BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16344
(218 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3DC6|A Chain A, Crystal Structure Of A Manganese Superoxide Dismutases
From Caenorhabditis Elegans
pdb|3DC6|C Chain C, Crystal Structure Of A Manganese Superoxide Dismutases
From Caenorhabditis Elegans
Length = 198
Score = 263 bits (672), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 124/193 (64%), Positives = 148/193 (76%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y DLEPVI+ EIM+LHH KHH TYV N N EKL AV+ + + L PA
Sbjct: 5 LPDLPYDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSKGNVKEAIALQPA 64
Query: 84 LKFNGGGHINHALFWKMLNKNGGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWG 143
LKFNGGGHINH++FW L K+GG+PS +L AIK+ FGSLD L+ +L+A++V +QGSGWG
Sbjct: 65 LKFNGGGHINHSIFWTNLAKDGGEPSAELLTAIKSDFGSLDNLQKQLSASTVAVQGSGWG 124
Query: 144 WLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIM 203
WLGY PK K LK+AT ANQDPL TTGL PLFGIDVWEHAYYLQYKNVRP+YV AI+ I
Sbjct: 125 WLGYCPKGKILKVATCANQDPLEATTGLVPLFGIDVWEHAYYLQYKNVRPDYVNAIWKIA 184
Query: 204 NWNYINELYAKAK 216
NW ++E +AKA+
Sbjct: 185 NWKNVSERFAKAQ 197
>pdb|1N0J|A Chain A, The Structure Of Human Mitochondrial Mn3+ Superoxide
Dismutase Reveals A Novel Tetrameric Interface Of Two
4-Helix Bundles
pdb|1N0J|B Chain B, The Structure Of Human Mitochondrial Mn3+ Superoxide
Dismutase Reveals A Novel Tetrameric Interface Of Two
4-Helix Bundles
Length = 199
Score = 245 bits (625), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSKHH YV N N EK + A+A D +A + L PA
Sbjct: 5 LPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPA 64
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 65 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 124
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVWEHAYYLQYKNVRP+Y+KAI+++
Sbjct: 125 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNV 184
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 185 INWENVTERYMACK 198
>pdb|1MSD|A Chain A, Comparison Of The Crystal Structures Of Genetically
Engineered Human Manganese Superoxide Dismutase And
Manganese Superoxide Dismutase From Thermus
Thermophilus. Differences In Dimer-Dimer Interactions.
pdb|1MSD|B Chain B, Comparison Of The Crystal Structures Of Genetically
Engineered Human Manganese Superoxide Dismutase And
Manganese Superoxide Dismutase From Thermus
Thermophilus. Differences In Dimer-Dimer Interactions.
pdb|1LUV|A Chain A, Catalytic And Structural Effects Of Amino-acid
Substitution At His 30 In Human Manganese Superoxide
Dismutase: Insertion Of Val Cgamma Into The Substrate
Access Channel
pdb|1LUV|B Chain B, Catalytic And Structural Effects Of Amino-acid
Substitution At His 30 In Human Manganese Superoxide
Dismutase: Insertion Of Val Cgamma Into The Substrate
Access Channel
pdb|2ADQ|B Chain B, Human Manganese Superoxide Dismutase
Length = 198
Score = 245 bits (625), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSKHH YV N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVWEHAYYLQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 184 INWENVTERYMACK 197
>pdb|1VAR|A Chain A, Mitochondrial Manganese Superoxide Dismutase Variant With
Ile 58 Replaced By Thr
pdb|1VAR|B Chain B, Mitochondrial Manganese Superoxide Dismutase Variant With
Ile 58 Replaced By Thr
Length = 198
Score = 244 bits (622), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 142/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSKHH YV N N EK + A+A D +A L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQTALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVWEHAYYLQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 184 INWENVTERYMACK 197
>pdb|1PL4|A Chain A, Crystal Structure Of Human Mnsod Y166f Mutant
pdb|1PL4|B Chain B, Crystal Structure Of Human Mnsod Y166f Mutant
pdb|1PL4|C Chain C, Crystal Structure Of Human Mnsod Y166f Mutant
pdb|1PL4|D Chain D, Crystal Structure Of Human Mnsod Y166f Mutant
Length = 198
Score = 243 bits (621), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSKHH YV N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVWEHAY+LQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYFLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 184 INWENVTERYMACK 197
>pdb|1AP5|A Chain A, Tyr34->phe Mutant Of Human Mitochondrial Manganese
Superoxide Dismutase
pdb|1AP5|B Chain B, Tyr34->phe Mutant Of Human Mitochondrial Manganese
Superoxide Dismutase
pdb|1AP6|A Chain A, Tyr34->phe Mutant Of Human Mitochondrial Manganese
Superoxide Dismutase
pdb|1AP6|B Chain B, Tyr34->phe Mutant Of Human Mitochondrial Manganese
Superoxide Dismutase
Length = 198
Score = 243 bits (621), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSKHH +V N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKHHAAFVNNLNVTEEKYQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVWEHAYYLQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 184 INWENVTERYMACK 197
>pdb|3C3T|A Chain A, Role Of A Glutamate Bridge Spanning The Dimeric Interface
Of Human Manganese Superoxide Dismutase
pdb|3C3T|B Chain B, Role Of A Glutamate Bridge Spanning The Dimeric Interface
Of Human Manganese Superoxide Dismutase
Length = 198
Score = 243 bits (621), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSKHH YV N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVW+HAYYLQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWDHAYYLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 184 INWENVTERYMACK 197
>pdb|3DC5|A Chain A, Crystal Structure Of A Manganese Superoxide Dismutases
From Caenorhabditis Elegans
pdb|3DC5|C Chain C, Crystal Structure Of A Manganese Superoxide Dismutases
From Caenorhabditis Elegans
Length = 195
Score = 243 bits (620), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 117/194 (60%), Positives = 140/194 (72%), Gaps = 3/194 (1%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L + Y DLEPVI+ EIM+LHH KHH TYV N N EKL AV+ + + L PA
Sbjct: 5 LPDLPFDYADLEPVISHEIMQLHHQKHHATYVNNLNQIEEKLHEAVSKGNLKEAIALQPA 64
Query: 84 LKFNGGGHINHALFWKMLNKNGGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWG 143
LKFNGGGHINH++FW L K+GG+PS +L + IK FGSLD L+ L+ ++ +QGSGWG
Sbjct: 65 LKFNGGGHINHSIFWTNLAKDGGEPSKELMDTIKRDFGSLDNLQKRLSDITIAVQGSGWG 124
Query: 144 WLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIM 203
WLGY K K LKIAT ANQDPL G+ PLFGIDVWEHAYYLQYKNVRP+YV AI+ I
Sbjct: 125 WLGYCKKDKILKIATCANQDPL---EGMVPLFGIDVWEHAYYLQYKNVRPDYVHAIWKIA 181
Query: 204 NWNYINELYAKAKS 217
NW I+E +A A+
Sbjct: 182 NWKNISERFANARQ 195
>pdb|1ZTE|A Chain A, Contribution To Structure And Catalysis Of Tyrosine 34 In
Human Manganese Suerpoxide Dismutase
pdb|1ZTE|B Chain B, Contribution To Structure And Catalysis Of Tyrosine 34 In
Human Manganese Suerpoxide Dismutase
pdb|1ZTE|C Chain C, Contribution To Structure And Catalysis Of Tyrosine 34 In
Human Manganese Suerpoxide Dismutase
pdb|1ZTE|D Chain D, Contribution To Structure And Catalysis Of Tyrosine 34 In
Human Manganese Suerpoxide Dismutase
Length = 198
Score = 243 bits (620), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSKHH +V N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKHHAAHVNNLNVTEEKYQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVWEHAYYLQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 184 INWENVTERYMACK 197
>pdb|3C3S|A Chain A, Role Of A Glutamate Bridge Spanning The Dimeric Interface
Of Human Manganese Superoxide Dismutase
pdb|3C3S|B Chain B, Role Of A Glutamate Bridge Spanning The Dimeric Interface
Of Human Manganese Superoxide Dismutase
Length = 198
Score = 242 bits (618), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 142/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSKHH YV N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVW HAYYLQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWAHAYYLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 184 INWENVTERYMACK 197
>pdb|1QNM|A Chain A, Human Manganese Superoxide Dismutase Mutant Q143n
pdb|1QNM|B Chain B, Human Manganese Superoxide Dismutase Mutant Q143n
Length = 198
Score = 242 bits (618), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 142/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSKHH YV N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA N DPL TTGL PL GIDVWEHAYYLQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNNDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 184 INWENVTERYMACK 197
>pdb|1EM1|A Chain A, X-Ray Crystal Structure For Human Manganese Superoxide
Dismutase, Q143a
pdb|1EM1|B Chain B, X-Ray Crystal Structure For Human Manganese Superoxide
Dismutase, Q143a
Length = 198
Score = 242 bits (618), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 142/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSKHH YV N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA N DPL TTGL PL GIDVWEHAYYLQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNADPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 184 INWENVTERYMACK 197
>pdb|1LUW|A Chain A, Catalytic And Structural Effects Of Amino-Acid
Substitution At His 30 In Human Manganese Superoxide
Dismutase: Insertion Of Val Cgamma Into The Substrate
Access Channel
pdb|1LUW|B Chain B, Catalytic And Structural Effects Of Amino-Acid
Substitution At His 30 In Human Manganese Superoxide
Dismutase: Insertion Of Val Cgamma Into The Substrate
Access Channel
Length = 198
Score = 242 bits (618), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 142/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSK H YV N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKQHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVWEHAYYLQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 184 INWENVTERYMACK 197
>pdb|2ADP|A Chain A, Nitrated Human Manganese Superoxide Dismutase
Length = 198
Score = 242 bits (618), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 142/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSKHH V N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKHHAAXVNNLNVTEEKYQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVWEHAYYLQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 184 INWENVTERYMACK 197
>pdb|1ZUQ|A Chain A, Contribution To Structure And Catalysis Of Tyrosine 34 In
Human Manganese Superoxide Dismutase
pdb|1ZUQ|B Chain B, Contribution To Structure And Catalysis Of Tyrosine 34 In
Human Manganese Superoxide Dismutase
Length = 198
Score = 242 bits (618), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 142/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSKHH V N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKHHAAVVNNLNVTEEKYQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVWEHAYYLQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 184 INWENVTERYMACK 197
>pdb|2GDS|A Chain A, Interrupting The Hydrogen Bonding Network At The Active
Site Of Human Manganese Superoxide Dismutase
pdb|2GDS|B Chain B, Interrupting The Hydrogen Bonding Network At The Active
Site Of Human Manganese Superoxide Dismutase
pdb|2GDS|C Chain C, Interrupting The Hydrogen Bonding Network At The Active
Site Of Human Manganese Superoxide Dismutase
pdb|2GDS|D Chain D, Interrupting The Hydrogen Bonding Network At The Active
Site Of Human Manganese Superoxide Dismutase
Length = 198
Score = 242 bits (617), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSK+H YV N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKNHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVWEHAYYLQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 184 INWENVTERYMACK 197
>pdb|1ZSP|A Chain A, Contribution To Structure And Catalysis Of Tyrosine 34 In
Human Manganese Superoxide Dismutase
pdb|1ZSP|B Chain B, Contribution To Structure And Catalysis Of Tyrosine 34 In
Human Manganese Superoxide Dismutase
Length = 198
Score = 242 bits (617), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 142/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSKHH V N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKHHAAAVNNLNVTEEKYQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVWEHAYYLQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 184 INWENVTERYMACK 197
>pdb|2P4K|A Chain A, Contribution To Structure And Catalysis Of Tyrosine 34 In
Human Manganese Superoxide Dismutase
pdb|2P4K|B Chain B, Contribution To Structure And Catalysis Of Tyrosine 34 In
Human Manganese Superoxide Dismutase
pdb|2P4K|C Chain C, Contribution To Structure And Catalysis Of Tyrosine 34 In
Human Manganese Superoxide Dismutase
pdb|2P4K|D Chain D, Contribution To Structure And Catalysis Of Tyrosine 34 In
Human Manganese Superoxide Dismutase
Length = 198
Score = 241 bits (616), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 142/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSKHH V N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKHHAANVNNLNVTEEKYQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVWEHAYYLQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 184 INWENVTERYMACK 197
>pdb|1N0N|A Chain A, Catalytic And Structural Effects Of Amino-Acid
Substitution At His30 In Human Manganese Superoxide
Dismutase
pdb|1N0N|B Chain B, Catalytic And Structural Effects Of Amino-Acid
Substitution At His30 In Human Manganese Superoxide
Dismutase
Length = 199
Score = 241 bits (614), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 142/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSK H YV N N EK + A+A D +A + L PA
Sbjct: 5 LPDLPYDYGALEPHINAQIMQLHHSKVHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPA 64
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 65 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 124
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVWEHAYYLQYKNVRP+Y+KAI+++
Sbjct: 125 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNV 184
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 185 INWENVTERYMACK 198
>pdb|1PM9|A Chain A, Crystal Structure Of Human Mnsod H30n, Y166f Mutant
pdb|1PM9|B Chain B, Crystal Structure Of Human Mnsod H30n, Y166f Mutant
Length = 198
Score = 241 bits (614), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSK+H YV N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKNHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVWEHAY+LQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYFLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 184 INWENVTERYMACK 197
>pdb|2QKC|A Chain A, Structural And Kinetic Study Of The Differences Between
Human And E.Coli Manganese Superoxide Dismutases
pdb|2QKC|C Chain C, Structural And Kinetic Study Of The Differences Between
Human And E.Coli Manganese Superoxide Dismutases
Length = 196
Score = 241 bits (614), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 115/190 (60%), Positives = 141/190 (74%), Gaps = 1/190 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSKHH YV N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LK NGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKLNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVWEHAYYLQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELY 212
+NW + E Y
Sbjct: 184 INWENVTERY 193
>pdb|1SZX|A Chain A, Role Of Hydrogen Bonding In The Active Site Of Human
Manganese Superoxide Dismutase
pdb|1SZX|B Chain B, Role Of Hydrogen Bonding In The Active Site Of Human
Manganese Superoxide Dismutase
Length = 198
Score = 241 bits (614), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 115/194 (59%), Positives = 143/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSKHH +V N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKHHAAFVNNLNVTEEKYQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSG+
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGF 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVWEHAYYLQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 184 INWENVTERYMACK 197
>pdb|1JA8|A Chain A, Kinetic Analysis Of Product Inhibition In Human Manganese
Superoxide Dismutase
pdb|1JA8|B Chain B, Kinetic Analysis Of Product Inhibition In Human Manganese
Superoxide Dismutase
Length = 198
Score = 240 bits (613), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 116/194 (59%), Positives = 142/194 (73%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSKHH YV N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDV EHAYYLQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVAEHAYYLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E Y K
Sbjct: 184 INWENVTERYMACK 197
>pdb|2QKA|A Chain A, Structural And Kinetic Study Of The Differences Between
Human And E.Coli Manganese Superoxide Dismutases
pdb|2QKA|C Chain C, Structural And Kinetic Study Of The Differences Between
Human And E.Coli Manganese Superoxide Dismutases
Length = 196
Score = 240 bits (612), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 115/190 (60%), Positives = 141/190 (74%), Gaps = 1/190 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L Y Y LEP IN++IM+LHHSKHH YV N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPYDYGALEPHINAQIMQLHHSKHHAAYVNNLNVTEEKYQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LK NGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKANGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVWEHAYYLQYKNVRP+Y+KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNV 183
Query: 203 MNWNYINELY 212
+NW + E Y
Sbjct: 184 INWENVTERY 193
>pdb|1XIL|A Chain A, Hydrogen Bonding In Human Manganese Superoxide Dismutase
Containing 3- Fluorotyrosine
pdb|1XIL|B Chain B, Hydrogen Bonding In Human Manganese Superoxide Dismutase
Containing 3- Fluorotyrosine
Length = 198
Score = 225 bits (573), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/194 (56%), Positives = 136/194 (70%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L LEP IN++IM+LHHSKHH +V N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPXDXGALEPHINAQIMQLHHSKHHAAFVNNLNVTEEKXQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVWEHA LQ KNVRP+ +KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAXXLQXKNVRPDXLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E K
Sbjct: 184 INWENVTERXMACK 197
>pdb|1XDC|A Chain A, Hydrogen Bonding In Human Manganese Superoxide Dismutase
Containing 3- Fluorotyrosine
pdb|1XDC|B Chain B, Hydrogen Bonding In Human Manganese Superoxide Dismutase
Containing 3- Fluorotyrosine
Length = 198
Score = 223 bits (569), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 109/194 (56%), Positives = 135/194 (69%), Gaps = 1/194 (0%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP L LEP IN++IM+LHHSKHH V N N EK + A+A D +A + L PA
Sbjct: 4 LPDLPXDXGALEPHINAQIMQLHHSKHHAAXVNNLNVTEEKXQEALAKGDVTAQIALQPA 63
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
LKFNGGGHINH++FW L+ NGG +P +L AIK FGS DK K++LTAASVG+QGSGW
Sbjct: 64 LKFNGGGHINHSIFWTNLSPNGGGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGW 123
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
GWLG++ + L+IA NQDPL TTGL PL GIDVWEHA LQ KNVRP+ +KAI+++
Sbjct: 124 GWLGFNKERGHLQIAACPNQDPLQGTTGLIPLLGIDVWEHAXXLQXKNVRPDXLKAIWNV 183
Query: 203 MNWNYINELYAKAK 216
+NW + E K
Sbjct: 184 INWENVTERXMACK 197
>pdb|1KKC|A Chain A, Crystal Structure Of Aspergillus Fumigatus Mnsod
pdb|1KKC|B Chain B, Crystal Structure Of Aspergillus Fumigatus Mnsod
pdb|1KKC|X Chain X, Crystal Structure Of Aspergillus Fumigatus Mnsod
pdb|1KKC|Y Chain Y, Crystal Structure Of Aspergillus Fumigatus Mnsod
Length = 221
Score = 192 bits (488), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 127/204 (62%), Gaps = 16/204 (7%)
Query: 14 TSPILQGPIE-------LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLK 66
TSPI Q PI LP L Y Y L+P I+ +IMELHH KHHQTYV NAALE K
Sbjct: 2 TSPI-QTPINTMSQQYTLPPLPYPYDALQPYISQQIMELHHKKHHQTYVNGLNAALEAQK 60
Query: 67 AAVANNDASAIVQLGPALKFNGGGHINHALFWKML--NKNGGKPSDD---LSNAIKASFG 121
A D +V + A+KFNGGGHINH+LFWK L K+GG D L AI+ +G
Sbjct: 61 KAAEATDVPKLVSVQQAIKFNGGGHINHSLFWKNLAPEKSGGGKIDQAPVLKAAIEQRWG 120
Query: 122 SLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWE 181
S DK KD +GIQGSGWGWL D L I TT +QDP+ TG P+FG+D+WE
Sbjct: 121 SFDKFKDAFNTTLLGIQGSGWGWLVTDGPKGKLDITTTHDQDPV---TGAAPVFGVDMWE 177
Query: 182 HAYYLQYKNVRPNYVKAIYDIMNW 205
HAYYLQY N + +Y K I++++NW
Sbjct: 178 HAYYLQYLNDKASYAKGIWNVINW 201
>pdb|3MDS|A Chain A, Maganese Superoxide Dismutase From Thermus Thermophilus
pdb|3MDS|B Chain B, Maganese Superoxide Dismutase From Thermus Thermophilus
pdb|1MNG|A Chain A, Structure-Function In E. Coli Iron Superoxide Dismutase:
Comparisons With The Manganese Enzyme From T.
