RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16344
(218 letters)
>d2p4ka2 d.44.1.1 (A:84-198) Mn superoxide dismutase (MnSOD) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 128 bits (323), Expect = 5e-39
Identities = 70/112 (62%), Positives = 86/112 (76%)
Query: 105 GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP 164
GG+P +L AIK FGS DK K++LTAASVG+QGSGWGWLG++ + L+IA NQDP
Sbjct: 3 GGEPKGELLEAIKRDFGSFDKFKEKLTAASVGVQGSGWGWLGFNKERGHLQIAACPNQDP 62
Query: 165 LFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKAK 216
L TTGL PL GIDVWEHAYYLQYKNVRP+Y+KAI++++NW + E Y K
Sbjct: 63 LQGTTGLIPLLGIDVWEHAYYLQYKNVRPDYLKAIWNVINWENVTERYMACK 114
>d1ma1a2 d.44.1.1 (A:92-204) Fe superoxide dismutase (FeSOD)
{Archaeon Methanobacterium thermoautotrophicum [TaxId:
145262]}
Length = 113
Score = 126 bits (318), Expect = 3e-38
Identities = 39/111 (35%), Positives = 64/111 (57%), Gaps = 1/111 (0%)
Query: 105 GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP 164
GG+PS L+ I+ FGS ++ + E + A++ +GSGW L Y ++ L I +
Sbjct: 3 GGEPSGKLAEYIEKDFGSFERFRKEFSQAAISAEGSGWAVLTYCQRTDRLFIMQVEKHNV 62
Query: 165 LFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKA 215
+ L +DVWEHAYY+ Y+NVRP+YV+A ++I+NW + + +
Sbjct: 63 -NVIPHFRILLVLDVWEHAYYIDYRNVRPDYVEAFWNIVNWKEVEKRFEDI 112
>d1unfx2 d.44.1.1 (X:105-238) Fe superoxide dismutase (FeSOD)
{Cowpea (Vigna unguiculata) [TaxId: 3917]}
Length = 134
Score = 124 bits (313), Expect = 2e-37
Identities = 45/129 (34%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 105 GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKS----------- 153
GGKPS +L I+ FGS +K DE AA+ GSGW WL Y
Sbjct: 3 GGKPSGELLELIERDFGSFEKFLDEFKAAAATQFGSGWAWLAYKASKLDGENAANPPSAD 62
Query: 154 ----LKIATTANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYD-IMNWNYI 208
L + + N G PL IDVWEHAYYL ++N RP+Y+ D +++W+ +
Sbjct: 63 EDNKLVVIKSPNAVNPLVWGGYYPLLTIDVWEHAYYLDFQNRRPDYISVFMDKLVSWDAV 122
Query: 209 NELYAKAKS 217
+ +AK+
Sbjct: 123 SSRLEQAKA 131
>d1bsma2 d.44.1.1 (A:87-201) Cambialistic superoxide dismutase
{Propionibacterium shermanii [TaxId: 1752]}
Length = 115
Score = 123 bits (310), Expect = 5e-37
Identities = 45/113 (39%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
Query: 106 GKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDPL 165
+P+D+L AI FGS D +K + TAA+ GIQGSGW L +DP K + +
Sbjct: 4 ERPTDELGAAIDEFFGSFDNMKAQFTAAATGIQGSGWASLVWDPLGKRINTLQFYDHQNN 63
Query: 166 FETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKAKSS 218
G PL +D+WEHA+YLQYKNV+ +YVK+ ++++NW+ + +++A+ +
Sbjct: 64 L-PAGSIPLLQLDMWEHAFYLQYKNVKGDYVKSWWNVVNWDDVALRFSEARVA 115
>d1p7ga2 d.44.1.1 (A:104-222) Fe superoxide dismutase (FeSOD)
{Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Length = 119
Score = 121 bits (305), Expect = 3e-36
Identities = 41/114 (35%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 105 GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP 164
GGKP +++ I FGS +K K+E + A+ ++G GW L Y+P + L I +
Sbjct: 1 GGKPGGKIADLINKFFGSFEKFKEEFSQAAKNVEGVGWAILVYEPLEEQLLILQIEKHNL 60
Query: 165 LFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKAKSS 218
+ L +DVWEHAYYLQYKN R +YV ++++NW+ + KA +
Sbjct: 61 -MHAADAQVLLALDVWEHAYYLQYKNDRGSYVDNWWNVVNWDDVERRLQKALNG 113
>d1wb8a2 d.44.1.1 (A:93-208) Fe superoxide dismutase (FeSOD)
{Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Length = 116
Score = 121 bits (304), Expect = 4e-36
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Query: 102 NKNGGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTAN 161
K GGKP L++ I +GS D+ K T + + G+GW L YD +S +L+I T N
Sbjct: 3 GKGGGKPGGALADLINKQYGSFDRFKQVFTETANSLPGTGWAVLYYDTESGNLQIMTFEN 62
Query: 162 QDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKA 215
+ + +D +EHAYYLQYKN R +YV A ++++NW+ + K
Sbjct: 63 HFQN-HIAEIPIILILDEFEHAYYLQYKNKRADYVNAWWNVVNWDAAEKKLQKY 115
>d1mnga2 d.44.1.1 (A:93-203) Mn superoxide dismutase (MnSOD)
{Thermus thermophilus [TaxId: 274]}
Length = 111
Score = 119 bits (300), Expect = 1e-35
Identities = 50/111 (45%), Positives = 70/111 (63%), Gaps = 2/111 (1%)
Query: 105 GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP 164
+P +L AI FG LK++LT A++G GSGW WL DP K L + +T NQD
Sbjct: 3 AKEPVGELKKAIDEQFGGFQALKEKLTQAAMGRFGSGWAWLVKDPFGK-LHVLSTPNQDN 61
Query: 165 LFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKA 215
G P+ GIDVWEHAYYL+Y+N R +Y++AI++++NW+ E + KA
Sbjct: 62 -PVMEGFTPIVGIDVWEHAYYLKYQNRRADYLQAIWNVLNWDVAEEFFKKA 111
>d1idsa2 d.44.1.1 (A:86-199) Fe superoxide dismutase (FeSOD)
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 114
Score = 118 bits (297), Expect = 4e-35
Identities = 47/113 (41%), Positives = 69/113 (61%), Gaps = 1/113 (0%)
Query: 105 GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP 164
G KP+ +L+ AI +FGS DK + + AA+ +QGSGW LG+D L I +
Sbjct: 3 GDKPTGELAAAIADAFGSFDKFRAQFHAAATTVQGSGWAALGWDTLGNKLLIFQVYDHQT 62
Query: 165 LFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKAKS 217
F G+ PL +D+WEHA+YLQYKNV+ ++ KA ++++NW + YA A S
Sbjct: 63 NF-PLGIVPLLLLDMWEHAFYLQYKNVKVDFAKAFWNVVNWADVQSRYAAATS 114
>d1coja2 d.44.1.1 (A:91-212) Fe superoxide dismutase (FeSOD)
{Aquifex pyrophilus [TaxId: 2714]}
Length = 122
Score = 118 bits (296), Expect = 8e-35
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 3/114 (2%)
Query: 105 GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP 164
G+PS+ L I+ G LD +EL AA++ GW LG D S L + +
