF 289
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 9 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 67
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 68 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 128 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYRAP 174
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 175 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 247 F 247
+
Sbjct: 230 W 230
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 27/99 (27%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 183
HRD+K N+L + VKL DF + + IK NT V +P +
Sbjct: 127 HRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-------------W 170
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
MAPE++ + S YD + D+WSLG+ L G PP
Sbjct: 171 MAPEVI------KQSAYDSKADIWSLGITAIELARGEPP 203
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 27/99 (27%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 310
HRD+K N+L + VKL DF + + IK NT V +P +
Sbjct: 127 HRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-------------W 170
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
MAPE++ + S YD + D+WSLG+ L G PP
Sbjct: 171 MAPEVI------KQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 35/172 (20%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
HRD+K NIL + KL DF + + + + + +G+ +MAPE+
Sbjct: 148 HRDIKAGNILL---NTEGHAKLADFGVAGQLTDXMAKRNXV--------IGTPFWMAPEV 196
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEI-LF 374
+ GY+ D+WSLG+ + G PP+ H + I +
Sbjct: 197 IQEI------GYNCVADIWSLGITAIEMAEGKPPY-------------ADIHPMRAIFMI 237
Query: 375 HSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA 426
+ + PE W SD D +++ LVK +R +A +L+HP++ +A
Sbjct: 238 PTNPPPTFRKPEL-W---SDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSA 285
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 44/98 (44%), Gaps = 17/98 (17%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
R HRD+K NIL + KL DF + + + + + +G+ +MA
Sbjct: 145 RKIHRDIKAGNILL---NTEGHAKLADFGVAGQLTDXMAKRNXV--------IGTPFWMA 193
Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
PE++ GY+ D+WSLG+ + G PP+
Sbjct: 194 PEVIQEI------GYNCVADIWSLGITAIEMAEGKPPY 225
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 125 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 171
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 172 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 227 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 420 HPWI 423
HP+
Sbjct: 285 HPFF 288
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 66
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 127 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYRAP 173
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 174 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 247 F 247
+
Sbjct: 229 W 229
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 127 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 173
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 174 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 229 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 420 HPWI 423
HP+
Sbjct: 287 HPFF 290
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 68
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 69 KLLDVIHTENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 129 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYRAP 175
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 176 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 247 F 247
+
Sbjct: 231 W 231
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 126 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 172
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 173 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 227
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 228 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 420 HPWI 423
HP+
Sbjct: 286 HPFF 289
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 9 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 67
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 68 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 127
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 128 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYRAP 174
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 175 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 247 F 247
+
Sbjct: 230 W 230
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 124 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 171 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWI 423
HP+
Sbjct: 284 HPFF 287
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIV 65
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 126 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYRAP 172
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 173 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 247 F 247
+
Sbjct: 228 W 228
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 34/185 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 123 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 169
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 170 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 225 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 420 HPWIS 424
HP+
Sbjct: 283 HPFFQ 287
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIV 64
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 125 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYRAP 171
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 172 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 247 F 247
+
Sbjct: 227 W 227
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 78/184 (42%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 128 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 174
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 175 APEILLG-----CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 229
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 230 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 287
Query: 420 HPWI 423
HP+
Sbjct: 288 HPFF 291
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 85/241 (35%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 11 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 69
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 70 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 129
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 130 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYRAP 176
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 177 EILLG-----CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 231
Query: 247 F 247
+
Sbjct: 232 W 232
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 124 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 171 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWI 423
HP+
Sbjct: 284 HPFF 287
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIV 65
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 126 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYRAP 172
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 173 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 247 F 247
+
Sbjct: 228 W 228
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 90/222 (40%), Gaps = 67/222 (30%)
Query: 46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
QD Y+L + LG+G Y+ V +NI + VKI+ + ++++ +E++ + +G
Sbjct: 36 QDDYQLVRK-LGRGKYSEVFEAINITNNEKVVVKILKPV---KKNKIKREIKILENLRGG 91
Query: 106 PNIIQLLEYYED-----------DENHERHKR---------------------------- 126
PNII L + +D N+ K+
Sbjct: 92 PNIITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYMYEILKALDYCHSMG 151
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 152 IMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASRY 196
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
F PE++ + YD D+WSLG ++ ++ PF+
Sbjct: 197 FKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF 233
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
GI HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
F PE++ + YD D+WSLG ++ ++ PF+ G D Q
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFH--GHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
E L+ I + + + W +S EA D + +LL D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
+ RL+A ++HP+ T
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 124 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 171 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWI 423
HP+
Sbjct: 284 HPFF 287
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIV 65
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 126 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYRAP 172
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 173 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 247 F 247
+
Sbjct: 228 W 228
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 127 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 173
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 174 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 229 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 420 HPWI 423
HP+
Sbjct: 287 HPFF 290
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 20/124 (16%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEF 183
R+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 126 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWY 172
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 243
APEI+ +G Y D+WSLG + ++ F G+ D ++ T
Sbjct: 173 RAPEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 227
Query: 244 EILF 247
E+++
Sbjct: 228 EVVW 231
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 49/104 (47%), Gaps = 28/104 (26%)
Query: 124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPV 178
K+I HRD+K N+L + VKL DF + + IK NT V +P
Sbjct: 143 EKKI-HRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF--------- 189
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
+MAPE++ + S YD + D+WSLG+ L G PP
Sbjct: 190 ----WMAPEVI------KQSAYDSKADIWSLGITAIELARGEPP 223
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 46/99 (46%), Gaps = 27/99 (27%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 310
HRD+K N+L + VKL DF + + IK NT V +P +
Sbjct: 147 HRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNTFVGTPF-------------W 190
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
MAPE++ + S YD + D+WSLG+ L G PP
Sbjct: 191 MAPEVI------KQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 127 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 173
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 174 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 229 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 420 HPWI 423
HP+
Sbjct: 287 HPFF 290
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 68
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 69 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 129 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYRAP 175
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 176 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 247 F 247
+
Sbjct: 231 W 231
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 34/185 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 125 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 171
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 172 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 226
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 227 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 284
Query: 420 HPWIS 424
HP+
Sbjct: 285 HPFFQ 289
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 66
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 67 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 126
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 127 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYRAP 173
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 174 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 247 F 247
+
Sbjct: 229 W 229
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 127 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 173
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 174 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 228
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 229 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 286
Query: 420 HPWI 423
HP+
Sbjct: 287 HPFF 290
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 89/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN-HPNIV 68
Query: 110 QLLE-----------YYEDDENHERHK------------------------------RIA 128
+LL+ + D++ ++ R+
Sbjct: 69 KLLDVIHTENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 128
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 129 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYRAP 175
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 176 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 247 F 247
+
Sbjct: 231 W 231
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
GI HRD+KP N+L H + ++L D+ L G ++N V S
Sbjct: 151 GIMHRDVKPHNVLIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
F PE++ + YD D+WSLG ++ ++ PF+ G D Q
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
E L+ I + + + W +S EA D + +LL D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
+ RL+A ++HP+ T
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N+L H + ++L D+ L G ++N V S
Sbjct: 152 IMHRDVKPHNVLIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASRY 196
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
F PE++ + YD D+WSLG ++ ++ PF+
Sbjct: 197 FKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF 233
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 126 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 172
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 173 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 227
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 228 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 285
Query: 420 HPWI 423
HP+
Sbjct: 286 HPFF 289
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 20/124 (16%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEF 183
R+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 125 RVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWY 171
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 243
APEI+ +G Y D+WSLG + ++ F G+ D ++ T
Sbjct: 172 RAPEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 226
Query: 244 EILF 247
E+++
Sbjct: 227 EVVW 230
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 80/185 (43%), Gaps = 34/185 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 123 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 169
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 170 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 224
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 225 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 420 HPWIS 424
HP+
Sbjct: 283 HPFFQ 287
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIV 64
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 65 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 124
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 125 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYRAP 171
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 172 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 247 F 247
+
Sbjct: 227 W 227
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 21/107 (19%)
Query: 127 IAHRDLKPENILC---VHPDQLSP--VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 181
I HRDLK NIL V LS +K+ DF L T ++ G+
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK----------MSAAGAY 178
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
+MAPE++ A M + K D+WS GV+++ LL G PF G G
Sbjct: 179 AWMAPEVIRASM------FSKGSDVWSYGVLLWELLTGEVPFRGIDG 219
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 50/107 (46%), Gaps = 21/107 (19%)
Query: 254 IAHRDLKPENILC---VHPDQLSP--VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSA 308
I HRDLK NIL V LS +K+ DF L T ++ G+
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTK----------MSAAGAY 178
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
+MAPE++ A M + K D+WS GV+++ LL G PF G G
Sbjct: 179 AWMAPEVIRASM------FSKGSDVWSYGVLLWELLTGEVPFRGIDG 219
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 18/111 (16%)
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
H ++ + +RDLKP NIL D+ V++ D G+ + S P A+ VG
Sbjct: 305 EHMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------VG 351
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
+ +MAPE++ + YD D +SLG +++ LL G+ PF + +D
Sbjct: 352 THGYMAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 397
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 34/167 (20%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
L H + + +RDLKP NIL D+ V++ D G+ + S P A+ V
Sbjct: 304 LEHMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------V 350
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
G+ +MAPE++ + YD D +SLG +++ LL G+ PF + +D
Sbjct: 351 GTHGYMAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK------- 398
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
H I + + S E + L+ LL +D +RL
Sbjct: 399 ---------HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL 436
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 80/184 (43%), Gaps = 34/184 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L + +KL DF L G+ T H V + +
Sbjct: 124 VLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYR 170
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
APEI+ +G Y D+WSLG + ++ F G+ D ++ T E
Sbjct: 171 APEIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDE 225
Query: 372 ILF---HSIQQGHYDFPEGEWST---------ISDEAKDLIRRLLVKDARKRLSAASVLK 419
+++ S+ FP+ W+ + ++ + L+ ++L D KR+SA + L
Sbjct: 226 VVWPGVTSMPDYKPSFPK--WARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 283
Query: 420 HPWI 423
HP+
Sbjct: 284 HPFF 287
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 87/241 (36%), Gaps = 64/241 (26%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKII--DKLPGHSRSRVFKEVETFHHCQGHPNII 109
K E +G+G Y V N LT A+K I D S +E+ HPNI+
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL-NHPNIV 65
Query: 110 QLLEYYEDDEN--------HERHK---------------------------------RIA 128
+LL+ + H+ K R+
Sbjct: 66 KLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVL 125
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
HRDLKP+N+L + +KL DF L G+ T H V + + AP
Sbjct: 126 HRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYXHE----------VVTLWYRAP 172
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 246
EI+ +G Y D+WSLG + ++ F G+ D ++ T E++
Sbjct: 173 EIL---LG--CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 247 F 247
+
Sbjct: 228 W 228
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 18/111 (16%)
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
H ++ + +RDLKP NIL D+ V++ D G+ + S P A+ VG
Sbjct: 306 EHMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------VG 352
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
+ +MAPE++ + YD D +SLG +++ LL G+ PF + +D
Sbjct: 353 THGYMAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 34/167 (20%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
L H + + +RDLKP NIL D+ V++ D G+ + S P A+ V
Sbjct: 305 LEHMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------V 351
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
G+ +MAPE++ + YD D +SLG +++ LL G+ PF + +D
Sbjct: 352 GTHGYMAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK------- 399
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
H I + + S E + L+ LL +D +RL
Sbjct: 400 ---------HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL 437
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 86/190 (45%), Gaps = 27/190 (14%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS-PLATPL-LLTPVGSAEF 310
+ HRDLKP N+L + +K+CDF L I + + +S P ++ V + +
Sbjct: 132 NVIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWY 188
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF------------YGNCG--- 355
APE++ ++ Y + D+WS G ++ L P F +G G
Sbjct: 189 RAPEVMLT-----SAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH 243
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA 415
D + E+ A + I S+ E + ++ + DL++R+LV D KR++A
Sbjct: 244 SDNDLRCIESPRAREYI--KSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAK 301
Query: 416 SVLKHPWIST 425
L+HP++ T
Sbjct: 302 EALEHPYLQT 311
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 10/101 (9%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS-PLATPL-LLTPVGSAEFM 184
+ HRDLKP N+L + +K+CDF L I + + +S P ++ V + +
Sbjct: 133 VIHRDLKPSNLLI---NSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYR 189
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
APE++ ++ Y + D+WS G ++ L P F G
Sbjct: 190 APEVMLT-----SAKYSRAMDVWSCGCILAELFLRRPIFPG 225
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 164 NVLHRDLKPSNLLL---NTTXDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 215
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 216 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 271 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 330
Query: 421 PWIS 424
P++
Sbjct: 331 PYLE 334
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 165 VLHRDLKPSNLLL---NTTXDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 216
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 217 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 18/111 (16%)
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
H ++ + +RDLKP NIL D+ V++ D G+ + S P A+ VG
Sbjct: 306 EHMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------VG 352
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
+ +MAPE++ + YD D +SLG +++ LL G+ PF + +D
Sbjct: 353 THGYMAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 34/167 (20%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
L H + + +RDLKP NIL D+ V++ D G+ + S P A+ V
Sbjct: 305 LEHMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------V 351
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
G+ +MAPE++ + YD D +SLG +++ LL G+ PF + +D
Sbjct: 352 GTHGYMAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK------- 399
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
H I + + S E + L+ LL +D +RL
Sbjct: 400 ---------HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL 437
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 18/111 (16%)
Query: 120 NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
H ++ + +RDLKP NIL D+ V++ D G+ + S P A+ VG
Sbjct: 306 EHMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------VG 352
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
+ +MAPE++ + YD D +SLG +++ LL G+ PF + +D
Sbjct: 353 THGYMAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 34/167 (20%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
L H + + +RDLKP NIL D+ V++ D G+ + S P A+ V
Sbjct: 305 LEHMHNRFVVYRDLKPANILL---DEHGHVRISDL----GLACDFSKKKPHAS------V 351
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
G+ +MAPE++ + YD D +SLG +++ LL G+ PF + +D
Sbjct: 352 GTHGYMAPEVLQ-----KGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK------- 399
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL 412
H I + + S E + L+ LL +D +RL
Sbjct: 400 ---------HEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRL 437
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
+ +
Sbjct: 307 YFA 309
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 87
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 148 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 193
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 194 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
+ +
Sbjct: 307 YFA 309
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 87
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 148 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 193
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 194 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
+ +
Sbjct: 307 YFA 309
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 87
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 148 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 193
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 194 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
GI HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
F PE++ + YD D+WSLG ++ ++ PF+ G D Q
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFH--GHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
E L+ I + + + W +S EA D + +LL D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
+ RL+A ++HP+ T
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 152 IMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRV-------------ASRY 196
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
F PE++ + YD D+WSLG ++ ++ PF+
Sbjct: 197 FKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF 233
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 148 NVLHRDLKPSNLLL---NTTXDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 199
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 200 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 421 PWIS 424
P++
Sbjct: 315 PYLE 318
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 149 VLHRDLKPSNLLL---NTTXDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 200
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 201 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
+ +
Sbjct: 307 YFA 309
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 87
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 148 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 193
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 194 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
GI HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 150 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 194
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
F PE++ + YD D+WSLG ++ ++ PF+ G D Q
Sbjct: 195 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFH--GHDNYDQLVRIAKV 247
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
E L+ I + + + W +S EA D + +LL D
Sbjct: 248 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 307
Query: 408 ARKRLSAASVLKHPWISTA 426
+ RL+A ++HP+ T
Sbjct: 308 HQSRLTAREAMEHPYFYTV 326
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 151 IMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRV-------------ASRY 195
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
F PE++ + YD D+WSLG ++ ++ PF+
Sbjct: 196 FKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF 232
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
GI HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
F PE++ + YD D+WSLG ++ ++ PF+ G D Q
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFH--GHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
E L+ I + + + W +S EA D + +LL D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
+ RL+A ++HP+ T
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 152 IMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRV-------------ASRY 196
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
F PE++ + YD D+WSLG ++ ++ PF+
Sbjct: 197 FKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF 233
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
GI HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
F PE++ + YD D+WSLG ++ ++ PF+ G D Q
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFH--GHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
E L+ I + + + W +S EA D + +LL D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
+ RL+A ++HP+ T
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 152 IMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRV-------------ASRY 196
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
F PE++ + YD D+WSLG ++ ++ PF+
Sbjct: 197 FKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF 233
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 153 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 198
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 199 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 253
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313
Query: 422 WIS 424
+ +
Sbjct: 314 YFA 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 94
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 155 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 200
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 201 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 148 NVLHRDLKPSNLLL---NTTXDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 199
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 200 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 421 PWIS 424
P++
Sbjct: 315 PYLE 318
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 149 VLHRDLKPSNLLL---NTTXDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 200
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 201 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 153 IIHRDLKPSN-LAVNED--CELKILDFGLARHTADEMTGY-----------VATRWYRAP 198
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 199 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 253
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313
Query: 422 WIS 424
+ +
Sbjct: 314 YFA 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 94
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 155 HRDLKPSN-LAVNED--CELKILDFGLARHTADEMTGY-----------VATRWYRAPEI 200
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 201 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
GI HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
F PE++ + YD D+WSLG ++ ++ PF+ G D Q
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFH--GHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
E L+ I + + + W +S EA D + +LL D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
+ RL+A ++HP+ T
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 152 IMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRV-------------ASRY 196
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
F PE++ + YD D+WSLG ++ ++ PF+
Sbjct: 197 FKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF 233
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 169 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 214
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 215 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 269
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 270 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 329
Query: 422 WIS 424
+ +
Sbjct: 330 YFA 332
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 110
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 170
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 171 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 216
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 217 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 249
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
+ +
Sbjct: 307 YFA 309
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 83/218 (38%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 87
Query: 113 EYYE--------------------DDENHERHKR------------------------IA 128
+ + D N + ++ I
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 148 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 193
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 194 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 151 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 196
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 197 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 251
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 252 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 311
Query: 422 WIS 424
+ +
Sbjct: 312 YFA 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 92
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 153 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 198
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 199 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 145 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 190
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 191 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 245
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 246 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 305
Query: 422 WIS 424
+ +
Sbjct: 306 YFA 308
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 86
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 87 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 146
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 147 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 192
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 193 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 225
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
+ +
Sbjct: 307 YFA 309
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 87
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 148 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 193
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 194 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 153 IIHRDLKPSN-LAVNED--CELKILDFGLARHTADEMTGY-----------VATRWYRAP 198
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 199 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 253
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313
Query: 422 WIS 424
+ +
Sbjct: 314 YFA 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 94
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 155 HRDLKPSN-LAVNED--CELKILDFGLARHTADEMTGY-----------VATRWYRAPEI 200
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 201 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 17/99 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPV--KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
I HRDL+ NI D+ +PV K+ DF SVHS + LL G+ ++M
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTS-----QQSVHS--VSGLL----GNFQWM 193
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE + G E Y ++ D +S +++Y +L G PF
Sbjct: 194 APETI----GAEEESYTEKADTYSFAMILYTILTGEGPF 228
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 17/99 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPV--KLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
I HRDL+ NI D+ +PV K+ DF SVHS + LL G+ ++M
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTS-----QQSVHS--VSGLL----GNFQWM 193
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
APE + G E Y ++ D +S +++Y +L G PF
Sbjct: 194 APETI----GAEEESYTEKADTYSFAMILYTILTGEGPF 228
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 82/219 (37%), Gaps = 57/219 (26%)
Query: 46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
+++ + GE LG GA+ V N T A K+I+ E+E C H
Sbjct: 10 NEVWEIVGE-LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD-H 67
Query: 106 PNIIQLL-EYYEDDE----------------------------------------NHERH 124
P I++LL YY D + N
Sbjct: 68 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 127
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGS-GIKFNTSVHSPLATPLLLTPVGSAEF 183
KRI HRDLK N+L ++L DF + + +K S + TP +
Sbjct: 128 KRIIHRDLKAGNVLMTLE---GDIRLADFGVSAKNLKTLQKRDSFIGTPY---------W 175
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
MAPE+V + + YD + D+WSLG+ + + PP
Sbjct: 176 MAPEVVMCETMKD-TPYDYKADIWSLGITLIEMAQIEPP 213
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 32/200 (16%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS-GIKFNTSVHSPL 296
C E L + I HRDLK N+L ++L DF + + +K S +
Sbjct: 114 VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLE---GDIRLADFGVSAKNLKTLQKRDSFI 170
Query: 297 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 356
TP +MAPE+V + + YD + D+WSLG+ + + PP +
Sbjct: 171 GTPY---------WMAPEVVMCETMKD-TPYDYKADIWSLGITLIEMAQIEPPHH----- 215
Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
+ + +L + +WS E +D ++ L K+ R SAA
Sbjct: 216 --------ELNPMRVLLKIAKSDPPTLLTPSKWSV---EFRDFLKIALDKNPETRPSAAQ 264
Query: 417 VLKHPWIS--TAGTAHRPLV 434
+L+HP++S T+ A R LV
Sbjct: 265 LLEHPFVSSITSNKALRELV 284
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 166 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 211
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 212 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 266
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 267 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 326
Query: 422 WIS 424
+ +
Sbjct: 327 YFA 329
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 107
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 108 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 167
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 168 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 213
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 214 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 148 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 193
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 194 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 248
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 249 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 308
Query: 422 WIS 424
+ +
Sbjct: 309 YFA 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 89
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 150 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 195
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 196 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 153 IIHRDLKPSN-LAVNED--CELKILDFGLARHTADEMTGY-----------VATRWYRAP 198
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 199 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 253
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 254 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 313
Query: 422 WIS 424
+ +
Sbjct: 314 YFA 316
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 94
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 95 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 154
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 155 HRDLKPSN-LAVNED--CELKILDFGLARHTADEMTGY-----------VATRWYRAPEI 200
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 201 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 233
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 144 NVLHRDLKPSNLLL---NTTXDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 195
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 196 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 251 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 421 PWIS 424
P++
Sbjct: 311 PYLE 314
