RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16347
(288 letters)
>d1mkpa_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pyst1
(mkp3) [TaxId: 9606]}
Length = 144
Score = 106 bits (265), Expect = 4e-29
Identities = 73/114 (64%), Positives = 93/114 (81%)
Query: 40 DYVLNVTADLPNVFEATGSIKYMQIPIADHWSQNLATYFPQAIQFIEEARSQDTGVLVHC 99
Y+LNVT +LPN+FE G KY QIPI+DHWSQNL+ +FP+AI FI+EAR ++ GVLVH
Sbjct: 31 KYILNVTPNLPNLFENAGEFKYKQIPISDHWSQNLSQFFPEAISFIDEARGKNCGVLVHS 90
Query: 100 LAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFEKEL 153
LAG+SRSVT+TVAYLM L LS+NDA+ +V+ +KSNI+PNF+FM QL FE+ L
Sbjct: 91 LAGISRSVTVTVAYLMQKLNLSMNDAYDIVKMKKSNISPNFNFMGQLLDFERTL 144
Score = 36.7 bits (84), Expect = 0.001
Identities = 30/46 (65%), Positives = 37/46 (80%)
Query: 243 TYVLNVTADLPNVFEATGSIKYMQIPIADHWSQNLATYFPQAIQFI 288
Y+LNVT +LPN+FE G KY QIPI+DHWSQNL+ +FP+AI FI
Sbjct: 31 KYILNVTPNLPNLFENAGEFKYKQIPISDHWSQNLSQFFPEAISFI 76
>d1m3ga_ c.45.1.1 (A:) Mapk phosphatase {Human (Homo sapiens), pac-1
[TaxId: 9606]}
Length = 145
Score = 102 bits (254), Expect = 2e-27
Identities = 50/114 (43%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
Query: 41 YVLNVTADLPNVFEATGSIKYMQIPIADHWSQNLATYFPQAIQFIEEARSQDTGVLVHCL 100
VLNV+A PN FE G +Y IP+ D+ ++ +F +AI FI+ ++ VLVH
Sbjct: 32 AVLNVSASCPNHFE--GLFRYKSIPVEDNQMVEISAWFQEAIGFIDWVKNSGGRVLVHSQ 89
Query: 101 AGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFEKELM 154
AG+SRS TI +AYLM + R+ L++AF V+ R+ I+PNF FM QL FE +++
Sbjct: 90 AGISRSATICLAYLMQSRRVRLDEAFDFVKQRRGVISPNFSFMGQLLQFETQVL 143
>d1vhra_ c.45.1.1 (A:) VH1-related dual-specificity phosphatase, VHR
{Human (Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 96.8 bits (240), Expect = 3e-25
Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 11/126 (8%)
Query: 41 YVLNVTADL--------PNVFEATGSIKYMQIPIADHWSQNLATYFPQAIQFIEEARSQD 92
+VLN N ++ +G I Y+ I D NL+ YF +A FI++A +Q
Sbjct: 51 HVLNAAEGRSFMHVNTNANFYKDSG-ITYLGIKANDTQEFNLSAYFERAADFIDQALAQK 109
Query: 93 TG-VLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFEK 151
G VLVHC G SRS T+ +AYLM ++ + A ++VR + I PN F+ QL
Sbjct: 110 NGRVLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQLCQLND 168
Query: 152 ELMEAR 157
L +
Sbjct: 169 RLAKEG 174
Score = 29.7 bits (66), Expect = 0.24
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 9/54 (16%)
Query: 243 TYVLNVTADL--------PNVFEATGSIKYMQIPIADHWSQNLATYFPQAIQFI 288
T+VLN N ++ +G I Y+ I D NL+ YF +A FI
Sbjct: 50 THVLNAAEGRSFMHVNTNANFYKDSG-ITYLGIKANDTQEFNLSAYFERAADFI 102
>d1i9sa_ c.45.1.1 (A:) mRNA capping enzyme, triphosphatase domain
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 194
Score = 92.8 bits (230), Expect = 1e-23
Identities = 33/177 (18%), Positives = 62/177 (35%), Gaps = 28/177 (15%)
Query: 8 RWLDTPTISS--------LSTP--------IAKINRGGP---ISTLGTHYRD--YVLNVT 46
RWL+ P L T +A+ NR P + L + ++++T
Sbjct: 5 RWLNCPRRGQPVAGRFLPLKTMLGPRYDSQVAEENRFHPSMLSNYLKSLKVKMSLLVDLT 64
Query: 47 ADL----PNVFEATGSIKYMQIPIADHWSQNLATYFPQAIQFIEEARSQDTG--VLVHCL 100
N E G IKY+++ H I+ E + + VHC
Sbjct: 65 NTSRFYDRNDIEKEG-IKYIKLQCKGHGECPTTENTETFIRLCERFNERSPPELIGVHCT 123
Query: 101 AGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSNIAPNFHFMEQLNSFEKELMEAR 157