Sbjct: 3 KGEPSEALKKKIEEDIGGLDACTNELKAAAMA--FRGWAILGLDIFSGRLVVNGLDAHNV 60
Query: 165 LFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKAKSS 218
T PL ID +EHAYY+ YKN RP Y+ A + +NW+ +NE + KA +
Sbjct: 61 YNLTGL-IPLIVIDTYEHAYYVDYKNKRPPYIDAFFKNINWDVVNERFEKAMKA 113
>d1dt0a2 d.44.1.1 (A:84-197) Fe superoxide dismutase (FeSOD)
{Pseudomonas ovalis [TaxId: 303]}
Length = 114
Score = 115 bits (290), Expect = 4e-34
Identities = 50/113 (44%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
Query: 105 GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP 164
GG+P+ L++AI A+FGS DK K+E T SVG GSGWGWL +T P
Sbjct: 2 GGQPTGALADAINAAFGSFDKFKEEFTKTSVGTFGSGWGWLVKKADGSLALASTIGAGCP 61
Query: 165 LFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKAKS 217
L T G PL DVWEHAYY+ Y+N+RP YV+A ++++NW ++ E +
Sbjct: 62 L--TIGDTPLLTCDVWEHAYYIDYRNLRPKYVEAFWNLVNWAFVAEQFEGKTY 112
>d1ix9a2 d.44.1.1 (A:91-205) Mn superoxide dismutase (MnSOD)
{Escherichia coli [TaxId: 562]}
Length = 115
Score = 115 bits (290), Expect = 5e-34
Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 7/117 (5%)
Query: 105 GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP 164
G DL AI+ FGS+D K E A+ GSGW W K L + +TANQD
Sbjct: 1 GTTLQGDLKAAIERDFGSVDNFKAEFEKAAASRFGSGWAW--LVLKGDKLAVVSTANQDS 58
Query: 165 LF-----ETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKAK 216
P+ G+DVWEHAY+L+++N RP+Y+K ++++NW+ +A K
Sbjct: 59 PLMGEAISGASGFPIMGLDVWEHAYFLKFQNRRPDYIKEFWNVVNWDEAAARFAAKK 115
>d1kkca2 d.44.1.1 (A:98-213) Mn superoxide dismutase (MnSOD)
{Aspergillus fumigatus [TaxId: 5085]}
Length = 116
Score = 115 bits (289), Expect = 6e-34
Identities = 52/117 (44%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 103 KNGG---KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATT 159
K+GG + L AI+ +GS DK KD +GIQGSGWGWL D L I TT
Sbjct: 2 KSGGGKIDQAPVLKAAIEQRWGSFDKFKDAFNTTLLGIQGSGWGWLVTDGPKGKLDITTT 61
Query: 160 ANQDPLFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKAK 216
+QDP TG P+FG+D+WEHAYYLQY N + +Y K I++++NW Y
Sbjct: 62 HDQDP---VTGAAPVFGVDMWEHAYYLQYLNDKASYAKGIWNVINWAEAENRYIAGD 115
>d1y67a2 d.44.1.1 (A:98-213) Mn superoxide dismutase (MnSOD)
{Deinococcus radiodurans [TaxId: 1299]}
Length = 116
Score = 114 bits (287), Expect = 1e-33
Identities = 46/115 (40%), Positives = 69/115 (60%), Gaps = 7/115 (6%)
Query: 107 KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDPLF 166
+PS +L +AI ++FGS D K + A+ GSGW W K L + +TANQD
Sbjct: 2 QPSGELLDAINSAFGSFDAFKQKFEDAAKTRFGSGWAW--LVVKDGKLDVVSTANQDNPL 59
Query: 167 ETTGL-----KPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKAK 216
+ P+ G+DVWEHAYYL Y+N RP+Y+ A ++++NW+ +++ YA AK
Sbjct: 60 MGEAIAGVSGTPILGVDVWEHAYYLNYQNRRPDYLAAFWNVVNWDEVSKRYAAAK 114