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 145 VLHRDLKPSNLLL---NTTXDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 196
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 197 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
+ +
Sbjct: 307 YFA 309
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 87
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 148 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 193
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 194 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 148 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 193
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 194 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 248
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 249 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 308
Query: 422 WIS 424
+ +
Sbjct: 309 YFA 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 89
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 150 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 195
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 196 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 152 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 197
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 198 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 252
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 253 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 312
Query: 422 WIS 424
+ +
Sbjct: 313 YFA 315
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 93
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 154 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 199
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 200 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 151 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 196
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 197 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 251
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 252 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 311
Query: 422 WIS 424
+ +
Sbjct: 312 YFA 314
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 92
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 93 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 152
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 153 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 198
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 199 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 231
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 19/103 (18%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCD--FDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
RI HRDLKPENI+ Q P +L DLG + + L T VG+ ++
Sbjct: 141 RIIHRDLKPENIVL----QPGPQRLIHKIIDLGYAKELD---QGELCTEF----VGTLQY 189
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+APE++ E Y D WS G + + + G+ PF N
Sbjct: 190 LAPELL------EQKKYTVTVDYWSFGTLAFECITGFRPFLPN 226
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 25/142 (17%)
Query: 217 LCGYPPFYGNCGEDCGWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQLS 273
L Y + NC CG + G +I L + + I HRDLKPENI+ Q
Sbjct: 105 LRKYLNQFENC---CGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL----QPG 157
Query: 274 PVKLCD--FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC 331
P +L DLG + + L T VG+ +++APE++ E Y
Sbjct: 158 PQRLIHKIIDLGYAKELD---QGELCTEF----VGTLQYLAPELL------EQKKYTVTV 204
Query: 332 DLWSLGVVVYILLCGYPPFYGN 353
D WS G + + + G+ PF N
Sbjct: 205 DYWSFGTLAFECITGFRPFLPN 226
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 165 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 210
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 211 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 265
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 266 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 325
Query: 422 WIS 424
+ +
Sbjct: 326 YFA 328
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 106
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 107 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 166
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 167 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 212
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 213 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 245
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 48/103 (46%), Gaps = 19/103 (18%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCD--FDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
RI HRDLKPENI+ Q P +L DLG + + L T VG+ ++
Sbjct: 142 RIIHRDLKPENIVL----QPGPQRLIHKIIDLGYAKELD---QGELCTEF----VGTLQY 190
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+APE++ E Y D WS G + + + G+ PF N
Sbjct: 191 LAPELL------EQKKYTVTVDYWSFGTLAFECITGFRPFLPN 227
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 61/142 (42%), Gaps = 25/142 (17%)
Query: 217 LCGYPPFYGNCGEDCGWQRGETCHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQLS 273
L Y + NC CG + G +I L + + I HRDLKPENI+ Q
Sbjct: 106 LRKYLNQFENC---CGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVL----QPG 158
Query: 274 PVKLCD--FDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRC 331
P +L DLG + + L T VG+ +++APE++ E Y
Sbjct: 159 PQRLIHKIIDLGYAKELD---QGELCTEF----VGTLQYLAPELL------EQKKYTVTV 205
Query: 332 DLWSLGVVVYILLCGYPPFYGN 353
D WS G + + + G+ PF N
Sbjct: 206 DYWSFGTLAFECITGFRPFLPN 227
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
GI HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 149 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 193
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
F PE++ + YD D+WSLG ++ ++ PF+ G D Q
Sbjct: 194 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFH--GHDNYDQLVRIAKV 246
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
E L+ I + + + W +S EA D + +LL D
Sbjct: 247 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 306
Query: 408 ARKRLSAASVLKHPWISTA 426
+ RL+A ++HP+ T
Sbjct: 307 HQSRLTAREAMEHPYFYTV 325
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 150 IMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRV-------------ASRY 194
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
F PE++ + YD D+WSLG ++ ++ PF+
Sbjct: 195 FKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF 231
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
GI HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
F PE++ + YD D+WSLG ++ ++ PF+ G D Q
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
E L+ I + + + W +S EA D + +LL D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
+ RL+A ++HP+ T
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 152 IMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRV-------------ASRY 196
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
F PE++ + YD D+WSLG ++ ++ PF+
Sbjct: 197 FKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF 233
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 166 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 211
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 212 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 266
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 267 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 326
Query: 422 WIS 424
+ +
Sbjct: 327 YFA 329
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 19/100 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 166 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 211
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 212 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
GI HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
F PE++ + YD D+WSLG ++ ++ PF+ G D Q
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
E L+ I + + + W +S EA D + +LL D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
+ RL+A ++HP+ T
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 152 IMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRV-------------ASRY 196
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
F PE++ + YD D+WSLG ++ ++ PF+
Sbjct: 197 FKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF 233
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 143 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 188
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 189 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 243
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 244 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 303
Query: 422 WIS 424
+ +
Sbjct: 304 YFA 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 84
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 144
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 145 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 190
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 191 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 223
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 158 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 203
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 204 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 258
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 259 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 318
Query: 422 WIS 424
+ +
Sbjct: 319 YFA 321
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 99
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 159
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 160 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 205
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 206 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
GI HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
F PE++ + YD D+WSLG ++ ++ PF+ G D Q
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
E L+ I + + + W +S EA D + +LL D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
+ RL+A ++HP+ T
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 152 IMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRV-------------ASRY 196
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
F PE++ + YD D+WSLG ++ ++ PF+
Sbjct: 197 FKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF 233
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 158 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 203
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 204 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 258
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 259 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 318
Query: 422 WIS 424
+ +
Sbjct: 319 YFA 321
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + K P S R ++E+ H + H N+I LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSK-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 99
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 159
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 160 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 205
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 206 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 158 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 203
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 204 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 258
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 259 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 318
Query: 422 WIS 424
+ +
Sbjct: 319 YFA 321
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 99
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 100 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 159
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 160 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 205
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 206 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 238
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 148 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 193
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 194 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 248
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 249 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 308
Query: 422 WIS 424
+ +
Sbjct: 309 YFA 311
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 89
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 90 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 149
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 150 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 195
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 196 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 228
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 143 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 188
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 189 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 243
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 244 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 303
Query: 422 WIS 424
+ +
Sbjct: 304 YFA 306
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 84
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 85 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 144
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 145 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 190
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 191 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 223
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 144 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 189
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 190 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 244
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 245 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 304
Query: 422 WIS 424
+ +
Sbjct: 305 YFA 307
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 85
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 86 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 145
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 146 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 191
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 192 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 224
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
GI HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 156 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 200
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
F PE++ + YD D+WSLG ++ ++ PF+ G D Q
Sbjct: 201 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKV 253
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
E L+ I + + + W +S EA D + +LL D
Sbjct: 254 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 313
Query: 408 ARKRLSAASVLKHPWISTA 426
+ RL+A ++HP+ T
Sbjct: 314 HQSRLTAREAMEHPYFYTV 332
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 157 IMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRV-------------ASRY 201
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
F PE++ + YD D+WSLG ++ ++ PF+
Sbjct: 202 FKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF 238
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 82/219 (37%), Gaps = 57/219 (26%)
Query: 46 QDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGH 105
+++ + GE LG GA+ V N T A K+I+ E+E C H
Sbjct: 18 NEVWEIVGE-LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCD-H 75
Query: 106 PNIIQLL-EYYEDDE----------------------------------------NHERH 124
P I++LL YY D + N
Sbjct: 76 PYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQMLEALNFLHS 135
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGS-GIKFNTSVHSPLATPLLLTPVGSAEF 183
KRI HRDLK N+L ++L DF + + +K S + TP +
Sbjct: 136 KRIIHRDLKAGNVLMTLE---GDIRLADFGVSAKNLKTLQKRDSFIGTPY---------W 183
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
MAPE+V + + YD + D+WSLG+ + + PP
Sbjct: 184 MAPEVVMCETMKD-TPYDYKADIWSLGITLIEMAQIEPP 221
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 84/200 (42%), Gaps = 32/200 (16%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS-GIKFNTSVHSPL 296
C E L + I HRDLK N+L ++L DF + + +K S +
Sbjct: 122 VCRQMLEALNFLHSKRIIHRDLKAGNVLMTLE---GDIRLADFGVSAKNLKTLQKRDSFI 178
Query: 297 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGE 356
TP +MAPE+V + + YD + D+WSLG+ + + PP +
Sbjct: 179 GTPY---------WMAPEVVMCETMKD-TPYDYKADIWSLGITLIEMAQIEPPHH----- 223
Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
+ + +L + +WS E +D ++ L K+ R SAA
Sbjct: 224 --------ELNPMRVLLKIAKSDPPTLLTPSKWSV---EFRDFLKIALDKNPETRPSAAQ 272
Query: 417 VLKHPWIS--TAGTAHRPLV 434
+L+HP++S T+ A R LV
Sbjct: 273 LLEHPFVSSITSNKALRELV 292
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 79/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 146 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 197
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 198 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 253 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 421 PWIS 424
P+++
Sbjct: 313 PYLA 316
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 147 VLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 198
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 199 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
GI HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
F PE++ + YD D+WSLG ++ ++ PF+ G D Q
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
E L+ I + + + W +S EA D + +LL D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWISTA 426
+ RL+A ++HP+ T
Sbjct: 309 HQSRLTAREAMEHPYFYTV 327
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 152 IMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRV-------------ASRY 196
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
F PE++ + YD D+WSLG ++ ++ PF+
Sbjct: 197 FKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF 233
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 152 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 197
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 198 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 252
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 253 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 312
Query: 422 WIS 424
+ +
Sbjct: 313 YFA 315
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 93
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 94 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 153
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 154 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 199
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 200 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 148 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLXEXVATRWYRA 199
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 200 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 421 PWIS 424
P++
Sbjct: 315 PYLE 318
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 149 VLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLXEXVATRWYRAP 200
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 201 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 149 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLXEXVATRWYRA 200
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 201 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 255
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 256 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 315
Query: 421 PWIS 424
P++
Sbjct: 316 PYLE 319
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 150 VLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLXEXVATRWYRAP 201
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 202 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 235
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 76/193 (39%), Gaps = 40/193 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ G+ HRDL P NIL + ++ +CDF+L A V +
Sbjct: 152 EAGVVHRDLHPGNILLADNNDIT---ICDFNLAR---------EDTADANKTHYVTHRWY 199
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG--------EDCGWQR 362
APE+V F G+ K D+WS G V+ + F G+ E G +
Sbjct: 200 RAPELVMQF-----KGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK 254
Query: 363 GETCHACQEILFHSIQQGHY------DFPEGEWSTISDEAK----DLIRRLLVKDARKRL 412
E ++F S Y + P W+ + A DLI ++L + ++R+
Sbjct: 255 IEDV-----VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRI 309
Query: 413 SAASVLKHPWIST 425
S L+HP+ +
Sbjct: 310 STEQALRHPYFES 322
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 17/101 (16%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDL P NIL + ++ +CDF+L A V + AP
Sbjct: 155 VVHRDLHPGNILLADNNDIT---ICDFNLAR---------EDTADANKTHYVTHRWYRAP 202
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
E+V F G+ K D+WS G V+ + F G+
Sbjct: 203 ELVMQF-----KGFTKLVDMWSAGCVMAEMFNRKALFRGST 238
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 156 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 201
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 202 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 256
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 257 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 316
Query: 422 WIS 424
+ +
Sbjct: 317 YFA 319
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 19/100 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 156 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 201
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 202 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 236
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 76/193 (39%), Gaps = 40/193 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ G+ HRDL P NIL + ++ +CDF+L A V +
Sbjct: 152 EAGVVHRDLHPGNILLADNNDIT---ICDFNLAR---------EDTADANKTHYVTHRWY 199
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG--------EDCGWQR 362
APE+V F G+ K D+WS G V+ + F G+ E G +
Sbjct: 200 RAPELVMQF-----KGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPK 254
Query: 363 GETCHACQEILFHSIQQGHY------DFPEGEWSTISDEAK----DLIRRLLVKDARKRL 412
E ++F S Y + P W+ + A DLI ++L + ++R+
Sbjct: 255 IEDV-----VMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRI 309
Query: 413 SAASVLKHPWIST 425
S L+HP+ +
Sbjct: 310 STEQALRHPYFES 322
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 41/101 (40%), Gaps = 17/101 (16%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDL P NIL + ++ +CDF+L A V + AP
Sbjct: 155 VVHRDLHPGNILLADNNDIT---ICDFNLAR---------EDTADANKTHYVTHRWYRAP 202
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNC 227
E+V F G+ K D+WS G V+ + F G+
Sbjct: 203 ELVMQF-----KGFTKLVDMWSAGCVMAEMFNRKALFRGST 238
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 247 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
+ +
Sbjct: 307 YFA 309
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 19/100 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 157 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 202
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 203 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 257
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 258 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 317
Query: 422 WIS 424
+ +
Sbjct: 318 YFA 320
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 98
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 99 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 158
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 159 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 204
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 205 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 237
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 78/199 (39%), Gaps = 47/199 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
GI HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 150 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 194
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
F PE++ + YD D+WSLG ++ ++ PF+ G D Q
Sbjct: 195 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF--HGHDNYDQLVRIAKV 247
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
E L+ I + + + W +S EA D + +LL D
Sbjct: 248 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 307
Query: 408 ARKRLSAASVLKHPWISTA 426
+ RL+A ++HP+ T
Sbjct: 308 HQSRLTAREAMEHPYFYTV 326
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 151 IMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRV-------------ASRY 195
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
F PE++ + YD D+WSLG ++ ++ PF+
Sbjct: 196 FKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF 232
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 142 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 187
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 188 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 242
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 243 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 302
Query: 422 WIS 424
+ +
Sbjct: 303 YFA 305
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 19/100 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 142 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 187
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 188 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 165 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 210
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 211 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 265
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 266 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 325
Query: 422 WIS 424
+ +
Sbjct: 326 YFA 328
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 19/100 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 165 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 210
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 211 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 245
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 35/183 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
++GI +RDLK +N+L D +KL D+ + G++ + TP
Sbjct: 128 ERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP---------N 175
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
++APEI+ Y D W+LGV+++ ++ G PF D
Sbjct: 176 YIAPEIL------RGEDYGFSVDWWALGVLMFEMMAGRSPF------DIVGSSDNPDQNT 223
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL------SAASVLKHPWI 423
++ LF I + P ++S +A +++ L KD ++RL A + HP+
Sbjct: 224 EDYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 279
Query: 424 STA 426
Sbjct: 280 RNV 282
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 80/213 (37%), Gaps = 62/213 (29%)
Query: 55 ILGKGAYASVQTCVNILTELEYAVKIIDKL---PGHSRSRVFKEVETFHHCQGHPNIIQL 111
++G+G+YA V T+ YA+K++ K V E F HP ++ L
Sbjct: 16 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 75
Query: 112 -------------LEYYEDD-------------ENHER-------------HKR-IAHRD 131
+EY E H R H+R I +RD
Sbjct: 76 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRD 135
Query: 132 LKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
LK +N+L D +KL D+ + G++ + TP ++APEI+
Sbjct: 136 LKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP---------NYIAPEIL- 182
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
Y D W+LGV+++ ++ G PF
Sbjct: 183 -----RGEDYGFSVDWWALGVLMFEMMAGRSPF 210
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 142 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 187
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 188 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 242
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 243 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 302
Query: 422 WIS 424
+ +
Sbjct: 303 YFA 305
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 19/100 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 142 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 187
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 188 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 35/183 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
++GI +RDLK +N+L D +KL D+ + G++ + TP
Sbjct: 124 ERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP---------N 171
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
++APEI+ Y D W+LGV+++ ++ G PF D
Sbjct: 172 YIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPF------DIVGSSDNPDQNT 219
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRL------SAASVLKHPWI 423
++ LF I + P ++S +A +++ L KD ++RL A + HP+
Sbjct: 220 EDYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFF 275
Query: 424 STA 426
Sbjct: 276 RNV 278
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 81/213 (38%), Gaps = 62/213 (29%)
Query: 55 ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSR---VFKEVETFHHCQGHPNIIQL 111
++G+G+YA V T+ YA+K++ K + V E F HP ++ L
Sbjct: 12 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 71
Query: 112 -------------LEYYEDD-------------ENHER-------------HKR-IAHRD 131
+EY E H R H+R I +RD
Sbjct: 72 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRD 131
Query: 132 LKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
LK +N+L D +KL D+ + G++ + TP ++APEI+
Sbjct: 132 LKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP---------NYIAPEILR 179
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
Y D W+LGV+++ ++ G PF
Sbjct: 180 G------EDYGFSVDWWALGVLMFEMMAGRSPF 206
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 142 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 187
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 188 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 242
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 243 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 302
Query: 422 WIS 424
+ +
Sbjct: 303 YFA 305
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 83
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 84 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 143
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 144 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 189
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 190 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 152 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 197
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 198 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 252
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 253 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 312
Query: 422 WIS 424
+ +
Sbjct: 313 YFA 315
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 19/100 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 152 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 197
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 198 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 232
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 73/174 (41%), Gaps = 45/174 (25%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 310
HRD+K N+L + VKL DF + + IK N V +P +
Sbjct: 139 HRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNXFVGTPF-------------W 182
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
MAPE++ + S YD + D+WSLG+ L G PP H +
Sbjct: 183 MAPEVI------KQSAYDFKADIWSLGITAIELAKGEPP-------------NSDLHPMR 223
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
+LF I + EG+ S K+ + L KD R R +A +LKH +I+
Sbjct: 224 -VLF-LIPKNSPPTLEGQHSK---PFKEFVEACLNKDPRFRPTAKELLKHKFIT 272
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 27/103 (26%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVG 179
+R HRD+K N+L + VKL DF + + IK N V +P
Sbjct: 135 ERKIHRDIKAANVLL---SEQGDVKLADFGVAGQLTDTQIKRNXFVGTPF---------- 181
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
+MAPE++ + S YD + D+WSLG+ L G PP
Sbjct: 182 ---WMAPEVI------KQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 76/183 (41%), Gaps = 35/183 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAE 309
++GI +RDLK +N+L D +KL D+ + G++ + TP
Sbjct: 139 ERGIIYRDLKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP---------N 186
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHAC 369
++APEI+ Y D W+LGV+++ ++ G PF D
Sbjct: 187 YIAPEILRG------EDYGFSVDWWALGVLMFEMMAGRSPF------DIVGSSDNPDQNT 234
Query: 370 QEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSA------ASVLKHPWI 423
++ LF I + P ++S +A +++ L KD ++RL A + HP+
Sbjct: 235 EDYLFQVILEKQIRIPR----SMSVKAASVLKSFLNKDPKERLGCLPQTGFADIQGHPFF 290
Query: 424 STA 426
Sbjct: 291 RNV 293
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 81/213 (38%), Gaps = 62/213 (29%)
Query: 55 ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSR---VFKEVETFHHCQGHPNIIQL 111
++G+G+YA V T+ YA+K++ K + V E F HP ++ L
Sbjct: 27 VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL 86
Query: 112 -------------LEYYEDD-------------ENHER-------------HKR-IAHRD 131
+EY E H R H+R I +RD
Sbjct: 87 HSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRD 146
Query: 132 LKPENILCVHPDQLSPVKLCDFDL-GSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVN 190
LK +N+L D +KL D+ + G++ + TP ++APEI+
Sbjct: 147 LKLDNVLL---DSEGHIKLTDYGMCKEGLRPGDTTSXFCGTP---------NYIAPEILR 194
Query: 191 AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
Y D W+LGV+++ ++ G PF
Sbjct: 195 G------EDYGFSVDWWALGVLMFEMMAGRSPF 221
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT-----------GXVATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
+ +
Sbjct: 307 YFA 309
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 79/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 87
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + V + + APEI
Sbjct: 148 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMT-----------GXVATRWYRAPEI 193
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 194 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 144 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 195
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 196 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 251 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 421 PWIS 424
P++
Sbjct: 311 PYLE 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 145 VLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 196
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 197 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 142 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 194 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 248
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 249 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 308
Query: 421 PWIS 424
P++
Sbjct: 309 PYLE 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 143 VLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 194
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 195 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ A Y++ D+WS+G ++ LL G F G D G E
Sbjct: 192 EIM-----LNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
+ +
Sbjct: 307 YFA 309
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 79/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 87
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 148 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 193
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ A Y++ D+WS+G ++ LL G F G
Sbjct: 194 M-----LNAMHYNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 148 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 199
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 200 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 421 PWIS 424
P++
Sbjct: 315 PYLE 318
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 149 VLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 200
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 201 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 36/184 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ G HRD+K NIL + V++ DF + + F + + T VG+ +
Sbjct: 139 KNGQIHRDVKAGNILL---GEDGSVQIADFGVSA---FLATGGDITRNKVRKTFVGTPCW 192
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
MAPE++ + GYD + D+WS G+ L G P++ +
Sbjct: 193 MAPEVME-----QVRGYDFKADIWSFGITAIELATGAAPYHK--------------YPPM 233
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEA--------KDLIRRLLVKDARKRLSAASVLKHPW 422
++L ++Q D P E E + +I L KD KR +AA +L+H +
Sbjct: 234 KVLMLTLQN---DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 290
Query: 423 ISTA 426
A
Sbjct: 291 FQKA 294
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 89/232 (38%), Gaps = 64/232 (27%)
Query: 43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIID-KLPGHSRSRVFKEVETFHH 101
S +D Y L+ E++G GA A VQ + + A+K I+ + S + KE++
Sbjct: 11 SINRDDYELQ-EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQ 69
Query: 102 CQGHPNIIQ-------------------------------------------------LL 112
C HPNI+ L
Sbjct: 70 CH-HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 128
Query: 113 EYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 172
E E E ++ +I HRD+K NIL + V++ DF + + F +
Sbjct: 129 EVLEGLEYLHKNGQI-HRDVKAGNILL---GEDGSVQIADFGVSA---FLATGGDITRNK 181
Query: 173 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
+ T VG+ +MAPE++ + GYD + D+WS G+ L G P++
Sbjct: 182 VRKTFVGTPCWMAPEVME-----QVRGYDFKADIWSFGITAIELATGAAPYH 228
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFYLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
+ +
Sbjct: 307 YFA 309
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 19/100 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFYLARHTDDEMTGY-----------VATRWYRAP 191
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 152 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 203
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 204 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 258
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 259 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 318
Query: 421 PWIS 424
P++
Sbjct: 319 PYLE 322
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 153 VLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 204
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 205 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 238
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 144 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 195
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 196 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 251 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 421 PWIS 424
P++
Sbjct: 311 PYLE 314
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 145 VLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 196
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 197 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 164 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 215
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 216 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 271 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 330