Thermophilus
pdb|1MNG|B Chain B, Structure-Function In E. Coli Iron Superoxide Dismutase:
Comparisons With The Manganese Enzyme From T.
Thermophilus
Length = 203
Score = 181 bits (459), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 133/204 (65%), Gaps = 12/204 (5%)
Query: 21 PIELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEK------LKAAVANNDA 74
P +LP L Y Y+ LEP I+++ ME+HH KHH YVTN NAALEK ++ V
Sbjct: 3 PFKLPDLGYPYEALEPHIDAKTMEIHHQKHHGAYVTNLNAALEKYPYLHGVEVEVLLRHL 62
Query: 75 SAIVQ-LGPALKFNGGGHINHALFWKMLNKNGGK-PSDDLSNAIKASFGSLDKLKDELTA 132
+A+ Q + A++ NGGGH+NH+LFW++L G K P +L AI FG LK++LT
Sbjct: 63 AALPQDIQTAVRNNGGGHLNHSLFWRLLTPGGAKEPVGELKKAIDEQFGGFQALKEKLTQ 122
Query: 133 ASVGIQGSGWGWLGYDPKSKSLKIATTANQD-PLFETTGLKPLFGIDVWEHAYYLQYKNV 191
A++G GSGW WL DP K L + +T NQD P+ E G P+ GIDVWEHAYYL+Y+N
Sbjct: 123 AAMGRFGSGWAWLVKDPFGK-LHVLSTPNQDNPVME--GFTPIVGIDVWEHAYYLKYQNR 179
Query: 192 RPNYVKAIYDIMNWNYINELYAKA 215
R +Y++AI++++NW+ E + KA
Sbjct: 180 RADYLQAIWNVLNWDVAEEFFKKA 203
>pdb|2RCV|A Chain A, Crystal Structure Of The Bacillus Subtilis Superoxide
Dismutase
pdb|2RCV|B Chain B, Crystal Structure Of The Bacillus Subtilis Superoxide
Dismutase
pdb|2RCV|C Chain C, Crystal Structure Of The Bacillus Subtilis Superoxide
Dismutase
pdb|2RCV|D Chain D, Crystal Structure Of The Bacillus Subtilis Superoxide
Dismutase
pdb|2RCV|E Chain E, Crystal Structure Of The Bacillus Subtilis Superoxide
Dismutase
pdb|2RCV|F Chain F, Crystal Structure Of The Bacillus Subtilis Superoxide
Dismutase
pdb|2RCV|G Chain G, Crystal Structure Of The Bacillus Subtilis Superoxide
Dismutase
pdb|2RCV|H Chain H, Crystal Structure Of The Bacillus Subtilis Superoxide
Dismutase
Length = 202
Score = 175 bits (443), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 130/204 (63%), Gaps = 15/204 (7%)
Query: 23 ELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIV---- 78
ELP+L Y Y LEP I+ E M +HH+KHH TYVTN N A+E A+AN +V
Sbjct: 4 ELPELPYAYDALEPHIDKETMTIHHTKHHNTYVTNLNKAVEG-NTALANKSVEELVADLD 62
Query: 79 ----QLGPALKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAA 133
+ A++ NGGGH NH LFW +L+ NGG +P+ L+ I + FGS DK K++ AA
Sbjct: 63 SVPENIRTAVRNNGGGHANHKLFWTLLSPNGGGEPTGALAEEINSVFGSFDKFKEQFAAA 122
Query: 134 SVGIQGSGWGWLGYDPKSKSLKIATTANQD-PLFETTGLKPLFGIDVWEHAYYLQYKNVR 192
+ G GSGW WL + + L+I +T NQD PL E G P+ G+DVWEHAYYL Y+N R
Sbjct: 123 AAGRFGSGWAWLVVN--NGKLEITSTPNQDSPLSE--GKTPILGLDVWEHAYYLNYQNRR 178
Query: 193 PNYVKAIYDIMNWNYINELYAKAK 216
P+Y+ A ++++NW+ + LY++ K
Sbjct: 179 PDYISAFWNVVNWDEVARLYSERK 202
>pdb|1GN3|A Chain A, H145q Mutant Of Mycobacterium Tuberculosis Iron-Superoxide
Dismutase.
pdb|1GN3|B Chain B, H145q Mutant Of Mycobacterium Tuberculosis Iron-Superoxide
Dismutase
Length = 207
Score = 174 bits (440), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 123/195 (63%), Gaps = 2/195 (1%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP LD+ Y LEP I+ +I ELHHSKHH TYV N A+ KL+ A A D SAI+
Sbjct: 6 LPDLDWDYGALEPHISGQINELHHSKHHATYVKGANDAVAKLEEARAKEDHSAILLNEKN 65
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
L FN GH+NH ++WK L+ NGG KP+ +L+ AI +FGS DK + + AA+ +QGSGW
Sbjct: 66 LAFNLAGHVNHTIWWKNLSPNGGDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGW 125
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
LG+D L I +Q F G+ PL +D+WEHA+YLQYKNV+ ++ KA +++
Sbjct: 126 AALGWDTLGNKLLIFQVYDQQTNF-PLGIVPLLLLDMWEHAFYLQYKNVKVDFAKAFWNV 184
Query: 203 MNWNYINELYAKAKS 217
+NW + YA A S
Sbjct: 185 VNWADVQSRYAAATS 199
>pdb|1XUQ|A Chain A, Crystal Structure Of Soda-1 (Ba4499) From Bacillus
Anthracis At 1.8a Resolution.
pdb|1XUQ|B Chain B, Crystal Structure Of Soda-1 (Ba4499) From Bacillus
Anthracis At 1.8a Resolution
Length = 212
Score = 172 bits (436), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/204 (44%), Positives = 125/204 (61%), Gaps = 15/204 (7%)
Query: 23 ELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQ--- 79
ELP L Y Y LEP + E M +HH+KHH TY+TN NAALE A +A+ +V
Sbjct: 14 ELPNLPYAYDALEPHFDKETMNIHHTKHHNTYITNLNAALEG-HAELADKSVEELVANLN 72
Query: 80 -----LGPALKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAA 133
+ A++ NGGGH NH FW +L+ NGG +P +L+ AI+A FGS D K+E A
Sbjct: 73 EVPEAIRTAVRNNGGGHANHTFFWTILSPNGGGQPVGELATAIEAKFGSFDAFKEEFAKA 132
Query: 134 SVGIQGSGWGWLGYDPKSKSLKIATTANQD-PLFETTGLKPLFGIDVWEHAYYLQYKNVR 192
GSGW WL + + L++ +T NQD PL T G P+ G+DVWEHAYYL Y+N R
Sbjct: 133 GATRFGSGWAWLVVN--NGELEVTSTPNQDSPL--TEGKTPVIGLDVWEHAYYLNYQNRR 188
Query: 193 PNYVKAIYDIMNWNYINELYAKAK 216
P+Y+ A +++++WN + Y +AK
Sbjct: 189 PDYIGAFWNVVDWNAAEKRYQEAK 212
>pdb|1GN4|A Chain A, H145e Mutant Of Mycobacterium Tuberculosis Iron-Superoxide
Dismutase.
pdb|1GN4|B Chain B, H145e Mutant Of Mycobacterium Tuberculosis Iron-Superoxide
Dismutase.
pdb|1GN4|C Chain C, H145e Mutant Of Mycobacterium Tuberculosis Iron-Superoxide
Dismutase.
pdb|1GN4|D Chain D, H145e Mutant Of Mycobacterium Tuberculosis Iron-Superoxide
Dismutase
Length = 207
Score = 172 bits (436), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 123/195 (63%), Gaps = 2/195 (1%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP LD+ Y LEP I+ +I ELHHSKHH TYV N A+ KL+ A A D SAI+
Sbjct: 6 LPDLDWDYGALEPHISGQINELHHSKHHATYVKGANDAVAKLEEARAKEDHSAILLNEKN 65
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
L FN GH+NH ++WK L+ NGG KP+ +L+ AI +FGS DK + + AA+ +QGSGW
Sbjct: 66 LAFNLAGHVNHTIWWKNLSPNGGDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGW 125
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
LG+D L I ++ F G+ PL +D+WEHA+YLQYKNV+ ++ KA +++
Sbjct: 126 AALGWDTLGNKLLIFQVYDEQTNF-PLGIVPLLLLDMWEHAFYLQYKNVKVDFAKAFWNV 184
Query: 203 MNWNYINELYAKAKS 217
+NW + YA A S
Sbjct: 185 VNWADVQSRYAAATS 199
>pdb|1IDS|A Chain A, X-Ray Structure Analysis Of The Iron-Dependent Superoxide
Dismutase From Mycobacterium Tuberculosis At 2.0
Angstroms Resolutions Reveals Novel Dimer-Dimer
Interactions
pdb|1IDS|B Chain B, X-Ray Structure Analysis Of The Iron-Dependent Superoxide
Dismutase From Mycobacterium Tuberculosis At 2.0
Angstroms Resolutions Reveals Novel Dimer-Dimer
Interactions
pdb|1IDS|C Chain C, X-Ray Structure Analysis Of The Iron-Dependent Superoxide
Dismutase From Mycobacterium Tuberculosis At 2.0
Angstroms Resolutions Reveals Novel Dimer-Dimer
Interactions
pdb|1IDS|D Chain D, X-Ray Structure Analysis Of The Iron-Dependent Superoxide
Dismutase From Mycobacterium Tuberculosis At 2.0
Angstroms Resolutions Reveals Novel Dimer-Dimer
Interactions
Length = 207
Score = 171 bits (434), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/195 (46%), Positives = 122/195 (62%), Gaps = 2/195 (1%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP LD+ Y LEP I+ +I ELHHSKHH TYV N A+ KL+ A A D SAI+
Sbjct: 6 LPDLDWDYGALEPHISGQINELHHSKHHATYVKGANDAVAKLEEARAKEDHSAILLNEKN 65
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
L FN GH+NH ++WK L+ NGG KP+ +L+ AI +FGS DK + + AA+ +QGSGW
Sbjct: 66 LAFNLAGHVNHTIWWKNLSPNGGDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGW 125
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
LG+D L I + F G+ PL +D+WEHA+YLQYKNV+ ++ KA +++
Sbjct: 126 AALGWDTLGNKLLIFQVYDHQTNF-PLGIVPLLLLDMWEHAFYLQYKNVKVDFAKAFWNV 184
Query: 203 MNWNYINELYAKAKS 217
+NW + YA A S
Sbjct: 185 VNWADVQSRYAAATS 199
>pdb|1AR4|A Chain A, X-Ray Structure Analysis Of The Cambialistic Superoxide
Dismutase From Propionibacterium Shermanii Active With
Fe Or Mn
pdb|1AR4|B Chain B, X-Ray Structure Analysis Of The Cambialistic Superoxide
Dismutase From Propionibacterium Shermanii Active With
Fe Or Mn
pdb|1AR5|A Chain A, X-Ray Structure Of The Cambialistic Superoxide Dismutase
From Propionibacterium Shermanii Active With Fe Or Mn
pdb|1AR5|B Chain B, X-Ray Structure Of The Cambialistic Superoxide Dismutase
From Propionibacterium Shermanii Active With Fe Or Mn
pdb|1AVM|A Chain A, The Cambialistic Superoxide Dismutase (Fe-Sod) Of P.
Shermanii Coordinated By Azide
pdb|1AVM|B Chain B, The Cambialistic Superoxide Dismutase (Fe-Sod) Of P.
Shermanii Coordinated By Azide
pdb|1BS3|A Chain A, P.Shermanii Sod(Fe+3) Fluoride
pdb|1BS3|B Chain B, P.Shermanii Sod(Fe+3) Fluoride
pdb|1BSM|A Chain A, P.Shermanii Sod(Fe+3) 140k Ph8
pdb|1BSM|B Chain B, P.Shermanii Sod(Fe+3) 140k Ph8
pdb|1BT8|A Chain A, P.Shermanii Sod(Fe+3) Ph 10.0
pdb|1BT8|B Chain B, P.Shermanii Sod(Fe+3) Ph 10.0
Length = 201
Score = 171 bits (432), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/199 (45%), Positives = 124/199 (62%), Gaps = 10/199 (5%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP+L Y Y LEP I+ EIMELHH KHH+ YV N AL+KL A D AI +L
Sbjct: 5 LPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLAEARDKADFGAINKLEKD 64
Query: 84 LKFNGGGHINHALFWKMLNKNGG---KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGS 140
L FN GH+NH++FWK + G +P+D+L AI FGS D +K + TAA+ GIQGS
Sbjct: 65 LAFNLAGHVNHSVFWKNMAPKGSAPERPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGS 124
Query: 141 GWGWLGYDPKSK---SLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVK 197
GW L +DP K +L+ N P G PL +D+WEHA+YLQYKNV+ +YVK
Sbjct: 125 GWASLVWDPLGKRINTLQFYDHQNNLP----AGSIPLLQLDMWEHAFYLQYKNVKGDYVK 180
Query: 198 AIYDIMNWNYINELYAKAK 216
+ ++++NW+ + +++A+
Sbjct: 181 SWWNVVNWDDVALRFSEAR 199
>pdb|1GN2|A Chain A, S123c Mutant Of The Iron-Superoxide Dismutase From
Mycobacterium Tuberculosis.
pdb|1GN2|B Chain B, S123c Mutant Of The Iron-Superoxide Dismutase From
Mycobacterium Tuberculosis.
pdb|1GN2|C Chain C, S123c Mutant Of The Iron-Superoxide Dismutase From
Mycobacterium Tuberculosis.
pdb|1GN2|D Chain D, S123c Mutant Of The Iron-Superoxide Dismutase From
Mycobacterium Tuberculosis.
pdb|1GN2|E Chain E, S123c Mutant Of The Iron-Superoxide Dismutase From
Mycobacterium Tuberculosis.
pdb|1GN2|F Chain F, S123c Mutant Of The Iron-Superoxide Dismutase From
Mycobacterium Tuberculosis.
pdb|1GN2|G Chain G, S123c Mutant Of The Iron-Superoxide Dismutase From
Mycobacterium Tuberculosis.