>d1uera2 d.44.1.1 (A:85-191) Cambialistic superoxide dismutase
{Porphyromonas gingivalis [TaxId: 837]}
Length = 107
Score = 113 bits (283), Expect = 4e-33
Identities = 43/108 (39%), Positives = 58/108 (53%), Gaps = 2/108 (1%)
Query: 105 GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP 164
GG P L AI FGS +K K+E A + GSGW WL D K +P
Sbjct: 2 GGAPKGKLGEAIDKQFGSFEKFKEEFNTAGTTLFGSGWVWLASDANGKLSIEKEPNAGNP 61
Query: 165 LFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELY 212
+ GL PL G DVWEHAYYL Y+N R +++K ++ I++W+ + Y
Sbjct: 62 V--RKGLNPLLGFDVWEHAYYLTYQNRRADHLKDLWSIVDWDIVESRY 107
>d1jr9a2 d.44.1.1 (A:92-202) Mn superoxide dismutase (MnSOD)
{Bacillus halodenitrificans [TaxId: 1482]}
Length = 111
Score = 112 bits (280), Expect = 1e-32
Identities = 41/111 (36%), Positives = 68/111 (61%), Gaps = 3/111 (2%)
Query: 105 GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP 164
GGKP+ ++++ I +GS +K ++E AA+ G GSGW WL + + +
Sbjct: 3 GGKPTGEVADKINDKYGSFEKFQEEFAAAAAGRFGSGWAWLVVNNGEIEIMSTPIQDNPL 62
Query: 165 LFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKA 215
G KP+ G+DVWEHAYYL+Y+N RP+Y+ A ++++NW+ + Y++A
Sbjct: 63 ---MEGKKPILGLDVWEHAYYLKYQNKRPDYISAFWNVVNWDEVAAQYSQA 110
>d1gv3a2 d.44.1.1 (A:127-237) Mn superoxide dismutase (MnSOD)
{Anabaena sp. [TaxId: 1167]}
Length = 111
Score = 112 bits (280), Expect = 1e-32
Identities = 43/111 (38%), Positives = 67/111 (60%), Gaps = 2/111 (1%)
Query: 105 GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP 164
GG+P+ D++ I +FGS ++ K + A GSGW WL +P+ + L++ +T NQD
Sbjct: 3 GGQPTGDIAQEINQTFGSFEEFKKQFNQAGGDRFGSGWVWLVRNPQGQ-LQVVSTPNQDN 61
Query: 165 LFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYAKA 215
G P+ G DVWEHAYYL+Y+N RP Y+ ++++NW+ IN +
Sbjct: 62 PI-MEGSYPIMGNDVWEHAYYLRYQNRRPEYLNNWWNVVNWSEINRRTQAS 111
>d2nyba2 d.44.1.1 (A:83-192) Fe superoxide dismutase (FeSOD)
{Escherichia coli [TaxId: 562]}
Length = 110
Score = 110 bits (277), Expect = 3e-32
Identities = 44/109 (40%), Positives = 65/109 (59%), Gaps = 2/109 (1%)
Query: 105 GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP 164
GG+P+ ++ AI ASFGS K + T A++ GSGW WL + K L I +T+N
Sbjct: 3 GGEPTGKVAEAIAASFGSFADFKAQFTDAAIKNFGSGWTWLVKNSDGK-LAIVSTSNAGT 61
Query: 165 LFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYDIMNWNYINELYA 213
TT PL +DVWEHAYY+ Y+N RP Y++ + ++NW ++ + A
Sbjct: 62 -PLTTDATPLLTVDVWEHAYYIDYRNARPGYLEHFWALVNWEFVAKNLA 109
>d1my6a2 d.44.1.1 (A:89-198) Fe superoxide dismutase (FeSOD)
{Thermosynechococcus elongatus [TaxId: 146786]}
Length = 110
Score = 110 bits (276), Expect = 6e-32
Identities = 42/110 (38%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
Query: 105 GGKPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDP 164