Query: 421 PWIS 424
P++
Sbjct: 331 PYLE 334
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 165 VLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 216
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 217 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 250
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 146 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 197
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 198 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 253 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 312
Query: 421 PWIS 424
P++
Sbjct: 313 PYLE 316
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 147 VLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 198
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 199 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 232
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 149 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 200
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 201 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 255
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 256 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 315
Query: 421 PWIS 424
P++
Sbjct: 316 PYLE 319
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 150 VLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 201
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 202 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 235
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 150 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 201
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 202 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 256
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 257 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 316
Query: 421 PWIS 424
P++
Sbjct: 317 PYLE 320
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 151 VLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 202
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 203 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 236
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 141 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 192
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 193 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 247
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 248 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 307
Query: 421 PWIS 424
P++
Sbjct: 308 PYLE 311
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 142 VLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 193
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 194 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 227
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 148 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 199
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 200 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 421 PWIS 424
P++
Sbjct: 315 PYLE 318
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 149 VLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 200
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 201 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 76/184 (41%), Gaps = 36/184 (19%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
+ G HRD+K NIL + V++ DF + + F + + T VG+ +
Sbjct: 134 KNGQIHRDVKAGNILL---GEDGSVQIADFGVSA---FLATGGDITRNKVRKTFVGTPCW 187
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQ 370
MAPE++ + GYD + D+WS G+ L G P++ +
Sbjct: 188 MAPEVME-----QVRGYDFKADIWSFGITAIELATGAAPYHK--------------YPPM 228
Query: 371 EILFHSIQQGHYDFPEGEWSTISDEA--------KDLIRRLLVKDARKRLSAASVLKHPW 422
++L ++Q D P E E + +I L KD KR +AA +L+H +
Sbjct: 229 KVLMLTLQN---DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKF 285
Query: 423 ISTA 426
A
Sbjct: 286 FQKA 289
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 89/232 (38%), Gaps = 64/232 (27%)
Query: 43 SCFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIID-KLPGHSRSRVFKEVETFHH 101
S +D Y L+ E++G GA A VQ + + A+K I+ + S + KE++
Sbjct: 6 SINRDDYELQ-EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQ 64
Query: 102 CQGHPNIIQ-------------------------------------------------LL 112
C HPNI+ L
Sbjct: 65 CH-HPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILR 123
Query: 113 EYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATP 172
E E E ++ +I HRD+K NIL + V++ DF + + F +
Sbjct: 124 EVLEGLEYLHKNGQI-HRDVKAGNILL---GEDGSVQIADFGVSA---FLATGGDITRNK 176
Query: 173 LLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
+ T VG+ +MAPE++ + GYD + D+WS G+ L G P++
Sbjct: 177 VRKTFVGTPCWMAPEVME-----QVRGYDFKADIWSFGITAIELATGAAPYH 223
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + V + + AP
Sbjct: 166 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDE-----------MXGXVATRWYRAP 211
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 212 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 266
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 267 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 326
Query: 422 WIS 424
+ +
Sbjct: 327 YFA 329
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 19/100 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP N L V+ D +K+ DF L + V + + AP
Sbjct: 166 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDE-----------MXGXVATRWYRAP 211
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 212 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 246
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + V + + AP
Sbjct: 169 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMXGY-----------VATRWYRAP 214
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 215 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 269
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 270 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 329
Query: 422 WIS 424
+ +
Sbjct: 330 YFA 332
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 79/217 (36%), Gaps = 68/217 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 110
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 111 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 170
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + V + + APEI
Sbjct: 171 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMXGY-----------VATRWYRAPEI 216
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 217 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPG 248
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 148 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 199
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 200 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 255 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 314
Query: 421 PWIS 424
P++
Sbjct: 315 PYLE 318
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 149 VLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 200
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 201 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 234
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 27/99 (27%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 183
HRD+K N+L + VKL DF + + IK N V +P +
Sbjct: 142 HRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-------------W 185
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
MAPE++ + S YD + D+WSLG+ L G PP
Sbjct: 186 MAPEVI------KQSAYDSKADIWSLGITAIELARGEPP 218
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 27/99 (27%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 310
HRD+K N+L + VKL DF + + IK N V +P +
Sbjct: 142 HRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-------------W 185
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
MAPE++ + S YD + D+WSLG+ L G PP
Sbjct: 186 MAPEVI------KQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 77/171 (45%), Gaps = 30/171 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KP N+L + L VK+CDF + SG + A G +MAP
Sbjct: 131 VIHRDVKPSNVLI---NALGQVKMCDFGI-SGYLVDDVAKDIDA--------GCKPYMAP 178
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E +N + + GY + D+WSLG+ + L P+ W G +++
Sbjct: 179 ERINPELNQK--GYSVKSDIWSLGITMIELAILRFPY-------DSW--GTPFQQLKQV- 226
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
+++ P ++S E D + L K++++R + +++HP+ +
Sbjct: 227 ---VEEPSPQLPADKFSA---EFVDFTSQCLKKNSKERPTYPELMQHPFFT 271
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%), Gaps = 14/87 (16%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRD+KP N+L + L VK+CDF + SG + A G +MAP
Sbjct: 131 VIHRDVKPSNVLI---NALGQVKMCDFGI-SGYLVDDVAKDIDA--------GCKPYMAP 178
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVV 213
E +N + + GY + D+WSLG+ +
Sbjct: 179 ERINPELNQK--GYSVKSDIWSLGITM 203
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ D+ L + + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDYGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
+ +
Sbjct: 307 YFA 309
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 80/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 87
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ D+ L + + V + + APEI
Sbjct: 148 HRDLKPSN-LAVNED--CELKILDYGLARHTDDEMTGY-----------VATRWYRAPEI 193
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 194 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMAGF-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
+ +
Sbjct: 307 YFA 309
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 19/100 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP N L V+ D +K+ DF L + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMAGF-----------VATRWYRAP 191
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 23/126 (18%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
H EI + IAHRDLK +NIL Q C DLG + +HS
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQC-----CIADLGLAV-----MHSQSTN 168
Query: 299 PLLLTP---VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY----------ILLC 345
L + VG+ +MAPE+++ + + KR D+W+ G+V++ I+
Sbjct: 169 QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVED 228
Query: 346 GYPPFY 351
PPFY
Sbjct: 229 YKPPFY 234
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 23/111 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP---VGSAEF 183
IAHRDLK +NIL Q C DLG + +HS L + VG+ +
Sbjct: 134 IAHRDLKSKNILVKKNGQC-----CIADLGLAV-----MHSQSTNQLDVGNNPRVGTKRY 183
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVY----------ILLCGYPPFY 224
MAPE+++ + + KR D+W+ G+V++ I+ PPFY
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 27/99 (27%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 183
HRD+K N+L + VKL DF + + IK N V +P +
Sbjct: 127 HRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-------------W 170
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
MAPE++ + S YD + D+WSLG+ L G PP
Sbjct: 171 MAPEVI------KQSAYDSKADIWSLGITAIELARGEPP 203
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 27/99 (27%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-----SGIKFNTSVHSPLATPLLLTPVGSAEF 310
HRD+K N+L + VKL DF + + IK N V +P +
Sbjct: 127 HRDIKAANVLL---SEHGEVKLADFGVAGQLTDTQIKRNXFVGTPF-------------W 170
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 349
MAPE++ + S YD + D+WSLG+ L G PP
Sbjct: 171 MAPEVI------KQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 23/126 (18%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
H EI + IAHRDLK +NIL Q C DLG + +HS
Sbjct: 119 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQC-----CIADLGLAV-----MHSQSTN 168
Query: 299 PLLLTP---VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY----------ILLC 345
L + VG+ +MAPE+++ + + KR D+W+ G+V++ I+
Sbjct: 169 QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVED 228
Query: 346 GYPPFY 351
PPFY
Sbjct: 229 YKPPFY 234
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 23/111 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP---VGSAEF 183
IAHRDLK +NIL Q C DLG + +HS L + VG+ +
Sbjct: 134 IAHRDLKSKNILVKKNGQC-----CIADLGLAV-----MHSQSTNQLDVGNNPRVGTKRY 183
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVY----------ILLCGYPPFY 224
MAPE+++ + + KR D+W+ G+V++ I+ PPFY
Sbjct: 184 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 234
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMAGF-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 247 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
+ +
Sbjct: 307 YFA 309
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 19/100 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP N L V+ D +K+ DF L + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMAGF-----------VATRWYRAP 191
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 77/196 (39%), Gaps = 47/196 (23%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSA 308
GI HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 151 GIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVR-------------VASR 195
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHA 368
F PE++ + YD D+WSLG ++ ++ PF+ G D Q
Sbjct: 196 YFKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFFH--GHDNYDQLVRIAKV 248
Query: 369 C-QEILFHSIQQGHYDF-----------PEGEWST---------ISDEAKDLIRRLLVKD 407
E L+ I + + + W +S EA D + +LL D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 408 ARKRLSAASVLKHPWI 423
+ RL+A ++HP+
Sbjct: 309 HQSRLTAREAMEHPYF 324
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 45/102 (44%), Gaps = 24/102 (23%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS----GIKFNTSVHSPLATPLLLTPVGSAE 182
I HRD+KP N++ H + ++L D+ L G ++N V S
Sbjct: 152 IMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQEYNVRV-------------ASRY 196
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
F PE++ + YD D+WSLG ++ ++ PF+
Sbjct: 197 FKGPELLVDY-----QMYDYSLDMWSLGCMLASMIFRKEPFF 233
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 81/190 (42%), Gaps = 41/190 (21%)
Query: 237 ETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK----FNTSV 292
+TC A Q + H + I HRDLK EN+L + +KLCDF + I ++ S
Sbjct: 144 QTCRAVQHM--HRQKPPIIHRDLKVENLLLSNQ---GTIKLCDFGSATTISHYPDYSWSA 198
Query: 293 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGY--DKRCDLWSLGVVVYILLCGYPPF 350
+T + + PEI++ + S + ++ D+W+LG ++Y+L PF
Sbjct: 199 QRRALVEEEITRNTTPMYRTPEIIDLY-----SNFPIGEKQDIWALGCILYLLCFRQHPF 253
Query: 351 YGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFP--EGEWSTISDEAKDLIRRLLVKDA 408
ED R I G Y P + +++ LIR +L +
Sbjct: 254 -----EDGAKLR--------------IVNGKYSIPPHDTQYTVF----HSLIRAMLQVNP 290
Query: 409 RKRLSAASVL 418
+RLS A V+
Sbjct: 291 EERLSIAEVV 300
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/274 (21%), Positives = 102/274 (37%), Gaps = 73/274 (26%)
Query: 55 ILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQ---- 110
+L +G +A V ++ + EYA+K + + +EV GHPNI+Q
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 111 -------------------------LLEYYEDDEN-----------------------HE 122
L+E+ + E+ H
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR 154
Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK----FNTSVHSPLATPLLLTPV 178
+ I HRDLK EN+L + +KLCDF + I ++ S +T
Sbjct: 155 QKPPIIHRDLKVENLLLSNQ---GTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRN 211
Query: 179 GSAEFMAPEIVNAFMGPEASGY--DKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 236
+ + PEI++ + S + ++ D+W+LG ++Y+L PF G G
Sbjct: 212 TTPMYRTPEIIDLY-----SNFPIGEKQDIWALGCILYLLCFRQHPF--EDGAKLRIVNG 264
Query: 237 ETC---HACQEILFHSIQQGIAHRDLKPENILCV 267
+ H Q +FHS+ + + + PE L +
Sbjct: 265 KYSIPPHDTQYTVFHSLIRAMLQ--VNPEERLSI 296
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + V + + AP
Sbjct: 142 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMAGF-----------VATRWYRAP 187
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 188 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 242
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 243 LKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 302
Query: 422 WIS 424
+ +
Sbjct: 303 YFA 305
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 19/100 (19%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKP N L V+ D +K+ DF L + V + + AP
Sbjct: 142 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMAGF-----------VATRWYRAP 187
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
EI+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 188 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 222
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 79/209 (37%), Gaps = 42/209 (20%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNT 290
WQ + C E I HRDLKP+N+L QL KL DF L GI NT
Sbjct: 115 WQLLQGLAFCHE-------NKILHRDLKPQNLLINKRGQL---KLGDFGLARAFGIPVNT 164
Query: 291 SVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
+ V + + AP+++ MG + Y D+WS G ++ ++ G P F
Sbjct: 165 ----------FSSEVVTLWYRAPDVL---MG--SRTYSTSIDIWSCGCILAEMITGKPLF 209
Query: 351 YGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISD---------------E 395
G E+ + E L+ S+ + P + D
Sbjct: 210 PGTNDEEQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGN 269
Query: 396 AKDLIRRLLVKDARKRLSAASVLKHPWIS 424
D + LL + RLSA L HPW +
Sbjct: 270 LMDFLHGLLQLNPDMRLSAKQALHHPWFA 298
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 51/107 (47%), Gaps = 20/107 (18%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEF 183
+I HRDLKP+N+L QL KL DF L GI NT + V + +
Sbjct: 128 KILHRDLKPQNLLINKRGQL---KLGDFGLARAFGIPVNT----------FSSEVVTLWY 174
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
AP+++ MG + Y D+WS G ++ ++ G P F G E+
Sbjct: 175 RAPDVL---MG--SRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEE 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 56/126 (44%), Gaps = 23/126 (18%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
H EI + IAHRDLK +NIL Q C DLG + +HS
Sbjct: 148 AHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQC-----CIADLGLAV-----MHSQSTN 197
Query: 299 PLLLTP---VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY----------ILLC 345
L + VG+ +MAPE+++ + + KR D+W+ G+V++ I+
Sbjct: 198 QLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVED 257
Query: 346 GYPPFY 351
PPFY
Sbjct: 258 YKPPFY 263
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 23/111 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP---VGSAEF 183
IAHRDLK +NIL Q C DLG + +HS L + VG+ +
Sbjct: 163 IAHRDLKSKNILVKKNGQC-----CIADLGLAV-----MHSQSTNQLDVGNNPRVGTKRY 212
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVY----------ILLCGYPPFY 224
MAPE+++ + + KR D+W+ G+V++ I+ PPFY
Sbjct: 213 MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY 263
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+CDF L + H T L V + + A
Sbjct: 142 NVLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 193
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-CGWQRGETCHACQE 371
PEI+ + GY K D+WS+G ++ +L P F G D G QE
Sbjct: 194 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQE 248
Query: 372 IL--FHSIQQGHY--DFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
L +++ +Y P W+ + +A DL+ ++L + KR+ L H
Sbjct: 249 DLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 308
Query: 421 PWIS 424
P++
Sbjct: 309 PYLE 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+CDF L + H T L V + + AP
Sbjct: 143 VLHRDLKPSNLLL---NTTCDLKICDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 194
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 195 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 228
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 78/184 (42%), Gaps = 33/184 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFD-LGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
I HRDLKP N L V+ D C+ LG G+ +T + V + + A
Sbjct: 146 IIHRDLKPSN-LAVNED-------CELKILGFGLARHTDDE-------MTGYVATRWYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGE 364
PEI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 191 PEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 421 PWIS 424
+ +
Sbjct: 306 AYFA 309
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 81/219 (36%), Gaps = 70/219 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 87
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFD-LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
HRDLKP N L V+ D C+ LG G+ +T + V + + APE
Sbjct: 148 HRDLKPSN-LAVNED-------CELKILGFGLARHTDDE-------MTGYVATRWYRAPE 192
Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
I+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 193 IMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
E+H+ I HRD+KP NIL + +KLCDF V L + + VG+
Sbjct: 131 REKHQ-IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGT 176
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+MAPE + + + Y + D+WS+G+ + L G P
Sbjct: 177 RSYMAPERL------QGTHYSVQSDIWSMGLSLVELAVGRYPI 213
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRD+KP NIL + +KLCDF V L + + VG+ +MAP
Sbjct: 136 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMAP 182
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
E + + + Y + D+WS+G+ + L G P
Sbjct: 183 ERL------QGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 75/183 (40%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ DF L + + V + + AP
Sbjct: 175 IIHRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAP 220
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG----NCGEDCGWQRGE-TCHA 368
EI+ +M Y+ D+WS+G ++ LL G F G N + G
Sbjct: 221 EIMLNWMH-----YNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTPPASV 275
Query: 369 CQEILFHSIQQGHYDFPEGEWSTISDE-------AKDLIRRLLVKDARKRLSAASVLKHP 421
+ H + P+ +D A DL+ ++LV D KR++A+ L HP
Sbjct: 276 ISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRITASEALAHP 335
Query: 422 WIS 424
+ S
Sbjct: 336 YFS 338
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 83/218 (38%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + ++ + L+ AVK + + P S R ++E+ H + H N+I LL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 116
Query: 113 EYYE--------------------------------DDE------------NHERHKRIA 128
+ + DD + I
Sbjct: 117 DVFTPATSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 176
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ DF L + + V + + APEI
Sbjct: 177 HRDLKPSN-LAVNED--CELKILDFGLARHTDDEMTGY-----------VATRWYRAPEI 222
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y+ D+WS+G ++ LL G F G
Sbjct: 223 MLNWMH-----YNMTVDIWSVGCIMAELLTGRTLFPGT 255
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 84/212 (39%), Gaps = 35/212 (16%)
Query: 233 WQRGETCHACQEILFHSIQ-------QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG 285
+QRG H + I + ++Q HRD+KPENIL + S +KLCDF
Sbjct: 95 YQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT---KHSVIKLCDFGFARL 151
Query: 286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
+ + + V + + +PE++ + Y D+W++G V LL
Sbjct: 152 LTGPSDYYD--------DEVATRWYRSPELLVG-----DTQYGPPVDVWAIGCVFAELLS 198
Query: 346 GYPPFYGNCGEDCGW----QRGETCHACQEILFHSIQQGHYDFPEGE--------WSTIS 393
G P + G D + G+ Q++ + P+ E + IS
Sbjct: 199 GVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNIS 258
Query: 394 DEAKDLIRRLLVKDARKRLSAASVLKHPWIST 425
A L++ L D +RL+ +L HP+
Sbjct: 259 YPALGLLKGCLHMDPTERLTCEQLLHHPYFEN 290
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRD+KPENIL + S +KLCDF + + + V + + +PE+
Sbjct: 125 HRDVKPENILIT---KHSVIKLCDFGFARLLTGPSDYYD--------DEVATRWYRSPEL 173
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
+ + Y D+W++G V LL G P + G D
Sbjct: 174 LVG-----DTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVD 210
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 89/217 (41%), Gaps = 42/217 (19%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
L H + I HRD+K +NI V+L DF + + N++V A +
Sbjct: 138 LKHVHDRKILHRDIKSQNIFLTKD---GTVQLGDFGIARVL--NSTVELARAC------I 186
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
G+ +++PEI E Y+ + D+W+LG V+Y L C ++ G
Sbjct: 187 GTPYYLSPEIC------ENKPYNNKSDIWALGCVLYEL----------CTLKHAFEAGSM 230
Query: 366 CHACQEILFHSI--QQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
+ +I+ S HY + + + L+ +L ++ R R S S+L+ +I
Sbjct: 231 KNLVLKIISGSFPPVSLHYSY----------DLRSLVSQLFKRNPRDRPSVNSILEKGFI 280
Query: 424 STAGTAHRPLVTPQVIRRNQSARELSSFAESAMSANR 460
+ ++PQ+I + S F + A R
Sbjct: 281 A---KRIEKFLSPQLIAEEFCLKTFSKFGSQPIPAKR 314
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 87/217 (40%), Gaps = 63/217 (29%)
Query: 45 FQDLYR-LKGEILGKGAYASVQTCVNILTELEYAVKIID--KLPGHSRSRVFKEVETFHH 101
FQ + + ++ + +G+G++ + +Y +K I+ ++ R +EV +
Sbjct: 20 FQSMEKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLAN 79
Query: 102 CQGHPNIIQLLEYYEDDEN----------------------------------------- 120
+ HPNI+Q E +E++ +
Sbjct: 80 MK-HPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL 138
Query: 121 -HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 179
H ++I HRD+K +NI V+L DF + + N++V A +G
Sbjct: 139 KHVHDRKILHRDIKSQNIFLTKD---GTVQLGDFGIARVL--NSTVELARAC------IG 187
Query: 180 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYIL 216
+ +++PEI E Y+ + D+W+LG V+Y L
Sbjct: 188 TPYYLSPEIC------ENKPYNNKSDIWALGCVLYEL 218
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
E+HK I HRD+KP NIL + +KLCDF V L + + VG+
Sbjct: 148 REKHK-IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGT 193
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+M+PE + + + Y + D+WS+G+ + + G P
Sbjct: 194 RSYMSPERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRD+KP NIL + +KLCDF V L + + VG+ +M+P
Sbjct: 153 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMSP 199
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
E + + + Y + D+WS+G+ + + G P
Sbjct: 200 ERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
E+HK I HRD+KP NIL + +KLCDF V L + + VG+
Sbjct: 183 REKHK-IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGT 228
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+M+PE + + + Y + D+WS+G+ + + G P
Sbjct: 229 RSYMSPERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRD+KP NIL + +KLCDF V L + + VG+ +M+P
Sbjct: 188 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMSP 234
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
E + + + Y + D+WS+G+ + + G P
Sbjct: 235 ERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
E+HK I HRD+KP NIL + +KLCDF V L + + VG+
Sbjct: 121 REKHK-IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGT 166
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+M+PE + + + Y + D+WS+G+ + + G P
Sbjct: 167 RSYMSPERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRD+KP NIL + +KLCDF V L + + VG+ +M+P
Sbjct: 126 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMSP 172
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
E + + + Y + D+WS+G+ + + G P
Sbjct: 173 ERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
E+HK I HRD+KP NIL + +KLCDF V L + + VG+
Sbjct: 121 REKHK-IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGT 166
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+M+PE + + + Y + D+WS+G+ + + G P
Sbjct: 167 RSYMSPERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRD+KP NIL + +KLCDF V L + + VG+ +M+P
Sbjct: 126 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMSP 172
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
E + + + Y + D+WS+G+ + + G P
Sbjct: 173 ERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 18/108 (16%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
H R+ I HR+LK N+L D+ VK+CDF L S +K +T + S A G+
Sbjct: 154 HNRNPPIVHRNLKSPNLLV---DKKYTVKVCDFGL-SRLKASTFLSSKSAA-------GT 202
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
E+MAPE++ E S +++ D++S GV+++ L P +GN
Sbjct: 203 PEWMAPEVLRD----EPS--NEKSDVYSFGVILWELATLQQP-WGNLN 243
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
E+HK I HRD+KP NIL + +KLCDF V L + + VG+
Sbjct: 121 REKHK-IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGT 166
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+M+PE + + + Y + D+WS+G+ + + G P
Sbjct: 167 RSYMSPERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRD+KP NIL + +KLCDF V L + + VG+ +M+P
Sbjct: 126 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMSP 172
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
E + + + Y + D+WS+G+ + + G P
Sbjct: 173 ERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 20/103 (19%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
E+HK I HRD+KP NIL + +KLCDF V L + + VG+
Sbjct: 121 REKHK-IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGT 166
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+M+PE + + + Y + D+WS+G+ + + G P
Sbjct: 167 RSYMSPERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 45/97 (46%), Gaps = 19/97 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRD+KP NIL + +KLCDF V L + + VG+ +M+P
Sbjct: 126 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDSMANSFVGTRSYMSP 172
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
E + + + Y + D+WS+G+ + + G P
Sbjct: 173 ERL------QGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
H R+ I HRDLK N+L D+ VK+CDF L S +K + + S A G+
Sbjct: 154 HNRNPPIVHRDLKSPNLLV---DKKYTVKVCDFGL-SRLKASXFLXSKXAA-------GT 202
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 228
E+MAPE++ E S +++ D++S GV+++ L P +GN
Sbjct: 203 PEWMAPEVLRD----EPS--NEKSDVYSFGVILWELATLQQP-WGNLN 243
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 56/109 (51%), Gaps = 18/109 (16%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
H+ I HRDLK N+L D+ VK+CDF L S +K + + S A G
Sbjct: 153 LHNRNPPIVHRDLKSPNLLV---DKKYTVKVCDFGL-SRLKASXFLXSKXAA-------G 201
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
+ E+MAPE++ E S +++ D++S GV+++ L P +GN
Sbjct: 202 TPEWMAPEVLRD----EPS--NEKSDVYSFGVILWELATLQQP-WGNLN 243
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 73/184 (39%), Gaps = 25/184 (13%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+L + +K+ DF L + H T L V + + A
Sbjct: 144 NVLHRDLKPSNLLL---NTTXDLKIXDFGLA---RVADPDHD--HTGFLTEYVATRWYRA 195
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED-----CGWQRGETCH 367
PEI+ + GY K D+WS+G ++ +L P F G D G +
Sbjct: 196 PEIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250
Query: 368 ACQEILFHSIQQGHYDFPEGE---WSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
I+ + P W+ + +A DL+ ++L + KR+ L H
Sbjct: 251 DLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAH 310
Query: 421 PWIS 424
P++
Sbjct: 311 PYLE 314
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 46/99 (46%), Gaps = 13/99 (13%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+L + +K+ DF L + H T L V + + AP
Sbjct: 145 VLHRDLKPSNLLL---NTTXDLKIXDFGLA---RVADPDHD--HTGFLTEYVATRWYRAP 196
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
EI+ + GY K D+WS+G ++ +L P F G
Sbjct: 197 EIM-----LNSKGYTKSIDIWSVGCILAEMLSNRPIFPG 230
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 71/173 (41%), Gaps = 36/173 (20%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRD+KP NIL + +KLCDF V L + VG+ +M+P
Sbjct: 129 IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDEMANEFVGTRSYMSP 175
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEIL 373
E + + + Y + D+WS+G+ + + G P A E+L
Sbjct: 176 ERL------QGTHYSVQSDIWSMGLSLVEMAVGRYP--------------RPPMAIFELL 215
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWISTA 426
+ + + P +S E +D + + L+K+ +R ++ H +I +
Sbjct: 216 DYIVNEPPPKLPSAVFSL---EFQDFVNKCLIKNPAERADLKQLMVHAFIKRS 265
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 20/102 (19%)
Query: 121 HERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
E+HK I HRD+KP NIL + +KLCDF V L + VG+
Sbjct: 124 REKHK-IMHRDVKPSNILV---NSRGEIKLCDF----------GVSGQLIDEMANEFVGT 169
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPP 222
+M+PE + + + Y + D+WS+G+ + + G P
Sbjct: 170 RSYMSPERL------QGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 21/109 (19%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
RI H DLKPENIL + S +K+ DF GS + V+ T + S + A
Sbjct: 220 RIIHCDLKPENILLKQQGR-SGIKVIDF--GSSCYEHQRVY---------TXIQSRFYRA 267
Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 234
PE++ + Y D+WSLG ++ LL GYP GED G Q
Sbjct: 268 PEVI------LGARYGMPIDMWSLGCILAELLTGYPLL---PGEDEGDQ 307
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 21/108 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I H DLKPENIL + S +K+ DF GS + V+ T + S + AP
Sbjct: 221 IIHCDLKPENILLKQQGR-SGIKVIDF--GSSCYEHQRVY---------TXIQSRFYRAP 268
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 361
E++ + Y D+WSLG ++ LL GYP GED G Q
Sbjct: 269 EVI------LGARYGMPIDMWSLGCILAELLTGYPLL---PGEDEGDQ 307
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 52/109 (47%), Gaps = 21/109 (19%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
RI H DLKPENIL + S +K+ DF GS + V+ T + S + A
Sbjct: 220 RIIHCDLKPENILLKQQGR-SGIKVIDF--GSSCYEHQRVY---------TXIQSRFYRA 267
Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 234
PE++ + Y D+WSLG ++ LL GYP GED G Q
Sbjct: 268 PEVI------LGARYGMPIDMWSLGCILAELLTGYPLL---PGEDEGDQ 307
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 51/108 (47%), Gaps = 21/108 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I H DLKPENIL + S +K+ DF GS + V+ T + S + AP
Sbjct: 221 IIHCDLKPENILLKQQGR-SGIKVIDF--GSSCYEHQRVY---------TXIQSRFYRAP 268
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 361
E++ + Y D+WSLG ++ LL GYP GED G Q
Sbjct: 269 EVI------LGARYGMPIDMWSLGCILAELLTGYPLL---PGEDEGDQ 307
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 78/184 (42%), Gaps = 33/184 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFD-LGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
I HRDLKP N L V+ D C+ L +G+ +T + V + + A
Sbjct: 146 IIHRDLKPSN-LAVNED-------CELKILDAGLARHTDDE-------MTGYVATRWYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGE 364
PEI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 191 PEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 421 PWIS 424
+ +
Sbjct: 306 AYFA 309
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 81/219 (36%), Gaps = 70/219 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 87
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFD-LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
HRDLKP N L V+ D C+ L +G+ +T + V + + APE
Sbjct: 148 HRDLKPSN-LAVNED-------CELKILDAGLARHTDDE-------MTGYVATRWYRAPE 192
Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
I+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 193 IMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 100/261 (38%), Gaps = 67/261 (25%)
Query: 205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILF-HSIQQGIAHRDLKPEN 263
+L L +I G+ PF + +Q C+ + F HS + H DLKPEN
Sbjct: 97 ELLGLSTYDFIKENGFLPFRLDHIRKMAYQ------ICKSVNFLHS--NKLTHTDLKPEN 148
Query: 264 ILCVHPDQ---------------LSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
IL V D ++P +K+ DF GS ++ HS L V +
Sbjct: 149 ILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF--GSAT-YDDEHHSTL--------VST 197
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF-YGNCGEDCGWQRGETC 366
+ APE++ A G+ + CD+WS+G ++ G+ F + E
Sbjct: 198 RHYRAPEVILAL------GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILG 251
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAK------------------------DLIRR 402
+ ++ + ++ ++ +W S + DLI++
Sbjct: 252 PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQK 311
Query: 403 LLVKDARKRLSAASVLKHPWI 423
+L D KR++ LKHP+
Sbjct: 312 MLEYDPAKRITLREALKHPFF 332
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 33/114 (28%)
Query: 126 RIAHRDLKPENILCVHPDQ---------------LSP-VKLCDFDLGSGIKFNTSVHSPL 169
++ H DLKPENIL V D ++P +K+ DF GS ++ HS L
Sbjct: 138 KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF--GSAT-YDDEHHSTL 194
Query: 170 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
V + + APE++ A G+ + CD+WS+G ++ G+ F
Sbjct: 195 --------VSTRHYRAPEVILAL------GWSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K I HRDLK NI +H D + VK+ DF L + + H GS +M
Sbjct: 139 KSIIHRDLKSNNIF-LHED--NTVKIGDFGLATEKSRWSGSHQ------FEQLSGSILWM 189
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ +++ Y + D+++ G+V+Y L+ G P+
Sbjct: 190 APEVIRM---QDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ I HRDLK NI +H D + VK+ DF L + + H GS +M
Sbjct: 139 KSIIHRDLKSNNIF-LHED--NTVKIGDFGLATEKSRWSGSHQ------FEQLSGSILWM 189
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
APE++ +++ Y + D+++ G+V+Y L+ G P+
Sbjct: 190 APEVIRM---QDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 45/107 (42%), Gaps = 12/107 (11%)
Query: 120 NHERHKRIAHRDLKPENIL-CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
NH R I HR++KP NI+ + D S KL DF ++ + ++
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---------FVSLY 176
Query: 179 GSAEFMAPEIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
G+ E++ P++ Y DLWS+GV Y G PF
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 12/106 (11%)
Query: 248 HSIQQGIAHRDLKPENIL-CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
H + GI HR++KP NI+ + D S KL DF ++ + ++ G
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---------FVSLYG 177
Query: 307 SAEFMAPEIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
+ E++ P++ Y DLWS+GV Y G PF
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K I HRDLK NI +H D + VK+ DF L + + H GS +M
Sbjct: 139 KSIIHRDLKSNNIF-LHED--NTVKIGDFGLATEKSRWSGSHQ------FEQLSGSILWM 189
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ +++ Y + D+++ G+V+Y L+ G P+
Sbjct: 190 APEVIRM---QDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ I HRDLK NI +H D + VK+ DF L + + H GS +M
Sbjct: 139 KSIIHRDLKSNNIF-LHED--NTVKIGDFGLATEKSRWSGSHQ------FEQLSGSILWM 189
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
APE++ +++ Y + D+++ G+V+Y L+ G P+
Sbjct: 190 APEVIRM---QDSNPYSFQSDVYAFGIVLYELMTGQLPY 225
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 51/100 (51%), Gaps = 13/100 (13%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLA-TPLLLT---PVGS 307
+G+ HRDLKP NI D VK+ DF L + + + + L P T VG+
Sbjct: 183 KGLMHRDLKPSNIFFTMDDV---VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGT 239
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+M+PE ++ + Y + D++SLG++++ LL +
Sbjct: 240 KLYMSPEQIH------GNNYSHKVDIFSLGLILFELLYSF 273
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 13/100 (13%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLA-TPLLLT---PVGS 180
K + HRDLKP NI D VK+ DF L + + + + L P T VG+
Sbjct: 183 KGLMHRDLKPSNIFFTMDDV---VKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGT 239
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY 220
+M+PE ++ + Y + D++SLG++++ LL +
Sbjct: 240 KLYMSPEQIH------GNNYSHKVDIFSLGLILFELLYSF 273
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 228 GEDCGWQRGETCHACQEILFHSI-QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI 286
G R C +LF + + I H DLKPENIL +P + S +K+ DF GS
Sbjct: 153 GVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKR-SAIKIVDF--GSSC 209
Query: 287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG 346