pdb|1GN2|H Chain H, S123c Mutant Of The Iron-Superoxide Dismutase From
Mycobacterium Tuberculosis
Length = 207
Score = 170 bits (431), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 121/195 (62%), Gaps = 2/195 (1%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP LD+ Y LEP I+ +I ELHHSKHH TYV N A+ KL+ A A D SAI+
Sbjct: 6 LPDLDWDYGALEPHISGQINELHHSKHHATYVKGANDAVAKLEEARAKEDHSAILLNEKN 65
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
L FN GH+NH ++WK L+ NGG KP+ +L+ AI +FGS DK + + AA+ +QG GW
Sbjct: 66 LAFNLAGHVNHTIWWKNLSPNGGDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGCGW 125
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
LG+D L I + F G+ PL +D+WEHA+YLQYKNV+ ++ KA +++
Sbjct: 126 AALGWDTLGNKLLIFQVYDHQTNF-PLGIVPLLLLDMWEHAFYLQYKNVKVDFAKAFWNV 184
Query: 203 MNWNYINELYAKAKS 217
+NW + YA A S
Sbjct: 185 VNWADVQSRYAAATS 199
>pdb|1GN6|A Chain A, G152a Mutant Of Mycobacterium Tuberculosis Iron-Superoxide
Dismutase.
pdb|1GN6|B Chain B, G152a Mutant Of Mycobacterium Tuberculosis Iron-Superoxide
Dismutase.
pdb|1GN6|C Chain C, G152a Mutant Of Mycobacterium Tuberculosis Iron-Superoxide
Dismutase.
pdb|1GN6|D Chain D, G152a Mutant Of Mycobacterium Tuberculosis Iron-Superoxide
Dismutase
Length = 207
Score = 169 bits (428), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 121/195 (62%), Gaps = 2/195 (1%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
LP LD+ Y LEP I+ +I ELHHSKHH TYV N A+ KL+ A A D SAI+
Sbjct: 6 LPDLDWDYGALEPHISGQINELHHSKHHATYVKGANDAVAKLEEARAKEDHSAILLNEKN 65
Query: 84 LKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
L FN GH+NH ++WK L+ NGG KP+ +L+ AI +FGS DK + + AA+ +QGSGW
Sbjct: 66 LAFNLAGHVNHTIWWKNLSPNGGDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGW 125
Query: 143 GWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDI 202
LG+D L I + F + PL +D+WEHA+YLQYKNV+ ++ KA +++
Sbjct: 126 AALGWDTLGNKLLIFQVYDHQTNF-PLAIVPLLLLDMWEHAFYLQYKNVKVDFAKAFWNV 184
Query: 203 MNWNYINELYAKAKS 217
+NW + YA A S
Sbjct: 185 VNWADVQSRYAAATS 199
>pdb|1JR9|A Chain A, Crystal Structure Of Manganese Superoxide Dismutases From
Bacillus Halodenitrificans
Length = 202
Score = 169 bits (427), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 132/204 (64%), Gaps = 15/204 (7%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALE--------KLKAAVANND 73
ELP+L Y Y LEP I+ E M +HH+KHH TYVT N ALE L ++N D
Sbjct: 3 FELPELPYAYDALEPTIDKETMNIHHTKHHNTYVTKLNGALEGHEDLKNKSLNDLISNLD 62
Query: 74 ASAIVQLGPALKFNGGGHINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTA 132
A + A++ NGGGH NH+LFWK+++ NGG KP+ ++++ I +GS +K ++E A
Sbjct: 63 AVP-ENIRTAVRNNGGGHANHSLFWKLMSPNGGGKPTGEVADKINDKYGSFEKFQEEFAA 121
Query: 133 ASVGIQGSGWGWLGYDPKSKSLKIATTANQD-PLFETTGLKPLFGIDVWEHAYYLQYKNV 191
A+ G GSGW WL + + ++I +T QD PL E G KP+ G+DVWEHAYYL+Y+N
Sbjct: 122 AAAGRFGSGWAWLVVN--NGEIEIMSTPIQDNPLME--GKKPILGLDVWEHAYYLKYQNK 177
Query: 192 RPNYVKAIYDIMNWNYINELYAKA 215
RP+Y+ A ++++NW+ + Y++A
Sbjct: 178 RPDYISAFWNVVNWDEVAAQYSQA 201
>pdb|3QVN|A Chain A, Crystal Structure Of Cytosolic Mnsod3 From Candida
Albicans
Length = 206
Score = 164 bits (414), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/191 (45%), Positives = 122/191 (63%), Gaps = 8/191 (4%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG 81
I LPK+D+ LEP I+ EI +LH +KHH YV YNAA++ L+ AV D ++V++
Sbjct: 8 ISLPKIDWALDALEPYISKEINDLHINKHHVAYVNGYNAAIDALEKAVGKRDLKSVVEIQ 67
Query: 82 PALKFNGGGHINHALFWKML---NKNGGKPSDD---LSNAIKASFGSLDKLKDELTAASV 135
+KF+GGGH NH+LFWK L +K GGK D L I A +GS+ L D +
Sbjct: 68 QNIKFHGGGHTNHSLFWKNLAPVSKGGGKHPDTSSALGKQIVAQYGSVSNLIDITNSKLA 127
Query: 136 GIQGSGWGWLGYDPKS-KSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPN 194
GIQGSGW ++ + ++ +L + TTANQD + L P+ ID WEHAYYLQY+NV+ +
Sbjct: 128 GIQGSGWAFIVKNKQNGGALDVVTTANQDTI-SAPHLVPIIAIDAWEHAYYLQYQNVKLD 186
Query: 195 YVKAIYDIMNW 205
Y KAI++++NW
Sbjct: 187 YFKAIWNVINW 197
>pdb|1GV3|A Chain A, The 2.0 Angstrom Resolution Structure Of The Catalytic
Portion Of A Cyanobacterial Membrane-Bound Manganese
Superoxide Dismutase
pdb|1GV3|B Chain B, The 2.0 Angstrom Resolution Structure Of The Catalytic
Portion Of A Cyanobacterial Membrane-Bound Manganese
Superoxide Dismutase
Length = 248
Score = 163 bits (413), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 83/208 (39%), Positives = 128/208 (61%), Gaps = 14/208 (6%)
Query: 21 PIELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQ- 79
P ELP L YGY LE I++E M+LHH KHH YV N N AL+K + N+ A+++
Sbjct: 37 PAELPPLPYGYDALEKAIDAETMKLHHDKHHAAYVNNLNNALKK-HPELQNSSVEALLRD 95
Query: 80 -------LGPALKFNGGGHINHALFWKMLNKN-GGKPSDDLSNAIKASFGSLDKLKDELT 131
+ ++ NGGGH+NH +FW++++ + GG+P+ D++ I +FGS ++ K +
Sbjct: 96 LNSVPEDIRTTVRNNGGGHLNHTIFWQIMSPDGGGQPTGDIAQEINQTFGSFEEFKKQFN 155
Query: 132 AASVGIQGSGWGWLGYDPKSKSLKIATTANQD-PLFETTGLKPLFGIDVWEHAYYLQYKN 190
A GSGW WL +P+ + L++ +T NQD P+ E G P+ G DVWEHAYYL+Y+N
Sbjct: 156 QAGGDRFGSGWVWLVRNPQGQ-LQVVSTPNQDNPIME--GSYPIMGNDVWEHAYYLRYQN 212
Query: 191 VRPNYVKAIYDIMNWNYINELYAKAKSS 218
RP Y+ ++++NW+ IN ++ S
Sbjct: 213 RRPEYLNNWWNVVNWSEINRRTQASRQS 240
>pdb|1XRE|A Chain A, Crystal Structure Of Soda-2 (Ba5696) From Bacillus
Anthracis At 1.8a Resolution.
pdb|1XRE|B Chain B, Crystal Structure Of Soda-2 (Ba5696) From Bacillus
Anthracis At 1.8a Resolution
Length = 217
Score = 162 bits (410), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 127/206 (61%), Gaps = 13/206 (6%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALE-------KLKAAVANNDA 74
+LPKL Y Y +LEP I+S + +HH KHH TYV N NAALE K + N
Sbjct: 13 FQLPKLSYDYDELEPYIDSNTLSIHHGKHHATYVNNLNAALENYSELHNKSLEELLCNLE 72
Query: 75 SAIVQLGPALKFNGGGHINHALFWKMLN-KNGGKPSDDLSNAIKASFGSLDKLKDELTAA 133
+ ++ A++ NGGGH H+LFW++++ + GG+P+ D++ I F + D LKD+L+ A
Sbjct: 73 TLPKEIVTAVRNNGGGHYCHSLFWEVMSPRGGGEPNGDVAKVIDYYFNTFDNLKDQLSKA 132
Query: 134 SVGIQGSGWGWLGYDPKSKSLKIATTANQD-PLFETTGLKPLFGIDVWEHAYYLQYKNVR 192
++ GSG+GWL D + L + +T NQD PL E G PL IDVWEHAYYL+Y+N R
Sbjct: 133 AISRFGSGYGWLVLD--GEELSVMSTPNQDTPLQE--GKIPLLVIDVWEHAYYLKYQNRR 188
Query: 193 PNYVKAIYDIMNWNYINELYAKAKSS 218
P +V + +NW+ +NE Y +A S
Sbjct: 189 PEFVTNWWHTVNWDRVNEKYLQAIQS 214
>pdb|1Y67|A Chain A, Crystal Structure Of Manganese Superoxide Dismutase From
Deinococcus Radiodurans
pdb|1Y67|B Chain B, Crystal Structure Of Manganese Superoxide Dismutase From
Deinococcus Radiodurans
pdb|1Y67|C Chain C, Crystal Structure Of Manganese Superoxide Dismutase From
Deinococcus Radiodurans
pdb|1Y67|D Chain D, Crystal Structure Of Manganese Superoxide Dismutase From
Deinococcus Radiodurans
pdb|2AW9|A Chain A, Superoxide Dismutase With Manganese From Deinococcus
Radiodurans
pdb|2AW9|B Chain B, Superoxide Dismutase With Manganese From Deinococcus
Radiodurans
Length = 229
Score = 160 bits (406), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 127/210 (60%), Gaps = 20/210 (9%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAA-------VANNDASA 76
LP+L Y Y LEP I++ ME+HH+KHHQTYV N N ALE + A + D
Sbjct: 6 LPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFADLPVEQLIQQLDRVP 65
Query: 77 IVQLGPALKFNGGGHINHALFWKMLNKNGGK-----PSDDLSNAIKASFGSLDKLKDELT 131
+ G AL+ N GGH NH++FW+++ + G+ PS +L +AI ++FGS D K +
Sbjct: 66 ADKKG-ALRNNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFE 124
Query: 132 AASVGIQGSGWGWLGYDPKSKSLKIATTANQD-PLF--ETTGLK--PLFGIDVWEHAYYL 186
A+ GSGW WL K L + +TANQD PL G+ P+ G+DVWEHAYYL
Sbjct: 125 DAAKTRFGSGWAWLVV--KDGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYL 182
Query: 187 QYKNVRPNYVKAIYDIMNWNYINELYAKAK 216
Y+N RP+Y+ A ++++NW+ +++ YA AK
Sbjct: 183 NYQNRRPDYLAAFWNVVNWDEVSKRYAAAK 212
>pdb|2CDY|A Chain A, Manganese Superoxide Dismutase (Mn-Sod) From Deinococcus
Radiodurans
pdb|2CDY|B Chain B, Manganese Superoxide Dismutase (Mn-Sod) From Deinococcus
Radiodurans
pdb|2CDY|C Chain C, Manganese Superoxide Dismutase (Mn-Sod) From Deinococcus
Radiodurans
pdb|2CDY|D Chain D, Manganese Superoxide Dismutase (Mn-Sod) From Deinococcus
Radiodurans
pdb|2CE4|A Chain A, Manganese Superoxide Dismutase (Mn-Sod) From Deinococcus
Radiodurans
pdb|2CE4|B Chain B, Manganese Superoxide Dismutase (Mn-Sod) From Deinococcus
Radiodurans
Length = 231
Score = 160 bits (405), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 127/210 (60%), Gaps = 20/210 (9%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAA-------VANNDASA 76
LP+L Y Y LEP I++ ME+HH+KHHQTYV N N ALE + A + D
Sbjct: 25 LPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFADLPVEQLIQQLDRVP 84
Query: 77 IVQLGPALKFNGGGHINHALFWKMLNKNGGK-----PSDDLSNAIKASFGSLDKLKDELT 131
+ G AL+ N GGH NH++FW+++ + G+ PS +L +AI ++FGS D K +
Sbjct: 85 ADKKG-ALRNNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFE 143
Query: 132 AASVGIQGSGWGWLGYDPKSKSLKIATTANQD-PLF--ETTGLK--PLFGIDVWEHAYYL 186
A+ GSGW WL K L + +TANQD PL G+ P+ G+DVWEHAYYL
Sbjct: 144 DAAKTRFGSGWAWLVV--KDGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYL 201
Query: 187 QYKNVRPNYVKAIYDIMNWNYINELYAKAK 216
Y+N RP+Y+ A ++++NW+ +++ YA AK
Sbjct: 202 NYQNRRPDYLAAFWNVVNWDEVSKRYAAAK 231
>pdb|3KKY|A Chain A, Structure Of Manganese Superoxide Dismutase From
Deinococcus Radiodurans In The Orthorhombic Space Group
P212121: A Case Study Of Mistaken Identity
pdb|3KKY|B Chain B, Structure Of Manganese Superoxide Dismutase From
Deinococcus Radiodurans In The Orthorhombic Space Group
P212121: A Case Study Of Mistaken Identity
Length = 211
Score = 160 bits (404), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/210 (42%), Positives = 127/210 (60%), Gaps = 20/210 (9%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAA-------VANNDASA 76
LP+L Y Y LEP I++ ME+HH+KHHQTYV N N ALE + A + D
Sbjct: 5 LPQLPYAYDALEPHIDARTMEIHHTKHHQTYVDNANKALEGTEFADLPVEQLIQQLDRVP 64
Query: 77 IVQLGPALKFNGGGHINHALFWKMLNKNGGK-----PSDDLSNAIKASFGSLDKLKDELT 131
+ G AL+ N GGH NH++FW+++ + G+ PS +L +AI ++FGS D K +
Sbjct: 65 ADKKG-ALRNNAGGHANHSMFWQIMGQGQGQNGANQPSGELLDAINSAFGSFDAFKQKFE 123
Query: 132 AASVGIQGSGWGWLGYDPKSKSLKIATTANQD-PLF--ETTGLK--PLFGIDVWEHAYYL 186
A+ GSGW WL K L + +TANQD PL G+ P+ G+DVWEHAYYL
Sbjct: 124 DAAKTRFGSGWAWLVV--KDGKLDVVSTANQDNPLMGEAIAGVSGTPILGVDVWEHAYYL 181
Query: 187 QYKNVRPNYVKAIYDIMNWNYINELYAKAK 216
Y+N RP+Y+ A ++++NW+ +++ YA AK
Sbjct: 182 NYQNRRPDYLAAFWNVVNWDEVSKRYAAAK 211
>pdb|1VEW|A Chain A, Manganese Superoxide Dismutase From Escherichia Coli
pdb|1VEW|B Chain B, Manganese Superoxide Dismutase From Escherichia Coli
pdb|1VEW|C Chain C, Manganese Superoxide Dismutase From Escherichia Coli
pdb|1VEW|D Chain D, Manganese Superoxide Dismutase From Escherichia Coli
pdb|1MMM|A Chain A, Distinct Metal Environment In Iron-Substituted Manganese
Superoxide Dismutase Provides A Structural Basis Of
Metal Specificity
pdb|1MMM|B Chain B, Distinct Metal Environment In Iron-Substituted Manganese
Superoxide Dismutase Provides A Structural Basis Of
Metal Specificity
pdb|1D5N|A Chain A, Crystal Structure Of E. Coli Mnsod At 100k
pdb|1D5N|B Chain B, Crystal Structure Of E. Coli Mnsod At 100k
pdb|1D5N|C Chain C, Crystal Structure Of E. Coli Mnsod At 100k
pdb|1D5N|D Chain D, Crystal Structure Of E. Coli Mnsod At 100k
pdb|3K9S|A Chain A, Crystal Structure Of The Peroxide-Bound Manganese
Superoxide Dismutase.
pdb|3K9S|B Chain B, Crystal Structure Of The Peroxide-Bound Manganese
Superoxide Dismutase.
pdb|3K9S|C Chain C, Crystal Structure Of The Peroxide-Bound Manganese
Superoxide Dismutase.
pdb|3K9S|D Chain D, Crystal Structure Of The Peroxide-Bound Manganese
Superoxide Dismutase.