GG P+ D++ I ++FGS D+ K + A+ GSGW WL + +LK+ TAN +
Sbjct: 3 GGVPTGDVAARINSAFGSYDEFKAQFKNAAATQFGSGWAWLVLEA--GTLKVTKTANAEN 60
Query: 165 LFETTGLKPLFGIDVWEHAYYLQYKNVRPNYVKAIYD-IMNWNYINELYA 213
G PL IDVWEHAYYL Y+N RP+++ + ++NW+++ + A
Sbjct: 61 PL-VHGQVPLLTIDVWEHAYYLDYQNRRPDFIDNFLNQLVNWDFVAKNLA 109
>d1bsma1 a.2.11.1 (A:1-86) Cambialistic superoxide dismutase
{Propionibacterium shermanii [TaxId: 1752]}
Length = 86
Score = 100 bits (251), Expect = 1e-28
Identities = 42/86 (48%), Positives = 51/86 (59%)
Query: 20 GPIELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQ 79
LP+L Y Y LEP I+ EIMELHH KHH+ YV N AL+KL A D AI +
Sbjct: 1 AVYTLPELPYDYSALEPYISGEIMELHHDKHHKAYVDGANTALDKLAEARDKADFGAINK 60
Query: 80 LGPALKFNGGGHINHALFWKMLNKNG 105
L L FN GH+NH++FWK + G
Sbjct: 61 LEKDLAFNLAGHVNHSVFWKNMAPKG 86
>d1p7ga1 a.2.11.1 (A:12-103) Fe superoxide dismutase (FeSOD)
{Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Length = 92
Score = 100 bits (250), Expect = 2e-28
Identities = 38/87 (43%), Positives = 47/87 (54%)
Query: 20 GPIELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQ 79
LP L Y Y LEP I++EIM+LHH KHHQ YV NAALEKL+ I
Sbjct: 5 KRYTLPPLPYAYNALEPYISAEIMQLHHQKHHQGYVNGANAALEKLEKFRKGEAQIDIRA 64
Query: 80 LGPALKFNGGGHINHALFWKMLNKNGG 106
+ L F+ GHI H++FW + G
Sbjct: 65 VLRDLSFHLNGHILHSIFWPNMAPPGK 91
>d1kkca1 a.2.11.1 (A:14-97) Mn superoxide dismutase (MnSOD)
{Aspergillus fumigatus [TaxId: 5085]}
Length = 84
Score = 100 bits (249), Expect = 3e-28
Identities = 46/79 (58%), Positives = 53/79 (67%)
Query: 23 ELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGP 82
LP L Y Y L+P I+ +IMELHH KHHQTYV NAALE K A D +V +
Sbjct: 4 TLPPLPYPYDALQPYISQQIMELHHKKHHQTYVNGLNAALEAQKKAAEATDVPKLVSVQQ 63
Query: 83 ALKFNGGGHINHALFWKML 101
A+KFNGGGHINH+LFWK L
Sbjct: 64 AIKFNGGGHINHSLFWKNL 82
>d1gv3a1 a.2.11.1 (A:25-126) Mn superoxide dismutase (MnSOD)
{Anabaena sp. [TaxId: 1167]}
Length = 102
Score = 100 bits (249), Expect = 5e-28
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 7/89 (7%)
Query: 20 GPIELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKA-------AVANN 72
P ELP L YGY LE I++E M+LHH KHH YV N N AL+K A+ +
Sbjct: 12 NPAELPPLPYGYDALEKAIDAETMKLHHDKHHAAYVNNLNNALKKHPELQNSSVEALLRD 71
Query: 73 DASAIVQLGPALKFNGGGHINHALFWKML 101
S + ++ NGGGH+NH +FW+++
Sbjct: 72 LNSVPEDIRTTVRNNGGGHLNHTIFWQIM 100
>d1idsa1 a.2.11.1 (A:2-85) Fe superoxide dismutase (FeSOD)
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 84
Score = 98.6 bits (245), Expect = 1e-27
Identities = 41/79 (51%), Positives = 50/79 (63%)
Query: 23 ELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGP 82
LP LD+ Y LEP I+ +I ELHHSKHH TYV N A+ KL+ A A D SAI+
