RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16345
(121 letters)
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal
domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 239
Score = 86.4 bits (214), Expect = 1e-22
Identities = 26/95 (27%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Query: 21 ELVFSGLSVTLDKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRL 80
E+ L+ + ++ +K GE L ++GPSGCGKTT L +AG + G I
Sbjct: 6 EVKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYF 65
Query: 81 NKERLN--KRWKRKICYVLQQDIFFPELTLRQTLE 113
+ R I V Q +P +T+ + +
Sbjct: 66 GDRDVTYLPPKDRNISMVFQSYAVWPHMTVYENIA 100
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 81.5 bits (201), Expect = 5e-21
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 22 LVFSGLSVTLDKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLN 81
L LSV DK P+L+ ++ ++ G ++ GP+G GKTTLL ++ +K G I N
Sbjct: 3 LEIRDLSVGYDK-PVLERITMTIEKGNVVNFHGPNGIGKTTLLKTISTYLKPLKGEIIYN 61
Query: 82 KERLNKRWKRKICYVLQQDIFFPELTLRQTLEV 114
+ K KI ++ ++ I ++++ L+
Sbjct: 62 GVP-ITKVKGKIFFLPEEIIVPRKISVEDYLKA 93
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 81.9 bits (202), Expect = 7e-21
Identities = 23/98 (23%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 22 LVFSGLSVTLDKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLN 81
L + + L VS V G++ ++GP+G GK+TL+N + G +K D G +
Sbjct: 5 LRTENIVKYFGEFKALDGVSISVNKGDVTLIIGPNGSGKSTLINVITGFLKADEGRVYFE 64
Query: 82 KERLN-----KRWKRKICYVLQQDIFFPELTLRQTLEV 114
+ + + + I Q E+T+ + L +
Sbjct: 65 NKDITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLI 102
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 81.0 bits (200), Expect = 2e-20
Identities = 26/104 (25%), Positives = 51/104 (49%), Gaps = 5/104 (4%)
Query: 14 PLSHRPLELVFSGLSVTL--DKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRV 71
P+ + + +S ++ PILKD++ ++ GE +A +G SG GK+TL+N +
Sbjct: 9 PIEIKQGRIDIDHVSFQYNDNEAPILKDINLSIEKGETVAFVGMSGGGKSTLINLIPRFY 68
Query: 72 KLDSGVIRLNKERLNK---RWKRKICYVLQQDIFFPELTLRQTL 112
+ SG I ++ + R ++QQD T+++ +
Sbjct: 69 DVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVKENI 112
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 80.3 bits (198), Expect = 4e-20
Identities = 20/76 (26%), Positives = 40/76 (52%), Gaps = 9/76 (11%)
Query: 29 VTLDKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKR 88
+ L P+LK+++ ++ GE+LA+ G +G GKT+LL + G ++ G+I+ +
Sbjct: 44 LCLVGNPVLKNINLNIEKGEMLAITGSTGSGKTSLLMLILGELEASEGIIKHS------- 96
Query: 89 WKRKICYVLQQDIFFP 104
++ + Q P
Sbjct: 97 --GRVSFCSQFSWIMP 110
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine
permease {Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 79.9 bits (197), Expect = 5e-20
Identities = 23/109 (21%), Positives = 46/109 (42%), Gaps = 17/109 (15%)
Query: 21 ELVFSGLSVTLDKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRL 80
+L L +LK VS + G++++++G SG GK+T L C+ K G I +
Sbjct: 2 KLHVIDLHKRYGGHEVLKGVSLQARAGDVISIIGSSGSGKSTFLRCINFLEKPSEGAIIV 61
Query: 81 NKERLN-----------------KRWKRKICYVLQQDIFFPELTLRQTL 112
N + +N + + ++ V Q + +T+ + +
Sbjct: 62 NGQNINLVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENV 110
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 79.5 bits (196), Expect = 5e-20
Identities = 21/77 (27%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 32 DKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLN----K 87
D IL+D+S +P ++A GPSG GK+T+ + L + +G I ++ + ++ +
Sbjct: 13 DSEQILRDISFEAQPNSIIAFAGPSGGGKSTIFSLLERFYQPTAGEITIDGQPIDNISLE 72
Query: 88 RWKRKICYVLQQDIFFP 104
W+ +I +V Q
Sbjct: 73 NWRSQIGFVSQDSAIMA 89
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 79.3 bits (195), Expect = 6e-20
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Query: 22 LVFSGLSVTLDKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLN 81
+V L + K+ ILK +S ++ GE+ ++GP+G GKTT L ++ +K SG++ +
Sbjct: 3 VVVKDLRKRIGKKEILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVF 62
Query: 82 ---KERLNKRWKRKICYVLQQDIFFPELTLRQ 110
++ I Y+ ++ + + +
Sbjct: 63 GKNVVEEPHEVRKLISYLPEEAGAYRNMQGIE 94
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 79.4 bits (195), Expect = 7e-20
Identities = 26/99 (26%), Positives = 43/99 (43%), Gaps = 9/99 (9%)
Query: 21 ELVFSGLSVTLD--KRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVI 78
++ +S K L +V+ ++ GE ++GPSG GKTT + +AG +G +
Sbjct: 3 RIIVKNVSKVFKKGKVVALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGEL 62
Query: 79 RL-------NKERLNKRWKRKICYVLQQDIFFPELTLRQ 110
N + + RKI V Q +P LT +
Sbjct: 63 YFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPNLTAFE 101
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 75.0 bits (184), Expect = 2e-18
Identities = 24/91 (26%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 24 FSGLSVTLDKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKE 83
++ + + KD++ + GE + +GPSGCGK+TLL +AG + SG + + ++
Sbjct: 3 LQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETITSGDLFIGEK 62
Query: 84 RLNKRWKRK--ICYVLQQDIFFPELTLRQTL 112
R+N + + V Q +P L++ + +
Sbjct: 63 RMNDTPPAERGVGMVFQSYALYPHLSVAENM 93
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 74.2 bits (182), Expect = 6e-18
Identities = 24/106 (22%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 21 ELVFSGLSVTLDKRP---ILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGV 77
+ F +S RP +L+ ++ ++PGE+ A++GP+G GK+T+ L + G
Sbjct: 11 LVQFQDVSFAYPNRPDVLVLQGLTFTLRPGEVTALVGPNGSGKSTVAALLQNLYQPTGGQ 70
Query: 78 IRLNKERLN----KRWKRKICYVLQQDIFFPELTLRQTLEVSIADE 119
+ L+ + L + R++ V Q+ F +L++ + + +
Sbjct: 71 LLLDGKPLPQYEHRYLHRQVAAVGQEPQVFG-RSLQENIAYGLTQK 115
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 73.8 bits (181), Expect = 8e-18
Identities = 20/90 (22%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 21 ELVFSGLSVT--LDKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVI 78
++ F + D IL +++ +K GE++ ++G SG GK+TL + ++G +
Sbjct: 1 DITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQV 60
Query: 79 RLNKERLNK----RWKRKICYVLQQDIFFP 104
++ L +R++ VLQ ++
Sbjct: 61 LIDGHDLALADPNWLRRQVGVVLQDNVLLN 90
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 73.4 bits (180), Expect = 1e-17
Identities = 21/103 (20%), Positives = 43/103 (41%), Gaps = 11/103 (10%)
Query: 22 LVFSGLSVTLDKR----PILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGV 77
+ S ++ + L +VS V G++ V+G SG GK+TL+ C+ + G
Sbjct: 2 IKLSNITKVFHQGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGS 61
Query: 78 IRLNKERLNK-------RWKRKICYVLQQDIFFPELTLRQTLE 113
+ ++ + L + +R+I + Q T+ +
Sbjct: 62 VLVDGQELTTLSESELTKARRQIGMIFQHFNLLSSRTVFGNVA 104
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 73.2 bits (179), Expect = 1e-17
Identities = 26/91 (28%), Positives = 42/91 (46%), Gaps = 3/91 (3%)
Query: 22 LVFSGLSVTLDKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLN 81
+ LS L ++S V+ GE ++GP+G GKT L +AG DSG I L+
Sbjct: 2 IEIESLSRKWKNF-SLDNLSLKVESGEYFVILGPTGAGKTLFLELIAGFHVPDSGRILLD 60
Query: 82 KERLNKRWKRKIC--YVLQQDIFFPELTLRQ 110
+ + K +V Q FP + +++
Sbjct: 61 GKDVTDLSPEKHDIAFVYQNYSLFPHMNVKK 91
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 73.4 bits (180), Expect = 1e-17
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Query: 22 LVFSGLSVTLDKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLN 81
+ + + ++++S VK GE + ++GPSGCGKTT L +AG + G I +
Sbjct: 4 VRLVDVWKVFGEVTAVREMSLEVKDGEFMILLGPSGCGKTTTLRMIAGLEEPSRGQIYIG 63
Query: 82 --------KERLNKRWKRKICYVLQQDIFFPELTLRQ 110
K R I V Q +P +T+
Sbjct: 64 DKLVADPEKGIFVPPKDRDIAMVFQSYALYPHMTVYD 100
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 72.6 bits (178), Expect = 2e-17
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 35 PILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLN-------- 86
LK+V+ +K GE +++MGPSG GK+T+LN + K G + ++ + N
Sbjct: 19 YALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELT 78
Query: 87 KRWKRKICYVLQQDIFFPELTLRQTLEV 114
K + KI +V QQ P LT + +E+
Sbjct: 79 KIRRDKIGFVFQQFNLIPLLTALENVEL 106
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 72.6 bits (178), Expect = 2e-17
Identities = 27/96 (28%), Positives = 44/96 (45%), Gaps = 5/96 (5%)
Query: 22 LVFSGLSVTLDKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLN 81
L L V +K + V G+++ ++G +G GKTT L+ +AG V+ G I N
Sbjct: 7 LEVQSLHVYYGAIHAIKGIDLKVPRGQIVTLIGANGAGKTTTLSAIAGLVRAQKGKIIFN 66
Query: 82 -----KERLNKRWKRKICYVLQQDIFFPELTLRQTL 112
+ + + I V + FPELT+ + L
Sbjct: 67 GQDITNKPAHVINRMGIALVPEGRRIFPELTVYENL 102
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding
protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId:
2234]}
Length = 240
Score = 72.0 bits (176), Expect = 4e-17
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 27 LSVTLDKRPILKDVSGVV---KPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKE 83
L V +KR L + V + ++GP+G GK+ L +AG VK D G +RLN
Sbjct: 3 LKVRAEKR--LGNFRLNVDFEMGRDYCVLLGPTGAGKSVFLELIAGIVKPDRGEVRLNGA 60
Query: 84 RLN--KRWKRKICYVLQQDIFFPELTLRQ 110
+ +R I +V Q FP L++ +
Sbjct: 61 DITPLPPERRGIGFVPQDYALFPHLSVYR 89
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter
MsbA, C-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 253
Score = 70.3 bits (172), Expect = 2e-16
Identities = 21/90 (23%), Positives = 43/90 (47%), Gaps = 6/90 (6%)
Query: 21 ELVFSGLSVTLDKR--PILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVI 78
+L F ++ T R P L++++ + G+ +A++G SG GK+T+ + + +D G I
Sbjct: 13 DLEFRNVTFTYPGREVPALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHI 72
