BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16349
(351 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|357603305|gb|EHJ63704.1| hypothetical protein KGM_12514 [Danaus plexippus]
Length = 349
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 121/351 (34%), Positives = 210/351 (59%), Gaps = 11/351 (3%)
Query: 3 VLRSLIFSSSVPRKVFSISEVVSFHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPDSK 62
+ RSL F++S+ +I+ + S + YYAARKGTRA+ KKV+ EI KV + P ++
Sbjct: 5 IFRSL-FNTSLTLNKTNITTIRSINIGAVYYAARKGTRAKARAKKVKVEITKVGFIPHNQ 63
Query: 63 KKKD----IYASRKVDESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPR 118
+ K+ I+ ++ +D+SN +DD+Y + Y+ ++ +EA+ A +ETHHPTMYN+P
Sbjct: 64 RGKNKDTKIHVNKHLDDSNKQISKDDVYPMRYYRWVVYTAEEAVLAHKETHHPTMYNVPD 123
Query: 119 AFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGV 178
A + A VE++ KK +Y+D ++ + + F E+R+I+AFC E Q+ + G
Sbjct: 124 ALVFAQVELNMEA-VKKNRYIDNFSRLTLLPRIFPRDEERTILAFCKGPELIKQVAEAGA 182
Query: 179 ALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIG 238
G ++ +K I+ G + + + +VI +P IL +L+ IRGL+K+R P+ + TL ++
Sbjct: 183 TTAGSTELVKKIQEGSLKLSDYDYVIAHPNILTELVPIRGLMKRRFPSPNNGTLDANICD 242
Query: 239 IAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPE 298
+ K+ G++Y + KD +Q+FG + +GRLDM + + +N+ +L DI + +P
Sbjct: 243 LVKKFAAGVQYRVVKDEHQQNFGSVEVPVGRLDMDAQHIVENVDALLKDIQSARP---KR 299
Query: 299 DEDFITRILLWSEPSPEKFKLDLSGLIEKPKAKELDTGEEIDDEPKEMAAQ 349
+ FITR + S PS EK K+D +++ +KE+ E+ DDE + +AA+
Sbjct: 300 EGLFITRCFITSPPSSEKLKIDPFVHVDRTLSKEVQ--EDSDDEDEAVAAR 348
>gi|332374058|gb|AEE62170.1| unknown [Dendroctonus ponderosae]
Length = 357
Score = 214 bits (546), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 123/315 (39%), Positives = 180/315 (57%), Gaps = 9/315 (2%)
Query: 33 YAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIY----ASRKVDESNLTYPEDDIYLQ 88
YAARKGTR RK KV+ E+KK+ + P + + ++ AS+K D+S P DD+Y+
Sbjct: 42 YAARKGTRERKSKAKVKMEVKKIGFIPHNLRNREKMLASRASKKYDDSWKRDPIDDVYVM 101
Query: 89 KDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEV 148
K YK + F +A+ A RETHHP +YN P A + T++++ +KK +++D + I +
Sbjct: 102 KYYKWTVHSFVDAVKAHRETHHPEIYNRPNAELFVTIDLNMQG-EKKTRFVDNFKRIAGI 160
Query: 149 EHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
H FD E+R++IAF E+ + G + G D IK I+ G V + FQ VI +P
Sbjct: 161 PHKFDIKEERTVIAFAKNTESIQEAIKAGAQMSGGVDLIKQIQNGQVLLQDFQHVIAHPD 220
Query: 209 ILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIG 268
ILA+L+ +RG++KK+ P KS TL +L + R GI Y KD E DFG + IG
Sbjct: 221 ILAELLVLRGIMKKKFPNTKSGTLDANLGPVVDRFLNGIAYQALKDEYEHDFGQIETVIG 280
Query: 269 RLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSG-LIEK 327
L+M E LE N ++ DI T KP + + F+TR LLWS PS EK K+ S LI+
Sbjct: 281 TLNMDPEDLERNFIALINDIYTQKPKREGQ---FVTRCLLWSPPSDEKLKVGFSHYLIDN 337
Query: 328 PKAKELDTGEEIDDE 342
K + +E+ +E
Sbjct: 338 KKKASEEAADEVIEE 352
>gi|194904031|ref|XP_001980988.1| GG24696 [Drosophila erecta]
gi|190652691|gb|EDV49946.1| GG24696 [Drosophila erecta]
Length = 354
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 117/298 (39%), Positives = 183/298 (61%), Gaps = 7/298 (2%)
Query: 26 FHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIY---ASRKVDESNLTYPE 82
H + AARKGTR + KKV+ E+KKV + P +++ K I A + VD+S P+
Sbjct: 24 LHLSAVSEAARKGTREKARKKKVKVEVKKVGFIPHNQRNKKINMKRADKHVDDSWKQVPK 83
Query: 83 DDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPW 142
DD Y+ + Y+ ++ QEA+ RETHHPTMYN+P A + +E++ +K +++D +
Sbjct: 84 DDCYVGRYYRWPVYSVQEAVQCHRETHHPTMYNVPNAPLNVDIELNMQA-EKITRFVDNF 142
Query: 143 THIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+ + H FDHGE+R II F + + ++ G +LVG + IK I G + + +Q+
Sbjct: 143 QRMAMIPHKFDHGEERKIIVFTKGNNEVLEAREAGASLVGGVELIKDITNGELLLSDYQY 202
Query: 203 VICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
+I +P ILA+L+ +RGL+K++ P KS+TLG +L + + +GI YS KD +Q+FG
Sbjct: 203 IIAHPNILAELVALRGLMKRKFPNPKSETLGTNLAEMIVKFSSGISYSAAKDEYQQNFGL 262
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
+G LDM ++LEDN+K +L DI+TM+P + FITR+LL S PS E+ K+D
Sbjct: 263 ITASVGTLDMDAQKLEDNIKFLLQDINTMRP---KREGRFITRVLLKSPPSSEQLKID 317
>gi|195394473|ref|XP_002055867.1| GJ10532 [Drosophila virilis]
gi|194142576|gb|EDW58979.1| GJ10532 [Drosophila virilis]
Length = 353
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 115/299 (38%), Positives = 181/299 (60%), Gaps = 7/299 (2%)
Query: 25 SFHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIY---ASRKVDESNLTYP 81
H AARKGTR + KKV+ E+KKV + P +++ K I A + VD+S P
Sbjct: 22 CLHLTAVTEAARKGTREKARKKKVKVEVKKVGFIPHNQRDKKINVKRADKHVDDSWKQVP 81
Query: 82 EDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDP 141
+DD+Y+ + Y+ ++ EA+ RETHHP+MYN+P A + +E++ +K +++D
Sbjct: 82 KDDVYVGRYYRWPVYTVAEAIQCHRETHHPSMYNVPNASLNVEIELNMQG-EKATRFVDN 140
Query: 142 WTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
+ + + H F HGEDR II F ++E + ++ G LVG + IK I G + + +Q
Sbjct: 141 FQRMAMIPHKFHHGEDRKIIVFTKENEEITKAREAGATLVGGVELIKDITNGELLLSDYQ 200
Query: 202 FVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFG 261
F+I +P ILA+L+ +RGL+K++ P KS+TLG +L + + GI YS KD +Q+FG
Sbjct: 201 FIIAHPNILAELVALRGLMKRKFPNPKSETLGTNLAEMITKFSNGISYSATKDEYQQNFG 260
Query: 262 YSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
++G LDM + LE+N++ +L D++TM+P D FITR+LL S PS E+ K+D
Sbjct: 261 LIKANVGTLDMDAQHLEENIRFLLQDVNTMRP---KRDGRFITRVLLKSAPSSEQLKID 316
>gi|195499052|ref|XP_002096784.1| GE25864 [Drosophila yakuba]
gi|194182885|gb|EDW96496.1| GE25864 [Drosophila yakuba]
Length = 354
Score = 210 bits (535), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 183/298 (61%), Gaps = 7/298 (2%)
Query: 26 FHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIY---ASRKVDESNLTYPE 82
H + AARKGTR + KKV+ E+KKV + P +++ K I A + VD+S P+
Sbjct: 24 LHLSAVSEAARKGTREKARKKKVKVEVKKVGFIPHNQRNKKINVKRADKHVDDSWKQVPK 83
Query: 83 DDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPW 142
DD Y+ + Y+ ++ QEA+ RETHHP+MYN+P A + +E++ +K +++D +
Sbjct: 84 DDCYVGRYYRWPVYSVQEAIQCHRETHHPSMYNVPNAPLNVDIELNMQA-EKITRFVDNF 142
Query: 143 THIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+ + H FDHGE+R II F + + ++ G +LVG + IK I G + + +Q+
Sbjct: 143 QRMAMIPHKFDHGEERKIIVFTKGNNEVLEAREAGASLVGGVELIKDITNGELLLSDYQY 202
Query: 203 VICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
+I +P ILA+L+ +RGL+K++ P KS+TLG +L + + +GI YS KD +Q+FG
Sbjct: 203 IIAHPNILAELVALRGLMKRKFPNPKSETLGTNLAEMIVKFSSGISYSAAKDEYQQNFGL 262
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
+G LDM ++LEDN+K +L DI+TM+P + FITR+LL S PS E+ K+D
Sbjct: 263 ITASVGTLDMDAQKLEDNIKFLLQDINTMRP---KREGRFITRVLLKSPPSSEQLKID 317
>gi|195108505|ref|XP_001998833.1| GI24185 [Drosophila mojavensis]
gi|193915427|gb|EDW14294.1| GI24185 [Drosophila mojavensis]
Length = 355
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 114/299 (38%), Positives = 181/299 (60%), Gaps = 7/299 (2%)
Query: 25 SFHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIY---ASRKVDESNLTYP 81
H AARKGTR + KKV+ E+KKV + P +++ K I A + VD+S P
Sbjct: 23 CLHLTAVTEAARKGTREKARKKKVKVEVKKVGFIPHNQRDKKINVKRADKHVDDSWKQVP 82
Query: 82 EDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDP 141
+DD+Y+ + Y+ ++ EA+ RETHHPTMYN+P A + +E++ +K +++D
Sbjct: 83 KDDVYVGRYYRWPVYTVAEAIQCHRETHHPTMYNVPNASLNVEIELNMQG-EKATRFVDN 141
Query: 142 WTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
+ + + H FDHGE+R II F ++ + ++ G LVG + IK I G + + +Q
Sbjct: 142 FQRMAMIPHKFDHGEERKIIVFTKGNDEIVEAREAGATLVGGVELIKDITAGELLLSDYQ 201
Query: 202 FVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFG 261
F+I +P IL +L+ +RGL+K++ P KS+TLGV+L + + GI YS KD +Q+FG
Sbjct: 202 FIIAHPNILPELVALRGLMKRKFPNPKSETLGVNLAEMVVKFSNGISYSATKDEYQQNFG 261
Query: 262 YSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
++G LDM + LE+N++ +L D+++M+P D FITR+LL S PS E+ K+D
Sbjct: 262 LIKANVGTLDMDAQHLEENIRFLLQDVNSMRP---KRDGRFITRVLLKSAPSSEQLKID 317
>gi|242247557|ref|NP_001156081.1| mitochondrial ribosomal protein L1 [Acyrthosiphon pisum]
gi|239791057|dbj|BAH72044.1| ACYPI001497 [Acyrthosiphon pisum]
Length = 340
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 114/298 (38%), Positives = 171/298 (57%), Gaps = 6/298 (2%)
Query: 33 YAARKGTRARKEGKKVRTEIKKVA----WTPDSKKKKDIYASRKVDESNLTYPEDDIYLQ 88
Y ARK TR RK + +A + P KKK+ +SR ++ DD+YL
Sbjct: 22 YRARKCTRERKAKIHKKNRAANLAKARKYIPILKKKQLEKSSRTIETFPWRSSNDDVYLG 81
Query: 89 KDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEV 148
++R + EA+ A RE HHPTM N+P A + +EI +T KK K++D + I+E+
Sbjct: 82 LFNQMRRYNLLEAILAHRELHHPTMINVPNAPLNVRLEIDLST-DKKNKFVDKYHKIIEL 140
Query: 149 EHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
HS+DHGEDR+I+AFC E + ++ G LVG + IK IERGL+ +P FQ+V+ +P
Sbjct: 141 PHSYDHGEDRTILAFCQSAEMMEEARNAGAMLVGGKEVIKSIERGLIMLPDFQYVLAHPD 200
Query: 209 ILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIG 268
IL +L IRGLL+KR P+L+ +L +DL+ + K GIKY+M+ DP ++ G + IG
Sbjct: 201 ILTELPAIRGLLRKRYPSLQHGSLTLDLVAMVKHYIKGIKYNMQVDPFDEALGIVEMKIG 260
Query: 269 RLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLIE 326
+L L +N + + DI T K P + + F+ R L + S EKF ++LS +
Sbjct: 261 QLSDEPNHLIENFETLFKDIMT-KAPKRAKPSPFVIRCLAQTPASREKFSINLSQFVN 317
>gi|17737843|ref|NP_524275.1| mitochondrial ribosomal protein L1 [Drosophila melanogaster]
gi|15291911|gb|AAK93224.1| LD31571p [Drosophila melanogaster]
gi|23175907|gb|AAF54214.2| mitochondrial ribosomal protein L1 [Drosophila melanogaster]
gi|220946058|gb|ACL85572.1| mRpL1-PA [synthetic construct]
gi|220955810|gb|ACL90448.1| mRpL1-PA [synthetic construct]
Length = 354
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/352 (36%), Positives = 204/352 (57%), Gaps = 17/352 (4%)
Query: 1 MSVLRSLIFSSSVPRKVFSISEVVSFHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPD 60
+S +R+L S ++ + H + AARKGTR + KKV+ E+KKV + P
Sbjct: 5 LSSMRALALRQS------TVEPLRLLHLSAVSEAARKGTREKARKKKVKVEVKKVGFIPH 58
Query: 61 SKKKKDIY---ASRKVDESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLP 117
+++ K I A + VD+S P+DD Y+ + Y+ ++ QEA+ RETHHP+MYN+P
Sbjct: 59 NQRNKKINVKRADKHVDDSWKQVPKDDCYVGRYYRWPVYSVQEAIQCHRETHHPSMYNVP 118
Query: 118 RAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMG 177
A + +E++ +K +++D + + + H FDHGE+R II F + + ++ G
Sbjct: 119 NAPLNLDIELNMQA-EKITRFVDNFQRMAMIPHKFDHGEERKIIVFTKGNNEVLEAREAG 177
Query: 178 VALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLI 237
+LVG + IK I G + + +Q+VI +P ILA+L+ +RGL+K++ P KS+TLG +L
Sbjct: 178 ASLVGGVELIKDITSGELLLSDYQYVIAHPNILAELVALRGLMKRKFPNPKSETLGTNLA 237
Query: 238 GIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKP 297
+ + +GI YS KD +Q+FG +G LDM ++LE+N+K +L DI+TM+P
Sbjct: 238 EMIVKFSSGISYSAAKDEYQQNFGLITASVGTLDMDVQKLEENIKFLLQDINTMRP---K 294
Query: 298 EDEDFITRILLWSEPSPEKFKLD----LSGLIEKPKAKELDTGEEIDDEPKE 345
+ FITR+LL S PS E+ K+D + + +K AK G + EP E
Sbjct: 295 REGRFITRVLLKSPPSSEQLKIDPFVYVPEMWDKSTAKVKRDGAKKQTEPAE 346
>gi|195036398|ref|XP_001989657.1| GH18673 [Drosophila grimshawi]
gi|193893853|gb|EDV92719.1| GH18673 [Drosophila grimshawi]
Length = 356
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/314 (38%), Positives = 187/314 (59%), Gaps = 11/314 (3%)
Query: 25 SFHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIY---ASRKVDESNLTYP 81
H AARKGTR + KKV+ E+KKV + P +++ K I A + VD+S P
Sbjct: 23 CLHLTAVAEAARKGTREKARKKKVKVEVKKVGFIPHNQRDKKINVKRADKHVDDSWKQVP 82
Query: 82 EDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDP 141
+DD+Y+ + Y+ ++ EA+ RETHHP+MYN+P A + +E++ +K +++D
Sbjct: 83 KDDVYVGRYYRWPVYTVAEAIQCHRETHHPSMYNVPNAPLNVEIELNMQG-EKATRFVDN 141
Query: 142 WTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
+ + + H F HGE+R II F +E A+ + G +LVG + IK I G + + +Q
Sbjct: 142 FQRMAMIPHKFHHGEERKIIVFTKGNEEIAEARGAGASLVGGVELIKDITGGELLLSDYQ 201
Query: 202 FVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFG 261
F+I +P ILA+L+ +RGL+K++ P KS+TLG +L + + GI YS KD +Q+FG
Sbjct: 202 FIIAHPNILAELVALRGLMKRKFPNPKSETLGTNLAEMIVKFSNGIAYSAAKDEYQQNFG 261
Query: 262 YSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD- 320
+G LDM + LE+N++ +L D++TM+P D FITR+LL S PS E+ K+D
Sbjct: 262 LITASVGTLDMDAQHLEENVRFLLQDVNTMRP---KRDGRFITRVLLKSAPSSEQLKIDP 318
Query: 321 ---LSGLIEKPKAK 331
+S L +K AK
Sbjct: 319 FVYISELYDKSAAK 332
>gi|195330752|ref|XP_002032067.1| GM23720 [Drosophila sechellia]
gi|194121010|gb|EDW43053.1| GM23720 [Drosophila sechellia]
Length = 354
Score = 207 bits (527), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 125/352 (35%), Positives = 204/352 (57%), Gaps = 17/352 (4%)
Query: 1 MSVLRSLIFSSSVPRKVFSISEVVSFHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPD 60
+S +R+L S ++ + H + AARKGTR + KKV+ E+KKV + P
Sbjct: 5 LSSMRALALRQS------TVEPLRLLHLSAVSEAARKGTREKARKKKVKVEVKKVGFIPH 58
Query: 61 SKKKKDIY---ASRKVDESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLP 117
+++ K I A + VD+S P+DD Y+ + Y+ ++ QEA+ RETHHP+MYN+P
Sbjct: 59 NQRNKKINVKRADKHVDDSWKQVPKDDCYVGRYYRWPVYSVQEAIQCHRETHHPSMYNVP 118
Query: 118 RAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMG 177
A + +E++ +K +++D + + + H FDHGE+R II F + + ++ G
Sbjct: 119 NAPLNLNIELNMQA-EKITRFVDNFQRMAMIPHKFDHGEERKIIVFTKGNNEVLEAREAG 177
Query: 178 VALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLI 237
+LVG + IK I G + + +Q+VI +P ILA+L+ +RGL+K++ P KS+TLG +L
Sbjct: 178 ASLVGGVELIKDITSGELLLSDYQYVIAHPNILAELVALRGLMKRKFPNPKSETLGTNLA 237
Query: 238 GIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKP 297
+ + +GI YS KD +Q+FG +G LDM ++LE+N++ +L D++TM+P
Sbjct: 238 EMIVKFSSGISYSAVKDEYQQNFGLITASVGTLDMDVQKLEENIRFLLQDVNTMRP---K 294
Query: 298 EDEDFITRILLWSEPSPEKFKLD----LSGLIEKPKAKELDTGEEIDDEPKE 345
+ FITR+LL S PS E+ K+D + + +K AK G + EP E
Sbjct: 295 REGRFITRVLLKSPPSSEQLKIDPFLYVPEMWDKSTAKVKRDGAKKQTEPAE 346
>gi|125775173|ref|XP_001358838.1| GA20391 [Drosophila pseudoobscura pseudoobscura]
gi|54638579|gb|EAL27981.1| GA20391 [Drosophila pseudoobscura pseudoobscura]
Length = 354
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 181/298 (60%), Gaps = 7/298 (2%)
Query: 26 FHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIY---ASRKVDESNLTYPE 82
H AARKGTR + KKV+ E+KKV + P +++ K + A + VD+S +
Sbjct: 24 LHLTAISEAARKGTREKARKKKVKVEVKKVGFIPHNQRDKKVNVKRADKHVDDSWKQVSK 83
Query: 83 DDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPW 142
DD+Y+ + Y+ ++ EA+ RETHHP+MYN+P A + +E++ +K +++D +
Sbjct: 84 DDVYVGRYYRWPVYSVAEAIQCHRETHHPSMYNVPNAPLNVEIELNMQG-EKATRFVDNF 142
Query: 143 THIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+ + H F+HGE+R II F ++ + ++ G +LVG + IK I G + + +QF
Sbjct: 143 QRMAMIPHKFEHGEERKIIVFTKGNDEILEAREAGASLVGGVELIKDITGGELLLSDYQF 202
Query: 203 VICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
+I +P IL +L+ +RGL+K++ P KS+TLG +L + + +GI YS KD +Q+FG
Sbjct: 203 IIAHPNILPELVALRGLMKRKFPNPKSETLGTNLAEMIVKFSSGISYSATKDEYQQNFGL 262
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
+G LDM ++LE+NLK +L DI+TM+P + FITR+LL S PS E+ K+D
Sbjct: 263 ISASVGPLDMDAQKLEENLKHLLQDINTMRP---KREGKFITRVLLKSPPSSEQLKID 317
>gi|158301687|ref|XP_321348.3| AGAP001738-PA [Anopheles gambiae str. PEST]
gi|157012593|gb|EAA00834.3| AGAP001738-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 118/300 (39%), Positives = 181/300 (60%), Gaps = 9/300 (3%)
Query: 26 FHTATPYYAARKGTRARKEGKKVRTEIKKVAWT-PDSKKKKDI---YASRKVDESNLTYP 81
HTAT AARKGTR + KV+ ++KV + D +KK + A++ +D+S P
Sbjct: 25 LHTATLDLAARKGTREKARKAKVKKVVEKVGFIRHDLRKKGKLNLNVANKHIDDSWKQEP 84
Query: 82 EDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDP 141
+DD ++ K YK R++ +EA+ RETHHPT+YNLP A + A VE++ +K +++D
Sbjct: 85 KDDCWVSKYYKWRVYTVEEAIQCHRETHHPTVYNLPNAPLYAHVELNMQA-EKVTRFVDN 143
Query: 142 WTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
+ +V + H F+HGE+R+II F + + +D G LVG + IK I+ G + + +
Sbjct: 144 FQRMVAIPHRFEHGENRNIIVFAKGQDPLKEAKDAGATLVGGMELIKEIQNGDLQLSEYP 203
Query: 202 FVICNPKILADLMRIRGLLKK-RIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
FV+ +P IL +L+ IRGLLKK + P +S TLGV+L + ++ GI YS KD Q++DF
Sbjct: 204 FVLAHPNILPELVVIRGLLKKNKFPNPRSGTLGVNLAEMIQKYAHGINYSAAKDEQQKDF 263
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
G IG L M + LE NL +L D+++M+P + F+TR+LL S PS E K++
Sbjct: 264 GSIVACIGTLQMEAKHLESNLTALLQDVNSMRP---KREGRFVTRVLLKSPPSGENLKIN 320
>gi|195144844|ref|XP_002013406.1| GL23426 [Drosophila persimilis]
gi|194102349|gb|EDW24392.1| GL23426 [Drosophila persimilis]
Length = 354
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 112/298 (37%), Positives = 180/298 (60%), Gaps = 7/298 (2%)
Query: 26 FHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIY---ASRKVDESNLTYPE 82
H AARKGTR + KKV+ E+KKV + P +++ K + A + VD+S +
Sbjct: 24 LHLTAISEAARKGTREKARKKKVKVEVKKVGFIPHNQRDKKVNVKRADKHVDDSWKQVSK 83
Query: 83 DDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPW 142
DD+Y+ + Y+ ++ EA+ RETHHP+MYN+P A + +E++ +K +++D +
Sbjct: 84 DDVYVGRYYRWPVYSVAEAIQCHRETHHPSMYNVPNAPLNVEIELNMQG-EKATRFVDNF 142
Query: 143 THIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+ + H F+HGE+R II F ++ + + G +LVG + IK I G + + +QF
Sbjct: 143 QRMAMIPHKFEHGEERKIIVFTKGNDEILEARQAGASLVGGVELIKDITGGELLLSDYQF 202
Query: 203 VICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
+I +P IL +L+ +RGL+K++ P KS+TLG +L + + +GI YS KD +Q+FG
Sbjct: 203 IIAHPNILPELVALRGLMKRKFPNPKSETLGANLAEMIIKFSSGISYSATKDEYQQNFGL 262
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
+G LDM ++LE+NLK +L DI+TM+P + FITR+LL S PS E+ K+D
Sbjct: 263 ISASVGPLDMDAQKLEENLKHLLQDINTMRP---KREGKFITRVLLKSPPSSEQLKID 317
>gi|194744187|ref|XP_001954576.1| GF18339 [Drosophila ananassae]
gi|190627613|gb|EDV43137.1| GF18339 [Drosophila ananassae]
Length = 355
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 181/298 (60%), Gaps = 7/298 (2%)
Query: 26 FHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIY---ASRKVDESNLTYPE 82
H + AARKGTR + KKV+ E+KKV + P +++ K I A + VD+S P+
Sbjct: 24 LHLSAVNEAARKGTREKARKKKVKVEVKKVGFIPHNQRNKKINVKRADKHVDDSWKQVPK 83
Query: 83 DDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPW 142
DD Y+ + Y+ ++ EA+ RETHHP+MYN+P A + +E++ +K +++D +
Sbjct: 84 DDCYVGRYYRWPVYSVAEAIQCHRETHHPSMYNVPTAPLNVDIELNMQG-EKATRFVDNF 142
Query: 143 THIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+ + H F+HGE+R II F + + ++ G +LVG + IK I G + + +Q+
Sbjct: 143 QRMAMIPHKFEHGEERKIIVFTKGNNEIVEAREAGASLVGGVELIKDITSGELLLSDYQY 202
Query: 203 VICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
+I +P IL +L+ +RGL+K++ P KS+TLG +L + + GI YS KD +Q+FG
Sbjct: 203 IIAHPNILPELVALRGLMKRKFPNPKSETLGANLAEMIVKFSNGISYSAAKDEYQQNFGL 262
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
+G LDM +++LE+N+K +L D+++M+P + FITR+LL S PS E+ K+D
Sbjct: 263 ITASVGTLDMDEQKLEENIKFLLQDVNSMRP---KREGRFITRVLLKSPPSSEQLKID 317
>gi|201023275|ref|NP_001128383.1| mitochondrial ribosomal protein L1 [Tribolium castaneum]
gi|270001080|gb|EEZ97527.1| hypothetical protein TcasGA2_TC011372 [Tribolium castaneum]
Length = 340
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 128/328 (39%), Positives = 187/328 (57%), Gaps = 12/328 (3%)
Query: 15 RKVFSISEVVS--FHTATPYYAARKGTRARKEGKKVRTEIKKVA-WTPDSKKKKDIYASR 71
R + SIS +S H YYAARKGTR RK KKV+ E+ + + P +++ K+ + +
Sbjct: 4 RLLTSISRFLSEPSHLQIRYYAARKGTRERKAKKKVKKEVVETPKFIPHNERNKEKFLAL 63
Query: 72 ----KVDES-NLTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVE 126
K D+S P DD+Y + Y+ EA+ RETHHP MYN P A + +E
Sbjct: 64 RPKLKYDDSWKQPPPSDDVYHVRYYQRPAMSLVEAIKNHRETHHPDMYNEPGASLLVRIE 123
Query: 127 ISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDT 186
++ +K +++D +T IV + F+HGE+R IIAF + + G L G D
Sbjct: 124 LNMQG-EKATRFVDDFTRIVPIPFKFEHGEERPIIAFAKTGSAQKEALNAGAQLAGGVDL 182
Query: 187 IKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTG 246
IK ++ G V++ F+FVI +P IL +L+ +RGL+K+R P K TL VDL +A+R G
Sbjct: 183 IKQVQNGAVSLQNFKFVIAHPDILPELVALRGLMKRRFPNPKMGTLDVDLGAVAERFVNG 242
Query: 247 IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRI 306
I Y+ KKD E+DFG + IG LDM E LE N ++ D+ +M+P + DFI+R
Sbjct: 243 ISYTAKKDEYEKDFGLIETVIGSLDMDVEHLEGNFGALVKDVYSMRPKRQ---GDFISRC 299
Query: 307 LLWSEPSPEKFKLDLSGLIEKPKAKELD 334
LL S PS EKFK++ G +E+ K +D
Sbjct: 300 LLVSPPSSEKFKVEYRGYVEEAPRKVVD 327
>gi|195444246|ref|XP_002069780.1| GK11393 [Drosophila willistoni]
gi|194165865|gb|EDW80766.1| GK11393 [Drosophila willistoni]
Length = 357
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/299 (36%), Positives = 176/299 (58%), Gaps = 7/299 (2%)
Query: 25 SFHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIY---ASRKVDESNLTYP 81
H AARKGTR + KKV+ E+KKV + P +++ I A + VD+S P
Sbjct: 23 CLHLTAVTEAARKGTREKARKKKVKVEVKKVGFIPHNQRDNKINVKRADKHVDDSWKQVP 82
Query: 82 EDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDP 141
+DD+Y+ + Y+ ++ EA+ RETHHP+MYN+P A + +E++ +K +++D
Sbjct: 83 KDDVYVGRYYRWTVYSVAEAIQCHRETHHPSMYNVPNAPLNVEIELNMQG-EKATRFVDN 141
Query: 142 WTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
+ + + H F HGE+R II F + + ++ G +LVG + IK I G + + +Q
Sbjct: 142 FQRMAMIPHKFAHGEERKIIVFTKGNNEIIEAREAGASLVGGVELIKDITAGELLLSDYQ 201
Query: 202 FVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFG 261
+ I +P ILA+L+ +RGL+K++ P KS+TLG +L + + GI YS KD +Q+FG
Sbjct: 202 YFIAHPNILAELIALRGLMKRKFPNPKSETLGTNLAEMITKFSNGISYSASKDEYQQNFG 261
Query: 262 YSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
+G LDM +QLE+N++ +L D+ TM+P + FI R+LL S PS E+ K+D
Sbjct: 262 LISACVGTLDMDGQQLEENIRYLLQDVDTMRP---KREGRFINRVLLKSPPSSEQLKID 317
>gi|312379376|gb|EFR25670.1| hypothetical protein AND_08792 [Anopheles darlingi]
Length = 849
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 116/298 (38%), Positives = 180/298 (60%), Gaps = 7/298 (2%)
Query: 26 FHTATPYYAARKGTRARKEGKKVRTEIKKVAWT-PDSKKKKDIYASRK-VDESNLTYPED 83
HT + AARKGTR + KV+ ++KV + D +KK ++ + K +D+S P+D
Sbjct: 25 LHTTSLDLAARKGTREKARKAKVKKVVEKVGFIRHDLRKKGNLSLTNKHIDDSWKQEPKD 84
Query: 84 DIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWT 143
+ ++ K YK R++ +EA+ RETHHPT+YNLP A + A +E++ +K +++D +
Sbjct: 85 NCWVSKYYKWRVYSVEEAVECHRETHHPTIYNLPNAPLFAHIELNMQA-EKVTRFVDNFQ 143
Query: 144 HIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFV 203
+V +EH F+HGE+R+II F E + + G +LVG + IK I+ G + + + FV
Sbjct: 144 RMVPIEHRFEHGENRNIIVFAKGQEPLQEAKAAGASLVGGLELIKEIQHGDLQLSQYPFV 203
Query: 204 ICNPKILADLMRIRGLLKK-RIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
+ +P IL +L+ IRGLLKK + P +S TLGV+L + R GI YS KD Q++D+G
Sbjct: 204 LAHPNILPELVAIRGLLKKNKFPNPRSGTLGVNLAEMINRYAHGISYSATKDEQQKDYGT 263
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
IG L M + LE NL +L D+++M+P + F+TR+LL S PS E K+D
Sbjct: 264 IVACIGMLPMDSKHLESNLIALLQDVNSMRP---KREGKFVTRVLLKSPPSGENLKID 318
>gi|157106853|ref|XP_001649513.1| mitochondrial ribosomal protein L1 [Aedes aegypti]
gi|108879746|gb|EAT43971.1| AAEL004643-PA [Aedes aegypti]
Length = 359
Score = 197 bits (502), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 122/322 (37%), Positives = 186/322 (57%), Gaps = 20/322 (6%)
Query: 4 LRSLIFSSSVPRKVFSISEVVSFHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPD--- 60
+RS++ +++ P TA AARKGTR + KV+ ++KV +
Sbjct: 14 VRSVLLTNARP-----------LQTAVVDLAARKGTREKARKAKVKKVVEKVGFIRHDMR 62
Query: 61 SKKKKDIYASRK-VDESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRA 119
+K K ++ + K +D+S P D+ ++ K YK R++ +EA+ RETHHPTM NLP A
Sbjct: 63 NKGKLNLNQTNKHIDDSWKQDPVDNCWVSKYYKWRVYTVEEAIQCHRETHHPTMINLPNA 122
Query: 120 FIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVA 179
+ A VE++ +K +++D + +V + H FDHGE+R+II F E + D G
Sbjct: 123 PLLAQVELNMQA-EKITRFVDNFQRMVAIPHKFDHGENRNIIVFAKGQENLKEASDAGAT 181
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKK-RIPTLKSQTLGVDLIG 238
LVG + IK I+ G + + + FV+ +P IL DL+ IRGLLK+ + P + TLGV+L
Sbjct: 182 LVGGVELIKEIQNGDLQVSEYPFVLAHPNILPDLVVIRGLLKRNKFPNPRQGTLGVELAE 241
Query: 239 IAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPE 298
+ KR GI+YS +KD ++D+G +G L M +QLE+NL +L DI+TM+P
Sbjct: 242 MVKRYSNGIQYSAEKDENQKDYGQIVACVGTLQMDAKQLEENLAILLKDINTMRP---KR 298
Query: 299 DEDFITRILLWSEPSPEKFKLD 320
+ FITR+LL S PS E K+D
Sbjct: 299 EGKFITRVLLKSPPSGEVLKID 320
>gi|170030568|ref|XP_001843160.1| 50S ribosomal protein L1 [Culex quinquefasciatus]
gi|167867836|gb|EDS31219.1| 50S ribosomal protein L1 [Culex quinquefasciatus]
Length = 358
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 114/321 (35%), Positives = 182/321 (56%), Gaps = 13/321 (4%)
Query: 9 FSSSVPRKVFSISEVVS----FHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPDSKKK 64
SSV ++ S S + + H + AARKGTR + KV+ ++KV + +
Sbjct: 4 LGSSVLSRLASPSALATNARLLHVSALDLAARKGTREKARKAKVKKVVEKVGFIRHDMRN 63
Query: 65 KDIY----ASRKVDESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAF 120
K ++ +D+S P D+ ++ K YK R++ +EA+ RETHHPTMYNLP A
Sbjct: 64 KGKLNLQQVNKHIDDSWKQTPTDNCWVSKYYKWRVYTVEEAIRCHRETHHPTMYNLPNAP 123
Query: 121 IGATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVAL 180
+ A +E++ +K ++++ + +V + + F+HGE+R+II F E + D G L
Sbjct: 124 LHAHIELNMQA-EKITRFVENFQRMVAIPNRFEHGENRNIIVFAKGQEALKEATDAGATL 182
Query: 181 VGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKK-RIPTLKSQTLGVDLIGI 239
VG + IK I+ G + + + FV+ +P IL DL+ IRGLLKK + P + TLG +L +
Sbjct: 183 VGGVELIKEIQNGDLQLSEYPFVLAHPNILPDLVVIRGLLKKSKFPNPRLGTLGTNLAEM 242
Query: 240 AKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPED 299
+R GI+YS ++D ++D+G +G L M ++LE NL +L D++TM+P +
Sbjct: 243 IERYSNGIQYSAERDENQKDYGTIRACVGTLQMDAQKLEQNLSILLQDVNTMRP---KRE 299
Query: 300 EDFITRILLWSEPSPEKFKLD 320
FITR+LL S PS E K+D
Sbjct: 300 GKFITRVLLKSPPSGESLKID 320
>gi|307175882|gb|EFN65697.1| 39S ribosomal protein L1, mitochondrial [Camponotus floridanus]
Length = 358
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 114/324 (35%), Positives = 176/324 (54%), Gaps = 16/324 (4%)
Query: 7 LIFSSSVPRKVFSISEVVSFHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKD 66
L FSS+ R V +S + YAARKGTR + KKV+ ++K+ + K++K
Sbjct: 11 LNFSSTYIRHVTCLSPIGFLQARN--YAARKGTREKARKKKVKVVVQKLGFMAH-KERKA 67
Query: 67 IYASRK---------VDESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLP 117
+++ ++ +D+S P D++++ + +K +I+ F+EA+ + RE HHPTMYNLP
Sbjct: 68 VFSDKRNKAKQGNIILDDSKKPDPLDNVWIGQFHKWKIYSFEEAIQSHREIHHPTMYNLP 127
Query: 118 RAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMG 177
A + A +E+ KK K++ +T I V HSFDHG+ R I+AFC E + G
Sbjct: 128 NALLNAFIELDMQG-SKKTKFVPAFTRIACVPHSFDHGQSRKILAFCKSPEVQQIARTAG 186
Query: 178 VALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLI 237
G + IK I+ G ++ + ++ P IL DL+ IRGL++K P+ K TL D+
Sbjct: 187 AQYAGGKELIKQIQSGEFSLKEYDIILSEPSILPDLLLIRGLMRKNFPSTKLGTLSPDMN 246
Query: 238 GIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKP 297
+ + TGIKY K Q +G D G LDM +QLE+N I+ D+ K
Sbjct: 247 MLVTKFLTGIKYMAKPQNLLQSYGTIDVTFGTLDMDIKQLEENFIAIIKDVDAAK---VR 303
Query: 298 EDEDFITRILLWSEPSPEKFKLDL 321
+ E FITRI + P+ EKFK++
Sbjct: 304 QSEPFITRIHILCPPTREKFKVNF 327
>gi|332022268|gb|EGI62583.1| 39S ribosomal protein L1, mitochondrial [Acromyrmex echinatior]
Length = 355
Score = 186 bits (473), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 170/304 (55%), Gaps = 10/304 (3%)
Query: 33 YAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIYASR------KVDESNLTYPEDDIY 86
YAARKGTR + KKV+ I+KV + P ++ K ++S + P D+++
Sbjct: 36 YAARKGTREKARKKKVKKVIEKVGFIPHDQRVKTTGVKTLELKDISPNDSKKSEPIDNVW 95
Query: 87 LQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIV 146
+ K +K +I+ F+EA+ RETHHPT+YNLP + A +E+ KK K++DP+T IV
Sbjct: 96 ISKYHKWKIYSFEEAVQNHRETHHPTIYNLPNEPVKAFLELDMQG-AKKTKFVDPFTRIV 154
Query: 147 EVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICN 206
+ H FDHG+ R ++ FC E + G VG IK I+ G +M + ++
Sbjct: 155 CLPHVFDHGQTRKLLVFCKSLEMEEIARGAGADYVGGKQLIKQIQNGQFSMKEYDIILSE 214
Query: 207 PKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
P IL DL+ IRGL++K+ P+ KS TLG DL + + TG++Y+ K + FG D
Sbjct: 215 PTILPDLLLIRGLMRKKFPSAKSGTLGTDLKTMVTKFLTGMRYTGKPHETLKSFGTVDVA 274
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLIE 326
G LDM +QLE+N I+ D++ ++ P +P FITR + PS EKFK+D +
Sbjct: 275 FGTLDMDTKQLEENFATIIKDVNKVR-PRRP--GPFITRARITCSPSSEKFKVDFEQYLS 331
Query: 327 KPKA 330
K K
Sbjct: 332 KDKV 335
>gi|321470662|gb|EFX81637.1| hypothetical protein DAPPUDRAFT_49875 [Daphnia pulex]
Length = 361
Score = 182 bits (463), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/289 (36%), Positives = 159/289 (55%), Gaps = 8/289 (2%)
Query: 33 YAARKGTRARKEGKKVRTE-IKKVAWTP---DSKKKKDIYASRKVDESNLTYPEDDIYLQ 88
YAARKGTR RK K + E +KK + P K R++ E N DD++
Sbjct: 31 YAARKGTRDRKTKKTSKAEKVKKEEFVPYKLKMAKASGPVGPRRMIELNKPEAIDDVFFT 90
Query: 89 KDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEV 148
+ + R F EA+ RET+HP++YN P A I VE+ QKK +YMD ++ IV +
Sbjct: 91 RHFMTRPISFAEAVQFQRETNHPSVYNSPEALISMKVELDMQL-QKKNRYMDNFSRIVVL 149
Query: 149 EHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
HSFD R ++AFC ET + G VG D IK I+ G V + + + I +
Sbjct: 150 PHSFDFQPIRKVLAFCKTQETQDEAVKAGADAVGGLDLIKRIQSGEVPLTDYDYFIAHTN 209
Query: 209 ILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIG 268
++AD++ +RGLLK+++P +K+ ++G+++ + + G+++S KD E D+G + G
Sbjct: 210 MMADVLPLRGLLKRKLPNVKNGSIGINMTKMVEIFSKGLEFSSTKDDNELDYGLVEIPFG 269
Query: 269 RLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKF 317
L M E+LE N IL DI + + +KP FITR + S PSPE+F
Sbjct: 270 NLTMPTEELEANFSAILKDIESCR--AKPFG-SFITRCYVLSPPSPERF 315
>gi|345486637|ref|XP_001605669.2| PREDICTED: 39S ribosomal protein L1, mitochondrial-like [Nasonia
vitripennis]
Length = 360
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 111/310 (35%), Positives = 176/310 (56%), Gaps = 9/310 (2%)
Query: 32 YYAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIYASRK----VDESNLTYPEDDIYL 87
+YAARKGTR + + KKV+ E+KK+ + ++ K I + +E DD++
Sbjct: 38 HYAARKGTREKAKKKKVKVEVKKLTFEEKVRRSKKINIIKPDAMITNEHTKPVAVDDVFY 97
Query: 88 QKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVE 147
+ ++ +++ F EA+ RE HPTMY+ P + + E++ T KK K + + IV
Sbjct: 98 MRYFRWKVYSFAEAIQNHREYFHPTMYDAPDSIVCVNAELNLTG-VKKTKPVGTFNKIVP 156
Query: 148 VEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNP 207
V+H FDHGE+R ++AFC E A D G L G SD IK I G +++ + V+ +P
Sbjct: 157 VKHHFDHGEERRLLAFCKAEEDVAAALDAGAVLAGGSDIIKLILSGEISIHNYDTVVAHP 216
Query: 208 KILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHI 267
++ +++ +RGLLKK+ P +K+ TLG+D+ I GIKY+ K ++G ++ I
Sbjct: 217 SMMPEVLTLRGLLKKKYPNIKNSTLGMDIKSIVHLHLHGIKYTAKPYEHFPEYGVAEVPI 276
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLI-E 326
G+L M E LEDNL+ + I + K P +P FITR+ + PS EKFK+D I E
Sbjct: 277 GKLSMETEHLEDNLRSAIDSILSAK-PKRP--GPFITRLRIICPPSLEKFKIDDKLYIEE 333
Query: 327 KPKAKELDTG 336
+P+ K+ + G
Sbjct: 334 EPEVKQTEKG 343
>gi|383857361|ref|XP_003704173.1| PREDICTED: 50S ribosomal protein L1-like [Megachile rotundata]
Length = 351
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/311 (33%), Positives = 173/311 (55%), Gaps = 8/311 (2%)
Query: 33 YAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIYASRK-VDESNLTYPEDDIYLQKDY 91
YAARKGTR + KK++ ++K+ KKKK + +D+S+L DD+++ K++
Sbjct: 40 YAARKGTREKARQKKIKMNLEKIGHEARKKKKKATQSPLLLIDDSSLKPIMDDVWIIKNH 99
Query: 92 KLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHS 151
++ QEA+ RETHHPTM+N+P A + A +E + HQ K KY+D ++ +++ H
Sbjct: 100 PQPVYSLQEAIEYHRETHHPTMFNVPNALVNAFIECNMK-HQNKNKYVDKFSKNIDMPHV 158
Query: 152 FDHGEDR-SIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKIL 210
FD G+ + +++A + G VG ++ IK I+ G + + VI + IL
Sbjct: 159 FDTGKKKLTVLALAKNSKQQDNAVKAGAEYVGGTEVIKQIQGGKFDIKEYDTVIAHIDIL 218
Query: 211 ADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+L+ IRGLLK++ P++K+ TL D+ + +++ I+Y + + + +D+ + G+L
Sbjct: 219 TELLLIRGLLKRKFPSVKAGTLSNDIGSLITKMKNSIRYYTEVNEEHKDYAKINLPFGKL 278
Query: 271 DMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLIEKPKA 330
DM LE+N ++ DI ++ FI RI + SEPS E FK+D S + PK
Sbjct: 279 DMDIAHLEENFATVVKDIESV---GASRTGSFIKRIQISSEPSEELFKVDYSKFL--PKK 333
Query: 331 KELDTGEEIDD 341
DT +E DD
Sbjct: 334 AGEDTEQEPDD 344
>gi|110768302|ref|XP_001120018.1| PREDICTED: 50S ribosomal protein L1 [Apis mellifera]
Length = 351
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/301 (32%), Positives = 164/301 (54%), Gaps = 12/301 (3%)
Query: 33 YAARKGTR----ARKEGKKVRTEIKKVAWTPDSKKKK----DIYASRKVDESNLTYPEDD 84
YAARKGTR K+ + + +++V + P ++KK +I +D+S DD
Sbjct: 33 YAARKGTREKRLLAKKKRAKKVVVEQVGFVPYKQQKKKTKVEICPLNNIDDSWKWKAVDD 92
Query: 85 IYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTH 144
+++ K ++ I+ FQEA+ RETHHPTMYN P A + A ++++ +KK +++D +T
Sbjct: 93 VWIVKYHQQPIYSFQEAIECHRETHHPTMYNKPNAIVNAFIQLNMR-REKKNRFVDKFTR 151
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVI 204
IV+ H F++ R+++AF E + ++ G G + IK I+ G + FV+
Sbjct: 152 IVDTPHIFEYNNKRTVLAFSQNLEEQEEARNAGADYSGGIELIKKIQNGTFQFKEYDFVV 211
Query: 205 CNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSD 264
+ IL+DL+ +RGLLKK+ P ++ LG D+ + + + GI Y+ +++G +
Sbjct: 212 AHANILSDLLLVRGLLKKKFPNMRIGNLGTDMNKLVTKFKNGIGYAAIPHKTFKEYGEIN 271
Query: 265 FHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGL 324
G LDM+ + LE+N ++ DI MKP D FI RI + SE S E F ++
Sbjct: 272 VAFGSLDMNMKYLEENFCALINDIELMKP---QRDASFIVRIQIRSELSDESFTINYQDY 328
Query: 325 I 325
I
Sbjct: 329 I 329
>gi|340725249|ref|XP_003400985.1| PREDICTED: 39S ribosomal protein L1, mitochondrial-like [Bombus
terrestris]
Length = 352
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 179/319 (56%), Gaps = 15/319 (4%)
Query: 33 YAARKGTRAR----KEGKKVRTEIKKVAWTPDSKKKKD----IYASRKVDESNLTYPEDD 84
YAARKGTR R + KKV+ +++V + P ++KK+ + ++ES DD
Sbjct: 33 YAARKGTRERWRLKLKKKKVKAVVEQVGFVPHKQRKKETKVEVCPLTTMNESWKWKAVDD 92
Query: 85 IYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTH 144
+Y+ K ++ ++ +EA+ RETHHPT+ N P A + A +E++ +KK +Y+D +T
Sbjct: 93 VYIVKYHQRPVYSLKEAIENHRETHHPTILNKPNAVVNAFIELNMR-REKKNRYLDKFTR 151
Query: 145 IVEVEHSFDHGE-DRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFV 203
I++ H F +G+ R+++AFC + ++ G LVG + IK I+ G + +
Sbjct: 152 IIDTPHIFTYGQPQRTVLAFCKNPQEQENAKNAGADLVGGIELIKKIQNGTFAFKEYDCI 211
Query: 204 ICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYS 263
+ + IL DL+ +RGLLKKR P L++ TLG D+ + +R + GI Y+ + +++G
Sbjct: 212 VAHADILTDLLLVRGLLKKRFPNLRAGTLGNDMSQLVRRYKDGIGYTAEPHKSFKEYGQI 271
Query: 264 DFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSG 323
+ G L+M ++LE+N ++ D+ +M+P D FI R+ + SE S E FK++
Sbjct: 272 NVTFGLLNMDTQELEENFSSLINDVESMRP---KRDGLFIERVQISSELSKESFKINHQD 328
Query: 324 LIEKPKAKELDTGEEIDDE 342
+ + E +T E+ DE
Sbjct: 329 YL--ATSNEEETKEQEQDE 345
>gi|380016359|ref|XP_003692154.1| PREDICTED: 39S ribosomal protein L1, mitochondrial-like [Apis
florea]
Length = 351
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/324 (33%), Positives = 174/324 (53%), Gaps = 16/324 (4%)
Query: 28 TATPYYAARKGTR-----ARKEGKKVRTEIKKVAWTPDSKKKK----DIYASRKVDESNL 78
T T YAARKGTR A+K+ K + +++V + P + KK ++ +D+S
Sbjct: 27 TQTRDYAARKGTREKRLLAKKKRAKKQVTVEQVGYVPYKQHKKQKIKEVCPLNTIDDSWK 86
Query: 79 TYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKY 138
D++++ K ++ I+ QEA+ RETHHPTMYN P A + A VE+ +KK ++
Sbjct: 87 WKAIDNVWIVKYHQRPIYSLQEAIECHRETHHPTMYNKPNAIVNAFVELDMR-REKKNRF 145
Query: 139 MDPWTHIVEVEHSFDH-GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTM 197
+D +T IV+ H F++ G R+++AF E + +D G G ++ IK I+ G
Sbjct: 146 VDKFTRIVDTPHIFENSGNKRTVLAFSKNLEEQEKARDAGADYSGGTELIKKIQNGTFQF 205
Query: 198 PTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQE 257
+ FV+ + IL+DL+ IRGLLKK+ P ++ +LG D+ + + + GI Y+
Sbjct: 206 KDYDFVVAHANILSDLLLIRGLLKKKFPNIRIGSLGTDMNKLVTKFKNGIGYTAIPHKTF 265
Query: 258 QDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKF 317
+++G + G LDM + LE N ++ DI M +P D FI RI + SE S E F
Sbjct: 266 KEYGEINVAFGLLDMDMKYLEANFHALINDIEVM----RPRDASFIVRIQIRSELSDESF 321
Query: 318 KLDLSGLIEKPKAKELDTGEEIDD 341
++ + KE + EEID+
Sbjct: 322 TINYQDYVATKTDKETNK-EEIDE 344
>gi|307191984|gb|EFN75374.1| 39S ribosomal protein L1, mitochondrial [Harpegnathos saltator]
Length = 329
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/239 (35%), Positives = 141/239 (58%), Gaps = 4/239 (1%)
Query: 83 DDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPW 142
D++++ +K +++ F+EA+ RE HHPTM+N P AFI A +E+ KK K+++ +
Sbjct: 59 DNVWIINQHKWKVYSFEEAVQVHREMHHPTMHNSPNAFIKAFIELDMQG-VKKTKFVETF 117
Query: 143 THIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+ I + + F+HG+ R I+AFC E +D G L G + IK ++G+ ++ +
Sbjct: 118 SKIACIPNKFEHGQVRKILAFCKSPEMQDLARDTGAHLCGGKELIKQAQQGVFSVKEYDI 177
Query: 203 VICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
+I P +L DL+ IRG+LK++ P+ K TLG D+ + + G+KY++K + +G
Sbjct: 178 IISEPSLLPDLLLIRGILKRKFPSTKLGTLGNDINALVMKFLNGVKYTVKPHDLLKSYGT 237
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDL 321
+D G L+M +QLE+NL ++ DI+ K P +P FITR+ L S P PE K++
Sbjct: 238 TDVIFGTLNMDVKQLEENLAAVITDINDAK-PHRP--GPFITRVRLMSLPLPEMCKIEF 293
>gi|350404151|ref|XP_003487019.1| PREDICTED: 39S ribosomal protein L1, mitochondrial-like [Bombus
impatiens]
Length = 352
Score = 163 bits (413), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 177/319 (55%), Gaps = 15/319 (4%)
Query: 33 YAARKGTRARKEGKKVRTEIKKV----AWTPDSKKKKD----IYASRKVDESNLTYPEDD 84
YAARKGTR ++ K + ++K V + P ++KKD + ++ES DD
Sbjct: 33 YAARKGTREKRRLKLRKKKVKAVVEQVGFIPHKQRKKDTKVEVCPLTTINESWKWKAVDD 92
Query: 85 IYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTH 144
+YL K ++ ++ +EA+ RETHHPTM+N P A + A +E++ +KK +++D +T
Sbjct: 93 VYLVKYHQQPVYSLKEAIENHRETHHPTMFNKPNAVVNAFIELNMR-REKKNRFLDRFTR 151
Query: 145 IVEVEHSFDHGED-RSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFV 203
I+ H F +GE+ R+++AF + ++ G LVG + IK I+ G + +
Sbjct: 152 IINTPHIFTYGENKRTVLAFSKNLQEQEDAKNAGADLVGGVELIKRIQNGTFAFKEYDCI 211
Query: 204 ICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYS 263
+ + IL DL+ +RGLLKKR P L++ TLG ++ + ++ + GI Y+ + +++G
Sbjct: 212 VAHADILTDLLLVRGLLKKRFPNLRTGTLGNNMSQLVRKYKDGISYTAEPHNSFKEYGQI 271
Query: 264 DFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSG 323
+ G L+M+ ++LE+N ++ D+ +M+P D FI R+ + SE S E FK++
Sbjct: 272 NVAFGLLNMNTQELEENFSSLINDVESMRP---KRDGLFIERVQISSELSKELFKINYQD 328
Query: 324 LIEKPKAKELDTGEEIDDE 342
+ +E T E+ DE
Sbjct: 329 YLATSNKEE--TKEQEQDE 345
>gi|242023769|ref|XP_002432303.1| 50S ribosomal protein L1, putative [Pediculus humanus corporis]
gi|212517726|gb|EEB19565.1| 50S ribosomal protein L1, putative [Pediculus humanus corporis]
Length = 376
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 98/351 (27%), Positives = 174/351 (49%), Gaps = 23/351 (6%)
Query: 7 LIFSSSVPRKVFSISEVVSFHTAT--PYYAARKGTRARKEGKKVRTEIKKVAWTPDSKKK 64
L+F+++ P +F S +V + +AARKG R + + + +I+K+A ++KK
Sbjct: 9 LVFNATKP--LFDCSWMVVPNNLNLQKRFAARKGYRQKALQLQKKRKIEKLANEKETKKP 66
Query: 65 KDIYASRKVDESNLTY---------PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYN 115
AS +N+T P DDI++++++K + + EA+ RE HHPT++N
Sbjct: 67 SKTNASF----TNVTVTEERNKPEIPTDDIFIEEEFKYKKYSIVEAVDNHREFHHPTVFN 122
Query: 116 LPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQD 175
P A + ++E T + K K++ + I + H + + I+ FC+ ++ ++
Sbjct: 123 NPYADVKVSIEFDMTKNPKGTKFLKSFQGIAAIPHPINQELKKDILVFCNSNKVQEAVES 182
Query: 176 MGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVD 235
G G + + ++ G V + ++F++C +L IR +LK R+P K+ TL D
Sbjct: 183 -GATTAGATSLVNKVKDGDVQISIYEFILCEKDFFPELTLIRNILKTRMPRAKAGTLTDD 241
Query: 236 LIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
L R + GI+YS K ++FG + IG L M ++E+N +L D+ KP
Sbjct: 242 LPSAIHRFKHGIQYSCTKPLSLENFGRMECIIGNLAMESNKIEENFIHLLKDVMNHKP-- 299
Query: 296 KPEDEDFITRILLWSEPSPEKFKLDLSGLI--EKPKAKELDTGEEIDDEPK 344
D DFI I S PS EKF +D++ + + K+K ++ D K
Sbjct: 300 -KRDGDFIKWIWCTSPPSNEKFSIDVTKYVKDDNLKSKSTESNRNFKDSNK 349
>gi|346466545|gb|AEO33117.1| hypothetical protein [Amblyomma maculatum]
Length = 378