Sbjct: 4 TLPDLDWDYGALEPHISGQINELHHSKHHATYVKGANDAVAKLEEARAKEDHSAILLNEK 63
Query: 83 ALKFNGGGHINHALFWKML 101
L FN GH+NH ++WK L
Sbjct: 64 NLAFNLAGHVNHTIWWKNL 82
>d1jr9a1 a.2.11.1 (A:2-91) Mn superoxide dismutase (MnSOD) {Bacillus
halodenitrificans [TaxId: 1482]}
Length = 90
Score = 98.5 bits (245), Expect = 1e-27
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 23 ELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANND-------AS 75
ELP+L Y Y LEP I+ E M +HH+KHH TYVT N ALE + + +
Sbjct: 3 ELPELPYAYDALEPTIDKETMNIHHTKHHNTYVTKLNGALEGHEDLKNKSLNDLISNLDA 62
Query: 76 AIVQLGPALKFNGGGHINHALFWKML 101
+ A++ NGGGH NH+LFWK++
Sbjct: 63 VPENIRTAVRNNGGGHANHSLFWKLM 88
>d1ix9a1 a.2.11.1 (A:1-90) Mn superoxide dismutase (MnSOD)
{Escherichia coli [TaxId: 562]}
Length = 90
Score = 97.4 bits (242), Expect = 4e-27
Identities = 40/88 (45%), Positives = 47/88 (53%), Gaps = 7/88 (7%)
Query: 23 ELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQ--- 79
LP L Y Y LEP + + ME+HH+KHHQTYV N NAALE L I +
Sbjct: 3 TLPSLPYAYDALEPHFDKQTMEIHHTKHHQTYVNNANAALESLPEFANLPVEELITKLDQ 62
Query: 80 ----LGPALKFNGGGHINHALFWKMLNK 103
L+ N GGH NH+LFWK L K
Sbjct: 63 LPADKKTVLRNNAGGHANHSLFWKGLKK 90
>d1ma1a1 a.2.11.1 (A:4-91) Fe superoxide dismutase (FeSOD) {Archaeon
Methanobacterium thermoautotrophicum [TaxId: 145262]}
Length = 88
Score = 96.6 bits (240), Expect = 7e-27
Identities = 35/92 (38%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 19 QGPIELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIV 78
+ ELP+L Y Y LEP I+ E + +HH KHHQ YV NA L KL A ++ I
Sbjct: 2 KKFYELPELPYPYDALEPHISREQLTIHHQKHHQAYVDGANALLRKLDEARESDTDVDIK 61
Query: 79 QLGPALKFNGGGHINHALFWKMLNKNGGKPSD 110
L F+ GG++ H FW + P+D
Sbjct: 62 AALKELSFHVGGYVLHLFFWGNM-----GPAD 88
>d2p4ka1 a.2.11.1 (A:1-83) Mn superoxide dismutase (MnSOD) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 83
Score = 96.3 bits (239), Expect = 9e-27
Identities = 45/79 (56%), Positives = 54/79 (68%)
Query: 23 ELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGP 82
LP L Y Y LEP IN++IM+LHHSKHH V N N EK + A+A D +A + L P
Sbjct: 3 SLPDLPYDYGALEPHINAQIMQLHHSKHHAANVNNLNVTEEKYQEALAKGDVTAQIALQP 62
Query: 83 ALKFNGGGHINHALFWKML 101
ALKFNGGGHINH++FW L
Sbjct: 63 ALKFNGGGHINHSIFWTNL 81
>d1mnga1 a.2.11.1 (A:1-92) Mn superoxide dismutase (MnSOD) {Thermus
thermophilus [TaxId: 274]}
Length = 92
Score = 95.5 bits (237), Expect = 2e-26
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 7/88 (7%)
Query: 21 PIELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQL 80
P +LP L Y Y+ LEP I+++ ME+HH KHH YVTN NAALEK + L
Sbjct: 3 PFKLPDLGYPYEALEPHIDAKTMEIHHQKHHGAYVTNLNAALEKYPYLHGVEVEVLLRHL 62
Query: 81 G-------PALKFNGGGHINHALFWKML 101
A++ NGGGH+NH+LFW++L