Query: 79 RLNKERLN----KRWKRKICYVLQQDIFFP 104
++ L + ++ V Q F
Sbjct: 73 LMDGHDLREYTLASLRNQVALVSQNVHLFN 102
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 70.0 bits (171), Expect = 2e-16
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 5/86 (5%)
Query: 31 LDKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLN---- 86
+ + L +SG V+ GE+L ++GP+G GK+TLL +AG G I+ + L
Sbjct: 9 VAESTRLGPLSGEVRAGEILHLVGPNGAGKSTLLARMAGMTS-GKGSIQFAGQPLEAWSA 67
Query: 87 KRWKRKICYVLQQDIFFPELTLRQTL 112
+ Y+ QQ + L
Sbjct: 68 TKLALHRAYLSQQQTPPFATPVWHYL 93
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein
Aq_1292 {Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 54.6 bits (130), Expect = 5e-11
Identities = 11/57 (19%), Positives = 22/57 (38%)
Query: 50 LAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICYVLQQDIFFPEL 106
+ + G G GKTTL+ + R+ + + R + KR ++ +
Sbjct: 3 IIITGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIF 59
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 38.8 bits (89), Expect = 4e-05
Identities = 12/57 (21%), Positives = 21/57 (36%)
Query: 47 GELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICYVLQQDIFF 103
G ++ + GPS GK+T++ CL R+ + + Y F
Sbjct: 2 GRVVVLSGPSAVGKSTVVRCLRERIPNLHFSVSATTRAPRPGEVDGVDYHFIDPTRF 58
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 38.5 bits (88), Expect = 5e-05
Identities = 11/69 (15%), Positives = 20/69 (28%)
Query: 45 KPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICYVLQQDIFFP 104
+ +MG SG GK+ + + +A ++ R N + D
Sbjct: 4 HDHHIYVLMGVSGSGKSAVASEVAHQLHAAFLDGDFLHPRRNIEKMASGEPLNDDDRKPW 63
Query: 105 ELTLRQTLE 113
L
Sbjct: 64 LQALNDAAF 72
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 292
Score = 38.6 bits (88), Expect = 7e-05
Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Query: 37 LKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICY 95
D K G + ++G +G GK++LL+ + + + + K+ K R
Sbjct: 14 HSDTVVEFKEG-INLIIGQNGSGKSSLLDAILVGLYWPLRIKDIKKDEFTKVGARDTYI 71
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 37.9 bits (87), Expect = 1e-04
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 47 GELLAVMGPSGCGKTTLLNCLAGRVKLD 74
G L V PSG GK++L+ L L
Sbjct: 2 GTLYIVSAPSGAGKSSLIQALLKTQPLY 29
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 37.2 bits (85), Expect = 1e-04
Identities = 11/38 (28%), Positives = 16/38 (42%), Gaps = 5/38 (13%)
Query: 47 GELLAVMGPSGCGKTTLLNCLAGR-----VKLDSGVIR 79
G +L + G G GK+T+ LA V S +
Sbjct: 4 GNILLLSGHPGSGKSTIAEALANLPGVPKVHFHSDDLW 41
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA
{Escherichia coli [TaxId: 562]}
Length = 274
Score = 36.2 bits (82), Expect = 4e-04
Identities = 15/58 (25%), Positives = 28/58 (48%), Gaps = 8/58 (13%)
Query: 16 SHRPLELV--FSGLSVTLDKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRV 71
+H+P+ ++ F+ P L V + G + A++ P G GK+ L LA ++
Sbjct: 2 THKPINILEAFAA------APPPLDYVLPNMVAGTVGALVSPGGAGKSMLALQLAAQI 53
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 35.8 bits (81), Expect = 5e-04
Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 47 GELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRW 89
++ + G S GK+ ++ CL L + + L +
Sbjct: 3 TRMIILNGGSSAGKSGIVRCLQSV--LPEPWLAFGVDSLIEAM 43
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 35.8 bits (81), Expect = 5e-04
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 52 VMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICY 95
+ GP G GKTTL++ + +K + ++ R+I +
Sbjct: 6 LTGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGF 49
>d1wf3a1 c.37.1.8 (A:3-180) GTPase Era, N-terminal domain {Thermus
thermophilus [TaxId: 274]}
Length = 178
Score = 35.1 bits (79), Expect = 8e-04
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 6/30 (20%)
Query: 41 SGVVKPGELLAVMGPSGCGKTTLLNCLAGR 70
SG V A++G GK+TLLN L G
Sbjct: 5 SGFV------AIVGKPNVGKSTLLNNLLGV 28
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase),
helicase domain {Bacteriophage T7 [TaxId: 10760]}
Length = 277
Score = 34.6 bits (78), Expect = 0.001
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 37 LKDVSGVVKPGELLAVMGPSGCGKTTLLNCLA 68
+ D + + GE++ V SG GK+T + A
Sbjct: 25 INDKTLGARGGEVIMVTSGSGMGKSTFVRQQA 56
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 34.5 bits (78), Expect = 0.001
Identities = 10/22 (45%), Positives = 13/22 (59%)
Query: 49 LLAVMGPSGCGKTTLLNCLAGR 70
+ + GPSG GK+TLL L
Sbjct: 3 PIVISGPSGTGKSTLLKKLFAE 24
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 34.4 bits (78), Expect = 0.001
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 49 LLAVMGPSGCGKTTLLNCLAGR 70
L ++G G G+ + N L +
Sbjct: 5 TLVLLGAHGVGRRHIKNTLITK 26
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 400
Score = 34.7 bits (79), Expect = 0.001
Identities = 11/53 (20%), Positives = 21/53 (39%)
Query: 50 LAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICYVLQQDIF 102
+AV G +G GK++ +N L G + G + + + +F
Sbjct: 59 VAVTGETGSGKSSFINTLRGIGNEEEGAAKTGVVEVTMERHPYKHPNIPNVVF 111
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 34.2 bits (77), Expect = 0.002
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 49 LLAVMGPSGCGKTTLLNCLA 68
+ + GPSG GK+TLL L
Sbjct: 2 PVVLSGPSGAGKSTLLKKLF 21
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase
TrmE (MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 34.0 bits (76), Expect = 0.002
Identities = 10/21 (47%), Positives = 14/21 (66%)
Query: 50 LAVMGPSGCGKTTLLNCLAGR 70
+ + G GK++LLN LAGR
Sbjct: 4 VVIAGRPNAGKSSLLNALAGR 24
>d1svia_ c.37.1.8 (A:) Probable GTPase EngB {Bacillus subtilis
[TaxId: 1423]}
Length = 195
Score = 34.0 bits (76), Expect = 0.002
Identities = 10/56 (17%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Query: 51 AVMGPSGCGKTTLLNCLAG--RVKLDSGVIRLNKERLNKRWKRKICYVLQQDIFFP 104
A+ G S GK++ +N L + S + ++ +V F
Sbjct: 27 ALAGRSNVGKSSFINSLINRKNLARTSSKPGKTQTLNFYIINDELHFVDVPGYGFA 82
>d1egaa1 c.37.1.8 (A:4-182) GTPase Era, N-terminal domain
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 33.9 bits (76), Expect = 0.002
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 51 AVMGPSGCGKTTLLNCLAGR 70
A++G GK+TLLN L G+
Sbjct: 9 AIVGRPNVGKSTLLNKLLGQ 28
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 171
Score = 34.0 bits (76), Expect = 0.002
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 51 AVMGPSGCGKTTLLNCLAGR 70
++G GK+TL N L +
Sbjct: 4 LIVGRPNVGKSTLFNKLVKK 23
>d1n0wa_ c.37.1.11 (A:) DNA repair protein Rad51, catalytic domain
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 33.6 bits (75), Expect = 0.003
Identities = 8/31 (25%), Positives = 14/31 (45%)
Query: 41 SGVVKPGELLAVMGPSGCGKTTLLNCLAGRV 71
G ++ G + + G GKT + + LA
Sbjct: 17 QGGIETGSITEMFGEFRTGKTQICHTLAVTC 47
>d1nrjb_ c.37.1.8 (B:) Signal recognition particle receptor
beta-subunit {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 209
Score = 33.5 bits (75), Expect = 0.003
Identities = 10/47 (21%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Query: 50 LAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICYV 96
+ + GP GKT+LL L + V+ + V
Sbjct: 6 IIIAGPQNSGKTSLLTLLTTD-SVRPTVVSQEPLSAADYDGSGVTLV 51
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 33.5 bits (75), Expect = 0.003
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 49 LLAVMGPSGCGKTTLLNCLAGR 70
L + GP+G GK+T LA +
Sbjct: 4 LYIITGPAGVGKSTTCKRLAAQ 25
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding
protein 1 (GBP1), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 277
Score = 33.1 bits (75), Expect = 0.004
Identities = 13/34 (38%), Positives = 23/34 (67%)
Query: 37 LKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGR 70
LK +S + +P ++A++G GK+ L+N LAG+
Sbjct: 22 LKILSAITQPMVVVAIVGLYRTGKSYLMNKLAGK 55
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARL1 [TaxId: 9606]}
Length = 169
Score = 32.8 bits (73), Expect = 0.005
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
+ ++G G GKTT+L L
Sbjct: 8 ILILGLDGAGKTTILYRLQV 27
>d1ksha_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL2 [TaxId: 10090]}
Length = 165
Score = 32.7 bits (73), Expect = 0.005
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
L ++G GKTT+L G
Sbjct: 5 LLMLGLDNAGKTTILKKFNG 24
>d1lw7a2 c.37.1.1 (A:220-411) Transcriptional regulator NadR,
ribosylnicotinamide kinase domain {Haemophilus
influenzae [TaxId: 727]}
Length = 192
Score = 32.7 bits (73), Expect = 0.005
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 51 AVMGPSGCGKTTLLNCLA 68
A++G GK+ L+N LA
Sbjct: 11 AILGGESSGKSVLVNKLA 28
>d1mkya2 c.37.1.8 (A:173-358) Probable GTPase Der, N-terminal and
middle domains {Thermotoga maritima [TaxId: 2336]}
Length = 186
Score = 32.7 bits (73), Expect = 0.006
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 51 AVMGPSGCGKTTLLNCLAGR 70
A++G GK+TL N + +
Sbjct: 12 AIVGRPNVGKSTLFNAILNK 31
>d1zd9a1 c.37.1.8 (A:18-181) ADP-ribosylation factor {Human (Homo
sapiens), ARL8A [TaxId: 9606]}
Length = 164
Score = 32.7 bits (73), Expect = 0.006
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
L ++G GKTT +N +A
Sbjct: 5 LTLVGLQYSGKTTFVNVIAS 24
>d2cxxa1 c.37.1.8 (A:2-185) GTP-binding protein engB {Pyrococcus
horikoshii [TaxId: 53953]}
Length = 184
Score = 32.7 bits (73), Expect = 0.006
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 51 AVMGPSGCGKTTLLNCLAGR 70
G S GK+TL+ L G+
Sbjct: 4 IFAGRSNVGKSTLIYRLTGK 23
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic
domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 251
Score = 32.8 bits (73), Expect = 0.007