+ ++ + + + +PE++ YD D+WSLG ++ + G
Sbjct: 210 QLGQRIYQXIQSRF---------YRSPEVLLGM------PYDLAIDMWSLGCILVEMHTG 254
Query: 347 YPPFYG 352
P F G
Sbjct: 255 EPLFSG 260
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 18/99 (18%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I H DLKPENIL +P + S +K+ DF GS + ++ + + + +P
Sbjct: 180 IIHCDLKPENILLCNPKR-SAIKIVDF--GSSCQLGQRIYQXIQSRF---------YRSP 227
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
E++ YD D+WSLG ++ + G P F G
Sbjct: 228 EVLLGM------PYDLAIDMWSLGCILVEMHTGEPLFSG 260
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 76/183 (41%), Gaps = 31/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKP N L V+ D +K+ D L + + V + + AP
Sbjct: 146 IIHRDLKPSN-LAVNED--CELKILDRGLARHTDDEMTGY-----------VATRWYRAP 191
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGET 365
EI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 192 EIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 246
Query: 366 CHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 247 LKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHA 306
Query: 422 WIS 424
+ +
Sbjct: 307 YFA 309
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 52/218 (23%), Positives = 79/218 (36%), Gaps = 68/218 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 87
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDLKP N L V+ D +K+ D L + + V + + APEI
Sbjct: 148 HRDLKPSN-LAVNED--CELKILDRGLARHTDDEMTGY-----------VATRWYRAPEI 193
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 194 MLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 228 GEDCGWQRGETCHACQEILFHSI-QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI 286
G R C +LF + + I H DLKPENIL +P + S +K+ DF GS
Sbjct: 134 GVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKR-SAIKIVDF--GSSC 190
Query: 287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG 346
+ ++ + + + +PE++ YD D+WSLG ++ + G
Sbjct: 191 QLGQRIYQXIQSRF---------YRSPEVLLGM------PYDLAIDMWSLGCILVEMHTG 235
Query: 347 YPPFYG 352
P F G
Sbjct: 236 EPLFSG 241
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 18/99 (18%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I H DLKPENIL +P + S +K+ DF GS + ++ + + + +P
Sbjct: 161 IIHCDLKPENILLCNPKR-SAIKIVDF--GSSCQLGQRIYQXIQSRF---------YRSP 208
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
E++ YD D+WSLG ++ + G P F G
Sbjct: 209 EVLLGM------PYDLAIDMWSLGCILVEMHTGEPLFSG 241
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K I HRDLK NI +H D + VK+ DF L + + H GS +M
Sbjct: 127 KSIIHRDLKSNNIF-LHED--NTVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 177
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ +++ Y + D+++ G+V+Y L+ G P+
Sbjct: 178 APEVIRM---QDSNPYSFQSDVYAFGIVLYELMTGQLPY 213
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ I HRDLK NI +H D + VK+ DF L + + H GS +M
Sbjct: 127 KSIIHRDLKSNNIF-LHED--NTVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 177
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
APE++ +++ Y + D+++ G+V+Y L+ G P+
Sbjct: 178 APEVIRM---QDSNPYSFQSDVYAFGIVLYELMTGQLPY 213
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 58/120 (48%), Gaps = 21/120 (17%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE-- 309
+G AHRDLKP NIL D+ PV + DLGS +H + L +A+
Sbjct: 153 KGYAHRDLKPTNILL--GDEGQPVLM---DLGS--MNQACIHVEGSRQALTLQDWAAQRC 205
Query: 310 ---FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
+ APE+ F D+R D+WSLG V+Y ++ G P+ D +Q+G++
Sbjct: 206 TISYRAPEL---FSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY------DMVFQKGDSV 256
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 57/120 (47%), Gaps = 21/120 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE-- 182
K AHRDLKP NIL D+ PV + DLGS +H + L +A+
Sbjct: 153 KGYAHRDLKPTNILL--GDEGQPVLM---DLGS--MNQACIHVEGSRQALTLQDWAAQRC 205
Query: 183 ---FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 239
+ APE+ F D+R D+WSLG V+Y ++ G P+ D +Q+G++
Sbjct: 206 TISYRAPEL---FSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY------DMVFQKGDSV 256
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 28/121 (23%)
Query: 102 CQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIK 160
QG N I L HE H HRD+K NIL D+ K+ DF L + K
Sbjct: 139 AQGAANGINFL--------HENHH--IHRDIKSANILL---DEAFTAKISDFGLARASEK 185
Query: 161 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY 220
F +V + VG+ +MAPE + + P + D++S GVV+ ++ G
Sbjct: 186 FAQTV-------MXXRIVGTTAYMAPEALRGEITP-------KSDIYSFGVVLLEIITGL 231
Query: 221 P 221
P
Sbjct: 232 P 232
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 18/94 (19%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 314
HRD+K NIL D+ K+ DF L + KF +V + VG+ +MAPE
Sbjct: 156 HRDIKSANILL---DEAFTAKISDFGLARASEKFAQTV-------MXXRIVGTTAYMAPE 205
Query: 315 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
+ + P + D++S GVV+ ++ G P
Sbjct: 206 ALRGEITP-------KSDIYSFGVVLLEIITGLP 232
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 59/197 (29%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 117 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 162
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 163 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 207
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ +G F + +S E + LIR L
Sbjct: 208 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 242
Query: 408 ARKRLSAASVLKHPWIS 424
R + + HPW+
Sbjct: 243 PSDRPTFEEIQNHPWMQ 259
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 9 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 66
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 126
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 127 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 174
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 175 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 210
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 59/197 (29%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 164 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 209
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 210 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 254
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ +G F + +S E + LIR L
Sbjct: 255 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 289
Query: 408 ARKRLSAASVLKHPWIS 424
R + + HPW+
Sbjct: 290 PSDRPTFEEIQNHPWMQ 306
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 21/99 (21%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRD+K ENIL L+ +L D GSG +V++ G+ + P
Sbjct: 178 VLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRVYSPP 225
Query: 187 EIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
E + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 226 EWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 257
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 77/190 (40%), Gaps = 38/190 (20%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSP--------VKLCDFDLGSGIKFNTSVHSPLAT 298
HS++ I HRDLKP+NIL + + +++ D G K ++ S
Sbjct: 131 LHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTN 188
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR-CDLWSLG-VVVYILLCGYPPFYGNCGE 356
L P G++ + APE++ + R D++S+G V YIL G PF
Sbjct: 189 --LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246
Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISD-----EAKDLIRRLLVKDARKR 411
+ RG F E + D EA DLI +++ D KR
Sbjct: 247 ESNIIRGI-------------------FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKR 287
Query: 412 LSAASVLKHP 421
+A VL+HP
Sbjct: 288 PTAMKVLRHP 297
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 12/145 (8%)
Query: 102 CQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSP--------VKLCDF 153
Q N I LL H +I HRDLKP+NIL + + +++
Sbjct: 111 LQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170
Query: 154 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR-CDLWSLG-V 211
D G K ++ S L P G++ + APE++ + R D++S+G V
Sbjct: 171 DFGLCKKLDSGQSSFRTN--LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
Query: 212 VVYILLCGYPPFYGNCGEDCGWQRG 236
YIL G PF + RG
Sbjct: 229 FYYILSKGKHPFGDKYSRESNIIRG 253
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 77/184 (41%), Gaps = 33/184 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFD-LGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
I HRDLKP N L V+ D C+ L G+ +T + V + + A
Sbjct: 146 IIHRDLKPSN-LAVNED-------CELKILDGGLARHTDDE-------MTGYVATRWYRA 190
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRGE 364
PEI+ +M Y++ D+WS+G ++ LL G F G D G E
Sbjct: 191 PEIMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAE 245
Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTI----SDEAKDLIRRLLVKDARKRLSAASVLKH 420
+ Q P+ ++ + + A DL+ ++LV D+ KR++AA L H
Sbjct: 246 LLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 305
Query: 421 PWIS 424
+ +
Sbjct: 306 AYFA 309
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 80/219 (36%), Gaps = 70/219 (31%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGHS---RSRVFKEVETFHHCQGHPNIIQLL 112
+G GAY SV + T L AVK + + P S R ++E+ H + H N+I LL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSR-PFQSIIHAKRTYRELRLLKHMK-HENVIGLL 87
Query: 113 EYYEDDENHERHKR--------------------------------------------IA 128
+ + + E I
Sbjct: 88 DVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADII 147
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFD-LGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
HRDLKP N L V+ D C+ L G+ +T + V + + APE
Sbjct: 148 HRDLKPSN-LAVNED-------CELKILDGGLARHTDDE-------MTGYVATRWYRAPE 192
Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
I+ +M Y++ D+WS+G ++ LL G F G
Sbjct: 193 IMLNWMH-----YNQTVDIWSVGCIMAELLTGRTLFPGT 226
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 33/186 (17%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRD+KP N+L D +KLCDF GS K + S + + + S + A
Sbjct: 151 NVCHRDIKPHNVLVNEAD--GTLKLCDF--GSAKKLSPSEPN-------VAYICSRYYRA 199
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN--CGEDCGWQRGETCHACQ 370
PE++ Y D+WS+G + ++ G P F G+ G+ R C +
Sbjct: 200 PELIFG-----NQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC-PSR 253
Query: 371 EILFHSIQQGH-----YDFPEGEWSTI--------SDEAKDLIRRLLVKDARKRLSAASV 417
E+L + H Y+ WS + + EA DL+ LL +R+
Sbjct: 254 EVL-RKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYEA 312
Query: 418 LKHPWI 423
L HP+
Sbjct: 313 LCHPYF 318
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 47/100 (47%), Gaps = 16/100 (16%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRD+KP N+L D +KLCDF GS K + S + + + S + AP
Sbjct: 152 VCHRDIKPHNVLVNEAD--GTLKLCDF--GSAKKLSPSEPN-------VAYICSRYYRAP 200
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
E++ Y D+WS+G + ++ G P F G+
Sbjct: 201 ELIFG-----NQHYTTAVDIWSVGCIFAEMMLGEPIFRGD 235
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 121 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 166
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 167 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 211
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ +G F + +S E + LIR L
Sbjct: 212 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 246
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 247 PSDRPTFEEIQNHPWM 262
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 13 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 70
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 71 GFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 130
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 131 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 178
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 179 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 214
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 59/197 (29%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 120 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 165
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 166 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 210
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ +G F + +S E + LIR L
Sbjct: 211 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 245
Query: 408 ARKRLSAASVLKHPWIS 424
R + + HPW+
Sbjct: 246 PSDRPTFEEIQNHPWMQ 262
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 12 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 69
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 70 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 129
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 130 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 177
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 178 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 213
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 121 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 166
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 167 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 211
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ +G F + +S E + LIR L
Sbjct: 212 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 246
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 247 PSDRPTFEEIQNHPWM 262
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 13 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 70
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 71 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 130
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 131 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 178
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 179 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 214
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 164 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 209
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 210 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 254
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ +G F + +S E + LIR L
Sbjct: 255 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 289
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 290 PSDRPTFEEIQNHPWM 305
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 56 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 113
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 114 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 173
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 174 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 221
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 222 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 257
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 137 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 182
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 183 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 227
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ +G F + +S E + LIR L
Sbjct: 228 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 262
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 263 PSDRPTFEEIQNHPWM 278
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 29 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 86
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 146
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 147 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 194
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 195 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 230
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 149 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 194
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 195 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 239
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ +G F + +S E + LIR L
Sbjct: 240 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 274
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 275 PSDRPTFEEIQNHPWM 290
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 41 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 98
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 159 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 206
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 207 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 242
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 122 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 167
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 168 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 212
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ +G F + +S E + LIR L
Sbjct: 213 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 247
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 248 PSDRPTFEEIQNHPWM 263
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 14 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 71
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 131
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 132 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 179
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 180 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 215
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 136 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 181
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 182 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 226
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ +G F + +S E + LIR L
Sbjct: 227 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 261
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 262 PSDRPTFEEIQNHPWM 277
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 28 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 85
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 86 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 145
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 146 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 193
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 194 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 229
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 122 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 167
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 168 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 212
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ +G F + +S E + LIR L
Sbjct: 213 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 247
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 248 PSDRPTFEEIQNHPWM 263
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 14 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 71
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 131
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 132 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 179
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 180 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 215
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 77/194 (39%), Gaps = 53/194 (27%)
Query: 233 WQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 292
WQ E C G+ HRD+K ENIL L+ +L D GSG +V
Sbjct: 117 WQVLEAVRHCH-------NXGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTV 165
Query: 293 HSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
++ G+ + PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 166 YTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 210
Query: 351 YGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARK 410
+ +EI+ +G F + +S E + LIR L
Sbjct: 211 EHD----------------EEII-----RGQVFFRQ----RVSXECQHLIRWCLALRPSD 245
Query: 411 RLSAASVLKHPWIS 424
R + + HPW+
Sbjct: 246 RPTFEEIQNHPWMQ 259
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/223 (22%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 9 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 66
Query: 104 GHPNIIQLLEYYEDDEN-----------------------------------------HE 122
G +I+LL+++E ++ H
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 126
Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ + HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 127 HNXGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 174
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 175 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 210
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 34/125 (27%)
Query: 242 CQEILFHSIQQGIAHRDLKPENILCVHPD----------------QLSPVKLCDFDLGSG 285
CQ + F + H DLKPENIL V+ D + + V++ DF GS
Sbjct: 147 CQAVKFLH-DNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDF--GSA 203
Query: 286 IKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
F+ HS T V + + APE++ G+ + CD+WS+G +++
Sbjct: 204 T-FDHEHHS--------TIVSTRHYRAPEVILEL------GWSQPCDVWSIGCIIFEYYV 248
Query: 346 GYPPF 350
G+ F
Sbjct: 249 GFTLF 253
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 33/114 (28%)
Query: 126 RIAHRDLKPENILCVHPD----------------QLSPVKLCDFDLGSGIKFNTSVHSPL 169
++ H DLKPENIL V+ D + + V++ DF GS F+ HS
Sbjct: 157 KLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDF--GSAT-FDHEHHS-- 211
Query: 170 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
T V + + APE++ G+ + CD+WS+G +++ G+ F
Sbjct: 212 ------TIVSTRHYRAPEVILEL------GWSQPCDVWSIGCIIFEYYVGFTLF 253
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 156 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 201
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 202 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 246
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ +G F + +S E + LIR L
Sbjct: 247 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 281
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 282 PSDRPTFEEIQNHPWM 297
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 48 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 105
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 106 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 165
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 166 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 213
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 214 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 249
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 122 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 167
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 168 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 212
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ +G F + +S E + LIR L
Sbjct: 213 IPFEHD----------------EEII-----RGQVFFRQ----RVSSECQHLIRWCLALR 247
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 248 PSDRPTFEEIQNHPWM 263
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 14 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 71
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 72 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 131
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 132 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 179
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 180 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 215
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
CH EI + IAHRDLK +NIL C DLG +KF + +
Sbjct: 148 CHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGT-----CCIADLGLAVKFISDTNEVDIP 202
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
P T VG+ +M PE+++ + D++S G++++
Sbjct: 203 P--NTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILW 243
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 7/88 (7%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
IAHRDLK +NIL C DLG +KF + + P T VG+ +M P
Sbjct: 163 IAHRDLKSKNILVKKNGT-----CCIADLGLAVKFISDTNEVDIPP--NTRVGTKRYMPP 215
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVY 214
E+++ + D++S G++++
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILW 243
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 18/104 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKPENIL VKL DF L + ++ TP+++T + AP
Sbjct: 141 IVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMAL-----TPVVVT----LWYRAP 188
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ S Y D+WS+G + + P F GN D
Sbjct: 189 EVL------LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 226
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 47/104 (45%), Gaps = 18/104 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKPENIL VKL DF L + ++ TP+++T + AP
Sbjct: 141 IVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMAL-----TPVVVT----LWYRAP 188
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
E++ S Y D+WS+G + + P F GN D
Sbjct: 189 EVL------LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 226
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 53/121 (43%), Gaps = 28/121 (23%)
Query: 102 CQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIK 160
QG N I L HE H HRD+K NIL D+ K+ DF L + K
Sbjct: 139 AQGAANGINFL--------HENHH--IHRDIKSANILL---DEAFTAKISDFGLARASEK 185
Query: 161 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY 220
F +V + VG+ +MAPE + + P + D++S GVV+ ++ G
Sbjct: 186 FAQTV-------MXSRIVGTTAYMAPEALRGEITP-------KSDIYSFGVVLLEIITGL 231
Query: 221 P 221
P
Sbjct: 232 P 232
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 18/94 (19%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 314
HRD+K NIL D+ K+ DF L + KF +V + VG+ +MAPE
Sbjct: 156 HRDIKSANILL---DEAFTAKISDFGLARASEKFAQTV-------MXSRIVGTTAYMAPE 205
Query: 315 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
+ + P + D++S GVV+ ++ G P
Sbjct: 206 ALRGEITP-------KSDIYSFGVVLLEIITGLP 232
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 44/107 (41%), Gaps = 12/107 (11%)
Query: 120 NHERHKRIAHRDLKPENIL-CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
NH R I HR++KP NI+ + D S KL DF ++ + +
Sbjct: 126 NHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---------FVXLY 176
Query: 179 GSAEFMAPEIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
G+ E++ P++ Y DLWS+GV Y G PF
Sbjct: 177 GTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 12/106 (11%)
Query: 248 HSIQQGIAHRDLKPENIL-CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
H + GI HR++KP NI+ + D S KL DF ++ + + G
Sbjct: 127 HLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ---------FVXLYG 177
Query: 307 SAEFMAPEIVN--AFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
+ E++ P++ Y DLWS+GV Y G PF
Sbjct: 178 TEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPF 223
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 137 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 182
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 183 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 227
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ +G F + +S E + LIR L
Sbjct: 228 IPFEHD----------------EEII-----RGQVFFRQ----RVSXECQHLIRWCLALR 262
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 263 PSDRPTFEEIQNHPWM 278
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 29 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 86
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 146
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 147 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 194
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 195 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 230
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 169 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 214
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 215 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 259
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ +G F + +S E + LIR L
Sbjct: 260 IPFEHD----------------EEII-----RGQVFFRQ----RVSXECQHLIRWCLALR 294
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 295 PSDRPTFEEIQNHPWM 310
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 61 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 118
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 119 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 178
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 179 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 226
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 227 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 262
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 59/197 (29%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 144 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 189
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 190 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 234
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ +G F + +S E + LIR L
Sbjct: 235 IPFEHD----------------EEII-----RGQVFFRQ----RVSXECQHLIRWCLALR 269
Query: 408 ARKRLSAASVLKHPWIS 424
R + + HPW+
Sbjct: 270 PSDRPTFEEIQNHPWMQ 286
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 36 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 93
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 94 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 153
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 154 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 201
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 202 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 237
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 136 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 181
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 182 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 226
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ +G F + +S E + LIR L
Sbjct: 227 IPFEHD----------------EEII-----RGQVFFRQ----RVSXECQHLIRWCLALR 261
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 262 PSDRPTFEEIQNHPWM 277
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 28 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 85
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 86 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 145
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 146 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 193
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 194 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 229
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 79/197 (40%), Gaps = 59/197 (29%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 137 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 182
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 183 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 227
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ +G F + +S E + LIR L
Sbjct: 228 IPFEHD----------------EEII-----RGQVFFRQ----RVSXECQHLIRWCLALR 262
Query: 408 ARKRLSAASVLKHPWIS 424
R + + HPW+
Sbjct: 263 PXDRPTFEEIQNHPWMQ 279
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 29 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 86
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 87 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 146
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 147 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 194
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 195 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 230
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 99/261 (37%), Gaps = 67/261 (25%)
Query: 205 DLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILF-HSIQQGIAHRDLKPEN 263
+L L +I G+ PF + +Q C+ + F HS + H DLKPEN
Sbjct: 97 ELLGLSTYDFIKENGFLPFRLDHIRKMAYQ------ICKSVNFLHS--NKLTHTDLKPEN 148
Query: 264 ILCVHPDQ---------------LSP-VKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 307
IL V D ++P +K+ DF GS ++ HS L V
Sbjct: 149 ILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF--GSAT-YDDEHHSTL--------VXX 197
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF-YGNCGEDCGWQRGETC 366
+ APE++ A G+ + CD+WS+G ++ G+ F + E
Sbjct: 198 RHYRAPEVILAL------GWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILG 251
Query: 367 HACQEILFHSIQQGHYDFPEGEWSTISDEAK------------------------DLIRR 402
+ ++ + ++ ++ +W S + DLI++
Sbjct: 252 PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQK 311
Query: 403 LLVKDARKRLSAASVLKHPWI 423
+L D KR++ LKHP+
Sbjct: 312 MLEYDPAKRITLREALKHPFF 332
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 33/114 (28%)
Query: 126 RIAHRDLKPENILCVHPDQ---------------LSP-VKLCDFDLGSGIKFNTSVHSPL 169
++ H DLKPENIL V D ++P +K+ DF GS ++ HS L
Sbjct: 138 KLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDF--GSAT-YDDEHHSTL 194
Query: 170 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
V + APE++ A G+ + CD+WS+G ++ G+ F
Sbjct: 195 --------VXXRHYRAPEVILAL------GWSQPCDVWSIGCILIEYYLGFTVF 234
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 164 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 209
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 210 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 254
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ +G F + +S E + LIR L
Sbjct: 255 IPFEHD----------------EEII-----RGQVFFRQ----RVSXECQHLIRWCLALR 289
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 290 PSDRPTFEEIQNHPWM 305
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 56 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 113
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 114 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 173
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 174 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 221
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 222 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 257
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
H EI+ + IAHRDLK +NIL C DLG ++ +++ +
Sbjct: 115 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC-----CIADLGLAVRHDSATDTIDIA 169
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
P VG+ +MAPE+++ + + KR D++++G+V +
Sbjct: 170 PN--HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 210
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
IAHRDLK +NIL C DLG ++ +++ + P VG+ +MAP
Sbjct: 130 IAHRDLKSKNILVKKNGTC-----CIADLGLAVRHDSATDTIDIAPN--HRVGTKRYMAP 182
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVY 214
E+++ + + KR D++++G+V +
Sbjct: 183 EVLDDSINMKHFESFKRADIYAMGLVFW 210
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
H EI+ + IAHRDLK +NIL C DLG ++ +++ +
Sbjct: 140 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC-----CIADLGLAVRHDSATDTIDIA 194
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
P VG+ +MAPE+++ + + KR D++++G+V +
Sbjct: 195 PN--HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 235
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
IAHRDLK +NIL C DLG ++ +++ + P VG+ +MAP
Sbjct: 155 IAHRDLKSKNILVKKNGTC-----CIADLGLAVRHDSATDTIDIAPN--HRVGTKRYMAP 207
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVY 214
E+++ + + KR D++++G+V +
Sbjct: 208 EVLDDSINMKHFESFKRADIYAMGLVFW 235
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
H EI+ + IAHRDLK +NIL C DLG ++ +++ +
Sbjct: 117 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC-----CIADLGLAVRHDSATDTIDIA 171
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
P VG+ +MAPE+++ + + KR D++++G+V +
Sbjct: 172 PN--HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 212
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
IAHRDLK +NIL C DLG ++ +++ + P VG+ +MAP
Sbjct: 132 IAHRDLKSKNILVKKNGTC-----CIADLGLAVRHDSATDTIDIAPN--HRVGTKRYMAP 184
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVY 214
E+++ + + KR D++++G+V +
Sbjct: 185 EVLDDSINMKHFESFKRADIYAMGLVFW 212
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 48/101 (47%), Gaps = 7/101 (6%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K HRD+KP+N L + + V + DF L + +TS H + G+A +
Sbjct: 122 KSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR-DTSTHQHIPYRENKNLTGTARYA 180
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
+ VN +G E S +R DL SLG V+ L G P+ G
Sbjct: 181 S---VNTHLGIEQS---RRDDLESLGYVLMYFLRGSLPWQG 215
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 47/97 (48%), Gaps = 7/97 (7%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
HRD+KP+N L + + V + DF L + +TS H + G+A + +
Sbjct: 126 HRDIKPDNFLMGLGRRANQVYIIDFGLAKKYR-DTSTHQHIPYRENKNLTGTARYAS--- 181
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
VN +G E S +R DL SLG V+ L G P+ G
Sbjct: 182 VNTHLGIEQS---RRDDLESLGYVLMYFLRGSLPWQG 215
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
H EI+ + IAHRDLK +NIL C DLG ++ +++ +
Sbjct: 120 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC-----CIADLGLAVRHDSATDTIDIA 174
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
P VG+ +MAPE+++ + + KR D++++G+V +
Sbjct: 175 PN--HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 215
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
IAHRDLK +NIL C DLG ++ +++ + P VG+ +MAP
Sbjct: 135 IAHRDLKSKNILVKKNGTC-----CIADLGLAVRHDSATDTIDIAPN--HRVGTKRYMAP 187
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVY 214
E+++ + + KR D++++G+V +
Sbjct: 188 EVLDDSINMKHFESFKRADIYAMGLVFW 215
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
H EI+ + IAHRDLK +NIL C DLG ++ +++ +
Sbjct: 153 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC-----CIADLGLAVRHDSATDTIDIA 207
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
P VG+ +MAPE+++ + + KR D++++G+V +
Sbjct: 208 PN--HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 248
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
IAHRDLK +NIL C DLG ++ +++ + P VG+ +MAP
Sbjct: 168 IAHRDLKSKNILVKKNGTC-----CIADLGLAVRHDSATDTIDIAPN--HRVGTKRYMAP 220
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVY 214
E+++ + + KR D++++G+V +
Sbjct: 221 EVLDDSINMKHFESFKRADIYAMGLVFW 248
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 51/103 (49%), Gaps = 7/103 (6%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
H EI+ + IAHRDLK +NIL C DLG ++ +++ +
Sbjct: 114 AHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTC-----CIADLGLAVRHDSATDTIDIA 168
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY 341
P VG+ +MAPE+++ + + KR D++++G+V +
Sbjct: 169 PN--HRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFW 209
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
IAHRDLK +NIL C DLG ++ +++ + P VG+ +MAP
Sbjct: 129 IAHRDLKSKNILVKKNGTC-----CIADLGLAVRHDSATDTIDIAPN--HRVGTKRYMAP 181
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVY 214
E+++ + + KR D++++G+V +
Sbjct: 182 EVLDDSINMKHFESFKRADIYAMGLVFW 209
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 54/101 (53%), Gaps = 15/101 (14%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN---TSVHSPLATPLLLT-PVGS 307
+G+ HRDLKP NI D VK+ DF L + + + +V +P+ T VG+
Sbjct: 137 KGLMHRDLKPSNIFFTMDD---VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGT 193
Query: 308 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
+M+PE ++ + Y + D++SLG++++ LL YP
Sbjct: 194 KLYMSPEQIH------GNSYSHKVDIFSLGLILFELL--YP 226