Sbjct: 63 AALPQDIQTAVRNNGGGHLNHSLFWRLL 90
>d1wb8a1 a.2.11.1 (A:4-92) Fe superoxide dismutase (FeSOD) {Archaeon
Sulfolobus solfataricus [TaxId: 2287]}
Length = 89
Score = 94.3 bits (234), Expect = 5e-26
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 3/82 (3%)
Query: 23 ELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDAS---AIVQ 79
ELP L Y LEP I+ +I+++H++ HH+ YV N+ LE+L+ V + + I
Sbjct: 7 ELPPLPYKIDALEPYISKDIIDVHYNGHHKGYVNGANSLLERLEKVVKGDLQTGQYDIQG 66
Query: 80 LGPALKFNGGGHINHALFWKML 101
+ L FN GH HAL+W+ +
Sbjct: 67 IIRGLTFNINGHKLHALYWENM 88
>d1uera1 a.2.11.1 (A:1-84) Cambialistic superoxide dismutase
{Porphyromonas gingivalis [TaxId: 837]}
Length = 84
Score = 91.2 bits (226), Expect = 8e-25
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 1/79 (1%)
Query: 23 ELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGP 82
EL L Y L PVI+ E +E HH KH +TYV N N + + A+ + + +
Sbjct: 4 ELISLPYAVDALAPVISKETVEFHHGKHLKTYVDNLNKLIIGTEFENADLNTI-VQKSEG 62
Query: 83 ALKFNGGGHINHALFWKML 101
+ N G +NH L++
Sbjct: 63 GIFNNAGQTLNHNLYFTQF 81
>d2nyba1 a.2.11.1 (A:1-82) Fe superoxide dismutase (FeSOD)
{Escherichia coli [TaxId: 562]}
Length = 82
Score = 90.4 bits (224), Expect = 1e-24
Identities = 27/79 (34%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
Query: 23 ELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLGP 82
ELP L Y L P I++E +E H+ KHHQTYVTN N ++ + I
Sbjct: 3 ELPALPYAKDALAPHISAETIEYHYGKHHQTYVTNLNNLIKGTAFE-GKSLEEIIRSSEG 61
Query: 83 ALKFNGGGHINHALFWKML 101
+ N NH +W L
Sbjct: 62 GVFNNAAEVWNHTFYWNCL 80
>d1my6a1 a.2.11.1 (A:1-88) Fe superoxide dismutase (FeSOD)
{Thermosynechococcus elongatus [TaxId: 146786]}
Length = 88
Score = 86.6 bits (214), Expect = 6e-23
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 5/84 (5%)
Query: 23 ELPKLDYGYKDLEPV-INSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQLG 81
L + LEP ++++ +E H+ KHH+ YV N N + + A + + G
Sbjct: 3 VQEPLPFDPGALEPYGMSAKTLEFHYGKHHKGYVDNLNKLTQDTELADKSLEDVIRTTYG 62
Query: 82 PALK----FNGGGHINHALFWKML 101
A K N NH FW L
Sbjct: 63 DAAKVGIFNNAAQVWNHTFFWNSL 86
>d1unfx1 a.2.11.1 (X:14-104) Fe superoxide dismutase (FeSOD) {Cowpea
(Vigna unguiculata) [TaxId: 3917]}
Length = 91
Score = 84.7 bits (209), Expect = 3e-22
Identities = 21/86 (24%), Positives = 33/86 (38%), Gaps = 4/86 (4%)
Query: 20 GPIELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAAVANNDASAIVQ 79
EL Y LEPV++ + +E H KHH+TYV N + + + + +
Sbjct: 4 AKFELKPPPYPLNGLEPVMSQQTLEFHWGKHHRTYVENLKKQVVGTELDGKSLEEIIVTA 63
Query: 80 LGP----ALKFNGGGHINHALFWKML 101
N NH FW+ +
Sbjct: 64 YNKGDILPAFNNAAQVWNHDFFWECM 89
>d1coja1 a.2.11.1 (A:2-90) Fe superoxide dismutase (FeSOD) {Aquifex
pyrophilus [TaxId: 2714]}
Length = 89
Score = 80.4 bits (198), Expect = 1e-20