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 41 SGVVKPGELLAVMGPSGCGKTTLLNCLAGRV 71
G V+ G + + G GK+ L + LA
Sbjct: 28 GGGVETGSITELFGEFRTGKSQLCHTLAVTC 58
>d1np6a_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Escherichia coli [TaxId:
562]}
Length = 170
Score = 32.3 bits (72), Expect = 0.007
Identities = 11/19 (57%), Positives = 11/19 (57%)
Query: 50 LAVMGPSGCGKTTLLNCLA 68
LA SG GKTTLL L
Sbjct: 5 LAFAAWSGTGKTTLLKKLI 23
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus
solfataricus [TaxId: 2287]}
Length = 283
Score = 32.4 bits (72), Expect = 0.008
Identities = 4/26 (15%), Positives = 11/26 (42%)
Query: 47 GELLAVMGPSGCGKTTLLNCLAGRVK 72
+ V+G GK++++ +
Sbjct: 29 APITLVLGLRRTGKSSIIKIGINELN 54
>d1yrba1 c.37.1.10 (A:1-244) ATP(GTP)-binding protein PAB0955
{Pyrococcus abyssi [TaxId: 29292]}
Length = 244
Score = 32.3 bits (72), Expect = 0.008
Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 9/43 (20%)
Query: 52 VMGPSGCGKTTLLNCL---------AGRVKLDSGVIRLNKERL 85
+G +G GKTTL V LD+GV L E
Sbjct: 5 FVGTAGSGKTTLTGEFGRYLEDNYKVAYVNLDTGVKELPYEPS 47
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 32.0 bits (71), Expect = 0.008
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 50 LAVMGPSGCGKTTLLNCLAGR 70
+ ++G G GK+ L G
Sbjct: 4 VLLLGAPGVGKSALARIFGGV 24
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic
domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Length = 258
Score = 32.4 bits (72), Expect = 0.009
Identities = 8/57 (14%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Query: 41 SGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSG-VIRLNKERLNKRWKRKICYV 96
G ++ + G G GKT +++ ++ + + K Y+
Sbjct: 28 GGGLESQSVTEFAGVFGSGKTQIMHQSCVNLQNPEFLFYDEEAVSKGEVAQPKAVYI 84
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 443
Score = 32.4 bits (73), Expect = 0.009
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 52 VMGPSGCGKTTLLNCLAG 69
++GP+G GKT + LA
Sbjct: 54 MIGPTGVGKTEIARRLAK 71
>d1xzpa2 c.37.1.8 (A:212-371) TrmE GTPase domain {Thermotoga
maritima [TaxId: 2336]}
Length = 160
Score = 31.9 bits (71), Expect = 0.010
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 50 LAVMGPSGCGKTTLLNCLAGR 70
+ ++G GK+TLLN L
Sbjct: 3 MVIVGKPNVGKSTLLNRLLNE 23
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 166
Score = 32.0 bits (71), Expect = 0.010
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
L +G GKTTLL+ L
Sbjct: 3 LLFLGLDNAGKTTLLHMLKN 22
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 31.8 bits (71), Expect = 0.012
Identities = 7/28 (25%), Positives = 12/28 (42%)
Query: 41 SGVVKPGELLAVMGPSGCGKTTLLNCLA 68
G ++ G +G GKT L++
Sbjct: 20 GGGFFKDSIILATGATGTGKTLLVSRFV 47
>d2g3ya1 c.37.1.8 (A:73-244) GTP-binding protein GEM {Human (Homo
sapiens) [TaxId: 9606]}
Length = 172
Score = 31.7 bits (70), Expect = 0.012
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
+ ++G G GK+TL N AG
Sbjct: 6 VVLIGEQGVGKSTLANIFAG 25
>d1uj2a_ c.37.1.6 (A:) Uridine-cytidine kinase 2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 213
Score = 31.9 bits (71), Expect = 0.012
Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 11/59 (18%)
Query: 49 LLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICYVLQQDIFFPELT 107
L+ V G + GK+++ + L + ++ R K+ +L QD F+ LT
Sbjct: 4 LIGVSGGTASGKSSVCAKIV---------QLLGQNEVDYRQKQ--VVILSQDSFYRVLT 51
>d1puia_ c.37.1.8 (A:) Probable GTPase EngB {Escherichia coli
[TaxId: 562]}
Length = 188
Score = 31.7 bits (70), Expect = 0.013
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 51 AVMGPSGCGKTTLLNCLAG 69
A G S GK++ LN L
Sbjct: 20 AFAGRSNAGKSSALNTLTN 38
>d1rz3a_ c.37.1.6 (A:) Hypothetical protein rbstp0775 {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 198
Score = 31.7 bits (70), Expect = 0.013
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 49 LLAVMGPSGCGKTTLLNCLA 68
+L + G S GKTTL N L+
Sbjct: 24 VLGIDGLSRSGKTTLANQLS 43
>d1xjca_ c.37.1.10 (A:) Molybdopterin-guanine dinucleotide
biosynthesis protein MobB {Bacillus stearothermophilus
[TaxId: 1422]}
Length = 165
Score = 31.4 bits (70), Expect = 0.013
Identities = 7/23 (30%), Positives = 9/23 (39%)
Query: 50 LAVMGPSGCGKTTLLNCLAGRVK 72
V+G GKTTL+
Sbjct: 4 WQVVGYKHSGKTTLMEKWVAAAV 26
>d1ky3a_ c.37.1.8 (A:) Rab-related protein ypt7p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 175
Score = 31.6 bits (70), Expect = 0.014
Identities = 7/20 (35%), Positives = 13/20 (65%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
+ ++G SG GKT+L++
Sbjct: 5 VIILGDSGVGKTSLMHRYVN 24
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic
domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 254
Score = 31.6 bits (70), Expect = 0.014
Identities = 14/44 (31%), Positives = 20/44 (45%)
Query: 42 GVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERL 85
G ++ + V G G GKT L + LA V+L LN +
Sbjct: 31 GGIETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVI 74
>d2fh5b1 c.37.1.8 (B:63-269) Signal recognition particle receptor
beta-subunit {Mouse (Mus musculus) [TaxId: 10090]}
Length = 207
Score = 31.5 bits (70), Expect = 0.016
Identities = 10/53 (18%), Positives = 14/53 (26%), Gaps = 1/53 (1%)
Query: 51 AVMGPSGCGKTTLLNCLA-GRVKLDSGVIRLNKERLNKRWKRKICYVLQQDIF 102
+G GKT L L G+ + I + R L
Sbjct: 4 LFVGLCDSGKTLLFVRLLTGQYRDTQTSITDSSAIYKVNNNRGNSLTLIDLPG 56
>d1fzqa_ c.37.1.8 (A:) ADP-ribosylation factor {Mouse (Mus
musculus), ARL3 [TaxId: 10090]}
Length = 176
Score = 31.1 bits (69), Expect = 0.017
Identities = 9/20 (45%), Positives = 12/20 (60%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
+ ++G GKTTLL LA
Sbjct: 19 ILLLGLDNAGKTTLLKQLAS 38
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum
aerophilum [TaxId: 13773]}
Length = 276
Score = 31.3 bits (69), Expect = 0.018
Identities = 11/61 (18%), Positives = 17/61 (27%), Gaps = 3/61 (4%)
Query: 34 RPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKI 93
L++ ++G G GKT L L K + + R I
Sbjct: 33 GNWLRNPGHHYPR---ATLLGRPGTGKTVTLRKLWELYKDKTTARFVYINGFIYRNFTAI 89
Query: 94 C 94
Sbjct: 90 I 90
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 31.2 bits (69), Expect = 0.018
Identities = 7/48 (14%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
Query: 48 ELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICY 95
+++ +G G GK+T + G +N++ +
Sbjct: 3 KIILTIGCPGSGKSTWAREFIAKNP---GFYNINRDDYRQSIMAHEER 47
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus
[TaxId: 2261]}
Length = 369
Score = 31.3 bits (69), Expect = 0.019
Identities = 9/50 (18%), Positives = 23/50 (46%), Gaps = 9/50 (18%)
Query: 51 AVMGPSGCGKTTLLN----CLAGRVKLDSGVIRLNKERLNKRWKRKICYV 96
++G +G GK++LL+ L +++ + K+ + + Y+
Sbjct: 27 LIIGQNGSGKSSLLDAILVGLYWPLRI-----KDIKKDEFTKVGARDTYI 71
>d1z2aa1 c.37.1.8 (A:8-171) Rab23 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 164
Score = 31.2 bits (69), Expect = 0.019
Identities = 4/20 (20%), Positives = 10/20 (50%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
+ V+G GK++++
Sbjct: 5 MVVVGNGAVGKSSMIQRYCK 24
>d1vg8a_ c.37.1.8 (A:) Rab7 {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 184
Score = 31.2 bits (69), Expect = 0.019
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 50 LAVMGPSGCGKTTLLNCLAGR 70
+ ++G SG GKT+L+N +
Sbjct: 5 VIILGDSGVGKTSLMNQYVNK 25
>d3raba_ c.37.1.8 (A:) Rab3a {Rat (Rattus norvegicus) [TaxId:
10116]}
Length = 169
Score = 31.0 bits (69), Expect = 0.021
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
+ ++G S GKT+ L A
Sbjct: 8 ILIIGNSSVGKTSFLFRYAD 27
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae
[TaxId: 1313]}
Length = 223
Score = 31.1 bits (69), Expect = 0.021
Identities = 10/31 (32%), Positives = 17/31 (54%), Gaps = 3/31 (9%)
Query: 51 AVMGPSGCGKTTLLNCLAGRVK---LDSGVI 78
A+ GP+ GK+T+ +A LD+G +
Sbjct: 7 AIDGPASSGKSTVAKIIAKDFGFTYLDTGAM 37
>d1r8sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF1 [TaxId: 9606]}
Length = 160
Score = 30.8 bits (68), Expect = 0.021
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
+ ++G GKTT+L L
Sbjct: 3 ILMVGLDAAGKTTILYKLKL 22
>d1tmka_ c.37.1.1 (A:) Thymidylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 214
Score = 31.0 bits (69), Expect = 0.022
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 47 GELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIR 79
G+L+ + G GKTT N L +++ + +++
Sbjct: 3 GKLILIEGLDRTGKTTQCNILYKKLQPNCKLLK 35
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34
{Garden pea (Pisum sativum) [TaxId: 3888]}
Length = 257
Score = 30.9 bits (69), Expect = 0.029
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 50 LAVMGPSGCGKTTLLNCLAGR 70
+ VMG G GK++ +N + G
Sbjct: 35 ILVMGKGGVGKSSTVNSIIGE 55
>d1xtqa1 c.37.1.8 (A:3-169) GTP-binding protein RheB {Human (Homo
sapiens) [TaxId: 9606]}
Length = 167
Score = 30.5 bits (67), Expect = 0.029
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
+A++G GK++L
Sbjct: 7 IAILGYRSVGKSSLTIQFVE 26
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta,
toxin zeta subunit {Streptococcus pyogenes [TaxId:
1314]}
Length = 273
Score = 30.7 bits (68), Expect = 0.030
Identities = 11/78 (14%), Positives = 27/78 (34%), Gaps = 2/78 (2%)
Query: 44 VKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICYVLQQDIFF 103
V+ + G G GKT+L + + + VI ++ + ++ V +
Sbjct: 29 VESPTAFLLGGQPGSGKTSLRSAIFE--ETQGNVIVIDNDTFKQQHPNFDELVKLYEKDV 86
Query: 104 PELTLRQTLEVSIADEDE 121
+ + ++ A
Sbjct: 87 VKHVTPYSNRMTEAIISR 104
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 30.5 bits (67), Expect = 0.030