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 95/299 (31%), Positives = 156/299 (52%), Gaps = 15/299 (5%)
Query: 34 AARKGTRARKEGKKVRTEIKKVAWTPDSKK-----KKDIYASRKVDESNLTYPEDDIYLQ 88
AA+K R RK K E K+AW SK +++ Y R+ D P DD+Y
Sbjct: 74 AAQKRNRQRKLEKP--PEKDKLAWMKKSKNLLLGPRRETYEDREKDP-----PVDDVYFT 126
Query: 89 KDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEV 148
Y ++ EA+A RETHHPT++ P AF+ +E++ +T +KK K+ + ++ V
Sbjct: 127 DKYMPIVYPAAEAVAMHRETHHPTVFGDPDAFLYTFIELNLST-KKKTKFREDFSGTVIY 185
Query: 149 EHSFDHGE-DRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNP 207
H F + ++ IIA C + A + + G + G + IK I G + F +++ +
Sbjct: 186 NHPFTLTKREKRIIALCKNTDVATESLEAGAEIAGGTPLIKRILAGELDTKHFDYILAHV 245
Query: 208 KILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHI 267
I+ DL ++RGLLK ++P+ + + DL + + GI +S K D QE D+G+ + +
Sbjct: 246 DIIQDLPQLRGLLKTKLPSAANGRVTNDLPSLVRGYFKGIDFSSKSDQQELDYGFVEVPV 305
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLIE 326
G+L M E L DN+K +L +I KP FIT++ L P+ EKF++ S ++
Sbjct: 306 GQLSMPTEHLTDNIKTLLINIDLFKPKGTSPGT-FITKVELKCPPTVEKFQIACSEFLD 363
>gi|427797473|gb|JAA64188.1| Putative ribosomal protein l1, partial [Rhipicephalus pulchellus]
Length = 361
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/295 (31%), Positives = 153/295 (51%), Gaps = 8/295 (2%)
Query: 34 AARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIYASRKVDESNLTYPE-DDIYLQKDYK 92
AA+K R RK K E K+AW +K I R+ E L P DD++ Y
Sbjct: 58 AAQKRNRQRKLEKP--PEKDKLAWM--KSRKLLIGPRRETYEDRLKEPPIDDVFFTDKYM 113
Query: 93 LRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSF 152
++ +A+A RETHHPT+ + P A + A VE+S T +KK K+ + ++ V H F
Sbjct: 114 PVVYPAADAIAMHRETHHPTVLDDPDALLYAFVELSLKT-KKKTKFREDFSGTVLYNHPF 172
Query: 153 D-HGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
++ IIA C + A + G + G + IK I G + F +++ + I+
Sbjct: 173 SITKREKRIIALCKNTDMATEALAAGAEVAGGTTVIKRILAGELDTKLFDYILAHVDIVQ 232
Query: 212 DLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLD 271
DL ++RGLLK ++PTL + + +L G+ + G+ ++ K D QE D+G+ + +G+L
Sbjct: 233 DLPQLRGLLKTKLPTLANGKVTNNLPGLVQGYFKGVDFASKSDQQELDYGFVEVPVGKLS 292
Query: 272 MSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLIE 326
M E L DN++ +L I KP + + FIT++ L P+ EKF + S ++
Sbjct: 293 MPTEHLIDNIRTLLLCIDGFKPKTT-DPGTFITKVELKCPPTAEKFIIACSEFLD 346
>gi|7500404|pir||T32555 hypothetical protein F33D4.5 - Caenorhabditis elegans
Length = 392
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 133/256 (51%), Gaps = 5/256 (1%)
Query: 74 DESNLT-YPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTH 132
DE+NL P D++++ +K + + EAL RE P++YN P A I +E++ TT
Sbjct: 104 DEANLPEKPTLDVFIKSHFKTQYYTVSEALDMHRELQSPSIYNNPNAPIRLRLELNMTT- 162
Query: 133 QKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIER 192
+++ K + IV V H F+H E R+I+AF + + + G + DTIK I +
Sbjct: 163 ERQTKMVTGSDEIVPVPHPFNHNEKRTILAFANDVKLQELAVESGAEMALGQDTIKKIIK 222
Query: 193 GLVTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMK 252
G + F + + + + ++ +RG+LK R PT + LG +L + ++ + G+K ++K
Sbjct: 223 GQFRTDDYDFCVSHSDMGSSILPLRGILKMRFPTRANGGLGENLPELIEKFKNGVKLNIK 282
Query: 253 KDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEP 312
DP +G SD +GRL M E +E N+ ++A + P+ F+ R LL + P
Sbjct: 283 GDPVYPIWGLSDCVVGRLSMPNEHIEANIATVIAAACAHRNPAL---GSFVNRALLMTIP 339
Query: 313 SPEKFKLDLSGLIEKP 328
E + +D+ I P
Sbjct: 340 GEENYAIDVKPWIPIP 355
>gi|17540136|ref|NP_501257.1| Protein F33D4.5 [Caenorhabditis elegans]
gi|351065011|emb|CCD63770.1| Protein F33D4.5 [Caenorhabditis elegans]
Length = 377
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 133/256 (51%), Gaps = 5/256 (1%)
Query: 74 DESNLT-YPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTH 132
DE+NL P D++++ +K + + EAL RE P++YN P A I +E++ TT
Sbjct: 89 DEANLPEKPTLDVFIKSHFKTQYYTVSEALDMHRELQSPSIYNNPNAPIRLRLELNMTT- 147
Query: 133 QKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIER 192
+++ K + IV V H F+H E R+I+AF + + + G + DTIK I +
Sbjct: 148 ERQTKMVTGSDEIVPVPHPFNHNEKRTILAFANDVKLQELAVESGAEMALGQDTIKKIIK 207
Query: 193 GLVTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMK 252
G + F + + + + ++ +RG+LK R PT + LG +L + ++ + G+K ++K
Sbjct: 208 GQFRTDDYDFCVSHSDMGSSILPLRGILKMRFPTRANGGLGENLPELIEKFKNGVKLNIK 267
Query: 253 KDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEP 312
DP +G SD +GRL M E +E N+ ++A + P+ F+ R LL + P
Sbjct: 268 GDPVYPIWGLSDCVVGRLSMPNEHIEANIATVIAAACAHRNPAL---GSFVNRALLMTIP 324
Query: 313 SPEKFKLDLSGLIEKP 328
E + +D+ I P
Sbjct: 325 GEENYAIDVKPWIPIP 340
>gi|442758137|gb|JAA71227.1| Putative ribosomal protein l1 [Ixodes ricinus]
Length = 380
Score = 129 bits (324), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 129/247 (52%), Gaps = 3/247 (1%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
P DD+Y + + ++ +A+ RE+HHPT+ + AF+ A VE+ +T +KK +Y D
Sbjct: 106 PVDDVYFLESFVPPVYAAVDAIEMHRESHHPTVLDDADAFLYAFVELDLST-KKKNRYRD 164
Query: 141 PWTHIVEVEHSFDHGE-DRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPT 199
+ V H F+ + + I+A C + A + + G + G S IK I G +
Sbjct: 165 SFAGTVLFNHGFEFTKRQKRILALCKNTDLATEALEAGAEVAGGSSVIKRILIGELDTKR 224
Query: 200 FQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQD 259
F V+ + I+ADL ++RGLLK ++P+ + T+ DL + K G+ + D E D
Sbjct: 225 FDHVLAHVDIMADLPQLRGLLKTKLPSAANGTVANDLNSLVKSYLKGVDFVSNSDSHELD 284
Query: 260 FGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKL 319
+G+ + +GRL M E L +N++ +L + KP + FIT++ L P+ EKF +
Sbjct: 285 YGFLEVPVGRLSMPTEHLINNIRTLLETVDGFKPKNT-NPGTFITKVELKCPPTDEKFAI 343
Query: 320 DLSGLIE 326
S +E
Sbjct: 344 ASSEFLE 350
>gi|308491166|ref|XP_003107774.1| hypothetical protein CRE_12735 [Caenorhabditis remanei]
gi|308249721|gb|EFO93673.1| hypothetical protein CRE_12735 [Caenorhabditis remanei]
Length = 377
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 134/256 (52%), Gaps = 5/256 (1%)
Query: 74 DESNLT-YPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTH 132
DE NL P D++++ +K++ + EAL RE P++YN P A I +E++ TT
Sbjct: 89 DEVNLPEKPTLDVFIKSHFKIQYYTVAEALDMHRELQSPSIYNNPNAPIRLRLELNMTT- 147
Query: 133 QKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIER 192
+++ K + IV V F+H E R+I+AF + + + G + DTIK I +
Sbjct: 148 ERQTKMVTGSDEIVPVPFPFNHNEKRTILAFANDLKLQELAVESGAEMALGQDTIKKIIK 207
Query: 193 GLVTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMK 252
G + F + + + + ++ +RG+LK R PT + LG +L + ++ + G+K ++K
Sbjct: 208 GQFRTDDYDFCVSHSDMGSSILPLRGILKTRFPTRANGGLGENLPELIEKFKNGVKLNIK 267
Query: 253 KDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEP 312
DP +G SD +GRL MS EQ+E N+ +++ + P+ FI R LL + P
Sbjct: 268 GDPVYPIWGLSDCVVGRLSMSNEQIEANIATVVSAACAHRNPAL---GPFINRALLMTVP 324
Query: 313 SPEKFKLDLSGLIEKP 328
E + +D+ + P
Sbjct: 325 GEENYAIDVKPWLPVP 340
>gi|268536174|ref|XP_002633222.1| Hypothetical protein CBG05941 [Caenorhabditis briggsae]
Length = 378
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 78/256 (30%), Positives = 133/256 (51%), Gaps = 5/256 (1%)
Query: 74 DESNLT-YPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTH 132
DESNL P D++++ +K + + EAL RE P++YN P A I +E++ TT
Sbjct: 89 DESNLPEKPTLDVFIKSHFKTQYYTVAEALDMHRELQSPSIYNNPNAPIRLRLELNMTT- 147
Query: 133 QKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIER 192
+K+ K + IV V F+H E R+I+AF + + + G + DTIK I +
Sbjct: 148 EKQTKMITGSDEIVPVPFPFNHNEKRTILAFANDVKLQELAVESGAEMALGQDTIKKIIK 207
Query: 193 GLVTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMK 252
G + F + + + + ++ +RG+LK R PT + LG +L + ++ + G+K ++
Sbjct: 208 GQFRTDDYDFCVSHSDMGSSILPLRGILKTRFPTRANGGLGENLPELIEKFKNGVKLNIN 267
Query: 253 KDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEP 312
DP +G SD +GRL M EQ+E N+ ++A + + P+ FI R LL + P
Sbjct: 268 GDPVYPIWGLSDCVVGRLSMPNEQIEANIATVIAAACSHRNPAL---GPFINRALLMTIP 324
Query: 313 SPEKFKLDLSGLIEKP 328
E + +D+ + P
Sbjct: 325 GEENYAIDVKPWLPVP 340
>gi|402588258|gb|EJW82191.1| hypothetical protein WUBG_06898 [Wuchereria bancrofti]
Length = 388
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 129/254 (50%), Gaps = 4/254 (1%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
P +I+++ YK + + EAL RE P++YN P A I +E++ TT +KK K +
Sbjct: 109 PTTNIFIRSAYKTQYYSVSEALQMHREMQQPSIYNNPNAHIRLRMELNMTT-EKKTKMVA 167
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
+V + + F H E R+I+AF + + G + D IK I +G+ + +
Sbjct: 168 DSEELVPIPYPFKHNEKRTILAFAYEQHNRDAAVEAGAEIALGPDMIKKIIKGMFRIDDY 227
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + + + + ++ +RG+L+ R P + LG + I + + G+K S++ DP +
Sbjct: 228 DFCVAHTDMASSILPLRGILRSRFPNKINGGLGDNFQEIIGKFKNGVKLSIRGDPIMPIW 287
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
G D IGRL M+ ++L+ N++ ++ + + P+ FI R LL P F LD
Sbjct: 288 GLCDTIIGRLKMNDDELKANIRAVIEALCKHRNPAL---GPFINRALLMVIPGDAHFALD 344
Query: 321 LSGLIEKPKAKELD 334
++ + P +E++
Sbjct: 345 VNPFLPIPTEQEIE 358
>gi|393907395|gb|EFO23626.2| hypothetical protein LOAG_04857 [Loa loa]
Length = 387
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 125/254 (49%), Gaps = 4/254 (1%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
P +++++ YK + + EAL RE P++YN P A + +E++ TT +KK K +
Sbjct: 109 PTTNVFIRSAYKTQYYSVSEALRMHREMQQPSIYNNPNARVRLRMELNMTT-EKKTKMVA 167
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
+V + + F H E R+I+AF + + G + D IK I +G+ + +
Sbjct: 168 DSEELVPIPYPFKHNEKRTILAFAYEQHNRDMAVEAGAEIALGPDVIKKIIKGMFRIDDY 227
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + + + + ++ +RG+L+ R P + LG + I + + G+K +++ DP +
Sbjct: 228 DFCVAHTDMASSILPLRGILRSRFPNKINGGLGDNFQEIIDKFKNGVKLAIRGDPIMPIW 287
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
G D IGRL M +LE N I+A I + P FI R LL P F LD
Sbjct: 288 GLCDTVIGRLSMDDNELEAN---IVAVIEALCKHRNPALGPFINRALLMVIPGDAHFALD 344
Query: 321 LSGLIEKPKAKELD 334
++ + P KE++
Sbjct: 345 VNPFLPIPTEKEIE 358
>gi|170582800|ref|XP_001896293.1| L1P family of ribosomal proteins containing protein [Brugia malayi]
gi|158596540|gb|EDP34870.1| L1P family of ribosomal proteins containing protein [Brugia malayi]
Length = 389
Score = 121 bits (304), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 128/254 (50%), Gaps = 4/254 (1%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
P +I+++ YK + + EAL RE P++YN P A I +E++ TT ++K K +
Sbjct: 109 PTTNIFIRSAYKTQYYSVSEALQMHREMQQPSIYNNPNARIRLRMELNMTT-ERKTKMVA 167
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
+V + + F H E R+I+AF + + G + D IK I +G+ + +
Sbjct: 168 DSEELVPIPYPFKHNEKRTILAFAYEQHNRDAAVEAGAEIALGPDMIKKIIKGMFRIDDY 227
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + + + + ++ +RG+L+ R P + LG D I + + GIK S++ DP +
Sbjct: 228 DFCVAHTDMASSILPLRGILRSRFPNKINGGLGDDFQEIIGKFKNGIKLSIRGDPIMPVW 287
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
G D IGRL M+ ++L+ N+ ++ + + P+ FI R L+ P F LD
Sbjct: 288 GLCDTVIGRLAMNDDELKANIAAVIEALCKHRNPAL---GPFINRALIMVIPGDAHFALD 344
Query: 321 LSGLIEKPKAKELD 334
++ + P +E++
Sbjct: 345 VNPFLPIPTEQEIE 358
>gi|312075495|ref|XP_003140442.1| hypothetical protein LOAG_04857 [Loa loa]
Length = 357
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 126/259 (48%), Gaps = 9/259 (3%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
P +++++ YK + + EAL RE P++YN P A + +E++ TT +KK K +
Sbjct: 74 PTTNVFIRSAYKTQYYSVSEALRMHREMQQPSIYNNPNARVRLRMELNMTT-EKKTKMVA 132
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
+V + + F H E R+I+AF + + G + D IK I +G+ + +
Sbjct: 133 DSEELVPIPYPFKHNEKRTILAFAYEQHNRDMAVEAGAEIALGPDVIKKIIKGMFRIDDY 192
Query: 201 QFVICNPKILADLMRIRGLLKKRIPT-----LKSQTLGVDLIGIAKRLQTGIKYSMKKDP 255
F + + + + ++ +RG+L+ R P L S LG + I + + G+K +++ DP
Sbjct: 193 DFCVAHTDMASSILPLRGILRSRFPNKINERLSSGGLGDNFQEIIDKFKNGVKLAIRGDP 252
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPE 315
+G D IGRL M +LE N I+A I + P FI R LL P
Sbjct: 253 IMPIWGLCDTVIGRLSMDDNELEAN---IVAVIEALCKHRNPALGPFINRALLMVIPGDA 309
Query: 316 KFKLDLSGLIEKPKAKELD 334
F LD++ + P KE++
Sbjct: 310 HFALDVNPFLPIPTEKEIE 328
>gi|391330962|ref|XP_003739920.1| PREDICTED: 39S ribosomal protein L1, mitochondrial-like
[Metaseiulus occidentalis]
Length = 360
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 146/304 (48%), Gaps = 21/304 (6%)
Query: 36 RKGTRARK-----EGKKVRTEIKKVAWTPDSKKKKDIYASRKVDESNLTYPE----DDIY 86
RK R RK + KK EI+K SK K+ + SR+ E + +P+ DD++
Sbjct: 49 RKRNRIRKLQKLEQPKKTFAEIQK------SKLKRTVLGSRRYTEKD--WPKQINSDDVH 100
Query: 87 LQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIV 146
L K+ F + + RE HP MYN + + ATVE+ T+ +K+ ++D + +
Sbjct: 101 LLKEVVRPTFDLESCIQMHREVLHPQMYNHANSLVMATVELDMTS-KKRGHFVDQISGSL 159
Query: 147 EVEHSFDHGEDRS-IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVIC 205
+ H F++ + I+ F + A + G L G +K IE G V + +F V+C
Sbjct: 160 LLPHFFEYKRQVTRILCFTKSPDEATLALERGANLAGGEQLVKKIEAGEVDVASFDTVVC 219
Query: 206 NPKILADLMRIRGLLKKRIPTL-KSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSD 264
+ + + ++ +LKK++P L + + D++ + +R + + +S D E D+
Sbjct: 220 DLNMYEKIQSLKNILKKQMPRLGNTDAISEDVLNLIERHRKAVLFSASGDLYEPDYAAFT 279
Query: 265 FHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGL 324
I RL M + + N+K + ++ + P +P + FIT I L PS E+ LD +
Sbjct: 280 VPIARLQMPIDHIRANIKELFVGVNHLGPRGRPPN-SFITEIFLSCPPSLERLVLDKTPF 338
Query: 325 IEKP 328
+ P
Sbjct: 339 LIAP 342
>gi|290561214|gb|ADD38009.1| 39S ribosomal protein L1, mitochondrial [Lepeophtheirus salmonis]
Length = 353
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 152/327 (46%), Gaps = 25/327 (7%)
Query: 1 MSVLRSLIFSSSVPRKVFSISEVVSFHTATPYYAARKGTRARKEGKKVRTEIKK---VAW 57
MS+ + L+ SS + E + H + AAR+ TR RK + + KK +
Sbjct: 1 MSISQRLLGSSCA-----FLFEKRTIHLGSSLEAARRMTRDRKRKIALANKKKKEDRLRR 55
Query: 58 TPDSK--------KKKDIYASRKV-DESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRET 108
P K K ++ +R + D+ P DD++ + + + +EA+ +R+
Sbjct: 56 NPPPLPYKLELMLKSKGLWDNRHLRDKDENPVPVDDVFSLQIFTWPRYSIKEAIEKLRDF 115
Query: 109 HHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHG-EDRSIIAFCSQH 167
+ PTM++ P A + A +E K ++++ + +V + H +D +++ F
Sbjct: 116 YDPTMFDNPNALVKAKIEFRMIG-SKVTRFIEGFDRMVPIYHKYDEEIPSKTVCIFVPDE 174
Query: 168 ETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKRIPTL 227
E+ D G +L G D I I +G V + ++ + + ++ L + G L+ ++P
Sbjct: 175 ESKQIAVDAGASLAGGEDLIMDISKGRVDVSDIEYFLAHEDMVLSLKPLTGQLRDKVPRK 234
Query: 228 KSQTLGVDLIGIAKRLQTGIKYSMKKDP------QEQDFGYSDFHIGRLDMSQEQLEDNL 281
+ TLG ++ + K G K S+KK P E D+GY GRL M E+LEDN+
Sbjct: 235 QEGTLGNNIEYMVKTFTNGQKISIKKVPPSLLVEDEPDYGYCIVEFGRLQMDIEKLEDNI 294
Query: 282 KRILADISTMKPPSKPEDEDFITRILL 308
IL +S ++ +DFITR +L
Sbjct: 295 NGILLALSEKNVMTRVSKKDFITRCML 321
>gi|324515802|gb|ADY46321.1| 39S ribosomal protein L1 [Ascaris suum]
Length = 289
Score = 105 bits (262), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 114/237 (48%), Gaps = 4/237 (1%)
Query: 98 FQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGED 157
F A RE P++YN P A + +E++ +T +++ K + IV V H+F H E
Sbjct: 27 FMRHFAMHREMQQPSIYNNPNAPVRLRMELNMST-ERQTKMVSNSDEIVPVPHTFAHNEK 85
Query: 158 RSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIR 217
R+I+AF + + G + + IK I +G + F + + + ++ +R
Sbjct: 86 RTILAFARDPKLQELAVESGAEIALGPEMIKKILKGQFRTDDYDFCVSHVDMGPSILPLR 145
Query: 218 GLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQL 277
G+LK R PT + LG +L + + + G+K +++ DP +G D +GRL MS ++
Sbjct: 146 GILKTRFPTRINGGLGENLPEVIEMFKNGVKVNIRGDPVYPIWGLCDAIVGRLSMSDNEI 205
Query: 278 EDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLIEKPKAKELD 334
E N+ I+A + + P FI R L+ P F LD+ P +E++
Sbjct: 206 EANIGAIVAAVCKHR---NPALGPFINRALMMVVPGEAHFALDIGKFEPVPTPEEIE 259
>gi|225718968|gb|ACO15330.1| 50S ribosomal protein L1 [Caligus clemensi]
Length = 354
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 143/309 (46%), Gaps = 20/309 (6%)
Query: 20 ISEVVSFHTATPYYAARKGTRARKEGKKVRTEIKK---VAWTPDSK--------KKKDIY 68
+ EV F TA+ AR+ T+ RK + + KK + P K K ++
Sbjct: 16 VLEVKGFQTASVLEGARRMTQVRKRKIALANKKKKEDRLRRNPPPLPYKLELMLKSKGLW 75
Query: 69 ASRKV-DESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEI 127
+R + D+ P D+++ + + + QEA+ +R + PT+ + P A I A VE
Sbjct: 76 DNRHLRDKDENPIPNDNVFSLQHFTWPRYTIQEAIDQLRLFYDPTLLDNPNALIKAKVEF 135
Query: 128 STTTHQKKVKYMDPWTHIVEVEHSFDHG-EDRSIIAFCSQHETAAQLQDMGVALVGDSDT 186
T K ++++ +V + H +D + ++AF E+ D G + G +
Sbjct: 136 KMTG-AKSTRFIEGLDRMVPIYHKYDEDIPSKVVMAFVPDEESKKIALDAGASQAGGDEL 194
Query: 187 IKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTG 246
I I +G V + ++ + + ++ +L + G L++++P + TLG ++ + K G
Sbjct: 195 IMEIAKGRVDVSDVEYFLAHEDMVLNLKPLSGQLREKLPRKQDGTLGSNIEYMVKTFTNG 254
Query: 247 IKYSMKKDP------QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDE 300
K S+ K P E D+GY IG+L M LE+N+ IL +S ++
Sbjct: 255 QKVSVTKVPPSLFVEDEPDYGYCTAEIGKLQMDLHLLEENINGILLALSEKNAMTRVSRN 314
Query: 301 DFITRILLW 309
DFITR +L+
Sbjct: 315 DFITRCMLY 323
>gi|358340429|dbj|GAA36525.2| 50S ribosomal protein L1 [Clonorchis sinensis]
Length = 355
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/336 (22%), Positives = 151/336 (44%), Gaps = 7/336 (2%)
Query: 15 RKVFSISEVVSFHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIYASRKVD 74
R + + S + +T P A ++ K+ R +++ T + KK +D +RK+
Sbjct: 18 RSLTTSSRCLKGNTRKPRLTASGMGVMSEKSKEKRDSARQLLATTNRKKWED--TNRKLA 75
Query: 75 ESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQK 134
P ++YL +++ R F EA +RE P M++ + + A ++ T +K
Sbjct: 76 ALTGKLPTTNVYLSANFEQRHFLLAEAAEFLREAAQPEMFDCLQNPLRAKFTLNMRT-KK 134
Query: 135 KVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGL 194
K K++ + V + +S D +IA C + AA + G G ++ +E G
Sbjct: 135 KTKFLQKFEGHVVLPNSLDFLPKSRVIALCKDADDAALAVEAGAVHAGGTELFTRLENGS 194
Query: 195 VTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKD 254
V + V+ + L ++R +LK+R+PT+++ +G D++ + GI
Sbjct: 195 VHWEEYDTVVAHTDWEPTLKKLRHVLKERLPTMRNGRIGSDVLTLVTTHSIGISMESTAL 254
Query: 255 PQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+ + D IG+L +LE N++ + + K P + + + L+ P+
Sbjct: 255 EGVPEIAFLDVIIGQLAWDATRLETNMQAYFDAVQSNKSSRVPGNA--VLSVELYCPPTG 312
Query: 315 EKFKLDLSGLIEKPKAKELDTGEEIDDEPKEMAAQK 350
E+F +DL+ + P + E+ T ++ + E + + Q
Sbjct: 313 ERFPIDLAPYL--PVSAEISTADDDNLEEETVLTQN 346
>gi|443695597|gb|ELT96464.1| hypothetical protein CAPTEDRAFT_190708 [Capitella teleta]
Length = 363
Score = 87.4 bits (215), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 160/361 (44%), Gaps = 32/361 (8%)
Query: 2 SVLRSLIFSSSVPRKV--FSISEVVSFHTATPYYAARKGTRARKEGKKVRTEIKKVAWTP 59
+V R+L S +V V + + V+S H T KG R + V + +++ T
Sbjct: 7 NVFRTLCRSHAVRSAVQRSTGAGVISGHQMTQVRFKGKG-RYKMATDLVSSREQRIKRTK 65
Query: 60 DSKKKKDIYASRKVDESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRA 119
++ ++I E P DD++++ Y F +A+ +R+ P M +
Sbjct: 66 RVQELQEIIDKESDAELMARVPADDVWIRAYYPDPRLSFPDAVNQLRQFACPEMLDNMDG 125
Query: 120 FIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVA 179
I + ++ +T +KK K+M + + + H F ++ ++AFC E + ++ A
Sbjct: 126 TIQLHLTLNVST-KKKTKFMGNFIKTMLLPHKFGKEIEKRVVAFCKTPEDIQKAKEAKAA 184
Query: 180 LVGDSDTIKG---------------------IERGLVTMPTFQFVICNPKILADLMRIRG 218
VG D ++ IE+G + + V+ ++ D+ ++
Sbjct: 185 YVGGLDLMRAFEVWAGISSCRWICSCENRFQIEKGEIHHEDYDIVVSTMDMIDDITPLKK 244
Query: 219 LLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLE 278
LLK P K ++G D+ + + G + +D E + G+ +G L MS EQL
Sbjct: 245 LLKDLFPNSKKGSVGFDIEELVTKYVEGKTFESTRD--ENNVGHVTMDVGLLSMSDEQLI 302
Query: 279 DNLKRILADISTMK-PPSKPEDEDFITRILLWSEPSPEKFKLDLSGLIEKPKAKELDTGE 337
N + +++++ + PPS P FIT+ L PS ++ L S I K K++E++T +
Sbjct: 303 ANFQAYISEMNRHRTPPSGP----FITKAFLTCAPSADRVILAASETIVKEKSEEVETQQ 358
Query: 338 E 338
E
Sbjct: 359 E 359
>gi|118090004|ref|XP_420471.2| PREDICTED: 39S ribosomal protein L1, mitochondrial [Gallus gallus]
Length = 332
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 105/218 (48%), Gaps = 13/218 (5%)
Query: 78 LTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVK 137
L+ P DD+YL YK + +EA+ +++ + P+ F+ V + +KK
Sbjct: 73 LSKPVDDVYLTWYYKRPSYNVEEAVGMLKKFQE-LDFTYPKQFVYINVTLDMELPKKK-- 129
Query: 138 YMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTM 197
+D + IV + + F E ++ F + A ++ G A+VG + IK I + M
Sbjct: 130 KVDQFASIVLLPYRFTD-ETNKVLVFTENEQEAEIARENGAAVVGGVELIKWILEDEIQM 188
Query: 198 PTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQE 257
F I P I+ L+ +R LK++ P+ + +LG D+ + + + G++Y++
Sbjct: 189 ---DFYIAVPAIIPKLIPLRNKLKRKYPSTRRNSLGHDIPKMLQFFREGLEYTV------ 239
Query: 258 QDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
QD I RLDM EQ+ NLK I+ DI KP S
Sbjct: 240 QDERLIKTRIARLDMPTEQIVANLKTIIEDICKFKPSS 277
>gi|339260694|ref|XP_003368278.1| conserved hypothetical protein [Trichinella spiralis]
gi|316960780|gb|EFV48078.1| conserved hypothetical protein [Trichinella spiralis]
Length = 316
Score = 84.7 bits (208), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 119/262 (45%), Gaps = 24/262 (9%)
Query: 85 IYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTH 144
++ + Y + + ++ALA RE P+MYN P A + ++++ T +KK K+++
Sbjct: 62 VWKLQSYMPKRYFIKDALALHRELQSPSMYNNPSALLRLRLDLNMTL-EKKTKFVEQSKQ 120
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVA------LVGDSDTIKGIERGLVTMP 198
+ + H F HG+ R+I+AF + G LV D ER
Sbjct: 121 FIAMPHPFYHGQKRTILAFAKDPHIQVIANEAGAEITVEPLLVDDYLCAADSER------ 174
Query: 199 TFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQ 258
C L R+ R + + +G D+ + +TGI + + +D
Sbjct: 175 ------CCSNRRYRLQRLPFGHDDRDKSTQGSAIGSDIAALVNHFRTGIGFEVIQDAINP 228
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP-EKF 317
+G ++ IG+LDM + LE+N+K + I T+ P P FI R +L P+ E F
Sbjct: 229 QWGVTNVLIGKLDMPDDDLEENMKTV---IQTVYPLRSPALGPFIERAVLMVVPTVMEYF 285
Query: 318 KLDLSGLIEKPKAK-ELDTGEE 338
++DLS + +P + E D G++
Sbjct: 286 EIDLSPYLPEPTDEDEQDGGDQ 307
>gi|339238899|ref|XP_003381004.1| conserved hypothetical protein [Trichinella spiralis]
gi|316976021|gb|EFV59374.1| conserved hypothetical protein [Trichinella spiralis]
Length = 338
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 119/262 (45%), Gaps = 24/262 (9%)
Query: 85 IYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTH 144
++ + Y + + ++ALA RE P+MYN P A + ++++ T +KK K+++
Sbjct: 84 VWKLQSYMPKRYFIKDALALHRELQSPSMYNNPSALLRLRLDLNMTL-EKKTKFVEQSKQ 142
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVA------LVGDSDTIKGIERGLVTMP 198
+ + H F HG+ R+I+AF + G LV D ER
Sbjct: 143 FIAMPHPFYHGQKRTILAFAKDPHIQVIANEAGAEITVEPLLVDDYLCAADSER------ 196
Query: 199 TFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQ 258
C L R+ R + + +G D+ + +TGI + + +D
Sbjct: 197 ------CCSNRRYRLQRLPFGHDDRDKSTQGSAIGSDIAALVNHFRTGIGFEVIQDAINP 250
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP-EKF 317
+G ++ IG+LDM + LE+N+K + I T+ P P FI R +L P+ E F
Sbjct: 251 QWGVTNVLIGKLDMPDDDLEENMKTV---IQTVYPLRSPALGPFIERAVLMVVPTVMEYF 307
Query: 318 KLDLSGLIEKPKAK-ELDTGEE 338
++DLS + +P + E D G++
Sbjct: 308 EIDLSPYLPEPTDEDEQDGGDQ 329
>gi|390332320|ref|XP_783960.3| PREDICTED: 39S ribosomal protein L1, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 358
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 10/215 (4%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQ--KKVKY 138
P DD+Y+ Y ++ F EA+ +R P + TV IS +K K
Sbjct: 104 PVDDVYMICHYPPQMVTFHEAMDKLRSQDQWAHIRKPELYKNRTVTISILLDMALEKKKK 163
Query: 139 MDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMP 198
+ +T++V + H F ED ++ F +T A L D G +VG++DT++ I +
Sbjct: 164 VVAFTNMVILPHQFK--EDNKVLCFAEDSDTQAAL-DAGAFMVGNADTVQDIVDHRIHHR 220
Query: 199 TFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQ 258
F + + P+++ L +++ L+KR P K ++ ++ + G +Y ++
Sbjct: 221 AFDYCVSTPEMMPSLTKLKEKLRKRFPASKRGSVSNNIPAMLNLYCKGHEYKVQGKHNTI 280
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
+ IG+L ++ EQLE+N+ I++D+ + KP
Sbjct: 281 NCA-----IGKLSLTNEQLEENMAAIISDVCSHKP 310
>gi|224049125|ref|XP_002193271.1| PREDICTED: 39S ribosomal protein L1, mitochondrial [Taeniopygia
guttata]
Length = 260
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 129/273 (47%), Gaps = 17/273 (6%)
Query: 78 LTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVK 137
++ P DD+YL Y+ + ++A+A ++ + P+ F+ V + +KK
Sbjct: 1 MSKPVDDVYLTWLYRRPSYGLEQAVAMLKRFQE-LDFTHPKQFVYINVFLDMALQKKK-- 57
Query: 138 YMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTM 197
++P+++ V + H F E ++ F + A ++ G A+VG + IK I +
Sbjct: 58 KVEPFSNGVSLPHRFT-DEVNKVLVFTENEQEAEVAREHGAAIVGGVELIKWILEDEIQA 116
Query: 198 PTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQE 257
F + P I+ L+ +R LKK+ P+ + +LG D+ + + + +Y++
Sbjct: 117 ---DFYVAVPAIIPKLIPLRNKLKKKYPSTRKNSLGSDIPKMVQFFRECHQYTV------ 167
Query: 258 QDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKF 317
+D I RLDM E + NLK I+ DI T KP + D I + L+ + E
Sbjct: 168 EDESVIKTRIARLDMPTEHIIANLKTIIHDICTF----KPSNLDPIVQRLVIRSSTSEGL 223
Query: 318 KLDLSGLIEKPKAKELDTGEEIDDEPKEMAAQK 350
+L+L G++ + + E E DE ++ AQ+
Sbjct: 224 QLNLDGILPQVEKVEEKEEENAGDEDQQKPAQE 256
>gi|449280585|gb|EMC87853.1| 39S ribosomal protein L1, mitochondrial, partial [Columba livia]
Length = 282
Score = 82.0 bits (201), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 109/218 (50%), Gaps = 13/218 (5%)
Query: 78 LTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVK 137
L+ P DD+YL Y+ ++ +EA+A +++ + P+ ++ V + +KK
Sbjct: 25 LSRPVDDVYLTWLYERPSYEVEEAVAMLKKFQELD-FTYPKQYVYINVTLDMALQKKK-- 81
Query: 138 YMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTM 197
++ ++ V + + F E ++ F + A ++ G A+VG + IK I + +
Sbjct: 82 KVEQFSSTVLLPYRFT-DETNKVLVFTENEQEAEIARENGAAVVGGVELIKWILEDEIQV 140
Query: 198 PTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQE 257
++ + P I+ L+ +R LK++ P+ K +LG D+ + + + G++Y +
Sbjct: 141 DSY---VAVPAIMPKLIPLRNKLKRKYPSTKRNSLGHDIPKMLQFFREGLEYMV------ 191
Query: 258 QDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
QD I RLDMS EQ+ NLK ++ DI T KP S
Sbjct: 192 QDEHLIKTRIARLDMSVEQIVANLKTLIQDICTFKPAS 229
>gi|326918458|ref|XP_003205505.1| PREDICTED: hypothetical protein LOC100550846 [Meleagris gallopavo]
Length = 577
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 129/289 (44%), Gaps = 19/289 (6%)
Query: 28 TATPYYAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIYASRKVDESN---LTYPEDD 84
A P + R R G+ T A S+K K A +K L+ P DD
Sbjct: 56 AAHPELLGDQTERGRGFGQSDSTRRNTNAKRGSSQKAKQEEAQKKKGRGRRPLLSKPVDD 115
Query: 85 IYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTH 144
+YL Y+ + +EA+ +++ + P+ F+ V + +KK +D +T
Sbjct: 116 VYLTWYYERPSYNVEEAVGMLKKFQE-LDFTYPKQFVYINVTLDMELQKKK--KVDQFTS 172
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVI 204
IV + + F E ++ F + A ++ G A+VG + IK I + M F I
Sbjct: 173 IVLLPYRFTD-ETNKVLVFTENEQEAEIARENGAAVVGGIELIKWILEEEIKM---DFYI 228
Query: 205 CNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSD 264
P I+ L+ +R LK++ P+ K +LG D+ + + + G++Y + QD
Sbjct: 229 AVPAIMPKLIPLRSKLKQKYPSTKRNSLGHDIPKMLQFFREGLEYMV------QDERLIK 282
Query: 265 FHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
I RLDM EQ+ NLK I+ DI KP S F+ ++++ S S
Sbjct: 283 TRIARLDMPTEQIVANLKTIIEDICKFKPSSA---GPFVKKLVIRSSTS 328
>gi|241020870|ref|XP_002405895.1| ribosomal protein L1, putative [Ixodes scapularis]
gi|215491821|gb|EEC01462.1| ribosomal protein L1, putative [Ixodes scapularis]
Length = 181
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 79/147 (53%), Gaps = 2/147 (1%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
P DD+Y + + ++ +A+ RE+HHPT+ + AF+ A VE+ +T +KK +Y D
Sbjct: 26 PVDDVYFLESFVPPVYAAVDAIEMHRESHHPTVLDDADAFLYAFVELDLST-KKKNRYRD 84
Query: 141 PWTHIVEVEHSFDHGE-DRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPT 199
+ V H F+ + + I+ C + A + + G + G S IK I G +
Sbjct: 85 NFAGTVLFNHGFEFTKRQKRILVLCKNTDLATEALEAGAEVAGGSSVIKRILTGELDTKR 144
Query: 200 FQFVICNPKILADLMRIRGLLKKRIPT 226
F V+ + I+ADL ++RGLLK ++P+
Sbjct: 145 FDHVLAHVDIMADLPQLRGLLKTKLPS 171
>gi|353232971|emb|CCD80326.1| putative 50s ribosomal protein L1 [Schistosoma mansoni]
Length = 369
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 124/267 (46%), Gaps = 13/267 (4%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
P D YL +++ + + EA+ +RE+ HP MY+ + V ++ T +KK +++
Sbjct: 85 PTSDTYLMSEFEPKKYSLSEAVELLRESAHPDMYDCMDNPVRVKVTLNMCT-KKKTRFIP 143
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
+ + + + D ++A C + G G S I+ I +G +
Sbjct: 144 KFNGNLVLPNLLDFMPAHRVLAICQDSDDHEAYITAGAYDAGGSSLIQRISQGHYHWNEY 203
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVD---LIGIAKRLQTGIKYSMKKDPQE 257
V+ + + ++R +L++R+PT+K+ LG D LI I R S+ P+
Sbjct: 204 DTVVAHQSWEIQVTKLRHILRERLPTIKNGRLGDDVMKLISIHSRSTQLESTSIDGVPE- 262
Query: 258 QDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKF 317
G D +G+L +LE+NL+ L I + K S DFI + P+ E+F
Sbjct: 263 --IGLLDIILGQLSWDFNRLEENLRSYLECIESQK--SSRVINDFIQTGEIHCPPTGERF 318
Query: 318 KLDLS---GLIEKPKAKELDTGEEIDD 341
LD+S L +K K+++L E++D+
Sbjct: 319 ILDISQYYSLDDKSKSQQL-VNEDVDE 344
>gi|256070669|ref|XP_002571665.1| 50S ribosomal protein L1 [Schistosoma mansoni]
Length = 400
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 124/267 (46%), Gaps = 13/267 (4%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
P D YL +++ + + EA+ +RE+ HP MY+ + V ++ T +KK +++
Sbjct: 116 PTSDTYLMSEFEPKKYSLSEAVELLRESAHPDMYDCMDNPVRVKVTLNMCT-KKKTRFIP 174
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
+ + + + D ++A C + G G S I+ I +G +
Sbjct: 175 KFNGNLVLPNLLDFMPAHRVLAICQDSDDHEAYITAGAYDAGGSSLIQRISQGHYHWNEY 234
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVD---LIGIAKRLQTGIKYSMKKDPQE 257
V+ + + ++R +L++R+PT+K+ LG D LI I R S+ P+
Sbjct: 235 DTVVAHQSWEIQVTKLRHILRERLPTIKNGRLGDDVMKLISIHSRSTQLESTSIDGVPE- 293
Query: 258 QDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKF 317
G D +G+L +LE+NL+ L I + K S DFI + P+ E+F
Sbjct: 294 --IGLLDIILGQLSWDFNRLEENLRSYLECIESQK--SSRVINDFIQTGEIHCPPTGERF 349
Query: 318 KLDLS---GLIEKPKAKELDTGEEIDD 341
LD+S L +K K+++L E++D+
Sbjct: 350 ILDISQYYSLDDKSKSQQL-VNEDVDE 375
>gi|225712600|gb|ACO12146.1| 39S ribosomal protein L1, mitochondrial precursor [Lepeophtheirus
salmonis]
Length = 267
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/266 (23%), Positives = 121/266 (45%), Gaps = 19/266 (7%)
Query: 1 MSVLRSLIFSSSVPRKVFSISEVVSFHTATPYYAARKGTRARKEGKKVRTEIKK---VAW 57
MS+ + L+ SS + E + H + AAR+ TR RK + + KK +
Sbjct: 1 MSISQRLLGSSCA-----FLFEKRTIHLGSSLEAARRMTRDRKRKIALANKKKKEDRLRR 55
Query: 58 TPDSK--------KKKDIYASRKV-DESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRET 108
P K K ++ +R + D+ P DD++ + + + +EA+ +R+
Sbjct: 56 NPPPLPYKLELMLKSKGLWDNRHLRDKDENPVPVDDVFSLQHFTWPRYSIKEAIEKLRDF 115
Query: 109 HHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHG-EDRSIIAFCSQH 167
+ PTM++ P A + A +E K ++++ + +V + H +D +++ F
Sbjct: 116 YDPTMFDNPNALVKAKIEFRMIG-SKVTRFIEGFDRMVPIYHKYDEEIPSKTVCIFVPDE 174
Query: 168 ETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKRIPTL 227
E+ D G +L G D I I +G V + ++ + + ++ L + G L+ ++P
Sbjct: 175 ESKQIAVDAGASLAGGEDLIMDISKGRVDVSDIEYFLAHEDMVLSLKPLTGQLRDKVPRK 234
Query: 228 KSQTLGVDLIGIAKRLQTGIKYSMKK 253
+ TLG ++ + K G K S+KK
Sbjct: 235 QEGTLGNNIEYMVKTFTNGQKISIKK 260
>gi|327274214|ref|XP_003221873.1| PREDICTED: 39S ribosomal protein L1, mitochondrial-like [Anolis
carolinensis]
Length = 343
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 145/314 (46%), Gaps = 25/314 (7%)
Query: 3 VLRSLIFSSSVPRKVFSISEVVSFHTATPYYAARKGTR---ARKEGKKVRTEIKKVAWTP 59
VLR + R VFS ++ S T P +A + A K KK +++ +K
Sbjct: 5 VLRCCLRRVLAQRPVFSRNDQHS--TVLPCFANSLISHRHYAAKPAKKTKSDPQKKPQET 62
Query: 60 DSKKKKDIYASRKVDESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRA 119
+SK+KK +++ L P DD+YL Y+ ++ + A+ +++ + P
Sbjct: 63 ESKQKK-----KRLSFPLLKEPTDDVYLTWCYERPVYDAEVAVDMLKKFQQ-LDFTSPNQ 116
Query: 120 FIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVA 179
+ A + + +KK ++P+ + V + + F E ++ F + E ++ G A
Sbjct: 117 PVHADITLDLAMDKKKT--VEPFVNTVLLPYRFTE-EINKVLVFTDKAEDVKTARENGAA 173
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGI 239
VG ++ IK I G + + + P I + ++ +R LKK+ P K+ ++ D+ +
Sbjct: 174 FVGGAELIKPIFDGEIQA---DYYVSVPTIASKILPLRATLKKKFPRTKNGSISYDVAEM 230
Query: 240 AKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPED 299
+ +YS+ ++ DF ++ I LDM EQ+ NL ++ D+ KP S
Sbjct: 231 VGFFKLCHEYSLLEN---DDFIHTT--IATLDMPNEQIVANLDAVIKDVCKYKPLSY--- 282
Query: 300 EDFITRILLWSEPS 313
F+TR+++ S S
Sbjct: 283 GPFVTRLIIRSSSS 296
>gi|390460715|ref|XP_002745751.2| PREDICTED: 39S ribosomal protein L1, mitochondrial [Callithrix
jacchus]
Length = 318
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 118/238 (49%), Gaps = 24/238 (10%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETH-----HPTMYNLPRAFIGATVEISTTTHQKK 135
PEDD+YL++ Y +I++ ++A+ +++ HP F+ T++++ Q K
Sbjct: 75 PEDDVYLKRLYPRQIYEVEKAVHLLKKFQVLDFTHPKQ----SVFLDLTLDMT----QGK 126
Query: 136 VKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLV 195
K ++P+T +V + + F E + + F ++ G A G ++ I+ I +
Sbjct: 127 KKDVEPFTSVVSLPYPF-ASEIKKVAVFTGNASEVEIAEENGAAFAGGTNLIQKILDDEI 185
Query: 196 TMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDP 255
+ F + P+I+ +L ++R L KR P + ++G D+ + + + G++ +K D
Sbjct: 186 VV---DFYVAVPEIMPELSQLRKKLNKRFPKVSQNSIGRDIPKMLEFFKNGLE--IKVDE 240
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+ ++F + I LDMS +Q+ NL+ ++ ++ +P S F+ R L S S
Sbjct: 241 ERENFLQT--RIATLDMSSDQIAANLQAVINEVCRHRPLSL---GPFVIRAFLRSSTS 293
>gi|157822041|ref|NP_001099467.1| 39S ribosomal protein L1, mitochondrial [Rattus norvegicus]
gi|149046867|gb|EDL99641.1| mitochondrial ribosomal protein L1 (predicted) [Rattus norvegicus]
gi|197245990|gb|AAI68772.1| Mitochondrial ribosomal protein L1 [Rattus norvegicus]
Length = 323
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 110/233 (47%), Gaps = 14/233 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y RI++ ++A+ +++ N P+ G ++++ K K ++
Sbjct: 84 PEDDVYLKRLYPRRIYEVEKAIHLLKKFQVLDFTN-PKQ--GVYLDLTLDMALGKKKKVE 140
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ ++ + H F E + F ++ G A G +D +K I V +
Sbjct: 141 PFASVIALPHPFS-SEVNKVAVFTGNASEIKIAEENGAAFAGGADLVKKILDDEVVV--- 196
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L +R LKKR P ++G D+ + + +T + + D + Q+F
Sbjct: 197 DFYVAVPEIMGELNPLRKKLKKRFPKATRNSIGRDIPKMLELFKTA--HEIMVDEERQNF 254
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+ I LDM +QL NL+ ++ ++ +P + F+ R L S S
Sbjct: 255 LSTK--IATLDMPSDQLAANLQAVINEVCRHRPLNL---GPFVVRAFLRSSTS 302
>gi|13559355|dbj|BAB40837.1| mitochondrial ribosomal protein L1 (L1mt) [Mus musculus]
gi|38173937|gb|AAH61042.1| Mitochondrial ribosomal protein L1 [Mus musculus]
gi|148688414|gb|EDL20361.1| mitochondrial ribosomal protein L1 [Mus musculus]
Length = 314
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y RI++ ++A+ +++ N P+ G ++++ K K ++
Sbjct: 65 PEDDVYLKRLYPRRIYEVEKAIHLLKKFQVLDFTN-PKQ--GVYLDLTLDMALGKKKTVE 121
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ ++ + H F E + F + ++ G A G +D +K I V +
Sbjct: 122 PFASVIALPHLFS-SEVNKVAVFTANASEIKIAEENGAAFAGGTDLVKKIMDDEVVV--- 177
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L +R LKKR P ++G D+ + + +T + + D + Q+F
Sbjct: 178 DFYVAVPEIMGELNPLRKKLKKRFPKATRNSIGRDIPKMLELFKTA--HEIMVDEERQNF 235
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+ I LDM +Q+ NL+ ++ ++ +P + F+ R L S S
Sbjct: 236 LST--KIATLDMPSDQIAANLQAVINEVCKHRPLNL---GPFVVRAFLRSSTS 283
>gi|392350049|ref|XP_003750557.1| PREDICTED: 39S ribosomal protein L1, mitochondrial-like [Rattus
norvegicus]
Length = 328
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 110/233 (47%), Gaps = 14/233 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y RI++ ++A+ +++ N P+ G ++++ K K ++
Sbjct: 84 PEDDVYLKRLYPRRIYEVEKAIHLLKKFQVLDFTN-PKQ--GVYLDLTLDMALGKKKKVE 140
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ ++ + H F E + F ++ G A G +D +K I V +
Sbjct: 141 PFASVIALPHPFS-SEVNKVAVFTGNASEIKIAEENGAAFAGGADLVKKILDDEVVV--- 196
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L +R LKKR P ++G D+ + + +T + + D + Q+F
Sbjct: 197 DFYVAVPEIMGELNPLRKKLKKRFPKATRNSIGRDIPKMLELFKTA--HEIMVDEERQNF 254
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+ I LDM +QL NL+ ++ ++ +P + F+ R L S S
Sbjct: 255 LSTK--IATLDMPSDQLAANLQAVINEVCRHRPLNL---GPFVVRAFLRSSTS 302
>gi|12845715|dbj|BAB26866.1| unnamed protein product [Mus musculus]
Length = 314
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y RI++ ++A+ +++ N P+ G +++ K + ++
Sbjct: 65 PEDDVYLRRLYPRRIYEVEKAIHLLKKFQVLGFTN-PKQ--GVYLDLRLDMALGKKRTVE 121
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ ++ + H F E + F + ++ GVA G +D +K I V +
Sbjct: 122 PFASVIALPHLFS-SEVNKVAVFTANASEIKIAEENGVAFAGGTDLVKKIMDDEVVV--- 177
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L +R LKKR P ++G D+ + + +T + + D + Q+F
Sbjct: 178 DFYVAVPEIMGELNPLRKKLKKRFPKATRNSIGRDIPKMLELFKTA--HEIMVDEERQNF 235
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+ I LDM +Q+ NL+ ++ ++ +P + F+ R L S S
Sbjct: 236 LST--KIATLDMPSDQIAANLQAVINEVCKHRPLNL---GPFVVRAFLRSSTS 283
>gi|354502444|ref|XP_003513296.1| PREDICTED: 39S ribosomal protein L1, mitochondrial-like [Cricetulus
griseus]
gi|344236132|gb|EGV92235.1| 39S ribosomal protein L1, mitochondrial [Cricetulus griseus]
Length = 326
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y RI++ ++A+ +++ N P+ G ++++ K K ++
Sbjct: 87 PEDDVYLKRLYPRRIYEVEKAIHLLKKVQVLDFTN-PKQ--GVYLDLTLDMASGKKKKVE 143
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ ++ + + F E + F ++ G A G +D +K I V +
Sbjct: 144 PFASVISLPYPF-ASEVNKVAVFTGTASEIKIAEENGAAFAGGADLVKKILDDEVVV--- 199
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L +R LKKR P ++G D+ + + +TG + + D + Q+F
Sbjct: 200 DFYVAVPEIMTELNPLRKKLKKRFPKTTRNSIGRDIPKMLELFKTG--HEIVVDEERQNF 257
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+ I LDM +Q+ NL+ ++ ++ +P + F+ R L S S
Sbjct: 258 LST--KIATLDMPSDQISANLEAVINEVYRHRPQNL---GPFVVRAFLRSSTS 305
>gi|84875528|ref|NP_444388.2| 39S ribosomal protein L1, mitochondrial isoform 1 [Mus musculus]
gi|239938695|sp|Q99N96.2|RM01_MOUSE RecName: Full=39S ribosomal protein L1, mitochondrial; Short=L1mt;
Short=MRP-L1; Flags: Precursor
gi|74209245|dbj|BAE24994.1| unnamed protein product [Mus musculus]
Length = 336
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y RI++ ++A+ +++ N P+ G ++++ K K ++
Sbjct: 87 PEDDVYLKRLYPRRIYEVEKAIHLLKKFQVLDFTN-PKQ--GVYLDLTLDMALGKKKTVE 143
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ ++ + H F E + F + ++ G A G +D +K I V +
Sbjct: 144 PFASVIALPHLFS-SEVNKVAVFTANASEIKIAEENGAAFAGGTDLVKKIMDDEVVV--- 199
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L +R LKKR P ++G D+ + + +T + + D + Q+F
Sbjct: 200 DFYVAVPEIMGELNPLRKKLKKRFPKATRNSIGRDIPKMLELFKTA--HEIMVDEERQNF 257
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+ I LDM +Q+ NL+ ++ ++ +P + F+ R L S S
Sbjct: 258 LSTK--IATLDMPSDQIAANLQAVINEVCKHRPLNL---GPFVVRAFLRSSTS 305
>gi|221220058|gb|ACM08690.1| 39S ribosomal protein L1, mitochondrial precursor [Salmo salar]
Length = 323
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 115/235 (48%), Gaps = 21/235 (8%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIR--ETHHPTMYNLPRAFIGATVEISTTTHQKKVKY 138
P DD+Y+ + Y +++ A+ ++ +T T + P +I +++ +K K
Sbjct: 88 PVDDVYVTRFYPKPVYETAVAVDMLKNFQTLDYTTLDQP-VYINLKLDMKL----EKKKK 142
Query: 139 MDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMP 198
+DP+ V + H F E + F + A Q+ G A VG +D ++ I V
Sbjct: 143 VDPFVSTVHLPHPFK-TEVNKVAVFTENPDQAKVAQENGAAFVGGADLVQRILDDEVDA- 200
Query: 199 TFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQ 258
F + P +++ L+ ++ L+K+ P K ++GVD+ + + +TG +Y+++KD
Sbjct: 201 --DFYVAVPDMISKLLPLKNKLRKKFPKNKRGSVGVDIPKMLELFKTGHEYTVEKDAVIT 258
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+G LDM +EQL N++ ++ D+ + +P S FI R ++ S+ S
Sbjct: 259 -------RVGTLDMPKEQLIANMQTVVEDVCSHRPASFGH---FIERAIVSSQTS 303
>gi|355687313|gb|EHH25897.1| 39S ribosomal protein L1, mitochondrial, partial [Macaca mulatta]