pdb|3OT7|A Chain A, Escherichia Coli Apo-Manganese Superoxide Dismutase
pdb|3OT7|B Chain B, Escherichia Coli Apo-Manganese Superoxide Dismutase
pdb|3OT7|C Chain C, Escherichia Coli Apo-Manganese Superoxide Dismutase
pdb|3OT7|D Chain D, Escherichia Coli Apo-Manganese Superoxide Dismutase
Length = 205
Score = 155 bits (393), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 91/206 (44%), Positives = 117/206 (56%), Gaps = 17/206 (8%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG-- 81
LP L Y Y LEP + + ME+HH+KHHQTYV N NAALE L I +L
Sbjct: 4 LPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQL 63
Query: 82 PA-----LKFNGGGHINHALFWKMLNKNGGKPSDDLSNAIKASFGSLDKLKDELTAASVG 136
PA L+ N GGH NH+LFWK L K G DL AI+ FGS+D K E A+
Sbjct: 64 PADKKTVLRNNAGGHANHSLFWKGL-KKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAAS 122
Query: 137 IQGSGWGWLGYDPKSKSLKIATTANQD-PLF-----ETTGLKPLFGIDVWEHAYYLQYKN 190
GSGW WL K L + +TANQD PL +G P+ G+DVWEHAYYL+++N
Sbjct: 123 RFGSGWAWLVL--KGDKLAVVSTANQDSPLMGEAISGASGF-PIMGLDVWEHAYYLKFQN 179
Query: 191 VRPNYVKAIYDIMNWNYINELYAKAK 216
RP+Y+K ++++NW+ +A K
Sbjct: 180 RRPDYIKEFWNVVNWDEAAARFAAKK 205
>pdb|1EN5|A Chain A, Crystal Structure Analysis Of The E. Coli Manganese
Superoxide Dismutase Y34f Mutant
pdb|1EN5|B Chain B, Crystal Structure Analysis Of The E. Coli Manganese
Superoxide Dismutase Y34f Mutant
pdb|1EN5|C Chain C, Crystal Structure Analysis Of The E. Coli Manganese
Superoxide Dismutase Y34f Mutant
pdb|1EN5|D Chain D, Crystal Structure Analysis Of The E. Coli Manganese
Superoxide Dismutase Y34f Mutant
Length = 205
Score = 155 bits (391), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 117/206 (56%), Gaps = 17/206 (8%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG-- 81
LP L Y Y LEP + + ME+HH+KHHQT+V N NAALE L I +L
Sbjct: 4 LPSLPYAYDALEPHFDKQTMEIHHTKHHQTFVNNANAALESLPEFANLPVEELITKLDQL 63
Query: 82 PA-----LKFNGGGHINHALFWKMLNKNGGKPSDDLSNAIKASFGSLDKLKDELTAASVG 136
PA L+ N GGH NH+LFWK L K G DL AI+ FGS+D K E A+
Sbjct: 64 PADKKTVLRNNAGGHANHSLFWKGL-KKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAAS 122
Query: 137 IQGSGWGWLGYDPKSKSLKIATTANQD-PLF-----ETTGLKPLFGIDVWEHAYYLQYKN 190
GSGW WL K L + +TANQD PL +G P+ G+DVWEHAYYL+++N
Sbjct: 123 RFGSGWAWLVL--KGDKLAVVSTANQDSPLMGEAISGASGF-PIMGLDVWEHAYYLKFQN 179
Query: 191 VRPNYVKAIYDIMNWNYINELYAKAK 216
RP+Y+K ++++NW+ +A K
Sbjct: 180 RRPDYIKEFWNVVNWDEAAARFAAKK 205
>pdb|1I0H|A Chain A, Crystal Structure Of The E. Coli Manganese Superoxide
Dismutase Mutant Y174f At 1.35 Angstroms Resolution.
pdb|1I0H|B Chain B, Crystal Structure Of The E. Coli Manganese Superoxide
Dismutase Mutant Y174f At 1.35 Angstroms Resolution.
pdb|1IX9|A Chain A, Crystal Structure Of The E. Coli Manganase(Iii) Superoxide
Dismutase Mutant Y174f At 0.90 Angstroms Resolution.
pdb|1IX9|B Chain B, Crystal Structure Of The E. Coli Manganase(Iii) Superoxide
Dismutase Mutant Y174f At 0.90 Angstroms Resolution.
pdb|1IXB|A Chain A, Crystal Structure Of The E. Coli Manganese(Ii) Superoxide
Dismutase Mutant Y174f At 0.90 Angstroms Resolution.
pdb|1IXB|B Chain B, Crystal Structure Of The E. Coli Manganese(Ii) Superoxide
Dismutase Mutant Y174f At 0.90 Angstroms Resolution.
pdb|1ZLZ|A Chain A, Re-Evaluation Of The Low-Temperature Azide In Mn-Dependent
Superoxide Dismutase
pdb|1ZLZ|B Chain B, Re-Evaluation Of The Low-Temperature Azide In Mn-Dependent
Superoxide Dismutase
Length = 205
Score = 155 bits (391), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 117/206 (56%), Gaps = 17/206 (8%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG-- 81
LP L Y Y LEP + + ME+HH+KHHQTYV N NAALE L I +L
Sbjct: 4 LPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQL 63
Query: 82 PA-----LKFNGGGHINHALFWKMLNKNGGKPSDDLSNAIKASFGSLDKLKDELTAASVG 136
PA L+ N GGH NH+LFWK L K G DL AI+ FGS+D K E A+
Sbjct: 64 PADKKTVLRNNAGGHANHSLFWKGL-KKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAAS 122
Query: 137 IQGSGWGWLGYDPKSKSLKIATTANQD-PLF-----ETTGLKPLFGIDVWEHAYYLQYKN 190
GSGW WL K L + +TANQD PL +G P+ G+DVWEHAY+L+++N
Sbjct: 123 RFGSGWAWLVL--KGDKLAVVSTANQDSPLMGEAISGASGF-PIMGLDVWEHAYFLKFQN 179
Query: 191 VRPNYVKAIYDIMNWNYINELYAKAK 216
RP+Y+K ++++NW+ +A K
Sbjct: 180 RRPDYIKEFWNVVNWDEAAARFAAKK 205
>pdb|1EN4|A Chain A, Crystal Structure Analysis Of The E. Coli Manganese
Superoxide Dismutase Q146h Mutant
pdb|1EN4|B Chain B, Crystal Structure Analysis Of The E. Coli Manganese
Superoxide Dismutase Q146h Mutant
pdb|1EN4|C Chain C, Crystal Structure Analysis Of The E. Coli Manganese
Superoxide Dismutase Q146h Mutant
pdb|1EN4|D Chain D, Crystal Structure Analysis Of The E. Coli Manganese
Superoxide Dismutase Q146h Mutant
Length = 205
Score = 154 bits (388), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 116/206 (56%), Gaps = 17/206 (8%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG-- 81
LP L Y Y LEP + + ME+HH+KHHQTYV N NAALE L I +L
Sbjct: 4 LPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQL 63
Query: 82 PA-----LKFNGGGHINHALFWKMLNKNGGKPSDDLSNAIKASFGSLDKLKDELTAASVG 136
PA L+ N GGH NH+LFWK L K G DL AI+ FGS+D K E A+
Sbjct: 64 PADKKTVLRNNAGGHANHSLFWKGL-KKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAAS 122
Query: 137 IQGSGWGWLGYDPKSKSLKIATTANQD-PLF-----ETTGLKPLFGIDVWEHAYYLQYKN 190
GSGW WL K L + +TAN D PL +G P+ G+DVWEHAYYL+++N
Sbjct: 123 RFGSGWAWLVL--KGDKLAVVSTANHDSPLMGEAISGASGF-PIMGLDVWEHAYYLKFQN 179
Query: 191 VRPNYVKAIYDIMNWNYINELYAKAK 216
RP+Y+K ++++NW+ +A K
Sbjct: 180 RRPDYIKEFWNVVNWDEAAARFAAKK 205
>pdb|1EN6|A Chain A, Crystal Structure Analysis Of The E. Coli Manganese
Superoxide Dismutase Q146l Mutant
pdb|1EN6|B Chain B, Crystal Structure Analysis Of The E. Coli Manganese
Superoxide Dismutase Q146l Mutant
pdb|1EN6|C Chain C, Crystal Structure Analysis Of The E. Coli Manganese
Superoxide Dismutase Q146l Mutant
pdb|1EN6|D Chain D, Crystal Structure Analysis Of The E. Coli Manganese
Superoxide Dismutase Q146l Mutant
Length = 205
Score = 152 bits (385), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 116/206 (56%), Gaps = 17/206 (8%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG-- 81
LP L Y Y LEP + + ME+HH+KHHQTYV N NAALE L I +L
Sbjct: 4 LPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQL 63
Query: 82 PA-----LKFNGGGHINHALFWKMLNKNGGKPSDDLSNAIKASFGSLDKLKDELTAASVG 136
PA L+ N GGH NH+LFWK L K G DL AI+ FGS+D K E A+
Sbjct: 64 PADKKTVLRNNAGGHANHSLFWKGL-KKGTTLQGDLKAAIERDFGSVDNFKAEFEKAAAS 122
Query: 137 IQGSGWGWLGYDPKSKSLKIATTANQD-PLF-----ETTGLKPLFGIDVWEHAYYLQYKN 190
GSGW WL K L + +TAN D PL +G P+ G+DVWEHAYYL+++N
Sbjct: 123 RFGSGWAWLVL--KGDKLAVVSTANLDSPLMGEAISGASGF-PIMGLDVWEHAYYLKFQN 179
Query: 191 VRPNYVKAIYDIMNWNYINELYAKAK 216
RP+Y+K ++++NW+ +A K
Sbjct: 180 RRPDYIKEFWNVVNWDEAAARFAAKK 205
>pdb|1DT0|A Chain A, Cloning, Sequence, And Crystallographic Structure Of
Recombinant Iron Superoxide Dismutase From Pseudomonas
Ovalis
pdb|1DT0|B Chain B, Cloning, Sequence, And Crystallographic Structure Of
Recombinant Iron Superoxide Dismutase From Pseudomonas
Ovalis
pdb|1DT0|C Chain C, Cloning, Sequence, And Crystallographic Structure Of
Recombinant Iron Superoxide Dismutase From Pseudomonas
Ovalis
Length = 197
Score = 152 bits (384), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 111/194 (57%), Gaps = 8/194 (4%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG 81
ELP L Y + L+P I+ E +E HH KHH TYV N N + + IV+
Sbjct: 2 FELPPLPYAHDALQPHISKETLEFHHDKHHNTYVVNLNNLVPGTE--FEGKTLEEIVKTS 59
Query: 82 PALKFNGGGHI-NHALFWKMLNKN-GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQG 139
FN + NH +W L+ N GG+P+ L++AI A+FGS DK K+E T SVG G
Sbjct: 60 SGGIFNNAAQVWNHTFYWNCLSPNAGGQPTGALADAINAAFGSFDKFKEEFTKTSVGTFG 119
Query: 140 SGWGWLGYDPKSKSLKIATTANQD-PLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKA 198
SGWGWL SL +A+T PL T G PL DVWEHAYY+ Y+N+RP YV+A
Sbjct: 120 SGWGWL-VKKADGSLALASTIGAGCPL--TIGDTPLLTCDVWEHAYYIDYRNLRPKYVEA 176
Query: 199 IYDIMNWNYINELY 212
++++NW ++ E +
Sbjct: 177 FWNLVNWAFVAEQF 190
>pdb|1I08|A Chain A, Crystal Structure Analysis Of The H30a Mutant Of Manganese
Superoxide Dismutase From E. Coli
pdb|1I08|B Chain B, Crystal Structure Analysis Of The H30a Mutant Of Manganese
Superoxide Dismutase From E. Coli
pdb|1I08|C Chain C, Crystal Structure Analysis Of The H30a Mutant Of Manganese
Superoxide Dismutase From E. Coli
pdb|1I08|D Chain D, Crystal Structure Analysis Of The H30a Mutant Of Manganese
Superoxide Dismutase From E. Coli
Length = 205
Score = 152 bits (384), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 116/206 (56%), Gaps = 17/206 (8%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG-- 81
LP L Y Y LEP + + ME+HH+K HQTYV N NAALE L I +L
Sbjct: 4 LPSLPYAYDALEPHFDKQTMEIHHTKAHQTYVNNANAALESLPEFANLPVEELITKLDQL 63
Query: 82 PA-----LKFNGGGHINHALFWKMLNKNGGKPSDDLSNAIKASFGSLDKLKDELTAASVG 136
PA L+ N GGH NH+LFWK L K G DL AI+ FGS+D K E A+
Sbjct: 64 PADKKTVLRNNAGGHANHSLFWKGLKK-GTTLQGDLKAAIERDFGSVDNFKAEFEKAAAS 122
Query: 137 IQGSGWGWLGYDPKSKSLKIATTANQD-PLFE-----TTGLKPLFGIDVWEHAYYLQYKN 190
GSGW WL K L + +TANQD PL +G P+ G+DVWEHAYYL+++N
Sbjct: 123 RFGSGWAWLVL--KGDKLAVVSTANQDSPLMGEAISGASGF-PIMGLDVWEHAYYLKFQN 179
Query: 191 VRPNYVKAIYDIMNWNYINELYAKAK 216
RP+Y+K ++++NW+ +A K
Sbjct: 180 RRPDYIKEFWNVVNWDEAAARFAAKK 205
>pdb|3H1S|A Chain A, Crystal Structure Of Superoxide Dismutase From Francisella
Tularensis Subsp. Tularensis Schu S4
pdb|3H1S|B Chain B, Crystal Structure Of Superoxide Dismutase From Francisella
Tularensis Subsp. Tularensis Schu S4
Length = 195
Score = 149 bits (377), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 112/194 (57%), Gaps = 7/194 (3%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG 81
ELPKL Y LE I+ E +E H+ KHHQTYVTN N +E + N IV+
Sbjct: 6 FELPKLPYAVDALESTISKETIEYHYGKHHQTYVTNLNNLVEGTEHDGRN--LEEIVKTS 63
Query: 82 PALKFNGGGHI-NHALFWKMLNKNGGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGS 140
FN + NH +W L N + S L A+ +FGS++ K++ + A++ GS
Sbjct: 64 NGGIFNNAAQVFNHTFYWNCLTPNKTEASSQLKAALIETFGSVENFKEQFSKAAIATFGS 123
Query: 141 GWGWLGYDPKSKSLKIATTANQD-PLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAI 199
GW WL + + K L+I TT+N PL T KPL DVWEHAYY+ Y+N RP YV+A+
Sbjct: 124 GWAWLVKNTEGK-LEIVTTSNAGCPL--TENKKPLLTFDVWEHAYYIDYRNARPKYVEAL 180
Query: 200 YDIMNWNYINELYA 213
+DI+NW +++E +A
Sbjct: 181 WDIVNWQFVSEQFA 194
>pdb|4F2N|A Chain A, Crystal Structure Of Iron Superoxide Dismutase From
Leishmania Major
pdb|4F2N|B Chain B, Crystal Structure Of Iron Superoxide Dismutase From
Leishmania Major
pdb|4F2N|C Chain C, Crystal Structure Of Iron Superoxide Dismutase From
Leishmania Major
pdb|4F2N|D Chain D, Crystal Structure Of Iron Superoxide Dismutase From
Leishmania Major
pdb|4F2N|E Chain E, Crystal Structure Of Iron Superoxide Dismutase From
Leishmania Major
pdb|4F2N|F Chain F, Crystal Structure Of Iron Superoxide Dismutase From
Leishmania Major
pdb|4F2N|G Chain G, Crystal Structure Of Iron Superoxide Dismutase From
Leishmania Major
pdb|4F2N|H Chain H, Crystal Structure Of Iron Superoxide Dismutase From
Leishmania Major
pdb|4F2N|I Chain I, Crystal Structure Of Iron Superoxide Dismutase From
Leishmania Major
pdb|4F2N|J Chain J, Crystal Structure Of Iron Superoxide Dismutase From
Leishmania Major
pdb|4F2N|K Chain K, Crystal Structure Of Iron Superoxide Dismutase From
Leishmania Major
pdb|4F2N|L Chain L, Crystal Structure Of Iron Superoxide Dismutase From
Leishmania Major
Length = 230
Score = 149 bits (376), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 82/213 (38%), Positives = 118/213 (55%), Gaps = 20/213 (9%)
Query: 14 TSPILQGPIELPKLDYGYKD-LEPVINSEIMELHHSKHHQTYVTNYNA--------ALEK 64
T P L+ P ELP L + YKD ++PV++ +ELH+SKHH YV N +E+
Sbjct: 25 TLPHLRYPAELPTLGFNYKDGIQPVMSPRQLELHYSKHHSAYVDKLNTLGKGYEGKTIEE 84
Query: 65 LKAAVANNDASAIVQLGPALKFNGGG-HINHALFWKMLNKNGGKPSDDLSNAIKASFGSL 123
+ A + S ++ FN H NH+ FWK L+ G L NAI FGS+
Sbjct: 85 IILATTGINESKVM-------FNQAAQHFNHSFFWKCLSPGGKPMPKTLENAIAKQFGSV 137
Query: 124 DKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQD-PLFETTGLKPLFGIDVWEH 182
D A V GSGW WL DP++K L I +T+N PL T+GL+P+F DVWEH
Sbjct: 138 DDFMVSFQQAGVNNFGSGWTWLCVDPQTKELLIDSTSNAGCPL--TSGLRPIFTADVWEH 195
Query: 183 AYYLQYKNVRPNYVKAIYDIMNWNYINELYAKA 215
AYY ++N R +Y+K ++ I++W ++ +Y +A
Sbjct: 196 AYYKDFENRRADYLKELWQIVDWEFVCHMYERA 228
>pdb|3SDP|A Chain A, The 2.1 Angstroms Resolution Structure Of Iron Superoxide
Dismutase From Pseudomonas Ovalis
pdb|3SDP|B Chain B, The 2.1 Angstroms Resolution Structure Of Iron Superoxide
Dismutase From Pseudomonas Ovalis
Length = 195
Score = 147 bits (370), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 108/191 (56%), Gaps = 6/191 (3%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG 81
ELP L Y + L+P I+ E +E HH KHH TYV N N L IV+
Sbjct: 2 FELPPLPYAHDALQPHISKETLEYHHDKHHNTYVVNLNN-LVPGTPEFEGKTLEEIVKSS 60
Query: 82 PALKFNGGGHI-NHALFWKMLNKN-GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQG 139
FN + NH +W L+ + GG+P+ L++AI A+FGS DK K+E T SVG G
Sbjct: 61 SGGIFNNAAQVWNHTFYWNCLSPDAGGQPTGALADAINAAFGSFDKFKEEFTKTSVGTFG 120
Query: 140 SGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAI 199
SGW WL S +L +T PL T+G PL DVWEHAYY+ Y+N+RP YV+A
Sbjct: 121 SGWAWLVKADGSLAL-CSTIGAGAPL--TSGDTPLLTCDVWEHAYYIDYRNLRPKYVEAF 177
Query: 200 YDIMNWNYINE 210
++++NW ++ E
Sbjct: 178 WNLVNWAFVAE 188
>pdb|3AK1|A Chain A, Superoxide Dismutase From Aeropyrum Pernix K1, Apo-Form
pdb|3AK1|B Chain B, Superoxide Dismutase From Aeropyrum Pernix K1, Apo-Form
pdb|3AK1|C Chain C, Superoxide Dismutase From Aeropyrum Pernix K1, Apo-Form
pdb|3AK1|D Chain D, Superoxide Dismutase From Aeropyrum Pernix K1, Apo-Form