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 53/101 (52%), Gaps = 15/101 (14%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN---TSVHSPLATPLLLT-PVGS 180
K + HRDLKP NI D VK+ DF L + + + +V +P+ T VG+
Sbjct: 137 KGLMHRDLKPSNIFFTMDD---VVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGT 193
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 221
+M+PE ++ + Y + D++SLG++++ LL YP
Sbjct: 194 KLYMSPEQIH------GNSYSHKVDIFSLGLILFELL--YP 226
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 56 LGKGAYASVQTCVNILTELEYAVKIIDKLPGH--SRSRVFKEVETFHHCQGHPNIIQLLE 113
LG+G + V N + + YA+K I +LP +R +V +EV+ + HP I++
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRI-RLPNRELAREKVMREVKALAKLE-HPGIVRYFN 70
Query: 114 YYEDDENHER 123
+ + E+
Sbjct: 71 AWLEKNTTEK 80
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 54/120 (45%), Gaps = 27/120 (22%)
Query: 234 QRGETCHACQEI-LFHSIQQGI--------AHRDLKPENILCVHPDQLSPVKLCDFDLGS 284
+RGE + LF I +G+ HRDLKP NI V Q VK+ DF L +
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQ---VKIGDFGLVT 184
Query: 285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 344
+K + G+ +M+PE ++ + Y K DL++LG+++ LL
Sbjct: 185 SLKNDGK---------RTRSKGTLRYMSPEQIS------SQDYGKEVDLYALGLILAELL 229
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 18/93 (19%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K++ HRDLKP NI V Q VK+ DF L + +K + G+ +M
Sbjct: 155 KKLIHRDLKPSNIFLVDTKQ---VKIGDFGLVTSLKNDGK---------RTRSKGTLRYM 202
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 217
+PE ++ + Y K DL++LG+++ LL
Sbjct: 203 SPEQIS------SQDYGKEVDLYALGLILAELL 229
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 92/242 (38%), Gaps = 62/242 (25%)
Query: 237 ETCHACQEILFHSIQQGIAHRDLKPENILCVHPD----------------QLSPVKLCDF 280
+ CHA + H Q + H DLKPENIL V+ + + + +++ DF
Sbjct: 131 QLCHALR--FLHENQ--LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF 186
Query: 281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV 340
GS F+ H+ T V + + PE++ G+ + CD+WS+G ++
Sbjct: 187 --GSAT-FDHEHHT--------TIVATRHYRPPEVILEL------GWAQPCDVWSIGCIL 229
Query: 341 YILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEG-EWSTISDEAK-- 397
+ G+ F + + + + H ++ Y + G W S + +
Sbjct: 230 FEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYV 289
Query: 398 ----------------------DLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVT 435
DL+RR+L D +R++ A L HP+ + R T
Sbjct: 290 KENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSFHT 349
Query: 436 PQ 437
+
Sbjct: 350 SR 351
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 33/114 (28%)
Query: 126 RIAHRDLKPENILCVHPD----------------QLSPVKLCDFDLGSGIKFNTSVHSPL 169
++ H DLKPENIL V+ + + + +++ DF GS F+ H+
Sbjct: 143 QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF--GSAT-FDHEHHT-- 197
Query: 170 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
T V + + PE++ G+ + CD+WS+G +++ G+ F
Sbjct: 198 ------TIVATRHYRPPEVILEL------GWAQPCDVWSIGCILFEYYRGFTLF 239
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 52/121 (42%), Gaps = 28/121 (23%)
Query: 102 CQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIK 160
QG N I L HE H HRD+K NIL D+ K+ DF L + K
Sbjct: 133 AQGAANGINFL--------HENHH--IHRDIKSANILL---DEAFTAKISDFGLARASEK 179
Query: 161 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY 220
F V + VG+ +MAPE + + P + D++S GVV+ ++ G
Sbjct: 180 FAQXV-------MXXRIVGTTAYMAPEALRGEITP-------KSDIYSFGVVLLEIITGL 225
Query: 221 P 221
P
Sbjct: 226 P 226
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 18/94 (19%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 314
HRD+K NIL D+ K+ DF L + KF V + VG+ +MAPE
Sbjct: 150 HRDIKSANILL---DEAFTAKISDFGLARASEKFAQXV-------MXXRIVGTTAYMAPE 199
Query: 315 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
+ + P + D++S GVV+ ++ G P
Sbjct: 200 ALRGEITP-------KSDIYSFGVVLLEIITGLP 226
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K I HRD+K NI + VK+ DF L + +K S + + P GS +M
Sbjct: 151 KNIIHRDMKSNNIFL---HEGLTVKIGDFGLAT-VKSRWS-----GSQQVEQPTGSVLWM 201
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ + + + + D++S G+V+Y L+ G P+
Sbjct: 202 APEVIRM---QDNNPFSFQSDVYSYGIVLYELMTGELPY 237
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ I HRD+K NI + VK+ DF L + +K S + + P GS +M
Sbjct: 151 KNIIHRDMKSNNIFL---HEGLTVKIGDFGLAT-VKSRWS-----GSQQVEQPTGSVLWM 201
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
APE++ + + + + D++S G+V+Y L+ G P+
Sbjct: 202 APEVIRM---QDNNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 91/240 (37%), Gaps = 62/240 (25%)
Query: 237 ETCHACQEILFHSIQQGIAHRDLKPENILCVHPD----------------QLSPVKLCDF 280
+ CHA + H Q + H DLKPENIL V+ + + + +++ DF
Sbjct: 163 QLCHALR--FLHENQ--LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF 218
Query: 281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV 340
GS F+ H+ T V + + PE++ G+ + CD+WS+G ++
Sbjct: 219 --GSAT-FDHEHHT--------TIVATRHYRPPEVILEL------GWAQPCDVWSIGCIL 261
Query: 341 YILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEG-EWSTISDEAK-- 397
+ G+ F + + + + H ++ Y + G W S + +
Sbjct: 262 FEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYV 321
Query: 398 ----------------------DLIRRLLVKDARKRLSAASVLKHPWISTAGTAHRPLVT 435
DL+RR+L D +R++ A L HP+ + R T
Sbjct: 322 KENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFAGLTPEERSFHT 381
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 33/114 (28%)
Query: 126 RIAHRDLKPENILCVHPD----------------QLSPVKLCDFDLGSGIKFNTSVHSPL 169
++ H DLKPENIL V+ + + + +++ DF GS F+ H+
Sbjct: 175 QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF--GSAT-FDHEHHT-- 229
Query: 170 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
T V + + PE++ G+ + CD+WS+G +++ G+ F
Sbjct: 230 ------TIVATRHYRPPEVILEL------GWAQPCDVWSIGCILFEYYRGFTLF 271
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 87/236 (36%), Gaps = 80/236 (33%)
Query: 44 CFQDLYRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFK--------- 94
F+ YRL G +LGKG + +V + L+ A+K+I R+RV
Sbjct: 28 AFEAEYRL-GPLLGKGGFGTVFAGHRLTDRLQVAIKVI------PRNRVLGWSPLSDSVT 80
Query: 95 ---EVETFHHCQ---GHPNIIQLLEYYEDDE----------------------------- 119
EV GHP +I+LL+++E E
Sbjct: 81 CPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGP 140
Query: 120 ------------NHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS 167
H + + HRD+K ENIL + KL DF GSG + ++
Sbjct: 141 SRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL--RRGCAKLIDF--GSGALLHDEPYT 196
Query: 168 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
G+ + PE ++ + +WSLG+++Y ++CG PF
Sbjct: 197 DFD--------GTRVYSPPEWIS-----RHQYHALPATVWSLGILLYDMVCGDIPF 239
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 76/190 (40%), Gaps = 46/190 (24%)
Query: 236 GETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
G+ A Q H +G+ HRD+K ENIL + KL DF GSG + ++
Sbjct: 146 GQVVAAIQ----HCHSRGVVHRDIKDENILIDL--RRGCAKLIDF--GSGALLHDEPYTD 197
Query: 296 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCG 355
G+ + PE ++ + +WSLG+++Y ++CG PF +
Sbjct: 198 FD--------GTRVYSPPEWIS-----RHQYHALPATVWSLGILLYDMVCGDIPFERD-- 242
Query: 356 EDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAA 415
QEIL + FP + +S + LIRR L R S
Sbjct: 243 --------------QEIL-----EAELHFP----AHVSPDCCALIRRCLAPKPSSRPSLE 279
Query: 416 SVLKHPWIST 425
+L PW+ T
Sbjct: 280 EILLDPWMQT 289
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 228 GEDCGWQRGETCHACQEILFHSI-QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI 286
G R C +LF + + I H DLKPENIL +P + + +K+ DF GS
Sbjct: 153 GVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRXA-IKIVDF--GSSC 209
Query: 287 KFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG 346
+ ++ + + + +PE++ YD D+WSLG ++ + G
Sbjct: 210 QLGQRIYQXIQSRF---------YRSPEVLLGM------PYDLAIDMWSLGCILVEMHTG 254
Query: 347 YPPFYG 352
P F G
Sbjct: 255 EPLFSG 260
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 47/99 (47%), Gaps = 18/99 (18%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I H DLKPENIL +P + + +K+ DF GS + ++ + + + +P
Sbjct: 180 IIHCDLKPENILLCNPKRXA-IKIVDF--GSSCQLGQRIYQXIQSRF---------YRSP 227
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
E++ YD D+WSLG ++ + G P F G
Sbjct: 228 EVLLGM------PYDLAIDMWSLGCILVEMHTGEPLFSG 260
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 51/109 (46%), Gaps = 21/109 (19%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
RI H DLKPENIL + S +K+ DF GS + V+ + + + A
Sbjct: 220 RIIHCDLKPENILLKQQGR-SGIKVIDF--GSSCYEHQRVYXXIQSRF---------YRA 267
Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 234
PE++ + Y D+WSLG ++ LL GYP GED G Q
Sbjct: 268 PEVI------LGARYGMPIDMWSLGCILAELLTGYPLL---PGEDEGDQ 307
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 50/108 (46%), Gaps = 21/108 (19%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I H DLKPENIL + S +K+ DF GS + V+ + + + AP
Sbjct: 221 IIHCDLKPENILLKQQGR-SGIKVIDF--GSSCYEHQRVYXXIQSRF---------YRAP 268
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ 361
E++ + Y D+WSLG ++ LL GYP GED G Q
Sbjct: 269 EVI------LGARYGMPIDMWSLGCILAELLTGYPLL---PGEDEGDQ 307
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 78/197 (39%), Gaps = 59/197 (29%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 117 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 162
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 163 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 207
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ G F + +S E + LIR L
Sbjct: 208 IPFEHD----------------EEII-----GGQVFFRQ----RVSSECQHLIRWCLALR 242
Query: 408 ARKRLSAASVLKHPWIS 424
R + + HPW+
Sbjct: 243 PSDRPTFEEIQNHPWMQ 259
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/223 (23%), Positives = 88/223 (39%), Gaps = 73/223 (32%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 9 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 66
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 67 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 126
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 127 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 174
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+ PE + + + G A+ +WSLG+++Y ++CG PF
Sbjct: 175 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPF 210
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 82/230 (35%), Gaps = 65/230 (28%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSG--------IKFNTSVHSP------- 295
Q GI HRD+KP N L + +L L DF L G +KF S
Sbjct: 135 QFGIVHRDVKPSNFL--YNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNK 192
Query: 296 ----LATPLLLTP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
L+ + P G+ F APE++ + D+WS GV+ LL G PF
Sbjct: 193 CSICLSRRQQVAPRAGTPGFRAPEVLT-----KCPNQTTAIDMWSAGVIFLSLLSGRYPF 247
Query: 351 YGNCGEDCGWQRGETCHACQEIL------------------------------------- 373
Y + + T +E +
Sbjct: 248 YKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPK 307
Query: 374 FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWI 423
S QGH EG W+ + DEA DL+ +LL + R++A L HP+
Sbjct: 308 LTSDIQGHATNLEG-WNEVPDEAYDLLDKLLDLNPASRITAEEALLHPFF 356
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSG--------IKFNTSVHSP---------- 168
I HRD+KP N L + +L L DF L G +KF S
Sbjct: 138 IVHRDVKPSNFL--YNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQQERCSQNKCSI 195
Query: 169 -LATPLLLTP-VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
L+ + P G+ F APE++ + D+WS GV+ LL G PFY
Sbjct: 196 CLSRRQQVAPRAGTPGFRAPEVLT-----KCPNQTTAIDMWSAGVIFLSLLSGRYPFY 248
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 150 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 195
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 196 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 240
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ G F + +S E + LIR L
Sbjct: 241 IPFEHD----------------EEII-----GGQVFFRQ----RVSSECQHLIRWCLALR 275
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 276 PSDRPTFEEIQNHPWM 291
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 110/291 (37%), Gaps = 91/291 (31%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 42 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 99
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 160 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 207
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ---RGE 237
+ PE + + + G A+ +WSLG+++Y ++CG PF + E G Q R
Sbjct: 208 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPFEHD-EEIIGGQVFFRQR 259
Query: 238 TCHACQEIL-------------FHSIQQGIAHRD-LKPENILCVHPDQLSP 274
CQ ++ F IQ +D L P+ +H LSP
Sbjct: 260 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 310
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 149 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 194
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 195 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 239
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ G F + +S E + LIR L
Sbjct: 240 IPFEHD----------------EEII-----GGQVFFRQ----RVSSECQHLIRWCLALR 274
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 275 PSDRPTFEEIQNHPWM 290
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 110/291 (37%), Gaps = 91/291 (31%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 41 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 98
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 159 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 206
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ---RGE 237
+ PE + + + G A+ +WSLG+++Y ++CG PF + E G Q R
Sbjct: 207 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPFEHD-EEIIGGQVFFRQR 258
Query: 238 TCHACQEIL-------------FHSIQQGIAHRD-LKPENILCVHPDQLSP 274
CQ ++ F IQ +D L P+ +H LSP
Sbjct: 259 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 309
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 149 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 194
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 195 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 239
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ G F + +S E + LIR L
Sbjct: 240 IPFEHD----------------EEII-----GGQVFFRQ----RVSSECQHLIRWCLALR 274
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 275 PSDRPTFEEIQNHPWM 290
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 110/291 (37%), Gaps = 91/291 (31%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 41 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 98
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 159 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 206
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ---RGE 237
+ PE + + + G A+ +WSLG+++Y ++CG PF + E G Q R
Sbjct: 207 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPFEHD-EEIIGGQVFFRQR 258
Query: 238 TCHACQEIL-------------FHSIQQGIAHRD-LKPENILCVHPDQLSP 274
CQ ++ F IQ +D L P+ +H LSP
Sbjct: 259 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 309
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 150 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 195
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 196 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 240
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ G F + +S E + LIR L
Sbjct: 241 IPFEHD----------------EEII-----GGQVFFRQ----RVSSECQHLIRWCLALR 275
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 276 PSDRPTFEEIQNHPWM 291
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 110/291 (37%), Gaps = 91/291 (31%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 42 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 99
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 160 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 207
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ---RGE 237
+ PE + + + G A+ +WSLG+++Y ++CG PF + E G Q R
Sbjct: 208 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPFEHD-EEIIGGQVFFRQR 259
Query: 238 TCHACQEIL-------------FHSIQQGIAHRD-LKPENILCVHPDQLSP 274
CQ ++ F IQ +D L P+ +H LSP
Sbjct: 260 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 310
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 89/229 (38%), Gaps = 62/229 (27%)
Query: 237 ETCHACQEILFHSIQQGIAHRDLKPENILCVHPD----------------QLSPVKLCDF 280
+ CHA + H Q + H DLKPENIL V+ + + + +++ DF
Sbjct: 140 QLCHALR--FLHENQ--LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF 195
Query: 281 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV 340
GS F+ H+ T V + + PE++ G+ + CD+WS+G ++
Sbjct: 196 --GSAT-FDHEHHT--------TIVATRHYRPPEVILEL------GWAQPCDVWSIGCIL 238
Query: 341 YILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEG-EWSTISDEAK-- 397
+ G+ F + + + + H ++ Y + G W S + +
Sbjct: 239 FEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYV 298
Query: 398 ----------------------DLIRRLLVKDARKRLSAASVLKHPWIS 424
DL+RR+L D +R++ A L HP+ +
Sbjct: 299 KENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFFA 347
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 33/114 (28%)
Query: 126 RIAHRDLKPENILCVHPD----------------QLSPVKLCDFDLGSGIKFNTSVHSPL 169
++ H DLKPENIL V+ + + + +++ DF GS F+ H+
Sbjct: 152 QLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADF--GSAT-FDHEHHT-- 206
Query: 170 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
T V + + PE++ G+ + CD+WS+G +++ G+ F
Sbjct: 207 ------TIVATRHYRPPEVILEL------GWAQPCDVWSIGCILFEYYRGFTLF 248
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 151 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATEKSRWSGSHQ------FEQLSGSILWM 201
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 202 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 151 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATEKSRWSGSHQ------FEQLSGSILWM 201
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 202 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 143 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATEKSRWSGSHQ------FEQLSGSILWM 193
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 194 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 143 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATEKSRWSGSHQ------FEQLSGSILWM 193
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 194 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 229
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 150 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 195
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 196 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 240
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ G F + +S E + LIR L
Sbjct: 241 IPFEHD----------------EEII-----GGQVFFRQ----RVSXECQHLIRWCLALR 275
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 276 PSDRPTFEEIQNHPWM 291
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 110/291 (37%), Gaps = 91/291 (31%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 42 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 99
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 160 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 207
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ---RGE 237
+ PE + + + G A+ +WSLG+++Y ++CG PF + E G Q R
Sbjct: 208 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPFEHD-EEIIGGQVFFRQR 259
Query: 238 TCHACQEIL-------------FHSIQQGIAHRD-LKPENILCVHPDQLSP 274
CQ ++ F IQ +D L P+ +H LSP
Sbjct: 260 VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 310
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 149 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 194
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 195 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 239
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ G F + +S E + LIR L
Sbjct: 240 IPFEHD----------------EEII-----GGQVFFRQ----RVSXECQHLIRWCLALR 274
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 275 PSDRPTFEEIQNHPWM 290
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 110/291 (37%), Gaps = 91/291 (31%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 41 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 98
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 99 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 158
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 159 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 206
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ---RGE 237
+ PE + + + G A+ +WSLG+++Y ++CG PF + E G Q R
Sbjct: 207 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPFEHD-EEIIGGQVFFRQR 258
Query: 238 TCHACQEIL-------------FHSIQQGIAHRD-LKPENILCVHPDQLSP 274
CQ ++ F IQ +D L P+ +H LSP
Sbjct: 259 VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 309
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 78/196 (39%), Gaps = 59/196 (30%)
Query: 233 WQRGET---CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN 289
WQ E CH C G+ HRD+K ENIL L+ +L D GSG
Sbjct: 150 WQVLEAVRHCHNC----------GVLHRDIKDENILI----DLNRGELKLIDFGSGALLK 195
Query: 290 TSVHSPLATPLLLTPVGSAEFMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGY 347
+V++ G+ + PE + + + G A+ +WSLG+++Y ++CG
Sbjct: 196 DTVYTDFD--------GTRVYSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGD 240
Query: 348 PPFYGNCGEDCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKD 407
PF + +EI+ G F + +S E + LIR L
Sbjct: 241 IPFEHD----------------EEII-----GGQVFFRQ----RVSXECQHLIRWCLALR 275
Query: 408 ARKRLSAASVLKHPWI 423
R + + HPW+
Sbjct: 276 PSDRPTFEEIQNHPWM 291
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/291 (23%), Positives = 110/291 (37%), Gaps = 91/291 (31%)
Query: 53 GEILGKGAYASVQTCVNILTELEYAVKIIDK--------LPGHSRSRVFKEVETFHHCQ- 103
G +LG G + SV + + + L A+K ++K LP + +RV EV
Sbjct: 42 GPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELP--NGTRVPMEVVLLKKVSS 99
Query: 104 GHPNIIQLLEYYEDDEN------------------------HERHKR------------- 126
G +I+LL+++E ++ E R
Sbjct: 100 GFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFFWQVLEAVRHC 159
Query: 127 ----IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+ HRD+K ENIL L+ +L D GSG +V++ G+
Sbjct: 160 HNCGVLHRDIKDENILI----DLNRGELKLIDFGSGALLKDTVYTDFD--------GTRV 207
Query: 183 FMAPEIV--NAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ---RGE 237
+ PE + + + G A+ +WSLG+++Y ++CG PF + E G Q R
Sbjct: 208 YSPPEWIRYHRYHGRSAA-------VWSLGILLYDMVCGDIPFEHD-EEIIGGQVFFRQR 259
Query: 238 TCHACQEIL-------------FHSIQQGIAHRD-LKPENILCVHPDQLSP 274
CQ ++ F IQ +D L P+ +H LSP
Sbjct: 260 VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVLLPQETAEIHLHSLSP 310
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 32/185 (17%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSP--------VKLCDFDLGSGIKFNTSVHSPLAT 298
HS++ I HRDLKP+NIL + + +++ D G K ++
Sbjct: 149 LHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED 357
L P G++ + APE++ + + D++S+G V YIL G PF +
Sbjct: 207 --LNNPSGTSGWRAPELLEESTKRRLT---RSIDIFSMGCVFYYILSKGKHPFGDKYSRE 261
Query: 358 CGWQRGETCHACQEIL-FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
RG + E+ H ++ EA DLI +++ D KR +A
Sbjct: 262 SNIIRG--IFSLDEMKCLHD-------------RSLIAEATDLISQMIDHDPLKRPTAMK 306
Query: 417 VLKHP 421
VL+HP
Sbjct: 307 VLRHP 311
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 14/144 (9%)
Query: 102 CQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSP--------VKLCDF 153
Q N I LL H +I HRDLKP+NIL + + +++
Sbjct: 129 LQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 188
Query: 154 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VV 212
D G K ++ L P G++ + APE++ + + D++S+G V
Sbjct: 189 DFGLCKKLDSGQXXFRXN--LNNPSGTSGWRAPELLEESTKRRLT---RSIDIFSMGCVF 243
Query: 213 VYILLCGYPPFYGNCGEDCGWQRG 236
YIL G PF + RG
Sbjct: 244 YYILSKGKHPFGDKYSRESNIIRG 267
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 78/185 (42%), Gaps = 32/185 (17%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSP--------VKLCDFDLGSGIKFNTSVHSPLAT 298
HS++ I HRDLKP+NIL + + +++ D G K ++
Sbjct: 149 LHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 206
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VVVYILLCGYPPFYGNCGED 357
L P G++ + APE++ + + D++S+G V YIL G PF +
Sbjct: 207 --LNNPSGTSGWRAPELLEESTKRRLT---RSIDIFSMGCVFYYILSKGKHPFGDKYSRE 261
Query: 358 CGWQRGETCHACQEIL-FHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
RG + E+ H ++ EA DLI +++ D KR +A
Sbjct: 262 SNIIRG--IFSLDEMKCLHD-------------RSLIAEATDLISQMIDHDPLKRPTAMK 306
Query: 417 VLKHP 421
VL+HP
Sbjct: 307 VLRHP 311
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 57/144 (39%), Gaps = 14/144 (9%)
Query: 102 CQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSP--------VKLCDF 153
Q N I LL H +I HRDLKP+NIL + + +++
Sbjct: 129 LQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 188
Query: 154 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG-VV 212
D G K ++ L P G++ + APE++ + + D++S+G V
Sbjct: 189 DFGLCKKLDSGQXXFRXN--LNNPSGTSGWRAPELLEESTKRRLT---RSIDIFSMGCVF 243
Query: 213 VYILLCGYPPFYGNCGEDCGWQRG 236
YIL G PF + RG
Sbjct: 244 YYILSKGKHPFGDKYSRESNIIRG 267
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 123 KSIIHRDLKSNNIF-LHED--LTVKIGDFGLATEKSRWSGSHQ------FEQLSGSILWM 173
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 174 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 123 KSIIHRDLKSNNIF-LHED--LTVKIGDFGLATEKSRWSGSHQ------FEQLSGSILWM 173
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 174 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 81/200 (40%), Gaps = 46/200 (23%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
HS Q + HRDLKP N+L ++ +K+ DF + G+ + + H T V
Sbjct: 174 MHSAQ--VIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEY----VA 224
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
+ + APE++ + Y + DLWS+G + +L F G
Sbjct: 225 TRWYRAPELMLSL-----HEYTQAIDLWSVGCIFGEMLARRQLFPGK----------NYV 269
Query: 367 HACQEILF---------------HSIQQGHYDFPEGE---WSTI----SDEAKDLIRRLL 404
H Q I+ ++ P + W T+ +A L+ R+L
Sbjct: 270 HQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRML 329
Query: 405 VKDARKRLSAASVLKHPWIS 424
+ R+SAA+ L+HP+++
Sbjct: 330 RFEPSARISAAAALRHPFLA 349
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 83/223 (37%), Gaps = 66/223 (29%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGH-----SRSRVFKEVETFHHCQGHPNI 108
E +G GAY V + LT + A+K K+P + R +E++ H + H NI
Sbjct: 60 ETIGNGAYGVVSSARRRLTGQQVAIK---KIPNAFDVVTNAKRTLRELKILKHFK-HDNI 115
Query: 109 IQL-------------------LEYYEDDENHERHK------------------------ 125
I + L+ E D + H
Sbjct: 116 IAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH 175
Query: 126 --RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
++ HRDLKP N+L ++ +K+ DF + G+ + + H T V + +
Sbjct: 176 SAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEY----VATRWY 228
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
APE++ + Y + DLWS+G + +L F G
Sbjct: 229 RAPELMLSL-----HEYTQAIDLWSVGCIFGEMLARRQLFPGK 266
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 81/200 (40%), Gaps = 46/200 (23%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
HS Q + HRDLKP N+L ++ +K+ DF + G+ + + H T V
Sbjct: 175 MHSAQ--VIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEY----VA 225
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETC 366
+ + APE++ + Y + DLWS+G + +L F G
Sbjct: 226 TRWYRAPELMLSL-----HEYTQAIDLWSVGCIFGEMLARRQLFPGK----------NYV 270
Query: 367 HACQEILF---------------HSIQQGHYDFPEGE---WSTI----SDEAKDLIRRLL 404
H Q I+ ++ P + W T+ +A L+ R+L
Sbjct: 271 HQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRML 330
Query: 405 VKDARKRLSAASVLKHPWIS 424
+ R+SAA+ L+HP+++
Sbjct: 331 RFEPSARISAAAALRHPFLA 350
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 83/223 (37%), Gaps = 66/223 (29%)
Query: 54 EILGKGAYASVQTCVNILTELEYAVKIIDKLPGH-----SRSRVFKEVETFHHCQGHPNI 108
E +G GAY V + LT + A+K K+P + R +E++ H + H NI
Sbjct: 61 ETIGNGAYGVVSSARRRLTGQQVAIK---KIPNAFDVVTNAKRTLRELKILKHFK-HDNI 116
Query: 109 IQL-------------------LEYYEDDENHERHK------------------------ 125
I + L+ E D + H
Sbjct: 117 IAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMH 176
Query: 126 --RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
++ HRDLKP N+L ++ +K+ DF + G+ + + H T V + +
Sbjct: 177 SAQVIHRDLKPSNLLV---NENCELKIGDFGMARGLCTSPAEHQYFMTEY----VATRWY 229
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
APE++ + Y + DLWS+G + +L F G
Sbjct: 230 RAPELMLSL-----HEYTQAIDLWSVGCIFGEMLARRQLFPGK 267
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 76/190 (40%), Gaps = 38/190 (20%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSP--------VKLCDFDLGSGIKFNTSVHSPLAT 298
HS++ I HRDLKP+NIL + + +++ D G K ++
Sbjct: 131 LHSLK--IIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXN 188
Query: 299 PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR-CDLWSLG-VVVYILLCGYPPFYGNCGE 356
L P G++ + APE++ + R D++S+G V YIL G PF
Sbjct: 189 --LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSR 246
Query: 357 DCGWQRGETCHACQEILFHSIQQGHYDFPEGEWSTISD-----EAKDLIRRLLVKDARKR 411
+ RG F E + D EA DLI +++ D KR
Sbjct: 247 ESNIIRGI-------------------FSLDEMKCLHDRSLIAEATDLISQMIDHDPLKR 287
Query: 412 LSAASVLKHP 421
+A VL+HP
Sbjct: 288 PTAMKVLRHP 297
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 12/145 (8%)
Query: 102 CQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSP--------VKLCDF 153
Q N I LL H +I HRDLKP+NIL + + +++
Sbjct: 111 LQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILIS 170
Query: 154 DLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKR-CDLWSLG-V 211
D G K ++ L P G++ + APE++ + R D++S+G V
Sbjct: 171 DFGLCKKLDSGQXXFRXN--LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCV 228
Query: 212 VVYILLCGYPPFYGNCGEDCGWQRG 236
YIL G PF + RG
Sbjct: 229 FYYILSKGKHPFGDKYSRESNIIRG 253
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 151 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 201
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 202 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 151 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 201
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 202 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 237
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 125 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 175
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 176 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 125 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 175
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 176 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 211
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 150 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 200
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 201 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 150 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 200
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 201 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 236
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 128 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 178
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 179 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 128 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 178
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 179 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 123 KSIIHRDLKSNNIF-LHED--LTVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 173
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 174 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 123 KSIIHRDLKSNNIF-LHED--LTVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 173
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 174 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 79/204 (38%), Gaps = 49/204 (24%)
Query: 253 GIAHRDLKPENIL---CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 309
GI H D+KPEN+L P+ L +K+ DLG+ ++ + + T E
Sbjct: 152 GIIHTDIKPENVLMEIVDSPENLIQIKIA--DLGNACWYDEHYTNSIQT---------RE 200
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG---YPPFYGNCGEDCGWQRGETC 366
+ +PE++ P G D+WS +++ L+ G + P G+ +
Sbjct: 201 YRSPEVL--LGAPWGCG----ADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII 254
Query: 367 HACQEILFHSIQQGHY-----------------------DFPEGEWSTISDEAK---DLI 400
E+ + ++ G Y D ++ DEAK D +
Sbjct: 255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFL 314
Query: 401 RRLLVKDARKRLSAASVLKHPWIS 424
+L D RKR A ++ HPW+
Sbjct: 315 SPMLQLDPRKRADAGGLVNHPWLK 338
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 22/101 (21%)
Query: 124 HKR--IAHRDLKPENIL---CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
H+R I H D+KPEN+L P+ L +K+ DLG+ ++ + + T
Sbjct: 148 HRRCGIIHTDIKPENVLMEIVDSPENLIQIKIA--DLGNACWYDEHYTNSIQT------- 198
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG 219
E+ +PE++ P G D+WS +++ L+ G
Sbjct: 199 --REYRSPEVL--LGAPWGCG----ADIWSTACLIFELITG 231
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 128 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 178
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 179 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 128 KSIIHRDLKSNNIF-LHEDL--TVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 178
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 179 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 214
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 84/231 (36%), Gaps = 65/231 (28%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH--------------SPL 296
+ GI HRDLKP N L +Q VK+CDF L I + +H P
Sbjct: 149 ESGIIHRDLKPANCLL---NQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPH 205
Query: 297 ATPL---LLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
L L + V + + APE++ Y D+WS G + LL N
Sbjct: 206 NKNLKKQLTSHVVTRWYRAPELILL-----QENYTNSIDIWSTGCIFAELLNMMKSHINN 260
Query: 354 CGEDCGWQRGETC------HACQE-----------ILFHSIQQGHYD------------- 383
G +C H ++ I+F+ I +
Sbjct: 261 PTNRFPLFPGSSCFPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEEDLKCITKQEVIKY 320
Query: 384 ---FP-------EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
FP ++S+IS E DL+ +L +A+KR++ L HP++
Sbjct: 321 IKLFPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYLK 371
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 43/108 (39%), Gaps = 25/108 (23%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH--------------SPLATP 172
I HRDLKP N L +Q VK+CDF L I + +H P
Sbjct: 152 IIHRDLKPANCLL---NQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKN 208
Query: 173 L---LLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 217
L L + V + + APE++ Y D+WS G + LL
Sbjct: 209 LKKQLTSHVVTRWYRAPELILL-----QENYTNSIDIWSTGCIFAELL 251
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/204 (22%), Positives = 79/204 (38%), Gaps = 49/204 (24%)
Query: 253 GIAHRDLKPENIL---CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 309
GI H D+KPEN+L P+ L +K+ DLG+ ++ + + T E
Sbjct: 152 GIIHTDIKPENVLMEIVDSPENLIQIKIA--DLGNACWYDEHYTNSIQT---------RE 200
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG---YPPFYGNCGEDCGWQRGETC 366
+ +PE++ P G D+WS +++ L+ G + P G+ +
Sbjct: 201 YRSPEVL--LGAPWGCG----ADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQII 254
Query: 367 HACQEILFHSIQQGHY-----------------------DFPEGEWSTISDEAK---DLI 400
E+ + ++ G Y D ++ DEAK D +
Sbjct: 255 ELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFL 314
Query: 401 RRLLVKDARKRLSAASVLKHPWIS 424
+L D RKR A ++ HPW+
Sbjct: 315 SPMLQLDPRKRADAGGLVNHPWLK 338
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 47/101 (46%), Gaps = 22/101 (21%)
Query: 124 HKR--IAHRDLKPENIL---CVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
H+R I H D+KPEN+L P+ L +K+ DLG+ ++ + + T
Sbjct: 148 HRRCGIIHTDIKPENVLMEIVDSPENLIQIKIA--DLGNACWYDEHYTNSIQT------- 198
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG 219
E+ +PE++ P G D+WS +++ L+ G
Sbjct: 199 --REYRSPEVL--LGAPWGCG----ADIWSTACLIFELITG 231
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 123 KSIIHRDLKSNNIF-LHED--LTVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 173
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 174 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 48/99 (48%), Gaps = 12/99 (12%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ I HRDLK NI +H D VK+ DF L + + H GS +M
Sbjct: 123 KSIIHRDLKSNNIF-LHED--LTVKIGDFGLATVKSRWSGSHQ------FEQLSGSILWM 173
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 350
APE++ + + Y + D+++ G+V+Y L+ G P+
Sbjct: 174 APEVIRM---QDKNPYSFQSDVYAFGIVLYELMTGQLPY 209
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 18/104 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKPENIL VKL DF L + ++ P+++T + AP
Sbjct: 133 IVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMAL-----APVVVT----LWYRAP 180
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ S Y D+WS+G + + P F GN D
Sbjct: 181 EVLL------QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 218
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 18/104 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKPENIL VKL DF L + ++ P+++T + AP
Sbjct: 133 IVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMAL-----APVVVT----LWYRAP 180
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
E++ S Y D+WS+G + + P F GN D
Sbjct: 181 EVLL------QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 218
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 20/108 (18%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAE 182
+R+ HRDLKP+N+L +L K+ DF L GI H V +
Sbjct: 119 RRVLHRDLKPQNLLINREGEL---KIADFGLARAFGIPVRKYTHE----------VVTLW 165
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
+ AP+++ MG + Y D+WS+G + ++ G P F G D
Sbjct: 166 YRAPDVL---MG--SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD 208
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 74/183 (40%), Gaps = 30/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L +L K+ DF L GI H V + +
Sbjct: 121 VLHRDLKPQNLLINREGEL---KIADFGLARAFGIPVRKYTHE----------VVTLWYR 167
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRG 363
AP+++ MG + Y D+WS+G + ++ G P F G D G
Sbjct: 168 APDVL---MG--SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNS 222
Query: 364 ETCHACQEILFHSIQQGHYD-FP-EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ E+ + Y+ P E + + DL+ ++L D +R++A L+H
Sbjct: 223 KNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHA 282
Query: 422 WIS 424
+
Sbjct: 283 YFK 285
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 49/108 (45%), Gaps = 20/108 (18%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAE 182
+R+ HRDLKP+N+L +L K+ DF L GI H V +
Sbjct: 119 RRVLHRDLKPQNLLINREGEL---KIADFGLARAFGIPVRKYTHE----------VVTLW 165
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
+ AP+++ MG + Y D+WS+G + ++ G P F G D
Sbjct: 166 YRAPDVL---MG--SKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEAD 208
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 74/183 (40%), Gaps = 30/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L +L K+ DF L GI H V + +