gi|355749289|gb|EHH53688.1| 39S ribosomal protein L1, mitochondrial, partial [Macaca
fascicularis]
Length = 323
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 135/290 (46%), Gaps = 26/290 (8%)
Query: 4 LRSLIFSSSVPRKVFSISEVVSFHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPDSKK 63
L +++ +SV S V+ ++AA T++ K+ K V E TPD +
Sbjct: 20 LSKMVYQTSV------CSCSVNIQVPNRHFAA--ATKSAKKTKNVAKE-----KTPD--E 64
Query: 64 KKDIYASRKVDESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGA 123
KKD K PEDD+YL++ Y +I+ ++A+ +++ + P+ +
Sbjct: 65 KKDEIEKIKAYPYMEGEPEDDVYLKRLYPRQIYDVEKAVHLLKK-FQVLDFTGPKQSVYL 123
Query: 124 TVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGD 183
+ + T Q + K + P+T ++ + + F E + F ++ G A G
Sbjct: 124 DLTLDMT--QGRKKNVAPFTSVLSLPYPF-ASEINKVAVFTENASEVKIAEENGAAFAGG 180
Query: 184 SDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRL 243
+ I+ I + + F + P+I+ +L R+R L KR P + ++G D+ + +
Sbjct: 181 TSLIQKIWDDEIVV---DFYVAVPEIMPELNRLRKKLGKRFPRVSRNSIGRDIPKMLEFF 237
Query: 244 QTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
+ G + +K D + ++F + I RLDMS +Q+ NL+ ++ ++ +P
Sbjct: 238 KNG--HEIKVDEERENFLQT--KIARLDMSSDQIAANLQAVINEVCRHRP 283
>gi|291401567|ref|XP_002717047.1| PREDICTED: mitochondrial ribosomal protein L1 [Oryctolagus
cuniculus]
Length = 326
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/252 (23%), Positives = 121/252 (48%), Gaps = 15/252 (5%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
P DD+YL++ Y +I++ ++A+ +++ N P+ G ++++ K K ++
Sbjct: 83 PADDVYLKRLYPRQIYEVEKAVHLLKKFQILDFTN-PKQ--GVYLDLTLDMALGKKKRVE 139
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ ++ + F E + F ++ G A G +D ++ I + +
Sbjct: 140 PFASVIGFPYPFS-SEINKVAVFTGNPSEIKIAEENGAAFAGGTDLVQKILDDEIQV--- 195
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F I P+++ +L +R LKKR P L ++G D+ + + +TG + ++ D + ++F
Sbjct: 196 DFYIAVPEMMPELNPLRKKLKKRFPKLTRNSIGRDIPKMLELFKTG--HEIEVDEERENF 253
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
+ I LDMS EQ+ NL+ ++ ++ +P + F+ R L S S E L
Sbjct: 254 --LETKIATLDMSSEQIAANLQAVINEVCRHRPLNL---GPFVVRAFLRSSTS-EGLLLK 307
Query: 321 LSGLIEKPKAKE 332
+ L+ K +A E
Sbjct: 308 VDPLLPKEEATE 319
>gi|403263308|ref|XP_003923981.1| PREDICTED: 39S ribosomal protein L1, mitochondrial [Saimiri
boliviensis boliviensis]
Length = 325
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 111/220 (50%), Gaps = 21/220 (9%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETH-----HPTMYNLPRAFIGATVEISTTTHQKK 135
PEDD+YL++ Y +I++ ++A+ +++ HP F+ T++++ + K
Sbjct: 82 PEDDVYLKRLYPRQIYEVEKAVHLLKKFQVLDFTHPKQ----SVFLDLTLDMT----RGK 133
Query: 136 VKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLV 195
K ++P+T +V + + F E + + F ++ G A G ++ I+ I +
Sbjct: 134 KKAVEPFTSVVSLPYPF-ASEIKKVAVFTGNASEVEIAEENGAAFAGGTNLIQKILDDEI 192
Query: 196 TMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDP 255
+ F + P+I+ +L +++ L KR P ++G D+ + + + G++ +K D
Sbjct: 193 IV---DFYVAVPEIMPELSQLKKKLNKRFPKFSQNSIGRDIPKMIEFFKNGLE--IKVDE 247
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+ ++F + I LDMS +Q+ NL+ ++ ++ +P S
Sbjct: 248 ERENFLQA--RIATLDMSSDQIAANLQAVINEVCRHRPLS 285
>gi|348513963|ref|XP_003444510.1| PREDICTED: 39S ribosomal protein L1, mitochondrial-like
[Oreochromis niloticus]
Length = 319
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 107/235 (45%), Gaps = 20/235 (8%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHP--TMYNLPRAFIGATVEISTTTHQKKVKY 138
P DD+Y+ + Y ++ EA+ +++ T +N P +++ +K K
Sbjct: 84 PVDDVYVMRYYPRTLYDPAEAIDMLKKFQALDFTPHNQP-----VYIDLKLDMKLEKKKK 138
Query: 139 MDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMP 198
+DP+ V + H+F +R ++ F A ++ G G + I+ I ++
Sbjct: 139 VDPFVSTVHLPHAFKAEMNR-VLVFTEDANQATVARENGAVFAGGVELIQPILDDEISA- 196
Query: 199 TFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQ 258
F + P IL L+ ++ L+K+ P K ++G+++ + + +TG +Y ++ D
Sbjct: 197 --DFYVAVPDILPKLVPLKNKLRKKFPKSKRGSVGINVPKMLELFKTGHEYMVESD---- 250
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
Y I LDM E + NL+ IL D+ + +P S FI R ++ S S
Sbjct: 251 --CYVRTQIATLDMPSEHIFANLQTILVDVCSHRPASL---GPFIERAIIASHTS 300
>gi|402869442|ref|XP_003898769.1| PREDICTED: 39S ribosomal protein L1, mitochondrial [Papio anubis]
Length = 324
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 105/213 (49%), Gaps = 11/213 (5%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I+ ++A+ +++ + P+ + + + T Q + K +
Sbjct: 82 PEDDVYLKRLYPRQIYDVEKAVHLLKK-FQVLDFTGPKQSVYLDLTLDMT--QGRKKNVA 138
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+T ++ + + F E + F ++ G A G + I+ I + +
Sbjct: 139 PFTSVLSLPYPF-ASEINKVAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVV--- 194
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L R+R L KR P + ++G D+ + + + G + +K D + ++F
Sbjct: 195 DFYVAVPEIMPELNRLRKKLGKRFPRVSRNSIGRDIPKMLEFFKNG--HEIKVDEERENF 252
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
+ I RLDMS +Q+ NL+ ++ ++ +P
Sbjct: 253 LQT--KIARLDMSSDQIAANLQAVINEVCRHRP 283
>gi|47227636|emb|CAG09633.1| unnamed protein product [Tetraodon nigroviridis]
Length = 311
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 129/292 (44%), Gaps = 34/292 (11%)
Query: 30 TPYYAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIYASRKVDESNLTY-PEDDIYLQ 88
TP + A K KK +TE VA P +KK +R + P DD+++
Sbjct: 27 TPRNVPIRAFAAVKAQKKDKTE---VAEEPKKQKKVINDENRHKPYGKTAWVPVDDVHIL 83
Query: 89 KDYKLRIFQFQEALAAIRE-------THHPTMYNLPRAFIGATVEISTTTHQKKVKYMDP 141
+ Y I++ EA+ ++ H +Y V++ +K K +DP
Sbjct: 84 RYYPRTIYEAAEAIDMLKNFQKLDFTPHEQPVY----------VDLRLNMKLEKKKKVDP 133
Query: 142 WTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
+ V + H F G +R ++ H+ +++ G A+ G + I+ I ++
Sbjct: 134 FISTVHLPHPFKAGMNRVLVFTEDAHQAKVAMEN-GAAIAGGVELIQPILDDEISA---D 189
Query: 202 FVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFG 261
F I P IL+ L+ ++ L+K+ P K ++G+ + + + +TG +Y ++ +
Sbjct: 190 FYIAVPDILSKLVPLKNKLRKKFPKSKRGSVGLHIPKMLELFKTGHEYLVENE------C 243
Query: 262 YSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
Y I LDM +E + NL+ +L D+ + +P + FI R ++ S S
Sbjct: 244 YIRTQIATLDMPKEHIFSNLRTVLLDVCSHRP---ADMGPFIERAIMASHTS 292
>gi|350587687|ref|XP_003129170.3| PREDICTED: 39S ribosomal protein L1, mitochondrial-like, partial
[Sus scrofa]
Length = 277
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 112/233 (48%), Gaps = 14/233 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I++ ++A+ +++ N P G ++++ K K ++
Sbjct: 34 PEDDVYLKRLYPRQIYEVEKAIHLLKKFQVLDFTN-PNQ--GVYLDLTLDMTLGKKKKVE 90
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ ++ + + F E + F ++ G A G ++ I+ I +
Sbjct: 91 PFASVLSLPYPF-TSEINKVAVFTGNASEIKIAEEKGAAFAGGTNLIQKILDDEIQP--- 146
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L +R LKKR P L ++G D+ + + +TG + +K D + ++F
Sbjct: 147 DFYVAVPEIMPELNPLRKKLKKRFPKLTRNSIGRDIPKMLELFKTG--HEIKVDEERENF 204
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+ I L+MS +Q+ NL+ ++ ++ +P + F+ R L S S
Sbjct: 205 --LETKIATLNMSSDQIAANLQAVINEVCRQRPLNL---GPFVVRAFLRSSTS 252
>gi|417399047|gb|JAA46555.1| Putative 39s ribosomal protein l1 [Desmodus rotundus]
Length = 329
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/267 (22%), Positives = 127/267 (47%), Gaps = 19/267 (7%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I++ ++A+ +++ + + G ++++ +K K ++
Sbjct: 81 PEDDVYLKRLYPRQIYEVEKAIHLLKKFQ---ILDFTNPAQGVYLDLTLDMALRKKKKVE 137
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ ++ + + F E + F ++ G A G +D I+ I +
Sbjct: 138 PFASVLRLPYPFV-SEINKVAVFTGSASEIKIAEENGAAFAGGADLIQKILDDEIQS--- 193
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ L ++ L KR P L ++G D+ + + +TG + +K D + ++F
Sbjct: 194 DFYVAVPEIMPQLNPLKKKLNKRFPKLTRNSIGRDIPKMLELFKTG--HEIKVDEERENF 251
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
+ I L+MS +++ NL+ ++ ++ +P + F+ R L S S E L
Sbjct: 252 LKTK--IATLNMSSDEIAANLQAVINEVCRHRP---LDLGPFVVRAFLRSSTS-EGLLLK 305
Query: 321 LSGLIEKPKAKELDTGEEIDDEPKEMA 347
+ L+ KE++T E + P+ +A
Sbjct: 306 IEPLL----PKEVETKESYKEAPETVA 328
>gi|297673829|ref|XP_002814951.1| PREDICTED: 39S ribosomal protein L1, mitochondrial [Pongo abelii]
Length = 325
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I++ ++A+ +++ + P+ + + + +KK ++
Sbjct: 82 PEDDVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLDLTLDMALGKKK--NVE 138
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+T ++ + + F E + F ++ G A G + I+ I +
Sbjct: 139 PFTSVLSLPYPF-ASEINKVAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA--- 194
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F I P+I+ +L R+R L KR P L ++G D+ + + + G + +K D + ++F
Sbjct: 195 DFYIAVPEIMPELSRLRKKLNKRYPKLSRNSIGRDIPKMLELFKNG--HEIKVDEERENF 252
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+ I LDMS +Q+ NL+ ++ ++ +P + F+ R L S S
Sbjct: 253 LQTK--IATLDMSSDQIAANLQVVINEVCRHRPLNLG---PFVVRAFLRSSTS 300
>gi|426344744|ref|XP_004038918.1| PREDICTED: 39S ribosomal protein L1, mitochondrial [Gorilla gorilla
gorilla]
Length = 325
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/233 (22%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I++ ++A+ +++ + P+ + + + +KK ++
Sbjct: 82 PEDDVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLDLTLDMALGKKK--NVE 138
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+T ++ + + F E + F ++ G A G S I+ I +
Sbjct: 139 PFTSVLSLPYPF-ASEINKVAVFTENASEVKIAEENGAAFAGGSSLIQKIWDDEIVA--- 194
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L R+R L K+ P L ++G D+ + + + G + +K D + ++F
Sbjct: 195 DFYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNG--HEIKVDEERENF 252
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+ I LDMS +Q+ NL+ ++ ++ +P + F+ R L S S
Sbjct: 253 LQT--KIATLDMSSDQIAANLQAVINEVCRHRPLNLG---PFVVRAFLRSSTS 300
>gi|13488633|dbj|BAB40180.1| mitochondrial ribosomal protein L1 (L1mt) [Homo sapiens]
gi|15680069|gb|AAH14356.1| Mitochondrial ribosomal protein L1 [Homo sapiens]
gi|21595756|gb|AAH32595.1| Mitochondrial ribosomal protein L1 [Homo sapiens]
Length = 303
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I++ ++A+ +++ + P+ + + + +KK ++
Sbjct: 60 PEDDVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLDLTLDMALGKKK--NVE 116
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+T ++ + + F E + F ++ G A G + I+ I +
Sbjct: 117 PFTSVLSLPYPF-ASEINKVAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA--- 172
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L R+R L K+ P L ++G D+ + + + G + +K D + ++F
Sbjct: 173 DFYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNG--HEIKVDEERENF 230
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
+ I LDMS +Q+ NL+ ++ ++ +P
Sbjct: 231 LQT--KIATLDMSSDQIAANLQAVINEVCRHRP 261
>gi|118142816|gb|AAH17765.1| MRPL1 protein [Homo sapiens]
Length = 302
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I++ ++A+ +++ + P+ + + + +KK ++
Sbjct: 60 PEDDVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLDLTLDMALGKKK--NVE 116
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+T ++ + + F E + F ++ G A G + I+ I +
Sbjct: 117 PFTSVLSLPYPF-ASEINKVAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA--- 172
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L R+R L K+ P L ++G D+ + + + G + +K D + ++F
Sbjct: 173 DFYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNG--HEIKVDEERENF 230
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
+ I LDMS +Q+ NL+ ++ ++ +P
Sbjct: 231 LQT--KIATLDMSSDQIAANLQAVINEVCRHRP 261
>gi|395834220|ref|XP_003790107.1| PREDICTED: 39S ribosomal protein L1, mitochondrial-like [Otolemur
garnettii]
Length = 325
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 113/233 (48%), Gaps = 14/233 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I+ ++A+ +++ + + G ++++ K K ++
Sbjct: 82 PEDDVYLKRLYPRQIYDVEKAIPLLKKFQ---ILDFTNPSQGVYLDLTLDIALGKKKKVE 138
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ ++ + H F E + F E ++ G A G +D I+ I + +
Sbjct: 139 PFASVIRLPHPFS-SEINKVAVFTGNAEEVKIAEENGSAFAGGTDLIQKILDDEIDV--- 194
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L ++ LKKR P L ++G D+ + + Q G++ +K D + ++F
Sbjct: 195 DFYVAVPEIMPELHPLKKKLKKRFPRLSQNSVGRDIPKMLELFQYGLE--IKVDKERENF 252
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+ I LDMS +Q+ NL+ ++ ++ +P S F+ R L S S
Sbjct: 253 LKT--KIATLDMSSDQIIANLQAVIDEVCKHRPLSL---GPFVVRAFLRSSTS 300
>gi|397524710|ref|XP_003832329.1| PREDICTED: 39S ribosomal protein L1, mitochondrial [Pan paniscus]
Length = 325
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I++ ++A+ +++ + P+ + + + +KK ++
Sbjct: 82 PEDDVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLDLTLDMALGKKK--NVE 138
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+T ++ + + F E + F ++ G A G + I+ I +
Sbjct: 139 PFTSVLSLPYPF-ASEINKVAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA--- 194
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L R+R L K+ P L ++G D+ + + + G + +K D + ++F
Sbjct: 195 DFYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNG--HEIKVDEERENF 252
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+ I LDMS +Q+ NL+ ++ ++ +P + F+ R L S S
Sbjct: 253 LQT--KIATLDMSSDQIAANLQAVINEVCRHRPLNL---GPFVVRAFLRSSTS 300
>gi|332233298|ref|XP_003265841.1| PREDICTED: 39S ribosomal protein L1, mitochondrial [Nomascus
leucogenys]
Length = 325
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/233 (21%), Positives = 110/233 (47%), Gaps = 14/233 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I++ ++A+ +++ + + ++++ K K ++
Sbjct: 82 PEDDVYLKRLYPRQIYEVEKAVHLLKKF---LILDFTSPKQSVYLDLTLDMALGKKKNVE 138
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+T ++ + + F E + F ++ G A G + I+ I +
Sbjct: 139 PFTSVLSLPYPF-ASEINKVAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA--- 194
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L R++ L KR P L ++G D+ + + + G + +K D + ++F
Sbjct: 195 DFYVAVPEIMPELNRLKKKLNKRFPKLSRNSIGRDIPKMLELFKNG--HEIKVDEERENF 252
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+ I LDMS +Q+ NL+ ++ ++ +P + F+ R L S S
Sbjct: 253 LQT--KIATLDMSSDQIAANLQAVINEVCRHRPLNL---GPFVVRAFLRSSTS 300
>gi|221219140|gb|ACM08231.1| 39S ribosomal protein L1, mitochondrial precursor [Salmo salar]
Length = 323
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 114/235 (48%), Gaps = 21/235 (8%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIR--ETHHPTMYNLPRAFIGATVEISTTTHQKKVKY 138
P DD+Y+ + Y +++ A+ ++ +T T + P +I +++ +K K
Sbjct: 88 PVDDVYVTRFYPKPVYETAVAVDMLKNFQTLDYTTLDQP-VYINLKLDMK----PEKKKK 142
Query: 139 MDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMP 198
+D + V + H F E + F + A Q+ G A VG +D ++ I V
Sbjct: 143 VDLFVSTVHLPHPFK-TEVNKVAVFTENPDQAKVAQENGAAFVGGADLVQRILDDEVDA- 200
Query: 199 TFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQ 258
F + P +++ L+ ++ L+K+ P K ++GVD+ + + +TG +Y+++KD
Sbjct: 201 --DFYVAVPDMISKLLPLKNKLRKKFPKNKRGSVGVDIPKMLELFKTGHEYTVEKDAVIT 258
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+G LD+ +EQL N++ ++ D+ + +P S FI R ++ S+ S
Sbjct: 259 -------RVGTLDVPKEQLIANMQTVVEDVCSHRPASFGH---FIERAIVSSQTS 303
>gi|143770802|ref|NP_064621.3| 39S ribosomal protein L1, mitochondrial precursor [Homo sapiens]
gi|239938694|sp|Q9BYD6.2|RM01_HUMAN RecName: Full=39S ribosomal protein L1, mitochondrial; Short=L1mt;
Short=MRP-L1; Flags: Precursor
gi|119626225|gb|EAX05820.1| mitochondrial ribosomal protein L1 [Homo sapiens]
gi|410266614|gb|JAA21273.1| mitochondrial ribosomal protein L1 [Pan troglodytes]
gi|410294188|gb|JAA25694.1| mitochondrial ribosomal protein L1 [Pan troglodytes]
gi|410355357|gb|JAA44282.1| mitochondrial ribosomal protein L1 [Pan troglodytes]
Length = 325
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I++ ++A+ +++ + P+ + + + +KK ++
Sbjct: 82 PEDDVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLDLTLDMALGKKK--NVE 138
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+T ++ + + F E + F ++ G A G + I+ I +
Sbjct: 139 PFTSVLSLPYPF-ASEINKVAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA--- 194
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L R+R L K+ P L ++G D+ + + + G + +K D + ++F
Sbjct: 195 DFYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNG--HEIKVDEERENF 252
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+ I LDMS +Q+ NL+ ++ ++ +P + F+ R L S S
Sbjct: 253 LQT--KIATLDMSSDQIAANLQAVINEVCRHRPLNL---GPFVVRAFLRSSTS 300
>gi|440910584|gb|ELR60369.1| 39S ribosomal protein L1, mitochondrial [Bos grunniens mutus]
Length = 325
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 117/247 (47%), Gaps = 15/247 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I++ ++A+ +++ N P+ G ++++ K K ++
Sbjct: 82 PEDDVYLKRLYPRQIYEVEKAVNLLKKFQVLDFTN-PKQ--GVYLDLTLDMTLGKKKKVE 138
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ ++ + + F E + F ++ G A G ++ I+ I +
Sbjct: 139 PFASVLSLPYPF-ISEMSKVAVFTGNASEIKIAEENGAAFAGGTNLIQKILDDEIQA--- 194
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F I P+I+ +L +R LK R P ++G D+ + + +TG++ +K D + ++F
Sbjct: 195 DFYIAVPEIMPELNPLRKKLKTRFPKFNRNSVGRDIPKMLELFKTGLE--IKVDEERENF 252
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
+ I LDM +Q+ NL+ ++ ++ +P + F+ R L S S E L
Sbjct: 253 --LETKIATLDMPSDQIAANLQAVINEVCRQRPLNL---GPFVVRAFLRSSTS-EGLLLK 306
Query: 321 LSGLIEK 327
+ L+ K
Sbjct: 307 IEPLLPK 313
>gi|114594090|ref|XP_517204.2| PREDICTED: 39S ribosomal protein L1, mitochondrial isoform 2 [Pan
troglodytes]
Length = 325
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 103/213 (48%), Gaps = 11/213 (5%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I++ ++A+ +++ + + ++++ K K ++
Sbjct: 82 PEDDVYLKRLYPRQIYEVEKAVHLLKKFQ---ILDFTSPKQSVYLDLTLDMALGKKKNVE 138
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+T ++ + + F E + F ++ G A G + I+ I +
Sbjct: 139 PFTSVLSLPYPF-ASEINKVAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA--- 194
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L R+R L K+ P L ++G D+ + + + G + +K D + ++F
Sbjct: 195 DFYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNG--HEIKVDEERENF 252
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
+ I LDMS +Q+ NL+ ++ ++ +P
Sbjct: 253 LQTK--IATLDMSSDQIAANLQAVINEVCRHRP 283
>gi|156120337|ref|NP_001095314.1| 39S ribosomal protein L1, mitochondrial precursor [Bos taurus]
gi|224493238|sp|A6QPQ5.1|RM01_BOVIN RecName: Full=39S ribosomal protein L1, mitochondrial; Short=L1mt;
Short=MRP-L1; Flags: Precursor
gi|151554261|gb|AAI49434.1| MRPL1 protein [Bos taurus]
gi|296486422|tpg|DAA28535.1| TPA: mitochondrial ribosomal protein L1 precursor [Bos taurus]
Length = 325
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 117/247 (47%), Gaps = 15/247 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I++ ++A+ +++ N P+ G ++++ K K ++
Sbjct: 82 PEDDVYLKRLYPRQIYEVEKAVNLLKKFQVLDFTN-PKQ--GVYLDLTLDMTLGKKKKVE 138
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ ++ + + F E + F ++ G A G ++ I+ I +
Sbjct: 139 PFASVLSLPYPF-ISEMSKVAVFTGNASEIKIAEENGAAFAGGTNLIQKILDDEIQA--- 194
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F I P+I+ +L +R LK R P ++G D+ + + +TG++ +K D + ++F
Sbjct: 195 DFYIAVPEIMPELNPLRKKLKTRFPKFNRNSVGRDIPKMLELFKTGLE--IKVDEERENF 252
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
+ I LDM +Q+ NL+ ++ ++ +P + F+ R L S S E L
Sbjct: 253 --LETKIATLDMPSDQIAANLQAVINEVCRQRPLNL---GPFVVRAFLRSSTS-EGLLLK 306
Query: 321 LSGLIEK 327
+ L+ K
Sbjct: 307 IEPLLPK 313
>gi|312150636|gb|ADQ31830.1| mitochondrial ribosomal protein L1 [synthetic construct]
Length = 303
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I++ ++A+ +++ + P+ + + + +KK ++
Sbjct: 60 PEDDVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLDLTLDMALGKKK--NVE 116
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+T ++ + + F E + F ++ G A G + I+ I +
Sbjct: 117 PFTSVLSLPYPF-ASEINKVAVFTENASEVKIAEENGAASAGGTSLIQKIWDDEIVA--- 172
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L R+R L K+ P L ++G D+ + + + G + +K D + ++F
Sbjct: 173 DFYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNG--HEIKVDEERENF 230
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
+ I LDMS +Q+ NL+ ++ ++ +P
Sbjct: 231 LQT--KIATLDMSSDQIAANLQAVINEVCRHRP 261
>gi|15929352|gb|AAH15109.1| Mitochondrial ribosomal protein L1 [Homo sapiens]
Length = 303
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/213 (22%), Positives = 104/213 (48%), Gaps = 11/213 (5%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I++ ++A+ +++ + P+ + + + +KK ++
Sbjct: 60 PEDDVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLDLTLDMALGKKK--NVE 116
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+T ++ + + F E + F ++ G A G + I+ I +
Sbjct: 117 PFTSVLSLPYPF-ASEINKVAVFTENASEVKIAEENGAASAGGTSLIQKIWDDEIVA--- 172
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L R+R L K+ P L ++G D+ + + + G + +K D + ++F
Sbjct: 173 DFYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNG--HEIKVDEERENF 230
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
+ I LDMS +Q+ NL+ ++ ++ +P
Sbjct: 231 LQT--KIATLDMSSDQIAANLQAVINEVCRHRP 261
>gi|432951343|ref|XP_004084784.1| PREDICTED: 39S ribosomal protein L1, mitochondrial-like [Oryzias
latipes]
Length = 320
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 110/235 (46%), Gaps = 20/235 (8%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIR--ETHHPTMYNLPRAFIGATVEISTTTHQKKVKY 138
P DD+++ K Y ++ EA+ ++ + T +N P +++ +K K
Sbjct: 84 PVDDVFILKYYPRTVYGAAEAIQMLKRFQVLDFTPHNQP-----VYIDLKLDMKLEKKKK 138
Query: 139 MDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMP 198
+DP+ V + H F +R ++ F A + Q+ G A G ++ I+ + ++
Sbjct: 139 IDPFVSTVHLPHPFKTAINR-VLVFTEDPNQAREAQENGAAAAGGAELIQQVLEDEISA- 196
Query: 199 TFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQ 258
F + P+IL L+ ++ L+K+ P K T+ ++ + +TG +Y ++ D
Sbjct: 197 --DFYLAVPEILPKLLPLKNKLRKKFPKSKRGTVSTNIPKTLELFKTGHEYLVESD---- 250
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
Y I L+M+ EQ+ NL+ +L D+ + +PPS FI R ++ S S
Sbjct: 251 --CYIRTQIATLNMTTEQISGNLQTVLMDVCSHRPPSA---GPFIERAIMASHTS 300
>gi|426231914|ref|XP_004009982.1| PREDICTED: 39S ribosomal protein L1, mitochondrial [Ovis aries]
Length = 325
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 116/247 (46%), Gaps = 15/247 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL+ Y +I++ ++A+ +++ N P+ G ++++ K K ++
Sbjct: 82 PEDDVYLKHLYPRQIYEVEKAVHLLKKFQVLDFTN-PKQ--GVYLDLTLDMTLGKKKKVE 138
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+T ++ + + F E + F ++ G A G ++ I+ I +
Sbjct: 139 PFTSVLSLPYPFI-SEMSKVAVFTENASEIKIAEENGAAFAGGTNLIQKILDDEIQA--- 194
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L +R LK R P ++G D+ + + +TG++ +K D + ++F
Sbjct: 195 DFYVAVPEIMPELNALRKKLKTRFPKFNRNSVGRDIPKMLELFKTGLE--IKVDEERENF 252
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
+ I LDM + + NL+ I+ ++ +P + F+ R L S S E L
Sbjct: 253 --LETKIATLDMPSDHIAANLQAIINEVCRQRPLNL---GPFVVRAFLRSSTS-EGLLLK 306
Query: 321 LSGLIEK 327
+ L+ K
Sbjct: 307 IEPLLPK 313
>gi|166796127|gb|AAI58990.1| LOC548880 protein [Xenopus (Silurana) tropicalis]
Length = 339
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 16/237 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
P DD+Y+ + Y + + + A+ ++ T + + + VE+ +K K +D
Sbjct: 91 PNDDVYVARYYPKPLLEVKTAIDMLK-TFQKLDFTYEKQPV--YVELKLDMKLEKKKKVD 147
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ + + F E++ + F + A +D G A VG S+ I+ I +
Sbjct: 148 PFVGYLRYPYPFTTDENK-VFMFTENPDDAQIAKDNGAAFVGGSEFIQQILDDEIQA--- 203
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F I P+I+ L ++ L+K+ P K ++G D+ + + +TG +Y ++K+
Sbjct: 204 DFYIATPEIVPKLTPLKNKLRKKFPKSKRGSVGRDIPKMLQLFKTGHEYLVEKE------ 257
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKF 317
I LDM +E + NL ++ D T +P S F+ R++L S S F
Sbjct: 258 CLVKTKIATLDMPKEHITANLDALIKDTCTYRPLSY---GPFVERVILTSATSEALF 311
>gi|48146499|emb|CAG33472.1| MRPL1 [Homo sapiens]
Length = 303
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 103/213 (48%), Gaps = 11/213 (5%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I++ ++A+ +++ + P+ + + + +K K ++
Sbjct: 60 PEDDVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLDLTLDMALGKK--KNVE 116
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+T ++ + + F E + F ++ G A G + I+ I +
Sbjct: 117 PFTSVLSLPYPF-ASEINKVAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA--- 172
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L R+R L K+ P L ++G + + + + G + +K D + ++F
Sbjct: 173 DFYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRHIPKMLELFKNG--HEIKVDEERENF 230
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
+ I LDMS +Q+ NL+ ++ ++ +P
Sbjct: 231 LQT--KIATLDMSSDQIAANLQAVINEVCRHRP 261
>gi|62859329|ref|NP_001016126.1| mitochondrial ribosomal protein L1 [Xenopus (Silurana) tropicalis]
gi|213624154|gb|AAI70718.1| hypothetical protein LOC548880 [Xenopus (Silurana) tropicalis]
gi|213627720|gb|AAI70720.1| hypothetical protein LOC548880 [Xenopus (Silurana) tropicalis]
Length = 340
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 16/237 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
P DD+Y+ + Y + + + A+ ++ T + + + VE+ +K K +D
Sbjct: 92 PNDDVYVARYYPKPLLEVKTAIDMLK-TFQKLDFTYEKQPV--YVELKLDMKLEKKKKVD 148
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ + + F E++ + F + A +D G A VG S+ I+ I +
Sbjct: 149 PFVGYLRYPYPFTTDENK-VFMFTENPDDAQIAKDNGAAFVGGSEFIQQILDDEIQA--- 204
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F I P+I+ L ++ L+K+ P K ++G D+ + + +TG +Y ++K+
Sbjct: 205 DFYIATPEIVPKLTPLKNKLRKKFPKSKRGSVGRDIPKMLQLFKTGHEYLVEKE------ 258
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKF 317
I LDM +E + NL ++ D T +P S F+ R++L S S F
Sbjct: 259 CLVKTKIATLDMPKEHITANLDALIKDTCTYRPLSY---GPFVERVILTSATSEALF 312
>gi|148225114|ref|NP_001086681.1| mitochondrial ribosomal protein L1 [Xenopus laevis]
gi|50417969|gb|AAH77303.1| Mrpl1-prov protein [Xenopus laevis]
Length = 332
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 16/237 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
P DD+Y+ Y + + A+ ++ T + + + A +++ +KK +D
Sbjct: 92 PTDDVYVACYYPKPLLGVETAIDMLK-TFQKLDFTYEKQPVYAELKLDMKLEKKKK--VD 148
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ ++ + F E ++ F A +D G A VG S+ ++ I +
Sbjct: 149 PFVGYLKYPYPFS-TEANKVLVFTENPGDAQIARDNGAAFVGGSEFVQQILDDEIQA--- 204
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F I P+I+ L ++ L+K+ P K ++G D+ + + +TG +Y ++K+ Q
Sbjct: 205 DFYIATPEIVPKLTPLKNKLRKKFPKSKRGSVGRDIPKMLQLFKTGHEYLVEKECLVQT- 263
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKF 317
I LDM +E + NL ++ DI T +P S F+ R++L S S F
Sbjct: 264 -----KIATLDMPREHIAANLDAVIKDICTYRPLSY---GPFVERVILTSATSEALF 312
>gi|67867476|gb|AAH98087.1| LOC548880 protein, partial [Xenopus (Silurana) tropicalis]
Length = 338
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 107/237 (45%), Gaps = 16/237 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
P DD+Y+ + Y + + + A+ ++ T + + + VE+ +K K +D
Sbjct: 90 PNDDVYVARYYPKPLLEVKTAIDMLK-TFQKLDFTYEKQPV--YVELKLDMKLEKKKKVD 146
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ + + F E++ + F + A +D G A VG S+ I+ I +
Sbjct: 147 PFVGYLRYPYPFTTDENK-VFMFTENPDDAQIAKDNGAAFVGGSEFIQQILDDEIQA--- 202
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F I P+I+ L ++ L+K+ P K ++G D+ + + +TG +Y ++K+
Sbjct: 203 DFYIATPEIVPKLTPLKNKLRKKFPKSKRGSVGRDIPKMLQLFKTGHEYLVEKE------ 256
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKF 317
I LDM +E + NL ++ D T +P S F+ R++L S S F
Sbjct: 257 CLVKTKIATLDMPKEHITANLDALIKDTCTYRPLSY---GPFVERVILTSATSEALF 310
>gi|444723277|gb|ELW63936.1| 39S ribosomal protein L1, mitochondrial [Tupaia chinensis]
Length = 325
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I++ +A+ +++ + P+ + + + + QKK ++
Sbjct: 82 PEDDVYLKRLYPRQIYEVDKAIHLLKK-FQVLDFTSPKQGVYLDLTLDMSLGQKK--KVE 138
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ ++ + + F E + + F ++ G A G ++ I+ I V
Sbjct: 139 PFASVLSLPYPFT-SEIKKVAVFTGNASEIEIAEENGAAFAGGTNLIQKILDDEVHA--- 194
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L +R LKKR P L ++ D+ + + +TG + + D + ++F
Sbjct: 195 DFYVAVPEIMPELNPLRKKLKKRFPRLIRNSISRDIPKMLELFKTG--HEINVDEERENF 252
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+ I LDMS +Q+ NL+ ++ ++ +P S F+ R L S S
Sbjct: 253 --LETKIATLDMSGDQIAANLQAVINEVCRHRPLSL---GPFVVRAFLRSSTS 300
>gi|260816576|ref|XP_002603046.1| hypothetical protein BRAFLDRAFT_130643 [Branchiostoma floridae]
gi|229288362|gb|EEN59058.1| hypothetical protein BRAFLDRAFT_130643 [Branchiostoma floridae]
Length = 323
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 115/245 (46%), Gaps = 15/245 (6%)
Query: 80 YPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYM 139
YP DD+Y + Y +E +R + P ++ ++++ +KK +
Sbjct: 76 YPTDDVYHIRYYPWNPIPLEECFQQMRRAAE-LEFRKPDIWVQISLQLDMKLEKKK--KV 132
Query: 140 DPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPT 199
+P+ V + H+ E + I+ F + + + G +VG + I+ I + V
Sbjct: 133 EPFVGSVHLPHTI--TEPKKILVFATDSDDVEDAKKCGAHIVGGLELIQEILQDKVD--- 187
Query: 200 FQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYS---MKKDPQ 256
F + + P ++ DL ++ L+K+ P K T+G D+ + G KYS P
Sbjct: 188 FDYCVSVPSLIPDLQVLKKKLQKKFPKKKRDTVGHDIPFMVDLWSRGQKYSALTYPNKPT 247
Query: 257 EQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPE- 315
++ G+ + IGRLDM+ EQL +N+ ++ + T KP F+TR L+ ++ +P
Sbjct: 248 QEGKGHVNVIIGRLDMTDEQLTENIDCMIKAVCTHKP---LHFGSFVTRALVHAKGTPAY 304
Query: 316 KFKLD 320
KF+++
Sbjct: 305 KFQVE 309
>gi|10437178|dbj|BAB15005.1| unnamed protein product [Homo sapiens]
Length = 248
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 103/213 (48%), Gaps = 11/213 (5%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PED++YL++ Y +I++ ++A+ +++ + P+ + + + +KK ++
Sbjct: 5 PEDNVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLDLTLDMALGKKK--NVE 61
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+T ++ + + F E + F ++ G A G + I+ I +
Sbjct: 62 PFTSVLSLPYPF-ASEINKVAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA--- 117
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L R+R L K+ P L ++G D+ + + + G + +K D + ++F
Sbjct: 118 DFYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNG--HEIKVDEERENF 175
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
+ I LDMS Q+ NL+ ++ ++ +P
Sbjct: 176 LQT--KIATLDMSSGQIAANLQAVINEVCRHRP 206
>gi|395542021|ref|XP_003772933.1| PREDICTED: 39S ribosomal protein L1, mitochondrial [Sarcophilus
harrisii]
Length = 326
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 145/320 (45%), Gaps = 38/320 (11%)
Query: 21 SEVVSFHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIYASRKVDESNLTY 80
S V+ H A +YAA K + K+G KV+T K T D +K K TY
Sbjct: 31 SCFVNVHAAKRHYAAAKPAKKEKKGSKVQTSNAK---TDDIEKIK-----------TYTY 76
Query: 81 ----PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPR--AFIGATVEISTTTHQK 134
PEDD+YL++ Y +I++ +A+ +++ Y+ P+ ++ T+++S +K
Sbjct: 77 MEGEPEDDVYLKRLYPRQIYEVNKAIDLLKK-FQILDYSNPKQGVYLDLTLDMSLEKKKK 135
Query: 135 KVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGL 194
KV +P+ + + F ++ I+ F + ++ G A G S I+ I
Sbjct: 136 KV---EPFVSAINFPYPFTSNMNK-ILVFTEKDSDIKIAEENGAAFAGGSALIQKILGDE 191
Query: 195 VTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKD 254
+ F + P+++ + +R LKK+ P L ++ D++ + + +T + + D
Sbjct: 192 IQA---DFYVTVPEMMPAIQPLRRKLKKKFPRLLQNSMSHDIVKMLEFFKTA--HEIAVD 246
Query: 255 PQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+ +F + + LDM ++ NL+ + D+ KP S F+ R L S S
Sbjct: 247 EERGNFLKT--QVAVLDMPNNEIIANLQAVFTDVCRHKPQS---SGPFVVRAFLRSSTS- 300
Query: 315 EKFKLDLSGLI--EKPKAKE 332
E L L+ EK KA+E
Sbjct: 301 EGLLLKTEHLLPQEKVKAEE 320
>gi|56269447|gb|AAH86850.1| LOC553284 protein [Danio rerio]
Length = 320
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQK--KVKY 138
P DD+Y+ + Y +++ A+ ++ + L + + I+ + K K +
Sbjct: 87 PVDDVYMVRYYPRPLYELTVAIDMLK-----SFQKLDFSAENQPIYINLRLNMKLEKKRK 141
Query: 139 MDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMP 198
+DP+ + + H F ++ ++ F + + A + G A+ G ++ E+ L
Sbjct: 142 LDPFVRTIHLPHPFKSDINK-VVVFTEKPDQARIALENGAAVAGG---VELFEKILADEI 197
Query: 199 TFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQ 258
T F + P IL L+ ++ L+K+ P K T+G+++ + + +TG +Y + +
Sbjct: 198 TADFYLAEPDILPKLVPLKNKLRKKFPKSKRGTVGINIPRMLELFKTGHEYIV------E 251
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
D Y + + LDM +E + +N+ IL D+++ KP
Sbjct: 252 DI-YVNTEVATLDMPKEHILENIHTILKDVASHKP 285
>gi|323423021|ref|NP_001191062.1| 39S ribosomal protein L1, mitochondrial [Danio rerio]
Length = 316
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 103/215 (47%), Gaps = 18/215 (8%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQK--KVKY 138
P DD+Y+ + Y +++ A+ ++ + L + + I+ + K K +
Sbjct: 83 PVDDVYMVRYYPRPLYELTVAIDMLK-----SFQKLDFSAENQPIYINLRLNMKLEKKRK 137
Query: 139 MDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMP 198
+DP+ + + H F ++ ++ F + + A + G A+ G ++ E+ L
Sbjct: 138 LDPFVRTIHLPHPFKSDINK-VVVFTEKPDQARIALENGAAVAGG---VELFEKILADEI 193
Query: 199 TFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQ 258
T F + P IL L+ ++ L+K+ P K T+G+++ + + +TG +Y + +
Sbjct: 194 TADFYLAEPDILPKLVPLKNKLRKKFPKSKRGTVGINIPRMLELFKTGHEYIV------E 247
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
D Y + + LDM +E + +N+ IL D+++ KP
Sbjct: 248 DI-YVNTEVATLDMPKEHILENIHTILKDVASHKP 281
>gi|344285004|ref|XP_003414254.1| PREDICTED: 39S ribosomal protein L1, mitochondrial-like [Loxodonta
africana]
Length = 325
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 115/233 (49%), Gaps = 14/233 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I++ ++A+ +++ + + P+ G ++++ +K K ++
Sbjct: 82 PEDDVYLRRLYPRQIYEVEKAVHLLKK-YQILDFTYPKQ--GVYLDLTLDMSLQKKKKVE 138
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ ++ + + F E + F ++ G A G + I+ I L
Sbjct: 139 PFASVLSLPYPFT-SEINKVAVFTGNALETKIAEENGAAFAGGTSLIEKI---LADEVHA 194
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+++L ++ LKKR P +++G D+ + + +TG + ++ D + ++F
Sbjct: 195 DFYVAVPEIMSELNPLKKKLKKRFPKSIRKSIGRDIPQMLELFKTG--HEIEVDEERENF 252
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+ I LDMS +Q+ NL+ I+ D+ +P S F+ R L S S
Sbjct: 253 LKTK--IATLDMSSDQIAANLQAIINDVCRHRPLSL---GPFVVRAFLRSSTS 300
>gi|84875532|ref|NP_001034173.1| 39S ribosomal protein L1, mitochondrial isoform 2 [Mus musculus]
gi|12857443|dbj|BAB31013.1| unnamed protein product [Mus musculus]
gi|74192554|dbj|BAE43061.1| unnamed protein product [Mus musculus]
Length = 276
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 87/180 (48%), Gaps = 9/180 (5%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y RI++ ++A+ +++ N P+ G ++++ K K ++
Sbjct: 87 PEDDVYLKRLYPRRIYEVEKAIHLLKKFQVLDFTN-PKQ--GVYLDLTLDMALGKKKTVE 143
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ ++ + H F E + F + ++ G A G +D +K I V +
Sbjct: 144 PFASVIALPHLFS-SEVNKVAVFTANASEIKIAEENGAAFAGGTDLVKKIMDDEVVV--- 199
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L +R LKKR P ++G D+ + + +T + + D + Q+F
Sbjct: 200 DFYVAVPEIMGELNPLRKKLKKRFPKATRNSIGRDIPKMLELFKTA--HEIMVDEERQNF 257
>gi|345327985|ref|XP_001506921.2| PREDICTED: 39S ribosomal protein L1, mitochondrial-like
[Ornithorhynchus anatinus]
Length = 349
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 138/310 (44%), Gaps = 25/310 (8%)
Query: 4 LRSLIFSSSVPRKVFSISEVVSFHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPDSKK 63
+SL FS R + S +V+ YAA ++++++ ++ S K
Sbjct: 38 FQSLGFSRVAHRPALA-SRIVNIKVPIRQYAAAAKSKSKQKPQE-----------KSSGK 85
Query: 64 KKDIYASRKVDESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGA 123
KKD +KV PEDD+YL+ Y +I++ ++A+ +++ + P+ +
Sbjct: 86 KKDAPPKQKVYPFMEGEPEDDVYLKHLYPRQIYEAEKAIHLLKK-FQVLDFTYPKQMVYL 144
Query: 124 TVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGD 183
+ + T +KK K +P++ ++ + F E ++ F + E +D G A G
Sbjct: 145 DLTLEMTPGKKK-KKAEPFSSVLNFPYPFT-SEVNKVLVFSEKAEDIKVAEDNGAAFAGG 202
Query: 184 SDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRL 243
++ I+ I + F + P+I+ L +R LK R P ++G D+ + +
Sbjct: 203 TELIQKILDDEIQA---DFYVAVPEIVLKLNLLRRKLKNRFPKKTRNSIGRDIPKMLELY 259
Query: 244 QTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFI 303
+TG + ++K E+ + I LDM EQ+ NL+ +L D+ K + F+
Sbjct: 260 KTGHEIAVK----EERENFLQTRIATLDMPTEQIVANLQAVLTDVGRHK---QENVGPFV 312
Query: 304 TRILLWSEPS 313
R L S S
Sbjct: 313 ARAFLRSATS 322
>gi|410922485|ref|XP_003974713.1| PREDICTED: 39S ribosomal protein L1, mitochondrial-like [Takifugu
rubripes]
Length = 315
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/254 (22%), Positives = 111/254 (43%), Gaps = 17/254 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
P DD+Y+ + Y I+ EA+ ++ + +++ +K K +D
Sbjct: 79 PVDDVYILRYYPRTIYDVSEAIDMLKTFQR---LDFTPQEQPVYIDLQLNMKLQKKKKVD 135
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
+ V++ H F +R ++ F A + G L G + I+ I ++
Sbjct: 136 AFISTVQLPHLFKTEMNR-VLVFTEDANQAKVAMENGAVLAGGVELIQPILDEEISA--- 191
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F I P+IL L +R L+K+ P ++G+ + + + + G +Y ++ D
Sbjct: 192 DFYIAVPEILNKLAPLRNKLRKKFPKNSRGSVGIRIPKMLELFKYGHEYFVESD------ 245
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
Y I LDM +E + NL+ IL D+ + +P + FI R ++ S S E
Sbjct: 246 CYIRTQIATLDMPKEHIFANLRTILLDVCSHRP---ADMGPFIERAIIASHTS-EALWFK 301
Query: 321 LSGLIEKPKAKELD 334
+++KP A++++
Sbjct: 302 SEDVLQKPAAEKVE 315
>gi|9437517|gb|AAF87327.1|AF212225_1 BM022 [Homo sapiens]
Length = 304
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 108/235 (45%), Gaps = 17/235 (7%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPR--AFIGATVEISTTTHQKKVKY 138
PEDD+YL++ Y +I++ ++A+ +++ + P+ ++G T +K+ +
Sbjct: 60 PEDDVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLGFDTGYGTGKEEKRGAH 118
Query: 139 MDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMP 198
+ + + + F E + F ++ G A G + I+ I +
Sbjct: 119 LPVF---LVCPYPF-ASEINKVAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA- 173
Query: 199 TFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQ 258
F + P+I+ +L R+R L K+ P L ++G D+ + + + G + +K D + +
Sbjct: 174 --DFYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNG--HEIKVDEERE 229
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+F + I LDMS +Q+ NL+ ++ ++ +P + F+ R L S S
Sbjct: 230 NFLQT--KIATLDMSSDQIAANLQAVINEVCRHRPLNL---GPFVVRAFLRSSTS 279
>gi|392404414|ref|YP_006441026.1| LSU ribosomal protein L1P [Turneriella parva DSM 21527]
gi|390612368|gb|AFM13520.1| LSU ribosomal protein L1P [Turneriella parva DSM 21527]
Length = 227
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 78/158 (49%), Gaps = 15/158 (9%)
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVI 204
IV++ H G+ I+ F ++ + A + + G VGD D I+ ++ G V F FV+
Sbjct: 59 IVQLPHG--TGKKVKILVF-AKGDKAEEARAAGADYVGDDDMIQKVQGGWVD---FDFVV 112
Query: 205 CNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFG 261
P ++ D+ ++ +L KR +P KS T+ D+ GI +L +G I+Y K G
Sbjct: 113 ATPDMMKDVGKLGQVLGKRGLMPKPKSGTVTTDMKGIIAQLTSGRIEYRADKT------G 166
Query: 262 YSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPED 299
+GRL + +QL+DN + + I KP D
Sbjct: 167 VVHVPMGRLSFNADQLKDNAEMVFQAILKDKPSDAKGD 204
>gi|189502707|ref|YP_001958424.1| 50S ribosomal protein L1 [Candidatus Amoebophilus asiaticus 5a2]
gi|226724863|sp|B3ETZ3.1|RL1_AMOA5 RecName: Full=50S ribosomal protein L1
gi|189498148|gb|ACE06695.1| hypothetical protein Aasi_1399 [Candidatus Amoebophilus asiaticus
5a2]
Length = 232
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+++ I+ C+ E + ++ G VG D IK IE G V + +I P+I+A +
Sbjct: 70 GKNKRILVLCTP-EKEKEAREAGADHVGLDDYIKKIEEGWVDI---DVIITMPEIMAKVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L R +P K+ T+ V++ + +++G I+Y + K +G +GR+
Sbjct: 126 RLGKILGPRGLMPNPKTGTVTVEIAKAVQAVKSGKIEYKVDK------YGIVHASVGRVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
S+E L DN K +LA + KP S