pdb|3AK2|A Chain A, Superoxide Dismutase From Aeropyrum Pernix K1, Mn-Bound
Form
pdb|3AK2|B Chain B, Superoxide Dismutase From Aeropyrum Pernix K1, Mn-Bound
Form
pdb|3AK2|C Chain C, Superoxide Dismutase From Aeropyrum Pernix K1, Mn-Bound
Form
pdb|3AK2|D Chain D, Superoxide Dismutase From Aeropyrum Pernix K1, Mn-Bound
Form
pdb|3AK3|A Chain A, Superoxide Dismutase From Aeropyrum Pernix K1, Fe-Bound
Form
pdb|3AK3|B Chain B, Superoxide Dismutase From Aeropyrum Pernix K1, Fe-Bound
Form
pdb|3AK3|C Chain C, Superoxide Dismutase From Aeropyrum Pernix K1, Fe-Bound
Form
pdb|3AK3|D Chain D, Superoxide Dismutase From Aeropyrum Pernix K1, Fe-Bound
Form
Length = 214
Score = 146 bits (368), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 114/196 (58%), Gaps = 4/196 (2%)
Query: 23 ELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGP 82
ELP L Y Y LEP I EIM+LHH KHH TYV NAALEK++ + + +
Sbjct: 8 ELPPLPYNYNALEPYIIEEIMKLHHQKHHNTYVKGANAALEKIEKHLKGEIQIDVRAVMR 67
Query: 83 ALKFNGGGHINHALFWKML---NKNGGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQG 139
FN GHI H +FW + K GG P +++ I+ FG +K K +AA+ ++G
Sbjct: 68 DFSFNYAGHIMHTIFWPNMAPPGKGGGTPGGRVADLIEKQFGGFEKFKALFSAAAKTVEG 127
Query: 140 SGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAI 199
GWG L +DP ++ L+I + L T GL P+ IDVWEHAYYLQYKN R +YV+
Sbjct: 128 VGWGVLAFDPLTEELRILQVEKHNVLM-TAGLVPILVIDVWEHAYYLQYKNDRGSYVENW 186
Query: 200 YDIMNWNYINELYAKA 215
++++NW+ + + +A
Sbjct: 187 WNVVNWDDVEKRLEQA 202
>pdb|4H3E|A Chain A, Crystal Structure Of A Putative Iron Superoxide Dismutase
From Trypanosoma Cruzi Bound To Iron
pdb|4H3E|B Chain B, Crystal Structure Of A Putative Iron Superoxide Dismutase
From Trypanosoma Cruzi Bound To Iron
Length = 241
Score = 143 bits (361), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 117/208 (56%), Gaps = 20/208 (9%)
Query: 20 GPIELPKLDYGYKD-LEPVINSEIMELHHSKHHQTYVTNYNA---------ALEKLKAAV 69
P ELPKL + +KD PV + MELH++KHH+ YV NA ++E++ AV
Sbjct: 40 APAELPKLGFNWKDGCAPVFSPRQMELHYTKHHKAYVDKLNALAGTTYDGKSIEEIILAV 99
Query: 70 ANNDASAIVQLGPALKFNGGGHINHALFWKMLNKNGGKPSDDLSNAIKASFGSLDKLKDE 129
AN+ L H NH +++ + NG +A+ A FGS+++ KD
Sbjct: 100 ANDAEKK------GLFNQAAQHFNHTFYFRCITPNGKAMPKSFESAVTAQFGSVEQFKDA 153
Query: 130 LTAASVGIQGSGWGWLGYDPKSKS-LKIATTANQD-PLFETTGLKPLFGIDVWEHAYYLQ 187
A V GSGW WL DP +K+ L I T+N PL T GL+P+ +DVWEHAYY
Sbjct: 154 FVQAGVNNFGSGWTWLCVDPSNKNQLVIDNTSNAGCPL--TKGLRPVLAVDVWEHAYYKD 211
Query: 188 YKNVRPNYVKAIYDIMNWNYINELYAKA 215
++N RP+Y+K I+ +++W ++ +++A+A
Sbjct: 212 FENRRPDYLKEIWSVIDWEFVAKMHAQA 239
>pdb|1MA1|A Chain A, Structure And Properties Of The Atypical Iron Superoxide
Dismutase From Methanobacterium Thermoautotrophicum
pdb|1MA1|B Chain B, Structure And Properties Of The Atypical Iron Superoxide
Dismutase From Methanobacterium Thermoautotrophicum
pdb|1MA1|C Chain C, Structure And Properties Of The Atypical Iron Superoxide
Dismutase From Methanobacterium Thermoautotrophicum
pdb|1MA1|D Chain D, Structure And Properties Of The Atypical Iron Superoxide
Dismutase From Methanobacterium Thermoautotrophicum
pdb|1MA1|E Chain E, Structure And Properties Of The Atypical Iron Superoxide
Dismutase From Methanobacterium Thermoautotrophicum
pdb|1MA1|F Chain F, Structure And Properties Of The Atypical Iron Superoxide
Dismutase From Methanobacterium Thermoautotrophicum
Length = 205
Score = 142 bits (359), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 111/197 (56%), Gaps = 12/197 (6%)
Query: 23 ELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGP 82
ELP+L Y Y LEP I+ E + +HH KHHQ YV NA L KL A ++ I
Sbjct: 10 ELPELPYPYDALEPHISREQLTIHHQKHHQAYVDGANALLRKLDEARESDTDVDIKAALK 69
Query: 83 ALKFNGGGHINHALFWKML---NKNGGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQG 139
L F+ GG++ H FW + ++ GG+PS L+ I+ FGS ++ + E + A++ +G
Sbjct: 70 ELSFHVGGYVLHLFFWGNMGPADECGGEPSGKLAEYIEKDFGSFERFRKEFSQAAISAEG 129
Query: 140 SGWGWLGYDPKSKSLKIATT----ANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNY 195
SGW L Y ++ L I N P F + L +DVWEHAYY+ Y+NVRP+Y
Sbjct: 130 SGWAVLTYCQRTDRLFIMQVEKHNVNVIPHF-----RILLVLDVWEHAYYIDYRNVRPDY 184
Query: 196 VKAIYDIMNWNYINELY 212
V+A ++I+NW + + +
Sbjct: 185 VEAFWNIVNWKEVEKRF 201
>pdb|3RN4|A Chain A, Crystal Structure Of Iron-Substituted Sod2 From
Saccharomyces Cerevisiae
Length = 215
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 119/207 (57%), Gaps = 14/207 (6%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEK-------LKAAVANNDA 74
+ LP L + + LEP I+ +I ELH++KHHQTYV +N A+++ L + +A
Sbjct: 10 VTLPDLKWDFGALEPYISGQINELHYTKHHQTYVNGFNTAVDQFQELSDLLAKEPSPANA 69
Query: 75 SAIVQLGPALKFNGGGHINHALFWKML---NKNGGKP-SDDLSNAIKASFGSLDKLKDEL 130
++ + +KF+GGG NH LFW+ L ++ GG+P + L+ AI FGSLD+L
Sbjct: 70 RKMIAIQQNIKFHGGGFTNHCLFWENLAPESQGGGEPPTGALAKAIDEQFGSLDELIKLT 129
Query: 131 TAASVGIQGSGWGWLGYD-PKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYK 189
G+QGSGW ++ + L + T NQD + T L PL ID WEHAYYLQY+
Sbjct: 130 NTKLAGVQGSGWAFIVKNLSNGGKLDVVQTYNQDTV--TGPLVPLVAIDAWEHAYYLQYQ 187
Query: 190 NVRPNYVKAIYDIMNWNYINELYAKAK 216
N + +Y KAI++++NW + + K
Sbjct: 188 NKKADYFKAIWNVVNWKEASRRFDAGK 214
>pdb|3ESF|A Chain A, Crystal Structure Of The Enzyme Fe-Superoxide Dismutase
Tbsodb2 From Trypanosoma Brucei
pdb|3ESF|B Chain B, Crystal Structure Of The Enzyme Fe-Superoxide Dismutase
Tbsodb2 From Trypanosoma Brucei
pdb|3ESF|C Chain C, Crystal Structure Of The Enzyme Fe-Superoxide Dismutase
Tbsodb2 From Trypanosoma Brucei
pdb|3ESF|D Chain D, Crystal Structure Of The Enzyme Fe-Superoxide Dismutase
Tbsodb2 From Trypanosoma Brucei
Length = 197
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 77/196 (39%), Positives = 108/196 (55%), Gaps = 4/196 (2%)
Query: 22 IELPKLDYGYKDLEPV-INSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQL 80
+P L +GY L I+ E + H+ KHH YVT NAA A+A I++
Sbjct: 3 FSIPPLPWGYDGLAAKGISKEQVTFHYDKHHMGYVTKLNAAANS-NPALAAKSVEEIIRT 61
Query: 81 GPALKFNGGGHI-NHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQ 138
FN I NH +W+ ++ NGG +PS L+ AI+ASFGS K K+E T A+VG
Sbjct: 62 EKGPIFNLAAQIFNHNFYWESMSPNGGGEPSGKLAEAIRASFGSFAKFKEEFTNAAVGHF 121
Query: 139 GSGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKA 198
GSGW WL D +K LK+ T + LKP+ DVWEHAYY+ YKN RP YV+
Sbjct: 122 GSGWAWLVQDTTTKKLKVFQTHDAGCPLTEADLKPILTCDVWEHAYYIDYKNDRPAYVQT 181
Query: 199 IYDIMNWNYINELYAK 214
++++NW++ + +
Sbjct: 182 FWNVVNWDHAENQFTR 197
>pdb|3TJT|A Chain A, Crystal Structure Analysis Of The Superoxide Dismutase
From Clostridium Difficile
Length = 208
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 107/200 (53%), Gaps = 11/200 (5%)
Query: 27 LDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLK-------AAVANNDASAIVQ 79
L Y Y LEP I+ E M+LHH KH+Q YV NAALEK + N S
Sbjct: 11 LPYAYDALEPYIDKETMKLHHDKHYQAYVDKLNAALEKYPELYNYSLCELLQNLDSLPKD 70
Query: 80 LGPALKFNGGGHINHALFWKMLNKNGGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQG 139
+ ++ N GG NH F+ ++ PS+ L AI FGS +K K E +++ + G
Sbjct: 71 IATTVRNNAGGAYNHKFFFDIMTPEKTIPSESLKEAIDRDFGSFEKFKQEFQKSALDVFG 130
Query: 140 SGWGWLGYDPKSKSLKIATTANQD-PLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKA 198
SGW WL K L I TT NQD P+ + L P+ G+DVWEHAYYL+Y+N R Y+
Sbjct: 131 SGWAWL-VATKDGKLSIMTTPNQDSPV--SKNLTPIIGLDVWEHAYYLKYQNRRNEYIDN 187
Query: 199 IYDIMNWNYINELYAKAKSS 218
++++NWN E Y KS
Sbjct: 188 WFNVVNWNGALENYKNLKSQ 207
>pdb|3BFR|A Chain A, The Crystal Structure Of Sod2 From Saccharomyces
Cerevisiae
Length = 215
Score = 141 bits (355), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 119/207 (57%), Gaps = 14/207 (6%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEK-------LKAAVANNDA 74
+ LP L + + LEP I+ +I ELH++KHHQTYV +N A+++ L + +A
Sbjct: 10 VTLPDLKWDFGALEPYISGQINELHYTKHHQTYVNGFNTAVDQFQELSDLLAKEPSPANA 69
Query: 75 SAIVQLGPALKFNGGGHINHALFWKML---NKNGGKP-SDDLSNAIKASFGSLDKLKDEL 130
++ + +KF+GGG NH LFW+ L ++ GG+P + L+ AI FGSLD+L
Sbjct: 70 RKMIAIQQNIKFHGGGFTNHCLFWENLAPESQGGGEPPTGALAKAIDEQFGSLDELIKLT 129
Query: 131 TAASVGIQGSGWGWLGYD-PKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYK 189
G+QGSGW ++ + L + T NQD + T L PL ID WEHAYYLQY+
Sbjct: 130 NTKLAGVQGSGWAFIVKNLSNGGKLDVVQTYNQDTV--TGPLVPLVAIDAWEHAYYLQYQ 187
Query: 190 NVRPNYVKAIYDIMNWNYINELYAKAK 216
N + +Y KAI++++NW + + K
Sbjct: 188 NKKADYFKAIWNVVNWKEASRRFDAGK 214
>pdb|1ZA5|A Chain A, Q69h-Fesod
pdb|1ZA5|B Chain B, Q69h-Fesod
Length = 192
Score = 138 bits (347), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 104/189 (55%), Gaps = 6/189 (3%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG 81
ELP L Y L P I++E +E H+ KHHQTYVTN N ++ A I++
Sbjct: 2 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKG--TAFEGKSLEEIIRSS 59
Query: 82 PALKFNGGGHI-NHALFWKMLNKN-GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQG 139
FN H+ NH +W L N GG+P+ ++ AI ASFGS K + T A++ G
Sbjct: 60 EGGVFNNAAHVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFG 119
Query: 140 SGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAI 199
SGW WL + K ++T+ PL TT PL +DVWEHAYY+ Y+N RP Y++
Sbjct: 120 SGWTWLVKNSDGKLAIVSTSNAGTPL--TTDATPLLTVDVWEHAYYIDYRNARPGYLEHF 177
Query: 200 YDIMNWNYI 208
+ ++NW ++
Sbjct: 178 WALVNWEFV 186
>pdb|2CW2|A Chain A, Crystal Structure Of Superoxide Dismutase From P. Marinus
pdb|2CW2|B Chain B, Crystal Structure Of Superoxide Dismutase From P. Marinus
Length = 226
Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 120/218 (55%), Gaps = 19/218 (8%)
Query: 12 IVTSPILQ-----------GPIELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNA 60
+ T+P+L+ GP + P L Y LEP +++E + HH KHHQTYV N+
Sbjct: 12 LATTPVLRMGLARCFSSVTGPFQCPPLPYVKNALEPHMSAETLTYHHDKHHQTYVDTLNS 71
Query: 61 ALEKLKAAVANNDASAIVQLGPALKFNGGGHI-NHALFWKMLNKNGG-KPSDDLSNAIKA 118
+ + +A+ I++ FN + NH F+ L NGG +P+ ++ I
Sbjct: 72 -IAAENSTIASKTLEQIIKTETGKPFNQAAQVYNHTFFFNNLAPNGGGEPTGKIAELITR 130
Query: 119 SFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQ-DPLFETTGLKPLFGI 177
FGS +K K++ +AA+VG GSGW WL D LKI + +P+ E+ PL I
Sbjct: 131 DFGSFEKFKEDFSAAAVGHFGSGWVWLIAD--DGKLKIVQGHDAGNPIRESK--TPLMNI 186
Query: 178 DVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKA 215
DVWEHAYY+ Y+N R YVK ++++NW+++N+ AKA
Sbjct: 187 DVWEHAYYIDYRNARAQYVKNYWNLVNWDFVNDNVAKA 224
>pdb|3EVK|A Chain A, Crystal Structure Of The Metal-Bound Superoxide Dismutase
From Pyrobaculum Aerophilum
pdb|3EVK|B Chain B, Crystal Structure Of The Metal-Bound Superoxide Dismutase
From Pyrobaculum Aerophilum
pdb|3EVK|C Chain C, Crystal Structure Of The Metal-Bound Superoxide Dismutase
From Pyrobaculum Aerophilum
pdb|3EVK|D Chain D, Crystal Structure Of The Metal-Bound Superoxide Dismutase
From Pyrobaculum Aerophilum
Length = 222
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 114/198 (57%), Gaps = 10/198 (5%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKL---KAAVANNDASAIVQL 80
LP L Y Y LEP I++EIM+LHH KHHQ YV NAALEKL + A D A+++
Sbjct: 20 LPPLPYAYNALEPYISAEIMQLHHQKHHQGYVNGANAALEKLEKFRKGEAQIDIRAVLR- 78
Query: 81 GPALKFNGGGHINHALFWKML---NKNGGKPSDDLSNAIKASFGSLDKLKDELTAASVGI 137
L F+ GHI H++FW + K GGKP +++ I FGS +K K+E + A+ +
Sbjct: 79 --DLSFHLNGHILHSIFWPNMAPPGKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNV 136
Query: 138 QGSGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVK 197
+G GW L Y+P + L I + L + L +DVWEHAYYLQYKN R +YV
Sbjct: 137 EGVGWAILVYEPLEEQLLILQIEKHN-LMHAADAQVLLALDVWEHAYYLQYKNDRGSYVD 195
Query: 198 AIYDIMNWNYINELYAKA 215
++++NW+ + KA
Sbjct: 196 NWWNVVNWDDVERRLQKA 213
>pdb|3LSU|A Chain A, Crystal Structure Of Sod2 From Saccharomyces Cerevisiae
pdb|3LSU|B Chain B, Crystal Structure Of Sod2 From Saccharomyces Cerevisiae
pdb|3LSU|C Chain C, Crystal Structure Of Sod2 From Saccharomyces Cerevisiae
pdb|3LSU|D Chain D, Crystal Structure Of Sod2 From Saccharomyces Cerevisiae
Length = 207
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 75/196 (38%), Positives = 112/196 (57%), Gaps = 14/196 (7%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEK-------LKAAVANNDA 74
+ LP L + + LEP I+ +I ELH++ HHQTYV +N A+++ L + +A
Sbjct: 2 VTLPDLXWDFGALEPYISGQINELHYTXHHQTYVNGFNTAVDQFQELSDLLAXEPSPANA 61
Query: 75 SAIVQLGPALKFNGGGHINHALFWKML---NKNGGKP-SDDLSNAIKASFGSLDKLKDEL 130
++ + + F+GGG NH LFW+ L ++ GG+P + L+ AI FGSLD+L
Sbjct: 62 RXMIAIQQNIXFHGGGFTNHCLFWENLAPESQGGGEPPTGALAXAIDEQFGSLDELIXLT 121
Query: 131 TAASVGIQGSGWGWLGYD-PKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYK 189
G+QGSGW ++ + L + T NQD + T L PL ID WEHAYYLQY+
Sbjct: 122 NTXLAGVQGSGWAFIVXNLSNGGXLDVVQTYNQDTV--TGPLVPLVAIDAWEHAYYLQYQ 179
Query: 190 NVRPNYVKAIYDIMNW 205
N +Y AI++++NW
Sbjct: 180 NXXADYFXAIWNVVNW 195
>pdb|2A03|A Chain A, Superoxide Dismutase Protein From Plasmodium Berghei
pdb|2A03|B Chain B, Superoxide Dismutase Protein From Plasmodium Berghei
Length = 206
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/191 (37%), Positives = 107/191 (56%), Gaps = 5/191 (2%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG 81
I LPKL Y L P I+ E + H++KHH YV N ++ +AN + I++
Sbjct: 11 ITLPKLKYALNALSPHISEETLSFHYNKHHAGYVNKLNGLIKD--TPLANKSLTDILKES 68
Query: 82 PALKFNGGGHI-NHALFWKMLNKN-GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQG 139
FN I NH+ +W + N GG+P ++ I+ FGS + KD+ + G G
Sbjct: 69 TGAIFNNAAQIWNHSFYWDSMGPNCGGEPHGEIKEKIQEDFGSFNNFKDQFSNVLCGHFG 128
Query: 140 SGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAI 199
SGWGWL + +K + + T +P+ E TG+ P+ DVWEHAYY+ Y+N R +YVKA
Sbjct: 129 SGWGWLALNKNNKLVILQTHDAGNPIKENTGI-PILTCDVWEHAYYIDYRNDRLSYVKAW 187
Query: 200 YDIMNWNYINE 210
++++NWN+ NE
Sbjct: 188 WNLVNWNFANE 198
>pdb|1ISA|A Chain A, Structure-Function In E. Coli Iron Superoxide Dismutase:
Comparisons With The Manganese Enzyme From T.