Identities = 10/46 (21%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 50 LAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICY 95
+ ++GP G GK+T+ LA + L+ ++E +
Sbjct: 5 IFLVGPMGAGKSTIGRQLAQQ--LNMEFYDSDQEIEKRTGADVGWV 48
>d1zj6a1 c.37.1.8 (A:2-178) ADP-ribosylation factor {Human (Homo
sapiens), ARL5A [TaxId: 9606]}
Length = 177
Score = 30.4 bits (67), Expect = 0.031
Identities = 6/46 (13%), Positives = 15/46 (32%)
Query: 50 LAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICY 95
+ ++G GKTT+L + + + + +
Sbjct: 18 VIIVGLDNAGKTTILYQFSMNEVVHTSPTIGSNVEEIVINNTRFLM 63
>d2bmea1 c.37.1.8 (A:6-179) Rab4a {Human (Homo sapiens) [TaxId:
9606]}
Length = 174
Score = 30.7 bits (68), Expect = 0.031
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
V+G +G GK+ LL+
Sbjct: 8 FLVIGNAGTGKSCLLHQFIE 27
>d1lnza2 c.37.1.8 (A:158-342) Obg GTP-binding protein middle
domain {Bacillus subtilis [TaxId: 1423]}
Length = 185
Score = 30.3 bits (67), Expect = 0.034
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 51 AVMGPSGCGKTTLLNCLAGR 70
++G GK+TLL+ ++
Sbjct: 5 GLVGFPSVGKSTLLSVVSSA 24
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 30.5 bits (67), Expect = 0.035
Identities = 5/26 (19%), Positives = 8/26 (30%)
Query: 45 KPGELLAVMGPSGCGKTTLLNCLAGR 70
G + + G GK + L
Sbjct: 4 TQGFTIFLTGYMNSGKDAIARALQVT 29
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 30.4 bits (67), Expect = 0.035
Identities = 15/74 (20%), Positives = 25/74 (33%), Gaps = 3/74 (4%)
Query: 47 GELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICYVLQQDIFFPEL 106
G + + G SG GKTT+ L + ++ + L E
Sbjct: 19 GCTVWLTGLSGAGKTTVSMALEEYLVCH---GIPCYTLDGDNIRQGLNKNLGFSPEDREE 75
Query: 107 TLRQTLEVSIADED 120
+R+ EV+ D
Sbjct: 76 NVRRIAEVAKLFAD 89
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 30.4 bits (67), Expect = 0.037
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Query: 51 AVMGPSGCGKTTLLNCLA---GRVKLDSGVI 78
+ GPSG GK TL +A LDSG I
Sbjct: 7 TIDGPSGAGKGTLCKAMAEALQWHLLDSGAI 37
>d2g6ba1 c.37.1.8 (A:58-227) Rab26 {Human (Homo sapiens) [TaxId:
9606]}
Length = 170
Score = 30.2 bits (67), Expect = 0.037
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 50 LAVMGPSGCGKTTLLNCLA 68
+ ++G SG GKT LL
Sbjct: 9 VMLVGDSGVGKTCLLVRFK 27
>d2ew1a1 c.37.1.8 (A:4-174) Rab30 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 30.2 bits (67), Expect = 0.038
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
+ ++G +G GKT L+
Sbjct: 8 IVLIGNAGVGKTCLVRRFTQ 27
>d2f7sa1 c.37.1.8 (A:5-190) Rab27b {Human (Homo sapiens) [TaxId:
9606]}
Length = 186
Score = 30.2 bits (67), Expect = 0.040
Identities = 9/20 (45%), Positives = 10/20 (50%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
L +G SG GKTT L
Sbjct: 8 LLALGDSGVGKTTFLYRYTD 27
>d2f9la1 c.37.1.8 (A:8-182) Rab11b {Human (Homo sapiens) [TaxId:
9606]}
Length = 175
Score = 30.2 bits (67), Expect = 0.045
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
+ ++G SG GK+ LL+
Sbjct: 7 VVLIGDSGVGKSNLLSRFTR 26
>d1ctqa_ c.37.1.8 (A:) cH-p21 Ras protein {Human (Homo sapiens)
[TaxId: 9606]}
Length = 166
Score = 30.0 bits (66), Expect = 0.045
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
L V+G G GK+ L L
Sbjct: 6 LVVVGAGGVGKSALTIQLIQ 25
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 29.9 bits (66), Expect = 0.045
Identities = 6/24 (25%), Positives = 10/24 (41%)
Query: 49 LLAVMGPSGCGKTTLLNCLAGRVK 72
++ V G G G TT ++
Sbjct: 3 VVVVTGVPGVGSTTSSQLAMDNLR 26
>d1x3sa1 c.37.1.8 (A:2-178) Rab18 {Human (Homo sapiens) [TaxId:
9606]}
Length = 177
Score = 30.2 bits (67), Expect = 0.045
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
+ ++G SG GK++LL
Sbjct: 10 ILIIGESGVGKSSLLLRFTD 29
>d1udxa2 c.37.1.8 (A:157-336) Obg GTP-binding protein middle
domain {Thermus thermophilus [TaxId: 274]}
Length = 180
Score = 30.0 bits (66), Expect = 0.047
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 51 AVMGPSGCGKTTLLNCLAGR 70
++G GK++LL +
Sbjct: 5 GLVGYPNAGKSSLLAAMTRA 24
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC
{Synechococcus sp. strain PCC 7942 (Anacystis nidulans
R2) [TaxId: 1140]}
Length = 242
Score = 30.0 bits (66), Expect = 0.048
Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 6/52 (11%)
Query: 17 HRPLELVFSGLSVTLDKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLA 68
H+ + + + + D I G + G V G SG GKT
Sbjct: 2 HQAIAKMRTMIE-GFDD--ISH---GGLPIGRSTLVSGTSGTGKTLFSIQFL 47
>d1f6ba_ c.37.1.8 (A:) SAR1 {Chinese hamster (Cricetulus griseus)
[TaxId: 10029]}
Length = 186
Score = 30.1 bits (66), Expect = 0.048
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
L +G GKTTLL+ L
Sbjct: 16 LVFLGLDNAGKTTLLHMLKD 35
>d1kmqa_ c.37.1.8 (A:) RhoA {Human (Homo sapiens) [TaxId: 9606]}
Length = 177
Score = 30.0 bits (66), Expect = 0.049
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 50 LAVMGPSGCGKTTLLNCLA 68
L ++G CGKT LL +
Sbjct: 5 LVIVGDGACGKTCLLIVNS 23
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB
{Methylobacterium extorquens [TaxId: 408]}
Length = 323
Score = 30.2 bits (67), Expect = 0.050
Identities = 8/35 (22%), Positives = 15/35 (42%)
Query: 34 RPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLA 68
R ++ V + + G G GK+T ++ L
Sbjct: 38 RDLIDAVLPQTGRAIRVGITGVPGVGKSTTIDALG 72
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 29.9 bits (66), Expect = 0.050
Identities = 8/58 (13%), Positives = 15/58 (25%), Gaps = 16/58 (27%)
Query: 49 LLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICYVLQQDIFFPEL 106
L+ ++G GKT + L LN + ++
Sbjct: 4 LIVMVGLPARGKTYISKKLT--------------RYLNFIGVP--TREFNVGQYRRDM 45
>d1z08a1 c.37.1.8 (A:17-183) Rab21 {Human (Homo sapiens) [TaxId:
9606]}
Length = 167
Score = 29.9 bits (66), Expect = 0.052
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
+ ++G GKT+L+
Sbjct: 6 VVLLGEGCVGKTSLVLRYCE 25
>d1z0fa1 c.37.1.8 (A:8-173) Rab14 {Human (Homo sapiens) [TaxId:
9606]}
Length = 166
Score = 29.8 bits (66), Expect = 0.052
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 50 LAVMGPSGCGKTTLLNCLA 68
++G G GK+ LL+
Sbjct: 7 YIIIGDMGVGKSCLLHQFT 25
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase
{Escherichia coli [TaxId: 562]}
Length = 179
Score = 29.9 bits (66), Expect = 0.054
Identities = 6/47 (12%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Query: 50 LAVMGPSGCGKTTLLNCLA---GRVKLDSGVIRLNKERLNKRWKRKI 93
+ ++G GK T + G ++ +G + + ++
Sbjct: 3 IILLGAPVAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQA 49
>d2cdna1 c.37.1.1 (A:1-181) Adenylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 181
Score = 29.9 bits (66), Expect = 0.055
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 50 LAVMGPSGCGKTTLLNCLA---GRVKLDSG-VIRLNKERLNKRWKRKICYVLQQDIFFPE 105
+ ++GP G GK T LA G ++ +G + R N E K Y+ D+ +
Sbjct: 3 VLLLGPPGAGKGTQAVKLAEKLGIPQISTGELFRRNIEEGTKLGVEAKRYLDAGDLVPSD 62
Query: 106 LTLR 109
LT
Sbjct: 63 LTNE 66
>d2erxa1 c.37.1.8 (A:6-176) di-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 30.0 bits (66), Expect = 0.056
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
+AV G G GK++L+
Sbjct: 5 VAVFGAGGVGKSSLVLRFVK 24
>d1z06a1 c.37.1.8 (A:32-196) Rab-33b {Mouse (Mus musculus) [TaxId:
10090]}
Length = 165
Score = 29.6 bits (65), Expect = 0.056
Identities = 7/20 (35%), Positives = 9/20 (45%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
+ V+G S GKT L
Sbjct: 5 IIVIGDSNVGKTCLTYRFCA 24
>d1z0ja1 c.37.1.8 (A:2-168) Rab-22a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 167
Score = 29.6 bits (65), Expect = 0.056
Identities = 4/19 (21%), Positives = 12/19 (63%)
Query: 50 LAVMGPSGCGKTTLLNCLA 68
+ ++G +G GK++++
Sbjct: 7 VCLLGDTGVGKSSIMWRFV 25
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK
{Escherichia coli [TaxId: 562]}
Length = 327
Score = 29.8 bits (66), Expect = 0.057
Identities = 9/37 (24%), Positives = 12/37 (32%)
Query: 34 RPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGR 70
+L + L V G G GK+T L
Sbjct: 41 TQLLDAIMPYCGNTLRLGVTGTPGAGKSTFLEAFGML 77
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 29.6 bits (65), Expect = 0.057
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 50 LAVMGPSGCGKTTLLNCLA 68
L ++G G GKTT +
Sbjct: 6 LVLVGDGGTGKTTFVKRHL 24
>d2atva1 c.37.1.8 (A:5-172) Ras-like estrogen-regulated growth
inhibitor, RERG {Human (Homo sapiens) [TaxId: 9606]}
Length = 168
Score = 29.6 bits (65), Expect = 0.057
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 50 LAVMGPSGCGKTTLLNCLA 68
LA+ G +G GK+ L+
Sbjct: 5 LAIFGRAGVGKSALVVRFL 23
>d2atxa1 c.37.1.8 (A:9-193) RhoQ {Human (Homo sapiens) [TaxId:
9606]}
Length = 185
Score = 30.0 bits (66), Expect = 0.058
Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 3/27 (11%)
Query: 45 KPGELL---AVMGPSGCGKTTLLNCLA 68
PG L+ V+G GKT LL A
Sbjct: 4 GPGALMLKCVVVGDGAVGKTCLLMSYA 30
>d2bcgy1 c.37.1.8 (Y:3-196) GTPase Ytp1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 194
Score = 29.8 bits (66), Expect = 0.058
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
L ++G SG GK+ LL +
Sbjct: 9 LLLIGNSGVGKSCLLLRFSD 28
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 29.5 bits (65), Expect = 0.059
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 50 LAVMGPSGCGKTTLLNCLAGRVKLD 74
+ + G G GKTTL LA + L
Sbjct: 7 ILLTGTPGVGKTTLGKELASKSGLK 31
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Length = 309
Score = 29.8 bits (66), Expect = 0.059
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 33 KRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGR 70
+R L++ + + ++GP+G GKT + LA