Sbjct: 121 VLHRDLKPQNLLINREGEL---KIADFGLARAFGIPVRKYTHE----------VVTLWYR 167
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRG 363
AP+++ MG + Y D+WS+G + ++ G P F G D G
Sbjct: 168 APDVL---MG--SKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNS 222
Query: 364 ETCHACQEILFHSIQQGHYD-FP-EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ E+ + Y+ P E + + DL+ ++L D +R++A L+H
Sbjct: 223 KNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHA 282
Query: 422 WIS 424
+
Sbjct: 283 YFK 285
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 89/226 (39%), Gaps = 42/226 (18%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 310
Q I HRDLKP N+L D+ +KL DF L S SP V + +
Sbjct: 130 QHWILHRDLKPNNLLL---DENGVLKLADFGLAK------SFGSP--NRAYXHQVVTRWY 178
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET----- 365
APE++ A Y D+W++G ++ LL P G+ D + ET
Sbjct: 179 RAPELLFG-----ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPT 233
Query: 366 -------CHACQEILFHSIQQ--GHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAAS 416
C + F S H+ F S D+ DLI+ L + + R++A
Sbjct: 234 EEQWPDMCSLPDYVTFKSFPGIPLHHIF-----SAAGDDLLDLIQGLFLFNPCARITATQ 288
Query: 417 VLKHPWISTAGTAHRPLVTP--QVIRRNQSARELSSFAESAMSANR 460
LK + S +RP TP Q+ R N L + A++ R
Sbjct: 289 ALKMKYFS-----NRPGPTPGCQLPRPNCPVETLKEQSNPALAIKR 329
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 81/225 (36%), Gaps = 64/225 (28%)
Query: 52 KGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSR------VFKEVETFHHCQGH 105
K + LG+G +A+V + T A+K I KL S ++ +E++ H
Sbjct: 14 KLDFLGEGQFATVYKARDKNTNQIVAIKKI-KLGHRSEAKDGINRTALREIKLLQEL-SH 71
Query: 106 PNIIQLLEYYEDDEN----------------------------------------HERHK 125
PNII LL+ + N +
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQH 131
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 185
I HRDLKP N+L D+ +KL DF L S SP V + + A
Sbjct: 132 WILHRDLKPNNLLL---DENGVLKLADFGLAK------SFGSP--NRAYXHQVVTRWYRA 180
Query: 186 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
PE++ A Y D+W++G ++ LL P G+ D
Sbjct: 181 PELLFG-----ARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLD 220
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 18/104 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKPENIL VKL DF L + ++ P+++T + AP
Sbjct: 133 IVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMALF-----PVVVT----LWYRAP 180
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ S Y D+WS+G + + P F GN D
Sbjct: 181 EVLL------QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 218
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 18/104 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKPENIL VKL DF L + ++ P+++T + AP
Sbjct: 133 IVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMALF-----PVVVT----LWYRAP 180
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
E++ S Y D+WS+G + + P F GN D
Sbjct: 181 EVLL------QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 218
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 18/104 (17%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I HRDLKPENIL VKL DF L + ++ P+++T + AP
Sbjct: 133 IVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMAL-----DPVVVT----LWYRAP 180
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
E++ S Y D+WS+G + + P F GN D
Sbjct: 181 EVLL------QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 218
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 18/104 (17%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
I HRDLKPENIL VKL DF L + ++ P+++T + AP
Sbjct: 133 IVHRDLKPENILVTSGGT---VKLADFGLARIYSYQMAL-----DPVVVT----LWYRAP 180
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 357
E++ S Y D+WS+G + + P F GN D
Sbjct: 181 EVLL------QSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD 218
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 27/120 (22%)
Query: 234 QRGETCHACQEI-LFHSIQQGIAH--------RDLKPENILCVHPDQLSPVKLCDFDLGS 284
+RGE + LF I +G+ + RDLKP NI V Q VK+ DF L +
Sbjct: 114 RRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQ---VKIGDFGLVT 170
Query: 285 GIKFNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 344
+K + G+ +M+PE ++ + Y K DL++LG+++ LL
Sbjct: 171 SLKNDGKRXR---------SKGTLRYMSPEQIS------SQDYGKEVDLYALGLILAELL 215
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 18/109 (16%)
Query: 109 IQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 168
++L E ++ K++ +RDLKP NI V Q VK+ DF L + +K +
Sbjct: 125 LELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQ---VKIGDFGLVTSLKNDGKRXR- 180
Query: 169 LATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 217
G+ +M+PE ++ + Y K DL++LG+++ LL
Sbjct: 181 --------SKGTLRYMSPEQIS------SQDYGKEVDLYALGLILAELL 215
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 49/108 (45%), Gaps = 20/108 (18%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAE 182
+R+ HRDLKP+N+L +L K+ DF L GI H + +
Sbjct: 119 RRVLHRDLKPQNLLINREGEL---KIADFGLARAFGIPVRKYTHE----------IVTLW 165
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
+ AP+++ MG + Y D+WS+G + ++ G P F G D
Sbjct: 166 YRAPDVL---MG--SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEAD 208
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 74/183 (40%), Gaps = 30/183 (16%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ HRDLKP+N+L +L K+ DF L GI H + + +
Sbjct: 121 VLHRDLKPQNLLINREGEL---KIADFGLARAFGIPVRKYTHE----------IVTLWYR 167
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED--------CGWQRG 363
AP+++ MG + Y D+WS+G + ++ G P F G D G
Sbjct: 168 APDVL---MG--SKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNS 222
Query: 364 ETCHACQEILFHSIQQGHYD-FP-EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
+ E+ + Y+ P E + + DL+ ++L D +R++A L+H
Sbjct: 223 KNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHA 282
Query: 422 WIS 424
+
Sbjct: 283 YFK 285
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 32/172 (18%)
Query: 254 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 313
+ HRD+KP N+L + L VK CDF + SG + A G + AP
Sbjct: 158 VIHRDVKPSNVLI---NALGQVKXCDFGI-SGYLVDDVAKDIDA--------GCKPYXAP 205
Query: 314 EIVNAFMGPEASGYDKRCDLWSLGVV-VYILLCGYPPFYGNCGEDCGWQRGETCHACQEI 372
E +N + GY + D+WSLG+ + + + +P Y + G +Q+
Sbjct: 206 ERINPELN--QKGYSVKSDIWSLGITXIELAILRFP--YDSWG--TPFQQ---------- 249
Query: 373 LFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
L +++ P ++S E D + L K++++R + + +HP+ +
Sbjct: 250 LKQVVEEPSPQLPADKFSA---EFVDFTSQCLKKNSKERPTYPELXQHPFFT 298
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 14/85 (16%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRD+KP N+L + L VK CDF + SG + A G + AP
Sbjct: 158 VIHRDVKPSNVLI---NALGQVKXCDFGI-SGYLVDDVAKDIDA--------GCKPYXAP 205
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGV 211
E +N + GY + D+WSLG+
Sbjct: 206 ERINPELN--QKGYSVKSDIWSLGI 228
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 56/126 (44%), Gaps = 23/126 (18%)
Query: 239 CHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLAT 298
H EI + IAHRD K N+L S ++ C DLG + +HS +
Sbjct: 119 AHLHVEIFGTQGKPAIAHRDFKSRNVLVK-----SNLQCCIADLGLAV-----MHSQGSD 168
Query: 299 PLLLT---PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY----------ILLC 345
L + VG+ +MAPE+++ + + K D+W+ G+V++ I+
Sbjct: 169 YLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVED 228
Query: 346 GYPPFY 351
PPFY
Sbjct: 229 YRPPFY 234
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 52/111 (46%), Gaps = 23/111 (20%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLT---PVGSAEF 183
IAHRD K N+L S ++ C DLG + +HS + L + VG+ +
Sbjct: 134 IAHRDFKSRNVLVK-----SNLQCCIADLGLAV-----MHSQGSDYLDIGNNPRVGTKRY 183
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVY----------ILLCGYPPFY 224
MAPE+++ + + K D+W+ G+V++ I+ PPFY
Sbjct: 184 MAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFY 234
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 74/177 (41%), Gaps = 41/177 (23%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDF-DLGSGIKFNTSVHSPLATPLLLTP 304
L H QG+ H D+KP NI L P C D G ++ T+ +
Sbjct: 170 LAHLHSQGLVHLDVKPANIF------LGPRGRCKLGDFGLLVELGTAGAGEVQE------ 217
Query: 305 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGE 364
G +MAPE++ G A D++SLG+ + + C +G GE GWQ+
Sbjct: 218 -GDPRYMAPELLQGSYGTAA-------DVFSLGLTILEVACNMELPHG--GE--GWQQ-- 263
Query: 365 TCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHP 421
++QG+ P + +S E + ++ +L D + R +A ++L P
Sbjct: 264 ------------LRQGY--LPPEFTAGLSSELRSVLVMMLEPDPKLRATAEALLALP 306
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 50/121 (41%), Gaps = 28/121 (23%)
Query: 102 CQGHPNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLG-SGIK 160
QG N I L HE H HRD+K NIL D+ K+ DF L + K
Sbjct: 130 AQGAANGINFL--------HENHH--IHRDIKSANILL---DEAFTAKISDFGLARASEK 176
Query: 161 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGY 220
F V VG+ + APE + + P + D++S GVV+ ++ G
Sbjct: 177 FAQXVXXSRI-------VGTTAYXAPEALRGEITP-------KSDIYSFGVVLLEIITGL 222
Query: 221 P 221
P
Sbjct: 223 P 223
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 18/94 (19%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLG-SGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 314
HRD+K NIL D+ K+ DF L + KF V VG+ + APE
Sbjct: 147 HRDIKSANILL---DEAFTAKISDFGLARASEKFAQXVXXSRI-------VGTTAYXAPE 196
Query: 315 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYP 348
+ + P + D++S GVV+ ++ G P
Sbjct: 197 ALRGEITP-------KSDIYSFGVVLLEIITGLP 223
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 125 KRIAHRDLKPENILCVHPDQLSP--VKLCDFDLGSG-IKFNTSVHSPLATPLLLTPVGSA 181
K + +RD+KPEN L P + + + DF L I T H P LT G+A
Sbjct: 124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLT--GTA 181
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
+M+ +N +G E S +R DL +LG + L G P+ G
Sbjct: 182 RYMS---INTHLGKEQS---RRDDLEALGHMFMYFLRGSLPWQG 219
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 252 QGIAHRDLKPENILCVHPDQLSP--VKLCDFDLGSG-IKFNTSVHSPLATPLLLTPVGSA 308
+ + +RD+KPEN L P + + + DF L I T H P LT G+A
Sbjct: 124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLAKEYIDPETKKHIPYREHKSLT--GTA 181
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
+M+ +N +G E S +R DL +LG + L G P+ G
Sbjct: 182 RYMS---INTHLGKEQS---RRDDLEALGHMFMYFLRGSLPWQG 219
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 84/245 (34%), Gaps = 89/245 (36%)
Query: 53 GEILGKGAYASVQTCV-----NILTELEYAVKII-DKLPGHSRSRVFKEVETFHHCQGHP 106
G++LG GA+ V ++ AVK++ +K R + E++ H
Sbjct: 50 GKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHE 109
Query: 107 NIIQLL------------------------------EYYEDDENHERHKRI--------- 127
NI+ LL ++ ED+ +E KR+
Sbjct: 110 NIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVL 169
Query: 128 ------------------------AHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KF 161
HRDL N+L H VK+CDF L I
Sbjct: 170 TFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHG---KVVKICDFGLARDIMSDS 226
Query: 162 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGY 220
N V P+ ++MAPE + F G Y + D+WS G++++ I G
Sbjct: 227 NYVVRGNARLPV--------KWMAPE--SLFEGI----YTIKSDVWSYGILLWEIFSLGV 272
Query: 221 PPFYG 225
P+ G
Sbjct: 273 NPYPG 277
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 20/101 (19%)
Query: 255 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAEFMA 312
HRDL N+L H VK+CDF L I N V P+ ++MA
Sbjct: 194 VHRDLAARNVLVTHG---KVVKICDFGLARDIMSDSNYVVRGNARLPV--------KWMA 242
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 352
PE + F G Y + D+WS G++++ I G P+ G
Sbjct: 243 PE--SLFEGI----YTIKSDVWSYGILLWEIFSLGVNPYPG 277
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 27/184 (14%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ + HRDLKP+N+L +L KL +F L +S L P
Sbjct: 120 RNVLHRDLKPQNLLINRNGEL---KLANFGLARAFGIPVRCYSAEVVTLWYRP------- 169
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILL-CGYPPFYGNCGEDCGWQRGETCHACQ 370
P+++ A Y D+WS G + L G P F GN +D +
Sbjct: 170 -PDVLFG-----AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT 223
Query: 371 EILFHSIQQ--GHYDFPEGEWST--------ISDEAKDLIRRLLVKDARKRLSAASVLKH 420
E + S+ + + +P +T ++ +DL++ LL + +R+SA L+H
Sbjct: 224 EEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283
Query: 421 PWIS 424
P+ S
Sbjct: 284 PYFS 287
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 17/107 (15%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
+ + HRDLKP+N+L +L KL +F L +S L P
Sbjct: 120 RNVLHRDLKPQNLLINRNGEL---KLANFGLARAFGIPVRCYSAEVVTLWYRP------- 169
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILL-CGYPPFYGNCGED 230
P+++ A Y D+WS G + L G P F GN +D
Sbjct: 170 -PDVLFG-----AKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDD 210
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 16/98 (16%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRD+KPENIL V D + L DF + S L VG+ + APE
Sbjct: 157 HRDVKPENIL-VSADDFA--YLVDFGIASATTDEKLTQ-------LGNTVGTLYYXAPE- 205
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 226
F A+ R D+++L V+Y L G PP+ G+
Sbjct: 206 --RFSESHAT---YRADIYALTCVLYECLTGSPPYQGD 238
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 45/98 (45%), Gaps = 16/98 (16%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
HRD+KPENIL V D + L DF + S L VG+ + APE
Sbjct: 157 HRDVKPENIL-VSADDFA--YLVDFGIASATTDEKLTQ-------LGNTVGTLYYXAPE- 205
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
F A+ R D+++L V+Y L G PP+ G+
Sbjct: 206 --RFSESHAT---YRADIYALTCVLYECLTGSPPYQGD 238
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN----TSVHSPLATPLLLTPVGS 180
K + +RD+KP+N L P+ + + D G +KF T H P L+ G+
Sbjct: 124 KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM-VKFYRDPVTKQHIPYREKKNLS--GT 180
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
A +M+ +N +G E S +R DL +LG V L G P+ G
Sbjct: 181 ARYMS---INTHLGREQS---RRDDLEALGHVFMYFLRGSLPWQG 219
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN----TSVHSPLATPLLLTPVG 306
++ + +RD+KP+N L P+ + + D G +KF T H P L+ G
Sbjct: 123 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM-VKFYRDPVTKQHIPYREKKNLS--G 179
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
+A +M+ +N +G E S +R DL +LG V L G P+ G
Sbjct: 180 TARYMS---INTHLGREQS---RRDDLEALGHVFMYFLRGSLPWQG 219
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 125 KRIAHRDLKPENILCVHPDQLSP--VKLCDFDLGSG-IKFNTSVHSPLATPLLLTPVGSA 181
K + +RD+KPEN L P + + + DF L I T H P LT G+A
Sbjct: 124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLT--GTA 181
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
+M+ +N +G E S +R DL +LG + L G P+ G
Sbjct: 182 RYMS---INTHLGKEQS---RRDDLEALGHMFMYFLRGSLPWQG 219
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 252 QGIAHRDLKPENILCVHPDQLSP--VKLCDFDLGSG-IKFNTSVHSPLATPLLLTPVGSA 308
+ + +RD+KPEN L P + + + DF L I T H P LT G+A
Sbjct: 124 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLT--GTA 181
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
+M+ +N +G E S +R DL +LG + L G P+ G
Sbjct: 182 RYMS---INTHLGKEQS---RRDDLEALGHMFMYFLRGSLPWQG 219
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 13/105 (12%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN----TSVHSPLATPLLLTPVGS 180
K + +RD+KP+N L P+ + + D G +KF T H P L+ G+
Sbjct: 125 KSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM-VKFYRDPVTKQHIPYREKKNLS--GT 181
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
A +M+ +N +G E S +R DL +LG V L G P+ G
Sbjct: 182 ARYMS---INTHLGREQS---RRDDLEALGHVFMYFLRGSLPWQG 220
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 13/106 (12%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN----TSVHSPLATPLLLTPVG 306
++ + +RD+KP+N L P+ + + D G +KF T H P L+ G
Sbjct: 124 EKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGM-VKFYRDPVTKQHIPYREKKNLS--G 180
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
+A +M+ +N +G E S +R DL +LG V L G P+ G
Sbjct: 181 TARYMS---INTHLGREQS---RRDDLEALGHVFMYFLRGSLPWQG 220
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 125 KRIAHRDLKPENILCVHPDQLSP--VKLCDFDLGSG-IKFNTSVHSPLATPLLLTPVGSA 181
K + +RD+KPEN L P + + + DF L I T H P LT G+A
Sbjct: 145 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLT--GTA 202
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
+M+ +N +G E S +R DL +LG + L G P+ G
Sbjct: 203 RYMS---INTHLGKEQS---RRDDLEALGHMFMYFLRGSLPWQG 240
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 252 QGIAHRDLKPENILCVHPDQLSP--VKLCDFDLGSG-IKFNTSVHSPLATPLLLTPVGSA 308
+ + +RD+KPEN L P + + + DF L I T H P LT G+A
Sbjct: 145 KNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPYREHKSLT--GTA 202
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
+M+ +N +G E S +R DL +LG + L G P+ G
Sbjct: 203 RYMS---INTHLGKEQS---RRDDLEALGHMFMYFLRGSLPWQG 240
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 88/228 (38%), Gaps = 62/228 (27%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSV------------HSPL 296
+ GI HRDLKP N L +Q VK+CDF L I + +T++ H+
Sbjct: 147 ESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKN 203
Query: 297 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL-----------C 345
L + V + + APE++ Y K D+WS G + LL
Sbjct: 204 LKKQLTSHVVTRWYRAPELILL-----QENYTKSIDIWSTGCIFAELLNMLQSHINDPTN 258
Query: 346 GYPPFYG-NCGEDCGWQRGETCHACQ-----EILFHSIQQGHYD---------------- 383
+P F G +C + + H I+F+ I D
Sbjct: 259 RFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPEVIKYIKL 318
Query: 384 FP-------EGEWSTISDEAKDLIRRLLVKDARKRLSAASVLKHPWIS 424
FP + ++ +ISD+ +L+ +L + KR++ L HP++
Sbjct: 319 FPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLK 366
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 22/113 (19%)
Query: 119 ENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSV----------- 165
EN I HRDLKP N L +Q VK+CDF L I + +T++
Sbjct: 142 ENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPG 198
Query: 166 -HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 217
H+ L + V + + APE++ Y K D+WS G + LL
Sbjct: 199 PHNKNLKKQLTSHVVTRWYRAPELILL-----QENYTKSIDIWSTGCIFAELL 246
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 74/184 (40%), Gaps = 27/184 (14%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+ + HRDLKP+N+L +L KL DF L +S L P
Sbjct: 120 RNVLHRDLKPQNLLINRNGEL---KLADFGLARAFGIPVRCYSAEVVTLWYRP------- 169
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILL-CGYPPFYGNCGEDCGWQRGETCHACQ 370
P+++ A Y D+WS G + L P F GN +D +
Sbjct: 170 -PDVLFG-----AKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPT 223
Query: 371 EILFHSIQQ--GHYDFPEGEWST--------ISDEAKDLIRRLLVKDARKRLSAASVLKH 420
E + S+ + + +P +T ++ +DL++ LL + +R+SA L+H
Sbjct: 224 EEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQH 283
Query: 421 PWIS 424
P+ S
Sbjct: 284 PYFS 287
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 17/107 (15%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
+ + HRDLKP+N+L +L KL DF L +S L P
Sbjct: 120 RNVLHRDLKPQNLLINRNGEL---KLADFGLARAFGIPVRCYSAEVVTLWYRP------- 169
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILL-CGYPPFYGNCGED 230
P+++ A Y D+WS G + L P F GN +D
Sbjct: 170 -PDVLFG-----AKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDD 210
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
KR HRD+ N+L D VKL DF L ++ +T + P+ ++M
Sbjct: 130 KRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTXXKASKGK----LPI---KWM 179
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGED 230
APE +N AS D+W GV ++ IL+ G PF G D
Sbjct: 180 APESINFRRFTSAS------DVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 17/108 (15%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
KR HRD+ N+L D VKL DF L ++ +T + P+ ++M
Sbjct: 510 KRFVHRDIAARNVLVSATD---CVKLGDFGLSRYMEDSTYYKASKGK----LPI---KWM 559
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDC 231
APE +N AS D+W GV ++ IL+ G PF G D
Sbjct: 560 APESINFRRFTSAS------DVWMFGVCMWEILMHGVKPFQGVKNNDV 601
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 48/108 (44%), Gaps = 17/108 (15%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
KR HRD+ N+L D VKL DF L ++ +T + P+ ++M
Sbjct: 510 KRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGK----LPI---KWM 559
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDC 231
APE +N AS D+W GV ++ IL+ G PF G D
Sbjct: 560 APESINFRRFTSAS------DVWMFGVCMWEILMHGVKPFQGVKNNDV 601
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 125 KRIAHRDLKPENILCVHP--DQLSPVKLCDFDLGSG-IKFNTSVHSPLATPLLLTPVGSA 181
K + +RD+KPEN L P + + + DF L I T H P LT G+A
Sbjct: 119 KSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREHKSLT--GTA 176
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
+M+ +N +G E S +R DL +LG + L G P+ G
Sbjct: 177 RYMS---INTHLGKEQS---RRDDLEALGHMFMYFLRGSLPWQG 214
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 49/104 (47%), Gaps = 11/104 (10%)
Query: 252 QGIAHRDLKPENILCVHP--DQLSPVKLCDFDLGSG-IKFNTSVHSPLATPLLLTPVGSA 308
+ + +RD+KPEN L P + + + DF L I T H P LT G+A
Sbjct: 119 KSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLAKEYIDPETKKHIPYREHKSLT--GTA 176
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
+M+ +N +G E S +R DL +LG + L G P+ G
Sbjct: 177 RYMS---INTHLGKEQS---RRDDLEALGHMFMYFLRGSLPWQG 214
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 13/100 (13%)
Query: 127 IAHRDLKPENILCV-HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG-SAEFM 184
+ HRDLKP NIL + + VK+ D +G FN+ + PLA L PV + +
Sbjct: 149 VLHRDLKPANILVMGEGPERGRVKIAD--MGFARLFNSPL-KPLAD---LDPVVVTFWYR 202
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 224
APE++ +G A Y K D+W++G + LL P F+
Sbjct: 203 APELL---LG--ARHYTKAIDIWAIGCIFAELLTSEPIFH 237
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 52/100 (52%), Gaps = 13/100 (13%)
Query: 254 IAHRDLKPENILCV-HPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG-SAEFM 311
+ HRDLKP NIL + + VK+ D +G FN+ + PLA L PV + +
Sbjct: 149 VLHRDLKPANILVMGEGPERGRVKIAD--MGFARLFNSPL-KPLAD---LDPVVVTFWYR 202
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFY 351
APE++ +G A Y K D+W++G + LL P F+
Sbjct: 203 APELL---LG--ARHYTKAIDIWAIGCIFAELLTSEPIFH 237
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
KR HRD+ N+L D VKL DF L ++ +T + P+ ++M
Sbjct: 132 KRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGK----LPI---KWM 181
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGED 230
APE +N AS D+W GV ++ IL+ G PF G D
Sbjct: 182 APESINFRRFTSAS------DVWMFGVCMWEILMHGVKPFQGVKNND 222
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
KR HRD+ N+L D VKL DF L ++ +T + P+ ++M
Sbjct: 133 KRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGK----LPI---KWM 182
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGED 230
APE +N AS D+W GV ++ IL+ G PF G D
Sbjct: 183 APESINFRRFTSAS------DVWMFGVCMWEILMHGVKPFQGVKNND 223
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
KR HRD+ N+L D VKL DF L ++ +T + P+ ++M
Sbjct: 130 KRFVHRDIAARNVLVSATD---CVKLGDFGLSRYMEDSTYYKASKGK----LPI---KWM 179
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGED 230
APE +N AS D+W GV ++ IL+ G PF G D
Sbjct: 180 APESINFRRFTSAS------DVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
KR HRD+ N+L D VKL DF L ++ +T + P+ ++M
Sbjct: 127 KRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGK----LPI---KWM 176
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGED 230
APE +N AS D+W GV ++ IL+ G PF G D
Sbjct: 177 APESINFRRFTSAS------DVWMFGVCMWEILMHGVKPFQGVKNND 217
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
KR HRD+ N+L D VKL DF L ++ +T + P+ ++M
Sbjct: 135 KRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGK----LPI---KWM 184
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGED 230
APE +N AS D+W GV ++ IL+ G PF G D
Sbjct: 185 APESINFRRFTSAS------DVWMFGVCMWEILMHGVKPFQGVKNND 225
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
KR HRD+ N+L D VKL DF L ++ +T + P+ ++M
Sbjct: 130 KRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGK----LPI---KWM 179
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGED 230
APE +N AS D+W GV ++ IL+ G PF G D
Sbjct: 180 APESINFRRFTSAS------DVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
KR HRD+ N+L D VKL DF L ++ +T + P+ ++M
Sbjct: 130 KRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGK----LPI---KWM 179
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGED 230
APE +N AS D+W GV ++ IL+ G PF G D
Sbjct: 180 APESINFRRFTSAS------DVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
KR HRD+ N+L D VKL DF L ++ +T + P+ ++M
Sbjct: 158 KRFVHRDIAARNVLVSSND---CVKLGDFGLSRYMEDSTYYKASKGK----LPI---KWM 207
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGED 230
APE +N AS D+W GV ++ IL+ G PF G D
Sbjct: 208 APESINFRRFTSAS------DVWMFGVCMWEILMHGVKPFQGVKNND 248
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK-FNTSVHSPLATPLLLTPVGSAEF 183
K HRD+KP+N L + + V + DF L + T H P LT G+A +
Sbjct: 122 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLT--GTARY 179
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
+ +N +G E S +R DL SLG V+ G P+ G
Sbjct: 180 AS---INTHLGIEQS---RRDDLESLGYVLMYFNLGSLPWQG 215
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK-FNTSVHSPLATPLLLTPVGSAEF 310
+ HRD+KP+N L + + V + DF L + T H P LT G+A +
Sbjct: 122 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLT--GTARY 179
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
+ +N +G E S +R DL SLG V+ G P+ G
Sbjct: 180 AS---INTHLGIEQS---RRDDLESLGYVLMYFNLGSLPWQG 215
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 87/233 (37%), Gaps = 70/233 (30%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNILTELEYAVKII------DKLPGHSRSRVFKEVETFH 100
D YR + LG+G Y V ++ +T A+K I + +PG + +EV
Sbjct: 34 DRYR-RITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTA----IREVSLLK 88
Query: 101 HCQGHPNIIQL-------------LEYYEDD--------------------------ENH 121
Q H NII+L EY E+D N
Sbjct: 89 ELQ-HRNIIELKSVIHHNHRLHLIFEYAENDLKKYMDKNPDVSMRVIKSFLYQLINGVNF 147
Query: 122 ERHKRIAHRDLKPENILCVHPD-QLSPV-KLCDFDLGS--GIKFNTSVHSPLATPLLLTP 177
+R HRDLKP+N+L D +PV K+ DF L GI H
Sbjct: 148 CHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHE---------- 197
Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGED 230
+ + + PEI+ +G + Y D+WS+ + +L P F G+ D
Sbjct: 198 IITLWYRPPEIL---LG--SRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEID 245
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 74/188 (39%), Gaps = 38/188 (20%)
Query: 256 HRDLKPENILCVHPD-QLSPV-KLCDFDLGS--GIKFNTSVHSPLATPLLLTPVGSAEFM 311
HRDLKP+N+L D +PV K+ DF L GI H + + +
Sbjct: 155 HRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHE----------IITLWYR 204
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQE 371
PEI+ +G + Y D+WS+ + +L P F G+ D ++ E +
Sbjct: 205 PPEIL---LG--SRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDD 259
Query: 372 ILFHSIQQGHYDFPEGEWSTISDEAKDLIRRL---------------LVKDARKRLSAAS 416
+ + P+ + S K L R L L D KR+SA +
Sbjct: 260 TTWPGVTA----LPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKN 315
Query: 417 VLKHPWIS 424
L+HP+ S
Sbjct: 316 ALEHPYFS 323
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK-FNTSVHSPLATPLLLTPVGSAEF 183
K HRD+KP+N L + + V + DF L + T H P LT G+A +
Sbjct: 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLT--GTARY 181
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
+ +N +G E S +R DL SLG V+ G P+ G
Sbjct: 182 AS---INTHLGIEQS---RRDDLESLGYVLMYFNLGSLPWQG 217
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK-FNTSVHSPLATPLLLTPVGSAEF 310
+ HRD+KP+N L + + V + DF L + T H P LT G+A +
Sbjct: 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLT--GTARY 181
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
+ +N +G E S +R DL SLG V+ G P+ G
Sbjct: 182 AS---INTHLGIEQS---RRDDLESLGYVLMYFNLGSLPWQG 217
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK-FNTSVHSPLATPLLLTPVGSAEF 183
K HRD+KP+N L + + V + DF L + T H P LT G+A +
Sbjct: 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLT--GTARY 181
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
+ +N +G E S +R DL SLG V+ G P+ G
Sbjct: 182 AS---INTHLGIEQS---RRDDLESLGYVLMYFNLGSLPWQG 217
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 9/102 (8%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK-FNTSVHSPLATPLLLTPVGSAEF 310
+ HRD+KP+N L + + V + DF L + T H P LT G+A +
Sbjct: 124 KNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENKNLT--GTARY 181
Query: 311 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
+ +N +G E S +R DL SLG V+ G P+ G
Sbjct: 182 AS---INTHLGIEQS---RRDDLESLGYVLMYFNLGSLPWQG 217
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 15/126 (11%)
Query: 107 NIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 166
NII+L+ + HRDL N+L V K+ DF L ++ + + +
Sbjct: 470 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENYY 526
Query: 167 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 225
A PV ++ APE +N + + + D+WS GV+++ G P+ G
Sbjct: 527 K--AQTHGKWPV---KWYAPECINYYK------FSSKSDVWSFGVLMWEAFSYGQKPYRG 575
Query: 226 NCGEDC 231
G +
Sbjct: 576 MKGSEV 581
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 15/126 (11%)
Query: 107 NIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 166
NII+L+ + HRDL N+L V K+ DF L ++ + + +
Sbjct: 471 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENYY 527
Query: 167 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 225
A PV ++ APE +N + + + D+WS GV+++ G P+ G
Sbjct: 528 K--AQTHGKWPV---KWYAPECINYYK------FSSKSDVWSFGVLMWEAFSYGQKPYRG 576
Query: 226 NCGEDC 231
G +
Sbjct: 577 MKGSEV 582
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 49/109 (44%), Gaps = 13/109 (11%)
Query: 120 NHERHKRIAHRDLKPENILCVHPD-QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 178
N+ R + H DLKPENIL P + S + + G I+ ++ +T + L
Sbjct: 151 NYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ----IYRTKSTGIKLIDF 206
Query: 179 GSAEFMAP---EIVNA--FMGPEAS---GYDKRCDLWSLGVVVYILLCG 219
G A F + I+N + PE G+D D+WS G V+ L G
Sbjct: 207 GCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 13/105 (12%)
Query: 251 QQGIAHRDLKPENILCVHPD-QLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 309
+ + H DLKPENIL P + S + + G I+ ++ +T + L G A
Sbjct: 155 KMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQ----IYRTKSTGIKLIDFGCAT 210
Query: 310 FMAP---EIVNA--FMGPEAS---GYDKRCDLWSLGVVVYILLCG 346
F + I+N + PE G+D D+WS G V+ L G
Sbjct: 211 FKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTG 255
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 10/91 (10%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
I+HRD+K +N+L + + C D G +KF + VG+ +MA
Sbjct: 151 AISHRDIKSKNVLLK-----NNLTACIADFGLALKFEAGKSAGDTH----GQVGTRRYMA 201
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYIL 343
PE++ + + + R D++++G+V++ L
Sbjct: 202 PEVLEGAINFQRDAF-LRIDMYAMGLVLWEL 231
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 45/90 (50%), Gaps = 10/90 (11%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I+HRD+K +N+L + + C D G +KF + VG+ +MAP
Sbjct: 152 ISHRDIKSKNVLLK-----NNLTACIADFGLALKFEAGKSAGDTH----GQVGTRRYMAP 202
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYIL 216
E++ + + + R D++++G+V++ L
Sbjct: 203 EVLEGAINFQRDAF-LRIDMYAMGLVLWEL 231
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 47/102 (46%), Gaps = 16/102 (15%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
++ HRDL NIL + + VK+CDF L I N T L L ++M
Sbjct: 218 RKCIHRDLAARNILL---SENNVVKICDFGLARDIYKNPDYVRKGDTRLPL------KWM 268
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 225
APE + + Y + D+WS GV+++ I G P+ G
Sbjct: 269 APESIFDKI------YSTKSDVWSYGVLLWEIFSLGGSPYPG 304
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 16/98 (16%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
HRDL NIL + + VK+CDF L I N T L L ++MAPE
Sbjct: 222 HRDLAARNILL---SENNVVKICDFGLARDIYKNPDYVRKGDTRLPL------KWMAPES 272
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 352
+ + Y + D+WS GV+++ I G P+ G
Sbjct: 273 IFDKI------YSTKSDVWSYGVLLWEIFSLGGSPYPG 304
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 182
K+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 151 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEXXSVHNKTGAKL---PV---K 201
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 223
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 202 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 237
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 309
+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 151 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEXXSVHNKTGAKL---PV---K 201
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 350
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 202 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 24/150 (16%)
Query: 210 GVVVYILLCGYPPFYGNCGEDCGWQRGETCHACQEILFHSIQQGIA-------------- 255
G + Y+L+ Y P G+ + + +C+ L HS+ +G+A
Sbjct: 83 GRMEYLLVMEYYP-NGSLXKYLSLHTSDWVSSCR--LAHSVTRGLAYLHTELPRGDHYKP 139
Query: 256 ---HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
HRDL N+L + + DF L + N V ++ VG+ +MA
Sbjct: 140 AISHRDLNSRNVLVKND---GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMA 196
Query: 313 PEIVNAFMG-PEASGYDKRCDLWSLGVVVY 341
PE++ + + K+ D+++LG++ +
Sbjct: 197 PEVLEGAVNLRDXESALKQVDMYALGLIYW 226
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
I+HRDL N+L + + DF L + N V ++ VG+ +MAP
Sbjct: 141 ISHRDLNSRNVLVKND---GTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAP 197
Query: 187 EIVNAFMG-PEASGYDKRCDLWSLGVVVY 214
E++ + + K+ D+++LG++ +
Sbjct: 198 EVLEGAVNLRDXESALKQVDMYALGLIYW 226
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 21/116 (18%)
Query: 229 EDCGWQRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKF 288
ED W RGE + IAHRD K +N+L L+ V L DF G ++F
Sbjct: 130 EDVPWCRGE-----------GHKPSIAHRDFKSKNVLL--KSDLTAV-LADF--GLAVRF 173
Query: 289 NTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 344
P T VG+ +MAPE++ + + + R D++++G+V++ L+
Sbjct: 174 EPG-KPPGDTH---GQVGTRRYMAPEVLEGAINFQRDAF-LRIDMYAMGLVLWELV 224
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 122 ERHK-RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGS 180
E HK IAHRD K +N+L L+ V L DF G ++F P T VG+
Sbjct: 138 EGHKPSIAHRDFKSKNVLL--KSDLTAV-LADF--GLAVRFEPG-KPPGDTH---GQVGT 188
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 217
+MAPE++ + + + R D++++G+V++ L+
Sbjct: 189 RRYMAPEVLEGAINFQRDAF-LRIDMYAMGLVLWELV 224
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 75/185 (40%), Gaps = 27/185 (14%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMA 312
+ HRDLKP N+ D + +K+ DF L + + S L+ L+ + + +
Sbjct: 140 NVLHRDLKPANLFINTEDLV--LKIGDFGLARIMDPHYSHKGHLSEGLV-----TKWYRS 192
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQ----------- 361
P ++ + P + Y K D+W+ G + +L G F G E Q
Sbjct: 193 PRLL---LSP--NNYTKAIDMWAAGCIFAEMLTGKTLFAG-AHELEQMQLILESIPVVHE 246
Query: 362 --RGETCHACQEILFHSIQQGHYDFPEGEWSTISDEAKDLIRRLLVKDARKRLSAASVLK 419
R E + + + + H + IS EA D + ++L RL+A L
Sbjct: 247 EDRQELLSVIPVYIRNDMTEPHKPLTQ-LLPGISREAVDFLEQILTFSPMDRLTAEEALS 305
Query: 420 HPWIS 424
HP++S
Sbjct: 306 HPYMS 310
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAP 186
+ HRDLKP N+ D + +K+ DF L + + S L+ L+ + + +P
Sbjct: 141 VLHRDLKPANLFINTEDLV--LKIGDFGLARIMDPHYSHKGHLSEGLV-----TKWYRSP 193
Query: 187 EIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
++ + P + Y K D+W+ G + +L G F G
Sbjct: 194 RLL---LSP--NNYTKAIDMWAAGCIFAEMLTGKTLFAG 227
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHSPLATPLLLTPVGSA 181
KR HRDL NIL + ++ VK+ DF L + K V P +P+
Sbjct: 164 KRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIF------- 213
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
+ APE + S + D+WS GVV+Y L
Sbjct: 214 -WYAPESLTE------SKFSVASDVWSFGVVLYELFT 243
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHS 294
T C+ + + ++ I HRDL NIL + ++ VK+ DF L + K V
Sbjct: 151 TSQICKGMEYLGTKRYI-HRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKE 206
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
P +P+ + APE + S + D+WS GVV+Y L
Sbjct: 207 PGESPIF--------WYAPESLTE------SKFSVASDVWSFGVVLYELFT 243
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHSPLATPLLLTPVGSA 181
KR HRDL NIL + ++ VK+ DF L + K V P +P+
Sbjct: 140 KRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIF------- 189
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
+ APE + S + D+WS GVV+Y L
Sbjct: 190 -WYAPESLTE------SKFSVASDVWSFGVVLYELFT 219
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHS 294
T C+ + + ++ I HRDL NIL + ++ VK+ DF L + K V
Sbjct: 127 TSQICKGMEYLGTKRYI-HRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKE 182
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
P +P+ + APE + S + D+WS GVV+Y L
Sbjct: 183 PGESPIF--------WYAPESLTE------SKFSVASDVWSFGVVLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHSPLATPLLLTPVGSA 181
KR HRDL NIL + ++ VK+ DF L + K V P +P+
Sbjct: 138 KRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIF------- 187
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
+ APE + S + D+WS GVV+Y L
Sbjct: 188 -WYAPESLTE------SKFSVASDVWSFGVVLYELFT 217
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHS 294
T C+ + + ++ I HRDL NIL + ++ VK+ DF L + K V
Sbjct: 125 TSQICKGMEYLGTKRYI-HRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKE 180
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
P +P+ + APE + S + D+WS GVV+Y L
Sbjct: 181 PGESPIF--------WYAPESLTE------SKFSVASDVWSFGVVLYELFT 217
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 15/126 (11%)
Query: 107 NIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 166
NII+L+ + HRDL N+L V K+ DF L ++ + + +
Sbjct: 106 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENYY 162
Query: 167 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 225
A PV ++ APE +N + + + D+WS GV+++ G P+ G
Sbjct: 163 K--AQTHGKWPV---KWYAPECINYY------KFSSKSDVWSFGVLMWEAFSYGQKPYRG 211
Query: 226 NCGEDC 231
G +
Sbjct: 212 MKGSEV 217
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 125 KRIAHRDLKPENILCVHPDQLSP--VKLCDFDLGSG-IKFNTSVHSPLATPLLLTPVGSA 181
K + +RD+KPEN L + + DF L I T H P LT G+A
Sbjct: 116 KNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLT--GTA 173
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 225
+M+ +N +G E S +R DL +LG + L G P+ G
Sbjct: 174 RYMS---INTHLGKEQS---RRDDLEALGHMFMYFLRGSLPWQG 211
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 252 QGIAHRDLKPENILCVHPDQLSP--VKLCDFDLGSG-IKFNTSVHSPLATPLLLTPVGSA 308
+ + +RD+KPEN L + + DF L I T H P LT G+A
Sbjct: 116 KNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAKEYIDPETKKHIPYREHKSLT--GTA 173
Query: 309 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYG 352
+M+ +N +G E S +R DL +LG + L G P+ G
Sbjct: 174 RYMS---INTHLGKEQS---RRDDLEALGHMFMYFLRGSLPWQG 211
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHSPLATPLLLTPVGSA 181
KR HRDL NIL + ++ VK+ DF L + K V P +P+
Sbjct: 136 KRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIF------- 185
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
+ APE + S + D+WS GVV+Y L
Sbjct: 186 -WYAPESLTE------SKFSVASDVWSFGVVLYELFT 215