Sbjct: 180 FSKEALRDNAKELLATLLKAKPAS 203
>gi|334330933|ref|XP_001362330.2| PREDICTED: 39S ribosomal protein L1, mitochondrial-like
[Monodelphis domestica]
Length = 298
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 124/260 (47%), Gaps = 16/260 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRA-FIGATVEISTTTHQKKVKYM 139
PEDD+YL++ + +I++ ++A+ ++ N +A ++ T+++ T +KK K +
Sbjct: 53 PEDDVYLKRLFPRQIYEVEKAVNILKRFQILDYSNPKQAIYLDLTLDM---TLEKKKKKL 109
Query: 140 DPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPT 199
+P+ ++ + + F + +++ F + ++ G A G S I+ I +
Sbjct: 110 EPFASVLNLPYPFT-SKINNVMVFTEKASEIKIAEENGAAFAGGSILIQKILDDEIQA-- 166
Query: 200 FQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQD 259
F + P+++ L +R LKKR P L ++ D++ + + +T + + D + +
Sbjct: 167 -DFYVSVPEMMPALQPLRRKLKKRFPRLSQNSINHDIVKMLEFFKTA--HEIAVDEERGN 223
Query: 260 FGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKL 319
F + I LDM +Q+ NL+ +L ++ KP S F+ R + S S E L
Sbjct: 224 FLTT--QIALLDMPTDQIAANLQVVLTEVCRQKPQS---SGPFVVRAFVRSATS-EGLLL 277
Query: 320 DLSGLIEKPKAKELDTGEEI 339
L+ + K K + +EI
Sbjct: 278 KTEHLLPQEKVKAEENIKEI 297
>gi|383789779|ref|YP_005474353.1| 50S ribosomal protein L1 [Spirochaeta africana DSM 8902]
gi|383106313|gb|AFG36646.1| ribosomal protein L1 [Spirochaeta africana DSM 8902]
Length = 222
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 91/193 (47%), Gaps = 18/193 (9%)
Query: 124 TVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGD 183
TVE++ + KK + V + H F GE + ++ ++ + A + +D G A VGD
Sbjct: 40 TVELAMNLNVKKSTTV---RDTVVLPHQF-TGEKKVLV--FAKGDKAQEARDAGAAYVGD 93
Query: 184 SDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAK 241
D I+ I G + F + P ++ D+ R+ +L +R +P K+QT+ +D+ G
Sbjct: 94 DDLIQKIRDGWM---DFDVAVATPDMMKDVGRLGPILGRRGLMPNPKTQTVTMDVAGALA 150
Query: 242 RLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDED 301
L+ G + + D G +G++ M ++ +N+ +L+++ +P D
Sbjct: 151 ELRKG-RVEFRSDKT----GVVHLAVGKVSMDAAKIAENINLVLSEVEKKRPSDTK--GD 203
Query: 302 FITRILLWSEPSP 314
FI + + S P
Sbjct: 204 FIQTVAVSSTMGP 216
>gi|390442886|ref|ZP_10230685.1| 50S ribosomal protein L1 [Nitritalea halalkaliphila LW7]
gi|389667194|gb|EIM78617.1| 50S ribosomal protein L1 [Nitritalea halalkaliphila LW7]
Length = 232
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVI 204
+V + H G+D ++ C+ + + + G VG D I IE G + +I
Sbjct: 62 VVALPHG--TGKDVRVLVLCTP-DKEEEAKAAGADFVGLDDYIAKIEGGWTDI---DVII 115
Query: 205 CNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
P ++A + R+ +L R +P KS T+ +D+ K ++ G K D + FG
Sbjct: 116 TMPNVMAKVGRLGRVLGPRGLMPNPKSGTVTLDVAKAVKEVKAG-----KIDFKVDKFGI 170
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G++ S E+++DN+K ++A IS +KP S
Sbjct: 171 IHASVGKVSFSPEKIQDNVKELIATISKLKPSS 203
>gi|99032307|pdb|2FTC|A Chain A, Structural Model For The Large Subunit Of The Mammalian
Mitochondrial Ribosome
Length = 189
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 83/179 (46%), Gaps = 11/179 (6%)
Query: 135 KVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGL 194
K K ++P+T ++ + + F E + F ++ G A G + I+ I
Sbjct: 11 KKKNVEPFTSVLSLPYPF-ASEINKVAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDE 69
Query: 195 VTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKD 254
+ F + P+I+ +L R+R L K+ P L ++G D+ + + + G + +K D
Sbjct: 70 IVA---DFYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNG--HEIKVD 124
Query: 255 PQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+ ++F + I LDMS +Q+ NL+ ++ ++ +P + F+ R L S S
Sbjct: 125 EERENFLQT--KIATLDMSSDQIAANLQAVINEVCRHRPLNLGP---FVVRAFLRSSTS 178
>gi|189485235|ref|YP_001956176.1| 50S ribosomal protein L1 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287194|dbj|BAG13715.1| 50S ribosomal protein L1 [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 227
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 101/229 (44%), Gaps = 29/229 (12%)
Query: 95 IFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDP--WTHIVEVEHSF 152
+++ EA+ ++ET +A T+EI +DP +V S
Sbjct: 17 VYKLTEAVILVKET--------AKAKFDETIEIHIKLG------IDPKRSDQMVRGTISI 62
Query: 153 DHGEDRS-IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG R+ IA ++ E + + G ++G D I+ I +G + F ++ P ++
Sbjct: 63 PHGIGRTRKIAVLAKGEKQKEAEAAGADIIGSDDLIEDISKGKLG-SGFDVLVATPDVMK 121
Query: 212 DLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIG 268
DL R+ +L K +P KS T+ ++ + L+ G ++Y + FG +G
Sbjct: 122 DLSRVAKILGPKGLMPNPKSGTVTFEIGKTVEELKKGRVEY------KNDSFGIIHVPVG 175
Query: 269 RLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKF 317
+ +E+LE+N+K +L ++ KP S +I I + S P F
Sbjct: 176 KASFEKEKLENNIKTLLEAVAKAKPLS--SKGQYIKSISISSTMGPGIF 222
>gi|311748524|ref|ZP_07722309.1| ribosomal protein L1 [Algoriphagus sp. PR1]
gi|126577040|gb|EAZ81288.1| ribosomal protein L1 [Algoriphagus sp. PR1]
Length = 232
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 72/153 (47%), Gaps = 13/153 (8%)
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVI 204
+V + H G+D ++ CS + + + G VG D I IE G + +I
Sbjct: 62 VVALPHG--TGKDIKVLVLCSPDKVE-EATEAGADYVGLDDYIAKIEGGWTDI---DVII 115
Query: 205 CNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
P ++A + R+ +L R +P KS T+ +D+ K ++ G K D + FG
Sbjct: 116 TMPNVMAKVGRLGRVLGPRGLMPNPKSGTVTLDVAKAVKEVKAG-----KIDFKVDKFGI 170
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G+ S EQ+E+N K ++ IS +KP S
Sbjct: 171 IHAAVGKASFSAEQIEENAKELIQTISKLKPSS 203
>gi|63996416|gb|AAY41057.1| unknown [Homo sapiens]
Length = 237
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/180 (21%), Positives = 86/180 (47%), Gaps = 9/180 (5%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I++ ++A+ +++ + P+ + + + +KK ++
Sbjct: 60 PEDDVYLKRLYPRQIYEVEKAVHLLKK-FQILDFTSPKQSVYLDLTLDMALGKKK--NVE 116
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+T ++ + + F E + F ++ G A G + I+ I +
Sbjct: 117 PFTSVLSLPYPF-ASEINKVAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVA--- 172
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L R+R L K+ P L ++G D+ + + + G + +K D + ++F
Sbjct: 173 DFYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNG--HEIKVDEERENF 230
>gi|320333433|ref|YP_004170144.1| 50S ribosomal protein L1 [Deinococcus maricopensis DSM 21211]
gi|319754722|gb|ADV66479.1| ribosomal protein L1 [Deinococcus maricopensis DSM 21211]
Length = 231
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 70/153 (45%), Gaps = 20/153 (13%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
+ HG RS+ +A ++ + A+ + G +VG + I ER L F V+ P +
Sbjct: 64 ALPHGTGRSVRVAVITKGDKLAEAEAAGADVVGAEELI---ERILGGYMDFDAVVATPDM 120
Query: 210 -------LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
LA L+ RGLL P KS T+G D+ G+ K L+ G + + D G
Sbjct: 121 MAQVGQKLARLLGPRGLL----PNPKSGTVGPDVAGMVKGLKAG-RIEFRNDKT----GV 171
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ EQL +NL+ ++ + KP S
Sbjct: 172 VHAPIGKASFGAEQLAENLRSLVGALEAAKPGS 204
>gi|428179982|gb|EKX48851.1| hypothetical protein GUITHDRAFT_85967 [Guillardia theta CCMP2712]
Length = 301
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 12/155 (7%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
H++ HG +SI IA + E A + +GV VG D I+ ++ G + F+
Sbjct: 100 HLIRGLVKLPHGNGKSIKIAVFATGEAADAAKRLGVENVGLEDLIEKVKEGKLD---FER 156
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
+ P+ + L I +L R +P K+QT+ D+ K L++G+ + + K
Sbjct: 157 CLATPQAMPKLNSIARILGPRGLMPNPKTQTVTEDIEKGIKDLRSGLVFKVDKA------ 210
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
GY IG++D + EQ+++NL ++ I+ ++P S
Sbjct: 211 GYIHGCIGKIDYTPEQIKENLSVFVSTITDLRPKS 245
>gi|310286765|ref|YP_003938023.1| 50S ribosomal protein L1 [Bifidobacterium bifidum S17]
gi|311063662|ref|YP_003970387.1| 50S ribosomal protein L1 [Bifidobacterium bifidum PRL2010]
gi|313139466|ref|ZP_07801659.1| 50S ribosomal protein L1 [Bifidobacterium bifidum NCIMB 41171]
gi|390936119|ref|YP_006393678.1| 50S ribosomal protein L1 [Bifidobacterium bifidum BGN4]
gi|421734773|ref|ZP_16173830.1| 50S ribosomal protein L1 [Bifidobacterium bifidum LMG 13195]
gi|421736746|ref|ZP_16175502.1| 50S ribosomal protein L1 [Bifidobacterium bifidum IPLA 20015]
gi|309250701|gb|ADO52449.1| large subunit ribosomal protein L1 [Bifidobacterium bifidum S17]
gi|310865981|gb|ADP35350.1| RlpA LSU ribosomal protein L1P [Bifidobacterium bifidum PRL2010]
gi|313131976|gb|EFR49593.1| 50S ribosomal protein L1 [Bifidobacterium bifidum NCIMB 41171]
gi|389889732|gb|AFL03799.1| ribosomal protein L1 [Bifidobacterium bifidum BGN4]
gi|407077295|gb|EKE50144.1| 50S ribosomal protein L1 [Bifidobacterium bifidum LMG 13195]
gi|407295963|gb|EKF15589.1| 50S ribosomal protein L1 [Bifidobacterium bifidum IPLA 20015]
Length = 230
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 85/175 (48%), Gaps = 15/175 (8%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V + HG ++ +A ++ A + + G +VGD D I+ ++ G + F
Sbjct: 57 QLVRGTVNLPHGTGKTAKVAVFARGPKATEAVEAGADIVGDDDLIEKVQNGFLD---FDA 113
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQD 259
V+ P ++ + R+ +L R +P K+ T+ +D+ K ++ G I++ + K+
Sbjct: 114 VVATPDMMGKVGRLGRVLGPRGLMPNPKTGTVTMDVTKAVKDIKGGKIEFRVDKN----- 168
Query: 260 FGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
G F IG+L + L++N K + ++ +KP + +IT++ + S +P
Sbjct: 169 -GNLSFLIGKLSFDETALDENFKAVADEVKRLKPAT--VKGRYITKVTITSTMNP 220
>gi|325972671|ref|YP_004248862.1| 50S ribosomal protein L1 [Sphaerochaeta globus str. Buddy]
gi|324027909|gb|ADY14668.1| ribosomal protein L1 [Sphaerochaeta globus str. Buddy]
Length = 229
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/223 (24%), Positives = 96/223 (43%), Gaps = 26/223 (11%)
Query: 94 RIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFD 153
+++ F+EA A +++ A TVEIS KK + + V + H F
Sbjct: 18 KLYTFEEASALVKDVAF--------AKFDETVEISVKLTLKKSQSV---RDTVVLPHQF- 65
Query: 154 HGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADL 213
+ ++ F + E A + + G A VGD D I+ I G + F + P ++ D+
Sbjct: 66 -SAQKRVLVFA-KGEKAEEARQAGAAFVGDDDLIEKIRGGWMD---FDVAVATPDMMKDV 120
Query: 214 MRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L +R +P K+QT+ DL L G + + D +G++
Sbjct: 121 GRLGPILGRRGLMPNPKTQTVTFDLKAALAELTKG-RVEFRSDKTN----VIHIAVGKIS 175
Query: 272 MSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
M +++ +N + ++ +I KP DF+ I L S P
Sbjct: 176 MDADKVSENARVVVKEIIRKKPSDAK--ADFVVSIALSSTMGP 216
>gi|317153967|ref|YP_004122015.1| 50S ribosomal protein L1 [Desulfovibrio aespoeensis Aspo-2]
gi|316944218|gb|ADU63269.1| ribosomal protein L1 [Desulfovibrio aespoeensis Aspo-2]
Length = 235
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D ++ FC + E A+ + G G D ++ I+ G + F + P ++A +
Sbjct: 70 GKDVRVVVFC-KSEKIAEAKAAGADYAGSDDLVEKIQGGWLD---FDKAVATPDMMALVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
+I LL R +P K+ T+ +D++ L+ G K K D G IG++
Sbjct: 126 KIGRLLGPRGLMPNAKTGTVTMDVVKAVSELKAG-KVEFKVDKA----GVLHAPIGKVSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
E+L +NLK +LA I MKP S
Sbjct: 181 GTEKLCENLKTLLAQIMRMKPSS 203
>gi|165977155|ref|YP_001652748.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
gi|226724861|sp|B0BSE7.1|RL1_ACTPJ RecName: Full=50S ribosomal protein L1
gi|165877256|gb|ABY70304.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar 3
str. JL03]
Length = 229
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 19/147 (12%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R+ +A +Q E A + G LVG D + I++G F VI +P D
Sbjct: 67 HGTGRTARVAVFTQGENAEAAKAPGADLVGMEDLAEQIKKG---EKNFDVVIPSP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
MR+ G L + IP LK T+ +++ K ++G + P+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLIPNLKVGTVTPNVVEAVKNAKSG-----QIRPRNAKNGIIHTT 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKP 293
IG+ D + EQL+DNL +LA ++ KP
Sbjct: 175 IGKADFAPEQLKDNLVALLAALNKAKP 201
>gi|395213855|ref|ZP_10400357.1| 50S ribosomal protein L1 [Pontibacter sp. BAB1700]
gi|394456592|gb|EJF10874.1| 50S ribosomal protein L1 [Pontibacter sp. BAB1700]
Length = 230
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVI 204
IV + H G+D ++A + + + +D G VG D I+ IE+G + +I
Sbjct: 62 IVTLPHG--TGKDVKVLALVTPDKEQ-EAKDAGADFVGLDDYIQKIEKGWTDV---DVII 115
Query: 205 CNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
P ++A + R+ +L R +P KS T+ D+ K ++ G K D + +G
Sbjct: 116 TMPAVMAKVGRLGRILGPRNLMPNPKSGTVTQDVAKAVKEVKAG-----KIDFKVDKYGI 170
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+G++ S EQL N ++A ++ +KP S +I I L S SP
Sbjct: 171 IHTSVGKVSFSPEQLAANAAEVIATLNRLKPSS--AKGTYIKSITLSSTMSP 220
>gi|229817146|ref|ZP_04447428.1| hypothetical protein BIFANG_02405 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
gi|229784935|gb|EEP21049.1| hypothetical protein BIFANG_02405 [Bifidobacterium angulatum DSM
20098 = JCM 7096]
Length = 229
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 98/231 (42%), Gaps = 46/231 (19%)
Query: 69 ASRKVDESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEIS 128
A+ KVD +NL P+ I L K R F EA+ A+ +
Sbjct: 11 AAEKVDRNNLYTPDQAIALLKSMPTR--NFDEAVEAVVRLN------------------- 49
Query: 129 TTTHQKKVKYMDP--WTHIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSD 185
+DP +V S +G +++ + ++ A Q+ G +VGD D
Sbjct: 50 ----------VDPRKADQLVRGTVSLPNGTGKTVKVLVFARGPQATAAQEAGADIVGDDD 99
Query: 186 TIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRL 243
I ++ G + F V+ P ++ + R+ +L R +P K+ T+ +D+ K +
Sbjct: 100 LIAKVQGGFLD---FDSVVATPDMMGKVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVKDI 156
Query: 244 QTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
+ G I++ + K+ G F +G++ ++ L++N + +I +KP
Sbjct: 157 KGGKIEFRVDKN------GNLSFLVGKVSFDEKALDENFHAVADEIKRLKP 201
>gi|257784975|ref|YP_003180192.1| 50S ribosomal protein L1 [Atopobium parvulum DSM 20469]
gi|257473482|gb|ACV51601.1| ribosomal protein L1 [Atopobium parvulum DSM 20469]
Length = 235
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 44/232 (18%)
Query: 69 ASRKVDESNLTYPEDDIYLQKDYKLRIFQFQEAL-AAIRETHHPTMYNLPRAFIGATVEI 127
A KVD SNL P++ + L K+ L +F E + AIR + +
Sbjct: 11 AVAKVDGSNLYSPKEAVTLAKE--LATAKFDETIEVAIR------------------LGV 50
Query: 128 STTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDT 186
T + V+ S HG +S+ +A ++ E A + + G +VG +
Sbjct: 51 DTRKADQNVRG----------SISLPHGTGKSVRVAVFAEGEKAREAEAAGADIVGGDEL 100
Query: 187 IKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQ 244
I +E+G++ F I P+++ + R+ +L R +P K T+ +D+ + L+
Sbjct: 101 IAEVEKGMLD---FDAAIATPQMMGKVGRLGRVLGPRGLMPNPKLGTVTMDVEKMVNELK 157
Query: 245 TG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
G ++Y + FG IG+ +QL +N ++++I +KP S
Sbjct: 158 AGRVEYRADR------FGICHVAIGKASFEVQQLVENYGALISEIIRVKPSS 203
>gi|403225154|gb|AFR24766.1| 50S ribosomal protein L1 [uncultured Pelagomonas]
Length = 231
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 10/141 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D I S L G A+VG D I+ I +G + F ++ P ++ L
Sbjct: 69 GKDIKISILTSDTSNTDTLMQNGAAVVGSDDLIEDISKGNLD---FDLLLTTPDMMPRLT 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
++ +L R +P+ K+ T+ DLI + G K + + G + G++D
Sbjct: 126 KLGKVLGPRGLMPSTKAGTVTTDLIASLAEFKAG-----KVECRADKTGVAHILFGKMDF 180
Query: 273 SQEQLEDNLKRILADISTMKP 293
++E L +NL+ + I T KP
Sbjct: 181 TEEALHENLRSVYDSIQTNKP 201
>gi|374316483|ref|YP_005062911.1| 50S ribosomal protein L1 [Sphaerochaeta pleomorpha str. Grapes]
gi|359352127|gb|AEV29901.1| ribosomal protein L1 [Sphaerochaeta pleomorpha str. Grapes]
Length = 229
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 26/221 (11%)
Query: 96 FQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHG 155
+ F EA A ++E A TVE+S KK + + V + + F
Sbjct: 20 YSFNEAAALVKEVAF--------AKFDETVELSVKLSLKKSQSV---RDTVVLPNQFSAL 68
Query: 156 EDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMR 215
+ ++ F ++ E A + +D G A VGD D I+ I G + F + P ++ D+ R
Sbjct: 69 --KRVLVF-AKGEKAQEARDNGAAFVGDDDLIEKIRGGWLD---FDVAVATPDMMKDVGR 122
Query: 216 IRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+ +L ++ +P K+QT+ DL G L G + + D IG++ M
Sbjct: 123 LGPILGRKGLMPNPKTQTVTFDLKGALAELTKG-RVEFRSDKTN----VVHLPIGKVSMD 177
Query: 274 QEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
++ +N ++ +I KP DFI + L S P
Sbjct: 178 AAKVSENAVAVVKEIIRKKPAD--AKADFIVSVALSSTMGP 216
>gi|189499296|ref|YP_001958766.1| 50S ribosomal protein L1 [Chlorobium phaeobacteroides BS1]
gi|189494737|gb|ACE03285.1| ribosomal protein L1 [Chlorobium phaeobacteroides BS1]
Length = 229
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 78/163 (47%), Gaps = 15/163 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ S++ CS+ + A++ Q+ G VG D I+ I+ G + +I P ++ L
Sbjct: 68 GKTVSVLVICSEAK-ASEAQEAGADFVGFEDYIEKIQNGWTDV---DVIIATPDVMGKLG 123
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L R +P KS T+ +D+ K ++ G I++ + K G +G++
Sbjct: 124 KVGKILGPRGLMPNPKSGTVTMDVAKAVKEVKAGKIEFRVDK------AGNVHAPVGKVS 177
Query: 272 MSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
S EQL +N L +I +KP + +I I + S SP
Sbjct: 178 FSSEQLFENATSFLKEIVRLKPAA--AKGHYIRNISVSSTMSP 218
>gi|239618205|ref|YP_002941527.1| 50S ribosomal protein L1 [Kosmotoga olearia TBF 19.5.1]
gi|259646161|sp|C5CGE2.1|RL1_KOSOT RecName: Full=50S ribosomal protein L1
gi|239507036|gb|ACR80523.1| ribosomal protein L1 [Kosmotoga olearia TBF 19.5.1]
Length = 231
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 82/179 (45%), Gaps = 14/179 (7%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S HG +++ + ++ E + + G VG + I+ I++G F I P +
Sbjct: 64 SLPHGTGKNVKVLVFTRGEKVEEAKAAGADFVGSDELIQQIQKGWTD---FDVAIATPDM 120
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHI 267
+ ++ R+ +L R +P+ K+ T+ D+ K + G + +K D G F I
Sbjct: 121 MREIGRLGRILGPRGLMPSPKAGTVTTDVAEAVKAFKAG-RVEIKNDKT----GNLHFPI 175
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLIE 326
G+ E+L++NL L IS MKP + FI ++++ P KLD ++E
Sbjct: 176 GKKSFDSEKLKENLVSALEQISKMKPAA--AKGRFIVKVVVAPTMGP-GIKLDHQKVVE 231
>gi|444727944|gb|ELW68417.1| 39S ribosomal protein L1, mitochondrial [Tupaia chinensis]
Length = 202
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 87/191 (45%), Gaps = 12/191 (6%)
Query: 137 KYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVT 196
K ++P+ ++ + + F E + + F ++ G A G ++ I+ I V
Sbjct: 7 KNVEPFASVLSLPYPFTL-EIKKVAVFTKNPSETEIAEENGAAFAGGTNLIQKILDDEVH 65
Query: 197 MPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQ 256
F + P+I+ +L +R LKKR P L + D+ + + +TG + + D +
Sbjct: 66 A---DFYVAVPEIMPELNPLRKKLKKRFPRLIRNSTSCDIPKMLELFKTG--HEINVDEE 120
Query: 257 EQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEK 316
++F + I LDMS +Q+ NL+ ++ ++ +P S F+ R L S S E
Sbjct: 121 RENF--LETKIATLDMSSDQIAANLQAVINEVCRHRPLSL---GPFVVRAFLRSSTS-EG 174
Query: 317 FKLDLSGLIEK 327
L + L+ K
Sbjct: 175 LLLKIDPLLPK 185
>gi|88607420|ref|YP_505586.1| 50S ribosomal protein L1 [Anaplasma phagocytophilum HZ]
gi|123494573|sp|Q2GJ65.1|RL1_ANAPZ RecName: Full=50S ribosomal protein L1
gi|88598483|gb|ABD43953.1| ribosomal protein L1 [Anaplasma phagocytophilum HZ]
Length = 216
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 70/140 (50%), Gaps = 15/140 (10%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A ++ E A Q +D G +VGDSD I+ I++G F + I P ++ + I +L
Sbjct: 62 VAVLAKGEYAKQAKDAGADVVGDSDLIEEIKKG--RKLDFDWCIATPDFMSQVSAIAKIL 119
Query: 221 KKR--IPTLKSQTLGVD---LIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQE 275
R +P K T+ D ++GI K Q +++ K +G IG + S+E
Sbjct: 120 GPRGLMPNPKFGTVTFDIAKMVGIVKSGQ--VRFRSDK------YGIVHVKIGDVGFSRE 171
Query: 276 QLEDNLKRILADISTMKPPS 295
L +NL+ +++ + +KP +
Sbjct: 172 DLMENLRAVVSAVQGLKPAT 191
>gi|390943295|ref|YP_006407056.1| 50S ribosomal protein L1 [Belliella baltica DSM 15883]
gi|390416723|gb|AFL84301.1| ribosomal protein L1 [Belliella baltica DSM 15883]
Length = 232
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVI 204
+V + H G+D ++ C+ + A+ ++ G VG D I IE G + +I
Sbjct: 62 VVALPHG--TGKDVKVLVLCTP-DKEAEAKEAGADYVGLDDYIAKIEGGWTDI---DVII 115
Query: 205 CNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
P ++A + R+ +L R +P KS T+ +++ K ++ G K D + FG
Sbjct: 116 TMPNVMAKVGRLGRVLGPRGLMPNPKSGTVTLEVGKAVKEVKAG-----KIDFKVDKFGI 170
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + EQ+++N K ++ IS +KP S
Sbjct: 171 IHAGIGKASFTPEQIQENAKELINTISKLKPTS 203
>gi|384915712|ref|ZP_10015923.1| 50S ribosomal protein L1 [Methylacidiphilum fumariolicum SolV]
gi|384526908|emb|CCG91794.1| 50S ribosomal protein L1 [Methylacidiphilum fumariolicum SolV]
Length = 239
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S HG +S+ IA ++ A ++ G VG D IK ++ G F I P
Sbjct: 72 SLPHGSGKSMKIAVFAKGSAAESAKEAGADYVGYEDLIKKVQEGFTD---FDVAIATPDA 128
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHI 267
+ ++ ++ +L R +P ++ T+ D++G K + G K K D ++ H+
Sbjct: 129 MQEVRKLGKILGPRGLMPNPRTGTVTEDVVGAIKEFRKG-KVEFKVDKT------ANLHV 181
Query: 268 --GRLDMSQEQLEDNLKRILADISTMKPPS 295
G+ E L DN+K I+ ++ KP S
Sbjct: 182 VAGKASFPNEALGDNIKAIVEAVAKAKPHS 211
>gi|297292650|ref|XP_001087637.2| PREDICTED: hypothetical protein LOC699164 [Macaca mulatta]
Length = 343
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 174 QDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLG 233
++ G A G + I+ I + + F + P+I+ +L R+R L KR P + ++G
Sbjct: 190 EENGAAFAGGTSLIQKIWDDEIVV---DFYVAVPEIMPELNRLRKKLGKRFPRVSRNSIG 246
Query: 234 VDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
D+ + + + G + +K D + ++F + I RLDMS +Q+ NL+ ++ ++ +P
Sbjct: 247 RDIPKMLEFFKNG--HEIKVDEERENFLQT--KIARLDMSSDQIAANLQAVINEVCRHRP 302
>gi|90962213|ref|YP_536129.1| 50S ribosomal protein L1 [Lactobacillus salivarius UCC118]
gi|227891219|ref|ZP_04009024.1| 50S ribosomal protein L1 [Lactobacillus salivarius ATCC 11741]
gi|417788568|ref|ZP_12436251.1| LSU ribosomal protein L1p (L10Ae) [Lactobacillus salivarius
NIAS840]
gi|418961721|ref|ZP_13513606.1| 50S ribosomal protein L1 [Lactobacillus salivarius SMXD51]
gi|122448741|sp|Q1WST3.1|RL1_LACS1 RecName: Full=50S ribosomal protein L1
gi|90821407|gb|ABE00046.1| LSU ribosomal protein L1P [Lactobacillus salivarius UCC118]
gi|227867093|gb|EEJ74514.1| 50S ribosomal protein L1 [Lactobacillus salivarius ATCC 11741]
gi|334308745|gb|EGL99731.1| LSU ribosomal protein L1p (L10Ae) [Lactobacillus salivarius
NIAS840]
gi|380343816|gb|EIA32164.1| 50S ribosomal protein L1 [Lactobacillus salivarius SMXD51]
Length = 230
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D++++ F ++ A + +D G +VGD D + I+ G + F I P ++A +
Sbjct: 71 GKDQTVVVF-AKGAKAQEAKDAGADVVGDDDLVARIQDGWL---DFDVAIATPDMMAQVG 126
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L K +P K+ T+ +D+ ++G + Y +D G +G++
Sbjct: 127 RLGRVLGPKGLMPNPKTGTVTMDVTKAVTDAKSGQVTYRTDRD------GNVHVPLGKVS 180
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
++E LE N K + I+ +P S
Sbjct: 181 FTEEALEGNFKAVYDVIAKARPAS 204
>gi|441499863|ref|ZP_20982035.1| LSU ribosomal protein L1p (L10Ae) [Fulvivirga imtechensis AK7]
gi|441436323|gb|ELR69695.1| LSU ribosomal protein L1p (L10Ae) [Fulvivirga imtechensis AK7]
Length = 234
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 13/153 (8%)
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVI 204
+V + H G+D ++ C+ + + +D G VG D IK IE G + +I
Sbjct: 62 VVTLPHG--TGKDLKVLVLCTP-DKEQEAKDAGADYVGLDDYIKKIEEGWTDI---DVII 115
Query: 205 CNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
P ++A + R+ +L R +P KS T+ +++ K ++ G K D + FG
Sbjct: 116 TMPTVMAKVGRLGRVLGPRGLMPNPKSGTVTLEVGKAVKDIKAG-----KIDFKVDKFGI 170
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G+ + ++++DN++ ++ IS +KP S
Sbjct: 171 IHVSVGKASFTPDKIKDNVQEMIQTISKLKPAS 203
>gi|417809922|ref|ZP_12456603.1| 50S ribosomal protein L1 [Lactobacillus salivarius GJ-24]
gi|335350846|gb|EGM52342.1| 50S ribosomal protein L1 [Lactobacillus salivarius GJ-24]
Length = 230
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D++++ F ++ A + +D G +VGD D + I+ G + F I P ++A +
Sbjct: 71 GKDQTVVVF-AKGAKAQEAKDAGTDVVGDDDLVARIQDGWL---DFDVAIATPDMMAQVG 126
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L K +P K+ T+ +D+ ++G + Y +D G +G++
Sbjct: 127 RLGRVLGPKGLMPNPKTGTVTMDVTKAVTDAKSGQVTYRTDRD------GNVHVPLGKVS 180
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
++E LE N K + I+ +P S
Sbjct: 181 FTEEALEGNFKAVYDVIAKARPAS 204
>gi|224007221|ref|XP_002292570.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971432|gb|EED89766.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 170
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 13/150 (8%)
Query: 151 SFDHGEDR--SIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
S HG + S+ F A Q G A+ G + I+ I+ G V++ +FQ I +P+
Sbjct: 27 SLPHGNGKKFSVAVFTDDASIADQALSRGAAVAGGASLIESIKNGQVSLTSFQRTIASPE 86
Query: 209 ILADLMRIRGLLKKR--IPTLKSQTLGVD--LIGIAKRLQTGI-KYSMKKDPQEQDFGYS 263
++ L I LL R +P K T+ L+ Q+GI Y K+ G
Sbjct: 87 MMPQLSSIARLLGPRGLMPNPKLNTIQPKEMLLQTLDEQQSGISNYRTDKE------GIV 140
Query: 264 DFHIGRLDMSQEQLEDNLKRILADISTMKP 293
+GR +++L DN++ ++ +I +KP
Sbjct: 141 RIGVGRGSFGKDKLMDNVRELMNEIQGVKP 170
>gi|139438534|ref|ZP_01772050.1| Hypothetical protein COLAER_01048 [Collinsella aerofaciens ATCC
25986]
gi|133776073|gb|EBA39893.1| ribosomal protein L1 [Collinsella aerofaciens ATCC 25986]
Length = 237
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 72/149 (48%), Gaps = 13/149 (8%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S HG +++ +A ++ E A + + G ++G + + I++G + F I P +
Sbjct: 66 SLPHGTGKTVRVAVFAEGEKAREAEAAGADIIGSDELVAQIQKGEIN---FDAAIATPNM 122
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
+A + RI +L R +P K T+ +D+ + L+ G ++Y + +G
Sbjct: 123 MAKVGRIGKILGPRGLMPNPKLGTVTMDVAKMVSELKAGRVEYRADR------YGICHVP 176
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G+ S++QL +N + +I +KP S
Sbjct: 177 LGKKSFSEQQLVENYAALYTEILRVKPSS 205
>gi|13507959|ref|NP_109908.1| 50S ribosomal protein L1 [Mycoplasma pneumoniae M129]
gi|377822532|ref|YP_005175458.1| 50S ribosomal protein L1 [Mycoplasma pneumoniae 309]
gi|385326813|ref|YP_005881245.1| 50S ribosomal protein L1 [Mycoplasma pneumoniae FH]
gi|2500219|sp|P78035.1|RL1_MYCPN RecName: Full=50S ribosomal protein L1
gi|1674313|gb|AAB96259.1| ribosomal protein L1 [Mycoplasma pneumoniae M129]
gi|301633166|gb|ADK86720.1| ribosomal protein L1 [Mycoplasma pneumoniae FH]
gi|358640500|dbj|BAL21794.1| 50S ribosomal protein L1 [Mycoplasma pneumoniae 309]
gi|440453386|gb|AGC04145.1| Ribosomal protein L1 [Mycoplasma pneumoniae M129-B7]
Length = 226
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 94/206 (45%), Gaps = 23/206 (11%)
Query: 92 KLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHS 151
K +++ QEA+ +++T T +N I ++ + TT +++++ + H V
Sbjct: 17 KTKLYPLQEAVDLVKKTSI-TKFN-GSVDIAVSLNLDTTKAEQQLRGAIAFPHSV----- 69
Query: 152 FDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
G+ I+A + A + G VG D I I+ G + F +I +PK +A
Sbjct: 70 ---GKPIRILAITDDEKAALE---AGADFVGGIDKINDIKNGWLD---FDLIITSPKFMA 120
Query: 212 DLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGR 269
L ++ LL K +P K++T+ D+ + + G KK+ + FG +GR
Sbjct: 121 ALGKLGKLLGTKGLMPNPKTETVTDDVPAAVRAYKKG-----KKEYRADSFGNIHMSLGR 175
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
+D + L +N +L I + KP +
Sbjct: 176 VDSASNHLVENALALLDLIKSRKPAT 201
>gi|348583902|ref|XP_003477711.1| PREDICTED: 39S ribosomal protein L1, mitochondrial-like [Cavia
porcellus]
Length = 337
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 131/281 (46%), Gaps = 26/281 (9%)
Query: 34 AARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIYASRKVDESNLTYPEDDIYLQKDYKL 93
AA K + +G K +T S++KK+ K PEDD+YL++ Y
Sbjct: 46 AATKPAKKANKGAKEKT----------SEEKKNEIEKIKSYRYMEGEPEDDVYLKRLYPR 95
Query: 94 RIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFD 153
RI++ ++A+ +++ Y P+ G V+++ K K ++P+ ++ + F
Sbjct: 96 RIYEVEKAVHLLKK-FQVLDYTYPKQ--GVFVDLTLDMALGKKKRVEPFASVISFPYPFS 152
Query: 154 HGEDRSIIAFCSQHETAAQL-QDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
++ +A + + + ++ + G A G +D I+ I + F + P+I+ D
Sbjct: 153 LEVNK--VAVLTGNPSEIEIAEGQGAAFAGGTDLIQKILDDEIHA---DFYLAVPEIMPD 207
Query: 213 LMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
L ++ LKKR P L ++G D+ + + G + +K D + ++F + I LDM
Sbjct: 208 LNPLKKKLKKRFPKLSRNSIGRDIPKMLALFKNG--HEIKVDEERENFLSTK--IATLDM 263
Query: 273 SQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
S +Q+ NL+ ++ ++ +P + F+ R L S S
Sbjct: 264 SCDQIAANLQTVINEVCRHRPLNL---GPFVVRAFLRSSTS 301
>gi|124005809|ref|ZP_01690647.1| ribosomal protein L1 [Microscilla marina ATCC 23134]
gi|123988492|gb|EAY28133.1| ribosomal protein L1 [Microscilla marina ATCC 23134]
Length = 231
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 74/162 (45%), Gaps = 13/162 (8%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D ++ CS + + +D G VG + IK IE G + VI P ++A +
Sbjct: 70 GKDVRVLVLCSP-DKEQEAKDAGADHVGLDEYIKKIEGGWTDI---DVVITMPTVMAKVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
R+ +L R +P KS T+ +D+ K ++ G K D + G +G+
Sbjct: 126 RLGRVLGPRGLMPNPKSGTVTLDVANAVKEVKAG-----KVDFKVDKTGIIHTSVGKASF 180
Query: 273 SQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+ E+L DN + ++ + ++P S +I I L S SP
Sbjct: 181 TAEKLNDNARELINTLVKLRPAS--AKGTYIKSIYLSSTMSP 220
>gi|123967758|ref|YP_001008616.1| 50S ribosomal protein L1 [Prochlorococcus marinus str. AS9601]
gi|160166296|sp|A2BNZ8.1|RL1_PROMS RecName: Full=50S ribosomal protein L1
gi|123197868|gb|ABM69509.1| 50S ribosomal protein L1 [Prochlorococcus marinus str. AS9601]
Length = 235
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 84/203 (41%), Gaps = 23/203 (11%)
Query: 94 RIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFD 153
RI+ EAL+ I+E + A I ++ T Q + + P
Sbjct: 18 RIYAPLEALSIIKENANAKFDETIEAHIRLGIDPKYTDQQLRTTVVLP------------ 65
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG +SI IA + E ++ + G L G+ D ++ I +G + F +I P ++
Sbjct: 66 HGTGQSIKIAVITSGENVSKAKAAGADLFGEEDLVESINKGNME---FDLLIATPDMMPK 122
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ ++ +L R +P K+ T+ D+ K + G K + D G G+
Sbjct: 123 VAKLGRVLGPRGLMPNPKAGTVTNDIANAIKEFKAG-KLEFRADKA----GIVHVRFGKA 177
Query: 271 DMSQEQLEDNLKRILADISTMKP 293
++E L DNLK + I KP
Sbjct: 178 SFTKEALFDNLKTLQESIDKNKP 200
>gi|301299879|ref|ZP_07206113.1| ribosomal protein L1 [Lactobacillus salivarius ACS-116-V-Col5a]
gi|385840757|ref|YP_005864081.1| 50S ribosomal protein L1, partial [Lactobacillus salivarius CECT
5713]
gi|300214878|gb|ADJ79294.1| 50S ribosomal protein L1 [Lactobacillus salivarius CECT 5713]
gi|300852550|gb|EFK80200.1| ribosomal protein L1 [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 167
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D++++ F ++ A + +D G +VGD D + I+ G + F I P ++A +
Sbjct: 8 GKDQTVVVF-AKGAKAQEAKDAGADVVGDDDLVARIQDGWL---DFDVAIATPDMMAQVG 63
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L K +P K+ T+ +D+ ++G + Y +D G +G++
Sbjct: 64 RLGRVLGPKGLMPNPKTGTVTMDVTKAVTDAKSGQVTYRTDRD------GNVHVPLGKVS 117
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
++E LE N K + I+ +P S
Sbjct: 118 FTEEALEGNFKAVYDVIAKARPAS 141
>gi|386286930|ref|ZP_10064111.1| 50S ribosomal protein L1 [gamma proteobacterium BDW918]
gi|385280082|gb|EIF44013.1| 50S ribosomal protein L1 [gamma proteobacterium BDW918]
Length = 232
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 100/240 (41%), Gaps = 36/240 (15%)
Query: 96 FQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHG 155
+ F+EA+A ++E ++ P A V I+ +K V + HG
Sbjct: 21 YSFEEAVALLKEV---SVIKFPEAI---DVAINLGVDARK------SDQAVRGATTLPHG 68
Query: 156 EDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
+++ +A +Q E A + + G VG D ++ G M F V+ +P D M
Sbjct: 69 TGKTVRVAVFTQGENAEKAKAAGADFVGMDDLAAQVKGG---MMDFDVVVASP----DAM 121
Query: 215 RIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHI 267
R+ G L + +P K+ T+ D+ K + G ++Y K+ G I
Sbjct: 122 RVVGQLGQVLGPRGLMPNPKTGTVTADVETAVKNAKAGQVRYRTDKN------GIIHGAI 175
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLIEK 327
G + L+DNL+ +L D+ KP S ++ ++ L S P +D++ L K
Sbjct: 176 GSISFDANILKDNLEALLGDLRKAKPSS--AKGVYMKKVTLSSTMGP-GIAIDMASLSAK 232
>gi|218290027|ref|ZP_03494194.1| ribosomal protein L1 [Alicyclobacillus acidocaldarius LAA1]
gi|218239861|gb|EED07049.1| ribosomal protein L1 [Alicyclobacillus acidocaldarius LAA1]
Length = 233
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 73/147 (49%), Gaps = 15/147 (10%)
Query: 154 HGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG ++ ++ F ++ E A + Q+ G VGD D I+ I +G + F + P ++
Sbjct: 67 HGTGKTPRVLVF-AKGEKAREAQEAGADFVGDDDLIQKISQGWLD---FDVAVATPDMMP 122
Query: 212 DLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIG 268
+ R+ +L R +P K+ T+ D+ +++G ++Y + K G IG
Sbjct: 123 AVGRLGRILGPRGLMPNPKTGTVTFDVARAVNEIKSGKVEYRLDK------AGIIHCPIG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPPS 295
+ +EQL +N + +++ + +KPP+
Sbjct: 177 KASFEKEQLVENFRALMSALVKVKPPA 203
>gi|78778591|ref|YP_396703.1| 50S ribosomal protein L1 [Prochlorococcus marinus str. MIT 9312]
gi|91207367|sp|Q31CX8.1|RL1_PROM9 RecName: Full=50S ribosomal protein L1
gi|78712090|gb|ABB49267.1| LSU ribosomal protein L1P [Prochlorococcus marinus str. MIT 9312]
Length = 235
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 23/203 (11%)
Query: 94 RIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFD 153
RI+ EAL+ I+E + A I ++ T Q + P
Sbjct: 18 RIYPPLEALSIIKENANAKFDETIEAHIRLGIDPKYTDQQLRTTVALP------------ 65
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG +SI IA + E ++ + G L G+ D ++ I +G + F +I P ++
Sbjct: 66 HGTGQSIKIAVITSGENVSKAKSAGADLFGEEDLVESINKGNMD---FDLLIATPDMMPK 122
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ ++ +L R +P K+ T+ D+ K + G K + D G G+
Sbjct: 123 VAKLGRVLGPRGLMPNPKAGTVTNDIANAIKEFKAG-KLEFRADKA----GIVHVRFGKA 177
Query: 271 DMSQEQLEDNLKRILADISTMKP 293
++E L DNLK + I KP
Sbjct: 178 SFTKEALFDNLKTLQESIDKNKP 200
>gi|159487501|ref|XP_001701761.1| plastid ribosomal protein L1 [Chlamydomonas reinhardtii]
gi|158280980|gb|EDP06736.1| plastid ribosomal protein L1 [Chlamydomonas reinhardtii]
Length = 297
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 64/140 (45%), Gaps = 16/140 (11%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A +Q++ +D G +VG D I+ I G + F +I P ++ + ++ +L
Sbjct: 135 VAVLTQNDNIKLAKDAGADVVGGDDLIEKISGGFME---FDKLIATPDMMPKVAKLGRVL 191
Query: 221 KKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHI--GRLDMSQE 275
R +P K+ T+ D+ G K + G ++Y + K + H+ GR D +E
Sbjct: 192 GPRGLMPNPKAGTVTTDVAGTVKDFKGGKVEYRLDK--------TGNLHVLFGRADFKEE 243
Query: 276 QLEDNLKRILADISTMKPPS 295
L NLK + I KPP
Sbjct: 244 DLLFNLKAVQESIDANKPPG 263
>gi|452853988|ref|YP_007495672.1| 50S ribosomal protein L1 [Desulfovibrio piezophilus]
gi|451897642|emb|CCH50521.1| 50S ribosomal protein L1 [Desulfovibrio piezophilus]
Length = 236
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D ++ FC + E A+ ++ G G + ++ I+ G + F + P ++A +
Sbjct: 70 GKDVRVVVFC-KPEKEAEAKEAGADFAGSDELVEKIQGGWLD---FDKAVATPDMMAVVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
+I +L R +P K+ T+ +D+ L+ G K K D G IG++
Sbjct: 126 KIGRVLGPRGLMPNAKTGTVTMDVATAVTELKAG-KVEFKVDKA----GILHAPIGKVSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
E+L +NL+ +L+ + +MKP S
Sbjct: 181 GAEKLCENLRTLLSKVVSMKPSS 203
>gi|384136743|ref|YP_005519457.1| 50S ribosomal protein L1 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
gi|339290828|gb|AEJ44938.1| ribosomal protein L1 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 233
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 15/147 (10%)
Query: 154 HGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG ++ ++ F ++ E A + Q+ G VGD D I+ I +G + F + P ++
Sbjct: 67 HGTGKTPRVLVF-AKGEKAREAQEAGADFVGDEDLIQKISQGWLD---FDVAVATPDMMP 122
Query: 212 DLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIG 268
+ R+ +L R +P K+ T+ D+ +++G ++Y + K G IG
Sbjct: 123 AVGRLGRILGPRGLMPNPKTGTVTFDVARAVNEIKSGKVEYRLDK------AGIIHCPIG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPPS 295
+ +EQL +N + +++ + KPP+
Sbjct: 177 KASFEKEQLVENFRALMSALVKAKPPA 203
>gi|258512682|ref|YP_003186116.1| 50S ribosomal protein L1 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479408|gb|ACV59727.1| ribosomal protein L1 [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 233
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 72/147 (48%), Gaps = 15/147 (10%)
Query: 154 HGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG ++ ++ F ++ E A + Q+ G VGD D I+ I +G + F + P ++
Sbjct: 67 HGTGKTPRVLVF-AKGEKAREAQEAGADFVGDEDLIQKISQGWLD---FDVAVATPDMMP 122
Query: 212 DLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIG 268
+ R+ +L R +P K+ T+ D+ +++G ++Y + K G IG
Sbjct: 123 AVGRLGRILGPRGLMPNPKTGTVTFDVARAVNEIKSGKVEYRLDK------AGIIHCPIG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPPS 295
+ +EQL +N + +++ + KPP+
Sbjct: 177 KASFEKEQLVENFRALMSALVKAKPPA 203
>gi|126695561|ref|YP_001090447.1| 50S ribosomal protein L1 [Prochlorococcus marinus str. MIT 9301]
gi|160166293|sp|A3PAS1.1|RL1_PROM0 RecName: Full=50S ribosomal protein L1
gi|126542604|gb|ABO16846.1| 50S ribosomal protein L1 [Prochlorococcus marinus str. MIT 9301]
Length = 235
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 23/203 (11%)
Query: 94 RIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFD 153
RI+ EAL+ I+E + A I ++ T Q + P
Sbjct: 18 RIYAPLEALSIIKENANAKFDETIEAHIRLGIDPKYTDQQLRTTVALP------------ 65
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG +SI IA + E ++ + G L G+ D ++ I +G + F +I P ++
Sbjct: 66 HGTGQSIKIAVITSGENVSKAKAAGADLFGEEDLVESINKGNME---FDLLIATPDMMPK 122
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ ++ +L R +P K+ T+ D+ K + G K + D G G+
Sbjct: 123 VAKLGRVLGPRGLMPNPKAGTVTNDIANAIKEFKAG-KLEFRADKA----GIVHVRFGKA 177
Query: 271 DMSQEQLEDNLKRILADISTMKP 293
++E L DNLK + I KP
Sbjct: 178 SFTKEALFDNLKTLQESIDKNKP 200
>gi|300121623|emb|CBK22141.2| Ribosomal protein L1 [Blastocystis hominis]
Length = 302
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 85/190 (44%), Gaps = 21/190 (11%)
Query: 139 MDPW--THIVEVEHSFDHGEDR-SIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLV 195
+DP IV HG + IA + + A + G +VG D I I++G +
Sbjct: 65 VDPTKTNQIVRGTVMLPHGNGKHPRIAVFADGKYAEDAKQAGADIVGLDDLISDIKQGKI 124
Query: 196 TMPTFQFVICNPKILADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSM-- 251
F I P+ + L + +L KK +P+ K+ T D+ T I+ ++
Sbjct: 125 D---FDVAITAPRYMPKLAPVARILGPKKLMPSSKNGTASSDI-------PTAIRDALRG 174
Query: 252 KKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSE 311
K++ + +G+L + EQL DNL+ + +S +KPP+ ++FI + L S
Sbjct: 175 KREIKPDKSAAIRMGLGKLSFTDEQLLDNLREFVIQLSAIKPPTA---KNFIQAVCLSST 231
Query: 312 PSPEKFKLDL 321
P F LDL
Sbjct: 232 MGPA-FFLDL 240
>gi|167753044|ref|ZP_02425171.1| hypothetical protein ALIPUT_01310 [Alistipes putredinis DSM 17216]
gi|167659358|gb|EDS03488.1| ribosomal protein L1 [Alistipes putredinis DSM 17216]
Length = 232
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 151 SFDHGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
+ HG + + + C+ E A+ Q G VG + ++ I+ G + +IC P
Sbjct: 64 TLPHGTGKQVRVLVLCTP-EKEAEAQAAGADYVGLDEYVEKIKSGWTDI---DVIICTPN 119
Query: 209 ILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
++ + + +L R +P K+ T+ +++ +++G K D + FG
Sbjct: 120 VMGKVGALGRILGPRGLMPNPKTGTVTMEVGKAVSEVKSG-----KIDFKVDKFGIIHTS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+G++ S EQ+ DN+ +L+ I +KP + ++ I L + SP
Sbjct: 175 VGKISFSAEQIADNVNTVLSMIMKLKPAA--AKGSYVKSIFLSTTMSP 220
>gi|221485754|gb|EEE24024.1| hypothetical protein TGGT1_045350 [Toxoplasma gondii GT1]
Length = 743
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 17/164 (10%)
Query: 158 RSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIR 217
R I AF + + AA L + G +VG ++ I G ++ F+ +I P ++A L R