Sbjct: 35 RRMQLQEPLRHEVTPKNILMIGPTGVGKTEIARRLAKL 72
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3'
phosphatase, C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 172
Score = 29.8 bits (66), Expect = 0.060
Identities = 9/41 (21%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Query: 48 ELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKR 88
E++ +G G GK+T + +G + +N++ L
Sbjct: 15 EVVVAVGFPGAGKSTFIQEHLVS----AGYVHVNRDTLGSW 51
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 253
Score = 29.7 bits (65), Expect = 0.060
Identities = 12/58 (20%), Positives = 19/58 (32%), Gaps = 1/58 (1%)
Query: 42 GVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICYVLQQ 99
G + + GP G GKTT + +A + D + R + L
Sbjct: 48 GSGVFRAAM-LYGPPGIGKTTAAHLVAQELGYDILEQNASDVRSKTLLNAGVKNALDN 104
>d1g16a_ c.37.1.8 (A:) Rab-related protein Sec4 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 166
Score = 29.7 bits (66), Expect = 0.061
Identities = 7/20 (35%), Positives = 11/20 (55%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
+ ++G SG GK+ LL
Sbjct: 5 ILLIGDSGVGKSCLLVRFVE 24
>d1yzqa1 c.37.1.8 (A:14-177) Rab6 {Human (Homo sapiens) [TaxId:
9606]}
Length = 164
Score = 29.5 bits (65), Expect = 0.062
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
L +G GKT+L+
Sbjct: 3 LVFLGEQSVGKTSLITRFMY 22
>d1ek0a_ c.37.1.8 (A:) Ypt51 {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 170
Score = 29.6 bits (65), Expect = 0.062
Identities = 4/20 (20%), Positives = 11/20 (55%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
L ++G + GK++++
Sbjct: 6 LVLLGEAAVGKSSIVLRFVS 25
>d1r2qa_ c.37.1.8 (A:) Rab5a {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 29.6 bits (65), Expect = 0.062
Identities = 6/19 (31%), Positives = 11/19 (57%)
Query: 50 LAVMGPSGCGKTTLLNCLA 68
L ++G S GK++L+
Sbjct: 9 LVLLGESAVGKSSLVLRFV 27
>d2fu5c1 c.37.1.8 (C:3-175) Rab8a {Mouse (Mus musculus) [TaxId:
10090]}
Length = 173
Score = 29.7 bits (66), Expect = 0.063
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
L ++G SG GKT +L +
Sbjct: 9 LLLIGDSGVGKTCVLFRFSE 28
>d1nn5a_ c.37.1.1 (A:) Thymidylate kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 209
Score = 29.5 bits (65), Expect = 0.063
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 45 KPGELLAVMGPSGCGKTTLLNCLA 68
+ G L+ + G GK+T L
Sbjct: 1 RRGALIVLEGVDRAGKSTQSRKLV 24
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15
homolog {Human (Homo sapiens) [TaxId: 9606]}
Length = 258
Score = 29.7 bits (65), Expect = 0.064
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 41 SGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKL 73
G ++ + G GKT L + L +L
Sbjct: 31 GGGIESMAITEAFGEFRTGKTQLSHTLCVTAQL 63
>d1gsia_ c.37.1.1 (A:) Thymidylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 208
Score = 29.6 bits (65), Expect = 0.065
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 49 LLAVMGPSGCGKTTLLNCLAGRVK 72
L+A+ G G GK TL+ L+G +
Sbjct: 2 LIAIEGVDGAGKRTLVEKLSGAFR 25
>d1y63a_ c.37.1.1 (A:) Probable kinase LmjF30.1890 {Leishmania
major [TaxId: 5664]}
Length = 174
Score = 29.6 bits (65), Expect = 0.065
Identities = 6/21 (28%), Positives = 11/21 (52%)
Query: 50 LAVMGPSGCGKTTLLNCLAGR 70
+ + G G GKT++ +A
Sbjct: 8 ILITGTPGTGKTSMAEMIAAE 28
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 29.6 bits (65), Expect = 0.067
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 49 LLAVMGPSGCGKTTLLNCLAGRVK 72
+ V G G GK+T+L + +
Sbjct: 3 IGIVTGIPGVGKSTVLAKVKEILD 26
>d1zaka1 c.37.1.1 (A:3-127,A:159-222) Adenylate kinase {Maize (Zea
mays) [TaxId: 4577]}
Length = 189
Score = 29.5 bits (65), Expect = 0.069
Identities = 6/58 (10%), Positives = 18/58 (31%), Gaps = 3/58 (5%)
Query: 50 LAVMGPSGCGKTTLLNCLA---GRVKLDSGVIRLNKERLNKRWKRKICYVLQQDIFFP 104
+ + G GK T + + +G + + ++ +++ P
Sbjct: 6 VMISGAPASGKGTQCELIKTKYQLAHISAGDLLRAEIAAGSENGKRAKEFMEKGQLVP 63
>d2fn4a1 c.37.1.8 (A:24-196) r-Ras {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 29.6 bits (65), Expect = 0.070
Identities = 7/21 (33%), Positives = 9/21 (42%)
Query: 50 LAVMGPSGCGKTTLLNCLAGR 70
L V+G G GK+ L
Sbjct: 9 LVVVGGGGVGKSALTIQFIQS 29
>d2vp4a1 c.37.1.1 (A:12-208) Deoxyribonucleoside kinase {Fruit fly
(Drosophila melanogaster) [TaxId: 7227]}
Length = 197
Score = 29.6 bits (65), Expect = 0.074
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 49 LLAVMGPSGCGKTTLLNCLA 68
+ + G G GKTT LN
Sbjct: 11 TVLIEGNIGSGKTTYLNHFE 30
>d1x1ra1 c.37.1.8 (A:10-178) Ras-related protein M-Ras (XRas)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 169
Score = 29.2 bits (64), Expect = 0.079
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 50 LAVMGPSGCGKTTLLNCLA 68
L V+G G GK+ L
Sbjct: 7 LVVVGDGGVGKSALTIQFF 25
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 29.2 bits (64), Expect = 0.079
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 50 LAVMGPSGCGKTTLLNCLAGRVKLD 74
++G G GK+T+ LA + +
Sbjct: 4 AVLVGLPGSGKSTIGRRLAKALGVG 28
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo
sapiens), ARF6 [TaxId: 9606]}
Length = 173
Score = 29.2 bits (64), Expect = 0.080
Identities = 7/19 (36%), Positives = 11/19 (57%)
Query: 50 LAVMGPSGCGKTTLLNCLA 68
+ ++G GKTT+L L
Sbjct: 15 ILMLGLDAAGKTTILYKLK 33
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 225
Score = 29.3 bits (65), Expect = 0.086
Identities = 12/57 (21%), Positives = 22/57 (38%)
Query: 47 GELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICYVLQQDIFF 103
G++ + G SG GK++LLN + +KL + +R +
Sbjct: 95 GKISTMAGLSGVGKSSLLNAINPGLKLRVSEVSEKLQRGRHTTTTAQLLKFDFGGYV 151
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH
{Thermus thermophilus [TaxId: 274]}
Length = 247
Score = 29.4 bits (66), Expect = 0.086
Identities = 16/61 (26%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Query: 29 VTLDKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKR 88
V K P G P +L ++GP G GKT L +AG ++ I + +
Sbjct: 25 VEFLKNPSRFHEMGARIPKGVL-LVGPPGVGKTHLARAVAGEARVP--FITASGSDFVEM 81
Query: 89 W 89
+
Sbjct: 82 F 82
>d1m7ba_ c.37.1.8 (A:) RhoE (RND3) {Mouse (Mus musculus) [TaxId:
10090]}
Length = 179
Score = 29.2 bits (64), Expect = 0.088
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 50 LAVMGPSGCGKTTLLNCLA 68
+ V+G S CGKT LL+ A
Sbjct: 5 IVVVGDSQCGKTALLHVFA 23
>d2erya1 c.37.1.8 (A:10-180) r-Ras2 {Human (Homo sapiens) [TaxId:
9606]}
Length = 171
Score = 29.2 bits (64), Expect = 0.088
Identities = 7/21 (33%), Positives = 9/21 (42%)
Query: 50 LAVMGPSGCGKTTLLNCLAGR 70
L V+G G GK+ L
Sbjct: 8 LVVVGGGGVGKSALTIQFIQS 28
>d1wmsa_ c.37.1.8 (A:) Rab9a {Human (Homo sapiens) [TaxId: 9606]}
Length = 174
Score = 29.2 bits (64), Expect = 0.090
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 50 LAVMGPSGCGKTTLLNCLA 68
+ ++G G GK++L+N
Sbjct: 9 VILLGDGGVGKSSLMNRYV 27
>d1kaoa_ c.37.1.8 (A:) Rap2a {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 29.1 bits (64), Expect = 0.093
Identities = 6/20 (30%), Positives = 9/20 (45%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
+ V+G G GK+ L
Sbjct: 6 VVVLGSGGVGKSALTVQFVT 25
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia
chrysanthemi [TaxId: 556]}
Length = 170
Score = 29.2 bits (64), Expect = 0.100
Identities = 8/25 (32%), Positives = 14/25 (56%)
Query: 50 LAVMGPSGCGKTTLLNCLAGRVKLD 74
+ ++G GCG TT+ LA + +
Sbjct: 5 IFMVGARGCGMTTVGRELARALGYE 29
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 29.1 bits (64), Expect = 0.100
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 50 LAVMGPSGCGKTTLLNCLAGRVKLDSGV 77
+AV+G GK+++L GR L G
Sbjct: 29 IAVVGGQSAGKSSVLENFVGRDFLPRGS 56
>d2bmja1 c.37.1.8 (A:66-240) Centaurin gamma 1, G domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 175
Score = 29.2 bits (64), Expect = 0.10
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 50 LAVMGPSGCGKTTLLNCLA 68
L V+G + GK++L++
Sbjct: 8 LGVLGDARSGKSSLIHRFL 26
>d2a5ja1 c.37.1.8 (A:9-181) Rab2b {Human (Homo sapiens) [TaxId:
9606]}
Length = 173
Score = 29.1 bits (64), Expect = 0.10
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
++G +G GK+ LL
Sbjct: 6 YIIIGDTGVGKSCLLLQFTD 25
>d1j3ba1 c.91.1.1 (A:212-529) Phosphoenolpyruvate (PEP)
carboxykinase (ATP-oxaloacetate carboxy-lyase) {Thermus
thermophilus [TaxId: 274]}
Length = 318
Score = 29.2 bits (65), Expect = 0.10
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 43 VVKPGELLAVMGPSGCGKTTL 63
V K G++ G SG GKTTL
Sbjct: 10 VGKEGDVAVFFGLSGTGKTTL 30
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase,
BchI {Rhodobacter capsulatus [TaxId: 1061]}
Length = 333
Score = 29.1 bits (64), Expect = 0.11
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
+ V G G GK+T + LA
Sbjct: 31 VLVFGDRGTGKSTAVRALAA 50
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter
jejuni [TaxId: 197]}
Length = 161
Score = 28.7 bits (63), Expect = 0.11
Identities = 11/46 (23%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Query: 50 LAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICY 95
+ +G G GK+TL LA LD + + K ++
Sbjct: 3 IVFIGFMGSGKSTLARALAK--DLDLVFLDSDFLIEQKFNQKVSEI 46
>d2olra1 c.91.1.1 (A:228-540) Phosphoenolpyruvate (PEP)
carboxykinase (ATP-oxaloacetate carboxy-lyase)
{Escherichia coli [TaxId: 562]}
Length = 313
Score = 29.2 bits (65), Expect = 0.11
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 43 VVKPGELLAVMGPSGCGKTTL 63
V + G++ G SG GKTTL
Sbjct: 10 VGEKGDVAVFFGLSGTGKTTL 30
>d1a5ta2 c.37.1.20 (A:1-207) delta prime subunit of DNA polymerase
III, N-domain {Escherichia coli [TaxId: 562]}
Length = 207