Identities = 25/85 (29%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 23 ELPKLDYGYKDLEPVINSEIMELHHSKHHQTYVTNYNAALEKLKAA------VANNDASA 76
+L D+ I++E +E H H++ YV YN EKL AN + S
Sbjct: 3 KLEPKDHLKPQNLEGISNEQIEPHFEAHYKGYVAKYNEIQEKLADQNFADRSKANQNYSE 62
Query: 77 IVQLGPALKFNGGGHINHALFWKML 101
+L FN G + H L++ ML
Sbjct: 63 YRELKVEETFNYMGVVLHELYFGML 87
>d1jnda1 c.1.8.5 (A:2-278,A:371-420) Imaginal disc growth factor-2
{Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Length = 327
Score = 25.9 bits (56), Expect = 3.8
Identities = 10/71 (14%), Positives = 23/71 (32%), Gaps = 4/71 (5%)
Query: 91 HINHALFWKMLNKNGGK--PSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYD 148
H+ + L + ++ + K F + LK + V + G + D
Sbjct: 34 HLVYGYAG--LRGENLQAYSMNENLDIYKHQFSEVTSLKRKYPHLKVLLSVGGDHDIDPD 91
Query: 149 PKSKSLKIATT 159
+K + +
Sbjct: 92 HPNKYIDLLEG 102
>d2fn0a1 d.161.1.1 (A:2-434) Salicylate synthetase Irp9 {Yersinia
enterocolitica [TaxId: 630]}
Length = 433
Score = 25.6 bits (55), Expect = 5.4
Identities = 11/49 (22%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Query: 122 SLDKLKDELTAASVGIQGSGW---GWLGYDPKSKSLKIATTANQDPLFE 167
++D + D Q G G +G++ + + IA A + PL
Sbjct: 71 AVDSIADCARRFMAHPQVKGRRVYGQVGFNFAAHARGIAFNAGEWPLLT 119
>d1rh1a2 f.1.1.1 (A:313-511) Colicin B C-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 199
Score = 24.8 bits (54), Expect = 7.9
Identities = 11/60 (18%), Positives = 25/60 (41%), Gaps = 2/60 (3%)
Query: 107 KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDPLF 166
+ + NA KA + + + ++ A + + + + + KS++ T N PL
Sbjct: 75 TDKEAIVNAWKAF--NAEDMGNKFAALGKTFKAADYAIKANNIREKSIEGYQTGNWGPLM 132
>d1a87a_ f.1.1.1 (A:) Colicin N {Escherichia coli [TaxId: 562]}
Length = 297
Score = 24.9 bits (54), Expect = 8.6
Identities = 10/63 (15%), Positives = 21/63 (33%), Gaps = 2/63 (3%)
Query: 107 KPSDDLSNAIKASFGSLDKLKDELTAASVGIQGSGWGWLGYDPKSKSLKIATTANQDPLF 166
D + NA K + + +++ + + + KS++ T N PL
Sbjct: 171 SDKDAIVNAWKQV--NAKDMANKIGNLGKAFKVADLAIKVEKIREKSIEGYNTGNWGPLL 228
Query: 167 ETT 169
Sbjct: 229 LEV 231
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.315 0.133 0.399
Gapped
Lambda K H
0.267 0.0543 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 823,961
Number of extensions: 36994
Number of successful extensions: 128
Number of sequences better than 10.0: 1
Number of HSP's gapped: 95
Number of HSP's successfully gapped: 46
Length of query: 218
Length of database: 2,407,596
Length adjustment: 82
Effective length of query: 136
Effective length of database: 1,281,736
Effective search space: 174316096
Effective search space used: 174316096
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 51 (23.8 bits)