Thermophilus
pdb|1ISA|B Chain B, Structure-Function In E. Coli Iron Superoxide Dismutase:
Comparisons With The Manganese Enzyme From T.
Thermophilus
pdb|1ISB|A Chain A, Structure-Function In E. Coli Iron Superoxide Dismutase:
Comparisons With The Manganese Enzyme From T.
Thermophilus
pdb|1ISB|B Chain B, Structure-Function In E. Coli Iron Superoxide Dismutase:
Comparisons With The Manganese Enzyme From T.
Thermophilus
pdb|1ISC|A Chain A, Structure-Function In E. Coli Iron Superoxide Dismutase:
Comparisons With The Manganese Enzyme From T.
Thermophilus
pdb|1ISC|B Chain B, Structure-Function In E. Coli Iron Superoxide Dismutase:
Comparisons With The Manganese Enzyme From T.
Thermophilus
Length = 192
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 103/189 (54%), Gaps = 6/189 (3%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG 81
ELP L Y L P I++E +E H+ KHHQTYVTN N ++ A I++
Sbjct: 2 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKG--TAFEGKSLEEIIRSS 59
Query: 82 PALKFNGGGHI-NHALFWKMLNKN-GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQG 139
FN + NH +W L N GG+P+ ++ AI ASFGS K + T A++ G
Sbjct: 60 EGGVFNNAAQVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFG 119
Query: 140 SGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAI 199
SGW WL + K ++T+ PL TT PL +DVWEHAYY+ Y+N RP Y++
Sbjct: 120 SGWTWLVKNSDGKLAIVSTSNAGTPL--TTDATPLLTVDVWEHAYYIDYRNARPGYLEHF 177
Query: 200 YDIMNWNYI 208
+ ++NW ++
Sbjct: 178 WALVNWEFV 186
>pdb|3LIO|A Chain A, X-Ray Structure Of The Iron Superoxide Dismutase From
Pseudoalteromonas Haloplanktis (Crystal Form I)
pdb|3LIO|B Chain B, X-Ray Structure Of The Iron Superoxide Dismutase From
Pseudoalteromonas Haloplanktis (Crystal Form I)
pdb|3LJ9|A Chain A, X-Ray Structure Of The Iron Superoxide Dismutase From
Pseudoalteromonas Haloplanktis In Complex With Sodium
Azide
pdb|3LJ9|B Chain B, X-Ray Structure Of The Iron Superoxide Dismutase From
Pseudoalteromonas Haloplanktis In Complex With Sodium
Azide
pdb|3LJF|A Chain A, The X-Ray Structure Of Iron Superoxide Dismutase From
Pseudoalteromonas Haloplanktis (Crystal Form Ii)
pdb|3LJF|C Chain C, The X-Ray Structure Of Iron Superoxide Dismutase From
Pseudoalteromonas Haloplanktis (Crystal Form Ii)
pdb|3LJF|B Chain B, The X-Ray Structure Of Iron Superoxide Dismutase From
Pseudoalteromonas Haloplanktis (Crystal Form Ii)
pdb|3LJF|D Chain D, The X-Ray Structure Of Iron Superoxide Dismutase From
Pseudoalteromonas Haloplanktis (Crystal Form Ii)
Length = 192
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 100/194 (51%), Gaps = 5/194 (2%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG 81
ELP L Y LEP I+ E +E HH KHH TYV N + K N IV
Sbjct: 2 FELPSLPYAIDALEPHISKETLEFHHGKHHNTYVVKLNGLIPGTK--FENKSLEEIVCSS 59
Query: 82 PALKFNGGGHI-NHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQG 139
FN I NH +W L+ NGG P+ +++AI A +GS D K+ L +V G
Sbjct: 60 DGGVFNNAAQIWNHTFYWNSLSPNGGGAPTGAVADAINAKWGSFDAFKEALNDKAVNNFG 119
Query: 140 SGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAI 199
S W WL SL I T+N G+ P+ +D+WEHAYY+ Y+NVRP+Y+K
Sbjct: 120 SSWTWL-VKLADGSLDIVNTSNAATPLTDDGVTPILTVDLWEHAYYIDYRNVRPDYLKGF 178
Query: 200 YDIMNWNYINELYA 213
+ ++NW + N +A
Sbjct: 179 WSLVNWEFANANFA 192
>pdb|2NYB|A Chain A, Crystal Structure Of E.Coli Iron Superoxide Dismutase Q69e
At 1.1 Angstrom Resolution
pdb|2NYB|B Chain B, Crystal Structure Of E.Coli Iron Superoxide Dismutase Q69e
At 1.1 Angstrom Resolution
pdb|2NYB|C Chain C, Crystal Structure Of E.Coli Iron Superoxide Dismutase Q69e
At 1.1 Angstrom Resolution
pdb|2NYB|D Chain D, Crystal Structure Of E.Coli Iron Superoxide Dismutase Q69e
At 1.1 Angstrom Resolution
pdb|2BKB|A Chain A, Q69e-Fesod
pdb|2BKB|B Chain B, Q69e-Fesod
pdb|2BKB|C Chain C, Q69e-Fesod
pdb|2BKB|D Chain D, Q69e-Fesod
Length = 192
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 103/189 (54%), Gaps = 6/189 (3%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG 81
ELP L Y L P I++E +E H+ KHHQTYVTN N ++ A I++
Sbjct: 2 FELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKG--TAFEGKSLEEIIRSS 59
Query: 82 PALKFNGGGHI-NHALFWKMLNKN-GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQG 139
FN + NH +W L N GG+P+ ++ AI ASFGS K + T A++ G
Sbjct: 60 EGGVFNNAAEVWNHTFYWNCLAPNAGGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFG 119
Query: 140 SGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAI 199
SGW WL + K ++T+ PL TT PL +DVWEHAYY+ Y+N RP Y++
Sbjct: 120 SGWTWLVKNSDGKLAIVSTSNAGTPL--TTDATPLLTVDVWEHAYYIDYRNARPGYLEHF 177
Query: 200 YDIMNWNYI 208
+ ++NW ++
Sbjct: 178 WALVNWEFV 186
>pdb|4E4E|A Chain A, Crystal Structure Of The Y34f Mutant Of Saccharomyces
Cerevisiae Manganese Superoxide Dismutase
pdb|4E4E|B Chain B, Crystal Structure Of The Y34f Mutant Of Saccharomyces
Cerevisiae Manganese Superoxide Dismutase
pdb|4E4E|C Chain C, Crystal Structure Of The Y34f Mutant Of Saccharomyces
Cerevisiae Manganese Superoxide Dismutase
pdb|4E4E|D Chain D, Crystal Structure Of The Y34f Mutant Of Saccharomyces
Cerevisiae Manganese Superoxide Dismutase
Length = 207
Score = 135 bits (339), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 112/196 (57%), Gaps = 14/196 (7%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEK-------LKAAVANNDA 74
+ LP L + + LEP I+ +I ELH++ HHQT+V +N A+++ L + +A
Sbjct: 2 VTLPDLXWDFGALEPYISGQINELHYTXHHQTFVNGFNTAVDQFQELSDLLAXEPSPANA 61
Query: 75 SAIVQLGPALKFNGGGHINHALFWKML---NKNGGKP-SDDLSNAIKASFGSLDKLKDEL 130
++ + + F+GGG NH LFW+ L ++ GG+P + L+ AI FGSLD+L
Sbjct: 62 RXMIAIQQNIXFHGGGFTNHCLFWENLAPESQGGGEPPTGALAXAIDEQFGSLDELIXLT 121
Query: 131 TAASVGIQGSGWGWLGYD-PKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYK 189
G+QGSGW ++ + L + T NQD + T L PL ID WEHAYYLQY+
Sbjct: 122 NTXLAGVQGSGWAFIVXNLSNGGXLDVVQTYNQDTV--TGPLVPLVAIDAWEHAYYLQYQ 179
Query: 190 NVRPNYVKAIYDIMNW 205
N +Y AI++++NW
Sbjct: 180 NXXADYFXAIWNVVNW 195
>pdb|4FFK|A Chain A, X-Ray Structure Of Iron Superoxide Dismutase From
Acidilobus Saccharovorans
Length = 223
Score = 134 bits (338), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 114/203 (56%), Gaps = 11/203 (5%)
Query: 23 ELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLK----AAVANNDASAIV 78
ELP L Y Y LEP+I++E + HH KHH YV NAAL+KL+ + + D A+
Sbjct: 20 ELPPLPYNYDALEPIISAETLRYHHDKHHLGYVNGANAALDKLEKYLNGQLTDIDVRAVS 79
Query: 79 QLGPALKFNGGGHINHALFWKML---NKNGGKPSDDLSNAIKASFGSLDKLKDELTAASV 135
+ +FN GGHI H L+W + K GG P + +AI FGS DK K A+
Sbjct: 80 R---DFEFNYGGHILHTLYWLNMAPKGKGGGTPGGAIGDAINKFFGSFDKFKKLFGDAAK 136
Query: 136 GIQGSGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNY 195
++G GW L YDP + L+I + + TT L PL +DV+EHAYY+ Y+N R Y
Sbjct: 137 NVEGVGWAILAYDPVTGDLRILQVEKHNNVV-TTNLIPLLAVDVFEHAYYIDYRNDRAKY 195
Query: 196 VKAIYDIMNWNYINELYAKAKSS 218
V + +D++NW+ + Y KA ++
Sbjct: 196 VDSWWDLINWDDVEARYQKALNT 218
>pdb|2AWP|A Chain A, Crystal Structure Of Plasmodium Knowlesi Structure Of Iron
Super-Oxide Dismutase
pdb|2AWP|B Chain B, Crystal Structure Of Plasmodium Knowlesi Structure Of Iron
Super-Oxide Dismutase
Length = 198
Score = 132 bits (333), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 107/196 (54%), Gaps = 5/196 (2%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG 81
I LPKL Y L P I+ E + H++KHH YV N ++ A I++
Sbjct: 3 IILPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNGLIKD--TPFATKSLVEIMKES 60
Query: 82 PALKFNGGGHI-NHALFWKMLNKN-GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQG 139
FN I NH+ +W + N GG+P ++ I+ FGS + K+E + G G
Sbjct: 61 TGAIFNNAAQIWNHSFYWDSMGPNCGGEPHGEIKEKIQEDFGSFNNFKNEFSNVLCGHFG 120
Query: 140 SGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAI 199
SGWGWL + +K + + T +P+ + TG+ P+ D+WEHAYY+ Y+N RP+YVKA
Sbjct: 121 SGWGWLVLNNNNKLVILQTHDAGNPIKDNTGI-PILTCDIWEHAYYIDYRNDRPSYVKAW 179
Query: 200 YDIMNWNYINELYAKA 215
++++NWN+ NE KA
Sbjct: 180 WNLVNWNFANENLKKA 195
>pdb|2GPC|A Chain A, The Crystal Structure Of The Enzyme Fe-Superoxide
Dismutase From Trypanosoma Cruzi
pdb|2GPC|B Chain B, The Crystal Structure Of The Enzyme Fe-Superoxide
Dismutase From Trypanosoma Cruzi
Length = 194
Score = 132 bits (332), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 103/187 (55%), Gaps = 4/187 (2%)
Query: 22 IELPKLDYGYKDLEPV-INSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQL 80
+P L +GY L ++ + + LH+ KHHQ YVT NAA + +A+A I++
Sbjct: 2 FSIPPLPWGYDGLAAKGLSKQQVTLHYDKHHQGYVTKLNAAAQT-NSALATKSIEEIIRT 60
Query: 81 GPALKFNGGGHI-NHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQ 138
FN I NH +W+ + NGG +P+ +++ I ASFGS K K+E T +VG
Sbjct: 61 EKGPIFNLAAQIFNHTFYWESMXPNGGGEPTGKVADEINASFGSFAKFKEEFTNVAVGHF 120
Query: 139 GSGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKA 198
GSGW WL D S LK+ T + LKPL DVWEHAYY+ YKN R YV+
Sbjct: 121 GSGWAWLVKDTNSGKLKVYQTHDAGCPLTEPNLKPLLTCDVWEHAYYVDYKNDRAAYVQT 180
Query: 199 IYDIMNW 205
++++NW
Sbjct: 181 FWNVVNW 187
>pdb|3TQJ|A Chain A, Structure Of The Superoxide Dismutase (Fe) (Sodb) From
Coxiella Burnetii
pdb|3TQJ|B Chain B, Structure Of The Superoxide Dismutase (Fe) (Sodb) From
Coxiella Burnetii
Length = 210
Score = 130 bits (328), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/189 (37%), Positives = 101/189 (53%), Gaps = 6/189 (3%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG 81
ELP L Y LEP I+ E +E HH KHH+ YV N +E I++
Sbjct: 3 FELPDLPYKLNALEPHISQETLEYHHGKHHRAYVNKLNKLIEG--TPFEKEPLEEIIRKS 60
Query: 82 PALKFNGGG-HINHALFWKMLNKNGG-KPSDDLSNAIKASFGSLDKLKDELTAASVGIQG 139
FN H NH +W ++ +GG PS +L++AI +FGSL+K K T ++ G
Sbjct: 61 DGGIFNNAAQHWNHTFYWHCMSPDGGGDPSGELASAIDKTFGSLEKFKALFTDSANNHFG 120
Query: 140 SGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAI 199
SGW WL D K ++T ++P+ T G KPL DVWEHAYY+ +N RP YV
Sbjct: 121 SGWAWLVKDNNGKLEVLSTVNARNPM--TEGKKPLMTCDVWEHAYYIDTRNDRPKYVNNF 178
Query: 200 YDIMNWNYI 208
+ ++NW+++
Sbjct: 179 WQVVNWDFV 187
>pdb|2GOJ|A Chain A, The Crystal Structure Of The Enzyme Fe-Superoxide
Dismutase From Plasmodium Falciparum
pdb|2GOJ|B Chain B, The Crystal Structure Of The Enzyme Fe-Superoxide
Dismutase From Plasmodium Falciparum
Length = 197
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 105/196 (53%), Gaps = 5/196 (2%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG 81
I LPKL Y L P I+ E + H++KHH YV N ++ A IV+
Sbjct: 2 ITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKD--TPFAEKSLLDIVKES 59
Query: 82 PALKFNGGGHI-NHALFWKMLNKN-GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQG 139
FN I NH +W + + GG+P ++ I+ FGS + K++ + G G
Sbjct: 60 SGAIFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFG 119
Query: 140 SGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAI 199
SGWGWL + +K + + T +P+ + TG+ P+ D+WEHAYY+ Y+N R +YVKA
Sbjct: 120 SGWGWLALNNNNKLVILQTHDAGNPIKDNTGI-PILTCDIWEHAYYIDYRNDRASYVKAW 178
Query: 200 YDIMNWNYINELYAKA 215
++++NWN+ NE KA
Sbjct: 179 WNLVNWNFANENLKKA 194
>pdb|2BPI|A Chain A, Stucture Of Iron Dependent Superoxide Dismutase From P.