Score = 28.9 bits (63), Expect = 0.11
Identities = 4/15 (26%), Positives = 6/15 (40%)
Query: 54 GPSGCGKTTLLNCLA 68
G G L+ L+
Sbjct: 31 ALPGMGDDALIYALS 45
>d1p6xa_ c.37.1.1 (A:) Thymidine kinase {Equine herpesvirus type 4
[TaxId: 10331]}
Length = 333
Score = 29.2 bits (65), Expect = 0.11
Identities = 7/31 (22%), Positives = 12/31 (38%)
Query: 50 LAVMGPSGCGKTTLLNCLAGRVKLDSGVIRL 80
+ + G G GK+T +A S +
Sbjct: 9 IYLDGVYGIGKSTTGRVMASAASGGSPTLYF 39
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH
{Escherichia coli [TaxId: 562]}
Length = 256
Score = 29.0 bits (65), Expect = 0.12
Identities = 16/61 (26%), Positives = 24/61 (39%), Gaps = 3/61 (4%)
Query: 29 VTLDKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKR 88
V + P G P +L V GP G GKT L +AG K+ ++ +
Sbjct: 28 VEYLREPSRFQKLGGKIPKGVLMV-GPPGTGKTLLAKAIAGEAKVP--FFTISGSDFVEM 84
Query: 89 W 89
+
Sbjct: 85 F 85
>d1u8za_ c.37.1.8 (A:) Ras-related protein RalA {Cotton-top
tamarin (Saguinus oedipus) [TaxId: 9490]}
Length = 168
Score = 28.7 bits (63), Expect = 0.12
Identities = 5/19 (26%), Positives = 9/19 (47%)
Query: 50 LAVMGPSGCGKTTLLNCLA 68
+ ++G G GK+ L
Sbjct: 7 VIMVGSGGVGKSALTLQFM 25
>d1a7ja_ c.37.1.6 (A:) Phosphoribulokinase {Rhodobacter
sphaeroides [TaxId: 1063]}
Length = 288
Score = 29.1 bits (65), Expect = 0.12
Identities = 6/20 (30%), Positives = 12/20 (60%)
Query: 49 LLAVMGPSGCGKTTLLNCLA 68
+++V G SG G +T+ +
Sbjct: 6 IISVTGSSGAGTSTVKHTFD 25
>d1ii2a1 c.91.1.1 (A:201-523) Phosphoenolpyruvate (PEP)
carboxykinase (ATP-oxaloacetate carboxy-lyase)
{Trypanosoma cruzi [TaxId: 5693]}
Length = 323
Score = 29.2 bits (65), Expect = 0.12
Identities = 11/21 (52%), Positives = 13/21 (61%)
Query: 43 VVKPGELLAVMGPSGCGKTTL 63
V K G++ G SG GKTTL
Sbjct: 10 VGKQGDVTVFFGLSGTGKTTL 30
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast
(Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Length = 182
Score = 28.8 bits (63), Expect = 0.13
Identities = 8/18 (44%), Positives = 12/18 (66%)
Query: 50 LAVMGPSGCGKTTLLNCL 67
+ ++G G GKTT+L L
Sbjct: 20 ILILGLDGAGKTTILYRL 37
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal
domain {Aeropyrum pernix [TaxId: 56636]}
Length = 287
Score = 29.0 bits (63), Expect = 0.13
Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Query: 33 KRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVK 72
+L +G+ + +G G GKTTL RV
Sbjct: 33 LNRLLSG-AGLSDVNMIYGSIGRVGIGKTTLAKFTVKRVS 71
>d1mh1a_ c.37.1.8 (A:) Rac {Human (Homo sapiens) [TaxId: 9606]}
Length = 183
Score = 28.8 bits (63), Expect = 0.13
Identities = 8/49 (16%), Positives = 11/49 (22%)
Query: 50 LAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICYVLQ 98
V+G GKT LL + + L
Sbjct: 8 CVVVGDGAVGKTCLLISYTTNAFPGEYIPTVFDNYSANVMVDGKPVNLG 56
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId:
161736]}
Length = 321
Score = 28.8 bits (64), Expect = 0.14
Identities = 9/50 (18%), Positives = 18/50 (36%)
Query: 32 DKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLN 81
P++ + G ++ V G GKT L++ L + +
Sbjct: 108 GCSPVVAEFGGHRYASGMVIVTGKGNSGKTPLVHALGEALGGKDKYATVR 157
>d1c1ya_ c.37.1.8 (A:) Rap1A {Human (Homo sapiens) [TaxId: 9606]}
Length = 167
Score = 28.4 bits (62), Expect = 0.14
Identities = 7/19 (36%), Positives = 9/19 (47%)
Query: 50 LAVMGPSGCGKTTLLNCLA 68
L V+G G GK+ L
Sbjct: 6 LVVLGSGGVGKSALTVQFV 24
>d1jwyb_ c.37.1.8 (B:) Dynamin G domain {Dictyostelium discoideum
[TaxId: 44689]}
Length = 306
Score = 28.6 bits (63), Expect = 0.15
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 50 LAVMGPSGCGKTTLLNCLAGRVKLDSGVI 78
+ V+G GK+++L + GR L G
Sbjct: 27 IVVVGSQSSGKSSVLENIVGRDFLPRGSG 55
>d2ngra_ c.37.1.8 (A:) CDC42 {Human (Homo sapiens) [TaxId: 9606]}
Length = 191
Score = 28.4 bits (62), Expect = 0.16
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 50 LAVMGPSGCGKTTLLNCLA 68
V+G GKT LL
Sbjct: 6 CVVVGDGAVGKTCLLISYT 24
>d1knxa2 c.91.1.2 (A:133-309) HPr kinase HprK C-terminal domain
{Mycoplasma pneumoniae [TaxId: 2104]}
Length = 177
Score = 28.4 bits (63), Expect = 0.16
Identities = 12/49 (24%), Positives = 18/49 (36%), Gaps = 4/49 (8%)
Query: 41 SGVVKPGELLAVMGPSGCGKTTLLNCLAGR----VKLDSGVIRLNKERL 85
+ G + + G SG GK+ L + V D+ I RL
Sbjct: 9 VLLEVFGVGVLLTGRSGIGKSECALDLINKNHLFVGDDAIEIYRLGNRL 57
>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus
musculus), class II [TaxId: 10090]}
Length = 174
Score = 28.4 bits (62), Expect = 0.18
Identities = 12/47 (25%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Query: 44 VKPGELLAVMGPSGCG-KTTLLNCLAGRVKLDSGVIRLNKERLNKRW 89
V PG AV G G + +AG ++ + I K K
Sbjct: 26 VTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKAL 72
>d1p5zb_ c.37.1.1 (B:) Deoxycytidine kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 241
Score = 28.4 bits (62), Expect = 0.18
Identities = 6/22 (27%), Positives = 12/22 (54%)
Query: 47 GELLAVMGPSGCGKTTLLNCLA 68
+ +++ G GK+T +N L
Sbjct: 2 IKKISIEGNIAAGKSTFVNILK 23
>d1wb1a4 c.37.1.8 (A:1-179) Elongation factor SelB, N-terminal
domain {Methanococcus maripaludis [TaxId: 39152]}
Length = 179
Score = 28.5 bits (62), Expect = 0.18
Identities = 8/20 (40%), Positives = 9/20 (45%)
Query: 50 LAVMGPSGCGKTTLLNCLAG 69
L + G GKTTL L
Sbjct: 8 LGIFGHIDHGKTTLSKVLTE 27
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 427
Score = 28.5 bits (62), Expect = 0.20
Identities = 5/17 (29%), Positives = 14/17 (82%)
Query: 51 AVMGPSGCGKTTLLNCL 67
+++GP+G GK+ +++ +
Sbjct: 29 SIIGPNGSGKSNMMDAI 45
>d1kkma_ c.91.1.2 (A:) HPr kinase HprK C-terminal domain
{Lactobacillus casei [TaxId: 1582]}
Length = 176
Score = 27.9 bits (62), Expect = 0.21
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 41 SGVVKPGELLAVMGPSGCGKTTLLNCLAGR 70
V G + + G SG GK+ L R
Sbjct: 8 VLVDIYGLGVLITGDSGVGKSETALELVQR 37
>d4tmka_ c.37.1.1 (A:) Thymidylate kinase {Escherichia coli
[TaxId: 562]}
Length = 210
Score = 28.4 bits (62), Expect = 0.21
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 47 GELLAVMGPSGCGKTTLLNCLAGRVK 72
+ + + G G GKTT N + ++
Sbjct: 2 SKYIVIEGLEGAGKTTARNVVVETLE 27
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 286
Score = 28.2 bits (62), Expect = 0.21
Identities = 10/73 (13%), Positives = 19/73 (26%), Gaps = 15/73 (20%)
Query: 49 LLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRW-KRKICYVLQQDIFFPELT 107
+ GP G GK+ + L +++ K D F+
Sbjct: 29 FIFFSGPQGSGKSFTSIQI--------------YNHLMEKYGGEKSIGYASIDDFYLTHE 74
Query: 108 LRQTLEVSIADED 120
+ L +
Sbjct: 75 DQLKLNEQFKNNK 87
>d1svsa1 c.37.1.8 (A:32-60,A:182-347) Transducin (alpha subunit)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 195
Score = 28.0 bits (61), Expect = 0.22
Identities = 5/18 (27%), Positives = 11/18 (61%)
Query: 50 LAVMGPSGCGKTTLLNCL 67
L ++G GK+T++ +
Sbjct: 5 LLLLGAGESGKSTIVKQM 22
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 28.0 bits (61), Expect = 0.23
Identities = 9/47 (19%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Query: 50 LAVMGPSGCGKTTLLNCLA---GRVKLDSGVIRLNKERLNKRWKRKI 93
+ ++GP G GK T L L +G + ++ + +
Sbjct: 5 MVLIGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGTQLGLEA 51
>d1e69a_ c.37.1.12 (A:) Smc head domain {Thermotoga maritima
[TaxId: 2336]}
Length = 308
Score = 28.1 bits (61), Expect = 0.24
Identities = 6/18 (33%), Positives = 14/18 (77%)
Query: 51 AVMGPSGCGKTTLLNCLA 68
A++GP+G GK+ +++ +
Sbjct: 28 AIVGPNGSGKSNIIDAIK 45
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein
TrwB {Escherichia coli [TaxId: 562]}
Length = 433
Score = 28.0 bits (61), Expect = 0.26
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 50 LAVMGPSGCGKTTLLNCLA 68
L V G +G GK+ LL LA
Sbjct: 53 LLVNGATGTGKSVLLRELA 71
>d1ko7a2 c.91.1.2 (A:130-298) HPr kinase HprK C-terminal domain
{Staphylococcus xylosus [TaxId: 1288]}
Length = 169
Score = 27.6 bits (61), Expect = 0.26
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 41 SGVVKPGELLAVMGPSGCGKTTLLNCLAGR 70
V G + + G SG GK+ L R
Sbjct: 9 VLVDVYGVGVLITGDSGIGKSETALELIKR 38
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus
influenzae [TaxId: 727]}
Length = 158
Score = 27.7 bits (61), Expect = 0.27
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 45 KPGELLAVMGPSGCGKTTLLNCLA 68
+ ++ + G G GKTTL +
Sbjct: 31 EKAIMVYLNGDLGAGKTTLTRGML 54
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 27.6 bits (60), Expect = 0.28
Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 4/58 (6%)
Query: 50 LAVMGPSGCGKTTLLNCLA---GRVKLDSG-VIRLNKERLNKRWKRKICYVLQQDIFF 103
L +MG G GK T + G + +G + R + + Y+ + D+
Sbjct: 3 LVLMGLPGAGKGTQAEKIVAAYGIPHISTGDMFRAAMKEGTPLGLQAKQYMDRGDLVP 60
>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 196
Score = 27.6 bits (60), Expect = 0.30
Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 50 LAVMGPSGCGKTTLLNCLA---GRVKLDSG-VIRLNKERLNKRWKRKICYVLQQDIFFP 104
+ V+G G GK T L V L +G ++R + R ++ I +++ P
Sbjct: 11 IFVLGGPGAGKGTQCEKLVKDYSFVHLSAGDLLRAEQGRAGSQYGELIKNCIKEGQIVP 69
>d1ls1a2 c.37.1.10 (A:89-295) GTPase domain of the signal sequence
recognition protein Ffh {Thermus aquaticus [TaxId:
271]}
Length = 207
Score = 27.4 bits (60), Expect = 0.34
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 43 VVKPGELLAVMGPSGCGKTTLLNCLAGRVK 72
V+K L ++G G GKTT LA K
Sbjct: 6 VLKDRNLWFLVGLQGSGKTTTAAKLALYYK 35
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor
Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Length = 289
Score = 27.7 bits (61), Expect = 0.37
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 47 GELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKR 88