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHS 294
T C+ + + ++ I HRDL NIL + ++ VK+ DF L + K V
Sbjct: 123 TSQICKGMEYLGTKRYI-HRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKE 178
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
P +P+ + APE + S + D+WS GVV+Y L
Sbjct: 179 PGESPIF--------WYAPESLTE------SKFSVASDVWSFGVVLYELFT 215
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHSPLATPLLLTPVGSA 181
KR HRDL NIL + ++ VK+ DF L + K V P +P+
Sbjct: 136 KRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIF------- 185
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
+ APE + S + D+WS GVV+Y L
Sbjct: 186 -WYAPESLTE------SKFSVASDVWSFGVVLYELFT 215
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHS 294
T C+ + + ++ I HRDL NIL + ++ VK+ DF L + K V
Sbjct: 123 TSQICKGMEYLGTKRYI-HRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKE 178
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
P +P+ + APE + S + D+WS GVV+Y L
Sbjct: 179 PGESPIF--------WYAPESLTE------SKFSVASDVWSFGVVLYELFT 215
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHSPLATPLLLTPVGSA 181
KR HRDL NIL + ++ VK+ DF L + K V P +P+
Sbjct: 139 KRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIF------- 188
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
+ APE + S + D+WS GVV+Y L
Sbjct: 189 -WYAPESLTE------SKFSVASDVWSFGVVLYELFT 218
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHS 294
T C+ + + ++ I HRDL NIL + ++ VK+ DF L + K V
Sbjct: 126 TSQICKGMEYLGTKRYI-HRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKE 181
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
P +P+ + APE + S + D+WS GVV+Y L
Sbjct: 182 PGESPIF--------WYAPESLTE------SKFSVASDVWSFGVVLYELFT 218
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHSPLATPLLLTPVGSA 181
KR HRDL NIL + ++ VK+ DF L + K V P +P+
Sbjct: 136 KRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIF------- 185
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
+ APE + S + D+WS GVV+Y L
Sbjct: 186 -WYAPESLTE------SKFSVASDVWSFGVVLYELFT 215
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHS 294
T C+ + + ++ I HRDL NIL + ++ VK+ DF L + K V
Sbjct: 123 TSQICKGMEYLGTKRYI-HRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKE 178
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
P +P+ + APE + S + D+WS GVV+Y L
Sbjct: 179 PGESPIF--------WYAPESLTE------SKFSVASDVWSFGVVLYELFT 215
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 182
K+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 153 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL---PV---K 203
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 223
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 204 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 239
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 309
+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 153 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL---PV---K 203
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 350
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 204 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 15/126 (11%)
Query: 107 NIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 166
NII+L+ + HRDL N+L V K+ DF L ++ + + +
Sbjct: 112 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENXY 168
Query: 167 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 225
A PV ++ APE +N + + + D+WS GV+++ G P+ G
Sbjct: 169 K--AQTHGKWPV---KWYAPECINYY------KFSSKSDVWSFGVLMWEAFSYGQKPYRG 217
Query: 226 NCGEDC 231
G +
Sbjct: 218 MKGSEV 223
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 182
K+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 152 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PV---K 202
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 223
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 203 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 309
+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 152 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PV---K 202
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 350
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 203 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHSPLATPLLLTPVGSA 181
KR HRDL NIL + ++ VK+ DF L + K V P +P+
Sbjct: 133 KRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIF------- 182
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
+ APE + S + D+WS GVV+Y L
Sbjct: 183 -WYAPESLTE------SKFSVASDVWSFGVVLYELFT 212
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHS 294
T C+ + + ++ I HRDL NIL + ++ VK+ DF L + K V
Sbjct: 120 TSQICKGMEYLGTKRYI-HRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKE 175
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
P +P+ + APE + S + D+WS GVV+Y L
Sbjct: 176 PGESPIF--------WYAPESLTE------SKFSVASDVWSFGVVLYELFT 212
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 182
K+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 152 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PV---K 202
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 223
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 203 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 309
+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 152 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PV---K 202
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 350
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 203 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHSPLATPLLLTPVGSA 181
KR HRDL NIL + ++ VK+ DF L + K V P +P+
Sbjct: 151 KRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIF------- 200
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
+ APE + S + D+WS GVV+Y L
Sbjct: 201 -WYAPESLTE------SKFSVASDVWSFGVVLYELFT 230
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHS 294
T C+ + + ++ I HRDL NIL + ++ VK+ DF L + K V
Sbjct: 138 TSQICKGMEYLGTKRYI-HRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKE 193
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
P +P+ + APE + S + D+WS GVV+Y L
Sbjct: 194 PGESPIF--------WYAPESLTE------SKFSVASDVWSFGVVLYELFT 230
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNI----LTELEYAVKIIDKLPGHSRSRVFKEVETFHHC 102
+L R+K +LG GA+ +V + + ++ A+KI+++ G + F +
Sbjct: 39 ELKRVK--VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMAS 96
Query: 103 QGHPNIIQLL---------------------EY-YEDDEN------------------HE 122
HP++++LL EY +E +N +
Sbjct: 97 MDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 156
Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+R+ HRDL N+L P+ VK+ DF L ++ + ++ + P+ +
Sbjct: 157 EERRLVHRDLAARNVLVKSPNH---VKITDFGLARLLEGDEKEYNADGGKM---PI---K 207
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 225
+MA E ++ + + D+WS GV ++ L+ G P+ G
Sbjct: 208 WMALECIH------YRKFTHQSDVWSYGVTIWELMTFGGKPYDG 245
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHSPLATPLLLTPVGSA 181
KR HRDL NIL + ++ VK+ DF L + K V P +P+
Sbjct: 131 KRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIF------- 180
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
+ APE + S + D+WS GVV+Y L
Sbjct: 181 -WYAPESLTE------SKFSVASDVWSFGVVLYELFT 210
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHS 294
T C+ + + ++ I HRDL NIL + ++ VK+ DF L + K V
Sbjct: 118 TSQICKGMEYLGTKRYI-HRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKE 173
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
P +P+ + APE + S + D+WS GVV+Y L
Sbjct: 174 PGESPIF--------WYAPESLTE------SKFSVASDVWSFGVVLYELFT 210
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHSPLATPLLLTPVGSA 181
KR HRDL NIL + ++ VK+ DF L + K V P +P+
Sbjct: 133 KRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIF------- 182
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
+ APE + S + D+WS GVV+Y L
Sbjct: 183 -WYAPESLTE------SKFSVASDVWSFGVVLYELFT 212
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHS 294
T C+ + + ++ I HRDL NIL + ++ VK+ DF L + K V
Sbjct: 120 TSQICKGMEYLGTKRYI-HRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKE 175
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
P +P+ + APE + S + D+WS GVV+Y L
Sbjct: 176 PGESPIF--------WYAPESLTE------SKFSVASDVWSFGVVLYELFT 212
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 182
K+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 147 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PV---K 197
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 223
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 198 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 233
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 309
+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 147 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PV---K 197
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 350
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 198 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 233
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 15/126 (11%)
Query: 107 NIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 166
NII+L+ + HRDL N+L V K+ DF L ++ + + +
Sbjct: 112 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENYY 168
Query: 167 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 225
A PV ++ APE +N + + + D+WS GV+++ G P+ G
Sbjct: 169 K--AQTHGKWPV---KWYAPECINYY------KFSSKSDVWSFGVLMWEAFSYGQKPYRG 217
Query: 226 NCGEDC 231
G +
Sbjct: 218 MKGSEV 223
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 182
K+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 150 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PV---K 200
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 223
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 201 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 309
+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 150 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PV---K 200
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 350
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 201 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 182
K+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 151 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PV---K 201
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 223
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 202 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 237
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 309
+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 151 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PV---K 201
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 350
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 202 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 237
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 182
K+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 153 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMLDKEFDSVHNKTGAKL---PV---K 203
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 223
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 204 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 239
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 309
+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 153 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMLDKEFDSVHNKTGAKL---PV---K 203
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 350
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 204 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 239
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHSPLATPLLLTPVGSA 181
KR HRDL NIL + ++ VK+ DF L + K V P +P+
Sbjct: 132 KRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIF------- 181
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
+ APE + S + D+WS GVV+Y L
Sbjct: 182 -WYAPESLTE------SKFSVASDVWSFGVVLYELFT 211
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHS 294
T C+ + + ++ I HRDL NIL + ++ VK+ DF L + K V
Sbjct: 119 TSQICKGMEYLGTKRYI-HRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKE 174
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
P +P+ + APE + S + D+WS GVV+Y L
Sbjct: 175 PGESPIF--------WYAPESLTE------SKFSVASDVWSFGVVLYELFT 211
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 85/236 (36%), Gaps = 64/236 (27%)
Query: 253 GIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH-----SPLATPLLLTPVGS 307
GI HRDLKP N L +Q VK+CDF L + + + + SP + L
Sbjct: 176 GILHRDLKPANCLV---NQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPH 232
Query: 308 AEFMAPE-----IVNAFMGPE----ASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDC 358
+ + + + + PE Y + D+WS+G + LL +
Sbjct: 233 TKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRG 292
Query: 359 GWQRGETC-------HACQEILFHSIQQGHYD---------------------------- 383
G +C A + FH+ +G+ D
Sbjct: 293 PLFPGSSCFPLSPDQKAGNDFKFHT--RGNRDQLNVIFNILGTPSEEDIEALEKEDAKRY 350
Query: 384 ---FPEGEWSTISD-------EAKDLIRRLLVKDARKRLSAASVLKHPWISTAGTA 429
FP+ E + +++ +A L++R+LV + KR++ L HP+ A
Sbjct: 351 IRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRIA 406
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 17/105 (16%)
Query: 127 IAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH-----SPLATPLLLTPVGSA 181
I HRDLKP N L +Q VK+CDF L + + + + SP + L
Sbjct: 177 ILHRDLKPANCLV---NQDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHT 233
Query: 182 EFMAPE-----IVNAFMGPE----ASGYDKRCDLWSLGVVVYILL 217
+ + + + + PE Y + D+WS+G + LL
Sbjct: 234 KNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 15/126 (11%)
Query: 107 NIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 166
NII+L+ + HRDL N+L V K+ DF L ++ + + +
Sbjct: 126 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENYY 182
Query: 167 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 225
A PV ++ APE +N + + + D+WS GV+++ G P+ G
Sbjct: 183 K--AQTHGKWPV---KWYAPECINYY------KFSSKSDVWSFGVLMWEAFSYGQKPYRG 231
Query: 226 NCGEDC 231
G +
Sbjct: 232 MKGSEV 237
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 20/96 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS---VHSPLATPLLLTPVGSA 181
+R HRDL NIL + + VK+ DF L + + V P +P+
Sbjct: 133 RRCVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF------- 182
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 217
+ APE ++ + + ++ D+WS GVV+Y L
Sbjct: 183 -WYAPESLSDNI------FSRQSDVWSFGVVLYELF 211
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 20/92 (21%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS---VHSPLATPLLLTPVGSAEFMA 312
HRDL NIL + + VK+ DF L + + V P +P+ + A
Sbjct: 137 HRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF--------WYA 185
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 344
PE ++ + + ++ D+WS GVV+Y L
Sbjct: 186 PESLSDNI------FSRQSDVWSFGVVLYELF 211
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 15/126 (11%)
Query: 107 NIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 166
NII+L+ + HRDL N+L V K+ DF L ++ + + +
Sbjct: 118 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENYY 174
Query: 167 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 225
A PV ++ APE +N + + + D+WS GV+++ G P+ G
Sbjct: 175 K--AQTHGKWPV---KWYAPECINYY------KFSSKSDVWSFGVLMWEAFSYGQKPYRG 223
Query: 226 NCGEDC 231
G +
Sbjct: 224 MKGSEV 229
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 182
K+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 150 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL---PV---K 200
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 223
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 201 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 309
+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 150 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL---PV---K 200
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 350
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 201 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 236
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 20/96 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS---VHSPLATPLLLTPVGSA 181
+R HRDL NIL + + VK+ DF L + + V P +P+
Sbjct: 146 RRCVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF------- 195
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 217
+ APE ++ + + ++ D+WS GVV+Y L
Sbjct: 196 -WYAPESLSDNI------FSRQSDVWSFGVVLYELF 224
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 20/92 (21%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS---VHSPLATPLLLTPVGSAEFMA 312
HRDL NIL + + VK+ DF L + + V P +P+ + A
Sbjct: 150 HRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF--------WYA 198
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 344
PE ++ + + ++ D+WS GVV+Y L
Sbjct: 199 PESLSDNI------FSRQSDVWSFGVVLYELF 224
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 182
K+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 157 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL---PV---K 207
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 223
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 208 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 243
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 309
+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 157 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL---PV---K 207
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 350
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 208 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 243
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHSPLATPLLLTPVGSA 181
KR HRDL NIL + ++ VK+ DF L + K V P +P+
Sbjct: 151 KRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIF------- 200
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
+ APE + S + D+WS GVV+Y L
Sbjct: 201 -WYAPESLTE------SKFSVASDVWSFGVVLYELFT 230
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHS 294
T C+ + + ++ I HRDL NIL + ++ VK+ DF L + K V
Sbjct: 138 TSQICKGMEYLGTKRYI-HRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKE 193
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
P +P+ + APE + S + D+WS GVV+Y L
Sbjct: 194 PGESPIF--------WYAPESLTE------SKFSVASDVWSFGVVLYELFT 230
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 15/126 (11%)
Query: 107 NIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 166
NII+L+ + HRDL N+L V K+ DF L ++ + + +
Sbjct: 108 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENYY 164
Query: 167 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 225
A PV ++ APE +N + + + D+WS GV+++ G P+ G
Sbjct: 165 K--AQTHGKWPV---KWYAPECINYY------KFSSKSDVWSFGVLMWEAFSYGQKPYRG 213
Query: 226 NCGEDC 231
G +
Sbjct: 214 MKGSEV 219
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 182
K+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 152 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL---PV---K 202
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 223
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 203 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 309
+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 152 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL---PV---K 202
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 350
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 203 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHSPLATPLLLTPVGSA 181
KR HRDL NIL + ++ VK+ DF L + K V P +P+
Sbjct: 137 KRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKEPGESPIF------- 186
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
+ APE + S + D+WS GVV+Y L
Sbjct: 187 -WYAPESLTE------SKFSVASDVWSFGVVLYELFT 216
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHS 294
T C+ + + ++ I HRDL NIL + ++ VK+ DF L + K V
Sbjct: 124 TSQICKGMEYLGTKRYI-HRDLATRNILVENENR---VKIGDFGLTKVLPQDKEXXKVKE 179
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
P +P+ + APE + S + D+WS GVV+Y L
Sbjct: 180 PGESPIF--------WYAPESLTE------SKFSVASDVWSFGVVLYELFT 216
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 50/121 (41%), Gaps = 21/121 (17%)
Query: 107 NIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 166
N+ +LL + K HRDL N+L V+ K+ DF L + + S +
Sbjct: 111 NVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHY---AKISDFGLSKALGADDSYY 167
Query: 167 SPLAT---PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPP 222
+ + PL ++ APE +N + R D+WS GV ++ L G P
Sbjct: 168 TARSAGKWPL--------KWYAPECIN------FRKFSSRSDVWSYGVTMWEALSYGQKP 213
Query: 223 F 223
+
Sbjct: 214 Y 214
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 21/119 (17%)
Query: 236 GETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSP 295
E H + + ++ HRDL N+L V+ K+ DF L + + S ++
Sbjct: 113 AELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHY---AKISDFGLSKALGADDSYYTA 169
Query: 296 LAT---PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 350
+ PL ++ APE +N + R D+WS GV ++ L G P+
Sbjct: 170 RSAGKWPL--------KWYAPECIN------FRKFSSRSDVWSYGVTMWEALSYGQKPY 214
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 20/96 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS---VHSPLATPLLLTPVGSA 181
+R HRDL NIL + + VK+ DF L + + V P +P+
Sbjct: 134 RRCVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF------- 183
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 217
+ APE ++ + + ++ D+WS GVV+Y L
Sbjct: 184 -WYAPESLSDNI------FSRQSDVWSFGVVLYELF 212
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 20/92 (21%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS---VHSPLATPLLLTPVGSAEFMA 312
HRDL NIL + + VK+ DF L + + V P +P+ + A
Sbjct: 138 HRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIF--------WYA 186
Query: 313 PEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 344
PE ++ + + ++ D+WS GVV+Y L
Sbjct: 187 PESLSDNI------FSRQSDVWSFGVVLYELF 212
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 92/224 (41%), Gaps = 62/224 (27%)
Query: 47 DLYRLKGEILGKGAYASVQTCVNI----LTELEYAVKIIDKLPGHSRSRVFKEVETFHHC 102
+L R+K +LG GA+ +V + + ++ A+KI+++ G + F +
Sbjct: 16 ELKRVK--VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMAS 73
Query: 103 QGHPNIIQLL---------------------EY-YEDDEN------------------HE 122
HP++++LL EY +E +N +
Sbjct: 74 MDHPHLVRLLGVCLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMYL 133
Query: 123 RHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAE 182
+R+ HRDL N+L P+ VK+ DF L ++ + ++ + P+ +
Sbjct: 134 EERRLVHRDLAARNVLVKSPNH---VKITDFGLARLLEGDEKEYNADGGKM---PI---K 184
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 225
+MA E ++ + + D+WS GV ++ L+ G P+ G
Sbjct: 185 WMALECIH------YRKFTHQSDVWSYGVTIWELMTFGGKPYDG 222
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 182
K+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 149 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PV---K 199
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 223
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 200 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 235
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 309
+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 149 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PV---K 199
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 350
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 200 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 235
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 182
K+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 152 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL---PV---K 202
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 223
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 203 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 309
+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 152 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL---PV---K 202
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 350
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 203 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 238
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 182
K+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 171 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PV---K 221
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 223
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 222 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 257
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 309
+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 171 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PV---K 221
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 350
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 222 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 257
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 15/126 (11%)
Query: 107 NIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 166
NII+L+ + HRDL N+L V K+ DF L ++ + + +
Sbjct: 128 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENYY 184
Query: 167 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 225
A PV ++ APE +N + + + D+WS GV+++ G P+ G
Sbjct: 185 K--AQTHGKWPV---KWYAPECINYY------KFSSKSDVWSFGVLMWEAFSYGQKPYRG 233
Query: 226 NCGEDC 231
G +
Sbjct: 234 MKGSEV 239
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 53/126 (42%), Gaps = 15/126 (11%)
Query: 107 NIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 166
NII+L+ + HRDL N+L V K+ DF L ++ + + +
Sbjct: 128 NIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHY---AKISDFGLSKALRADENYY 184
Query: 167 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 225
A PV ++ APE +N + + + D+WS GV+++ G P+ G
Sbjct: 185 K--AQTHGKWPV---KWYAPECINYY------KFSSKSDVWSFGVLMWEAFSYGQKPYRG 233
Query: 226 NCGEDC 231
G +
Sbjct: 234 MKGSEV 239
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 182
K+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 170 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PV---K 220
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 223
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 221 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 256
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 309
+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 170 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PV---K 220
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 350
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 221 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 256
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 182
K+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 144 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PV---K 194
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 223
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 195 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 230
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 309
+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 144 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEYYSVHNKTGAKL---PV---K 194
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 350
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 195 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 230
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 49/102 (48%), Gaps = 18/102 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 182
K+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 211 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL---PV---K 261
Query: 183 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 223
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 262 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 297
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 18/102 (17%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI--KFNTSVHSPLATPLLLTPVGSAE 309
+ HRDL N + D+ VK+ DF L + K SVH+ L PV +
Sbjct: 211 KKFVHRDLAARNCML---DEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL---PV---K 261
Query: 310 FMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 350
+MA E + + + + D+WS GV+++ L+ G PP+
Sbjct: 262 WMALESL------QTQKFTTKSDVWSFGVLLWELMTRGAPPY 297
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 20/96 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS---VHSPLATPLLLTPVGSA 181
+R HRDL NIL + + VK+ DF L + + V P +P+
Sbjct: 130 RRCVHRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIF------- 179
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 217
+ APE ++ + + ++ D+WS GVV+Y L
Sbjct: 180 -WYAPESLSDNI------FSRQSDVWSFGVVLYELF 208
Score = 33.5 bits (75), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 20/93 (21%)
Query: 255 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS---VHSPLATPLLLTPVGSAEFM 311
HRDL NIL + + VK+ DF L + + V P +P+ +
Sbjct: 133 VHRDLAARNILV---ESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIF--------WY 181
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILL 344
APE ++ + + ++ D+WS GVV+Y L
Sbjct: 182 APESLSDNI------FSRQSDVWSFGVVLYELF 208
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 45/103 (43%), Gaps = 18/103 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K HRDL NIL H K+CDF L IK N S + L PV ++M
Sbjct: 180 KNCIHRDLAARNILLTHG---RITKICDFGLARDIK-NDSNYVVKGNARL--PV---KWM 230
Query: 185 APE-IVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 225
APE I N Y D+WS G+ ++ L G P+ G
Sbjct: 231 APESIFNCV-------YTFESDVWSYGIFLWELFSLGSSPYPG 266
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 44/99 (44%), Gaps = 18/99 (18%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE- 314
HRDL NIL H K+CDF L IK N S + L PV ++MAPE
Sbjct: 184 HRDLAARNILLTHG---RITKICDFGLARDIK-NDSNYVVKGNARL--PV---KWMAPES 234
Query: 315 IVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 352
I N Y D+WS G+ ++ L G P+ G
Sbjct: 235 IFNCV-------YTFESDVWSYGIFLWELFSLGSSPYPG 266
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 45/103 (43%), Gaps = 18/103 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K HRDL NIL H K+CDF L IK N S + L PV ++M
Sbjct: 182 KNCIHRDLAARNILLTHG---RITKICDFGLARDIK-NDSNYVVKGNARL--PV---KWM 232
Query: 185 APE-IVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 225
APE I N Y D+WS G+ ++ L G P+ G
Sbjct: 233 APESIFNCV-------YTFESDVWSYGIFLWELFSLGSSPYPG 268
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 44/99 (44%), Gaps = 18/99 (18%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE- 314
HRDL NIL H K+CDF L IK N S + L PV ++MAPE
Sbjct: 186 HRDLAARNILLTHG---RITKICDFGLARDIK-NDSNYVVKGNARL--PV---KWMAPES 236
Query: 315 IVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 352
I N Y D+WS G+ ++ L G P+ G
Sbjct: 237 IFNCV-------YTFESDVWSYGIFLWELFSLGSSPYPG 268
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 35.8 bits (81), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 45/103 (43%), Gaps = 18/103 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K HRDL NIL H K+CDF L IK N S + L PV ++M
Sbjct: 164 KNCIHRDLAARNILLTHG---RITKICDFGLARDIK-NDSNYVVKGNARL--PV---KWM 214
Query: 185 APE-IVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 225
APE I N Y D+WS G+ ++ L G P+ G
Sbjct: 215 APESIFNCV-------YTFESDVWSYGIFLWELFSLGSSPYPG 250
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 44/99 (44%), Gaps = 18/99 (18%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE- 314
HRDL NIL H K+CDF L IK N S + L PV ++MAPE
Sbjct: 168 HRDLAARNILLTHG---RITKICDFGLARDIK-NDSNYVVKGNARL--PV---KWMAPES 218
Query: 315 IVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 352
I N Y D+WS G+ ++ L G P+ G
Sbjct: 219 IFNCV-------YTFESDVWSYGIFLWELFSLGSSPYPG 250
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 45/103 (43%), Gaps = 18/103 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K HRDL NIL H K+CDF L IK N S + L PV ++M
Sbjct: 187 KNCIHRDLAARNILLTHG---RITKICDFGLARDIK-NDSNYVVKGNARL--PV---KWM 237
Query: 185 APE-IVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 225
APE I N Y D+WS G+ ++ L G P+ G
Sbjct: 238 APESIFNCV-------YTFESDVWSYGIFLWELFSLGSSPYPG 273
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 44/99 (44%), Gaps = 18/99 (18%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE- 314
HRDL NIL H K+CDF L IK N S + L PV ++MAPE
Sbjct: 191 HRDLAARNILLTHG---RITKICDFGLARDIK-NDSNYVVKGNARL--PV---KWMAPES 241
Query: 315 IVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 352
I N Y D+WS G+ ++ L G P+ G
Sbjct: 242 IFNCV-------YTFESDVWSYGIFLWELFSLGSSPYPG 273
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 52/125 (41%), Gaps = 16/125 (12%)
Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS 167
+IQ+ D + K+ HRDL N + H VK+ DF + I + T+ +
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD---FTVKIGDFGMTRDI-YETAYYR 187
Query: 168 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGN 226
LL PV +MAPE + + + D+WS GVV++ I P+ G
Sbjct: 188 KGGKGLL--PV---RWMAPESL------KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL 236
Query: 227 CGEDC 231
E
Sbjct: 237 SNEQV 241
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 35.0 bits (79), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 20/110 (18%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS--VHSPLATPLLLT 303
+++ + G+ HR+L N+L P Q V++ DF + + + ++S TP+
Sbjct: 146 MYYLEEHGMVHRNLAARNVLLKSPSQ---VQVADFGVADLLPPDDKQLLYSEAKTPIKWM 202
Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 352
+ S F Y + D+WS GV V+ L+ G P+ G
Sbjct: 203 ALESIHF--------------GKYTHQSDVWSYGVTVWELMTFGAEPYAG 238
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHSPLATPLLLTPVGSA 181
KR HRDL NIL + ++ VK+ DF L + K V P +P+
Sbjct: 133 KRYIHRDLATRNILVENENR---VKIGDFGLTKVLPQDKEFFKVKEPGESPIF------- 182
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
+ APE + S + D+WS GVV+Y L
Sbjct: 183 -WYAPESLTE------SKFSVASDVWSFGVVLYELFT 212
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 238 TCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHS 294
T C+ + + ++ I HRDL NIL + ++ VK+ DF L + K V
Sbjct: 120 TSQICKGMEYLGTKRYI-HRDLATRNILVENENR---VKIGDFGLTKVLPQDKEFFKVKE 175
Query: 295 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 345
P +P+ + APE + S + D+WS GVV+Y L
Sbjct: 176 PGESPIF--------WYAPESLTE------SKFSVASDVWSFGVVLYELFT 212
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 78/210 (37%), Gaps = 57/210 (27%)
Query: 51 LKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQ 110
+ GE+LGKG + + T +K + + ++ KEV+ C HPN+++
Sbjct: 13 IHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMR-CLEHPNVLK 71
Query: 111 LLE-YYED----------------------DENHERHKRIA------------------H 129
+ Y+D D + +R++ H
Sbjct: 72 FIGVLYKDKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIH 131
Query: 130 RDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHSPLATP---LLLTPVGSAEF 183
RDL N L + V + DF L + K L P T VG+ +
Sbjct: 132 RDLNSHNCLV---RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYW 188
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVV 213
MAPE++N YD++ D++S G+V+
Sbjct: 189 MAPEMIN------GRSYDEKVDVFSFGIVL 212
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 17/100 (17%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHSPLATP---L 300
HS+ I HRDL N L + V + DF L + K L P
Sbjct: 124 LHSMN--IIHRDLNSHNCLV---RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKK 178
Query: 301 LLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVV 340
T VG+ +MAPE++N YD++ D++S G+V+
Sbjct: 179 RYTVVGNPYWMAPEMIN------GRSYDEKVDVFSFGIVL 212
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 35.0 bits (79), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 45/103 (43%), Gaps = 18/103 (17%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K HRDL NIL H K+CDF L IK N S + L PV ++M
Sbjct: 187 KNCIHRDLAARNILLTHG---RITKICDFGLARHIK-NDSNYVVKGNARL--PV---KWM 237
Query: 185 APE-IVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 225
APE I N Y D+WS G+ ++ L G P+ G
Sbjct: 238 APESIFNCV-------YTFESDVWSYGIFLWELFSLGSSPYPG 273
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 44/99 (44%), Gaps = 18/99 (18%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE- 314
HRDL NIL H K+CDF L IK N S + L PV ++MAPE
Sbjct: 191 HRDLAARNILLTHG---RITKICDFGLARHIK-NDSNYVVKGNARL--PV---KWMAPES 241
Query: 315 IVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 352
I N Y D+WS G+ ++ L G P+ G
Sbjct: 242 IFNCV-------YTFESDVWSYGIFLWELFSLGSSPYPG 273
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 20/110 (18%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS--VHSPLATPLLLT 303
+++ + G+ HR+L N+L P Q V++ DF + + + ++S TP+
Sbjct: 128 MYYLEEHGMVHRNLAARNVLLKSPSQ---VQVADFGVADLLPPDDKQLLYSEAKTPIKWM 184
Query: 304 PVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 352
+ S F Y + D+WS GV V+ L+ G P+ G
Sbjct: 185 ALESIHF--------------GKYTHQSDVWSYGVTVWELMTFGAEPYAG 220
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 51/125 (40%), Gaps = 16/125 (12%)
Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS 167
+IQ+ D + K+ HRDL N + H VK+ DF + I + T +
Sbjct: 131 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD---FTVKIGDFGMTRDI-YETDYYR 186
Query: 168 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGN 226
LL PV +MAPE + + + D+WS GVV++ I P+ G
Sbjct: 187 KGGKGLL--PV---RWMAPESLKDGV------FTTSSDMWSFGVVLWEITSLAEQPYQGL 235
Query: 227 CGEDC 231
E
Sbjct: 236 SNEQV 240
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 51/125 (40%), Gaps = 16/125 (12%)
Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS 167
+IQ+ D + K+ HRDL N + H VK+ DF + I + T +
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD---FTVKIGDFGMTRDI-YETDYYR 187
Query: 168 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGN 226
LL PV +MAPE + + + D+WS GVV++ I P+ G
Sbjct: 188 KGGKGLL--PV---RWMAPESL------KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL 236
Query: 227 CGEDC 231
E
Sbjct: 237 SNEQV 241
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 71/203 (34%), Gaps = 68/203 (33%)
Query: 56 LGKGAYASVQTCVNILTELEYA-VKIID-KLPGHSRSRVFKEVETFHHCQGHPNIIQLLE 113
+G+G++ +V ++ T +E A ++ D KL R R +E E Q HPNI++ +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQ-HPNIVRFYD 92
Query: 114 YYEDDEN----------------------------------------------HERHKRI 127
+E H R I
Sbjct: 93 SWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPI 152
Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
HRDLK +NI P VK+ D L T + A ++ TP EF APE
Sbjct: 153 IHRDLKCDNIFITGP--TGSVKIGDLGLA------TLKRASFAKAVIGTP----EFXAPE 200
Query: 188 IVNAFMGPEASGYDKRCDLWSLG 210
YD+ D+++ G
Sbjct: 201 XYE-------EKYDESVDVYAFG 216
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 42/101 (41%), Gaps = 24/101 (23%)
Query: 242 CQEIL-----FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPL 296
C++IL H+ I HRDLK +NI P VK+ D L T +
Sbjct: 135 CRQILKGLQFLHTRTPPIIHRDLKCDNIFITGP--TGSVKIGDLGLA------TLKRASF 186
Query: 297 ATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLG 337
A ++ TP EF APE YD+ D+++ G
Sbjct: 187 AKAVIGTP----EFXAPEXYE-------EKYDESVDVYAFG 216
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 42/97 (43%), Gaps = 20/97 (20%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI---KFNTSVHSPLATPLLLTPVGSA 181