Falciparum.
pdb|2BPI|B Chain B, Stucture Of Iron Dependent Superoxide Dismutase From P.
Falciparum
Length = 206
Score = 128 bits (321), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 105/196 (53%), Gaps = 5/196 (2%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG 81
I LPKL Y L P I+ E + H++KHH YV N ++ A IV+
Sbjct: 3 ITLPKLKYALNALSPHISEETLNFHYNKHHAGYVNKLNTLIKD--TPFAEKSLLDIVKES 60
Query: 82 PALKFNGGGHI-NHALFWKMLNKN-GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQG 139
FN I NH +W + + GG+P ++ I+ FGS + K++ + G G
Sbjct: 61 SGAIFNNAAQIWNHTFYWDSMGPDCGGEPHGEIKEKIQEDFGSFNNFKEQFSNILCGHFG 120
Query: 140 SGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAI 199
SGWGWL + +K + + T +P+ + TG+ P+ D+WEHAYY+ Y+N R +YVKA
Sbjct: 121 SGWGWLALNNNNKLVILQTHDAGNPIKDNTGI-PILTCDIWEHAYYIDYRNDRASYVKAW 179
Query: 200 YDIMNWNYINELYAKA 215
++++NWN+ NE KA
Sbjct: 180 WNLVNWNFANENLKKA 195
>pdb|1QNN|A Chain A, Cambialistic Superoxide Dismutase From Porphyromonas
Gingivalis
pdb|1QNN|B Chain B, Cambialistic Superoxide Dismutase From Porphyromonas
Gingivalis
pdb|1QNN|C Chain C, Cambialistic Superoxide Dismutase From Porphyromonas
Gingivalis
pdb|1QNN|D Chain D, Cambialistic Superoxide Dismutase From Porphyromonas
Gingivalis
pdb|1UER|A Chain A, Crystal Structure Of Porphyromonas Gingivalis Sod
pdb|1UER|B Chain B, Crystal Structure Of Porphyromonas Gingivalis Sod
pdb|1UER|C Chain C, Crystal Structure Of Porphyromonas Gingivalis Sod
pdb|1UER|D Chain D, Crystal Structure Of Porphyromonas Gingivalis Sod
Length = 191
Score = 128 bits (321), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 100/193 (51%), Gaps = 8/193 (4%)
Query: 23 ELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGP 82
EL L Y L PVI+ E +E HH KH +TYV N N + + N D + IVQ
Sbjct: 4 ELISLPYAVDALAPVISKETVEFHHGKHLKTYVDNLNKLI--IGTEFENADLNTIVQKSE 61
Query: 83 ALKFNGGGH-INHALFWKMLNKN-GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGS 140
FN G +NH L++ GG P L AI FGS +K K+E A + GS
Sbjct: 62 GGIFNNAGQTLNHNLYFTQFRPGKGGAPKGKLGEAIDKQFGSFEKFKEEFNTAGTTLFGS 121
Query: 141 GWGWLGYDPKSKSLKIATTANQ-DPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAI 199
GW WL D K L I N +P+ GL PL G DVWEHAYYL Y+N R +++K +
Sbjct: 122 GWVWLASDANGK-LSIEKEPNAGNPV--RKGLNPLLGFDVWEHAYYLTYQNRRADHLKDL 178
Query: 200 YDIMNWNYINELY 212
+ I++W+ + Y
Sbjct: 179 WSIVDWDIVESRY 191
>pdb|3JS4|A Chain A, Crystal Structure Of Iron Superoxide Dismutase From
Anaplasma Phagocytophilum
pdb|3JS4|B Chain B, Crystal Structure Of Iron Superoxide Dismutase From
Anaplasma Phagocytophilum
pdb|3JS4|C Chain C, Crystal Structure Of Iron Superoxide Dismutase From
Anaplasma Phagocytophilum
pdb|3JS4|D Chain D, Crystal Structure Of Iron Superoxide Dismutase From
Anaplasma Phagocytophilum
Length = 227
Score = 127 bits (319), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 115/206 (55%), Gaps = 21/206 (10%)
Query: 19 QGPIELPKL-DYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAAL----------EKLKA 67
QGP + +L D Y+ LEP I+S +++ H++ HH+TYV N + E L
Sbjct: 17 QGPGSMFELSDLPYEGLEPYISSHLLDRHYNGHHKTYVDVLNKLVVGTEFEGLGNESLGD 76
Query: 68 AV--ANNDASAIVQLGPALKFNGGGHI-NHALFWKMLNKNGG-KPSDDLSNAIKASFGSL 123
V A+N SA G A+ FN I NH +W+ + NGG P + L I+ SFGS+
Sbjct: 77 IVVKAHNSGSA----GRAI-FNNAAQIWNHDFYWQSMKPNGGGNPPEKLREMIEHSFGSV 131
Query: 124 DKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHA 183
+ + T + +G GSGW WL YD +K+LK+ +TAN D T G PL +DVWEHA
Sbjct: 132 EGFNNAFTTSGLGQFGSGWVWLVYDEDAKALKVVSTANADSPLLTQGQLPLATMDVWEHA 191
Query: 184 YYLQYKNVRPNYVKAIYD-IMNWNYI 208
YYL Y N+R Y+ + ++NW+++
Sbjct: 192 YYLDYLNLRKKYIDVFLEHLLNWDFV 217
>pdb|2W7W|A Chain A, The Crystal Structure Of Iron Superoxide Dismutase From
Aliivibrio Salmonicida.
pdb|2W7W|B Chain B, The Crystal Structure Of Iron Superoxide Dismutase From
Aliivibrio Salmonicida
Length = 194
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 106/195 (54%), Gaps = 5/195 (2%)
Query: 22 IELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG 81
ELP L + LEP I++E ++ HH KHH TYV N + + I++
Sbjct: 3 FELPALPFAKDALEPHISAETLDYHHGKHHNTYVVKLNGLIPGTE--FEGKTLEEIIKTS 60
Query: 82 PALKFNGGGHI-NHALFWKMLNKN-GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQG 139
FN I NH +W L N GG+P+ ++ AI A+FGS ++ K + T +++ G
Sbjct: 61 TGGVFNNAAQIWNHTFYWNCLAPNAGGQPTGAVAAAIDAAFGSFEEFKAKFTDSAINNFG 120
Query: 140 SGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAI 199
S W WL + SL I T+N G+ PL +D+WEHAYY+ ++NVRP+Y+ A
Sbjct: 121 SSWTWLVKNADG-SLAIVNTSNAATPLTDEGVTPLLTVDLWEHAYYIDFRNVRPDYMGAF 179
Query: 200 YDIMNWNYINELYAK 214
+ ++NW+++ E AK
Sbjct: 180 WSLVNWSFVEENLAK 194
>pdb|1UES|A Chain A, Crystal Structure Of Porphyromonas Gingivalis Sod
pdb|1UES|B Chain B, Crystal Structure Of Porphyromonas Gingivalis Sod
pdb|1UES|C Chain C, Crystal Structure Of Porphyromonas Gingivalis Sod
pdb|1UES|D Chain D, Crystal Structure Of Porphyromonas Gingivalis Sod
Length = 191
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 99/193 (51%), Gaps = 8/193 (4%)
Query: 23 ELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGP 82
EL L Y L PVI+ E +E HH KH +TYV N N + + N D + IVQ
Sbjct: 4 ELISLPYAVDALAPVISKETVEFHHGKHLKTYVDNLNKLI--IGTEFENADLNTIVQKSE 61
Query: 83 ALKFNGGGH-INHALFWKMLNKN-GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGS 140
FN G +NH L++ GG P L AI FGS +K K+E A + GS
Sbjct: 62 GGIFNNAGQTLNHNLYFTQFRPGKGGAPKGKLGEAIDKQFGSFEKFKEEFNTAGTTLFGS 121
Query: 141 GWGWLGYDPKSKSLKIATTANQ-DPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAI 199
GW WL D K L I N +P+ GL PL DVWEHAYYL Y+N R +++K +
Sbjct: 122 GWVWLASDANGK-LSIEKEPNAGNPV--RKGLNPLLTFDVWEHAYYLTYQNRRADHLKDL 178
Query: 200 YDIMNWNYINELY 212
+ I++W+ + Y
Sbjct: 179 WSIVDWDIVESRY 191
>pdb|3CEI|A Chain A, Crystal Structure Of Superoxide Dismutase From
Helicobacter Pylori
pdb|3CEI|B Chain B, Crystal Structure Of Superoxide Dismutase From
Helicobacter Pylori
Length = 213
Score = 121 bits (303), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 104/195 (53%), Gaps = 6/195 (3%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPA 83
L +L + + ++ + HH KHHQTYV N N ++ + AI+
Sbjct: 4 LRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKG--TDFEKSSLFAILTKSSG 61
Query: 84 LKFNGGGHI-NHALFWKMLNKNGGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGW 142
FN I NH +W L+ SD+L A++ FGSL+K K++ ++ + GSGW
Sbjct: 62 GVFNNAAQIYNHDFYWDCLSPKATALSDELKGALEKDFGSLEKFKEDFIKSATTLFGSGW 121
Query: 143 GWLGYDPKSKSLKIATTAN-QDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYD 201
W Y+ ++ ++I T+N Q P+ T PL +DVWEHAYY+ +KN RP Y++ Y
Sbjct: 122 NWAAYNLDTQKIEIIQTSNAQTPV--TDKKVPLLVVDVWEHAYYIDHKNARPVYLEKFYG 179
Query: 202 IMNWNYINELYAKAK 216
+NW+++++ Y AK
Sbjct: 180 HINWHFVSQCYEWAK 194
>pdb|2CW3|A Chain A, X-Ray Structure Of Pmsod2, Superoxide Dismutase From
Perkinsus Marinus
pdb|2CW3|B Chain B, X-Ray Structure Of Pmsod2, Superoxide Dismutase From
Perkinsus Marinus
Length = 280
Score = 113 bits (282), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 63/192 (32%), Positives = 103/192 (53%), Gaps = 12/192 (6%)
Query: 27 LDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPALK- 85
L YG + LEPVI++ ++ H++KHHQ Y+ L+ + + ++V LGP
Sbjct: 84 LPYGLEALEPVISAATVDFHYNKHHQGYIQKL---LDATGLPESRINLKSLVTLGPDRAG 140
Query: 86 ---FNGGGHI-NHALFWKML---NKNGGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQ 138
FN G I NH ++W + + +G L I+A +G++D++K+ + +
Sbjct: 141 ENVFNAAGQIYNHNMYWLSMVPTSGSGRHVPPRLLKLIRARWGNVDEMKENFMRKATALF 200
Query: 139 GSGWGWLGYDPKSKSLKIATTAN-QDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVK 197
GSGW WL +D + + L + T + PL E G PLF DVWEHAYYL Y++ R Y+
Sbjct: 201 GSGWIWLVWDTRERRLDLVGTKDAHSPLSEDAGKIPLFTCDVWEHAYYLDYQHDRAAYLT 260
Query: 198 AIYDIMNWNYIN 209
+ ++NW + +
Sbjct: 261 RWWSLINWEFAD 272
>pdb|1P7G|A Chain A, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|B Chain B, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|C Chain C, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|D Chain D, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|E Chain E, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|F Chain F, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|G Chain G, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|H Chain H, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|I Chain I, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|J Chain J, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|K Chain K, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|L Chain L, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|M Chain M, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|N Chain N, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|O Chain O, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|P Chain P, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|Q Chain Q, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|R Chain R, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|S Chain S, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|T Chain T, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|U Chain U, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|V Chain V, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|W Chain W, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
pdb|1P7G|X Chain X, Crystal Structure Of Superoxide Dismutase From Pyrobaculum
Aerophilum
Length = 222
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 112/198 (56%), Gaps = 10/198 (5%)
Query: 24 LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKL---KAAVANNDASAIVQL 80
LP L Y Y LEP I++EI +LHH KHHQ YV NAALEKL + A D A+++
Sbjct: 20 LPPLPYAYNALEPYISAEIXQLHHQKHHQGYVNGANAALEKLEKFRKGEAQIDIRAVLR- 78
Query: 81 GPALKFNGGGHINHALFW---KMLNKNGGKPSDDLSNAIKASFGSLDKLKDELTAASVGI 137
L F+ GHI H++FW K GGKP +++ I FGS +K K+E + A+ +
Sbjct: 79 --DLSFHLNGHILHSIFWPNXAPPGKGGGKPGGKIADLINKFFGSFEKFKEEFSQAAKNV 136
Query: 138 QGSGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVK 197
+G GW L Y+P + L I + L + L +DVWEHAYYLQYKN R +YV
Sbjct: 137 EGVGWAILVYEPLEEQLLILQIEKHN-LXHAADAQVLLALDVWEHAYYLQYKNDRGSYVD 195
Query: 198 AIYDIMNWNYINELYAKA 215
++++NW+ + KA
Sbjct: 196 NWWNVVNWDDVERRLQKA 213
>pdb|1WB8|A Chain A, Iron Superoxide Dismutase (Fe-Sod) From The
Hyperthermophile Sulfolobus Solfataricus. 2.3 A
Resolution Structure Of Recombinant Protein With A
Covalently Modified Tyrosin In The Active Site.
pdb|1WB8|B Chain B, Iron Superoxide Dismutase (Fe-Sod) From The
Hyperthermophile Sulfolobus Solfataricus. 2.3 A
Resolution Structure Of Recombinant Protein With A
Covalently Modified Tyrosin In The Active Site
Length = 210
Score = 110 bits (276), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/195 (35%), Positives = 109/195 (55%), Gaps = 17/195 (8%)
Query: 23 ELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANN------DASA 76
ELP L Y LEP I+ +I+++H++ HH+ YV N+ LE+L+ V + D
Sbjct: 10 ELPPLPYKIDALEPYISKDIIDVHYNGHHKGYVNGANSLLERLEKVVKGDLQTGQYDIQG 69
Query: 77 IVQLGPALKFNGGGHINHALFWKMLNKNGGKPSDD---LSNAIKASFGSLDKLKDELTAA 133
I++ L FN GH HAL+W+ + +G L++ I +GS D+ K T
Sbjct: 70 IIR---GLTFNINGHKLHALYWENMAPSGKGGGKPGGALADLINKQYGSFDRFKQVFTET 126
Query: 134 SVGIQGSGWGWLGYDPKSKSLKIATTAN--QDPLFETTGLKPLFGIDVWEHAYYLQYKNV 191
+ + G+GW L YD +S +L+I T N Q+ + E + + +D +EHAYYLQYKN
Sbjct: 127 ANSLPGTGWAVLYYDTESGNLQIMTFENHFQNHIAE---IPIILILDEFEHAYYLQYKNK 183
Query: 192 RPNYVKAIYDIMNWN 206
R +YV A ++++NW+
Sbjct: 184 RADYVNAWWNVVNWD 198
>pdb|1COJ|A Chain A, Fe-Sod From Aquifex Pyrophilus, A Hyperthermophilic
Bacterium
Length = 212
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/191 (36%), Positives = 101/191 (52%), Gaps = 11/191 (5%)
Query: 32 KDLEPVINSEIMELHHSKHHQTYVTNYNAALEKL------KAAVANNDASAIVQLGPALK 85
++LE + N +I E H H++ YV YN EKL + AN + S +L
Sbjct: 14 QNLEGISNEQI-EPHFEAHYKGYVAKYNEIQEKLADQNFADRSKANQNYSEYRELKVEET 72
Query: 86 FNGGGHINHALFWKMLNKNG-GKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGW 144
FN G + H L++ ML G G+PS+ L I+ G LD +EL AA++ +G W
Sbjct: 73 FNYMGVVLHELYFGMLTPGGKGEPSEALKKKIEEDIGGLDACTNELKAAAMAFRG--WAI 130
Query: 145 LGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMN 204
LG D S L + + ++ TGL PL ID +EHAYY+ YKN RP Y+ A + +N
Sbjct: 131 LGLDIFSGRL-VVNGLDAHNVYNLTGLIPLIVIDTYEHAYYVDYKNKRPPYIDAFFKNIN 189
Query: 205 WNYINELYAKA 215
W+ +NE + KA
Sbjct: 190 WDVVNERFEKA 200
>pdb|1WB7|A Chain A, Iron Superoxide Dismutase (Fe-Sod) From The
Hyperthermophile Sulfolobus Solfataricus. Crystal
Structure Of The Y41f Mutant.