G+ ++ P GKT LL +A + + L +++R
Sbjct: 43 GQRGLIVAPPKAGKTMLLQNIAQSIAYNHPDCVLMVLLIDER 84
>d2bcjq2 c.37.1.8 (Q:38-66,Q:184-354) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 27.6 bits (60), Expect = 0.38
Identities = 4/16 (25%), Positives = 9/16 (56%)
Query: 52 VMGPSGCGKTTLLNCL 67
++G GK+T + +
Sbjct: 7 LLGTGESGKSTFIKQM 22
>d1g7sa4 c.37.1.8 (A:1-227) Initiation factor IF2/eIF5b,
N-terminal (G) domain {Archaeon Methanobacterium
thermoautotrophicum [TaxId: 145262]}
Length = 227
Score = 27.3 bits (59), Expect = 0.44
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Query: 51 AVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKE 83
+V+G GKTTLL+ + G + R
Sbjct: 9 SVLGHVDHGKTTLLDHIRG----SAVASREAGG 37
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli
[TaxId: 562]}
Length = 308
Score = 27.4 bits (60), Expect = 0.45
Identities = 8/55 (14%), Positives = 20/55 (36%), Gaps = 14/55 (25%)
Query: 49 LLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICYVLQQDIFF 103
++++ G GK+T L + L++ + + ++ D F
Sbjct: 82 IISIAGSVAVGKSTTARVL--------------QALLSRWPEHRRVELITTDGFL 122
>d1yksa1 c.37.1.14 (A:185-324) YFV helicase domain {Yellow fever
virus [TaxId: 11089]}
Length = 140
Score = 27.0 bits (58), Expect = 0.45
Identities = 7/22 (31%), Positives = 10/22 (45%)
Query: 41 SGVVKPGELLAVMGPSGCGKTT 62
S ++K G + G GKT
Sbjct: 1 SHMLKKGMTTVLDFHPGAGKTR 22
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase
domain {Simian virus 40 [TaxId: 10633]}
Length = 362
Score = 27.3 bits (60), Expect = 0.46
Identities = 14/47 (29%), Positives = 17/47 (36%), Gaps = 4/47 (8%)
Query: 36 ILKD-VSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLN 81
LK V + K L GP GKTTL L + +N
Sbjct: 143 FLKCMVYNIPKKRYWL-FKGPIDSGKTTLAAALLELCGGK--ALNVN 186
>d1e2ka_ c.37.1.1 (A:) Thymidine kinase {Herpes simplex virus type
1, different strains [TaxId: 10298]}
Length = 329
Score = 27.3 bits (60), Expect = 0.47
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 49 LLAVMGPSGCGKTTLLNCLA 68
+ + GP G GKTT L
Sbjct: 6 RVYIDGPHGMGKTTTTQLLV 25
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 252
Score = 27.4 bits (59), Expect = 0.47
Identities = 7/15 (46%), Positives = 8/15 (53%)
Query: 54 GPSGCGKTTLLNCLA 68
GP+G GK T L
Sbjct: 40 GPNGTGKKTRCMALL 54
>d2ocpa1 c.37.1.1 (A:37-277) Deoxyguanosine kinase {Human (Homo
sapiens) [TaxId: 9606]}
Length = 241
Score = 27.3 bits (59), Expect = 0.50
Identities = 6/20 (30%), Positives = 10/20 (50%)
Query: 49 LLAVMGPSGCGKTTLLNCLA 68
L++ G GK+T + L
Sbjct: 4 RLSIEGNIAVGKSTFVKLLT 23
>d2dy1a2 c.37.1.8 (A:8-274) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus, EF-G-2 [TaxId: 274]}
Length = 267
Score = 27.2 bits (59), Expect = 0.56
Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 4/33 (12%)
Query: 51 AVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKE 83
A++G +G GKTTL + +G
Sbjct: 6 ALVGHAGSGKTTLT----EALLYKTGAKERRGR 34
>d1n0ua2 c.37.1.8 (A:3-343) Elongation factor 2 (eEF-2), N-terminal
(G) domain {Baker's yeast (Saccharomyces cerevisiae)
[TaxId: 4932]}
Length = 341
Score = 27.0 bits (59), Expect = 0.56
Identities = 12/72 (16%), Positives = 24/72 (33%), Gaps = 3/72 (4%)
Query: 51 AVMGPSGCGKTTLLNCL---AGRVKLDSGVIRLNKERLNKRWKRKICYVLQQDIFFPELT 107
+V+ GK+TL + L AG + + +R I + E++
Sbjct: 21 SVIAHVDHGKSTLTDSLVQRAGIISAAKAGEARFTDTRKDEQERGITIKSTAISLYSEMS 80
Query: 108 LRQTLEVSIADE 119
E+ +
Sbjct: 81 DEDVKEIKQKTD 92
>d1osna_ c.37.1.1 (A:) Thymidine kinase {Varicella-zoster virus
[TaxId: 10335]}
Length = 331
Score = 26.9 bits (59), Expect = 0.57
Identities = 6/18 (33%), Positives = 7/18 (38%)
Query: 51 AVMGPSGCGKTTLLNCLA 68
+ G G GKTT
Sbjct: 9 YLDGAYGIGKTTAAEEFL 26
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1
ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 276
Score = 27.0 bits (60), Expect = 0.58
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 47 GELLAVMGPSGCGKTTLLNCLAGRVKLDSGVI 78
G + + G +G GKT L+ L V G
Sbjct: 68 GGKIGLFGGAGVGKTVLIMELINNVAKAHGGY 99
>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-3 [TaxId: 9913]}
Length = 189
Score = 26.7 bits (58), Expect = 0.59
Identities = 14/62 (22%), Positives = 26/62 (41%), Gaps = 4/62 (6%)
Query: 50 LAVMGPSGCGKTTLLNCLA---GRVKLDSG-VIRLNKERLNKRWKRKICYVLQQDIFFPE 105
A+MG G GK T+ + + L SG ++R N R + ++ Q + +
Sbjct: 9 AAIMGAPGSGKGTVSSRITKHFELKHLSSGDLLRDNMLRGTEIGVLAKTFIDQGKLIPDD 68
Query: 106 LT 107
+
Sbjct: 69 VM 70
>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
9823]}
Length = 194
Score = 26.8 bits (58), Expect = 0.60
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 44 VKPGELLAVMGPSGCGKTTLLNCLAGRVKL 73
+K +++ V+G G GK T + +
Sbjct: 5 LKKSKIIFVVGGPGSGKGTQCEKIVQKYGY 34
>d1nija1 c.37.1.10 (A:2-223) Hypothetical protein YjiA, N-terminal
domain {Escherichia coli [TaxId: 562]}
Length = 222
Score = 26.8 bits (58), Expect = 0.61
Identities = 11/28 (39%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 52 VMGPSGCGKTTLLN-CLAGRVKLDSGVI 78
+ G G GKTTLL L + VI
Sbjct: 8 LTGFLGAGKTTLLRHILNEQHGYKIAVI 35
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus
[TaxId: 2261]}
Length = 329
Score = 26.9 bits (58), Expect = 0.61
Identities = 5/18 (27%), Positives = 12/18 (66%)
Query: 51 AVMGPSGCGKTTLLNCLA 68
A++G +G GK+ + + +
Sbjct: 30 AIVGANGSGKSNIGDAIL 47
>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens)
[TaxId: 9606]}
Length = 194
Score = 26.9 bits (58), Expect = 0.64
Identities = 11/54 (20%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Query: 50 LAVMGPSGCGKTTLLNCLA---GRVKLDSG-VIRLNKERLNKRWKRKICYVLQQ 99
+ V+G G GK T + G L +G ++R ++ + ++ I +++
Sbjct: 4 VFVLGGPGAGKGTQCARIVEKYGYTHLSAGELLRDERKNPDSQYGELIEKYIKE 57
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 26.8 bits (58), Expect = 0.65
Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 3/53 (5%)
Query: 50 LAVMGPSGCGKTTLLNCLA---GRVKLDSGVIRLNKERLNKRWKRKICYVLQQ 99
++GP G GK T LA L +G + +K+ +
Sbjct: 6 AVLLGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVASGSELGKKLKATMDA 58
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 26.8 bits (58), Expect = 0.68
Identities = 5/16 (31%), Positives = 9/16 (56%)
Query: 52 VMGPSGCGKTTLLNCL 67
++G GK+T L +
Sbjct: 7 LLGAGESGKSTFLKQM 22
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 26.8 bits (58), Expect = 0.68
Identities = 6/19 (31%), Positives = 10/19 (52%)
Query: 50 LAVMGPSGCGKTTLLNCLA 68
+ +MG G GK T + +
Sbjct: 3 IVLMGLPGAGKGTQADRIV 21
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit)
{Cow (Bos taurus) [TaxId: 9913]}
Length = 221
Score = 26.6 bits (58), Expect = 0.70
Identities = 4/16 (25%), Positives = 10/16 (62%)
Query: 52 VMGPSGCGKTTLLNCL 67
++G GK+T++ +
Sbjct: 11 LLGAGESGKSTIVKQM 26
>d1r5ba3 c.37.1.8 (A:215-459) Eukaryotic peptide chain release
factor ERF2, G domain {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 245
Score = 26.7 bits (58), Expect = 0.73
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 6/53 (11%)
Query: 36 ILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKR 88
+LKD+ G K + +G GK+TL G + +G++ +R
Sbjct: 15 LLKDMYG--KEHVNIVFIGHVDAGKSTLG----GNILFLTGMVDKRTMEKIER 61
>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
[TaxId: 44689]}
Length = 194
Score = 26.5 bits (57), Expect = 0.75
Identities = 6/17 (35%), Positives = 8/17 (47%)
Query: 52 VMGPSGCGKTTLLNCLA 68
V+G G GK T +
Sbjct: 11 VLGGPGSGKGTQCANIV 27
>d2bmfa2 c.37.1.14 (A:178-482) Dengue virus helicase {Dengue virus
type 2 [TaxId: 11060]}
Length = 305
Score = 26.8 bits (58), Expect = 0.81
Identities = 5/20 (25%), Positives = 8/20 (40%)
Query: 43 VVKPGELLAVMGPSGCGKTT 62
+ + L + G GKT
Sbjct: 5 IFRKKRLTIMDLHPGAGKTK 24
>d1jnya3 c.37.1.8 (A:4-227) Elongation factor eEF-1alpha,
N-terminal (G) domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 224
Score = 26.3 bits (57), Expect = 0.82
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
Query: 50 LAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICY 95
L V+G GK+TL+ GR+ +D G I + + +K+
Sbjct: 6 LIVIGHVDHGKSTLV----GRLLMDRGFIDEKTVKEAEEAAKKLGK 47
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB
{Thermus thermophilus [TaxId: 274]}
Length = 239
Score = 26.5 bits (57), Expect = 0.82
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 53 MGPSGCGKTTLLNC 66
GP G GKTTL +
Sbjct: 41 FGPPGLGKTTLAHV 54
>d1m7ga_ c.37.1.4 (A:) Adenosine-5'phosphosulfate kinase (APS
kinase) {Fungus (Penicillium chrysogenum) [TaxId:
5076]}
Length = 208
Score = 26.3 bits (57), Expect = 0.84
Identities = 12/47 (25%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Query: 22 LVFSGLSVTLDKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLA 68
+ F ++T +R L++ G+ + + G S GK+TL L
Sbjct: 4 ITFHASALTRSERTELRNQRGLT-----IWLTGLSASGKSTLAVELE 45
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal
domain {Bacillus subtilis [TaxId: 1423]}
Length = 231
Score = 26.6 bits (58), Expect = 0.85
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 51 AVMGPSGCGKTTLLNCLAGRVKLDSGVIR 79
G SG GK++LLN ++ + L + I
Sbjct: 101 VFAGQSGVGKSSLLNAISPELGLRTNEIS 129
>d2bv3a2 c.37.1.8 (A:7-282) Elongation factor G (EF-G), N-terminal
(G) domain {Thermus thermophilus [TaxId: 274]}
Length = 276
Score = 26.2 bits (57), Expect = 0.93
Identities = 7/29 (24%), Positives = 10/29 (34%), Gaps = 4/29 (13%)
Query: 51 AVMGPSGCGKTTLLNCLAGRVKLDSGVIR 79
+ GKTT R+ +G I
Sbjct: 10 GIAAHIDAGKTTTT----ERILYYTGRIH 34
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal
recognition particle receptor FtsY {Thermus aquaticus
[TaxId: 271]}
Length = 207