Sbjct: 573 RVIAAFVDKKDEAAAL-EAGADVVGAERILEEIRTGKIS---FEVLISTPDMVARLTRYG 628
Query: 218 GLL--KKRIPTLKSQTLGVDLIGIAKRL--QTGIKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+L K +P TL D G A RL QT I Y + F IG + MS
Sbjct: 629 KILGPKDLMPQAAWGTLTADFAG-AIRLYRQTTIPYKADR------FNIVHLPIGLVSMS 681
Query: 274 QEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKF 317
+E+L +NL +A I+ +P + F+ ++ + S P F
Sbjct: 682 REELRENLDAAIAAINASRPATA--GSKFLNKVHISSTMGPGIF 723
>gi|406660204|ref|ZP_11068338.1| 50S ribosomal protein L1 [Cecembia lonarensis LW9]
gi|405556082|gb|EKB51051.1| 50S ribosomal protein L1 [Cecembia lonarensis LW9]
Length = 232
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVI 204
+V + H G+D ++ C+ + + ++ G VG D I IE G + +I
Sbjct: 62 VVALPHG--TGKDVKVLVLCTP-DKEEEAKEAGADYVGLDDYIAKIEGGWTDI---DVII 115
Query: 205 CNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
P ++A + R+ +L R +P KS T+ +++ K ++ G K D + FG
Sbjct: 116 TMPNVMAKVGRLGRVLGPRGLMPNPKSGTVTLEVGKAVKEVKAG-----KIDFKVDKFGI 170
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + EQ+++N K ++ IS +KP S
Sbjct: 171 IHAGIGKASFTPEQIQENAKELINTISKLKPAS 203
>gi|154148543|ref|YP_001407183.1| 50S ribosomal protein L1 [Campylobacter hominis ATCC BAA-381]
gi|166219569|sp|A7I3U2.1|RL1_CAMHC RecName: Full=50S ribosomal protein L1
gi|153804552|gb|ABS51559.1| ribosomal protein L1 [Campylobacter hominis ATCC BAA-381]
Length = 233
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 95/205 (46%), Gaps = 23/205 (11%)
Query: 94 RIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFD 153
+I+ EA+ ++ L A TVEIS + KY D +V
Sbjct: 19 KIYNINEAVETVKT--------LASAKFDETVEISLKLNVDP-KYAD---QMVRGSVVLP 66
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
G + + +A ++ A + ++ G +VG + I+ I++G + F +I P ++
Sbjct: 67 AGTGKKVRVAVIAKDAKADEAKNAGADIVGSEELIEEIQKGNIN---FDVLIATPNLMGL 123
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ ++ +L K +P K+ T+ +D+ K ++G + + + D Q G + IG++
Sbjct: 124 VGKVGRILGPKGIMPNPKTDTVTMDITNAVKNAKSG-QVNFRVDKQ----GNINAGIGKV 178
Query: 271 DMSQEQLEDNLKRILADISTMKPPS 295
S+EQ+ +NL + +I+ KP +
Sbjct: 179 SFSKEQICNNLTTFIKEINKHKPAT 203
>gi|237835299|ref|XP_002366947.1| 50S ribosomal protein L1, putative [Toxoplasma gondii ME49]
gi|211964611|gb|EEA99806.1| 50S ribosomal protein L1, putative [Toxoplasma gondii ME49]
Length = 745
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 17/164 (10%)
Query: 158 RSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIR 217
R I AF + + AA L + G +VG ++ I G ++ F+ +I P ++A L R
Sbjct: 575 RVIAAFVDKKDEAAAL-EAGADVVGAERILEEIRTGKIS---FEVLISTPDMVARLTRYG 630
Query: 218 GLL--KKRIPTLKSQTLGVDLIGIAKRL--QTGIKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+L K +P TL D G A RL QT I Y + F IG + MS
Sbjct: 631 KILGPKDLMPQAAWGTLTADFAG-AIRLYRQTTIPYKADR------FNIVHLPIGLVSMS 683
Query: 274 QEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKF 317
+E+L +NL +A I+ +P + F+ ++ + S P F
Sbjct: 684 REELRENLDAAIAAINASRPATA--GSKFLNKVHISSTMGPGIF 725
>gi|187251892|ref|YP_001876374.1| 50S ribosomal protein L1 [Elusimicrobium minutum Pei191]
gi|186972052|gb|ACC99037.1| Ribosomal protein L1 [Elusimicrobium minutum Pei191]
Length = 226
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 12/156 (7%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
IA ++ E A + Q+ G LVG D I+ + +G++ F ++ P + DL + +L
Sbjct: 72 IAVVAKGEKAKEAQEAGADLVGGDDIIEDVMKGVIN---FDVLLATPDTMKDLSKAAKVL 128
Query: 221 KKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLE 278
R +P KS T+ DL L+ G + K D +G +G+ ++L
Sbjct: 129 GPRGLMPNPKSGTVTFDLAKAISELKAG-RIEFKADA----YGIVHTIVGKASFDADKLA 183
Query: 279 DNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
N K I+ I +KP + ++ I L S P
Sbjct: 184 QNAKAIIDTILRIKPTT--AKGQYVKSISLSSTMGP 217
>gi|308234976|ref|ZP_07665713.1| 50S ribosomal protein L1 [Gardnerella vaginalis ATCC 14018 = JCM
11026]
gi|311114244|ref|YP_003985465.1| 50S ribosomal protein L1 [Gardnerella vaginalis ATCC 14019]
gi|385802105|ref|YP_005838508.1| 50S ribosomal protein L1 [Gardnerella vaginalis HMP9231]
gi|415702501|ref|ZP_11458672.1| 50S ribosomal protein L1 [Gardnerella vaginalis 284V]
gi|415705720|ref|ZP_11460991.1| 50S ribosomal protein L1 [Gardnerella vaginalis 75712]
gi|310945738|gb|ADP38442.1| 50S ribosomal protein L1 [Gardnerella vaginalis ATCC 14019]
gi|333393756|gb|AEF31674.1| ribosomal protein L1 [Gardnerella vaginalis HMP9231]
gi|388052442|gb|EIK75466.1| 50S ribosomal protein L1 [Gardnerella vaginalis 75712]
gi|388053462|gb|EIK76449.1| 50S ribosomal protein L1 [Gardnerella vaginalis 284V]
Length = 231
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 106/255 (41%), Gaps = 40/255 (15%)
Query: 62 KKKKDIYASRKVDESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFI 121
+ KK A+ K+D +NL P + I L K F + A A +R P + +
Sbjct: 4 RSKKYREAAEKIDRNNLYTPAEAIALLKSMPKHAFD-ESAEAVMRLNVDPRKAD---QLV 59
Query: 122 GATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALV 181
V + T G+ ++ F ++ A + Q+ G +V
Sbjct: 60 RGVVNLPNGT-----------------------GKTAKVLVF-ARGPKATEAQEAGADIV 95
Query: 182 GDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGI 239
GD + I+ + G + F V+ P ++ + R+ +L R +P K+ T+ +D+
Sbjct: 96 GDDELIEKVAGGFLD---FDAVVATPDMMGKVGRLGRVLGPRSLMPNPKTGTVTMDVAKA 152
Query: 240 AKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPED 299
++ G K + D Q G F G+L ++ LE+N K + +I +KP +
Sbjct: 153 VADIKGG-KIEFRVDRQ----GNLSFLFGKLSFDEKALEENFKAVADEIRRLKPTTI--K 205
Query: 300 EDFITRILLWSEPSP 314
+IT++ + S +P
Sbjct: 206 GRYITKVTITSTMAP 220
>gi|221503868|gb|EEE29552.1| 50S ribosomal protein L1p, putative [Toxoplasma gondii VEG]
Length = 737
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 17/164 (10%)
Query: 158 RSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIR 217
R I AF + + AA L + G +VG ++ I G ++ F+ +I P ++A L R
Sbjct: 567 RVIAAFVDKKDEAAAL-EAGADVVGAERILEEIRTGKIS---FEVLISTPDMVARLTRYG 622
Query: 218 GLL--KKRIPTLKSQTLGVDLIGIAKRL--QTGIKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+L K +P TL D G A RL QT I Y + F IG + MS
Sbjct: 623 KILGPKDLMPQAAWGTLTADFAG-AIRLYRQTTIPYKADR------FNIVHLPIGLVSMS 675
Query: 274 QEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKF 317
+E+L +NL +A I+ +P + F+ ++ + S P F
Sbjct: 676 REELRENLDAAIAAINASRPATA--GSKFLNKVHISSTMGPGIF 717
>gi|410030884|ref|ZP_11280714.1| 50S ribosomal protein L1 [Marinilabilia sp. AK2]
Length = 232
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 74/153 (48%), Gaps = 13/153 (8%)
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVI 204
+V + H G+D ++ C+ + + ++ G VG D I IE G + +I
Sbjct: 62 VVALPHG--TGKDVKVLVLCTP-DKEEEAKEAGADYVGLDDYIAKIEGGWTDI---DVII 115
Query: 205 CNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
P ++A + R+ +L R +P KS T+ +++ + ++ G K D + FG
Sbjct: 116 TMPNVMAKVGRLGRVLGPRGLMPNPKSGTVTLEVGKAVREVKAG-----KIDFKVDKFGI 170
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ + E+L++N K ++ IS +KP S
Sbjct: 171 IHASIGKVSFTPEKLQENAKELINTISKLKPAS 203
>gi|406882208|gb|EKD30060.1| hypothetical protein ACD_78C00169G0005 [uncultured bacterium (gcode
4)]
Length = 227
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/164 (21%), Positives = 71/164 (43%), Gaps = 11/164 (6%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG +++ I + +L ++G + G D + + G + F I P ++
Sbjct: 67 HGSGKAVRIGAFTDMGNEKELMELGATVAGGDDLLDMVASGKIE---FDIAIATPAMMRK 123
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ ++ +L K +P K+ T+G +L I K + G K+ K D Q G +G+L
Sbjct: 124 MGKVAKVLGPKGLMPNPKTGTVGDNLASIIKEIMAG-KFEFKNDKQ----GNVHSLVGKL 178
Query: 271 DMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
++L +N++ L I +KP ++ + + + P
Sbjct: 179 SFGNKKLAENIEYFLQKIRDVKPTGLKSGAAYVNSVYVCNAMGP 222
>gi|26381331|dbj|BAB29862.2| unnamed protein product [Mus musculus]
Length = 194
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 66/137 (48%), Gaps = 7/137 (5%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y RI++ ++A+ +++ N P+ G ++++ K K ++
Sbjct: 65 PEDDVYLKRLYPRRIYEVEKAIHLLKKFQVLDFTN-PKQ--GVYLDLTLDMALGKKKTVE 121
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ ++ + H F E + F + ++ G A G +D +K I V +
Sbjct: 122 PFASVIALPHLFS-SEVNKVAVFTANASEIKIAEENGAAFAGGTDLVKKIMDDEVVV--- 177
Query: 201 QFVICNPKILADLMRIR 217
F + P+I+ +L +R
Sbjct: 178 DFYVAVPEIMGELNPLR 194
>gi|110639545|ref|YP_679754.1| 50S ribosomal protein L1 [Cytophaga hutchinsonii ATCC 33406]
gi|123354296|sp|Q11QA2.1|RL1_CYTH3 RecName: Full=50S ribosomal protein L1
gi|110282226|gb|ABG60412.1| LSU ribosomal protein L1P [Cytophaga hutchinsonii ATCC 33406]
Length = 232
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 80/172 (46%), Gaps = 15/172 (8%)
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVI 204
IV + H G+D ++ C+ + A +D G VG D I+ IE G + + +I
Sbjct: 62 IVTLPHG--TGKDVRVLVLCTP-DKAQDAKDAGADHVGLDDYIQKIEGGWLDI---DVII 115
Query: 205 CNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
P ++A + ++ +L R +P K+ T+ +D+ K ++ G K D + FG
Sbjct: 116 TMPTVMAKVGKLGKILGPRNLMPNPKAGTVTLDVAKAVKDVKAG-----KIDFKVDKFGI 170
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+G++ S E + +N +L ++ +KP S ++ I L S SP
Sbjct: 171 VHTSVGKVSFSPEMILENANEVLQVLAKLKPAS--AKGTYVRSITLSSTMSP 220
>gi|213693143|ref|YP_002323729.1| 50S ribosomal protein L1 [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|384200371|ref|YP_005586114.1| 50S ribosomal protein L1 [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
gi|254799830|sp|B7GNJ5.1|RL1_BIFLI RecName: Full=50S ribosomal protein L1
gi|213524604|gb|ACJ53351.1| ribosomal protein L1 [Bifidobacterium longum subsp. infantis ATCC
15697 = JCM 1222]
gi|320459323|dbj|BAJ69944.1| 50S ribosomal protein L1 [Bifidobacterium longum subsp. infantis
ATCC 15697 = JCM 1222]
Length = 230
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/157 (22%), Positives = 76/157 (48%), Gaps = 15/157 (9%)
Query: 144 HIVEVEHSFDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
+V + HG ++ ++ F ++ A + + G +VGD D I ++ G + F
Sbjct: 57 QLVRGTVNLPHGTGKTAKVLVF-ARGPKATEATEAGADIVGDDDLIAKVQGGFLD---FD 112
Query: 202 FVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQ 258
V+ P ++ + R+ +L R +P K+ T+ +D+ K ++ G I++ + K+
Sbjct: 113 AVVATPDMMGKVGRLGRVLGPRGLMPNPKTGTVTMDVTKAVKDIKGGKIEFRVDKN---- 168
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
G F IG++ + L++N K + ++ +KP +
Sbjct: 169 --GNLSFLIGKMSFDESALDENFKAVADEVKRLKPAT 203
>gi|406882428|gb|EKD30226.1| 50S ribosomal protein L1 [uncultured bacterium (gcode 4)]
Length = 228
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 78/181 (43%), Gaps = 14/181 (7%)
Query: 137 KYMDPWTHIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLV 195
KY D ++ S +G +++ I + +L +G + G D + + G +
Sbjct: 53 KYAD---QMIRSTVSLPNGSGKTVRIGAFTDAGNEKELLALGATVAGGDDLVDIVATGKI 109
Query: 196 TMPTFQFVICNPKILADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKK 253
F I P ++ + +I +L K +P K+ T+G +L+ I K + G K+ K
Sbjct: 110 D---FDVAIATPAMMRKMGKIAKVLGPKGLMPNPKTGTVGDNLLAIVKEVMGG-KFEFKN 165
Query: 254 DPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
D Q G +G+L ++L++N++ L I +KP +I I + +
Sbjct: 166 DKQ----GNVHSLVGKLSFGPKKLQENIEFFLKTIRDVKPTGLKSGAGYINSIYVCNAMG 221
Query: 314 P 314
P
Sbjct: 222 P 222
>gi|415711941|ref|ZP_11464477.1| 50S ribosomal protein L1 [Gardnerella vaginalis 55152]
gi|415716328|ref|ZP_11466355.1| 50S ribosomal protein L1 [Gardnerella vaginalis 1400E]
gi|388057590|gb|EIK80419.1| 50S ribosomal protein L1 [Gardnerella vaginalis 1400E]
gi|388057674|gb|EIK80499.1| 50S ribosomal protein L1 [Gardnerella vaginalis 55152]
Length = 231
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 13/162 (8%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ ++ F ++ A + Q+ G +VGD + I+ + G + F V+ P ++ +
Sbjct: 70 GKTAKVLVF-ARGPKATEAQEAGADIVGDDELIEKVAGGFLD---FDAVVATPDMMGKVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
R+ +L R +P K+ T+ +D+ ++ G K + D Q G F G+L
Sbjct: 126 RLGRVLGPRSLMPNPKTGTVTMDVAKAVADIKGG-KIEFRVDRQ----GNLSFLFGKLSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
++ LE+N K + +I +KP + +IT++ + S +P
Sbjct: 181 DEKALEENFKAVADEIRRLKPTTI--KGRYITKVTITSTMAP 220
>gi|417941949|ref|ZP_12585228.1| 50S ribosomal protein L1 [Bifidobacterium breve CECT 7263]
gi|376167713|gb|EHS86541.1| 50S ribosomal protein L1 [Bifidobacterium breve CECT 7263]
Length = 230
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 74/155 (47%), Gaps = 15/155 (9%)
Query: 144 HIVEVEHSFDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
+V + HG ++ ++ F + A + + G +VGD D I ++ G + F
Sbjct: 57 QLVRGTVNLPHGTGKTAKVLVFA-RGPKATEATEAGADIVGDDDLIAKVQGGFLD---FD 112
Query: 202 FVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQ 258
V+ P ++ + R+ +L R +P K+ T+ +D+ K ++ G I++ + K+
Sbjct: 113 AVVATPDMMGKVGRLGRVLGPRGLMPNPKTGTVTMDVTKAVKDIKGGKIEFRVDKN---- 168
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
G F IG++ + L++N K + ++ +KP
Sbjct: 169 --GNLSFLIGKMSFDESALDENFKAVADEVKRLKP 201
>gi|417556283|ref|ZP_12207342.1| ribosomal protein L1 [Gardnerella vaginalis 315-A]
gi|333602778|gb|EGL14203.1| ribosomal protein L1 [Gardnerella vaginalis 315-A]
Length = 234
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 78/162 (48%), Gaps = 13/162 (8%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ ++ F ++ A + Q+ G +VGD + I+ + G + F V+ P ++ +
Sbjct: 73 GKTAKVLVF-ARGPKATEAQEAGADIVGDDELIEKVAGGFLD---FDAVVATPDMMGKVG 128
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
R+ +L R +P K+ T+ +D+ ++ G K + D Q G F G+L
Sbjct: 129 RLGRVLGPRSLMPNPKTGTVTMDVAKAVADIKGG-KIEFRVDRQ----GNLSFLFGKLSF 183
Query: 273 SQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
++ LE+N K + +I +KP + +IT++ + S +P
Sbjct: 184 DEKALEENFKAVADEIRRLKPTTI--KGRYITKVTITSTMAP 223
>gi|296454929|ref|YP_003662073.1| 50S ribosomal protein L1 [Bifidobacterium longum subsp. longum
JDM301]
gi|296184361|gb|ADH01243.1| ribosomal protein L1 [Bifidobacterium longum subsp. longum JDM301]
Length = 230
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 75/155 (48%), Gaps = 15/155 (9%)
Query: 144 HIVEVEHSFDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
+V + HG ++ ++ F ++ A + + G +VGD D I ++ G + F
Sbjct: 57 QLVRGTVNLPHGTGKTAKVLVF-ARGPKATEATEAGADIVGDDDLIAKVQGGFLD---FD 112
Query: 202 FVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQ 258
V+ P ++ + R+ +L R +P K+ T+ +D+ K ++ G I++ + K+
Sbjct: 113 AVVATPDMMGKVGRLGRVLGPRGLMPNPKTGTVTMDVTKAVKDIKGGKIEFRVDKN---- 168
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
G F IG++ + L++N K + ++ +KP
Sbjct: 169 --GNLSFLIGKMSFDESALDENFKAVADEVKRLKP 201
>gi|171741352|ref|ZP_02917159.1| hypothetical protein BIFDEN_00432 [Bifidobacterium dentium ATCC
27678]
gi|283455291|ref|YP_003359855.1| 50S ribosomal protein L1P [Bifidobacterium dentium Bd1]
gi|306823642|ref|ZP_07457017.1| 50S ribosomal protein L1 [Bifidobacterium dentium ATCC 27679]
gi|309803008|ref|ZP_07697109.1| ribosomal protein L1 [Bifidobacterium dentium JCVIHMP022]
gi|171276966|gb|EDT44627.1| ribosomal protein L1 [Bifidobacterium dentium ATCC 27678]
gi|283101925|gb|ADB09031.1| rlpA LSU ribosomal protein L1P [Bifidobacterium dentium Bd1]
gi|304553349|gb|EFM41261.1| 50S ribosomal protein L1 [Bifidobacterium dentium ATCC 27679]
gi|308220475|gb|EFO76786.1| ribosomal protein L1 [Bifidobacterium dentium JCVIHMP022]
Length = 230
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 69/141 (48%), Gaps = 11/141 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ ++ F ++ A + + G +VGD D ++ + G + F V+ P ++ +
Sbjct: 70 GKTAKVLVF-ARGPKATEALEAGADIVGDDDLVEKVAGGFLD---FDSVVATPDMMGKVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
R+ +L R +P K+ T+ +D+ K ++ G K D + G F IG+L
Sbjct: 126 RLGRVLGPRGLMPNPKTGTVTMDVTKAIKDIKGG-----KVDFRVDKNGNLSFLIGKLSF 180
Query: 273 SQEQLEDNLKRILADISTMKP 293
+++ LE+N K I ++ +KP
Sbjct: 181 TEQALEENFKAIADEVKRLKP 201
>gi|23336712|ref|ZP_00121910.1| COG0081: Ribosomal protein L1 [Bifidobacterium longum DJO10A]
gi|23465853|ref|NP_696456.1| 50S ribosomal protein L1 [Bifidobacterium longum NCC2705]
gi|189440486|ref|YP_001955567.1| 50S ribosomal protein L1 [Bifidobacterium longum DJO10A]
gi|227547018|ref|ZP_03977067.1| ribosomal protein L1 [Bifidobacterium longum subsp. longum ATCC
55813]
gi|239620883|ref|ZP_04663914.1| 50S ribosomal protein L1 [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|291457103|ref|ZP_06596493.1| ribosomal protein L1 [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|312133807|ref|YP_004001146.1| 50S ribosomal protein L1 [Bifidobacterium longum subsp. longum
BBMN68]
gi|317482950|ref|ZP_07941954.1| ribosomal protein L1 [Bifidobacterium sp. 12_1_47BFAA]
gi|322689995|ref|YP_004209729.1| 50S ribosomal protein L1 [Bifidobacterium longum subsp. infantis
157F]
gi|322691929|ref|YP_004221499.1| 50S ribosomal protein L1 [Bifidobacterium longum subsp. longum JCM
1217]
gi|384197824|ref|YP_005583568.1| 50S ribosomal protein L1 [Bifidobacterium breve ACS-071-V-Sch8b]
gi|384200699|ref|YP_005586446.1| 50S ribosomal protein L1 [Bifidobacterium longum subsp. longum KACC
91563]
gi|419846507|ref|ZP_14369749.1| ribosomal protein L1 [Bifidobacterium longum subsp. longum 1-6B]
gi|419849934|ref|ZP_14372954.1| ribosomal protein L1 [Bifidobacterium longum subsp. longum 35B]
gi|419851623|ref|ZP_14374549.1| ribosomal protein L1 [Bifidobacterium longum subsp. longum 2-2B]
gi|419855828|ref|ZP_14378576.1| ribosomal protein L1 [Bifidobacterium longum subsp. longum 44B]
gi|33301451|sp|Q8G4T3.1|RL1_BIFLO RecName: Full=50S ribosomal protein L1
gi|226724873|sp|B3DPT0.1|RL1_BIFLD RecName: Full=50S ribosomal protein L1
gi|23326552|gb|AAN25092.1| 50S ribosomal protein L1 [Bifidobacterium longum NCC2705]
gi|189428921|gb|ACD99069.1| Ribosomal protein L1 [Bifidobacterium longum DJO10A]
gi|227212550|gb|EEI80439.1| ribosomal protein L1 [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|239516144|gb|EEQ56011.1| 50S ribosomal protein L1 [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|291380938|gb|EFE88456.1| ribosomal protein L1 [Bifidobacterium breve DSM 20213 = JCM 1192]
gi|291516532|emb|CBK70148.1| LSU ribosomal protein L1P [Bifidobacterium longum subsp. longum F8]
gi|311773093|gb|ADQ02581.1| RplA [Bifidobacterium longum subsp. longum BBMN68]
gi|316915557|gb|EFV36975.1| ribosomal protein L1 [Bifidobacterium sp. 12_1_47BFAA]
gi|320456785|dbj|BAJ67407.1| 50S ribosomal protein L1 [Bifidobacterium longum subsp. longum JCM
1217]
gi|320461331|dbj|BAJ71951.1| 50S ribosomal protein L1 [Bifidobacterium longum subsp. infantis
157F]
gi|333109513|gb|AEF26529.1| ribosomal protein L1 [Bifidobacterium breve ACS-071-V-Sch8b]
gi|338753706|gb|AEI96695.1| 50S ribosomal protein L1 [Bifidobacterium longum subsp. longum KACC
91563]
gi|339479925|gb|ABE96392.1| LSU ribosomal protein L1P [Bifidobacterium breve UCC2003]
gi|386410461|gb|EIJ25246.1| ribosomal protein L1 [Bifidobacterium longum subsp. longum 35B]
gi|386413340|gb|EIJ27953.1| ribosomal protein L1 [Bifidobacterium longum subsp. longum 2-2B]
gi|386413835|gb|EIJ28411.1| ribosomal protein L1 [Bifidobacterium longum subsp. longum 1-6B]
gi|386414781|gb|EIJ29327.1| ribosomal protein L1 [Bifidobacterium longum subsp. longum 44B]
Length = 230
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/155 (22%), Positives = 74/155 (47%), Gaps = 15/155 (9%)
Query: 144 HIVEVEHSFDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
+V + HG ++ ++ F + A + + G +VGD D I ++ G + F
Sbjct: 57 QLVRGTVNLPHGTGKTAKVLVFA-RGPKATEATEAGADIVGDDDLIAKVQGGFLD---FD 112
Query: 202 FVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQ 258
V+ P ++ + R+ +L R +P K+ T+ +D+ K ++ G I++ + K+
Sbjct: 113 AVVATPDMMGKVGRLGRVLGPRGLMPNPKTGTVTMDVTKAVKDIKGGKIEFRVDKN---- 168
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
G F IG++ + L++N K + ++ +KP
Sbjct: 169 --GNLSFLIGKMSFDESALDENFKAVADEVKRLKP 201
>gi|254284408|ref|ZP_04959376.1| ribosomal protein L1 [gamma proteobacterium NOR51-B]
gi|219680611|gb|EED36960.1| ribosomal protein L1 [gamma proteobacterium NOR51-B]
Length = 231
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 76/172 (44%), Gaps = 23/172 (13%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
+ HG + +A +Q E A + G LVG D + I+ G M F V+ +P
Sbjct: 64 TLPHGTGSVVRVAVFTQGENAEKATAAGADLVGMEDLAEQIKGG---MMDFDVVVASP-- 118
Query: 210 LADLMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGY 262
D MR+ G L + +P K+ T+ D+ G K + G +++ K+ G
Sbjct: 119 --DAMRVVGQLGQILGPRGLMPNPKTGTVTPDVEGAVKNAKAGQMRFRTDKN------GI 170
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
IG++D E ++ NL +LAD+ KP + ++ R+ L + P
Sbjct: 171 VHGGIGKVDFEPEAIKGNLVAVLADLKKAKPAA--SKGVYLQRVTLSTTMGP 220
>gi|170718507|ref|YP_001783392.1| 50S ribosomal protein L1 [Haemophilus somnus 2336]
gi|189041820|sp|B0UUZ5.1|RL1_HAES2 RecName: Full=50S ribosomal protein L1
gi|168826636|gb|ACA32007.1| ribosomal protein L1 [Haemophilus somnus 2336]
Length = 229
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG RS+ +A +Q + G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGRSVRVAVFTQGANVDSAKAAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S EQL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSAEQLKENLQALLAALTKAKPAT 203
>gi|113460316|ref|YP_718377.1| 50S ribosomal protein L1 [Haemophilus somnus 129PT]
gi|123327064|sp|Q0I0V1.1|RL1_HAES1 RecName: Full=50S ribosomal protein L1
gi|112822359|gb|ABI24448.1| LSU ribosomal protein L1P [Haemophilus somnus 129PT]
Length = 229
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG RS+ +A +Q + G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGRSVRVAVFTQGANVDAAKAAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S EQL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSAEQLKENLQALLAALTKAKPAT 203
>gi|416892336|ref|ZP_11923693.1| 50S ribosomal protein L11 [Aggregatibacter aphrophilus ATCC 33389]
gi|347814838|gb|EGY31484.1| 50S ribosomal protein L11 [Aggregatibacter aphrophilus ATCC 33389]
Length = 229
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A ++ G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGREVRVAVFTQGANAEAAKEAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S+ QL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSEVQLKENLQALLAALTKAKPAT 203
>gi|406669665|ref|ZP_11076931.1| 50S ribosomal protein L1 [Facklamia ignava CCUG 37419]
gi|405582786|gb|EKB56776.1| 50S ribosomal protein L1 [Facklamia ignava CCUG 37419]
Length = 230
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 154 HGEDRS-IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG ++ + +Q E A + ++ G VGD+D I IE G + F ++ P ++
Sbjct: 67 HGTGKTQTVVVIAQGEKAKEAEEAGADFVGDADLIAKIEGGWLD---FDVMVATPDMMGQ 123
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
+ R+ +L K +P K+ T+ D+ ++ G + Y K G + IG+
Sbjct: 124 VGRLGRVLGPKGLMPNPKTGTVTQDVTKAVNDIKAGQVTYRADK------AGIVNVPIGK 177
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
+ +L++NLK + +I ++P S
Sbjct: 178 VSFEDAKLKENLKALHNEIVRLRPAS 203
>gi|218960793|ref|YP_001740568.1| 50S ribosomal subunit protein L1 [Candidatus Cloacamonas
acidaminovorans]
gi|167729450|emb|CAO80361.1| 50S ribosomal subunit protein L1 [Candidatus Cloacamonas
acidaminovorans str. Evry]
Length = 234
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 80/165 (48%), Gaps = 19/165 (11%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G++ ++ F ++ + A + + G VG D I+ I G F VI P ++ +
Sbjct: 69 GKEMRVLVF-AEGDKAEEAKKAGADYVGVDDLIEKISNGWFD---FDVVIATPNLMGRIG 124
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHI--GR 269
++ +L R +P K T+ +D+ + ++G I Y + K +++ HI G+
Sbjct: 125 KLGRVLGPRGLMPNPKVGTVTMDVGKAVQEAKSGKITYRVDK--------FANLHIPVGK 176
Query: 270 LDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
L +E+L+DN+K +LA + +PP+ +I I L + SP
Sbjct: 177 LSFEEEKLKDNIKAVLAAVLRDRPPT--LKGVYIKSITLCTTMSP 219
>gi|404449655|ref|ZP_11014644.1| 50S ribosomal protein L1 [Indibacter alkaliphilus LW1]
gi|403764919|gb|EJZ25808.1| 50S ribosomal protein L1 [Indibacter alkaliphilus LW1]
Length = 232
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 151 SFDHGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
+ HG R + + C+ + + ++ G VG D I IE G + +I P
Sbjct: 64 ALPHGTGREVKVLVLCTP-DKEEEAREAGADYVGLDDYIAKIEGGWTDV---DVIITMPN 119
Query: 209 ILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
++A + R+ +L R +P KS T+ +++ K ++ G K D + FG
Sbjct: 120 VMAKVGRLGRVLGPRGLMPNPKSGTVTLEVGKAVKEVKAG-----KIDFKVDKFGIIHAS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
+GR+ ++++DN K ++ IS +KP S
Sbjct: 175 VGRVSFGPDKIQDNAKELINTISKLKPAS 203
>gi|415707809|ref|ZP_11462359.1| 50S ribosomal protein L1 [Gardnerella vaginalis 0288E]
gi|415721774|ref|ZP_11468707.1| 50S ribosomal protein L1 [Gardnerella vaginalis 00703Bmash]
gi|415725218|ref|ZP_11470221.1| 50S ribosomal protein L1 [Gardnerella vaginalis 00703C2mash]
gi|388053070|gb|EIK76063.1| 50S ribosomal protein L1 [Gardnerella vaginalis 0288E]
gi|388060479|gb|EIK83171.1| 50S ribosomal protein L1 [Gardnerella vaginalis 00703Bmash]
gi|388062023|gb|EIK84659.1| 50S ribosomal protein L1 [Gardnerella vaginalis 00703C2mash]
Length = 231
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 105/255 (41%), Gaps = 40/255 (15%)
Query: 62 KKKKDIYASRKVDESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFI 121
+ KK A+ K+D +NL P + I L K F + A A +R P + +
Sbjct: 4 RSKKYREAAEKIDRNNLYTPAEAIALLKSMPKHAFD-ESAEAVMRLNVDPRKAD---QLV 59
Query: 122 GATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALV 181
V + T G+ ++ F ++ A + Q+ G +V
Sbjct: 60 RGVVNLPNGT-----------------------GKTAKVLVF-ARGPKATEAQEAGADIV 95
Query: 182 GDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGI 239
GD + I+ + G + F V+ P ++ + R+ +L R +P K+ T+ +D+
Sbjct: 96 GDDELIEKVAGGFLD---FDAVVATPDMMGKVGRLGRVLGPRSLMPNPKTGTVTMDVAKA 152
Query: 240 AKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPED 299
++ G K + D Q G F G+L + LE+N K + +I +KP +
Sbjct: 153 VADIKGG-KIEFRVDRQ----GNLSFLFGKLSFDDKALEENFKAVADEIRRLKPTTI--K 205
Query: 300 EDFITRILLWSEPSP 314
+IT++ + S +P
Sbjct: 206 GRYITKVTITSTMAP 220
>gi|37521169|ref|NP_924546.1| 50S ribosomal protein L1 [Gloeobacter violaceus PCC 7421]
gi|61214652|sp|Q7NK78.1|RL1_GLOVI RecName: Full=50S ribosomal protein L1
gi|35212165|dbj|BAC89541.1| 50S ribosomal protein L1 [Gloeobacter violaceus PCC 7421]
Length = 238
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
G ++I IA ++ E + + G + G + I+ I+ G + F +I P I+
Sbjct: 67 RGTGKAIRIAVLAKGEKVREAEKAGADIAGSEELIERIQGGFME---FDLMIATPDIMPQ 123
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ R+ LL R +P+ K T+ +DL+G + + G K + D G G++
Sbjct: 124 VARLGKLLGPRGLMPSPKGGTVTMDLVGAIREFKAG-KLEFRAD----RTGIVHIPFGKV 178
Query: 271 DMSQEQLEDNLKRILADISTMKP 293
+ E L DNLK + I KP
Sbjct: 179 SFTPEALMDNLKSVQDAIDRAKP 201
>gi|417841143|ref|ZP_12487248.1| 50S ribosomal protein L1 [Haemophilus haemolyticus M19501]
gi|341949737|gb|EGT76338.1| 50S ribosomal protein L1 [Haemophilus haemolyticus M19501]
Length = 229
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A ++ G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGREVRVAVFTQGANADAAKEAGADLVGMEDLAEQIQKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S+ QL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSEVQLKENLQALLAALNKAKPTT 203
>gi|377809230|ref|YP_005004451.1| 50S ribosomal protein L1 [Pediococcus claussenii ATCC BAA-344]
gi|361055971|gb|AEV94775.1| ribosomal protein L1 [Pediococcus claussenii ATCC BAA-344]
Length = 229
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 70/144 (48%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ +++I F ++ E A + QD G +VGD D ++ I+ G + F I P ++ +
Sbjct: 70 GKTQTVIVF-AKGEKAKEAQDAGADVVGDDDLVQRIQDGWL---DFDVAIATPDMMGQVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L K +P K+ T+ +D+ + + G + Y +D G IG++
Sbjct: 126 RLGRVLGPKNLMPNPKTGTVTMDVAKAVEESKGGKVTYRTDRD------GNVHVPIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
++L NL I I+ ++P S
Sbjct: 180 FDADKLLGNLNTINDTITRLRPAS 203
>gi|319790548|ref|YP_004152181.1| 50S ribosomal protein L1 [Thermovibrio ammonificans HB-1]
gi|317115050|gb|ADU97540.1| ribosomal protein L1 [Thermovibrio ammonificans HB-1]
Length = 240
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 94 RIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFD 153
+++ +EA+A +++ T N + TVE++ + KY D +V
Sbjct: 19 KLYPLKEAIALVKKMADVTQRNFDQ-----TVEMAVRLNVDP-KYQD---QMVRGSVVLP 69
Query: 154 HGEDRS-IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG + ++A +Q E + ++ G VG D I+ I++G + F +I P ++
Sbjct: 70 HGLGKERVVAVIAQGEKLNEAKEAGADYVGGDDLIQKIQQGWLD---FDVLIATPDMMGK 126
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ R+ +L R +P K+ T+ D+ K + G K D + + G IG++
Sbjct: 127 VGRLGRILGPRGLMPNPKTGTVTFDVAKAVKEAKRG-----KVDFKVEKAGIVHAPIGKV 181
Query: 271 DMSQEQLEDNLKRILADISTMKP 293
+E+L +N ++ I KP
Sbjct: 182 SFDEEKLYENAVALMKAILAAKP 204
>gi|12044934|ref|NP_072744.1| 50S ribosomal protein L1 [Mycoplasma genitalium G37]
gi|402550886|ref|YP_006599606.1| 50S ribosomal protein L1 [Mycoplasma genitalium M2321]
gi|402552379|ref|YP_006601096.1| 50S ribosomal protein L1 [Mycoplasma genitalium M2288]
gi|1350682|sp|P47328.1|RL1_MYCGE RecName: Full=50S ribosomal protein L1
gi|3844669|gb|AAC71300.1| ribosomal protein L1 [Mycoplasma genitalium G37]
gi|166079064|gb|ABY79682.1| ribosomal protein L1 [synthetic Mycoplasma genitalium JCVI-1.0]
gi|401799581|gb|AFQ02898.1| 50S ribosomal protein L1 [Mycoplasma genitalium M2321]
gi|401801074|gb|AFQ04388.1| 50S ribosomal protein L1 [Mycoplasma genitalium M2288]
Length = 226
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 90/206 (43%), Gaps = 23/206 (11%)
Query: 92 KLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHS 151
K +++ QEA I++T + I ++ + TT +++++ +
Sbjct: 17 KNKLYPIQEAFELIKKTAITKFVS--SVDIAVSLNLDTTKAEQQLRG--------AIAFP 66
Query: 152 FDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
F G+ I+A + A++ G VG D I+ I+ G + F +I +PK +
Sbjct: 67 FSIGKSIRILAITDDEKKASE---AGADFVGGLDKIEAIKNGWLD---FDLIITSPKFMG 120
Query: 212 DLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGR 269
L ++ LL R +P K++T+ D++ K + G KK+ + FG +G+
Sbjct: 121 ALGKLGKLLGTRGLMPNPKTETVTDDVVSAIKAYKKG-----KKEYRTDSFGNIHLSLGK 175
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
D E L N ++ I + +P +
Sbjct: 176 TDTKTEHLVANAMALIDLIKSKRPST 201
>gi|410957384|ref|XP_003985307.1| PREDICTED: 39S ribosomal protein L1, mitochondrial [Felis catus]
Length = 325
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 71/306 (23%), Positives = 143/306 (46%), Gaps = 29/306 (9%)
Query: 32 YYAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIYASRKVDESNLTYPEDDIYLQKDY 91
+ AA K ++ K+G K +T +K D +K Y+ + + PEDD+YL++ Y
Sbjct: 43 FAAATKPAKSTKKGVKDKTSDEKT----DETEKIKSYSFMEGE------PEDDVYLKRLY 92
Query: 92 KLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHS 151
+I + ++A+ +++ N P+ G ++++ K K ++P+ ++ +
Sbjct: 93 PRQIHEVEKAIQLLKKFQILDFTN-PKQ--GVYLDLTLDMALGKKKKVEPFASVLSFPYP 149
Query: 152 FDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
F E + F ++ G A G + I+ I + F + P+I+
Sbjct: 150 F-VSEINKVAVFTGNASEIKIAEENGAAFAGGTSLIQKILDDEIQP---DFYVAVPEIMP 205
Query: 212 DLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLD 271
+L ++ LKKR P L +++G D+ + + +TG + +K D + ++F + I LD
Sbjct: 206 ELNPLKKKLKKRFPKLTRKSIGRDIPKMLELFKTG--HEIKVDEERENFLKT--KIATLD 261
Query: 272 MSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLIEKPKAK 331
M +Q+ NL+ +++++ +P S F+ R L + S E L + L+ K
Sbjct: 262 MPSDQIVANLQAVISEVCKHRPLSL---GPFVVRAFLRTSTS-EGLLLKIEPLL----PK 313
Query: 332 ELDTGE 337
E++T E
Sbjct: 314 EVETKE 319
>gi|152990014|ref|YP_001355736.1| 50S ribosomal protein L1 [Nitratiruptor sp. SB155-2]
gi|160166286|sp|A6Q1M0.1|RL1_NITSB RecName: Full=50S ribosomal protein L1
gi|151421875|dbj|BAF69379.1| 50S ribosomal protein L1 [Nitratiruptor sp. SB155-2]
Length = 235
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/215 (23%), Positives = 97/215 (45%), Gaps = 29/215 (13%)
Query: 87 LQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDP--WTH 144
L+K K +I+ EA+ ++E L A TVE++ +DP
Sbjct: 13 LEKIEKGKIYSIDEAVKKVKE--------LKSAKFDETVELALRLG------VDPRHADQ 58
Query: 145 IVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFV 203
+V HG +++ +A ++ A + ++ G +VG D ++ I+ G + F
Sbjct: 59 MVRGSVVLPHGTGKTVRVAVFAKGAKADEAKECGADIVGAEDLVEQIQNGNID---FDIA 115
Query: 204 ICNPKILADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDF 260
I P ++ + +I +L K +P K+ T+ +D+ K + G + + + K
Sbjct: 116 IATPDMMGLVGKIGRILGPKGLMPNPKTGTVTMDVCQAVKNAKAGQVNFRVDKK------ 169
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
G IG+ S+E L++NL+ +A I+ +KP +
Sbjct: 170 GNIHAGIGKASFSEEALKENLETFVAQINKLKPAA 204
>gi|189218813|ref|YP_001939454.1| 50S ribosomal protein L1 [Methylacidiphilum infernorum V4]
gi|189185671|gb|ACD82856.1| Ribosomal protein L1 [Methylacidiphilum infernorum V4]
Length = 237
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 73/151 (48%), Gaps = 17/151 (11%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S +G +++ IA ++ A Q ++ G +VG D IK ++ G F I P
Sbjct: 70 SLPYGSGKTVRIAVFAKGTVADQAKEAGADIVGYEDLIKKVQEGYTD---FDVAIATPDA 126
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
+ ++ ++ +L R +P ++ T+ D++G + + G +++ + K ++ H
Sbjct: 127 MQEVRKLGKILGPRGLMPNPRTGTVTEDVVGAIREFRKGRVEFKVDK--------AANLH 178
Query: 267 I--GRLDMSQEQLEDNLKRILADISTMKPPS 295
+ G+ E LE+N+K ++ ++ KP S
Sbjct: 179 VVAGKASFQTEALEENIKAVVDAVAKAKPQS 209
>gi|338211320|ref|YP_004655373.1| 50S ribosomal protein L1 [Runella slithyformis DSM 19594]
gi|336305139|gb|AEI48241.1| ribosomal protein L1 [Runella slithyformis DSM 19594]
Length = 232
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 78/172 (45%), Gaps = 23/172 (13%)
Query: 151 SFDHGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQF 202
+ HG R + + CS + A+ ++ G VG + +K IE+G ++TMPT
Sbjct: 64 ALPHGTGREVRVLVLCSP-DKEAEAKEAGADYVGLDEYVKKIEQGWTDVDVIITMPTVMA 122
Query: 203 VICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
I L ++ RGL+ P KS T+ +++ K ++ G K D + FG
Sbjct: 123 KIGK---LGKILGPRGLM----PNPKSGTVTLEVGKAVKEVKAG-----KIDFKVDKFGI 170
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
IGR+ +++ N + ++A + +KP S ++ + L S SP
Sbjct: 171 IHTSIGRVSFGSDKIAQNAQELIATLMKLKPSS--AKGTYVKTVHLSSTMSP 220
>gi|315635150|ref|ZP_07890428.1| 50S ribosomal protein L1 [Aggregatibacter segnis ATCC 33393]
gi|315476112|gb|EFU66866.1| 50S ribosomal protein L1 [Aggregatibacter segnis ATCC 33393]
Length = 229
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A ++ G LVG D + +++G + F VI +P D
Sbjct: 67 HGTGREVRVAVFTQGANAEAAKEAGADLVGMEDLAEQVKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S+ QL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSEVQLKENLQALLAALTKAKPAT 203
>gi|88809793|ref|ZP_01125299.1| 50S ribosomal protein L1 [Synechococcus sp. WH 7805]
gi|88786177|gb|EAR17338.1| 50S ribosomal protein L1 [Synechococcus sp. WH 7805]
Length = 235
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 11/146 (7%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
+ HG +++ IA ++ E A+ + G L GD D ++ I +G + F +I P +
Sbjct: 63 ALPHGTGQTVRIAVITRGEKVAEAKAAGAELAGDEDLVETISKGEMN---FDLLIATPDM 119
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHI 267
+ + ++ +L R +P K+ T+ DL + G K + D G
Sbjct: 120 MPKVAKLGRVLGPRGLMPNPKAGTVTTDLASAINEFKAG-KLEFRADRT----GIVHVRF 174
Query: 268 GRLDMSQEQLEDNLKRILADISTMKP 293
G+ S+ L DNLK + I KP
Sbjct: 175 GKASFSEVNLLDNLKTLQETIDRNKP 200
>gi|313677110|ref|YP_004055106.1| 50S ribosomal protein L1p [Marivirga tractuosa DSM 4126]
gi|312943808|gb|ADR22998.1| LSU ribosomal protein L1P [Marivirga tractuosa DSM 4126]
Length = 232
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 21/157 (13%)
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMP 198
+V + H G+D ++A + + + +D G VG D IK IE G +VTMP
Sbjct: 62 VVALPHG--TGKDVKVLALVTPDKEQ-EAKDAGADYVGLDDYIKKIEGGWTDIDIIVTMP 118
Query: 199 TFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQ 258
T V+ L ++ RGL+ P KS T+ +D+ + +++G K D +
Sbjct: 119 T---VMAKVGRLGKVLGPRGLM----PNPKSGTVTLDVGKAVQEVKSG-----KIDFKVD 166
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
FG IG+ S+E++ +N ++ ++ +KP S
Sbjct: 167 KFGIIHASIGKASFSKEKITENANELIQTLAKLKPAS 203
>gi|330837664|ref|YP_004412305.1| 50S ribosomal protein L1 [Sphaerochaeta coccoides DSM 17374]
gi|329749567|gb|AEC02923.1| LSU ribosomal protein L1P [Sphaerochaeta coccoides DSM 17374]
Length = 231
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 93/222 (41%), Gaps = 26/222 (11%)
Query: 95 IFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFDH 154
++ F+EA ++E L A TVE S + KK + + + + H F
Sbjct: 19 LYSFEEAAKLVKE--------LAFAKFDETVEFSVSLALKKSQSV---RDTLVLPHQF-- 65
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
+ I+ F ++ E A + D G A VGD + I+ I G + F + P ++ D+
Sbjct: 66 AAQKRILVF-AKGEKAQEALDAGAAYVGDEELIEKIRGGWL---DFDVAVATPDMMKDVG 121
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
R+ +L +R +P K+ T+ D+ G L G + + D G IG++ M
Sbjct: 122 RLGPVLGRRGLMPNPKTHTVTFDIKGALAELNQG-RVEFRADKT----GVIHLAIGKVSM 176
Query: 273 SQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+ N +L +I +P DF+ +L S P
Sbjct: 177 DSALVAVNAVSVLEEIIRKRPSDAK--GDFVRTAVLSSTMGP 216
>gi|406027296|ref|YP_006726128.1| 50S ribosomal protein L1 [Lactobacillus buchneri CD034]
gi|405125785|gb|AFS00546.1| 50S ribosomal protein L1 [Lactobacillus buchneri CD034]
Length = 235
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G++++++ F ++ + A QD G VGD+D ++ I+ G + F I P ++A +
Sbjct: 71 GKEQTVVVF-AKGDNAKAAQDAGADFVGDADLVQKIQDGWL---DFDVAIATPDMMAQVG 126
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L K +P K+ T+ +D+ K + G + Y +D G +G+
Sbjct: 127 RLGRVLGPKGLMPNPKTGTVTMDVAKAVKESKAGKVTYRTDRD------GNVAVPVGKAS 180
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
++L NLK I I +P S
Sbjct: 181 FDTDKLVGNLKTIEDVIVKARPAS 204
>gi|323339380|ref|ZP_08079665.1| 50S ribosomal protein L1 [Lactobacillus ruminis ATCC 25644]
gi|335998626|ref|ZP_08564535.1| 50S ribosomal protein L1 [Lactobacillus ruminis SPM0211]
gi|417972458|ref|ZP_12613359.1| 50S ribosomal protein L1 [Lactobacillus ruminis ATCC 25644]
gi|323093203|gb|EFZ35790.1| 50S ribosomal protein L1 [Lactobacillus ruminis ATCC 25644]
gi|335348025|gb|EGM49534.1| 50S ribosomal protein L1 [Lactobacillus ruminis SPM0211]
gi|346331178|gb|EGX99396.1| 50S ribosomal protein L1 [Lactobacillus ruminis ATCC 25644]
Length = 230
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G++++++ F + A + +D G +VGD D ++ I+ G + F I P ++A +
Sbjct: 71 GKEQTVVVFA-KGPKAQEAKDAGADVVGDDDLVQRIQDGWL---DFDVAIATPDMMAQVG 126
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L K +P K+ T+ +D+ ++G + Y +D G +G++
Sbjct: 127 RLGRVLGPKGLMPNPKTGTVTMDVNKAVSDAKSGQVTYRTDRD------GNVHVPVGKVS 180
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
++E L+ N I IS ++P +
Sbjct: 181 FTEEALKGNFDAIYEKISRLRPAA 204
>gi|283783649|ref|YP_003374403.1| 50S ribosomal protein L1 [Gardnerella vaginalis 409-05]
gi|297243318|ref|ZP_06927252.1| ribosomal protein L1 [Gardnerella vaginalis AMD]
gi|415708500|ref|ZP_11462514.1| 50S ribosomal protein L1 [Gardnerella vaginalis 6420LIT]
gi|415709029|ref|ZP_11462851.1| 50S ribosomal protein L1 [Gardnerella vaginalis 6420B]
gi|415727786|ref|ZP_11471474.1| 50S ribosomal protein L1 [Gardnerella vaginalis 6119V5]
gi|283441529|gb|ADB13995.1| ribosomal protein L1 [Gardnerella vaginalis 409-05]
gi|296888725|gb|EFH27463.1| ribosomal protein L1 [Gardnerella vaginalis AMD]
gi|388054399|gb|EIK77337.1| 50S ribosomal protein L1 [Gardnerella vaginalis 6420LIT]
gi|388056643|gb|EIK79503.1| 50S ribosomal protein L1 [Gardnerella vaginalis 6420B]
gi|388065613|gb|EIK88092.1| 50S ribosomal protein L1 [Gardnerella vaginalis 6119V5]
Length = 231