G +R+ + A+L+ + S+ A + ++++L ++ EA
Sbjct: 124 HGFNRTGFLICAFLVEKMDWSIEAAVATFAQARPPGIYKGDYLKELFRRYGDIEEAP 180
>d1ohea2 c.45.1.1 (A:199-380) Proline directed phosphatase CDC14b2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 182
Score = 74.3 bits (182), Expect = 9e-17
Identities = 23/135 (17%), Positives = 51/135 (37%), Gaps = 10/135 (7%)
Query: 31 ISTLGTHYRDYVLNVTADLPNVFEATGS-IKYMQIPIADHWSQNLATYFPQAIQFIEEAR 89
I H ++ + + + T + + + AD + A +F++
Sbjct: 51 IQYFKNHNVTTIIRLNKRMYDAKRFTDAGFDHHDLFFADGSTPTDA----IVKEFLDICE 106
Query: 90 SQDTGVLVHCLAGVSRSVTITVAYLMSALRLSLNDAFTLVRARKSN--IAPNFHFMEQLN 147
+ + + VH AG+ R+ T+ Y+M R++ + VR + I P F+
Sbjct: 107 NAEGAIAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQFLVMKQ 166
Query: 148 S---FEKELMEARLQ 159
+ E + +L+
Sbjct: 167 TNLWLEGDYFRQKLK 181
>d1fpza_ c.45.1.1 (A:) Kinase associated phosphatase (kap) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 176
Score = 69.3 bits (169), Expect = 6e-15
Identities = 22/108 (20%), Positives = 42/108 (38%), Gaps = 4/108 (3%)
Query: 48 DLPNVFEATGSIKYMQIPIADHWSQNLATYFPQAIQFIEEARSQDTGVLVHCLAGVSRSV 107
+L ++++ G I PIAD + ++A + ++ + L+H G+ RS
Sbjct: 67 NLLDLYQQCG-IITHHHPIADGGTPDIA-SCCEIMEELTTCLKNYRKTLIHSYGGLGRSC 124
Query: 108 TITVAYLMSALR-LSLNDAFTLVRA-RKSNIAPNFHFMEQLNSFEKEL 153
+ L+ +S A +R R S L+ F +L
Sbjct: 125 LVAACLLLYLSDTISPEQAIDSLRDLRGSGAIQTIKQYNYLHEFRDKL 172
>d1d5ra2 c.45.1.1 (A:14-187) Phoshphoinositide phosphatase Pten
(Pten tumor suppressor), N-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 174
Score = 49.6 bits (118), Expect = 5e-08
Identities = 26/138 (18%), Positives = 44/138 (31%), Gaps = 20/138 (14%)
Query: 28 GGPISTLGTHYRDYVLNVTADLPNVFEATGSI----------------KYMQIPIADHWS 71
G P L YR+ + +V L + + I + Q P DH
Sbjct: 23 GFPAERLEGVYRNNIDDVVRFLDSKHKNHYKIYNLCAERHYDTAKFNCRVAQYPFEDHNP 82
Query: 72 QNLATYFPQAIQFIEEARSQDTG--VLVHCLAGVSRSVTITVAYLM-SALRLSLNDAFTL 128
L + +++ S+D +HC AG R+ + AYL+ L +A
Sbjct: 83 PQLEL-IKPFCEDLDQWLSEDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDF 141
Query: 129 VRARKSNIAPNFHFMEQL 146
++ Q
Sbjct: 142 YGEVRTRDKKGVTIPSQR 159
>d1rxda_ c.45.1.1 (A:) Protein tyrosine phosphatase type IVa {Human
(Homo sapiens), pr-1 [TaxId: 9606]}
Length = 152
Score = 48.9 bits (116), Expect = 6e-08
Identities = 17/108 (15%), Positives = 42/108 (38%), Gaps = 10/108 (9%)
Query: 50 PNVFEATGSIKYMQIPIADHWSQNLATYFPQAIQFIEEARSQDTG--VLVHCLAGVSRSV 107
+ E G I + P D + + ++ ++ G + VHC+AG+ R+
Sbjct: 47 TTLVEKEG-IHVLDWPFDDGAPPSNQIVD-DWLSLVKIKFREEPGCCIAVHCVAGLGRAP 104
Query: 108 TITVAYLMSALRLSLNDAFTLVRARKSN--IAPNFHFMEQLNSFEKEL 153
+ L+ + DA +R ++ + ++E+ + ++
Sbjct: 105 VLVALALIE-GGMKYEDAVQFIRQKRRGAFNSKQLLYLEK---YRPKM 148
>d2pt0a1 c.45.1.4 (A:34-346) Myo-inositol hexaphosphate
phosphohydrolase (phytase) PhyA {Selenomonas ruminantium
[TaxId: 971]}
Length = 313
Score = 48.9 bits (116), Expect = 2e-07
Identities = 21/84 (25%), Positives = 29/84 (34%), Gaps = 4/84 (4%)
Query: 52 VFEATGSIKYMQIPIADHWSQNLATYFPQAIQFIEEARSQDTGVLVHCLAGVSRSVTITV 111
V EA G ++Y +I DH + + F D + HC AGV R+ V
Sbjct: 175 VAEAAG-MRYFRIAATDHVWPTPEN-IDRFLAFYRTLPQ-DAWLHFHCEAGVGRTTAFMV 231