Score = 26.2 bits (57), Expect = 0.97
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 50 LAVMGPSGCGKTTLLNCLAGRVK 72
+ V+G +G GKTT + L +
Sbjct: 9 VLVVGVNGVGKTTTIAKLGRYYQ 31
>d1uf9a_ c.37.1.1 (A:) Dephospho-CoA kinase {Thermus thermophilus
[TaxId: 274]}
Length = 191
Score = 26.1 bits (56), Expect = 1.0
Identities = 10/61 (16%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Query: 49 LLAVMGPSGCGKTTLLNCLAGR----VKLDSGVIRLNKERLNKRWKRKICYVLQQDIFFP 104
++ + G G GK+T+ L + LD+ R + + + + V+ +
Sbjct: 5 IIGITGNIGSGKSTVAALLRSWGYPVLDLDALAARARENKEEELKRLFPEAVVGGRLDRR 64
Query: 105 E 105
Sbjct: 65 A 65
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 237
Score = 26.2 bits (56), Expect = 1.1
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 54 GPSGCGKTTLLNCLA 68
GP G GKT+ + L
Sbjct: 40 GPPGTGKTSTILALT 54
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence
recognition protein Ffh {Archaeon Acidianus ambivalens
[TaxId: 2283]}
Length = 211
Score = 25.9 bits (56), Expect = 1.1
Identities = 12/41 (29%), Positives = 17/41 (41%), Gaps = 4/41 (9%)
Query: 32 DKRPILKDVSGVVKPGELLAVMGPSGCGKTTLLNCLAGRVK 72
DK P + K ++ ++G G GK T LA K
Sbjct: 1 DKEPKVIPD----KIPYVIMLVGVQGTGKATTAGKLAYFYK 37
>d1qhla_ c.37.1.12 (A:) Cell division protein MukB {Escherichia
coli [TaxId: 562]}
Length = 222
Score = 25.8 bits (55), Expect = 1.3
Identities = 5/22 (22%), Positives = 10/22 (45%)
Query: 46 PGELLAVMGPSGCGKTTLLNCL 67
+ + G +G GK+T +
Sbjct: 23 DELVTTLSGGNGAGKSTTMAAF 44
>d1jjva_ c.37.1.1 (A:) Dephospho-CoA kinase {Haemophilus influenzae
[TaxId: 727]}
Length = 205
Score = 26.0 bits (56), Expect = 1.4
Identities = 14/62 (22%), Positives = 23/62 (37%), Gaps = 2/62 (3%)
Query: 49 LLAVMGPSGCGKTTLLNCLA--GRVKLDSGVIRLNKERLNKRWKRKICYVLQQDIFFPEL 106
++ + G G GKTT+ N G +D+ V+ + KI I +
Sbjct: 4 IVGLTGGIGSGKTTIANLFTDLGVPLVDADVVAREVVAKDSPLLSKIVEHFGAQILTEQG 63
Query: 107 TL 108
L
Sbjct: 64 EL 65
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of
N-ethylmalemide-sensitive fusion (NSF) protein {Chinese
hamster (Cricetulus griseus) [TaxId: 10029]}
Length = 246
Score = 26.1 bits (56), Expect = 1.4
Identities = 6/10 (60%), Positives = 6/10 (60%)
Query: 54 GPSGCGKTTL 63
GP GKT L
Sbjct: 47 GPPHSGKTAL 56
>d1zunb3 c.37.1.8 (B:16-237) Sulfate adenylate transferase subunit
cysN/C, EF-Tu domain G-like domain {Pseudomonas
syringae pv. tomato [TaxId: 323]}
Length = 222
Score = 26.0 bits (56), Expect = 1.4
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 4/43 (9%)
Query: 50 LAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRK 92
G GK+T L GR+ DS +I + R +K
Sbjct: 12 FLTCGNVDDGKST----LIGRLLHDSKMIYEDHLEAITRDSKK 50
>d1vmaa2 c.37.1.10 (A:82-294) GTPase domain of the signal
recognition particle receptor FtsY {Thermotoga maritima
[TaxId: 2336]}
Length = 213
Score = 25.9 bits (56), Expect = 1.4
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 45 KPGELLAVMGPSGCGKTTLLNCLAGRVK 72
+P ++ V+G +G GKTT LA
Sbjct: 9 EPPFVIMVVGVNGTGKTTSCGKLAKMFV 36
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal
recognition particle receptor FtsY {Escherichia coli
[TaxId: 562]}
Length = 211
Score = 25.4 bits (55), Expect = 1.9
Identities = 9/28 (32%), Positives = 17/28 (60%)
Query: 45 KPGELLAVMGPSGCGKTTLLNCLAGRVK 72
K ++ ++G +G GKTT + LA + +
Sbjct: 7 KAPFVILMVGVNGVGKTTTIGKLARQFE 34
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB
{Thermotoga maritima [TaxId: 2336]}
Length = 238
Score = 25.3 bits (54), Expect = 2.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 54 GPSGCGKTTLLNCLAGRVKLDSGVI 78
GP G GKTTL + +A ++ + V
Sbjct: 42 GPPGLGKTTLAHIIASELQTNIHVT 66
>d1aa7a_ a.95.1.1 (A:) Influenza virus matrix protein M1
{Influenza A virus [TaxId: 11320]}
Length = 158
Score = 25.0 bits (54), Expect = 2.1
Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 9/48 (18%)
Query: 1 VVSNIPSLPPEKYPLSHRPLELVFSGLSVTLD-------KRPILKDVS 41
V+S IPS P + + LE VF+G + L+ RPIL ++
Sbjct: 11 VLSIIPSGPLK--AEIAQRLEDVFAGKNTDLEVLMEWLKTRPILSPLT 56
>d1uaaa1 c.37.1.19 (A:2-307) DEXX box DNA helicase {Escherichia
coli, RepD [TaxId: 562]}
Length = 306
Score = 25.5 bits (54), Expect = 2.4
Identities = 6/22 (27%), Positives = 10/22 (45%)
Query: 43 VVKPGELLAVMGPSGCGKTTLL 64
V V+ +G GKT ++
Sbjct: 10 VEFVTGPCLVLAGAGSGKTRVI 31
>d1xbta1 c.37.1.24 (A:18-150) Thymidine kinase, TK1, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 133
Score = 24.7 bits (53), Expect = 2.4
Identities = 11/50 (22%), Positives = 21/50 (42%)
Query: 47 GELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICYV 96
G++ ++GP GK+T L R ++ + K + R+ C
Sbjct: 2 GQIQVILGPMFSGKSTELMRRVRRFQIAQYKCLVIKYAKDTRYSSSFCTH 51
>d1pjra1 c.37.1.19 (A:1-318) DEXX box DNA helicase {Bacillus
stearothermophilus, PcrA [TaxId: 1422]}
Length = 318
Score = 25.0 bits (53), Expect = 2.6
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 50 LAVMGPSGCGKTTLL 64
L +M +G GKT +L
Sbjct: 27 LLIMAGAGSGKTRVL 41
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus
thermophilus [TaxId: 274]}
Length = 387
Score = 25.0 bits (54), Expect = 2.7
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 54 GPSGCGKTTLLNCLAGRV 71
G G GKT ++ LA R+
Sbjct: 50 GEPGVGKTAIVEGLAQRI 67
>d1xx6a1 c.37.1.24 (A:2-142) Thymidine kinase, TK1, N-terminal
domain {Clostridium acetobutylicum [TaxId: 1488]}
Length = 141
Score = 24.7 bits (53), Expect = 3.3
Identities = 6/18 (33%), Positives = 10/18 (55%)
Query: 47 GELLAVMGPSGCGKTTLL 64
G + ++GP GK+ L
Sbjct: 7 GWVEVIVGPMYSGKSEEL 24
>d1vhta_ c.37.1.1 (A:) Dephospho-CoA kinase {Escherichia coli
[TaxId: 562]}
Length = 208
Score = 24.4 bits (52), Expect = 3.9
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 49 LLAVMGPSGCGKTTLLNCLA 68
++A+ G G GK+T+ N A
Sbjct: 5 IVALTGGIGSGKSTVANAFA 24
>d2b8ta1 c.37.1.24 (A:11-149) Thymidine kinase, TK1, N-terminal
domain {Ureaplasma urealyticum [TaxId: 2130]}
Length = 139
Score = 24.3 bits (52), Expect = 4.3
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 47 GELLAVMGPSGCGKTTLL 64
G + + GP GKT L
Sbjct: 2 GWIEFITGPMFAGKTAEL 19
>d1jl0a_ d.156.1.1 (A:) S-adenosylmethionine decarboxylase {Human
(Homo sapiens) [TaxId: 9606]}
Length = 325
Score = 24.5 bits (53), Expect = 4.5
Identities = 6/10 (60%), Positives = 6/10 (60%)
Query: 58 CGKTTLLNCL 67
CG T LL L
Sbjct: 78 CGTTLLLKAL 87
>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo
sapiens), different isozymes [TaxId: 9606]}
Length = 176
Score = 24.1 bits (51), Expect = 4.8
Identities = 8/16 (50%), Positives = 8/16 (50%)
Query: 44 VKPGELLAVMGPSGCG 59
VKPG V G G G
Sbjct: 27 VKPGSTCVVFGLGGVG 42
>d1ihua2 c.37.1.10 (A:308-586) Arsenite-translocating ATPase ArsA
{Escherichia coli [TaxId: 562]}
Length = 279
Score = 24.2 bits (51), Expect = 4.8
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 5/41 (12%)
Query: 33 KRPILKDVSGVVKPGE-----LLAVMGPSGCGKTTLLNCLA 68
+RP + +S +V L+ +MG G GKTT+ +A
Sbjct: 1 QRPDIPSLSALVDDIARNEHGLIMLMGKGGVGKTTMAAAIA 41
>d2c78a3 c.37.1.8 (A:9-212) Elongation factor Tu (EF-Tu),
N-terminal (G) domain {Thermus thermophilus [TaxId:
274]}
Length = 204
Score = 24.1 bits (52), Expect = 5.0
Identities = 10/39 (25%), Positives = 14/39 (35%), Gaps = 4/39 (10%)
Query: 45 KPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKE 83
KP + +G GKTTL + + N E
Sbjct: 1 KPHVNVGTIGHVDHGKTTLT----AALTYVAAAENPNVE 35
>d1a1va1 c.37.1.14 (A:190-325) HCV helicase domain {Human
hepatitis C virus (HCV), different isolates [TaxId:
11103]}
Length = 136
Score = 24.0 bits (51), Expect = 5.5
Identities = 5/13 (38%), Positives = 9/13 (69%)
Query: 52 VMGPSGCGKTTLL 64
+ P+G GK+T +
Sbjct: 13 LHAPTGSGKSTKV 25
>d1khba1 c.91.1.1 (A:260-622) Cytosolic phosphoenolpyruvate
carboxykinase (GTP-hydrolyzing) {Human (Homo sapiens)
[TaxId: 9606]}
Length = 363
Score = 24.0 bits (52), Expect = 5.7
Identities = 7/9 (77%), Positives = 7/9 (77%)
Query: 55 PSGCGKTTL 63
PS CGKT L
Sbjct: 26 PSACGKTNL 34
>d1deka_ c.37.1.1 (A:) Deoxynucleoside monophosphate kinase
{Bacteriophage T4 [TaxId: 10665]}
Length = 241
Score = 24.1 bits (51), Expect = 5.8
Identities = 5/22 (22%), Positives = 9/22 (40%)
Query: 49 LLAVMGPSGCGKTTLLNCLAGR 70
L+ + G GK T + +
Sbjct: 3 LIFLSGVKRSGKDTTADFIMSN 24
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis
elegans [TaxId: 6239]}
Length = 277
Score = 23.6 bits (50), Expect = 9.2
Identities = 8/77 (10%), Positives = 23/77 (29%), Gaps = 10/77 (12%)
Query: 45 KPGELLAVMGPSGCGKTTLLNCLAGRVKLDSGVIRLNKERLNKRWKRKICYVLQQDIFFP 104
L + G +G GK+ + + + + + + + +
Sbjct: 42 LDSFFLFLHGRAGSGKSVIASQ----------ALSKSDQLIGINYDSIVWLKDSGTAPKS 91
Query: 105 ELTLRQTLEVSIADEDE 121
L + + + ED+
Sbjct: 92 TFDLFTDILLMLKSEDD 108
>d1cp2a_ c.37.1.10 (A:) Nitrogenase iron protein {Clostridium
pasteurianum [TaxId: 1501]}
Length = 269
Score = 23.4 bits (49), Expect = 9.8
Identities = 7/19 (36%), Positives = 10/19 (52%)
Query: 50 LAVMGPSGCGKTTLLNCLA 68
+A+ G G GK+T L
Sbjct: 4 VAIYGKGGIGKSTTTQNLT 22
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.140 0.410
Gapped
Lambda K H
0.267 0.0435 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 445,033
Number of extensions: 18488
Number of successful extensions: 364
Number of sequences better than 10.0: 1
Number of HSP's gapped: 361
Number of HSP's successfully gapped: 238
Length of query: 121
Length of database: 2,407,596
Length adjustment: 75
Effective length of query: 46
Effective length of database: 1,377,846
Effective search space: 63380916
Effective search space used: 63380916
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 47 (22.6 bits)