pdb|1WB7|B Chain B, Iron Superoxide Dismutase (Fe-Sod) From The
Hyperthermophile Sulfolobus Solfataricus. Crystal
Structure Of The Y41f Mutant
Length = 210
Score = 109 bits (273), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/195 (34%), Positives = 109/195 (55%), Gaps = 17/195 (8%)
Query: 23 ELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANN------DASA 76
ELP L Y LEP I+ +I+++H++ HH+ +V N+ LE+L+ V + D
Sbjct: 10 ELPPLPYKIDALEPYISKDIIDVHYNGHHKGFVNGANSLLERLEKVVKGDLQTGQYDIQG 69
Query: 77 IVQLGPALKFNGGGHINHALFWKMLNKNGGKPSDD---LSNAIKASFGSLDKLKDELTAA 133
I++ L FN GH HAL+W+ + +G L++ I +GS D+ K T
Sbjct: 70 IIR---GLTFNINGHKLHALYWENMAPSGKGGGKPGGALADLINKQYGSFDRFKQVFTET 126
Query: 134 SVGIQGSGWGWLGYDPKSKSLKIATTAN--QDPLFETTGLKPLFGIDVWEHAYYLQYKNV 191
+ + G+GW L YD +S +L+I T N Q+ + E + + +D +EHAYYLQYKN
Sbjct: 127 ANSLPGTGWAVLYYDTESGNLQIMTFENHFQNHIAE---IPIILILDEFEHAYYLQYKNK 183
Query: 192 RPNYVKAIYDIMNWN 206
R +YV A ++++NW+
Sbjct: 184 RADYVNAWWNVVNWD 198
>pdb|1MY6|A Chain A, The 1.6 A Structure Of Fe-superoxide Dismutase From The
Thermophilic Cyanobacterium Thermosynechococcus
Elongatus : Correlation Of Epr And Structural
Characteristics
pdb|1MY6|B Chain B, The 1.6 A Structure Of Fe-superoxide Dismutase From The
Thermophilic Cyanobacterium Thermosynechococcus
Elongatus : Correlation Of Epr And Structural
Characteristics
Length = 199
Score = 109 bits (272), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/190 (35%), Positives = 105/190 (55%), Gaps = 12/190 (6%)
Query: 34 LEPV-INSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGPALK---FNGG 89
LEP ++++ +E H+ KHH+ YV N N + + A + + G A K FN
Sbjct: 14 LEPYGMSAKTLEFHYGKHHKGYVDNLNKLTQDTELADKSLEDVIRTTYGDAAKVGIFNNA 73
Query: 90 GHI-NHALFWKMLNKNGGK-PSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGY 147
+ NH FW L GG P+ D++ I ++FGS D+ K + A+ GSGW WL
Sbjct: 74 AQVWNHTFFWNSLKPGGGGVPTGDVAARINSAFGSYDEFKAQFKNAAATQFGSGWAWLVL 133
Query: 148 DPKSKSLKIATTAN-QDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYD-IMNW 205
+ + +LK+ TAN ++PL G PL IDVWEHAYYL Y+N RP+++ + ++NW
Sbjct: 134 E--AGTLKVTKTANAENPLVH--GQVPLLTIDVWEHAYYLDYQNRRPDFIDNFLNQLVNW 189
Query: 206 NYINELYAKA 215
+++ + A A
Sbjct: 190 DFVAKNLAAA 199
>pdb|1B06|A Chain A, Superoxide Dismutase From Sulfolobus Acidocaldarius
pdb|1B06|B Chain B, Superoxide Dismutase From Sulfolobus Acidocaldarius
pdb|1B06|C Chain C, Superoxide Dismutase From Sulfolobus Acidocaldarius
pdb|1B06|D Chain D, Superoxide Dismutase From Sulfolobus Acidocaldarius
pdb|1B06|E Chain E, Superoxide Dismutase From Sulfolobus Acidocaldarius
pdb|1B06|F Chain F, Superoxide Dismutase From Sulfolobus Acidocaldarius
Length = 210
Score = 105 bits (262), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 105/193 (54%), Gaps = 13/193 (6%)
Query: 23 ELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANN------DASA 76
E P+L Y LEP I+ +I+++H++ HH+ YV N+ L++L+ + + D
Sbjct: 10 EFPQLPYKVDALEPYISKDIIDVHYNGHHKGYVNGANSLLDRLEKLIKGDLPQGQYDLQG 69
Query: 77 IVQLGPALKFNGGGHINHALFWKMLNKNGGKPSDD---LSNAIKASFGSLDKLKDELTAA 133
I++ L FN GH HA++W + G L++ I +GS D+ K + +
Sbjct: 70 ILR---GLTFNINGHKLHAIYWNNMAPAGKGGGKPGGALADLIDKQYGSFDRFKQVFSES 126
Query: 134 SVGIQGSGWGWLGYDPKSKSLKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRP 193
+ + GSGW L YD +S +L+I T N + L + +D +EHAYYLQYKN R
Sbjct: 127 ANSLPGSGWTVLYYDNESGNLQIMTVENH-FMNHIAELPVILIVDEFEHAYYLQYKNKRG 185
Query: 194 NYVKAIYDIMNWN 206
+Y+ A ++++NW+
Sbjct: 186 DYLNAWWNVVNWD 198
>pdb|1UNF|X Chain X, The Crystal Structure Of The Eukaryotic Fesod From Vigna
Unguiculata Suggests A New Enzymatic Mechanism
Length = 238
Score = 101 bits (251), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/231 (33%), Positives = 109/231 (47%), Gaps = 37/231 (16%)
Query: 16 PILQGPIELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNA----------ALEKL 65
P + EL Y LEPV++ + +E H KHH+TYV N +LE++
Sbjct: 13 PKVNAKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHRTYVENLKKQVVGTELDGKSLEEI 72
Query: 66 KAAVANNDASAIVQLGPALKFNGGGHI-NHALFWK-MLNKNGGKPSDDLSNAIKASFGSL 123
N + PA FN + NH FW+ M GGKPS +L I+ FGS
Sbjct: 73 IVTAYNKG-----DILPA--FNNAAQVWNHDFFWECMKPGGGGKPSGELLELIERDFGSF 125
Query: 124 DKLKDELTAASVGIQGSGWGWLGY----------------DPKSKSLKIATTANQDPLFE 167
+K DE AA+ GSGW WL Y D +K + I + +PL
Sbjct: 126 EKFLDEFKAAAATQFGSGWAWLAYKASKLDGENAANPPSADEDNKLVVIKSPNAVNPLV- 184
Query: 168 TTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYD-IMNWNYINELYAKAKS 217
G PL IDVWEHAYYL ++N RP+Y+ D +++W+ ++ +AK+
Sbjct: 185 WGGYYPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWDAVSSRLEQAKA 235
>pdb|2WTB|A Chain A, Arabidopsis Thaliana Multifuctional Protein, Mfp2
Length = 725
Score = 29.6 bits (65), Expect = 1.4, Method: Composition-based stats.
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 17/78 (21%)
Query: 56 TNYNAALEKLKAAVANNDASAIVQLGPALKFNGGGHINHALFWKMLNKNGGKPSDDLSNA 115
+NY AL + ND AIV G +F+GG I+ F +M N +P
Sbjct: 41 SNYEEALSR-------NDVKAIVITGAKGRFSGGFDISG--FGEMQKGNVKEP------- 84
Query: 116 IKASFGSLDKLKDELTAA 133
KA + S+D + D L AA
Sbjct: 85 -KAGYISIDIITDLLEAA 101
>pdb|4E31|A Chain A, X-Ray Structure Of The Y76f Mutant Of Tcab9, A
C-3'-Methyltransferase, In Complex With
S-Adenosyl-L-Homocysteine And Sugar Product
Length = 416
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 116 IKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP-----LFETT- 169
++A G++ K++DELTA ++ G +GY +KS + P +++TT
Sbjct: 294 LRAFAGNVVKIRDELTALLHRLRAEGRSVVGYGATAKSATVTNFCGIGPDLVHSVYDTTP 353
Query: 170 ----GLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKAK 216
L P I V + + + P+Y + WN+ E+ AK +
Sbjct: 354 DKQNRLTPGAHIPVRPAS---AFSDPYPDYAL----LFAWNHAEEIMAKEQ 397
>pdb|4E2X|A Chain A, X-Ray Structure Of The Y222f Mutant Of Tcab9, A C-3'-
Methyltransferase, In Complex With
S-Adenosyl-L-Homocysteine And Dtdp
Length = 416
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 116 IKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP-----LFETT- 169
++A G++ K++DELTA ++ G +GY +KS + P +++TT
Sbjct: 294 LRAFAGNVVKIRDELTALLHRLRAEGRSVVGYGATAKSATVTNFCGIGPDLVHSVYDTTP 353
Query: 170 ----GLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKAK 216
L P I V + + + P+Y + WN+ E+ AK +
Sbjct: 354 DKQNRLTPGAHIPVRPAS---AFSDPYPDYAL----LFAWNHAEEIMAKEQ 397
>pdb|3NDI|A Chain A, X-Ray Structure Of A C-3'-Methyltransferase In Complex
With S- Adenosylmethionine And Dtmp
pdb|3NDJ|A Chain A, X-Ray Structure Of A C-3'-Methyltransferase In Complex
With S- Adenosyl-L-Homocysteine And Sugar Product
pdb|4E32|A Chain A, X-Ray Structure Of The C-3'-Methyltransferase Tcab9 In
Complex With S- Adenosyl-L-Homocysteine And Dtdp-Sugar
Substrate
pdb|4E33|A Chain A, X-Ray Structure Of The C-3'-Methyltransferase Tcab9 In
Complex With S- Adenosyl-L-Homocysteine And Reduced
Dtdp-Sugar Substrate
Length = 416
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 116 IKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP-----LFETT- 169
++A G++ K++DELTA ++ G +GY +KS + P +++TT
Sbjct: 294 LRAFAGNVVKIRDELTALLHRLRAEGRSVVGYGATAKSATVTNFCGIGPDLVHSVYDTTP 353
Query: 170 ----GLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKAK 216
L P I V + + + P+Y + WN+ E+ AK +
Sbjct: 354 DKQNRLTPGAHIPVRPAS---AFSDPYPDYAL----LFAWNHAEEIMAKEQ 397
>pdb|4E2Y|A Chain A, X-Ray Structure Of The E224q Mutant Of Tcab9, A C-3'-
Methyltransferase, In Complex With
S-Adenosyl-L-Homocysteine And Sugar Product
Length = 416
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 116 IKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP-----LFETT- 169
++A G++ K++DELTA ++ G +GY +KS + P +++TT
Sbjct: 294 LRAFAGNVVKIRDELTALLHRLRAEGRSVVGYGATAKSATVTNFCGIGPDLVHSVYDTTP 353
Query: 170 ----GLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKAK 216
L P I V + + + P+Y + WN+ E+ AK +
Sbjct: 354 DKQNRLTPGAHIPVRPAS---AFSDPYPDYAL----LFAWNHAEEIMAKEQ 397
>pdb|4J40|A Chain A, Crystal Structure Of The Dual-domain Ggdef-eal Module Of
Fimx From Pseudomonas Aeruginosa
pdb|4J40|B Chain B, Crystal Structure Of The Dual-domain Ggdef-eal Module Of
Fimx From Pseudomonas Aeruginosa
Length = 437
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Query: 53 TYVTNYNAALEKLKAAVANNDASAIVQ-----------LGPALKFNGGGHINHALFWKML 101
+ + YN A E+L AA D AI+Q P + G H N+ + ++L
Sbjct: 169 SQIKQYNPA-EELAAAAQRGDVIAILQQALETNSFRLLFQPVISLRGDSHENYEVLLRLL 227
Query: 102 NKNGGK--PSDDLSNAIKASFG 121
N G + P++ L A +A
Sbjct: 228 NPQGQEVPPAEFLHAAKEAGLA 249
>pdb|4E2Z|A Chain A, X-Ray Structure Of The H225n Mutant Of Tcab9, A C-3'-
Methyltransferase, In Complex With
S-Adenosyl-L-Homocysteine And Sugar Product
Length = 416
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 116 IKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP-----LFETT- 169
++A G++ K++DELTA ++ G +GY +KS + P +++TT
Sbjct: 294 LRAFAGNVVKIRDELTALLHRLRAEGRSVVGYGATAKSATVTNFCGIGPDLVHSVYDTTP 353
Query: 170 ----GLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKAK 216
L P I V + + + P+Y + WN+ E+ AK +
Sbjct: 354 DKQNRLTPGAHIPVRPAS---AFSDPYPDYAL----LFAWNHAEEIMAKEQ 397
>pdb|4E2W|A Chain A, X-Ray Structure Of The H181n Mutant Of Tcab9, A C-3'-
Methyltransferase, In Complex With
S-Adenosyl-L-Homocysteine And Sugar Product
Length = 416
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 116 IKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP-----LFETT- 169
++A G++ K++DELTA ++ G +GY +KS + P +++TT
Sbjct: 294 LRAFAGNVVKIRDELTALLHRLRAEGRSVVGYGATAKSATVTNFCGIGPDLVHSVYDTTP 353
Query: 170 ----GLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKAK 216
L P I V + + + P+Y + WN+ E+ AK +
Sbjct: 354 DKQNRLTPGAHIPVRPAS---AFSDPYPDYAL----LFAWNHAEEIMAKEQ 397
>pdb|4E30|A Chain A, X-Ray Structure Of The H181nE224Q DOUBLE MUTANT OF TCAB9,
A C-3'- Methyltransferase, In Complex With
S-Adenosyl-L-Homocysteine And Dtdp
Length = 416
Score = 28.9 bits (63), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 17/111 (15%)
Query: 116 IKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP-----LFETT- 169
++A G++ K++DELTA ++ G +GY +KS + P +++TT
Sbjct: 294 LRAFAGNVVKIRDELTALLHRLRAEGRSVVGYGATAKSATVTNFCGIGPDLVHSVYDTTP 353
Query: 170 ----GLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKAK 216
L P I V + + + P+Y + WN+ E+ AK +
Sbjct: 354 DKQNRLTPGAHIPVRPAS---AFSDPYPDYAL----LFAWNHAEEIMAKEQ 397
>pdb|2M3D|A Chain A, Nmr Structure Of The Guct Domain From Human Dead Box
Polypeptide 21
Length = 95
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 17 ILQGPIELPKLDYGYKDLEPVINSEI 42
ILQ IE+P + Y +K+L+ + EI
Sbjct: 25 ILQCSIEMPNISYAWKELKEQLGEEI 50
>pdb|2R6R|1 Chain 1, Aquifex Aeolicus Ftsz
pdb|2R75|1 Chain 1, Aquifex Aeolicus Ftsz With 8-Morpholino-Gtp
Length = 338
Score = 27.7 bits (60), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 5/62 (8%)
Query: 7 LATRKIVTSPILQG-PIE----LPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAA 61
+A K VTSP+L+G IE L + +D+ I E+ME HSK H + A
Sbjct: 235 IAVEKAVTSPLLEGNTIEGARRLLVTIWTSEDIPYDIVDEVMERIHSKVHPEAEIIFGAV 294
Query: 62 LE 63
LE
Sbjct: 295 LE 296
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.315 0.133 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,089,652
Number of Sequences: 62578
Number of extensions: 310370
Number of successful extensions: 921
Number of sequences better than 100.0: 111
Number of HSP's better than 100.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 628
Number of HSP's gapped (non-prelim): 111
length of query: 218
length of database: 14,973,337
effective HSP length: 95
effective length of query: 123
effective length of database: 9,028,427
effective search space: 1110496521
effective search space used: 1110496521
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 49 (23.5 bits)