KR HR+L NIL + ++ VK+ DF L + K V P +P+
Sbjct: 134 KRYIHRNLATRNILVENENR---VKIGDFGLTKVLPQDKEYYKVKEPGESPIF------- 183
Query: 182 EFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC 218
+ APE + S + D+WS GVV+Y L
Sbjct: 184 -WYAPESLTE------SKFSVASDVWSFGVVLYELFT 213
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 12/116 (10%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
+GI H+DLK +N+ + V + DF L S + + + L G +
Sbjct: 149 KGILHKDLKSKNVFYDN----GKVVITDFGLFS---ISGVLQAGRREDKLRIQNGWLCHL 201
Query: 312 APEIVNAFMGPEASG----YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 363
APEI+ + P+ + K D+++LG + Y L PF E WQ G
Sbjct: 202 APEIIRQ-LSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMG 256
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 48/116 (41%), Gaps = 12/116 (10%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K I H+DLK +N+ + V + DF L S + + + L G +
Sbjct: 149 KGILHKDLKSKNVFYDN----GKVVITDFGLFS---ISGVLQAGRREDKLRIQNGWLCHL 201
Query: 185 APEIVNAFMGPEASG----YDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRG 236
APEI+ + P+ + K D+++LG + Y L PF E WQ G
Sbjct: 202 APEIIRQ-LSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMG 256
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 21/121 (17%)
Query: 107 NIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 166
N+ +LL + K HR+L N+L V+ K+ DF L + + S +
Sbjct: 437 NVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHY---AKISDFGLSKALGADDSYY 493
Query: 167 SPLAT---PLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPP 222
+ + PL ++ APE +N + R D+WS GV ++ L G P
Sbjct: 494 TARSAGKWPL--------KWYAPECIN------FRKFSSRSDVWSYGVTMWEALSYGQKP 539
Query: 223 F 223
+
Sbjct: 540 Y 540
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 15/113 (13%)
Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
QR E C L + + I HRD+K NIL D+ K+ DF + K T +
Sbjct: 140 QRLEICIGAARGLHYLHTRAIIHRDVKSINILL---DENFVPKITDFGIS---KKGTELD 193
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG 346
T L G+ ++ PE F+ + ++ D++S GVV++ +LC
Sbjct: 194 Q---THLXXVVKGTLGYIDPEY---FIKGRLT---EKSDVYSFGVVLFEVLCA 237
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 16/125 (12%)
Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS 167
+IQ+ D + K+ HR+L N + H VK+ DF + I + T +
Sbjct: 133 MIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHD---FTVKIGDFGMTRDI-YETDYYR 188
Query: 168 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGN 226
LL PV +MAPE + + + D+WS GVV++ I P+ G
Sbjct: 189 KGGKGLL--PV---RWMAPESL------KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL 237
Query: 227 CGEDC 231
E
Sbjct: 238 SNEQV 242
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 51/125 (40%), Gaps = 16/125 (12%)
Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS 167
+IQ+ D + K+ HR+L N + H VK+ DF + I + T +
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHD---FTVKIGDFGMTRDI-YETDYYR 187
Query: 168 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGN 226
LL PV +MAPE + + + D+WS GVV++ I P+ G
Sbjct: 188 KGGKGLL--PV---RWMAPESL------KDGVFTTSSDMWSFGVVLWEITSLAEQPYQGL 236
Query: 227 CGEDC 231
E
Sbjct: 237 SNEQV 241
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 46/109 (42%), Gaps = 17/109 (15%)
Query: 124 HKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEF 183
K HRDL+ N+L + K+ DF L I+ N A P+ ++
Sbjct: 128 RKNYIHRDLRAANVLV---SESLMCKIADFGLARVIEDNEYTAREGAK----FPI---KW 177
Query: 184 MAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDC 231
APE +N + + D+WS G+++Y I+ G P+ G D
Sbjct: 178 TAPEAIN------FGCFTIKSDVWSFGILLYEIVTYGKIPYPGRTNADV 220
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 25/107 (23%)
Query: 247 FHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVG 306
HSI G+ + DLKPENI+ L+ +L DLG+ + N+ + G
Sbjct: 198 LHSI--GLVYNDLKPENIM------LTEEQLKLIDLGAVSRINSFGYL----------YG 239
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGN 353
+ F APEIV GP + D++++G + L P G
Sbjct: 240 TPGFQAPEIVRT--GPTVA-----TDIYTVGRTLAALTLDLPTRNGR 279
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
+ENH HRD+ N L P K+ DF + I + S + +L P
Sbjct: 184 EENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--P 235
Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 223
V ++M PE AFM + + D WS GV+++ I GY P+
Sbjct: 236 V---KWMPPE---AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 273
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
HRD+ N L P K+ DF + I + S + +L PV ++M PE
Sbjct: 190 HRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--PV---KWMPPE- 242
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 350
AFM + + D WS GV+++ I GY P+
Sbjct: 243 --AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 273
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
+ENH HRD+ N L P K+ DF + I + S + +L P
Sbjct: 158 EENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDI-YRASYYRKGGCAML--P 209
Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 223
V ++M PE AFM + + D WS GV+++ I GY P+
Sbjct: 210 V---KWMPPE---AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
HRD+ N L P K+ DF + I + S + +L PV ++M PE
Sbjct: 164 HRDIAARNCLLTCPGPGRVAKIGDFGMAQDI-YRASYYRKGGCAML--PV---KWMPPE- 216
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 350
AFM + + D WS GV+++ I GY P+
Sbjct: 217 --AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 51/113 (45%), Gaps = 15/113 (13%)
Query: 234 QRGETCHACQEILFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVH 293
QR E C L + + I HRD+K NIL D+ K+ DF + K T +
Sbjct: 140 QRLEICIGAARGLHYLHTRAIIHRDVKSINILL---DENFVPKITDFGIS---KKGTELG 193
Query: 294 SPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCG 346
T L G+ ++ PE F+ + ++ D++S GVV++ +LC
Sbjct: 194 Q---THLXXVVKGTLGYIDPEY---FIKGRLT---EKSDVYSFGVVLFEVLCA 237
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
+ENH HRD+ N L P K+ DF + I + S + +L P
Sbjct: 158 EENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--P 209
Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 223
V ++M PE AFM + + D WS GV+++ I GY P+
Sbjct: 210 V---KWMPPE---AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
HRD+ N L P K+ DF + I + S + +L PV ++M PE
Sbjct: 164 HRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--PV---KWMPPE- 216
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 350
AFM + + D WS GV+++ I GY P+
Sbjct: 217 --AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
+ENH HRD+ N L P K+ DF + I + S + +L P
Sbjct: 164 EENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--P 215
Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 223
V ++M PE AFM + + D WS GV+++ I GY P+
Sbjct: 216 V---KWMPPE---AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 253
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
HRD+ N L P K+ DF + I + S + +L PV ++M PE
Sbjct: 170 HRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--PV---KWMPPE- 222
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 350
AFM + + D WS GV+++ I GY P+
Sbjct: 223 --AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 253
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 43/105 (40%), Gaps = 22/105 (20%)
Query: 251 QQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI----KFNTSVHSPLATPLLLTPVG 306
+Q HRDL N + D+ VK+ DF L I ++ H P+ T +
Sbjct: 142 EQKFVHRDLAARNCML---DESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALE 198
Query: 307 SAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 350
S + + + D+WS GV+++ LL G PP+
Sbjct: 199 SLQ--------------TYRFTTKSDVWSFGVLLWELLTRGAPPY 229
Score = 32.0 bits (71), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 22/104 (21%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI----KFNTSVHSPLATPLLLTPVGS 180
++ HRDL N + D+ VK+ DF L I ++ H P+ T + S
Sbjct: 143 QKFVHRDLAARNCML---DESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALES 199
Query: 181 AEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPF 223
+ + + D+WS GV+++ LL G PP+
Sbjct: 200 LQ--------------TYRFTTKSDVWSFGVLLWELLTRGAPPY 229
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 70/188 (37%), Gaps = 25/188 (13%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
L++ + I HRD+K N+L L KL DF L + ++T
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVL---KLADFGLARAFSLAKNSQPNRYXNRVVT-- 192
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
+ PE++ +G Y DLW G ++ + P GN + +
Sbjct: 193 --LWYRPPELL---LG--ERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 245
Query: 366 CHACQEILFHSIQQ----GHYDFPEGEWSTISDEAK---------DLIRRLLVKDARKRL 412
C + ++ ++ + +G+ + D K DLI +LLV D +R+
Sbjct: 246 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI 305
Query: 413 SAASVLKH 420
+ L H
Sbjct: 306 DSDDALNH 313
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 16/125 (12%)
Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS 167
+IQ+ D + K+ HRDL N + H VK+ DF + I T
Sbjct: 129 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD---FTVKIGDFGMTRDIX-ETDXXR 184
Query: 168 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGN 226
LL PV +MAPE + + + D+WS GVV++ I P+ G
Sbjct: 185 KGGKGLL--PV---RWMAPESLKDGV------FTTSSDMWSFGVVLWEITSLAEQPYQGL 233
Query: 227 CGEDC 231
E
Sbjct: 234 SNEQV 238
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 72/184 (39%), Gaps = 26/184 (14%)
Query: 49 YRLKGEILGKGAYASVQTCVNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNI 108
+ ++ I+ K + ++ C+ + + +++ + G +E +
Sbjct: 72 FLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAM 131
Query: 109 IQLLEYYED--------DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIK 160
+ LL D +ENH HRD+ N L P K+ DF + I
Sbjct: 132 LDLLHVARDIACGCQYLEENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI- 185
Query: 161 FNTSVHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCG 219
+ S + +L PV ++M PE AFM + + D WS GV+++ I G
Sbjct: 186 YRASYYRKGGCAML--PV---KWMPPE---AFM---EGIFTSKTDTWSFGVLLWEIFSLG 234
Query: 220 YPPF 223
Y P+
Sbjct: 235 YMPY 238
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
HRD+ N L P K+ DF + I + S + +L PV ++M PE
Sbjct: 155 HRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--PV---KWMPPE- 207
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 350
AFM + + D WS GV+++ I GY P+
Sbjct: 208 --AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 238
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
+ENH HRD+ N L P K+ DF + I + S + +L P
Sbjct: 158 EENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--P 209
Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 223
V ++M PE AFM + + D WS GV+++ I GY P+
Sbjct: 210 V---KWMPPE---AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
HRD+ N L P K+ DF + I + S + +L PV ++M PE
Sbjct: 164 HRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--PV---KWMPPE- 216
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 350
AFM + + D WS GV+++ I GY P+
Sbjct: 217 --AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 247
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
+ENH HRD+ N L P K+ DF + I + S + +L P
Sbjct: 172 EENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--P 223
Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 223
V ++M PE AFM + + D WS GV+++ I GY P+
Sbjct: 224 V---KWMPPE---AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
HRD+ N L P K+ DF + I + S + +L PV ++M PE
Sbjct: 178 HRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--PV---KWMPPE- 230
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 350
AFM + + D WS GV+++ I GY P+
Sbjct: 231 --AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
+ENH HRD+ N L P K+ DF + I + S + +L P
Sbjct: 174 EENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--P 225
Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 223
V ++M PE AFM + + D WS GV+++ I GY P+
Sbjct: 226 V---KWMPPE---AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 263
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
HRD+ N L P K+ DF + I + S + +L PV ++M PE
Sbjct: 180 HRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--PV---KWMPPE- 232
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 350
AFM + + D WS GV+++ I GY P+
Sbjct: 233 --AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 263
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
+ENH HRD+ N L P K+ DF + I + S + +L P
Sbjct: 172 EENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--P 223
Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 223
V ++M PE AFM + + D WS GV+++ I GY P+
Sbjct: 224 V---KWMPPE---AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
HRD+ N L P K+ DF + I + S + +L PV ++M PE
Sbjct: 178 HRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--PV---KWMPPE- 230
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 350
AFM + + D WS GV+++ I GY P+
Sbjct: 231 --AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
+ENH HRD+ N L P K+ DF + I + S + +L P
Sbjct: 157 EENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--P 208
Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 223
V ++M PE AFM + + D WS GV+++ I GY P+
Sbjct: 209 V---KWMPPE---AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 246
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
HRD+ N L P K+ DF + I + S + +L PV ++M PE
Sbjct: 163 HRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--PV---KWMPPE- 215
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 350
AFM + + D WS GV+++ I GY P+
Sbjct: 216 --AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 246
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
+ENH HRD+ N L P K+ DF + I + S + +L P
Sbjct: 157 EENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--P 208
Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 223
V ++M PE AFM + + D WS GV+++ I GY P+
Sbjct: 209 V---KWMPPE---AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 246
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
HRD+ N L P K+ DF + I + S + +L PV ++M PE
Sbjct: 163 HRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--PV---KWMPPE- 215
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 350
AFM + + D WS GV+++ I GY P+
Sbjct: 216 --AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 246
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 33/136 (24%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDL N+L + + K+ DF L I N + L PV ++MAPE
Sbjct: 180 HRDLAARNVLVTENNVM---KIADFGLARDIN-NIDYYKKTTNGRL--PV---KWMAPEA 230
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGETCHACQEILF 247
+ + Y + D+WS GV+++ I G P+ G E+ LF
Sbjct: 231 LFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------------LF 269
Query: 248 HSIQQGIAHRDLKPEN 263
+++G HR KP N
Sbjct: 270 KLLKEG--HRMDKPAN 283
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
Q HRDL N+L + + K+ DF L I N + L PV ++M
Sbjct: 176 QKCIHRDLAARNVLVTENNVM---KIADFGLARDIN-NIDYYKKTTNGRL--PV---KWM 226
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 352
APE + + Y + D+WS GV+++ I G P+ G
Sbjct: 227 APEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 70/188 (37%), Gaps = 25/188 (13%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
L++ + I HRD+K N+L L KL DF L + ++T
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVL---KLADFGLARAFSLAKNSQPNRYXNRVVT-- 192
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
+ PE++ +G Y DLW G ++ + P GN + +
Sbjct: 193 --LWYRPPELL---LGER--DYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 245
Query: 366 CHACQEILFHSIQQ----GHYDFPEGEWSTISDEAK---------DLIRRLLVKDARKRL 412
C + ++ ++ + +G+ + D K DLI +LLV D +R+
Sbjct: 246 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI 305
Query: 413 SAASVLKH 420
+ L H
Sbjct: 306 DSDDALNH 313
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 33/136 (24%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDL N+L + + K+ DF L I N + L PV ++MAPE
Sbjct: 226 HRDLAARNVLVTENNVM---KIADFGLARDIN-NIDYYKKTTNGRL--PV---KWMAPEA 276
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGETCHACQEILF 247
+ + Y + D+WS GV+++ I G P+ G E+ LF
Sbjct: 277 LFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------------LF 315
Query: 248 HSIQQGIAHRDLKPEN 263
+++G HR KP N
Sbjct: 316 KLLKEG--HRMDKPAN 329
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
Q HRDL N+L + + K+ DF L I N + L PV ++M
Sbjct: 222 QKCIHRDLAARNVLVTENNVM---KIADFGLARDIN-NIDYYKKTTNGRL--PV---KWM 272
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 352
APE + + Y + D+WS GV+++ I G P+ G
Sbjct: 273 APEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPG 308
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 16/125 (12%)
Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS 167
+IQ+ D + K+ HRDL N + H VK+ DF + I T
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD---FTVKIGDFGMTRDIX-ETDXXR 187
Query: 168 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGN 226
LL PV +MAPE + + + D+WS GVV++ I P+ G
Sbjct: 188 KGGKGLL--PV---RWMAPESLKDGV------FTTSSDMWSFGVVLWEITSLAEQPYQGL 236
Query: 227 CGEDC 231
E
Sbjct: 237 SNEQV 241
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 18/107 (16%)
Query: 118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
+ENH HRD+ N L P K+ DF + I + S + +L P
Sbjct: 172 EENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--P 223
Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 223
V ++M PE AFM + + D WS GV+++ I GY P+
Sbjct: 224 V---KWMPPE---AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 43/96 (44%), Gaps = 13/96 (13%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
HRD+ N L P K+ DF + I + S + +L PV ++M PE
Sbjct: 178 HRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRASYYRKGGCAML--PV---KWMPPE- 230
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 350
AFM + + D WS GV+++ I GY P+
Sbjct: 231 --AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 261
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 57/140 (40%), Gaps = 33/140 (23%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 184
K+ HRDL N+L + + K+ DF L I L PV ++M
Sbjct: 169 KKCIHRDLAARNVLVTEDNVM---KIADFGLARDIHHIDXXKKTTNGRL---PV---KWM 219
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGETCHACQ 243
APE + + Y + D+WS GV+++ I G P+ G E+
Sbjct: 220 APEALFDRI------YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------------- 260
Query: 244 EILFHSIQQGIAHRDLKPEN 263
LF +++G HR KP N
Sbjct: 261 --LFKLLKEG--HRMDKPSN 276
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 33/136 (24%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDL N+L + + K+ DF L I N + L PV ++MAPE
Sbjct: 180 HRDLAARNVLVTENNVM---KIADFGLARDIN-NIDYYKKTTNGRL--PV---KWMAPEA 230
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGETCHACQEILF 247
+ + Y + D+WS GV+++ I G P+ G E+ LF
Sbjct: 231 LFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------------LF 269
Query: 248 HSIQQGIAHRDLKPEN 263
+++G HR KP N
Sbjct: 270 KLLKEG--HRMDKPAN 283
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
Q HRDL N+L + + K+ DF L I N + L PV ++M
Sbjct: 176 QKCIHRDLAARNVLVTENNVM---KIADFGLARDIN-NIDYYKKTTNGRL--PV---KWM 226
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 352
APE + + Y + D+WS GV+++ I G P+ G
Sbjct: 227 APEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 33/136 (24%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDL N+L + + K+ DF L I N + L PV ++MAPE
Sbjct: 180 HRDLAARNVLVTENNVM---KIADFGLARDIN-NIDYYKKTTNGRL--PV---KWMAPEA 230
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGETCHACQEILF 247
+ + Y + D+WS GV+++ I G P+ G E+ LF
Sbjct: 231 LFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------------LF 269
Query: 248 HSIQQGIAHRDLKPEN 263
+++G HR KP N
Sbjct: 270 KLLKEG--HRMDKPAN 283
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
Q HRDL N+L + + K+ DF L I N + L PV ++M
Sbjct: 176 QKCIHRDLAARNVLVTENNVM---KIADFGLARDIN-NIDYYKKTTNGRL--PV---KWM 226
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 352
APE + + Y + D+WS GV+++ I G P+ G
Sbjct: 227 APEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 49/125 (39%), Gaps = 16/125 (12%)
Query: 108 IIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHS 167
+IQ+ D + K+ HRDL N + H VK+ DF + I T
Sbjct: 132 MIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHD---FTVKIGDFGMTRDIX-ETDXXR 187
Query: 168 PLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGN 226
LL PV +MAPE + + + D+WS GVV++ I P+ G
Sbjct: 188 KGGKGLL--PV---RWMAPESLKDGV------FTTSSDMWSFGVVLWEITSLAEQPYQGL 236
Query: 227 CGEDC 231
E
Sbjct: 237 SNEQV 241
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 70/188 (37%), Gaps = 25/188 (13%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
L++ + I HRD+K N+L L KL DF L + ++T
Sbjct: 138 LYYIHRNKILHRDMKAANVLITRDGVL---KLADFGLARAFSLAKNSQPNRYXNRVVT-- 192
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
+ PE++ +G Y DLW G ++ + P GN + +
Sbjct: 193 --LWYRPPELL---LGER--DYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 245
Query: 366 CHACQEILFHSIQQ----GHYDFPEGEWSTISDEAK---------DLIRRLLVKDARKRL 412
C + ++ ++ + +G+ + D K DLI +LLV D +R+
Sbjct: 246 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI 305
Query: 413 SAASVLKH 420
+ L H
Sbjct: 306 DSDDALNH 313
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 33/136 (24%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDL N+L + + K+ DF L I N + L PV ++MAPE
Sbjct: 180 HRDLAARNVLVTENNVM---KIADFGLARDIN-NIDYYKKTTNGRL--PV---KWMAPEA 230
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGETCHACQEILF 247
+ + Y + D+WS GV+++ I G P+ G E+ LF
Sbjct: 231 LFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------------LF 269
Query: 248 HSIQQGIAHRDLKPEN 263
+++G HR KP N
Sbjct: 270 KLLKEG--HRMDKPAN 283
Score = 32.3 bits (72), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
Q HRDL N+L + + K+ DF L I N + L PV ++M
Sbjct: 176 QKCIHRDLAARNVLVTENNVM---KIADFGLARDIN-NIDYYKKTTNGRL--PV---KWM 226
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 352
APE + + Y + D+WS GV+++ I G P+ G
Sbjct: 227 APEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 33/136 (24%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDL N+L + + K+ DF L I N + L PV ++MAPE
Sbjct: 180 HRDLAARNVLVTENNVM---KIADFGLARDIN-NIDYYKKTTNGRL--PV---KWMAPEA 230
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGETCHACQEILF 247
+ + Y + D+WS GV+++ I G P+ G E+ LF
Sbjct: 231 LFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------------LF 269
Query: 248 HSIQQGIAHRDLKPEN 263
+++G HR KP N
Sbjct: 270 KLLKEG--HRMDKPAN 283
Score = 32.0 bits (71), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
Q HRDL N+L + + K+ DF L I N + L PV ++M
Sbjct: 176 QKCIHRDLAARNVLVTENNVM---KIADFGLARDIN-NIDYYKKTTNGRL--PV---KWM 226
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 352
APE + + Y + D+WS GV+++ I G P+ G
Sbjct: 227 APEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 33/136 (24%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDL N+L + + K+ DF L I N + L PV ++MAPE
Sbjct: 169 HRDLAARNVLVTENNVM---KIADFGLARDIN-NIDYYKKTTNGRL--PV---KWMAPEA 219
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGETCHACQEILF 247
+ + Y + D+WS GV+++ I G P+ G E+ LF
Sbjct: 220 LFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------------LF 258
Query: 248 HSIQQGIAHRDLKPEN 263
+++G HR KP N
Sbjct: 259 KLLKEG--HRMDKPAN 272
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
Q HRDL N+L + + K+ DF L I N + L PV ++M
Sbjct: 165 QKCIHRDLAARNVLVTENNVM---KIADFGLARDIN-NIDYYKKTTNGRL--PV---KWM 215
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 352
APE + + Y + D+WS GV+++ I G P+ G
Sbjct: 216 APEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPG 251
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 32.3 bits (72), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 46/102 (45%), Gaps = 18/102 (17%)
Query: 126 RIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFN-TSVHSPLATPLLLTPVGSAEFM 184
R+ HRDL N+L P+ VK+ DF L + + T H+ P+ ++M
Sbjct: 139 RLVHRDLAARNVLVKSPNH---VKITDFGLARLLDIDETEYHADGGK----VPI---KWM 188
Query: 185 APEIVNAFMGPEASGYDKRCDLWSLGVVVYILLC-GYPPFYG 225
A E + + + D+WS GV V+ L+ G P+ G
Sbjct: 189 ALESI------LRRRFTHQSDVWSYGVTVWELMTFGAKPYDG 224
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 33/136 (24%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDL N+L + + K+ DF L I N + L PV ++MAPE
Sbjct: 172 HRDLAARNVLVTENNVM---KIADFGLARDIN-NIDYYKKTTNGRL--PV---KWMAPEA 222
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGETCHACQEILF 247
+ + Y + D+WS GV+++ I G P+ G E+ LF
Sbjct: 223 LFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------------LF 261
Query: 248 HSIQQGIAHRDLKPEN 263
+++G HR KP N
Sbjct: 262 KLLKEG--HRMDKPAN 275
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
Q HRDL N+L + + K+ DF L I N + L PV ++M
Sbjct: 168 QKCIHRDLAARNVLVTENNVM---KIADFGLARDIN-NIDYYKKTTNGRL--PV---KWM 218
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 352
APE + + Y + D+WS GV+++ I G P+ G
Sbjct: 219 APEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPG 254
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 33/136 (24%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDL N+L + + K+ DF L I N + L PV ++MAPE
Sbjct: 167 HRDLTARNVLVTENNVM---KIADFGLARDIN-NIDYYKKTTNGRL--PV---KWMAPEA 217
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGETCHACQEILF 247
+ + Y + D+WS GV+++ I G P+ G E+ LF
Sbjct: 218 LFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------------LF 256
Query: 248 HSIQQGIAHRDLKPEN 263
+++G HR KP N
Sbjct: 257 KLLKEG--HRMDKPAN 270
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
Q HRDL N+L + + K+ DF L I N + L PV ++M
Sbjct: 163 QKCIHRDLTARNVLVTENNVM---KIADFGLARDIN-NIDYYKKTTNGRL--PV---KWM 213
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 352
APE + + Y + D+WS GV+++ I G P+ G
Sbjct: 214 APEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPG 249
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 45/146 (30%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI------KFNTSVHSPLATPLLLTPV 178
K+ HRDL N+L + + K+ DF L I K T+ P+
Sbjct: 162 KKCIHRDLAARNVLVTEDNVM---KIADFGLARDIHHIDYYKKTTNGRLPV--------- 209
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGE 237
++MAPE + + Y + D+WS GV+++ I G P+ G E+
Sbjct: 210 ---KWMAPEALFDRI------YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 253
Query: 238 TCHACQEILFHSIQQGIAHRDLKPEN 263
LF +++G HR KP N
Sbjct: 254 --------LFKLLKEG--HRMDKPSN 269
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 45/146 (30%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI------KFNTSVHSPLATPLLLTPV 178
K+ HRDL N+L + + K+ DF L I K T+ P+
Sbjct: 169 KKCIHRDLAARNVLVTEDNVM---KIADFGLARDIHHIDYYKKTTNGRLPV--------- 216
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGE 237
++MAPE + + Y + D+WS GV+++ I G P+ G E+
Sbjct: 217 ---KWMAPEALFDRI------YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 260
Query: 238 TCHACQEILFHSIQQGIAHRDLKPEN 263
LF +++G HR KP N
Sbjct: 261 --------LFKLLKEG--HRMDKPSN 276
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 70/188 (37%), Gaps = 25/188 (13%)
Query: 246 LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPV 305
L++ + I HRD+K N+L L KL DF L + ++T
Sbjct: 137 LYYIHRNKILHRDMKAANVLITRDGVL---KLADFGLARAFSLAKNSQPNRYXNRVVT-- 191
Query: 306 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPFYGNCGEDCGWQRGET 365
+ PE++ +G Y DLW G ++ + P GN + +
Sbjct: 192 --LWYRPPELL---LGER--DYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQL 244
Query: 366 CHACQEILFHSIQQ----GHYDFPEGEWSTISDEAK---------DLIRRLLVKDARKRL 412
C + ++ ++ + +G+ + D K DLI +LLV D +R+
Sbjct: 245 CGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQRI 304
Query: 413 SAASVLKH 420
+ L H
Sbjct: 305 DSDDALNH 312
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 45/146 (30%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI------KFNTSVHSPLATPLLLTPV 178
K+ HRDL N+L + + K+ DF L I K T+ P+
Sbjct: 161 KKCIHRDLAARNVLVTEDNVM---KIADFGLARDIHHIDYYKKTTNGRLPV--------- 208
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGE 237
++MAPE + + Y + D+WS GV+++ I G P+ G E+
Sbjct: 209 ---KWMAPEALFDRI------YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 252
Query: 238 TCHACQEILFHSIQQGIAHRDLKPEN 263
LF +++G HR KP N
Sbjct: 253 --------LFKLLKEG--HRMDKPSN 268
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 45/146 (30%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI------KFNTSVHSPLATPLLLTPV 178
K+ HRDL N+L + + K+ DF L I K T+ P+
Sbjct: 158 KKCIHRDLAARNVLVTEDNVM---KIADFGLARDIHHIDYYKKTTNGRLPV--------- 205
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGE 237
++MAPE + + Y + D+WS GV+++ I G P+ G E+
Sbjct: 206 ---KWMAPEALFDRI------YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 249
Query: 238 TCHACQEILFHSIQQGIAHRDLKPEN 263
LF +++G HR KP N
Sbjct: 250 --------LFKLLKEG--HRMDKPSN 265
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 32.3 bits (72), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 45/146 (30%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI------KFNTSVHSPLATPLLLTPV 178
K+ HRDL N+L + + K+ DF L I K T+ P+
Sbjct: 169 KKCIHRDLAARNVLVTEDNVM---KIADFGLARDIHHIDYYKKTTNGRLPV--------- 216
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGE 237
++MAPE + + Y + D+WS GV+++ I G P+ G E+
Sbjct: 217 ---KWMAPEALFDRI------YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 260
Query: 238 TCHACQEILFHSIQQGIAHRDLKPEN 263
LF +++G HR KP N
Sbjct: 261 --------LFKLLKEG--HRMDKPSN 276
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 45/146 (30%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI------KFNTSVHSPLATPLLLTPV 178
K+ HRDL N+L + + K+ DF L I K T+ P+
Sbjct: 210 KKCIHRDLAARNVLVTEDNVM---KIADFGLARDIHHIDYYKKTTNGRLPV--------- 257
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGE 237
++MAPE + + Y + D+WS GV+++ I G P+ G E+
Sbjct: 258 ---KWMAPEALFDRI------YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 301
Query: 238 TCHACQEILFHSIQQGIAHRDLKPEN 263
LF +++G HR KP N
Sbjct: 302 --------LFKLLKEG--HRMDKPSN 317
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 25/124 (20%)
Query: 235 RGETCHACQEI---LFHSIQQGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTS 291
+ + H Q+I + + Q HRDL N C+ + L VK+ DF + + ++T
Sbjct: 127 QSQMLHIAQQIAAGMVYLASQHFVHRDLATRN--CLVGENLL-VKIGDFGMSRDV-YSTD 182
Query: 292 VHSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDK---RCDLWSLGVVVY-ILLCGY 347
+ +L P+ +M PE+ Y K D+WSLGVV++ I G
Sbjct: 183 YYRVGGHTML--PI------------RWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGK 228
Query: 348 PPFY 351
P+Y
Sbjct: 229 QPWY 232
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 45/146 (30%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI------KFNTSVHSPLATPLLLTPV 178
K+ HRDL N+L + + K+ DF L I K T+ P+
Sbjct: 154 KKCIHRDLAARNVLVTEDNVM---KIADFGLARDIHHIDYYKKTTNGRLPV--------- 201
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGE 237
++MAPE + + Y + D+WS GV+++ I G P+ G E+
Sbjct: 202 ---KWMAPEALFDRI------YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 245
Query: 238 TCHACQEILFHSIQQGIAHRDLKPEN 263
LF +++G HR KP N
Sbjct: 246 --------LFKLLKEG--HRMDKPSN 261
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 33/136 (24%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDL N+L + + K+ DF L I N + L PV ++MAPE
Sbjct: 180 HRDLAARNVLVTENNVM---KIADFGLARDIN-NIDYYKNTTNGRL--PV---KWMAPEA 230
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGETCHACQEILF 247
+ + Y + D+WS GV+++ I G P+ G E+ LF
Sbjct: 231 LFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------------LF 269
Query: 248 HSIQQGIAHRDLKPEN 263
+++G HR KP N
Sbjct: 270 KLLKEG--HRMDKPAN 283
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
Q HRDL N+L + + K+ DF L I N + L PV ++M
Sbjct: 176 QKCIHRDLAARNVLVTENNVM---KIADFGLARDIN-NIDYYKNTTNGRL--PV---KWM 226
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 352
APE + + Y + D+WS GV+++ I G P+ G
Sbjct: 227 APEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 33/136 (24%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDL N+L + + K+ DF L I ++ T PV ++MAPE
Sbjct: 180 HRDLAARNVLVTENNVM---KIADFGLARDI---NNIDXXKKTTNGRLPV---KWMAPEA 230
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGETCHACQEILF 247
+ + Y + D+WS GV+++ I G P+ G E+ LF
Sbjct: 231 LFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------------LF 269
Query: 248 HSIQQGIAHRDLKPEN 263
+++G HR KP N
Sbjct: 270 KLLKEG--HRMDKPAN 283
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
Q HRDL N+L + + K+ DF L I ++ T PV ++M
Sbjct: 176 QKCIHRDLAARNVLVTENNVM---KIADFGLARDI---NNIDXXKKTTNGRLPV---KWM 226
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 352
APE + + Y + D+WS GV+++ I G P+ G
Sbjct: 227 APEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 59/146 (40%), Gaps = 45/146 (30%)
Query: 125 KRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGI------KFNTSVHSPLATPLLLTPV 178
K+ HRDL N+L + + K+ DF L I K T+ P+
Sbjct: 169 KKCIHRDLAARNVLVTEDNVM---KIADFGLARDIHHIDYYKKTTNGRLPV--------- 216
Query: 179 GSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGE 237
++MAPE + + Y + D+WS GV+++ I G P+ G E+
Sbjct: 217 ---KWMAPEALFDRI------YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE------- 260
Query: 238 TCHACQEILFHSIQQGIAHRDLKPEN 263
LF +++G HR KP N
Sbjct: 261 --------LFKLLKEG--HRMDKPSN 276
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 32.0 bits (71), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 57/136 (41%), Gaps = 33/136 (24%)
Query: 129 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 188
HRDL N+L + + K+ DF L I ++ T PV ++MAPE
Sbjct: 180 HRDLAARNVLVTENNVM---KIADFGLARDI---NNIDXXKKTTNGRLPV---KWMAPEA 230
Query: 189 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYGNCGEDCGWQRGETCHACQEILF 247
+ + Y + D+WS GV+++ I G P+ G E+ LF
Sbjct: 231 LFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE---------------LF 269
Query: 248 HSIQQGIAHRDLKPEN 263
+++G HR KP N
Sbjct: 270 KLLKEG--HRMDKPAN 283
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 45/102 (44%), Gaps = 16/102 (15%)
Query: 252 QGIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFM 311
Q HRDL N+L + + K+ DF L I ++ T PV ++M
Sbjct: 176 QKCIHRDLAARNVLVTENNVM---KIADFGLARDI---NNIDXXKKTTNGRLPV---KWM 226
Query: 312 APEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFYG 352
APE + + Y + D+WS GV+++ I G P+ G
Sbjct: 227 APEALFDRV------YTHQSDVWSFGVLMWEIFTLGGSPYPG 262
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 51/127 (40%), Gaps = 17/127 (13%)
Query: 106 PNIIQLLEYYEDDENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSV 165
P +I + + K HRDL+ N+L + K+ DF L I+ N
Sbjct: 109 PKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLV---SESLMCKIADFGLARVIEDNEYT 165
Query: 166 HSPLATPLLLTPVGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPFY 224
A P+ ++ APE +N + + ++WS G+++Y I+ G P+
Sbjct: 166 AREGAK----FPI---KWTAPEAIN------FGCFTIKSNVWSFGILLYEIVTYGKIPYP 212
Query: 225 GNCGEDC 231
G D
Sbjct: 213 GRTNADV 219
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 18/107 (16%)
Query: 118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
+ENH HRD+ N L P K+ DF + I + + +L P
Sbjct: 175 EENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRAGYYRKGGCAML--P 226
Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 223
V ++M PE AFM + + D WS GV+++ I GY P+
Sbjct: 227 V---KWMPPE---AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 264
Score = 30.0 bits (66), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
HRD+ N L P K+ DF + I + + +L PV ++M PE
Sbjct: 181 HRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRAGYYRKGGCAML--PV---KWMPPE- 233
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 350
AFM + + D WS GV+++ I GY P+
Sbjct: 234 --AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 264
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 18/107 (16%)
Query: 118 DENHERHKRIAHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTP 177
+ENH HRD+ N L P K+ DF + I + + +L P
Sbjct: 198 EENH-----FIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRAGYYRKGGCAML--P 249
Query: 178 VGSAEFMAPEIVNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 223
V ++M PE AFM + + D WS GV+++ I GY P+
Sbjct: 250 V---KWMPPE---AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 287
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Query: 256 HRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPEI 315
HRD+ N L P K+ DF + I + + +L PV ++M PE
Sbjct: 204 HRDIAARNCLLTCPGPGRVAKIGDFGMARDI-YRAGYYRKGGCAML--PV---KWMPPE- 256
Query: 316 VNAFMGPEASGYDKRCDLWSLGVVVY-ILLCGYPPF 350
AFM + + D WS GV+++ I GY P+
Sbjct: 257 --AFM---EGIFTSKTDTWSFGVLLWEIFSLGYMPY 287
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 24/156 (15%)
Query: 68 VNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI 127
VNI EL L G S ++ K++ + + Q LE E + +RI
Sbjct: 125 VNIFMEL---------LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLE----YLHTRRI 171
Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
H D+K +N+L S LCDF ++ + S L + G+ MAPE
Sbjct: 172 LHGDVKADNVLLSSDG--SRAALCDFGHALCLQPDGLGKSLLTGDYI---PGTETHMAPE 226
Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+V MG D + D+WS ++ +L G P+
Sbjct: 227 VV---MGKPC---DAKVDIWSSCCMMLHMLNGCHPW 256
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 24/156 (15%)
Query: 68 VNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI 127
VNI EL L G S ++ K++ + + Q LE E + +RI
Sbjct: 139 VNIFMEL---------LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLE----YLHTRRI 185
Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
H D+K +N+L S LCDF ++ + S L + G+ MAPE
Sbjct: 186 LHGDVKADNVLLSSDG--SRAALCDFGHALCLQPDGLGKSLLTGDYI---PGTETHMAPE 240
Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+V MG D + D+WS ++ +L G P+
Sbjct: 241 VV---MGKPC---DAKVDIWSSCCMMLHMLNGCHPW 270
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 65/156 (41%), Gaps = 24/156 (15%)
Query: 68 VNILTELEYAVKIIDKLPGHSRSRVFKEVETFHHCQGHPNIIQLLEYYEDDENHERHKRI 127
VNI EL L G S ++ K++ + + Q LE E + +RI
Sbjct: 141 VNIFMEL---------LEGGSLGQLIKQMGCLPEDRALYYLGQALEGLE----YLHTRRI 187
Query: 128 AHRDLKPENILCVHPDQLSPVKLCDFDLGSGIKFNTSVHSPLATPLLLTPVGSAEFMAPE 187
H D+K +N+L S LCDF ++ + S L + G+ MAPE
Sbjct: 188 LHGDVKADNVLLSSDG--SRAALCDFGHALCLQPDGLGKSLLTGDYI---PGTETHMAPE 242
Query: 188 IVNAFMGPEASGYDKRCDLWSLGVVVYILLCGYPPF 223
+V MG D + D+WS ++ +L G P+
Sbjct: 243 VV---MGKPC---DAKVDIWSSCCMMLHMLNGCHPW 272
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.440
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,158,420
Number of Sequences: 62578
Number of extensions: 690553
Number of successful extensions: 5443
Number of sequences better than 100.0: 878
Number of HSP's better than 100.0 without gapping: 479
Number of HSP's successfully gapped in prelim test: 399
Number of HSP's that attempted gapping in prelim test: 1735
Number of HSP's gapped (non-prelim): 2374
length of query: 539
length of database: 14,973,337
effective HSP length: 104
effective length of query: 435
effective length of database: 8,465,225
effective search space: 3682372875
effective search space used: 3682372875
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)