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ ++ F ++ A + Q+ G +VGD + I+ + G + F V+ P ++ +
Sbjct: 70 GKTAKVLVF-ARGPKATEAQEAGADIVGDDELIEKVAGGFLD---FDAVVATPDMMGKVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
R+ +L R +P K+ T+ +D+ ++ G K + D Q G F G+L
Sbjct: 126 RLGRVLGPRSLMPNPKTGTVTMDVAKAVADIKGG-KIEFRVDRQ----GNLSFLFGKLSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+ LE+N K + +I +KP + +IT++ + S +P
Sbjct: 181 DAKALEENFKAVADEIRRLKPSTI--KGRYITKVTVTSTMAP 220
>gi|289209339|ref|YP_003461405.1| 50S ribosomal protein L1 [Thioalkalivibrio sp. K90mix]
gi|288944970|gb|ADC72669.1| ribosomal protein L1 [Thioalkalivibrio sp. K90mix]
Length = 231
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 37/212 (17%)
Query: 94 RIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWT--HIVEVEHS 151
R++ EA +RE LP+A +V+++ +DP +V
Sbjct: 19 RLYPVTEAFDLLRE--------LPKAKFRESVDVAVNLG------VDPRKSDQVVRGSTV 64
Query: 152 FDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKIL 210
HG +S+ +A +Q A ++ G +VG D + ++ G + F VI +P
Sbjct: 65 LPHGNGKSVRVAVFTQGANADAAKEAGADVVGMDDLAEQVKAGQMD---FDVVIASP--- 118
Query: 211 ADLMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYS 263
D MR+ G L + +P K T+ D+ ++G ++Y K G
Sbjct: 119 -DAMRVVGQLGQILGPRGLMPNPKVGTVTPDVATAVTNAKSGQVRYRTDKG------GIV 171
Query: 264 DFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG D L +NL +LAD+ MKP +
Sbjct: 172 HCTIGAADFDSSSLAENLNALLADLVKMKPAT 203
>gi|225351132|ref|ZP_03742155.1| hypothetical protein BIFPSEUDO_02719 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
gi|225158588|gb|EEG71830.1| hypothetical protein BIFPSEUDO_02719 [Bifidobacterium
pseudocatenulatum DSM 20438 = JCM 1200]
Length = 230
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 69/141 (48%), Gaps = 11/141 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ ++ F ++ A + + G +VGD D ++ + G + F V+ P ++ +
Sbjct: 70 GKTAKVLVF-ARGPKATEALEAGADIVGDDDLVQKVADGFLD---FDSVVATPDMMGKVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
R+ +L R +P K+ T+ +D+ K ++ G K D + G F IG+L
Sbjct: 126 RLGRVLGPRGLMPNPKTGTVTMDVTKAIKDIKGG-----KVDFRVDKNGNLSFLIGKLSF 180
Query: 273 SQEQLEDNLKRILADISTMKP 293
+++ L++N K + +I +KP
Sbjct: 181 TEQALDENFKAVADEIKRLKP 201
>gi|148240709|ref|YP_001226096.1| 50S ribosomal protein L1 [Synechococcus sp. WH 7803]
gi|160174526|sp|A5GPD4.1|RL1_SYNPW RecName: Full=50S ribosomal protein L1
gi|147849248|emb|CAK24799.1| 50S ribosomal protein L1 [Synechococcus sp. WH 7803]
Length = 235
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 11/146 (7%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
+ HG +++ IA ++ E A+ + G L GD D ++ I +G + F +I P +
Sbjct: 63 ALPHGTGQTVRIAVITRGEKVAEAKAAGAELAGDEDLVETISKGEMD---FDLLIATPDM 119
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHI 267
+ + ++ +L R +P K+ T+ DL + G K + D G
Sbjct: 120 MPKVAKLGRVLGPRGLMPNPKAGTVTTDLAAAINEFKAG-KLEFRADRT----GIVHVRF 174
Query: 268 GRLDMSQEQLEDNLKRILADISTMKP 293
G+ S+ L DNLK + I KP
Sbjct: 175 GKASFSEGNLLDNLKTLQETIDRNKP 200
>gi|340757693|ref|ZP_08694287.1| 50S ribosomal protein L1 [Fusobacterium varium ATCC 27725]
gi|251835987|gb|EES64524.1| 50S ribosomal protein L1 [Fusobacterium varium ATCC 27725]
Length = 235
Score = 45.8 bits (107), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 154 HGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG +++ +A S L+ G G + I I++G + F VI P ++
Sbjct: 68 HGTGKTVKVLAITSGANVEKALE-AGADYAGSDEYIAQIQQGWLD---FDLVIATPDMMP 123
Query: 212 DLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGR 269
L R+ +L K +P KS T+ D+ G + G K + + D G IG+
Sbjct: 124 KLGRLGKILGTKGLMPNPKSGTVTPDIAGAVSEFKKG-KLAFRVD----KLGSIHVPIGK 178
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
D + E++E+N K L I+ +KP S
Sbjct: 179 ADFAPEKIEENFKAFLEQITRLKPAS 204
>gi|355704270|gb|AES02173.1| mitochondrial ribosomal protein L1 [Mustela putorius furo]
Length = 323
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 111/233 (47%), Gaps = 14/233 (6%)
Query: 81 PEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMD 140
PEDD+YL++ Y +I++ ++A+ +++ N P+ G ++++ +K K ++
Sbjct: 85 PEDDVYLKRLYPRQIYEVEKAIQLLKKFQILDFTN-PKQ--GVYLDLTLDMALEKKKKVE 141
Query: 141 PWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTF 200
P+ ++ + F E + F ++ G A G + I+ I +
Sbjct: 142 PFASVLRFPYPFI-SEINKVAVFTGNASEIKIAEEHGAAFAGGVNLIQKILDDEIQS--- 197
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
F + P+I+ +L ++ LKKR P L ++G D+ + + + G + +K D + ++F
Sbjct: 198 DFYVAVPEIMPELNPLKKKLKKRFPKLTRNSIGRDIPKMLELFKMG--HEIKVDEERENF 255
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+ I LDM +Q+ NL+ +++++ +P + F+ R L S S
Sbjct: 256 --LETKIATLDMPSDQIAANLQAVISEVCKHRPVNLG---PFVVRAFLRSSTS 303
>gi|347524913|ref|YP_004831661.1| 50S ribosomal protein L1 [Lactobacillus ruminis ATCC 27782]
gi|345283872|gb|AEN77725.1| 50S ribosomal protein L1 [Lactobacillus ruminis ATCC 27782]
Length = 230
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G++++++ F + A + +D G +VGD D ++ I+ G + F I P ++A +
Sbjct: 71 GKEQTVVVFA-KGPKAQEAKDAGADVVGDDDLVQRIQDGWL---DFDVAIATPDMMAQVG 126
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L K +P K+ T+ +D+ ++G + Y +D G +G++
Sbjct: 127 RLGRVLGPKGLMPNPKTGTVTMDVKKAVSDAKSGQVTYRTDRD------GNVHVPVGKVS 180
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
++E L+ N I IS ++P +
Sbjct: 181 FTEEALKGNFDAIYEKISRLRPAA 204
>gi|212716696|ref|ZP_03324824.1| hypothetical protein BIFCAT_01630 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
gi|212660400|gb|EEB20975.1| hypothetical protein BIFCAT_01630 [Bifidobacterium catenulatum DSM
16992 = JCM 1194]
Length = 230
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 69/141 (48%), Gaps = 11/141 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ ++ F ++ A + + G +VGD D ++ + G + F V+ P ++ +
Sbjct: 70 GKTAKVLVF-ARGPKATEALEAGADIVGDDDLVQKVADGFLD---FDSVVATPDMMGKVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
R+ +L R +P K+ T+ +D+ K ++ G K D + G F IG+L
Sbjct: 126 RLGRVLGPRGLMPNPKTGTVTMDVAKAIKDIKGG-----KVDFRVDKNGNLSFLIGKLSF 180
Query: 273 SQEQLEDNLKRILADISTMKP 293
+++ L++N K + +I +KP
Sbjct: 181 TEQALDENFKAVADEIKRLKP 201
>gi|254449098|ref|ZP_05062550.1| ribosomal protein L1 [gamma proteobacterium HTCC5015]
gi|198261290|gb|EDY85583.1| ribosomal protein L1 [gamma proteobacterium HTCC5015]
Length = 229
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 79/177 (44%), Gaps = 24/177 (13%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D + F +Q E A + ++ G +VG D I+ G M F VI P D M
Sbjct: 70 GQDVRVAVF-AQGENADKAKEAGADIVGFDDLADEIKGG---MMDFDVVIATP----DAM 121
Query: 215 RIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHI 267
R+ G L + +P K T+ D+ K + G ++Y K G +
Sbjct: 122 RVVGQLGQVLGPRGLMPNPKVGTVTADVETAVKNAKAGQVRYRTDK------AGIIHCTV 175
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGL 324
G+ D + L +N+ +LAD++ KP + ++ R+ + S P ++D+SGL
Sbjct: 176 GKADFESKALIENVSALLADLNKAKPAA--AKGVYLKRVTVSSTMGP-GLQIDVSGL 229
>gi|16272460|ref|NP_438674.1| 50S ribosomal protein L1 [Haemophilus influenzae Rd KW20]
gi|68249113|ref|YP_248225.1| 50S ribosomal protein L1 [Haemophilus influenzae 86-028NP]
gi|145628897|ref|ZP_01784697.1| DNA-directed RNA polymerase subunit beta [Haemophilus influenzae
22.1-21]
gi|145633532|ref|ZP_01789261.1| 50S ribosomal protein L11 [Haemophilus influenzae 3655]
gi|145635403|ref|ZP_01791105.1| 50S ribosomal protein L11 [Haemophilus influenzae PittAA]
gi|145637445|ref|ZP_01793104.1| 50S ribosomal protein L11 [Haemophilus influenzae PittHH]
gi|145638569|ref|ZP_01794178.1| 50S ribosomal protein L11 [Haemophilus influenzae PittII]
gi|148827707|ref|YP_001292460.1| 50S ribosomal protein L1 [Haemophilus influenzae PittGG]
gi|229844325|ref|ZP_04464465.1| 50S ribosomal protein L1 [Haemophilus influenzae 6P18H1]
gi|260580963|ref|ZP_05848786.1| ribosomal protein L1 [Haemophilus influenzae RdAW]
gi|260582780|ref|ZP_05850567.1| ribosomal protein L1 [Haemophilus influenzae NT127]
gi|319775563|ref|YP_004138051.1| 50S ribosomal protein L1 [Haemophilus influenzae F3047]
gi|319897970|ref|YP_004136167.1| 50S ribosomal protein L1 [Haemophilus influenzae F3031]
gi|329122394|ref|ZP_08250981.1| 50S ribosomal protein L1 [Haemophilus aegyptius ATCC 11116]
gi|378696712|ref|YP_005178670.1| 50S ribosomal protein L1 [Haemophilus influenzae 10810]
gi|1172985|sp|P44342.2|RL1_HAEIN RecName: Full=50S ribosomal protein L1
gi|81336481|sp|Q4QN32.1|RL1_HAEI8 RecName: Full=50S ribosomal protein L1
gi|160166025|sp|A5UH21.1|RL1_HAEIG RecName: Full=50S ribosomal protein L1
gi|1573499|gb|AAC22174.1| ribosomal protein L1 (rpL1) [Haemophilus influenzae Rd KW20]
gi|68057312|gb|AAX87565.1| 50S ribosomal protein L1 [Haemophilus influenzae 86-028NP]
gi|144979367|gb|EDJ89053.1| DNA-directed RNA polymerase subunit beta [Haemophilus influenzae
22.1-21]
gi|144985901|gb|EDJ92509.1| 50S ribosomal protein L11 [Haemophilus influenzae 3655]
gi|145267409|gb|EDK07411.1| 50S ribosomal protein L11 [Haemophilus influenzae PittAA]
gi|145269391|gb|EDK09335.1| 50S ribosomal protein L11 [Haemophilus influenzae PittHH]
gi|145272164|gb|EDK12072.1| 50S ribosomal protein L11 [Haemophilus influenzae PittII]
gi|148718949|gb|ABR00077.1| 50S ribosomal protein L1 [Haemophilus influenzae PittGG]
gi|229812574|gb|EEP48263.1| 50S ribosomal protein L1 [Haemophilus influenzae 6P18H1]
gi|260092322|gb|EEW76262.1| ribosomal protein L1 [Haemophilus influenzae RdAW]
gi|260094230|gb|EEW78131.1| ribosomal protein L1 [Haemophilus influenzae NT127]
gi|301169231|emb|CBW28828.1| 50S ribosomal subunit protein L1 [Haemophilus influenzae 10810]
gi|309750073|gb|ADO80057.1| 50S ribosomal subunit protein L1 [Haemophilus influenzae R2866]
gi|317433476|emb|CBY81859.1| 50S ribosomal subunit protein L1 [Haemophilus influenzae F3031]
gi|317450154|emb|CBY86368.1| 50S ribosomal subunit protein L1 [Haemophilus influenzae F3047]
gi|327473676|gb|EGF19095.1| 50S ribosomal protein L1 [Haemophilus aegyptius ATCC 11116]
Length = 229
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A ++ G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGREVRVAVFTQGANADAAKEAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S+ QL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSEVQLKENLQALLAALNKAKPTT 203
>gi|342903610|ref|ZP_08725419.1| 50S ribosomal protein L1 [Haemophilus haemolyticus M21621]
gi|341954961|gb|EGT81427.1| 50S ribosomal protein L1 [Haemophilus haemolyticus M21621]
Length = 229
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A ++ G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGREVRVAVFTQGANADAAKEAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S+ QL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSEVQLKENLQALLAALNKAKPTT 203
>gi|145630306|ref|ZP_01786087.1| 50S ribosomal protein L11 [Haemophilus influenzae R3021]
gi|145640492|ref|ZP_01796076.1| DNA-directed RNA polymerase subunit beta [Haemophilus influenzae
R3021]
gi|417839666|ref|ZP_12485839.1| 50S ribosomal protein L1 [Haemophilus haemolyticus M19107]
gi|417842444|ref|ZP_12488529.1| 50S ribosomal protein L1 [Haemophilus haemolyticus M21127]
gi|144984041|gb|EDJ91478.1| 50S ribosomal protein L11 [Haemophilus influenzae R3021]
gi|145275078|gb|EDK14940.1| DNA-directed RNA polymerase subunit beta [Haemophilus influenzae
22.4-21]
gi|341951656|gb|EGT78218.1| 50S ribosomal protein L1 [Haemophilus haemolyticus M21127]
gi|341952032|gb|EGT78575.1| 50S ribosomal protein L1 [Haemophilus haemolyticus M19107]
Length = 229
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A ++ G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGREVRVAVFTQGANADAAKEAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S+ QL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSEVQLKENLQALLAALNKAKPTT 203
>gi|325577263|ref|ZP_08147747.1| 50S ribosomal protein L1 [Haemophilus parainfluenzae ATCC 33392]
gi|345428913|ref|YP_004822029.1| 50S ribosomal protein L1 [Haemophilus parainfluenzae T3T1]
gi|419802071|ref|ZP_14327272.1| ribosomal protein L1 [Haemophilus parainfluenzae HK262]
gi|419845337|ref|ZP_14368613.1| ribosomal protein L1 [Haemophilus parainfluenzae HK2019]
gi|301154972|emb|CBW14435.1| 50S ribosomal subunit protein L1 [Haemophilus parainfluenzae T3T1]
gi|325160845|gb|EGC72966.1| 50S ribosomal protein L1 [Haemophilus parainfluenzae ATCC 33392]
gi|385191393|gb|EIF38807.1| ribosomal protein L1 [Haemophilus parainfluenzae HK262]
gi|386416112|gb|EIJ30626.1| ribosomal protein L1 [Haemophilus parainfluenzae HK2019]
Length = 229
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A ++ G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGREVRVAVFTQGANADAAKEAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S+ QL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSEVQLKENLQALLAALNKAKPTT 203
>gi|419838530|ref|ZP_14361955.1| ribosomal protein L1 [Haemophilus haemolyticus HK386]
gi|386910295|gb|EIJ74952.1| ribosomal protein L1 [Haemophilus haemolyticus HK386]
Length = 229
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A ++ G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGREVRVAVFTQGANADAAKEAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S+ QL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSEVQLKENLQALLAALNKAKPTT 203
>gi|221194796|ref|ZP_03567853.1| ribosomal protein L1 [Atopobium rimae ATCC 49626]
gi|221185700|gb|EEE18090.1| ribosomal protein L1 [Atopobium rimae ATCC 49626]
Length = 249
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S HG +S+ +A ++ E A + + G LVG + ++ +++G + F I P++
Sbjct: 78 SLPHGTGKSVRVAVFAEGEKAREAEAAGADLVGGDELVEAVQKGNLD---FDAAIATPQM 134
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
+ + ++ +L R +P K T+ +D+ + L+ G ++Y + +G
Sbjct: 135 MGKVGKLGRILGPRGLMPNPKLGTVTMDVAKMVSELKAGRVEYRADR------YGICHVP 188
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+G+ +QL +N +L +I +KP S ++ +++ S P
Sbjct: 189 MGKASFEVQQLVENYGALLTEILRVKPSS--AKGKYVKSVVISSTMGP 234
>gi|212535236|ref|XP_002147774.1| mitochondrial 54S ribosomal protein MRPL1 [Talaromyces marneffei
ATCC 18224]
gi|210070173|gb|EEA24263.1| mitochondrial large ribosomal subunit protein L1, putative
[Talaromyces marneffei ATCC 18224]
Length = 289
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 76/151 (50%), Gaps = 27/151 (17%)
Query: 175 DMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKIL-----ADLMRI---RGLLKKRIPT 226
+ G ++VGD + + I++G++ F+ IC+ L A L RI RGL+ P+
Sbjct: 149 EAGASIVGDQEIFENIKKGIIE---FERCICHTDSLDALNKAGLGRILGPRGLM----PS 201
Query: 227 LKSQTLGVDLIGI-AKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRIL 285
+K+ T+ VD +GI + L+ G Y +E+D IG+L S EQL DNL+ L
Sbjct: 202 VKTGTV-VDDVGIRVQMLRGGTVY------RERD-AVIRMPIGQLGFSPEQLRDNLRAAL 253
Query: 286 ADI---STMKPPSKPEDEDFITRILLWSEPS 313
I +T P++ I RILL S S
Sbjct: 254 EQIKKDATQLSDRVPKEVYEIVRILLQSCSS 284
>gi|183601877|ref|ZP_02963246.1| 50S ribosomal protein L1 [Bifidobacterium animalis subsp. lactis
HN019]
gi|219682791|ref|YP_002469174.1| 50S ribosomal protein L1 [Bifidobacterium animalis subsp. lactis
AD011]
gi|241190367|ref|YP_002967761.1| 50S ribosomal protein L1 [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241195773|ref|YP_002969328.1| 50S ribosomal protein L1 [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|384190598|ref|YP_005576346.1| 50S ribosomal protein L1 [Bifidobacterium animalis subsp. lactis
BB-12]
gi|384191739|ref|YP_005577486.1| 50S ribosomal protein L1 [Bifidobacterium animalis subsp. lactis
CNCM I-2494]
gi|384193367|ref|YP_005579113.1| 50S ribosomal protein L1 [Bifidobacterium animalis subsp. lactis
BLC1]
gi|384194923|ref|YP_005580668.1| 50S ribosomal protein L1 [Bifidobacterium animalis subsp. lactis
V9]
gi|386866515|ref|YP_006279509.1| 50S ribosomal protein L1 [Bifidobacterium animalis subsp. animalis
ATCC 25527]
gi|387820233|ref|YP_006300276.1| 50S ribosomal protein L1 [Bifidobacterium animalis subsp. lactis
B420]
gi|387821895|ref|YP_006301844.1| 50S ribosomal protein L1 [Bifidobacterium animalis subsp. lactis
Bi-07]
gi|423678889|ref|ZP_17653765.1| 50S ribosomal protein L1 [Bifidobacterium animalis subsp. lactis BS
01]
gi|254799829|sp|B8DVU7.1|RL1_BIFA0 RecName: Full=50S ribosomal protein L1
gi|183218762|gb|EDT89404.1| 50S ribosomal protein L1 [Bifidobacterium animalis subsp. lactis
HN019]
gi|219620441|gb|ACL28598.1| ribosomal protein L1 [Bifidobacterium animalis subsp. lactis AD011]
gi|240248759|gb|ACS45699.1| 50S ribosomal protein L1 [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240250327|gb|ACS47266.1| 50S ribosomal protein L1 [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|289178090|gb|ADC85336.1| LSU ribosomal protein L1P [Bifidobacterium animalis subsp. lactis
BB-12]
gi|295793354|gb|ADG32889.1| 50S ribosomal protein L1 [Bifidobacterium animalis subsp. lactis
V9]
gi|340364476|gb|AEK29767.1| LSU ribosomal protein L1P [Bifidobacterium animalis subsp. lactis
CNCM I-2494]
gi|345282226|gb|AEN76080.1| 50S ribosomal protein L1 [Bifidobacterium animalis subsp. lactis
BLC1]
gi|366042078|gb|EHN18559.1| 50S ribosomal protein L1 [Bifidobacterium animalis subsp. lactis BS
01]
gi|385700598|gb|AFI62546.1| 50S ribosomal protein L1 [Bifidobacterium animalis subsp. animalis
ATCC 25527]
gi|386652934|gb|AFJ16064.1| LSU ribosomal protein L1p (L10Ae) [Bifidobacterium animalis subsp.
lactis B420]
gi|386654503|gb|AFJ17632.1| LSU ribosomal protein L1p (L10Ae) [Bifidobacterium animalis subsp.
lactis Bi-07]
Length = 229
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 52/249 (20%), Positives = 103/249 (41%), Gaps = 42/249 (16%)
Query: 69 ASRKVDESNLTYPEDDIYLQKDYKLRIFQFQEAL-AAIRETHHPTMYNLPRAFIGATVEI 127
A+ ++D +NL PE+ I L K + + F + + A +R P + + +V +
Sbjct: 11 AAERIDRNNLYTPEEAIALLK--SMPAYNFDQTVEAVLRLNVDPRKAD---QLVRGSVNL 65
Query: 128 STTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTI 187
T G+ ++ F + A + + G +VGD D +
Sbjct: 66 PNGT-----------------------GKTAKVLVFA-RGPKATEALEAGADIVGDDDLV 101
Query: 188 KGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQT 245
+ + G + F V+ P ++ + R+ +L R +P K+ T+ +D+ K ++
Sbjct: 102 EKVANGFLD---FDSVVATPDMMGKVGRLGRVLGPRGLMPNPKTGTVTMDVTKAIKDIKG 158
Query: 246 GIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITR 305
G K D + G F G+L S E L+ N + + ++ +KP + +IT+
Sbjct: 159 G-----KVDFRVDKNGNLSFLFGKLSFSAEALDQNFRAVADEVKRLKPAT--VKGRYITK 211
Query: 306 ILLWSEPSP 314
+ S +P
Sbjct: 212 ATISSTMNP 220
>gi|325294358|ref|YP_004280872.1| 50S ribosomal protein L1 [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325064806|gb|ADY72813.1| ribosomal protein L1 [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 240
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 93/203 (45%), Gaps = 20/203 (9%)
Query: 94 RIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTH-IVEVEHSF 152
+++ EA+ +++ T N + TVE++ + KY D V + H
Sbjct: 19 KLYPLDEAIGLVKKMADVTKRNFDQ-----TVEMAVRLNVDP-KYQDQMVRGSVVLPHGL 72
Query: 153 DHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
G++R + A +Q E + Q+ G VG D I+ I++G + F +I P +++
Sbjct: 73 --GKERKV-AVIAQGEKLQEAQEAGADFVGGDDLIQKIQQGWLD---FDILIATPDMMSK 126
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ R+ +L R +P K+ T+ D+ K ++G K D + + G IG++
Sbjct: 127 VGRLGRILGPRGLMPNPKTGTVTFDIAKAVKEAKSG-----KVDFKVEKAGIVHAPIGKV 181
Query: 271 DMSQEQLEDNLKRILADISTMKP 293
+++L +N +L I +KP
Sbjct: 182 SFDEQKLLENAVALLKAILAVKP 204
>gi|27364613|ref|NP_760141.1| 50S ribosomal protein L1 [Vibrio vulnificus CMCP6]
gi|37681346|ref|NP_935955.1| 50S ribosomal protein L1 [Vibrio vulnificus YJ016]
gi|320155007|ref|YP_004187386.1| 50S ribosomal protein L1p [Vibrio vulnificus MO6-24/O]
gi|33301563|sp|Q8DD23.1|RL1_VIBVU RecName: Full=50S ribosomal protein L1
gi|61215666|sp|Q7MGR5.1|RL1_VIBVY RecName: Full=50S ribosomal protein L1
gi|27360732|gb|AAO09668.1| ribosomal protein L1 [Vibrio vulnificus CMCP6]
gi|37200097|dbj|BAC95926.1| ribosomal protein L1 [Vibrio vulnificus YJ016]
gi|319930319|gb|ADV85183.1| LSU ribosomal protein L1p (L10Ae) [Vibrio vulnificus MO6-24/O]
Length = 233
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 70/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G +VG D + +++G + F V+ +P D
Sbjct: 67 HGTGRDIRVAVFAQGANAEAAKEAGADIVGMEDLAEQVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++D S EQ+++NL+ +L + KP S
Sbjct: 174 TIGKVDFSAEQIKENLEALLVALKKAKPSS 203
>gi|415725820|ref|ZP_11470371.1| 50S ribosomal protein L1 [Gardnerella vaginalis 00703Dmash]
gi|388064156|gb|EIK86719.1| 50S ribosomal protein L1 [Gardnerella vaginalis 00703Dmash]
Length = 231
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ ++ F ++ A + Q+ G +VGD + I+ + G + F V+ P ++ +
Sbjct: 70 GKTAKVLVF-ARGPKATEAQEAGADIVGDDELIEKVAGGFLD---FDAVVATPDMMGKVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
R+ +L R +P K+ T+ +D+ ++ G K + D Q G F G+L
Sbjct: 126 RLGRVLGPRSLMPNPKTGTVTMDVAKAVADIKGG-KIEFRVDRQ----GNLSFLFGKLSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+ LE+N K + ++ +KP + +IT++ + S +P
Sbjct: 181 DAKALEENFKAVADEVRRLKPTTI--KGRYITKVTVTSTMAP 220
>gi|331701820|ref|YP_004398779.1| 50S ribosomal protein L1 [Lactobacillus buchneri NRRL B-30929]
gi|329129163|gb|AEB73716.1| ribosomal protein L1 [Lactobacillus buchneri NRRL B-30929]
Length = 235
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G++++++ F ++ + A QD G VGD+D ++ I+ G + F I P ++A +
Sbjct: 71 GKEQTVVVF-AKGDNAKVAQDAGADFVGDADLVQKIQDGWL---DFDVAIATPDMMAQVG 126
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L K +P K+ T+ +D+ K + G + Y +D G +G+
Sbjct: 127 RLGRVLGPKGLMPNPKTGTVTMDVAKAVKESKAGKVTYRTDRD------GNVAVPVGKAS 180
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
++L NLK I I +P S
Sbjct: 181 FDTDKLVGNLKTIEDVIVKARPAS 204
>gi|448105301|ref|XP_004200460.1| Piso0_003047 [Millerozyma farinosa CBS 7064]
gi|448108439|ref|XP_004201091.1| Piso0_003047 [Millerozyma farinosa CBS 7064]
gi|359381882|emb|CCE80719.1| Piso0_003047 [Millerozyma farinosa CBS 7064]
gi|359382647|emb|CCE79954.1| Piso0_003047 [Millerozyma farinosa CBS 7064]
Length = 278
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 22/185 (11%)
Query: 110 HPTMYNLPRAF-------IGATVEISTTTHQKKV---KYMDPWTHIVEVEHSFDHGEDRS 159
HP ++PRA +G +T + Q V + P + V + H S
Sbjct: 65 HPLYMDIPRALRYLRAAEVGYPASSTTLSLQVTVIPERGSKPLSGSVFLPHPLKQS---S 121
Query: 160 IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGL 219
++ F S E Q + G + G + IK I+ G + + F P I+++L I +
Sbjct: 122 MLVFSSNEEALEQAKRKGASRTGGTSLIKEIQAGEIRLDDFTHSFATPDIMSELGPIARI 181
Query: 220 LKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQL 277
L R +P+ K T +++ + I+ ++ P +Q + IGR D + +Q+
Sbjct: 182 LGPRNLMPSPKKGT-------VSENISALIEENLGSLPFKQKERHLAIPIGRCDFTDKQI 234
Query: 278 EDNLK 282
+N+K
Sbjct: 235 LENIK 239
>gi|415718482|ref|ZP_11467356.1| 50S ribosomal protein L1 [Gardnerella vaginalis 1500E]
gi|388059833|gb|EIK82547.1| 50S ribosomal protein L1 [Gardnerella vaginalis 1500E]
Length = 231
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ ++ F ++ A + Q+ G +VGD + I+ + G + F V+ P ++ +
Sbjct: 70 GKTAKVLVF-ARGPKATEAQEAGADIVGDDELIEKVAGGFLD---FDAVVATPDMMGKVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
R+ +L R +P K+ T+ +D+ ++ G K + D Q G F G+L
Sbjct: 126 RLGRVLGPRSLMPNPKTGTVTMDVAKAVADIKGG-KIEFRVDRQ----GNLSFLFGKLSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+ LE+N K + ++ +KP + +IT++ + S +P
Sbjct: 181 DAKALEENFKAVADEVRRLKPTTI--KGRYITKVTVTSTMAP 220
>gi|157412561|ref|YP_001483427.1| 50S ribosomal protein L1 [Prochlorococcus marinus str. MIT 9215]
gi|166984548|sp|A8G2L0.1|RL1_PROM2 RecName: Full=50S ribosomal protein L1
gi|157387136|gb|ABV49841.1| 50S ribosomal protein L1 [Prochlorococcus marinus str. MIT 9215]
Length = 235
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 23/203 (11%)
Query: 94 RIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFD 153
RI+ EAL+ I+E + A I ++ T Q + P
Sbjct: 18 RIYAPLEALSIIKENANAKFDETIEAHIRLGIDPKYTDQQLRTTVALP------------ 65
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG +SI IA + E ++ + G L G+ D ++ I +G + F +I P ++
Sbjct: 66 HGTGQSIRIAVITSGENVSKAKSAGADLFGEEDLVESINKGNME---FDLLIATPDMMPK 122
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ ++ +L R +P K+ T+ D+ K + G K + D G G+
Sbjct: 123 VAKLGRVLGPRGLMPNPKAGTVTNDIGNAIKEFKAG-KLEFRADKA----GIVHVRFGKA 177
Query: 271 DMSQEQLEDNLKRILADISTMKP 293
++E L +NLK + I KP
Sbjct: 178 SFTKEALFENLKTLQESIDKNKP 200
>gi|298252893|ref|ZP_06976687.1| ribosomal protein L1 [Gardnerella vaginalis 5-1]
gi|297533257|gb|EFH72141.1| ribosomal protein L1 [Gardnerella vaginalis 5-1]
Length = 199
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 77/162 (47%), Gaps = 13/162 (8%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ ++ F ++ A + Q+ G +VGD + I+ + G + F V+ P ++ +
Sbjct: 38 GKTAKVLVF-ARGPKATEAQEAGADIVGDDELIEKVAGGFLD---FDAVVATPDMMGKVG 93
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
R+ +L R +P K+ T+ +D+ ++ G K + D Q G F G+L
Sbjct: 94 RLGRVLGPRSLMPNPKTGTVTMDVAKAVADIKGG-KIEFRVDRQ----GNLSFLFGKLSF 148
Query: 273 SQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+ LE+N K + +I +KP + +IT++ + S +P
Sbjct: 149 DAKALEENFKAVADEIRRLKPSTI--KGRYITKVTVTSTMAP 188
>gi|194476828|ref|YP_002049007.1| 50S ribosomal protein L1 [Paulinella chromatophora]
gi|171191835|gb|ACB42797.1| 50S ribosomal protein L1 [Paulinella chromatophora]
Length = 235
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 60/135 (44%), Gaps = 10/135 (7%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
IA ++ E A+ + G + GD + ++ I +G + F +I P ++ + ++ +L
Sbjct: 74 IAVIARGEKVAEAKAAGADIAGDDELVETIAKGEMN---FDLLIATPDMMPKVAKLGRIL 130
Query: 221 KKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLE 278
R +P KS T+ DL+ K + G K + D G G+ S E L
Sbjct: 131 GPRGLMPNPKSGTVTTDLVSAIKEFKAG-KLEFRADRT----GIVHVRFGKASFSTEALL 185
Query: 279 DNLKRILADISTMKP 293
DNLK + I KP
Sbjct: 186 DNLKTLQESIDRNKP 200
>gi|38233047|ref|NP_938814.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae NCTC 13129]
gi|376247710|ref|YP_005139654.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae HC04]
gi|61214635|sp|Q6NJG9.1|RL1_CORDI RecName: Full=50S ribosomal protein L1
gi|38199306|emb|CAE48937.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae]
gi|372114278|gb|AEX80336.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae HC04]
Length = 235
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 17/176 (9%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V S +G +S+ +A ++ E A + Q G +VG ++ I+ I G + F
Sbjct: 57 QLVRGTVSLPNGTGKSVRVAVFAEGEKATEAQAAGADIVGTTELIEQITAGTIE---FDV 113
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
I P +A + R+ +L R +P K+ T+ D+ ++ G K S + D
Sbjct: 114 AIATPDQMAKVGRVARVLGPRGLMPNPKTGTVTNDVAKAIAEVKGG-KISFRVDKA---- 168
Query: 261 GYSDFH--IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
S+ H IG+ E+L +N +L +I+ +KP S ++ ++ L S P
Sbjct: 169 --SNLHAIIGKASFDAEKLAENYGALLDEINRIKPSS--AKGIYVKKVTLTSTFGP 220
>gi|400406309|ref|YP_006589057.1| ribosomal protein L1 [secondary endosymbiont of Heteropsylla
cubana]
gi|400364562|gb|AFP85629.1| ribosomal protein L1 [secondary endosymbiont of Heteropsylla
cubana]
Length = 234
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 79/182 (43%), Gaps = 24/182 (13%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R++ +A +Q A + G LVG D I++G V F VI +P D
Sbjct: 67 HGTGRNVRVAVFAQGSNAEAARTAGAHLVGMDDLADHIKKGEVN---FDVVIASP----D 119
Query: 213 LMRIRG----LLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G LL R +P K T+ ++ K ++ G I+Y K+ G
Sbjct: 120 AMRVVGQLGPLLGPRGLMPNPKVGTITSNISEAVKNVKAGQIRYRNDKN------GIVHA 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLI 325
IG+++ +L +NL+ +L + KP P+ + + + S LDL L+
Sbjct: 174 SIGKINFDSNKLRENLEALLFSLKKAKP---PQTKGIYIKKITISTTMGTGVSLDLLALL 230
Query: 326 EK 327
K
Sbjct: 231 TK 232
>gi|317968192|ref|ZP_07969582.1| 50S ribosomal protein L1 [Synechococcus sp. CB0205]
Length = 235
Score = 45.4 bits (106), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 63/146 (43%), Gaps = 11/146 (7%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
+ HG +SI IA ++ E A+ + G L GD D ++ I +G + F +I P +
Sbjct: 63 ALPHGTGQSIRIAVIARGEKVAEAKAAGADLAGDDDLVETISKGEME---FDLLIATPDM 119
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHI 267
+ + ++ +L R +P K+ T+ DL + G K + D G
Sbjct: 120 MPKVAKLGRVLGPRGLMPNPKAGTVTTDLASAISEFKAG-KLEFRADRT----GIVHVRF 174
Query: 268 GRLDMSQEQLEDNLKRILADISTMKP 293
G+ QL DNLK + I KP
Sbjct: 175 GKASFDVAQLLDNLKALQETIDRNKP 200
>gi|217967755|ref|YP_002353261.1| 50S ribosomal protein L1 [Dictyoglomus turgidum DSM 6724]
gi|226724905|sp|B8E0K2.1|RL1_DICTD RecName: Full=50S ribosomal protein L1
gi|217336854|gb|ACK42647.1| ribosomal protein L1 [Dictyoglomus turgidum DSM 6724]
Length = 242
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 14/149 (9%)
Query: 152 FDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
+ G+++ ++ F ++ E A + ++ G VG D +K IE G + F I P I+
Sbjct: 67 YGTGKEKKVLVF-AEGEKAQEAREAGADYVGGEDLVKQIESGWLD---FDVAIATPDIMG 122
Query: 212 DL---MRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
L R+ +L R +P K+ T+ D+ K + G + + D +G
Sbjct: 123 TLKIPSRLGKILGPRGLMPNPKTGTVTNDIAKAVKEYKAG-RVEFRTD----RYGIVHVP 177
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ S+E L NL +L + +KP +
Sbjct: 178 IGKASFSEEALYKNLMTVLGTLLRLKPAA 206
>gi|206900115|ref|YP_002251087.1| 50S ribosomal protein L1 [Dictyoglomus thermophilum H-6-12]
gi|226724904|sp|B5YEX9.1|RL1_DICT6 RecName: Full=50S ribosomal protein L1
gi|206739218|gb|ACI18276.1| ribosomal protein L1 [Dictyoglomus thermophilum H-6-12]
Length = 242
Score = 45.1 bits (105), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 68/149 (45%), Gaps = 14/149 (9%)
Query: 152 FDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
+ G+++ ++ F ++ E A + ++ G VG D +K IE G + F I P I+
Sbjct: 67 YGTGKEKKVLVF-AEGEKAQEAREAGADYVGGEDLVKQIESGWLD---FDVAIATPDIMG 122
Query: 212 DL---MRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
L R+ +L R +P K+ T+ D+ K + G + + D +G
Sbjct: 123 TLKIPSRLGKILGPRGLMPNPKTGTVTNDIAKAVKEYKAG-RVEFRTD----RYGIVHVP 177
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ S+E L NL +L + +KP +
Sbjct: 178 IGKASFSEEALYKNLMTVLGTLLRLKPAA 206
>gi|295111112|emb|CBL27862.1| LSU ribosomal protein L1P [Synergistetes bacterium SGP1]
Length = 234
Score = 45.1 bits (105), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G R ++ + E + QD G +VG D ++ I G + F VI P ++ +
Sbjct: 69 GVTRRVLVLAA-GEKQKEAQDAGADIVGGEDLVQKISGGWLE---FDAVIATPDMMKSVG 124
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L R +P+ K+ T+ DL ++ G +++ + K G + IGR +
Sbjct: 125 RLGKVLGPRGMMPSAKTGTVTFDLTNAISEIKAGRVEFRVDKA------GITHNAIGRRE 178
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
+ +QL +N K IL I +P S
Sbjct: 179 FTVDQLFENAKAILQAIYKARPAS 202
>gi|440750305|ref|ZP_20929549.1| LSU ribosomal protein L1p (L10Ae) [Mariniradius saccharolyticus
AK6]
gi|436481346|gb|ELP37527.1| LSU ribosomal protein L1p (L10Ae) [Mariniradius saccharolyticus
AK6]
Length = 232
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 69/143 (48%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D ++ C+ + + +D G VG D I IE G + +I P ++A +
Sbjct: 70 GKDIRVLVLCTP-DKEQEAKDAGADHVGLDDYIAKIEGGWTDI---DVIITTPNVMAKVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
R+ +L R +P KS T+ +++ K ++ G K D + G +G++
Sbjct: 126 RLGRVLGPRGLMPNPKSGTVTLEVGKAVKEVKAG-----KIDFKVDKTGIIHASVGKVSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
E+++DN+K ++ IS +KP +
Sbjct: 181 DPEKIQDNVKELVNTISRLKPST 203
>gi|408790924|ref|ZP_11202535.1| ribosomal protein L1 [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408464953|gb|EKJ88677.1| ribosomal protein L1 [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 230
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 123 ATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSI--IAFCSQHETAAQLQDMGVAL 180
T+EIST + K ++ V S HG ++I + FC + + + ++ G
Sbjct: 39 GTLEISTKINYKSLQN-------VRGTISLPHGTGKTIKVLVFC-KGDKQNEAKEAGADF 90
Query: 181 VGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIG 238
VGD D I+ + G F + P ++ ++ ++ +L ++ +P K+ T+ D+
Sbjct: 91 VGDMDLIEKVSGGWTD---FDACVATPDMMKEVGKLGPVLGRKGLMPKPKAGTVTTDVAK 147
Query: 239 IAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKP 297
K L+ G I+Y K G +G+ S ++L DN+ ++A + KP
Sbjct: 148 AVKELKAGRIEYRPDKG------GVVHLGVGKCSFSDDKLSDNINAVVAALMKDKPSDAK 201
Query: 298 ED 299
D
Sbjct: 202 GD 203
>gi|325280611|ref|YP_004253153.1| 50S ribosomal protein L1 [Odoribacter splanchnicus DSM 20712]
gi|324312420|gb|ADY32973.1| ribosomal protein L1 [Odoribacter splanchnicus DSM 20712]
Length = 231
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 85/188 (45%), Gaps = 24/188 (12%)
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMP 198
+V + H G+D ++ C+ + + + G VG + I+ ++ G ++TMP
Sbjct: 62 VVTLPHG--TGKDIRVLVLCTP-DKVEEAKAAGADYVGLDEYIEKLKSGWTDIDIIITMP 118
Query: 199 TFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQ 258
I L ++ RGL+ P KS T+ +++ K ++ G K D +
Sbjct: 119 AIMGKIGA---LGRILGPRGLM----PNPKSGTVTMEIGKAVKEVKQG-----KIDFKVD 166
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFK 318
FG IG+++ E++ DN + +A I +KP S ++ + L S SP K
Sbjct: 167 KFGIVHTSIGKVNFEAEKIMDNAREFMATIQKLKPSS--AKGTYVKSVFLSSTMSP-GIK 223
Query: 319 LDLSGLIE 326
LDL L++
Sbjct: 224 LDLKSLLD 231
>gi|427391350|ref|ZP_18885756.1| 50S ribosomal protein L1 [Actinobaculum massiliae ACS-171-V-Col2]
gi|425731993|gb|EKU94805.1| 50S ribosomal protein L1 [Actinobaculum massiliae ACS-171-V-Col2]
Length = 233
Score = 45.1 bits (105), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 13/156 (8%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V S HG ++ + +Q E A + D G VGD D I ++ G F
Sbjct: 57 QMVRGTVSLPHGTGKTARVVVFAQGERAQEAIDAGADEVGDDDLIAKVQGGYTD---FDA 113
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQD 259
+ P ++ + R+ +L R +P K+ T+ +D+ ++ G I++ + K+
Sbjct: 114 AVATPDMMGKVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVADIKGGRIEFRVDKN----- 168
Query: 260 FGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
G F +G + EQL DN +I +KP S
Sbjct: 169 -GNLAFIVGNTSFTTEQLTDNYAAAQEEILRLKPAS 203
>gi|313673491|ref|YP_004051602.1| 50S ribosomal protein L1 [Calditerrivibrio nitroreducens DSM 19672]
gi|312940247|gb|ADR19439.1| LSU ribosomal protein L1P [Calditerrivibrio nitroreducens DSM
19672]
Length = 233
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 13/149 (8%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
+ HG + + + ++ E A + Q+ G VGD D +K I+ G + F V+ P +
Sbjct: 64 TLPHGTGKQVKVLVFAKGEKAKEAQEAGADYVGDDDLVKKIQEGWLD---FDKVVATPDM 120
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
+ + ++ +L R +P K T+ ++ + K L+ G I++ + K G
Sbjct: 121 MGAVGKLGKILGPRGLMPNPKVGTVTTNIKEVVKNLKAGMIEFRVDK------AGIIHAP 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G+ E+LE+N K +L + KP S
Sbjct: 175 VGKKSFDVEKLEENFKALLETLIKAKPAS 203
>gi|121997659|ref|YP_001002446.1| 50S ribosomal protein L1 [Halorhodospira halophila SL1]
gi|160166047|sp|A1WVD2.1|RL1_HALHL RecName: Full=50S ribosomal protein L1
gi|121589064|gb|ABM61644.1| LSU ribosomal protein L1P [Halorhodospira halophila SL1]
Length = 231
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 13/156 (8%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
IV +G +S+ +A +Q E A Q G VG D + ++ G + +
Sbjct: 57 QIVRGSTVLPNGTGKSMRVAVFAQGENADAAQAEGADAVGMDDLAERMQGGELD---YDV 113
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQD 259
VI +P + + ++ +L R +P K+ T+ D+ G + + G ++Y +
Sbjct: 114 VIASPDAMGVVGKLGPVLGPRGLMPNPKTGTVSADVAGAVRNAKAGQVRYRTDRG----- 168
Query: 260 FGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
G IGR + ++ L +NL +LAD++ +KP +
Sbjct: 169 -GVIHSAIGRANFDEQALRENLDALLADLNKLKPST 203
>gi|383788755|ref|YP_005473324.1| 50S ribosomal protein L1 [Caldisericum exile AZM16c01]
gi|381364392|dbj|BAL81221.1| 50S ribosomal protein L1 [Caldisericum exile AZM16c01]
Length = 232
Score = 45.1 bits (105), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 14/150 (9%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIER-GLVTMPTFQFVICNPK 208
+ HG +S+ + + + A + +D G VG D I+ IE+ G + F I P
Sbjct: 63 TLPHGTGKSVKVLVFATADKAQEAKDAGADYVGGEDLIQKIEKEGFLD---FDVAIATPD 119
Query: 209 ILADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
++ L RI +L +K +P+ KS T+ +D+ K + G I++ + K G
Sbjct: 120 MMKSLGRIAKILGPRKLMPSPKSGTVTMDIYDTVKEFKAGKIEFRVDKT------GVIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + EQL++NL + + I +P S
Sbjct: 174 VIGKSSFTPEQLKENLLALNSAIIKSRPAS 203
>gi|375292321|ref|YP_005126860.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae INCA 402]
gi|376253539|ref|YP_005141998.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae PW8]
gi|371581992|gb|AEX45658.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae INCA 402]
gi|372116623|gb|AEX69093.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae PW8]
Length = 235
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V S +G +S+ +A ++ E A + Q G +VG ++ I+ I G + F
Sbjct: 57 QLVRGTVSLPNGTGKSVRVAVFAEGEKATEAQAAGADIVGTTELIEQITAGTIE---FDV 113
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
I P +A + R+ +L R +P K+ T+ D+ ++ G K S + D
Sbjct: 114 AIATPDQMAKVGRVARVLGPRGLMPNPKTGTVTNDVAKAIAEVKGG-KISFRVDKA---- 168
Query: 261 GYSDFH--IGRLDMSQEQLEDNLKRILADISTMKPPS 295
S+ H IG+ E+L +N +L +++ +KP S
Sbjct: 169 --SNLHAIIGKASFDAEKLAENYGALLDEVNRIKPSS 203
>gi|121718332|ref|XP_001276175.1| mitochondrial 54S ribosomal protein MRPL1 [Aspergillus clavatus
NRRL 1]
gi|119404373|gb|EAW14749.1| mitochondrial large ribosomal subunit protein L1, putative
[Aspergillus clavatus NRRL 1]
Length = 275
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 35/158 (22%)
Query: 136 VKYMDPWTHIVEVEHSFDHGEDRSIIAFC---SQHETAAQLQDMGVALVGDSDTIKGIER 192
++ M + H V+ E I C S+HE A+ G LVG+SD ++
Sbjct: 88 IRNMLRFPHSVQTESR--------ICVVCPSGSRHEKEARAA--GAVLVGESDVFDAVKA 137
Query: 193 GLVTMPTFQFVICNPKIL-----ADLMRI---RGLLKKRIPTLKSQTLGVDLIGIAKRLQ 244
G + F +IC+P L A L RI RGL+ P++K+ T+ D+ + L+
Sbjct: 138 GKIE---FDRLICHPDSLDALNKAGLGRILGPRGLM----PSVKTGTVVEDVASRVEMLR 190
Query: 245 TGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLK 282
G Y +E+D IG+L S EQL DNL+
Sbjct: 191 GGTVY------RERD-AVIRLPIGQLAFSPEQLRDNLR 221
>gi|375290100|ref|YP_005124640.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae 241]
gi|376242080|ref|YP_005132932.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae CDCE 8392]
gi|376244935|ref|YP_005135174.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae HC01]
gi|376256344|ref|YP_005144235.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae VA01]
gi|376283935|ref|YP_005157145.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae 31A]
gi|376289583|ref|YP_005161830.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae C7 (beta)]
gi|376292495|ref|YP_005164169.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae HC02]
gi|419860054|ref|ZP_14382699.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
gi|371577450|gb|AEX41118.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae 31A]
gi|371579771|gb|AEX43438.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae 241]
gi|372102979|gb|AEX66576.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae C7 (beta)]
gi|372105322|gb|AEX71384.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae CDCE 8392]
gi|372107565|gb|AEX73626.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae HC01]
gi|372109818|gb|AEX75878.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae HC02]
gi|372118861|gb|AEX82595.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae VA01]
gi|387983262|gb|EIK56739.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae bv.