Query: 112 AYLM-SALRLSLNDAFTLVRARKS 134
M +SL D
Sbjct: 232 MTDMLKNPSVSLKDILYRQHEIGG 255
>d2dj8a1 g.85.1.1 (A:8-54) Zinc finger MYND domain-containing
protein 2, MTG8 {Human (Homo sapiens) [TaxId: 9606]}
Length = 47
Score = 28.8 bits (64), Expect = 0.078
Identities = 10/39 (25%), Positives = 18/39 (46%), Gaps = 8/39 (20%)
Query: 159 QQQEAADKCDSCGRPKSSASDPCTACVVTSAGSTSYLSP 197
QQ+++++ C +CGR S C+ C + Y
Sbjct: 3 QQEDSSESCWNCGRKASET---CSGC-----NTARYCGS 33
>d1zhva2 d.58.18.8 (A:62-127) Hypothetical protein Atu0741
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 66
Score = 27.3 bits (61), Expect = 0.41
Identities = 9/41 (21%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Query: 15 ISSLSTPIAKINRGGPISTLGTHYRDYVLNVTADLPNVFEA 55
+ S+ +P++ G I + T D++L + DL +
Sbjct: 19 VLSVISPLST--NGIGIFVVSTFDGDHLLVRSNDLEKTADL 57
>d1ywfa1 c.45.1.5 (A:4-275) Phosphotyrosine protein phosphatase PtpB
{Mycobacterium tuberculosis [TaxId: 1773]}
Length = 272
Score = 29.4 bits (65), Expect = 0.46
Identities = 23/122 (18%), Positives = 43/122 (35%), Gaps = 2/122 (1%)
Query: 4 RATGRWLDTPTISSLSTPIAKINRGGPISTLGTHYRDYVLNVTADLPNVFEATGSIKYMQ 63
R GR D + L P + + T ++ + N ++ + +
Sbjct: 61 RGPGRVPDGIDVHLLPFPDLADDDADDSAPHETAFKRLLTNDGSNGESGESSQSINDAAT 120
Query: 64 IPIADHWSQNLATYFPQ-AIQFIEEARSQDTGVLVHCLAGVSRSVTITVAYLMSALRLSL 122
+ D + Q Q A+ + + VL HC AG R+ VA ++ A+ L
Sbjct: 121 RYMTDEYRQFPTRNGAQRALHRVVTLLAAGRPVLTHCFAGKDRT-GFVVALVLEAVGLDR 179
Query: 123 ND 124
+
Sbjct: 180 DV 181
>d2shpa1 c.45.1.2 (A:219-525) Tyrosine phosphatase {Human (Homo
sapiens), shp-2 [TaxId: 9606]}
Length = 307
Score = 28.3 bits (62), Expect = 0.97
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 78 FPQAIQFIEEARSQDTGVLVHCLAGVSRSVT-ITVAYLMSALR 119
F + + +E+ V+VHC AG+ R+ T I + L+ +R
Sbjct: 220 FLEEVHHKQESIMDAGPVVVHCSAGIGRTGTFIVIDILIDIIR 262
>d1yfoa_ c.45.1.2 (A:) Tyrosine phosphatase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 288
Score = 25.9 bits (56), Expect = 5.9
Identities = 11/54 (20%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Query: 68 DHWSQNLATYFPQAIQFIEEARSQDTG-VLVHCLAGVSRSVT-ITVAYLMSALR 119
D + ++ ++ Q G ++VHC AGV R+ T + + ++ +
Sbjct: 194 DFGVPFTPIGMLKFLKKVKACNPQYAGAIVVHCSAGVGRTGTFVVIDAMLDMMH 247
>d1rjda_ c.66.1.37 (A:) Leucine carboxy methyltransferase Ppm1
{Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 328
Score = 25.8 bits (56), Expect = 7.6
Identities = 4/40 (10%), Positives = 14/40 (35%)
Query: 48 DLPNVFEATGSIKYMQIPIADHWSQNLATYFPQAIQFIEE 87
++P + + + YM + + + F + +
Sbjct: 192 EIPTIVISECLLCYMHNNESQLLINTIMSKFSHGLWISYD 231
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.320 0.132 0.400
Gapped
Lambda K H
0.267 0.0471 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,053,666
Number of extensions: 45302
Number of successful extensions: 132
Number of sequences better than 10.0: 1
Number of HSP's gapped: 127
Number of HSP's successfully gapped: 21
Length of query: 288
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 204
Effective length of database: 1,254,276
Effective search space: 255872304
Effective search space used: 255872304
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 52 (24.4 bits)