intermedius str. NCTC 5011]
Length = 235
Score = 44.7 bits (104), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 17/176 (9%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V S +G +S+ +A ++ E A + Q G +VG ++ I+ I G + F
Sbjct: 57 QLVRGTVSLPNGTGKSVRVAVFAEGEKATEAQAAGADIVGTTELIEQITAGTIE---FDV 113
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
I P +A + R+ +L R +P K+ T+ D+ ++ G K S + D
Sbjct: 114 AIATPDQMAKVGRVARVLGPRGLMPNPKTGTVTNDVAKAIAEVKGG-KISFRVDKA---- 168
Query: 261 GYSDFH--IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
S+ H IG+ E+L +N +L +++ +KP S ++ ++ L S P
Sbjct: 169 --SNLHAIIGKASFDAEKLAENYGALLDEVNRIKPSS--AKGIYVKKVTLTSTFGP 220
>gi|257460971|ref|ZP_05626071.1| ribosomal protein L1 [Campylobacter gracilis RM3268]
gi|257441634|gb|EEV16777.1| ribosomal protein L1 [Campylobacter gracilis RM3268]
Length = 233
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 71/144 (49%), Gaps = 11/144 (7%)
Query: 155 GEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADL 213
G +S+ +A ++ A++ + G +VG D I+ I++G + F +I P ++ +
Sbjct: 68 GTGKSVRVAVIAKDAKASEASEAGADIVGADDLIEEIQKGNIN---FDVLIATPNLMGLV 124
Query: 214 MRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ +D+ K + G + + + D Q G +G+
Sbjct: 125 GKVGRILGPKGVMPNPKTGTVTMDVAQAVKNAKGG-QVNFRVDKQ----GNIHAGLGKAS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
S+EQL DNL + I+ KP +
Sbjct: 180 FSKEQLLDNLTTFIKTINKHKPAT 203
>gi|336322742|ref|YP_004602709.1| 50S ribosomal protein L1 [Flexistipes sinusarabici DSM 4947]
gi|336106323|gb|AEI14141.1| ribosomal protein L1 [Flexistipes sinusarabici DSM 4947]
Length = 235
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 95/215 (44%), Gaps = 29/215 (13%)
Query: 87 LQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDP--WTH 144
L K +L+ ++ QEAL+ ++E T N + A V++ +DP
Sbjct: 12 LSKIDRLKSYELQEALSLLKEV---TFANFDET-VEAVVKLG----------VDPRHADQ 57
Query: 145 IVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFV 203
+V S HG +++ + ++ + A + +D G VGD D + I+ G F V
Sbjct: 58 MVRGSVSLPHGTGKTVRVLVFAKGDKAQEAKDAGADYVGDDDLMSKIQGGWFD---FDKV 114
Query: 204 ICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDF 260
+ P ++A + ++ LL R +P K T+ ++ + L+ G I+Y + K
Sbjct: 115 VATPDMMASVGKLGRLLGPRGLMPNPKVGTVTNNIKEVVSDLKAGMIEYRVDK------A 168
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
G +G+ QL +NLK ++ + KP S
Sbjct: 169 GIIHAPVGKKSFESTQLAENLKSLIDSLVKAKPES 203
>gi|376250529|ref|YP_005137410.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae HC03]
gi|372112033|gb|AEX78092.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae HC03]
Length = 235
Score = 44.7 bits (104), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 80/176 (45%), Gaps = 17/176 (9%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V S +G +S+ +A ++ E A + Q G +VG ++ I+ I G + F
Sbjct: 57 QLVRGTVSLPNGTGKSVRVAVFAEGEKATEAQAAGADIVGTTELIEQITAGTIE---FDV 113
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
I P +A + R+ +L R +P K+ T+ D+ ++ G K S + D
Sbjct: 114 AIATPDQMAKVGRVARVLGPRGLMPNPKTGTVTNDVAKAITEVKGG-KISFRVDKA---- 168
Query: 261 GYSDFH--IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
S+ H IG+ E+L +N +L +++ +KP S ++ ++ L S P
Sbjct: 169 --SNLHAIIGKASFDAEKLAENYGALLDEVNRIKPSS--AKGIYVKKVTLTSTFGP 220
>gi|183221357|ref|YP_001839353.1| 50S ribosomal protein L1 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911450|ref|YP_001963005.1| 50S ribosomal protein L1 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|226724931|sp|B0SAG4.1|RL1_LEPBA RecName: Full=50S ribosomal protein L1
gi|226724932|sp|B0SSI7.1|RL1_LEPBP RecName: Full=50S ribosomal protein L1
gi|167776126|gb|ABZ94427.1| 50S Ribosomal protein L1 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779779|gb|ABZ98077.1| 50S ribosomal protein L1 [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
Length = 230
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 123 ATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSI--IAFCSQHETAAQLQDMGVAL 180
T+EIST + K ++ V S HG ++I + FC + + + ++ G
Sbjct: 39 GTLEISTKINYKSLQN-------VRGTISLPHGTGKTIKVLVFC-KGDKQNEAREAGADF 90
Query: 181 VGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIG 238
VGD D I+ + G F + P ++ ++ ++ +L ++ +P K+ T+ D+
Sbjct: 91 VGDMDLIEKVSGGWTD---FDACVATPDMMKEVGKLGPVLGRKGLMPKPKAGTVTTDVSK 147
Query: 239 IAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKP 297
K L+ G I+Y K G +G+ S ++L DN+ ++A + KP
Sbjct: 148 AVKELKAGRIEYRPDKG------GVVHLGVGKCSFSDDKLSDNINAVVAALMKDKPSDAK 201
Query: 298 ED 299
D
Sbjct: 202 GD 203
>gi|304310006|ref|YP_003809604.1| 50S ribosomal protein L1 [gamma proteobacterium HdN1]
gi|301795739|emb|CBL43938.1| 50S ribosomal protein L1 [gamma proteobacterium HdN1]
Length = 231
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 24/189 (12%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V +G +S+ +A +Q A + G LVG D I++G++ F
Sbjct: 57 QVVRGASVLPNGTGKSVRVAVFAQGANADLARAAGAELVGMDDLADEIQKGIIN---FDV 113
Query: 203 VICNPKILADLMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDP 255
I +P D MR+ G L + +P K T+ D+ K + G ++Y K
Sbjct: 114 AIASP----DAMRVVGRLGQILGPRGLMPNPKVGTVTTDVALAVKNAKAGQVRYRTDK-- 167
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPE 315
G +G++ + E ++ N+ +LAD+ MKP + ++ ++ L S P
Sbjct: 168 ----AGIIHCIVGQVGFTTEAIKQNVDTLLADLRKMKPAT--SKGSYVRKVTLSSTMGP- 220
Query: 316 KFKLDLSGL 324
+DLS L
Sbjct: 221 GLVIDLSTL 229
>gi|294787333|ref|ZP_06752586.1| ribosomal protein L1 [Parascardovia denticolens F0305]
gi|315227107|ref|ZP_07868894.1| 50S ribosomal protein L1 [Parascardovia denticolens DSM 10105 = JCM
12538]
gi|420236302|ref|ZP_14740788.1| 50S ribosomal protein L1 [Parascardovia denticolens IPLA 20019]
gi|294484689|gb|EFG32324.1| ribosomal protein L1 [Parascardovia denticolens F0305]
gi|315119557|gb|EFT82690.1| 50S ribosomal protein L1 [Parascardovia denticolens DSM 10105 = JCM
12538]
gi|391880478|gb|EIT88969.1| 50S ribosomal protein L1 [Parascardovia denticolens IPLA 20019]
Length = 230
Score = 44.7 bits (104), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 151 SFDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
+ HG ++ ++ F + A ++ G VGD + I+ + +G + F V+ P
Sbjct: 64 NLPHGTGKTARVLVFARGPQATAAVE-AGADEVGDDELIEKVSKGYLD---FDAVVATPD 119
Query: 209 ILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
++ + R+ +L R +P K+ T+ +D+ ++ G I++ + KD G F
Sbjct: 120 MMGKVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVSDIKGGRIEFRVDKD------GNLSF 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
IG+L +++ L +N + + +I +KP + +I R+ + S +P
Sbjct: 174 IIGKLSFAEKDLVENFRSVADEIRRLKPATV--KGRYIERVTMASTMNP 220
>gi|405982083|ref|ZP_11040407.1| 50S ribosomal protein L1 [Actinomyces neuii BVS029A5]
gi|404390874|gb|EJZ85940.1| 50S ribosomal protein L1 [Actinomyces neuii BVS029A5]
Length = 236
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 15/150 (10%)
Query: 151 SFDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
S HG ++ ++ F + E A Q D G VG + I+ +++G F + P
Sbjct: 63 SLPHGTGKTQRVLVFAA-GERAQQAIDAGADEVGAEELIEKVQKGYTD---FDVAVATPD 118
Query: 209 ILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
++ + R+ +L R +P K+ T+ +++ K ++ G I+Y + K F
Sbjct: 119 MMGKVGRLGRVLGPRGLMPNPKTGTVTMNVEKAVKEIKAGRIEYRVDKHSNLA------F 172
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ + EQL +N +L +I KP S
Sbjct: 173 AIGKVSFTAEQLTENYATVLDEILRAKPAS 202
>gi|291286302|ref|YP_003503118.1| 50S ribosomal protein L1 [Denitrovibrio acetiphilus DSM 12809]
gi|290883462|gb|ADD67162.1| ribosomal protein L1 [Denitrovibrio acetiphilus DSM 12809]
Length = 232
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 16/175 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G D ++ FC + + QD G VGD + I ++ G F V+ P ++A +
Sbjct: 69 GRDVKVLVFC-KGDKQKDAQDAGADFVGDDELIARVQDGWTD---FDKVVATPDMMAQVG 124
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L R +P K T+ D+ + K L+ G I++ + K G +G+
Sbjct: 125 KLGKVLGPRGLMPNPKVGTVTQDVAKVVKELKAGMIEFRVDK------VGIIHSVVGKKS 178
Query: 272 MSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLIE 326
+L+DN+ +L + +KP S ++ I + + P + KLD S ++
Sbjct: 179 FEDGKLKDNITALLDTLVKLKPASAK--GQYVRGIYISATMGP-RVKLDHSKIVN 230
>gi|335420812|ref|ZP_08551847.1| 50S ribosomal protein L1 [Salinisphaera shabanensis E1L3A]
gi|334894114|gb|EGM32321.1| 50S ribosomal protein L1 [Salinisphaera shabanensis E1L3A]
Length = 232
Score = 44.3 bits (103), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
+G +S+ +A +Q E A + + G +VG +D + ++ G + F V+ P +
Sbjct: 67 NGTGKSVRVAVFTQGENAEKAKAAGADIVGFNDLAEQVQAGEIN---FDMVVATPDAMPV 123
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
+ R+ +L K +P K+ T+ D+ K + G ++Y K G IG+
Sbjct: 124 VGRLGQILGPKGLMPNPKTGTVTTDVETAVKNAKAGQVQYRTDK------AGIIHCAIGK 177
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
+D L++NL ++AD+ KP +
Sbjct: 178 VDFENTALKENLAALIADLRKAKPAN 203
>gi|119025266|ref|YP_909111.1| 50S ribosomal protein L1 [Bifidobacterium adolescentis ATCC 15703]
gi|154486662|ref|ZP_02028069.1| hypothetical protein BIFADO_00482 [Bifidobacterium adolescentis
L2-32]
gi|160165676|sp|A0ZZZ6.1|RL1_BIFAA RecName: Full=50S ribosomal protein L1
gi|118764850|dbj|BAF39029.1| 50S ribosomal protein L1 [Bifidobacterium adolescentis ATCC 15703]
gi|154084525|gb|EDN83570.1| ribosomal protein L1 [Bifidobacterium adolescentis L2-32]
Length = 230
Score = 44.3 bits (103), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 69/141 (48%), Gaps = 11/141 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ ++ F ++ A + + G +VGD D ++ + G + F V+ P ++ +
Sbjct: 70 GKTAKVLVF-ARGPKATEALEAGADIVGDDDLVQKVADGFLD---FDSVVATPDMMGKVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
R+ +L R +P K+ T+ +D+ K ++ G K D + G F IG++
Sbjct: 126 RLGRVLGPRGLMPNPKTGTVTMDVTKAIKDIKGG-----KVDFRVDKNGNLSFLIGKMSF 180
Query: 273 SQEQLEDNLKRILADISTMKP 293
+++ L++N K + ++ +KP
Sbjct: 181 TEQALDENFKAVADEVKRLKP 201
>gi|401405412|ref|XP_003882156.1| hypothetical protein NCLIV_019130 [Neospora caninum Liverpool]
gi|325116570|emb|CBZ52124.1| hypothetical protein NCLIV_019130 [Neospora caninum Liverpool]
Length = 702
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 17/161 (10%)
Query: 158 RSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIR 217
R I AF + + AA L+ G +VG ++ I ++ F+ +I P ++A L R
Sbjct: 533 RVIAAFVDKKDEAAALE-AGADVVGAERILEEIRTDKIS---FEILISTPDMVARLTRYG 588
Query: 218 GLL--KKRIPTLKSQTLGVDLIGIAKRL--QTGIKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+L K +P TL D A RL QT I Y + F IG + MS
Sbjct: 589 KILGPKDLMPQAAWGTLTADFA-EAIRLYRQTTIPYKADR------FNIVHMPIGWVSMS 641
Query: 274 QEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+E+L +NL +A I++ +PP+ F+ ++ + S P
Sbjct: 642 KEELRENLDAAIASINSRRPPTA--GNKFLNKVHISSTMGP 680
>gi|313898208|ref|ZP_07831746.1| ribosomal protein L1 [Clostridium sp. HGF2]
gi|346317415|ref|ZP_08858901.1| 50S ribosomal protein L1 [Erysipelotrichaceae bacterium 2_2_44A]
gi|373122862|ref|ZP_09536721.1| ribosomal protein L1 [Erysipelotrichaceae bacterium 21_3]
gi|312956972|gb|EFR38602.1| ribosomal protein L1 [Clostridium sp. HGF2]
gi|345900505|gb|EGX70327.1| 50S ribosomal protein L1 [Erysipelotrichaceae bacterium 2_2_44A]
gi|371662510|gb|EHO27712.1| ribosomal protein L1 [Erysipelotrichaceae bacterium 21_3]
Length = 228
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 154 HGEDRS-IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG ++ + +Q + +D G VG + ++ I++G F ++ P ++ +
Sbjct: 67 HGTGKTQKVCVITQGPKEQEAKDAGADFVGGKELLEDIQKGWFD---FDVIVATPNMMGE 123
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
L ++ LL K +P K+ T+ +D+ + ++ G ++Y + K+ G + IG+
Sbjct: 124 LGKLGRLLGPKGLMPNPKTGTVTMDVAKAVEDIKKGKVEYRVDKE------GNINLMIGK 177
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
+ E+L DN +L IS +P +
Sbjct: 178 VSFDDEKLVDNFNALLKVISKARPAA 203
>gi|242620097|ref|YP_003002101.1| 50S ribosomal protein L1 [Aureococcus anophagefferens]
gi|239997342|gb|ACS36865.1| 50S ribosomal protein L1 [Aureococcus anophagefferens]
Length = 230
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 65/141 (46%), Gaps = 10/141 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D +I + ETA ++ G VG +D I+ I +G + F ++ P+++ L
Sbjct: 69 GKDINIAVLVADIETAPEILQAGANTVGSNDLIEEISKGNL---DFDLLLTTPEMMPRLT 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
++ +L R +P+ K+ T+ DL + G K + + G G++D
Sbjct: 126 KLGKVLGPRGLMPSTKAGTVTTDLKSSLADFKAG-----KVECRADKTGVVHILFGKMDF 180
Query: 273 SQEQLEDNLKRILADISTMKP 293
+E L +NL+ I I +P
Sbjct: 181 EKEALAENLRSIYDSILLNRP 201
>gi|392406588|ref|YP_006443196.1| 50S ribosomal protein L1 [Anaerobaculum mobile DSM 13181]
gi|390619724|gb|AFM20871.1| ribosomal protein L1 [Anaerobaculum mobile DSM 13181]
Length = 236
Score = 44.3 bits (103), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 39/220 (17%)
Query: 87 LQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIV 146
L+K K +++ +EA+ ++E LP A TVE+ + +DP
Sbjct: 12 LEKVDKTKLYGLREAVELLKE--------LPPAKFDETVEMHIRLN------VDPRHADQ 57
Query: 147 EVEH--SFDHG--EDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V S HG +++ ++ S E + ++ G VG D ++ IE G + F
Sbjct: 58 QVRGTVSLPHGTGQEKRVLVIAS-GEKVKEAEEAGADFVGGEDIVQKIEGGWLD---FDA 113
Query: 203 VICNPKILADLMRIRGLLKK------RIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDP 255
VI P D+MR+ G L + +P+ K+ T+ D+ K ++ G I++ + +
Sbjct: 114 VIATP----DMMRVVGRLGRILGPRGLMPSAKTGTVTFDIADAVKEIKAGRIEFRVDR-- 167
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G IG++ S + L DN K +L + +P +
Sbjct: 168 ----YGIIHAGIGKMSFSADMLFDNAKVLLRAVLRARPAA 203
>gi|315917861|ref|ZP_07914101.1| LSU ribosomal protein L1P [Fusobacterium gonidiaformans ATCC 25563]
gi|317059452|ref|ZP_07923937.1| LSU ribosomal protein L1P [Fusobacterium sp. 3_1_5R]
gi|313685128|gb|EFS21963.1| LSU ribosomal protein L1P [Fusobacterium sp. 3_1_5R]
gi|313691736|gb|EFS28571.1| LSU ribosomal protein L1P [Fusobacterium gonidiaformans ATCC 25563]
Length = 235
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 11/145 (7%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG +++ I + E + D G G + I I++G + F VI P ++
Sbjct: 68 HGTGKTVKILAITSGENVQKALDAGADYAGAEEYISQIQQGWLD---FDLVIATPDMMPK 124
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ R+ +L K +P KS T+ D+ G + G K + + D G IG+
Sbjct: 125 IGRLGKILGTKGLMPNPKSGTVTPDVAGAVSEFKKG-KLAFRVD----KVGSIHVAIGKA 179
Query: 271 DMSQEQLEDNLKRILADISTMKPPS 295
D S +++E+N K + I +KP +
Sbjct: 180 DFSADKIEENFKAFMDQIVRLKPAA 204
>gi|282879910|ref|ZP_06288635.1| ribosomal protein L1 [Prevotella timonensis CRIS 5C-B1]
gi|281306212|gb|EFA98247.1| ribosomal protein L1 [Prevotella timonensis CRIS 5C-B1]
Length = 230
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 25/153 (16%)
Query: 151 SFDHGEDR--SIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQF 202
+ HG + ++ C+ + AA ++ G VG + I+ I+ G ++TMP+
Sbjct: 64 TLPHGTGKVTRVLCLCTPDQEAAA-KEAGADYVGLDEYIEKIKGGWTDIDVIITMPS--- 119
Query: 203 VICNPKI--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
C K+ L ++ RGL+ P KS T+ +D+ K +++G K D +
Sbjct: 120 --CMGKVGPLGRVLGPRGLM----PNPKSGTVTMDVAKAVKEIKSG-----KIDFKVDKS 168
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
G IG++ M+ EQ+ DN K ++ + +KP
Sbjct: 169 GIIHTSIGKISMTPEQIYDNAKEFISTVIKLKP 201
>gi|242278649|ref|YP_002990778.1| 50S ribosomal protein L1 [Desulfovibrio salexigens DSM 2638]
gi|259646153|sp|C6C176.1|RL1_DESAD RecName: Full=50S ribosomal protein L1
gi|242121543|gb|ACS79239.1| ribosomal protein L1 [Desulfovibrio salexigens DSM 2638]
Length = 234
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G++ + F S E A+ ++ G VG D + ++ G + F I P ++A +
Sbjct: 69 GKEIRVACFVS-GEKEAEAKEAGADFVGGDDLVAKVKDGWLD---FDKAIATPDMMAKVG 124
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
+I +L R +P K+ T+ D+ K ++ G +++ + K G IG++
Sbjct: 125 QIGRVLGPRGLMPNAKTGTVTFDVASAVKEVKAGRVEFKVDKA------GVLHAPIGKVS 178
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
E+L +NLK +L ++ +KP S
Sbjct: 179 FGAEKLLENLKSLLETVNKLKPSS 202
>gi|206895615|ref|YP_002247280.1| 50S ribosomal protein L1 [Coprothermobacter proteolyticus DSM 5265]
gi|206738232|gb|ACI17310.1| ribosomal protein L1 [Coprothermobacter proteolyticus DSM 5265]
Length = 235
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 79/183 (43%), Gaps = 14/183 (7%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG + + + ++ E A + + G VG D ++ I++G + F VI P ++
Sbjct: 64 HGTGKPVRVLVLAKGEKATEAANAGADYVGADDLVEKIQQGWLD---FDVVIATPDMMGA 120
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ R+ +L R +P K+ T+ +D+ K + G K ++ D G IG+
Sbjct: 121 VGRLGKILGPRGLMPNPKAGTVTMDIEKTVKEFKAG-KVEVRNDKT----GNLHVPIGKA 175
Query: 271 DMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLIEKPKA 330
E+L DN + A I KP + ++ I L S P K+D IE+
Sbjct: 176 SFDNEKLLDNFYAVTAAIIHAKPAT--AKGTYVKTISLCSTMGPA-VKVDTRLAIEESLK 232
Query: 331 KEL 333
K+
Sbjct: 233 KQF 235
>gi|309778354|ref|ZP_07673279.1| ribosomal protein L1 [Erysipelotrichaceae bacterium 3_1_53]
gi|308913885|gb|EFP59700.1| ribosomal protein L1 [Erysipelotrichaceae bacterium 3_1_53]
Length = 228
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 70/146 (47%), Gaps = 13/146 (8%)
Query: 154 HGEDRS-IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG ++ + +Q + +D G VG + ++ I++G F ++ P ++ +
Sbjct: 67 HGTGKTQKVCVITQGPKEQEAKDAGADFVGGKELLEDIQKGWFD---FDVIVATPNMMGE 123
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
L ++ LL K +P K+ T+ +D+ + ++ G ++Y + K+ G + IG+
Sbjct: 124 LGKLGRLLGPKGLMPNPKTGTVTMDVAKAVEDIKKGKVEYRVDKE------GNINLMIGK 177
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
+ E+L DN +L IS +P +
Sbjct: 178 VSFDDEKLVDNFNALLKVISKARPAA 203
>gi|332289434|ref|YP_004420286.1| 50S ribosomal protein L1 [Gallibacterium anatis UMN179]
gi|330432330|gb|AEC17389.1| 50S ribosomal protein L1 [Gallibacterium anatis UMN179]
Length = 229
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG RS+ +A +Q A ++ G LVG D +++G + F VI +P D
Sbjct: 67 HGTGRSVRVAVFTQGANAEAAKEAGADLVGMEDLADQVKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G ++Y K+ G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKSGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+++ +Q+++NL+ +LA ++ KP +
Sbjct: 174 TIGKVNFEVDQIKENLQALLAALNKAKPST 203
>gi|407016656|gb|EKE30344.1| ribosomal protein L1 [uncultured bacterium (gcode 4)]
Length = 227
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/171 (22%), Positives = 75/171 (43%), Gaps = 26/171 (15%)
Query: 153 DHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
D G ++++IA G + G D ++ + +G + F I P ++
Sbjct: 80 DSGNEKALIA-------------AGATVAGGDDLLEAVAQGKID---FDVAIATPAMMRK 123
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ ++ +L K +P K+ T+G DL+ I K L G K+ K D Q G +G+L
Sbjct: 124 MWKVAKVLGPKGLMPNPKAGTVGDDLLSIIKELAAG-KFEFKNDKQ----GNVHSIVGKL 178
Query: 271 DMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDL 321
++++N++ + I +KP +I + + + P KLD+
Sbjct: 179 SFGSAKIKENIEAFVKAIKEVKPTG--VKSTYINTVYVCNAMGP-GIKLDV 226
>gi|320101663|ref|YP_004177254.1| 50S ribosomal protein L1P [Isosphaera pallida ATCC 43644]
gi|319748945|gb|ADV60705.1| LSU ribosomal protein L1P [Isosphaera pallida ATCC 43644]
Length = 227
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 76/171 (44%), Gaps = 21/171 (12%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNP-- 207
+ HG +++ +A +Q E A + + G LVG D I+ G++ F + P
Sbjct: 65 ALPHGIGKTVRVAVFAQGENAEKARAAGADLVGSDDLASQIKGGMMD---FDVALATPDM 121
Query: 208 -KILADLMRI---RGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYS 263
I+ L R+ RGL+ P+ +S T+ D+ + + G K + D G
Sbjct: 122 MGIVGPLGRVLGPRGLM----PSPRSGTVTTDIAAAVREFKAG-KIEFRNDKT----GNV 172
Query: 264 DFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+G+L+ QL DN++ + + ++KP + FI + + + SP
Sbjct: 173 AVPVGKLNFEVPQLADNIQAFMNHLRSLKPST--AKGAFIRSVTISATMSP 221
>gi|251799657|ref|YP_003014388.1| 50S ribosomal protein L1 [Paenibacillus sp. JDR-2]
gi|247547283|gb|ACT04302.1| ribosomal protein L1 [Paenibacillus sp. JDR-2]
Length = 230
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 63/123 (51%), Gaps = 20/123 (16%)
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVIC--NPKILADLMRIRGLL--KKRIPTLKSQTLGVD 235
VGDSD I I++G F+F +C P ++A++ ++ +L K +P K+ T+ D
Sbjct: 94 FVGDSDMINKIQQGW-----FEFDVCVATPDMMAEVGKLGRILGGKGLMPNPKAGTVTFD 148
Query: 236 LIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH--IGRLDMSQEQLEDNLKRILADISTMK 292
+ + ++ G I+Y + K Q H IG++ E+L +NLK ++ ++ K
Sbjct: 149 VTKAVQEIKAGKIEYRLDKAGQ--------IHAPIGKVSFDAEKLNENLKSLIDALNRAK 200
Query: 293 PPS 295
P +
Sbjct: 201 PAA 203
>gi|71278611|ref|YP_271416.1| 50S ribosomal protein L1 [Colwellia psychrerythraea 34H]
gi|91207348|sp|Q47UV6.1|RL1_COLP3 RecName: Full=50S ribosomal protein L1
gi|71144351|gb|AAZ24824.1| ribosomal protein L1 [Colwellia psychrerythraea 34H]
Length = 232
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
+G R + +A +Q E A + + G +VG D ++ G + F VI +P D
Sbjct: 67 NGTGREVRVAVFTQGENAEKAKAAGADIVGMEDLAAQVKAGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ D+ G K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKVGTVTPDVAGAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ D QL++NL+ +L + KP +
Sbjct: 174 TIGKADFEPAQLQENLESLLEALKKAKPAN 203
>gi|376286897|ref|YP_005159463.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae BH8]
gi|371584231|gb|AEX47896.1| 50S ribosomal protein L1 [Corynebacterium diphtheriae BH8]
Length = 235
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V S +G +S+ +A ++ E A + Q G +VG ++ I+ I G + F
Sbjct: 57 QLVRGTVSLPNGTGKSVRVAVFAEGEKAIEAQAAGADIVGTTELIEQITAGTIE---FDV 113
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
I P +A + R+ +L R +P K+ T+ D+ ++ G K S + D
Sbjct: 114 AIATPDQMAKVGRVARVLGPRGLMPNPKTGTVTNDVAKAIAEVKGG-KISFRVDKA---- 168
Query: 261 GYSDFH--IGRLDMSQEQLEDNLKRILADISTMKPPS 295
S+ H IG+ E+L +N +L +++ +KP S
Sbjct: 169 --SNLHAIIGKASFDAEKLAENYGALLDEVNRIKPSS 203
>gi|296395105|ref|YP_003659989.1| 50S ribosomal protein L1 [Segniliparus rotundus DSM 44985]
gi|296182252|gb|ADG99158.1| ribosomal protein L1 [Segniliparus rotundus DSM 44985]
Length = 235
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 154 HGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG ++ +I F E A Q Q G VG D I+ I+ G V F I P +A
Sbjct: 67 HGTGKTARVIVFAV-GEKAEQAQQAGADAVGSDDLIERIQGGWVD---FDAAIATPDQMA 122
Query: 212 DLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHI-- 267
+ R+ +L R +P K+ T+ D+ ++ G K + + D +S+ H+
Sbjct: 123 KVGRVARVLGPRGLMPNPKTGTVTADVSKAVADIKGG-KITFRVDK------HSNLHVVV 175
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPS 295
G+ ++EQL +N +L +++ KP +
Sbjct: 176 GKASFTKEQLVENYGAVLDEVTRSKPAA 203
>gi|72383406|ref|YP_292761.1| 50S ribosomal protein L1 [Prochlorococcus marinus str. NATL2A]
gi|124024992|ref|YP_001014108.1| 50S ribosomal protein L1 [Prochlorococcus marinus str. NATL1A]
gi|91207368|sp|Q46HH0.1|RL1_PROMT RecName: Full=50S ribosomal protein L1
gi|160166294|sp|A2C033.1|RL1_PROM1 RecName: Full=50S ribosomal protein L1
gi|72003256|gb|AAZ59058.1| LSU ribosomal protein L1P [Prochlorococcus marinus str. NATL2A]
gi|123960060|gb|ABM74843.1| 50S ribosomal protein L1 [Prochlorococcus marinus str. NATL1A]
Length = 235
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 58/135 (42%), Gaps = 10/135 (7%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
IA ++ E + G L G+ D + I +G + F +I P ++ + ++ +L
Sbjct: 74 IAVVTRGEKVNEATKAGADLAGEEDLVDSINKGEMN---FDLLISTPDMMPKVAKLGRVL 130
Query: 221 KKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLE 278
R +P K+ T+ DL G K + G K + D G G+ S+E L
Sbjct: 131 GPRGLMPNPKAGTVTTDLEGAIKEFKAG-KLEFRADKA----GIVHVRFGKASFSEEALL 185
Query: 279 DNLKRILADISTMKP 293
+NLK + I KP
Sbjct: 186 ENLKTLQTTIEKNKP 200
>gi|312880650|ref|ZP_07740450.1| LSU ribosomal protein L1P [Aminomonas paucivorans DSM 12260]
gi|310783941|gb|EFQ24339.1| LSU ribosomal protein L1P [Aminomonas paucivorans DSM 12260]
Length = 235
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R+ + + E + +D G VG D + IE G + F VI P D
Sbjct: 66 HGTGRTKRVLVIAGGEKVKEAEDAGADFVGGEDMVAKIEGGWLD---FDAVIATP----D 118
Query: 213 LMRIRGLLKKRI------PTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
+M++ G L K + P+ K+ T+ D+ ++ G +++ + K G +
Sbjct: 119 VMKVVGKLGKVLGPRGLMPSAKTNTVTFDVAAAIAEIKAGRVEFRVDKT------GITHN 172
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G+ S+EQLE+N +L I +P +
Sbjct: 173 AVGKASFSKEQLEENAATLLRAILKARPSA 202
>gi|282889739|ref|ZP_06298278.1| hypothetical protein pah_c004o102 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|338175978|ref|YP_004652788.1| 50S ribosomal protein L1 [Parachlamydia acanthamoebae UV-7]
gi|281500313|gb|EFB42593.1| hypothetical protein pah_c004o102 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|336480336|emb|CCB86934.1| 50S ribosomal protein L1 [Parachlamydia acanthamoebae UV-7]
Length = 233
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 200 FQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQE 257
F VI P ++ D+ ++ +L R +PT K+ T+ D++ L+ G K K D
Sbjct: 111 FNAVIATPDMMRDVGKLGKVLGPRGLMPTPKAGTVTNDIVKAINELKAG-KIEFKIDRH- 168
Query: 258 QDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKF 317
G + +G+L + ++LE+N++ L+ + KP + +F+ +++ S P F
Sbjct: 169 ---GVVNCMVGKLSFALDKLEENIQSFLSAVQKAKPAA--AKGEFLASMVISSTMGP-GF 222
Query: 318 KLDL 321
K+DL
Sbjct: 223 KIDL 226
>gi|148825208|ref|YP_001289961.1| 50S ribosomal protein L1 [Haemophilus influenzae PittEE]
gi|229846599|ref|ZP_04466707.1| 50S ribosomal protein L1 [Haemophilus influenzae 7P49H1]
gi|386265097|ref|YP_005828589.1| 50S ribosomal protein L1 [Haemophilus influenzae R2846]
gi|160166012|sp|A5U9X7.1|RL1_HAEIE RecName: Full=50S ribosomal protein L1
gi|148715368|gb|ABQ97578.1| 50S ribosomal protein L1 [Haemophilus influenzae PittEE]
gi|229810692|gb|EEP46410.1| 50S ribosomal protein L1 [Haemophilus influenzae 7P49H1]
gi|309972333|gb|ADO95534.1| 50S ribosomal subunit protein L1 [Haemophilus influenzae R2846]
Length = 229
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A ++ G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGREVRVAVFTQGANADAAKEAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S+ QL++NL+ +L ++ KP +
Sbjct: 174 TIGKANFSEVQLKENLQALLVALNKAKPTT 203
>gi|343085254|ref|YP_004774549.1| 50S ribosomal protein L1 [Cyclobacterium marinum DSM 745]
gi|342353788|gb|AEL26318.1| ribosomal protein L1 [Cyclobacterium marinum DSM 745]
Length = 232
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 17/153 (11%)
Query: 145 IVEVEHSFDHGEDRSIIAFCS--QHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V + H G++ ++ CS + E A Q G VG + I IE G +
Sbjct: 62 VVALPHGI--GKEVKVLVLCSPDKEEEAKQ---AGADFVGLDEYIAKIEGGWTDI---DV 113
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
+I P ++A + R+ +L R +P KS T+ +D+ ++ G K D + F
Sbjct: 114 IITTPNVMAKVGRLGRVLGPRGLMPNPKSGTVTLDVGKAVNEVKAG-----KIDFKVDKF 168
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
G +G+ S E++++N + ++ IS +KP
Sbjct: 169 GIIHASVGKASFSAEKIKENAEELIQTISKLKP 201
>gi|284039329|ref|YP_003389259.1| 50S ribosomal protein L1 [Spirosoma linguale DSM 74]
gi|283818622|gb|ADB40460.1| ribosomal protein L1 [Spirosoma linguale DSM 74]
Length = 232
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 78/168 (46%), Gaps = 15/168 (8%)
Query: 151 SFDHGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
+ HG +++ + C+ + + ++ G VG D I+ IE+G + +I P
Sbjct: 64 TLPHGTGKTVRVLVLCTPDK-ENEAKEAGADFVGLDDYIQKIEQGWTDI---DVIITMPN 119
Query: 209 ILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
++A + R+ +L R +P KS T+ D+ + ++ G K D + G
Sbjct: 120 VMAKVGRLGKVLGPRGLMPNPKSGTVTPDVAKAVREVKAG-----KIDFKVDKTGIIHTS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
IG++ + E+L +N + I+A + +KP S ++ I L S SP
Sbjct: 175 IGKVSFTPEKLAENAQEIIATLMRLKPSS--AKGTYVKTINLSSTMSP 220
>gi|150866550|ref|XP_001386189.2| hypothetical protein PICST_33547 [Scheffersomyces stipitis CBS
6054]
gi|149387806|gb|ABN68160.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 269
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 67/157 (42%), Gaps = 10/157 (6%)
Query: 160 IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGL 219
++ F Q E +++G VG D I+ I +G + + P+I+ DL I
Sbjct: 112 VMIFSLQDEKVKIAKELGATHVGGLDLIESISKGEIKLDKITHAFATPEIVKDLRAIARQ 171
Query: 220 L--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQL 277
+ K +P K T+ D+ ++ ++ S+ P +Q + IGR D S E++
Sbjct: 172 IGPKGLMPAAKKGTVSEDI-------ESLMQSSVGAYPFKQKEQHLSIPIGRCDFSDEEI 224
Query: 278 EDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
NLK I ++PP + I + L S P
Sbjct: 225 IKNLKAASEAIYGLQPPGT-RKPNLIGQTCLSSTLGP 260
>gi|397569886|gb|EJK47037.1| hypothetical protein THAOC_34274 [Thalassiosira oceanica]
Length = 352
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 17/154 (11%)
Query: 151 SFDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
+ HG ++ + F + A + ++ G G S I I G + +FQ + P
Sbjct: 153 TLPHGSGKTFGVAVFTDDEDLADEAREKGAVAAGGSSLIDSIRTGEMPTSSFQRTVATPD 212
Query: 209 I---LADLMRI---RGLLKKRIPTLKSQTLGVDLI-GIAKRLQTGIKYSMKKDPQEQDFG 261
+ LA + RI RGL+ P L + G LI G+ ++ Y +D G
Sbjct: 213 MVPQLAPIARILGPRGLMPN--PKLGTVLDGAALINGLLSQMSGTTNYRTDRD------G 264
Query: 262 YSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+GR + + DN++ ++ +I ++KP S
Sbjct: 265 VIRLGVGRASFGPDAILDNVRELMNEIQSIKPES 298
>gi|406884682|gb|EKD32038.1| hypothetical protein ACD_77C00185G0010 [uncultured bacterium]
Length = 233
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 15/165 (9%)
Query: 154 HGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG +++ + C+ + + ++ G VG D I+ I+ G + ++C P ++A
Sbjct: 67 HGTGKAVRVLVLCTP-DKENEAKEAGADFVGLDDFIEKIKGGWTDV---DVIVCTPSVMA 122
Query: 212 DLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGR 269
+ I +L R +P K+ T+ +D+ K ++ G K K D Q G IG+
Sbjct: 123 KIGAIGRILGPRGLMPNPKTGTVTMDVGNAVKEIKAG-KIDFKVDKQ----GIVHASIGK 177
Query: 270 LDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+ EQL +N I +KP + ++ I L S SP
Sbjct: 178 VSFEPEQLSENAIEFFNTIMKLKP--QALKGTYVKSIFLSSTMSP 220
>gi|375088192|ref|ZP_09734534.1| ribosomal protein L1 [Dolosigranulum pigrum ATCC 51524]
gi|374563022|gb|EHR34345.1| ribosomal protein L1 [Dolosigranulum pigrum ATCC 51524]
Length = 231
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 74/146 (50%), Gaps = 17/146 (11%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ +S++ F ++ + A ++ G VGDSD ++ ++ G + F V+ P ++A++
Sbjct: 70 GKTQSVVVF-AKGQAAKDAEEAGADFVGDSDLVEKVQGGWLD---FDIVVAAPDMMAEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH--IGR 269
++ +L K +P K+ T+ D+ + ++ G + Y + + ++ H IG+
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTPDVKKAVEDIKAGQVTYRLDRQ--------ANVHVPIGK 177
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
+ S EQL +NL I I +P S
Sbjct: 178 VSFSTEQLAENLVAIHDIIVKNRPAS 203
>gi|428768608|ref|YP_007160398.1| 50S ribosomal protein L1 [Cyanobacterium aponinum PCC 10605]
gi|428682887|gb|AFZ52354.1| LSU ribosomal protein L1P [Cyanobacterium aponinum PCC 10605]
Length = 235
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 84/202 (41%), Gaps = 13/202 (6%)
Query: 97 QFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDP-WT-HIVEVEHSFDH 154
+F+EALA + + + L AT + T +DP +T + S
Sbjct: 8 RFKEALAKVEAKAYEPLEALQLLKETATAKFDETAEVHIRLGIDPKYTDQQLRTTVSLPK 67
Query: 155 GEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADL 213
G +++ +A ++ E + + G LVGD D I I++G M F +I P ++ +
Sbjct: 68 GTGQTVRVAVITRGEKVKEASEGGADLVGDEDLIDEIQKG---MMDFDVLIATPDMMPKI 124
Query: 214 MRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P+ K T+ DL+G + G K + D G G+
Sbjct: 125 AKLGRVLGPKGLMPSPKGGTVTTDLVGAINEFKAG-KLEFRADRS----GIVHVMFGKAS 179
Query: 272 MSQEQLEDNLKRILADISTMKP 293
S L NLK I + +P
Sbjct: 180 FSANDLLTNLKAIQETVDRNRP 201
>gi|431792458|ref|YP_007219363.1| 50S ribosomal protein L1 [Desulfitobacterium dichloroeliminans LMG
P-21439]
gi|430782684|gb|AGA67967.1| ribosomal protein L1 [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 230
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ RS++ F ++ E A + + G VG D I IE+G F V+ P ++ +
Sbjct: 70 GKTRSVLVF-AKGEKAKEAEVAGADFVGAEDMIAKIEQGWFD---FDVVVATPDMMGMVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ D+ K ++ G I+Y K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTFDVEKAVKEIKAGKIEYRADKA------GIIHAPIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
S+EQL +N K + + KP +
Sbjct: 180 FSEEQLFENYKVLAETLLKAKPAA 203
>gi|269962517|ref|ZP_06176865.1| 50S ribosomal protein L1 [Vibrio harveyi 1DA3]
gi|269832712|gb|EEZ86823.1| 50S ribosomal protein L1 [Vibrio harveyi 1DA3]
Length = 233
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G +VG D + +++G + F V+ +P D
Sbjct: 67 HGTGREIRVAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S EQ+++NL+ +L + KP S
Sbjct: 174 TIGKANFSAEQIKENLESLLVALKKAKPSS 203
>gi|429740764|ref|ZP_19274440.1| ribosomal protein L1 [Porphyromonas catoniae F0037]
gi|429160300|gb|EKY02774.1| ribosomal protein L1 [Porphyromonas catoniae F0037]
Length = 231
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 78/178 (43%), Gaps = 24/178 (13%)
Query: 151 SFDHGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQF 202
+ HG + + +A C+ + A+ Q G VG + I+ I G ++TMP
Sbjct: 64 TLPHGTGKQVRVLALCTP-DKEAEAQAAGADYVGLDEYIEKIRGGWTEIDVIITMPAIMG 122
Query: 203 VICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
I L ++ RGL+ P KS T+ D+ K +++G K D + G
Sbjct: 123 KIGA---LGRVLGPRGLM----PNPKSGTVTNDVAAAVKEVKSG-----KIDFKVDKTGI 170
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
IG++ S EQ+ DN I++ + +KP + ++ I L S SP K+D
Sbjct: 171 VHTSIGKVSFSPEQIYDNAHEIISTLIRLKPTA--AKGTYVKSIYLSSTMSPS-IKID 225
>gi|422328927|ref|ZP_16409953.1| ribosomal protein L1 [Erysipelotrichaceae bacterium 6_1_45]
gi|371658549|gb|EHO23828.1| ribosomal protein L1 [Erysipelotrichaceae bacterium 6_1_45]
Length = 228
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 69/146 (47%), Gaps = 13/146 (8%)
Query: 154 HGEDRS-IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG ++ + +Q + +D G VG + ++ I +G F ++ P ++ +
Sbjct: 67 HGTGKTQKVCVITQGPKEQEAKDAGADFVGGKELLEDIRKGWFD---FDVIVATPNMMGE 123
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
L ++ LL K +P K+ T+ +D+ + ++ G ++Y + K+ G + IG+
Sbjct: 124 LGKLGRLLGPKGLMPNPKTGTVTMDVAKAVEDIKKGKVEYRVDKE------GNINLMIGK 177
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
+ E+L DN +L IS +P +
Sbjct: 178 VSFDDEKLVDNFNALLKVISKARPAA 203
>gi|350529657|ref|ZP_08908598.1| 50S ribosomal protein L1 [Vibrio rotiferianus DAT722]
Length = 233
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G +VG D + +++G + F V+ +P D
Sbjct: 67 HGTGREIRVAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S EQ+++NL+ +L + KP S
Sbjct: 174 TIGKANFSAEQIKENLESLLVALKKAKPSS 203
>gi|403382855|ref|ZP_10924912.1| 50S ribosomal protein L1 [Paenibacillus sp. JC66]
Length = 230
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 75/148 (50%), Gaps = 21/148 (14%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVIC--NPKILAD 212
G+ ++++ F ++ E A + + G VGD+D I I++G F F +C P ++ +
Sbjct: 70 GKTQTVLVF-AKGEKAKEAESAGADFVGDTDMINKIQQGW-----FGFDVCVATPDMMGE 123
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH--I 267
+ ++ LL + +P K+ T+ D+ + ++ G I+Y + + Q H I
Sbjct: 124 VGKLGRLLGGKGLMPNPKAGTVTFDVAKAVQEIKAGKIEYRLDRAGQ--------IHAPI 175
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPS 295
G+ S+EQL +NL+ ++ + KP S
Sbjct: 176 GKASFSEEQLAENLRALIDSLIRNKPAS 203
>gi|366089464|ref|ZP_09455937.1| 50S ribosomal protein L1 [Lactobacillus acidipiscis KCTC 13900]
Length = 229
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D++++ F + A + +D G +VGD D + I+ G + F I P ++A +
Sbjct: 70 GKDQTVVVFA-KGPKAQEAKDAGADVVGDDDLVARIQDGWL---DFDVAIATPDMMAQVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L K +P K+ T+ +D+ + G + Y +D G +G++
Sbjct: 126 RLGRVLGPKGLMPNPKTGTVTMDVNKAVTESKAGKVTYRTDRD------GNVHVPLGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGL 324
S++ ++ N + I I+ +P S +I + L S P LD+S L
Sbjct: 180 FSEDAIKGNFQTISDVITKARPASVK--GIYIQHVSLASTFGPS-VTLDISSL 229
>gi|78188332|ref|YP_378670.1| 50S ribosomal protein L1 [Chlorobium chlorochromatii CaD3]
gi|91207346|sp|Q3ATP8.1|RL1_CHLCH RecName: Full=50S ribosomal protein L1
gi|78170531|gb|ABB27627.1| LSU ribosomal protein L1P [Chlorobium chlorochromatii CaD3]
Length = 229
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 78/172 (45%), Gaps = 20/172 (11%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ S++ C + + A + ++ G VG + I I+ G + +I P ++ L
Sbjct: 68 GKTVSVLVICKETK-AEEAKEAGADFVGFEEYITKIQEGWTGV---DVIIATPDVMGQLG 123
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH--IGR 269
++ +L R +P KS T+ +D+ K ++ G I++ + K + H +G+
Sbjct: 124 KVAKILGPRGLMPNPKSGTVTMDVAKAVKEVKAGKIEFRVDK--------AGNIHAPVGK 175
Query: 270 LDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPE-KFKLD 320
+ E L N+ L ++ +KP + ++ I L S SP K K+D
Sbjct: 176 VSFDSEHLNTNIVAFLKEVVRLKPSA--AKGQYVQGIALSSTMSPSVKVKMD 225
>gi|303247800|ref|ZP_07334069.1| ribosomal protein L1 [Desulfovibrio fructosovorans JJ]
gi|302490884|gb|EFL50783.1| ribosomal protein L1 [Desulfovibrio fructosovorans JJ]
Length = 235
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 16/163 (9%)
Query: 137 KYMDPWTHIVEVEHSFDHGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGL 194
KY D +V S HG +S+ +AFC + + A+ ++ G + G + I+ I+ G
Sbjct: 53 KYSD---QMVRGAVSLPHGLGKSVRVVAFC-KGDKEAEAREAGADIAGGDELIEKIKGGF 108
Query: 195 VTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMK 252
+ F + P ++A + +I +L R +P K+ T+ D+ + L+ G K K
Sbjct: 109 LD---FDKAVATPDMMASVGKIGKILGPRGLMPNAKTGTVTFDIAKAVQELKAG-KVEFK 164
Query: 253 KDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
D G +G+ E+L DN + ++ + +KP +
Sbjct: 165 VDKA----GVLHVPLGKRSFGAEKLLDNFRALIDTVMRLKPSA 203
>gi|419536406|ref|ZP_14075887.1| 50S ribosomal protein L1 [Campylobacter coli 111-3]
gi|380518174|gb|EIA44273.1| 50S ribosomal protein L1 [Campylobacter coli 111-3]
Length = 233
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 112 TMYNLPRAFIGATVEISTTTHQKKVKYMDP--WTHIVEVEHSFDHGEDRSI-IAFCSQHE 168
T+ NL A TVEI+ + +DP +V G + + +A ++
Sbjct: 29 TVRNLKSAKFDETVEIALKLN------VDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDA 82
Query: 169 TAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL--KKRIPT 226
A + ++ G +VG D I+ I++G + F +I P ++ + ++ +L K +P
Sbjct: 83 KADEAKNAGADIVGSDDLIEEIQKGNMN---FDVLIATPNLMGLVGKVGRILGPKGLMPN 139
Query: 227 LKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILA 286
K+ T+ +D+ ++G + + + D Q G +G++ S+EQL DN+ +
Sbjct: 140 PKTGTVTMDVAQAVNNAKSG-QVNFRVDKQ----GNIHAGLGKVSFSKEQLWDNISTFIK 194
Query: 287 DISTMKPPS 295
I+ KP +
Sbjct: 195 AINKHKPAA 203
>gi|404406318|ref|ZP_10997902.1| 50S ribosomal protein L1 [Alistipes sp. JC136]
Length = 232
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 151 SFDHGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
+ HG +++ + C+ E A+ Q G VG + + I+ G + +IC P
Sbjct: 64 TLPHGTGKTVRVLVLCTP-EKEAEAQAAGADYVGLDEYVDKIKAGWTDV---DVIICTPN 119
Query: 209 ILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
++ + + +L R +P K+ T+ +++ ++ G K D + FG
Sbjct: 120 VMGKVGALGRILGPRGLMPNPKTGTVTMEVGKAVGEVKAG-----KIDFKVDKFGIIHTT 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+G++ S EQ+ +N K +L I +KP + ++ I L + SP
Sbjct: 175 VGKVSFSAEQIVENAKEVLNMIIKLKPAA--AKGSYVKSIYLSTTMSP 220
>gi|156972588|ref|YP_001443495.1| 50S ribosomal protein L1 [Vibrio harveyi ATCC BAA-1116]
gi|262392944|ref|YP_003284798.1| 50S ribosomal protein L1 [Vibrio sp. Ex25]
gi|269965857|ref|ZP_06179951.1| 50S ribosomal protein L1 [Vibrio alginolyticus 40B]
gi|388602982|ref|ZP_10161378.1| 50S ribosomal protein L1 [Vibrio campbellii DS40M4]
gi|424031804|ref|ZP_17771232.1| ribosomal protein L1 [Vibrio cholerae HENC-01]
gi|424044873|ref|ZP_17782448.1| ribosomal protein L1 [Vibrio cholerae HENC-03]
gi|444427519|ref|ZP_21222897.1| 50S ribosomal protein L1 [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|451976189|ref|ZP_21927356.1| 50S ribosomal protein L1 [Vibrio alginolyticus E0666]
gi|166219594|sp|A7MXE3.1|RL1_VIBHB RecName: Full=50S ribosomal protein L1
gi|156524182|gb|ABU69268.1| hypothetical protein VIBHAR_00228 [Vibrio harveyi ATCC BAA-1116]
gi|262336538|gb|ACY50333.1| LSU ribosomal protein L1p (L10Ae) [Vibrio sp. Ex25]
gi|269829521|gb|EEZ83761.1| 50S ribosomal protein L1 [Vibrio alginolyticus 40B]
gi|408877167|gb|EKM16260.1| ribosomal protein L1 [Vibrio cholerae HENC-01]
gi|408887323|gb|EKM25939.1| ribosomal protein L1 [Vibrio cholerae HENC-03]
gi|444239222|gb|ELU50795.1| 50S ribosomal protein L1 [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|451929859|gb|EMD77586.1| 50S ribosomal protein L1 [Vibrio alginolyticus E0666]
Length = 233
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G +VG D + +++G + F V+ +P D
Sbjct: 67 HGTGREIRVAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S EQ+++NL+ +L + KP S
Sbjct: 174 TIGKANFSAEQIKENLEALLVALKKAKPSS 203
>gi|57504726|ref|ZP_00370780.1| ribosomal protein L1 [Campylobacter coli RM2228]
gi|305433030|ref|ZP_07402186.1| 50S ribosomal protein L1 [Campylobacter coli JV20]
gi|419537801|ref|ZP_14077169.1| 50S ribosomal protein L1 [Campylobacter coli 90-3]
gi|419540576|ref|ZP_14079810.1| 50S ribosomal protein L1 [Campylobacter coli Z163]
gi|419543177|ref|ZP_14082269.1| 50S ribosomal protein L1 [Campylobacter coli 2548]
gi|419544760|ref|ZP_14083706.1| 50S ribosomal protein L1 [Campylobacter coli 2553]
gi|419546606|ref|ZP_14085359.1| 50S ribosomal protein L1 [Campylobacter coli 2680]
gi|419548196|ref|ZP_14086827.1| 50S ribosomal protein L1 [Campylobacter coli 2685]
gi|419550960|ref|ZP_14089437.1| 50S ribosomal protein L1 [Campylobacter coli 2688]
gi|419553375|ref|ZP_14091622.1| 50S ribosomal protein L1 [Campylobacter coli 2692]
gi|419554379|ref|ZP_14092523.1| 50S ribosomal protein L1 [Campylobacter coli 2698]
gi|419555915|ref|ZP_14093915.1| 50S ribosomal protein L1 [Campylobacter coli 84-2]
gi|419558022|ref|ZP_14095908.1| 50S ribosomal protein L1 [Campylobacter coli 80352]
gi|419561290|ref|ZP_14098908.1| 50S ribosomal protein L1 [Campylobacter coli 86119]
gi|419561840|ref|ZP_14099368.1| 50S ribosomal protein L1 [Campylobacter coli 1091]
gi|419564050|ref|ZP_14101435.1| 50S ribosomal protein L1 [Campylobacter coli 1098]
gi|419565874|ref|ZP_14103142.1| 50S ribosomal protein L1 [Campylobacter coli 1148]
gi|419568353|ref|ZP_14105493.1| 50S ribosomal protein L1 [Campylobacter coli 1417]
gi|419574125|ref|ZP_14110894.1| 50S ribosomal protein L1 [Campylobacter coli 1891]
gi|419574798|ref|ZP_14111498.1| 50S ribosomal protein L1 [Campylobacter coli 1909]
gi|419577767|ref|ZP_14114311.1| 50S ribosomal protein L1 [Campylobacter coli 59-2]
gi|419578638|ref|ZP_14115066.1| 50S ribosomal protein L1 [Campylobacter coli 1948]
gi|419582083|ref|ZP_14118346.1| 50S ribosomal protein L1 [Campylobacter coli 1957]
gi|419585107|ref|ZP_14121170.1| 50S ribosomal protein L1 [Campylobacter coli 202/04]
gi|419590765|ref|ZP_14126128.1| 50S ribosomal protein L1 [Campylobacter coli 37/05]
gi|419593644|ref|ZP_14128856.1| 50S ribosomal protein L1 [Campylobacter coli LMG 9854]
gi|419594972|ref|ZP_14130089.1| 50S ribosomal protein L1 [Campylobacter coli LMG 23336]
gi|419597393|ref|ZP_14132368.1| 50S ribosomal protein L1 [Campylobacter coli LMG 23341]
gi|419599495|ref|ZP_14134349.1| 50S ribosomal protein L1 [Campylobacter coli LMG 23342]
gi|419599927|ref|ZP_14134706.1| 50S ribosomal protein L1 [Campylobacter coli LMG 23344]
gi|419602309|ref|ZP_14136888.1| 50S ribosomal protein L1 [Campylobacter coli 151-9]
gi|419604992|ref|ZP_14139446.1| 50S ribosomal protein L1 [Campylobacter coli LMG 9853]
gi|419606623|ref|ZP_14140983.1| 50S ribosomal protein L1 [Campylobacter coli LMG 9860]
gi|419608561|ref|ZP_14142748.1| 50S ribosomal protein L1 [Campylobacter coli H6]
gi|419610052|ref|ZP_14144124.1| 50S ribosomal protein L1 [Campylobacter coli H8]
gi|419613267|ref|ZP_14147115.1| 50S ribosomal protein L1 [Campylobacter coli H9]
gi|419614291|ref|ZP_14148077.1| 50S ribosomal protein L1 [Campylobacter coli H56]
gi|419616481|ref|ZP_14150128.1| 50S ribosomal protein L1 [Campylobacter coli Z156]
gi|57019382|gb|EAL56080.1| ribosomal protein L1 [Campylobacter coli RM2228]
gi|304443731|gb|EFM36388.1| 50S ribosomal protein L1 [Campylobacter coli JV20]
gi|380516342|gb|EIA42475.1| 50S ribosomal protein L1 [Campylobacter coli Z163]
gi|380519687|gb|EIA45753.1| 50S ribosomal protein L1 [Campylobacter coli 90-3]
gi|380520879|gb|EIA46644.1| 50S ribosomal protein L1 [Campylobacter coli 2548]
gi|380522282|gb|EIA47974.1| 50S ribosomal protein L1 [Campylobacter coli 2680]
gi|380524791|gb|EIA50374.1| 50S ribosomal protein L1 [Campylobacter coli 2553]
gi|380527823|gb|EIA53172.1| 50S ribosomal protein L1 [Campylobacter coli 2685]
gi|380528898|gb|EIA54109.1| 50S ribosomal protein L1 [Campylobacter coli 2692]
gi|380529390|gb|EIA54551.1| 50S ribosomal protein L1 [Campylobacter coli 2688]
gi|380533129|gb|EIA58089.1| 50S ribosomal protein L1 [Campylobacter coli 2698]
gi|380535382|gb|EIA60093.1| 50S ribosomal protein L1 [Campylobacter coli 84-2]
gi|380535983|gb|EIA60651.1| 50S ribosomal protein L1 [Campylobacter coli 86119]
gi|380540277|gb|EIA64589.1| 50S ribosomal protein L1 [Campylobacter coli 80352]
gi|380542481|gb|EIA66714.1| 50S ribosomal protein L1 [Campylobacter coli 1091]
gi|380543217|gb|EIA67436.1| 50S ribosomal protein L1 [Campylobacter coli 1098]
gi|380545911|gb|EIA69877.1| 50S ribosomal protein L1 [Campylobacter coli 1417]
gi|380547866|gb|EIA71780.1| 50S ribosomal protein L1 [Campylobacter coli 1148]
gi|380550128|gb|EIA73822.1| 50S ribosomal protein L1 [Campylobacter coli 1891]
gi|380554463|gb|EIA77925.1| 50S ribosomal protein L1 [Campylobacter coli 1909]
gi|380556420|gb|EIA79671.1| 50S ribosomal protein L1 [Campylobacter coli 59-2]
gi|380556605|gb|EIA79850.1| 50S ribosomal protein L1 [Campylobacter coli 1957]
gi|380559227|gb|EIA82389.1| 50S ribosomal protein L1 [Campylobacter coli 1948]
gi|380563015|gb|EIA85862.1| 50S ribosomal protein L1 [Campylobacter coli 202/04]
gi|380569508|gb|EIA91947.1| 50S ribosomal protein L1 [Campylobacter coli LMG 9854]
gi|380569908|gb|EIA92340.1| 50S ribosomal protein L1 [Campylobacter coli 37/05]
gi|380573493|gb|EIA95635.1| 50S ribosomal protein L1 [Campylobacter coli LMG 23341]
gi|380574121|gb|EIA96234.1| 50S ribosomal protein L1 [Campylobacter coli LMG 23342]
gi|380574842|gb|EIA96935.1| 50S ribosomal protein L1 [Campylobacter coli LMG 23336]
gi|380578960|gb|EIB00773.1| 50S ribosomal protein L1 [Campylobacter coli LMG 9853]
gi|380581299|gb|EIB03026.1| 50S ribosomal protein L1 [Campylobacter coli 151-9]
gi|380583905|gb|EIB05414.1| 50S ribosomal protein L1 [Campylobacter coli LMG 23344]
gi|380585187|gb|EIB06552.1| 50S ribosomal protein L1 [Campylobacter coli H6]
gi|380586781|gb|EIB08054.1| 50S ribosomal protein L1 [Campylobacter coli LMG 9860]
gi|380588185|gb|EIB09324.1| 50S ribosomal protein L1 [Campylobacter coli H9]
gi|380590613|gb|EIB11617.1| 50S ribosomal protein L1 [Campylobacter coli H8]
gi|380592902|gb|EIB13754.1| 50S ribosomal protein L1 [Campylobacter coli H56]
gi|380595519|gb|EIB16249.1| 50S ribosomal protein L1 [Campylobacter coli Z156]
Length = 233
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 112 TMYNLPRAFIGATVEISTTTHQKKVKYMDP--WTHIVEVEHSFDHGEDRSI-IAFCSQHE 168
T+ NL A TVEI+ + +DP +V G + + +A ++
Sbjct: 29 TVRNLKSAKFDETVEIALKLN------VDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDA 82
Query: 169 TAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL--KKRIPT 226
A + ++ G +VG D I+ I++G + F +I P ++ + ++ +L K +P
Sbjct: 83 KADEAKNAGADIVGSDDLIEEIQKGNMN---FDVLIATPNLMGLVGKVGRILGPKGLMPN 139
Query: 227 LKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILA 286
K+ T+ +D+ ++G + + + D Q G +G++ S+EQL DN+ +
Sbjct: 140 PKTGTVTMDVAQAVNNAKSG-QVNFRVDKQ----GNIHAGLGKVSFSKEQLWDNISTFIK 194
Query: 287 DISTMKPPS 295
I+ KP +
Sbjct: 195 AINKHKPAA 203
>gi|374853314|dbj|BAL56226.1| 50S ribosomal protein L1 [uncultured candidate division OP1
bacterium]
gi|374855328|dbj|BAL58188.1| 50S ribosomal protein L1 [uncultured candidate division OP1
bacterium]
gi|374857047|dbj|BAL59900.1| 50S ribosomal protein L1 [uncultured candidate division OP1
bacterium]
Length = 237
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 13/154 (8%)
Query: 144 HIVEVEHSFDHGEDR--SIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
H + + HG + +++AF ++ + + Q+ G G D +K IE G + F
Sbjct: 56 HRIRGTVTLPHGTGKPVTVLAF-AKGDKLKEAQEAGADFAGGEDLVKRIEEGWME---FD 111
Query: 202 FVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQD 259
V+ P ++ + ++ +L R +P+ KS T+ D+ K L+ G K + D +
Sbjct: 112 RVVATPDMMGIVSKLGKVLGPRGLMPSPKSGTVTPDIGAAIKELKRG-KLEFRLD----E 166
Query: 260 FGYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
+G GR S QL++NL + A I KP
Sbjct: 167 YGNVHSTFGRCSFSVAQLKENLVALAAAILDEKP 200
>gi|260774682|ref|ZP_05883587.1| LSU ribosomal protein L1p (L10Ae) [Vibrio coralliilyticus ATCC
BAA-450]
gi|343502509|ref|ZP_08740359.1| 50S ribosomal protein L1 [Vibrio tubiashii ATCC 19109]
gi|418480055|ref|ZP_13049122.1| 50S ribosomal protein L1 [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|260609401|gb|EEX35550.1| LSU ribosomal protein L1p (L10Ae) [Vibrio coralliilyticus ATCC
BAA-450]
gi|342814234|gb|EGU49182.1| 50S ribosomal protein L1 [Vibrio tubiashii ATCC 19109]
gi|384572326|gb|EIF02845.1| 50S ribosomal protein L1 [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 234
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G +VG D + +++G + F V+ +P D
Sbjct: 67 HGTGREIRVAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S EQ+++NL+ +L + KP S
Sbjct: 174 TIGKANFSAEQIKENLEALLVALKKAKPSS 203
>gi|169776503|ref|XP_001822718.1| mitochondrial 54S ribosomal protein MRPL1 [Aspergillus oryzae
RIB40]
gi|238503209|ref|XP_002382838.1| mitochondrial 54S ribosomal protein MRPL1 [Aspergillus flavus
NRRL3357]
gi|83771453|dbj|BAE61585.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220691648|gb|EED47996.1| mitochondrial large ribosomal subunit protein L1, putative
[Aspergillus flavus NRRL3357]
gi|391873910|gb|EIT82910.1| ribosomal protein [Aspergillus oryzae 3.042]
Length = 302
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 75/175 (42%), Gaps = 35/175 (20%)
Query: 125 VEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFC---SQHETAAQLQDMGVALV 181
+ + T ++ M + H V+ E I C S+HE A+ G LV
Sbjct: 104 IRLKTMKDGPVIRNMLRFPHSVQTESR--------ICVVCPAGSRHEKEARAA--GAVLV 153
Query: 182 GDSDTIKGIERGLVTMPTFQFVICNPKILADLMRI--------RGLLKKRIPTLKSQTLG 233
G+ + +++G++ F +IC+P L L R RGL+ P+ K+ T+
Sbjct: 154 GEQEVFDNVKKGIIE---FDRLICHPDSLEALNRAGLGRVLGPRGLM----PSAKTGTVV 206
Query: 234 VDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADI 288
D+ + L+ G Y +E+D IG+L + EQL DNL+ L I
Sbjct: 207 EDVASRVEMLRGGTVY------RERD-AVIRLPIGQLAFTPEQLRDNLRATLEQI 254
>gi|421254761|ref|ZP_15709494.1| 50S ribosomal protein L1 [Pasteurella multocida subsp. multocida
str. Anand1_buffalo]
gi|421264518|ref|ZP_15715494.1| 50S ribosomal protein L1 [Pasteurella multocida subsp. multocida
str. P52VAC]
gi|401688123|gb|EJS83783.1| 50S ribosomal protein L1 [Pasteurella multocida subsp. multocida
str. P52VAC]
gi|401691780|gb|EJS86545.1| 50S ribosomal protein L1 [Pasteurella multocida subsp. multocida
str. Anand1_buffalo]
Length = 229
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 21/137 (15%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG RS+ +A +Q A ++ G LVG D + +++G + F VI +P D
Sbjct: 67 HGTGRSVRVAVFTQGANAEAAKEAGADLVGMEDLAELVKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G ++Y K+ G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKVGTVTPNVTDAVKNAKSGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLK 282
IG+++ S+EQL++NL+
Sbjct: 174 TIGKVNFSEEQLKENLQ 190
>gi|419588460|ref|ZP_14124282.1| 50S ribosomal protein L1 [Campylobacter coli 317/04]
gi|380570163|gb|EIA92593.1| 50S ribosomal protein L1 [Campylobacter coli 317/04]
Length = 233
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 19/189 (10%)
Query: 112 TMYNLPRAFIGATVEISTTTHQKKVKYMDP--WTHIVEVEHSFDHGEDRSI-IAFCSQHE 168
T+ NL A TVEI+ + +DP +V G + + +A ++
Sbjct: 29 TVRNLKSAKFDETVEIALKLN------VDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDA 82
Query: 169 TAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL--KKRIPT 226
A + ++ G +VG D I+ I++G + F +I P ++ + ++ +L K +P
Sbjct: 83 KADEAKNAGADIVGSDDLIEEIQKGNMN---FDVLIATPNLMGLVGKVGRILGPKGLMPN 139
Query: 227 LKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILA 286
K+ T+ +D+ ++G + + + D Q G +G++ S+EQL DN+ +
Sbjct: 140 PKTGTVTMDVAQAVNNAKSG-QVNFRVDKQ----GNIHAGLGKVSFSKEQLWDNISTFIK 194
Query: 287 DISTMKPPS 295
I+ KP +
Sbjct: 195 AINKHKPAA 203
>gi|254361444|ref|ZP_04977584.1| ribosomal protein L1 [Mannheimia haemolytica PHL213]
gi|261491945|ref|ZP_05988522.1| ribosomal protein L1 [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261496252|ref|ZP_05992657.1| ribosomal protein L1 [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|452744840|ref|ZP_21944680.1| 50S ribosomal protein L1 [Mannheimia haemolytica serotype 6 str.
H23]
gi|153092954|gb|EDN73980.1| ribosomal protein L1 [Mannheimia haemolytica PHL213]
gi|261308083|gb|EEY09381.1| ribosomal protein L1 [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261312412|gb|EEY13538.1| ribosomal protein L1 [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|452087082|gb|EME03465.1| 50S ribosomal protein L1 [Mannheimia haemolytica serotype 6 str.
H23]
Length = 229
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R+ +A +Q A + G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGRTARVAVFTQGANAEAAKAAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ D S EQL+DNL +LA ++ KP +
Sbjct: 174 TIGKADFSAEQLKDNLNALLAALTKAKPTT 203
>gi|386835630|ref|YP_006240950.1| 50S ribosomal protein L1 [Pasteurella multocida subsp. multocida
str. 3480]
gi|385202336|gb|AFI47191.1| ribosomal protein L1 [Pasteurella multocida subsp. multocida str.
3480]
Length = 229
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 21/137 (15%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG RS+ +A +Q A ++ G LVG D + +++G + F VI +P D
Sbjct: 67 HGTGRSVRVAVFTQGANAEAAKEAGADLVGMEDLAELVKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G ++Y K+ G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKVGTVTPNVADAVKNAKSGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLK 282
IG+++ S+EQL++NL+
Sbjct: 174 TIGKVNFSEEQLKENLQ 190
>gi|298531095|ref|ZP_07018496.1| ribosomal protein L1 [Desulfonatronospira thiodismutans ASO3-1]
gi|298509118|gb|EFI33023.1| ribosomal protein L1 [Desulfonatronospira thiodismutans ASO3-1]
Length = 234
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 70/156 (44%), Gaps = 13/156 (8%)
Query: 144 HIVEVEHSFDHG--EDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
+V S HG +D ++AFC + E + + G G + ++ I G + F
Sbjct: 57 QMVRGACSLPHGLGKDVRVVAFC-KGEKENEALEAGADAAGGEELVEKIRGGWLE---FD 112
Query: 202 FVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQD 259
+ P ++A + +I +L R +P K+ T+ DL K L+ G K D +
Sbjct: 113 KAVATPDMMAQVGKIGRVLGPRGLMPNAKTGTVTFDLANTIKELKAG-----KVDFKVDR 167
Query: 260 FGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
G +G++ +++ DNLK ++ + +KP +
Sbjct: 168 TGIIHAPLGKVSFGPDKIRDNLKALVETLQKLKPAT 203
>gi|420151784|ref|ZP_14658876.1| ribosomal protein L1 [Actinomyces massiliensis F0489]
gi|394766168|gb|EJF47332.1| ribosomal protein L1 [Actinomyces massiliensis F0489]
Length = 229
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 72/157 (45%), Gaps = 15/157 (9%)
Query: 144 HIVEVEHSFDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
+V S HG ++ ++ F +Q E A Q G VG D I + G F
Sbjct: 57 QMVRGTVSLPHGTGKTARVVVF-AQGERAEQALAAGADEVGSDDLIAKVAGGYTD---FD 112
Query: 202 FVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQ 258
+ P ++ + R+ +L R +P K+ T+ +D+ ++ G I++ + +
Sbjct: 113 AAVATPDLMGKVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVTDIKGGRIEFRVDRAANL- 171
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+F IG++ +QEQL +N + +L ++ +KP +
Sbjct: 172 -----NFIIGKVSFTQEQLTENFQAVLDEVVRLKPST 203
>gi|419644845|ref|ZP_14176417.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
9081]
gi|419659722|ref|ZP_14190238.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
2008-979]
gi|380621334|gb|EIB40145.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
9081]
gi|380638673|gb|EIB56211.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
2008-979]
Length = 233
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 69/137 (50%), Gaps = 10/137 (7%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A ++ A + ++ G +VG D ++ I++G + F +I P ++ + ++ +L
Sbjct: 75 VAVIAKDAKADEAKNAGADIVGSDDLVEEIQKGNMN---FDVLIATPNLMGLVGKVGRIL 131
Query: 221 --KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLE 278
K +P K+ T+ +D++ ++G + + + D Q G +G++ S+EQL
Sbjct: 132 GPKGLMPNPKTGTVTMDVVQAVNNAKSG-QVNFRVDKQ----GNIHAGLGKVSFSKEQLW 186
Query: 279 DNLKRILADISTMKPPS 295
DN+ + I+ KP +
Sbjct: 187 DNVSTFVKAINKHKPAA 203
>gi|15603607|ref|NP_246681.1| 50S ribosomal protein L1 [Pasteurella multocida subsp. multocida
str. Pm70]
gi|378775607|ref|YP_005177850.1| 50S ribosomal protein L1 [Pasteurella multocida 36950]
gi|383311616|ref|YP_005364426.1| 50S ribosomal protein L1 [Pasteurella multocida subsp. multocida
str. HN06]
gi|417851851|ref|ZP_12497527.1| 50S ribosomal protein L1 [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
gi|417854622|ref|ZP_12499907.1| 50S ribosomal protein L1 [Pasteurella multocida subsp. multocida
str. Anand1_goat]
gi|425064463|ref|ZP_18467588.1| LSU ribosomal protein L1p (L10Ae) [Pasteurella multocida subsp.
gallicida X73]
gi|425066620|ref|ZP_18469740.1| LSU ribosomal protein L1p (L10Ae) [Pasteurella multocida subsp.
gallicida P1059]
gi|33301468|sp|Q9CK86.1|RL1_PASMU RecName: Full=50S ribosomal protein L1
gi|12722157|gb|AAK03826.1| RpL1 [Pasteurella multocida subsp. multocida str. Pm70]
gi|338217631|gb|EGP03482.1| 50S ribosomal protein L1 [Pasteurella multocida subsp. multocida
str. Anand1_goat]
gi|338218327|gb|EGP04103.1| 50S ribosomal protein L1 [Pasteurella multocida subsp. gallicida
str. Anand1_poultry]
gi|356598155|gb|AET16881.1| 50S ribosomal protein L1 [Pasteurella multocida 36950]
gi|380872888|gb|AFF25255.1| 50S ribosomal protein L1 [Pasteurella multocida subsp. multocida
str. HN06]
gi|404380953|gb|EJZ77441.1| LSU ribosomal protein L1p (L10Ae) [Pasteurella multocida subsp.
gallicida X73]
gi|404381214|gb|EJZ77696.1| LSU ribosomal protein L1p (L10Ae) [Pasteurella multocida subsp.
gallicida P1059]
Length = 229
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 21/137 (15%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG RS+ +A +Q A ++ G LVG D + +++G + F VI +P D
Sbjct: 67 HGTGRSVRVAVFTQGANAEAAKEAGADLVGMEDLAELVKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G ++Y K+ G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKVGTVTPNVADAVKNAKSGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLK 282
IG+++ S+EQL++NL+
Sbjct: 174 TIGKVNFSEEQLKENLQ 190
>gi|326802936|ref|YP_004320754.1| 50S ribosomal protein L1 [Aerococcus urinae ACS-120-V-Col10a]
gi|326651586|gb|AEA01769.1| ribosomal protein L1 [Aerococcus urinae ACS-120-V-Col10a]
Length = 233
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 67/144 (46%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ ++++ F Q E A + +D G VGD D ++ I G + F V+ P ++ +
Sbjct: 70 GKSQTVLVFA-QGEKAQEAKDAGADYVGDDDLVQKINDGWM---DFDVVVATPDMMGKIG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L K +P K+ T+ D+ ++ G I+Y + + G IG++
Sbjct: 126 RLGRVLGPKGLMPNPKTGTVTQDVTKAVNDIKAGQIEY------RADNGGNVHTLIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
S E L +N K I + KP +
Sbjct: 180 FSTEDLLENFKAIHETLVREKPAA 203
>gi|33152870|ref|NP_874223.1| 50S ribosomal protein L1 [Haemophilus ducreyi 35000HP]
gi|34588117|sp|O32614.2|RL1_HAEDU RecName: Full=50S ribosomal protein L1
gi|33149095|gb|AAP96612.1| 50S ribosomal protein L1 [Haemophilus ducreyi 35000HP]
Length = 229
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG RS +A +Q A + G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGRSARVAVFTQGANAEAAKAAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ +++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTLNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++D S+ QL++NL+ +LA ++ KP +
Sbjct: 174 TIGKVDFSEVQLKENLQALLAALNKAKPTT 203
>gi|334364367|ref|ZP_08513359.1| ribosomal protein L1 [Alistipes sp. HGB5]
gi|390947275|ref|YP_006411035.1| 50S ribosomal protein L1 [Alistipes finegoldii DSM 17242]
gi|313159562|gb|EFR58925.1| ribosomal protein L1 [Alistipes sp. HGB5]
gi|390423844|gb|AFL78350.1| ribosomal protein L1 [Alistipes finegoldii DSM 17242]
Length = 232
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 15/172 (8%)
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVI 204
+V + H G+ ++ C+ E A+ Q G VG + + I+ G + +I
Sbjct: 62 VVTLPHG--TGKQVRVLVLCTP-EKEAEAQAAGADYVGLDEFVDKIKGGWTDV---DVII 115
Query: 205 CNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
C P ++ + + +L R +P K+ T+ +++ + +++G K D + FG
Sbjct: 116 CTPNVMGKVGALGRILGPRGLMPNPKTGTVTMEVGKAVQEVKSG-----KIDFKVDKFGI 170
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+G++ S +Q+ DN K +L I +KP + ++ I L + SP
Sbjct: 171 IHTSVGKVSFSADQIVDNAKEVLNMILKLKPAA--AKGSYVKSIYLSTTMSP 220
>gi|323492151|ref|ZP_08097312.1| 50S ribosomal protein L1 [Vibrio brasiliensis LMG 20546]
gi|323313602|gb|EGA66705.1| 50S ribosomal protein L1 [Vibrio brasiliensis LMG 20546]
Length = 233
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G +VG D + +++G + F V+ +P D
Sbjct: 67 HGTGREIRVAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S EQ+++NL+ +L + KP S
Sbjct: 174 TIGKANFSAEQIKENLEALLVALKKAKPSS 203
>gi|149195231|ref|ZP_01872321.1| 50S ribosomal protein L1 [Caminibacter mediatlanticus TB-2]
gi|149134664|gb|EDM23150.1| 50S ribosomal protein L1 [Caminibacter mediatlanticus TB-2]
Length = 233
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG +++ +A ++ E A + + G +VG+ + + I+ G + F +I P ++
Sbjct: 67 HGTGKTVKVAVLAKGEKADEAKAAGADIVGEEEVLDMIKEGNLD---FDILIATPDMMGK 123
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
L + +L K +P K+ T+ +D+ K + G + + + K G IG+
Sbjct: 124 LGKFGRILGPKGLMPNPKTGTVTMDIAQAVKNAKAGQVNFRVDKK------GNMHVGIGK 177
Query: 270 LDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLIE 326
+ EQL +N + I+ MKP S +I L SP KLD++ L E
Sbjct: 178 ASFTPEQLLENAIAFVEKINKMKPAS--AKGRYIQNAALSLTMSPS-LKLDVNELAE 231
>gi|28899699|ref|NP_799304.1| 50S ribosomal protein L1 [Vibrio parahaemolyticus RIMD 2210633]
gi|260878167|ref|ZP_05890522.1| ribosomal protein L1 [Vibrio parahaemolyticus AN-5034]
gi|417321671|ref|ZP_12108206.1| 50S ribosomal protein L1 [Vibrio parahaemolyticus 10329]
gi|433659009|ref|YP_007276388.1| LSU ribosomal protein L1p [Vibrio parahaemolyticus BB22OP]
gi|33301558|sp|Q87KQ1.1|RL1_VIBPA RecName: Full=50S ribosomal protein L1
gi|28807951|dbj|BAC61188.1| ribosomal protein L1 [Vibrio parahaemolyticus RIMD 2210633]
gi|308090234|gb|EFO39929.1| ribosomal protein L1 [Vibrio parahaemolyticus AN-5034]
gi|328471080|gb|EGF41986.1| 50S ribosomal protein L1 [Vibrio parahaemolyticus 10329]
gi|432509697|gb|AGB11214.1| LSU ribosomal protein L1p [Vibrio parahaemolyticus BB22OP]
Length = 233
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G +VG D + +++G + F V+ +P D
Sbjct: 67 HGTGRDIRVAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S EQ+++NL+ +L + KP S
Sbjct: 174 TIGKANFSAEQIKENLEALLVALKKAKPSS 203
>gi|340349899|ref|ZP_08672902.1| 50S ribosomal protein L1 [Prevotella nigrescens ATCC 33563]
gi|445113424|ref|ZP_21377547.1| 50S ribosomal protein L1 [Prevotella nigrescens F0103]
gi|339610102|gb|EGQ14963.1| 50S ribosomal protein L1 [Prevotella nigrescens ATCC 33563]
gi|444841079|gb|ELX68098.1| 50S ribosomal protein L1 [Prevotella nigrescens F0103]
Length = 230
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 23/149 (15%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNPK 208
G+ ++ C+ + AA ++ G VG + I+ I G ++TMP+ C K
Sbjct: 70 GKQTRVLCLCTPDQEAAA-KEAGADYVGLDEYIQKINSGWTDVDVIITMPS-----CMGK 123
Query: 209 I--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
+ L ++ RGL+ P KS T+ +D+ K +++G K D + G
Sbjct: 124 VGPLGRVLGPRGLM----PNPKSGTVTMDVAKAVKEVKSG-----KIDFKVDKAGIIHTS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ M+ EQ+ N K ++ + +KP +
Sbjct: 175 IGKISMTAEQILGNAKEFISTVVKLKPAA 203
>gi|300779866|ref|ZP_07089722.1| 50S ribosomal protein L1 [Corynebacterium genitalium ATCC 33030]
gi|300533976|gb|EFK55035.1| 50S ribosomal protein L1 [Corynebacterium genitalium ATCC 33030]
Length = 236
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V + +G +++ +A ++ E A + Q+ G +VG + I+ I G + F
Sbjct: 58 QLVRGTVNLPNGTGKTVRVAVFAEGENATKAQEAGADIVGSDELIEQINAGNID---FDV 114
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQD 259
I P +A + R+ +L R +P K+ T+ D+ + G I + + K
Sbjct: 115 AIATPDQMAKVGRVARVLGPRGLMPNPKTGTVTPDVAKAVSESKGGKIAFRVDK------ 168
Query: 260 FGYSDFH--IGRLDMSQEQLEDNLKRILADISTMKPPS 295
S+ H IG+ + EQL +N +L ++ +KP S
Sbjct: 169 --ASNLHALIGKASFTPEQLAENYGALLDEVLRLKPAS 204
>gi|85712788|ref|ZP_01043832.1| 50S ribosomal protein L1 [Idiomarina baltica OS145]
gi|85693428|gb|EAQ31382.1| 50S ribosomal protein L1 [Idiomarina baltica OS145]
Length = 231
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 71/150 (47%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
+G R + +A + A + ++ G +VG D + +++G + F V+ +P D
Sbjct: 66 NGTGRDVRVAVFTSGANADKAKEAGADIVGMEDLAEQVKKGEMN---FDVVVASP----D 118
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K+ T+ D+ K + G ++Y K+ G
Sbjct: 119 AMRVVGQLGQILGPRGLMPNPKTGTVTPDVATAVKNAKAGQVRYRNDKN------GIIHA 172
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IGR+D ++L++NL+ +LA + KP S
Sbjct: 173 TIGRVDFDNDKLKENLESLLAALKKAKPSS 202
>gi|89898124|ref|YP_515234.1| 50S ribosomal protein L1 [Chlamydophila felis Fe/C-56]
gi|123722319|sp|Q255E9.1|RL1_CHLFF RecName: Full=50S ribosomal protein L1
gi|89331496|dbj|BAE81089.1| 50S ribosomal protein L1 [Chlamydophila felis Fe/C-56]
Length = 232
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ I+ F + E A + D G VG D ++ I+ G V F + P ++ ++
Sbjct: 70 GKTLRILVFAA-GEKAKEALDAGADFVGSDDLVEKIKGGWVD---FDVAVATPDMMREVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
++ +L R +PT K+ T+ D++ L+ G K K D G + +G+L
Sbjct: 126 KLGKVLGPRNLMPTPKAGTVTTDVVKAIAELRKG-KIEFKADRA----GVCNAGVGKLSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
+ L++N++ + + + KPP+
Sbjct: 181 DGQLLKENIEALCSALIKAKPPA 203
>gi|86606434|ref|YP_475197.1| 50S ribosomal protein L1 [Synechococcus sp. JA-3-3Ab]
gi|123506051|sp|Q2JTQ5.1|RL1_SYNJA RecName: Full=50S ribosomal protein L1
gi|86554976|gb|ABC99934.1| ribosomal protein L1 [Synechococcus sp. JA-3-3Ab]
Length = 236
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 61/138 (44%), Gaps = 12/138 (8%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A ++ E + Q+ G VG D I+ I +G++ F +I P ++ + ++ LL
Sbjct: 75 VAVIARGEKVTEAQNAGADRVGFEDLIEEIGKGVID---FDLLIATPDVMPQVAKLGRLL 131
Query: 221 KKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQL 277
R +P+ K T+ +DL K + G ++Y K G G+ E L
Sbjct: 132 GPRGLMPSPKGGTVTMDLAQAIKEFKAGKLEYRADKT------GIVHLIFGKCKFPVEAL 185
Query: 278 EDNLKRILADISTMKPPS 295
+NLK + I +PP
Sbjct: 186 LENLKAVQESIDRNRPPG 203
>gi|343494501|ref|ZP_08732762.1| 50S ribosomal protein L1 [Vibrio nigripulchritudo ATCC 27043]
gi|342825160|gb|EGU59660.1| 50S ribosomal protein L1 [Vibrio nigripulchritudo ATCC 27043]
Length = 234
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G +VG D + +++G + F V+ +P D
Sbjct: 67 HGTGREIRVAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S EQ+++NL+ +L + KP S
Sbjct: 174 TIGKANFSAEQIKENLESLLIALKKAKPSS 203
>gi|357632421|ref|ZP_09130299.1| ribosomal protein L1 [Desulfovibrio sp. FW1012B]
gi|386393010|ref|ZP_10077791.1| ribosomal protein L1 [Desulfovibrio sp. U5L]
gi|357580975|gb|EHJ46308.1| ribosomal protein L1 [Desulfovibrio sp. FW1012B]
gi|385733888|gb|EIG54086.1| ribosomal protein L1 [Desulfovibrio sp. U5L]
Length = 235
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 74/163 (45%), Gaps = 16/163 (9%)
Query: 137 KYMDPWTHIVEVEHSFDHGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGL 194
KY D +V S HG +S+ +AFC + + A+ ++ G G D I+ I+ G
Sbjct: 53 KYSD---QMVRGAVSLPHGLGKSVRVLAFC-KGDKEAEAREAGADYAGGDDLIEKIKGGF 108
Query: 195 VTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMK 252
+ F + P ++A + +I +L R +P K+ T+ D+ + L+ G K K
Sbjct: 109 LD---FDKAVATPDMMATVGKIGKILGPRGLMPNAKTGTVTFDIGKAVQELKAG-KVEFK 164
Query: 253 KDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
D G +G+ E+L DN + ++ + +KP +
Sbjct: 165 VDKA----GVLHVPLGKRSFGPEKLLDNFRAVIDTVMRLKPSA 203
>gi|260913284|ref|ZP_05919766.1| 50S ribosomal protein L1 [Pasteurella dagmatis ATCC 43325]
gi|260632871|gb|EEX51040.1| 50S ribosomal protein L1 [Pasteurella dagmatis ATCC 43325]
Length = 229
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 21/137 (15%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG RS+ +A +Q A ++ G LVG D + +++G + F VI +P D
Sbjct: 67 HGTGRSVRVAVFTQGANAEAAKEAGADLVGMEDLAELVKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G ++Y K+ G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKVGTVTPNVADAVKNAKSGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLK 282
IG+++ S+EQL++NL+
Sbjct: 174 TIGKVNFSEEQLKENLQ 190
>gi|323498406|ref|ZP_08103403.1| 50S ribosomal protein L1 [Vibrio sinaloensis DSM 21326]
gi|323316548|gb|EGA69562.1| 50S ribosomal protein L1 [Vibrio sinaloensis DSM 21326]
Length = 234
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G +VG D + +++G + F V+ +P D
Sbjct: 67 HGTGREIRVAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S EQ+++NL+ +L + KP S
Sbjct: 174 TIGKANFSAEQIKENLEALLVALKKAKPSS 203
>gi|261338350|ref|ZP_05966234.1| ribosomal protein L1 [Bifidobacterium gallicum DSM 20093]
gi|270277024|gb|EFA22878.1| ribosomal protein L1 [Bifidobacterium gallicum DSM 20093]
Length = 231
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 77/163 (47%), Gaps = 15/163 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ ++ F ++ A + + G +VGD + ++ + G + F V+ P ++ +
Sbjct: 70 GKTAKVLVF-ARGPKATEALEAGADIVGDDELVEKVANGFLD---FDAVVATPDMMGKVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L R +P K+ T+ +D+ ++ G + + + K+ G F IG+L
Sbjct: 126 RLGRVLGPRGLMPNPKTGTVTMDVTKAVNDIKGGKVDFRVDKN------GNLSFLIGKLS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+ E LE+N + + ++ KP + ++T+ L S +P
Sbjct: 180 FTPEALEENFRAVADEVRRQKPTT--VKGRYLTKATLTSTMNP 220
>gi|375266964|ref|YP_005024407.1| 50S ribosomal protein L1 [Vibrio sp. EJY3]
gi|369842284|gb|AEX23428.1| 50S ribosomal protein L1 [Vibrio sp. EJY3]
Length = 233
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G +VG D + +++G + F V+ +P D
Sbjct: 67 HGTGREIRVAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S EQ+++NL+ +L + KP S
Sbjct: 174 TIGKANFSAEQIKENLESLLIALKKAKPSS 203
>gi|430748601|ref|YP_007211509.1| 50S ribosomal protein L1 [Thermobacillus composti KWC4]
gi|430732566|gb|AGA56511.1| ribosomal protein L1 [Thermobacillus composti KWC4]
Length = 230
Score = 42.7 bits (99), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 63/122 (51%), Gaps = 20/122 (16%)
Query: 181 VGDSDTIKGIERGLVTMPTFQFVIC--NPKILADLMRIRGLL--KKRIPTLKSQTLGVDL 236
VGDSD I I++G F F +C P ++A++ ++ +L K +P K+ T+ D+
Sbjct: 95 VGDSDLINKIQQGW-----FDFDVCVATPDMMAEVGKLGRILGGKGLMPNPKAGTVTFDV 149
Query: 237 IGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH--IGRLDMSQEQLEDNLKRILADISTMKP 293
+ ++ G I+Y + + Q H IG++ E+LE+NL+ ++ ++ KP
Sbjct: 150 AKAVQEIKAGKIEYRLDRAGQ--------IHAPIGKVSFEAEKLEENLRALIEALNRAKP 201
Query: 294 PS 295
+
Sbjct: 202 AA 203
>gi|261254081|ref|ZP_05946654.1| LSU ribosomal protein L1p (L10Ae) [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|417954974|ref|ZP_12598001.1| 50S ribosomal protein L1 [Vibrio orientalis CIP 102891 = ATCC
33934]
gi|260937472|gb|EEX93461.1| LSU ribosomal protein L1p (L10Ae) [Vibrio orientalis CIP 102891 =
ATCC 33934]
gi|342814188|gb|EGU49137.1| 50S ribosomal protein L1 [Vibrio orientalis CIP 102891 = ATCC
33934]
Length = 233
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G +VG D + +++G + F V+ +P D
Sbjct: 67 HGTGRDIRVAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S EQ+++NL+ +L + KP S
Sbjct: 174 TIGKANFSAEQIKENLEALLVALKKAKPSS 203
>gi|376298167|ref|YP_005169397.1| 50S ribosomal protein L1 [Desulfovibrio desulfuricans ND132]
gi|323460729|gb|EGB16594.1| ribosomal protein L1 [Desulfovibrio desulfuricans ND132]
Length = 235
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D + FC + E + ++ G G D ++ I+ G + F + P ++A +
Sbjct: 70 GKDVRVAVFC-KGEKENEAKEAGADFYGSDDLVEKIQSGWLD---FDKAVATPDMMAVVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
+I +L R +P K+ T+ +D+ L+ G K K D G IG++
Sbjct: 126 KIGRVLGPRGLMPNAKTGTVTMDVAKAVSELKAG-KVEFKVDKA----GVLHAPIGKVSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
++L +NLK +L + MKP S
Sbjct: 181 GPDKLLENLKALLDTVMRMKPSS 203
>gi|311739240|ref|ZP_07713077.1| 50S ribosomal protein L1 [Corynebacterium pseudogenitalium ATCC
33035]
gi|311305666|gb|EFQ81732.1| 50S ribosomal protein L1 [Corynebacterium pseudogenitalium ATCC
33035]
Length = 234
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V S +G + + +A ++ E A Q+ G +VG ++ I+ I G + F
Sbjct: 57 QLVRGTVSLPNGTGKDVRVAVFAEGEKATAAQEAGADIVGTAELIEQINEGNID---FDV 113
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
I P +A + R+ +L R +P K+ T+ D+ ++ G K S + D
Sbjct: 114 AIATPDQMAKVGRVARVLGPRGLMPNPKTGTVTADVAKAISEVKGG-KISFRVDKA---- 168
Query: 261 GYSDFH--IGRLDMSQEQLEDNLKRILADISTMKPPS 295
++ H IG+ E+L +N ++ +I +KP S
Sbjct: 169 --ANLHAIIGKASFDAEKLAENYGALMDEIQRLKPSS 203
>gi|312882837|ref|ZP_07742570.1| 50S ribosomal protein L1 [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369529|gb|EFP97048.1| 50S ribosomal protein L1 [Vibrio caribbenthicus ATCC BAA-2122]
Length = 233
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G +VG D + +++G + F V+ +P D
Sbjct: 67 HGTGRDIRVAVFTQGANAEAAKEAGADVVGMEDLAEQVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S EQ+++NL+ +L + KP S
Sbjct: 174 TIGKANFSAEQIKENLEALLVALKKAKPSS 203
>gi|260897870|ref|ZP_05906366.1| ribosomal protein L1 [Vibrio parahaemolyticus Peru-466]
gi|308085535|gb|EFO35230.1| ribosomal protein L1 [Vibrio parahaemolyticus Peru-466]
Length = 169
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G +VG D + +++G + F V+ +P D
Sbjct: 3 HGTGRDIRVAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGEMN---FDVVVASP----D 55
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 56 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 109
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S EQ+++NL+ +L + KP S
Sbjct: 110 TIGKANFSAEQIKENLEALLVALKKAKPSS 139
>gi|239907755|ref|YP_002954496.1| 50S ribosomal protein L1 [Desulfovibrio magneticus RS-1]
gi|259646155|sp|C4XIP2.1|RL1_DESMR RecName: Full=50S ribosomal protein L1
gi|239797621|dbj|BAH76610.1| 50S ribosomal protein L1 [Desulfovibrio magneticus RS-1]
Length = 235
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 137 KYMDPWTHIVEVEHSFDHGEDRSI--IAFC-SQHETAAQLQDMGVALVGDSDTIKGIERG 193
KY D +V S HG ++I AFC ET A+ + G VG D I+ ++ G
Sbjct: 53 KYSD---QMVRGAVSLPHGLGKTIRVAAFCKGDKETEAR--EAGADFVGGDDLIEKVKNG 107
Query: 194 LVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSM 251
+ F + P ++A + +I +L R +P K+ T+ D+ L+ G K
Sbjct: 108 FLD---FDSAVATPDMMASVGKIGKILGPRGLMPNAKTGTVSFDIGKAVSELKAG-KVEF 163
Query: 252 KKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
K D G +G+ E+L DN + ++ + +KP +
Sbjct: 164 KVDKA----GVLHVPLGKRSFGPEKLLDNFRAVIDAVMRLKPSA 203
>gi|357406685|ref|YP_004918609.1| 50S ribosomal protein L1 [Methylomicrobium alcaliphilum 20Z]
gi|351719350|emb|CCE25026.1| 50S ribosomal subunit protein L1 [Methylomicrobium alcaliphilum
20Z]
Length = 231
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 81/179 (45%), Gaps = 24/179 (13%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
+G +S+ +A +Q A ++ G +VG D +++G + F VI +P D
Sbjct: 67 NGTGKSVRVAVFTQGANADAAKEAGADIVGMDDLADQVKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ D+ K ++G ++Y K G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKVGTVTPDVATAVKNAKSGQVRYRTDKS------GIIHC 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGL 324
IG++D ++ NL+ +LAD+ KP + ++ +I L S P + +D SGL
Sbjct: 174 SIGKVDFDATAIQQNLEALLADLRKAKPSA--AKGVYMKKITLSSTMGPGLW-IDQSGL 229
>gi|387132897|ref|YP_006298869.1| 50S ribosomal protein L1 [Prevotella intermedia 17]
gi|386375745|gb|AFJ09652.1| ribosomal protein L1 [Prevotella intermedia 17]
Length = 230
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 23/149 (15%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNPK 208
G+ ++ C+ + AA ++ G VG + I+ I G ++TMP+ C K
Sbjct: 70 GKQTRVLCLCTPDQEAAA-KEAGADYVGLDEYIQKINGGWTDIDVIITMPS-----CMGK 123
Query: 209 I--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
+ L ++ RGL+ P KS T+ +D+ K +++G K D + G
Sbjct: 124 VGPLGRVLGPRGLM----PNPKSGTVTMDVAKAVKDVKSG-----KIDFKVDKAGIIHTS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ MS EQ+ N K ++ + +KP +
Sbjct: 175 IGKISMSAEQIFGNAKEFISTVVKLKPAA 203
>gi|326793548|ref|YP_004311368.1| 50S ribosomal protein L1 [Marinomonas mediterranea MMB-1]
gi|326544312|gb|ADZ89532.1| ribosomal protein L1 [Marinomonas mediterranea MMB-1]
Length = 231
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 90/214 (42%), Gaps = 31/214 (14%)
Query: 126 EISTTTHQKKVKY-----MDPWT--HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMG 177
E+ST ++ V +DP +V HG + + +A +Q A ++ G
Sbjct: 32 ELSTVKFKESVDVAVNLGVDPRKSDQVVRGSTVLPHGTGKDVRVAVFAQGANAEAAKEAG 91
Query: 178 VALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL------KKRIPTLKSQT 231
+VG D + ++ G + F VI +P D MR+ G L + +P K T
Sbjct: 92 ADIVGFDDLAEQVKAGNLD---FDVVIASP----DAMRVVGQLGQVLGPRGLMPNPKVGT 144
Query: 232 LGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADIST 290
+ D+ K + G +Y K+ G +G +D S + ++ NL+ +L+D+
Sbjct: 145 VTPDVATAVKNAKAGQARYRTDKN------GIVHAGVGSIDFSADAIKGNLEALLSDLRR 198
Query: 291 MKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGL 324
KP S F+ ++ L S P +DL L
Sbjct: 199 AKPAS--SKGIFMKKVTLSSTMGP-GLLIDLGAL 229
>gi|340353373|ref|ZP_08676192.1| 50S ribosomal protein L1 [Prevotella pallens ATCC 700821]
gi|339610330|gb|EGQ15186.1| 50S ribosomal protein L1 [Prevotella pallens ATCC 700821]
Length = 230
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 25/150 (16%)
Query: 155 GEDRSIIAFCS-QHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNP 207
G+ ++ C+ E+AA+ + G VG + I+ I G ++TMP+ C
Sbjct: 70 GKQTRVLCLCTPDQESAAK--EAGADYVGLDEYIQKINAGWTDVDVIITMPS-----CMG 122
Query: 208 KI--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDF 265
K+ L ++ RGL+ P KS T+ +D+ K +++G K D + G
Sbjct: 123 KVGPLGRVLGPRGLM----PNPKSGTVTMDVAKAVKEVKSG-----KIDFKVDKAGIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ MS EQ+ N K ++ + +KP +
Sbjct: 174 SIGKISMSAEQIFGNAKEFISTVVKLKPAA 203
>gi|317509039|ref|ZP_07966670.1| ribosomal protein L1 [Segniliparus rugosus ATCC BAA-974]
gi|316252694|gb|EFV12133.1| ribosomal protein L1 [Segniliparus rugosus ATCC BAA-974]
Length = 235
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 154 HGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG ++ +I F E A Q + G VG + I+ I+ G V F I P +A
Sbjct: 67 HGTGKTARVIVFAV-GEKAVQAEQAGADAVGSDELIERIQGGWVD---FDAAIATPDQMA 122
Query: 212 DLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHI-- 267
+ R+ +L R +P K+ T+ D+ ++ G K + + D +S+ H+
Sbjct: 123 KVGRVARVLGPRGLMPNPKTGTVTADVSKAVADIKGG-KITFRVDK------HSNLHVVV 175
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPS 295
G+ S+EQL +N IL +++ KP +
Sbjct: 176 GKASFSKEQLVENYGAILDEVTRSKPAA 203
>gi|255324704|ref|ZP_05365818.1| ribosomal protein L1 [Corynebacterium tuberculostearicum SK141]
gi|255298179|gb|EET77482.1| ribosomal protein L1 [Corynebacterium tuberculostearicum SK141]
Length = 234
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V S +G + + +A ++ E A Q+ G +VG ++ I+ I G + F
Sbjct: 57 QLVRGTVSLPNGTGKDVRVAVFAEGEKATAAQEAGADIVGTAELIEQINEGNID---FDV 113
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
I P +A + R+ +L R +P K+ T+ D+ ++ G K S + D
Sbjct: 114 AIATPDQMAKVGRVARVLGPRGLMPNPKTGTVTADVAKAIAEVKGG-KISFRVDKA---- 168
Query: 261 GYSDFH--IGRLDMSQEQLEDNLKRILADISTMKPPS 295
++ H IG+ E+L +N ++ +I +KP S
Sbjct: 169 --ANLHAIIGKASFDAEKLAENYGALMDEIQRLKPSS 203
>gi|291303405|ref|YP_003514683.1| 50S ribosomal protein L1 [Stackebrandtia nassauensis DSM 44728]
gi|290572625|gb|ADD45590.1| ribosomal protein L1 [Stackebrandtia nassauensis DSM 44728]
Length = 236
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 151 SFDHGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
S HG +++ I F + E A + G VG + IK ++ G + F I P
Sbjct: 63 SLPHGTGKTVRVIVFAA-GEKADAATEAGADEVGSEELIKRVQDGWLD---FDAAIATPD 118
Query: 209 ILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
+A + RI +L R +P K+ T+ +D+ ++ G K S + D +++ H
Sbjct: 119 QMAKVGRIARILGPRGLMPNPKTGTVTMDVAKAVADIKGG-KISFRIDK------HANLH 171
Query: 267 --IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
IG+ + + EQL DN + ++ +KP + ++ ++ L + P
Sbjct: 172 TVIGKANFTAEQLADNYAAVAEEVQRLKPSA--SKGKYVKKVTLSTTMGP 219
>gi|172087774|ref|YP_205801.2| 50S ribosomal protein L1 [Vibrio fischeri ES114]
gi|160174718|sp|Q5E234.2|RL1_VIBF1 RecName: Full=50S ribosomal protein L1
gi|171902361|gb|AAW86913.2| 50S ribosomal subunit protein L1 [Vibrio fischeri ES114]
Length = 234
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G LVG D + +++G + F V+ +P D
Sbjct: 67 HGTGREIRVAVFTQGANAEAAKEAGADLVGMEDLAELVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++D QL++NL+ +L + KP S
Sbjct: 174 TIGKVDFDAAQLKENLEALLVALKKAKPTS 203
>gi|319950481|ref|ZP_08024394.1| 50S ribosomal protein L1 [Dietzia cinnamea P4]
gi|319435840|gb|EFV91047.1| 50S ribosomal protein L1 [Dietzia cinnamea P4]
Length = 242
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 88/206 (42%), Gaps = 21/206 (10%)
Query: 92 KLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHS 151
+ +++ +ALA +ET M ATVE++ K V + H
Sbjct: 17 RTKLYSPLDALALAKETGSTKMD--------ATVEVAMRLGVDSRKADQMVRGTVNLPHG 68
Query: 152 FDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
G+ +I F + E A + + G +VG D I+ I+ G + F I P +A
Sbjct: 69 --TGKTARVIVFAA-GEKATEAEAAGADVVGSDDLIERIQGGWLD---FDAAIATPDQMA 122
Query: 212 DLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGR 269
+ R+ +L R +P K+ T+ +D+ ++ G K + + D F +G+
Sbjct: 123 KVGRVARVLGPRGLMPNPKTGTVTMDVTKAVGDIKGG-KITFRTDKANN----LHFIVGK 177
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
S EQL +N + + ++ +KP S
Sbjct: 178 ASFSTEQLTENYQAAVDEVMRLKPSS 203
>gi|344345134|ref|ZP_08775990.1| ribosomal protein L1 [Marichromatium purpuratum 984]
gi|343803225|gb|EGV21135.1| ribosomal protein L1 [Marichromatium purpuratum 984]
Length = 230
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 95/237 (40%), Gaps = 31/237 (13%)
Query: 104 AIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKY-----MDPWT--HIVEVEHSFDHGE 156
AIRE P P G E+S + V +DP +V +G
Sbjct: 10 AIRERVEPGKLYAPEEAFGLLKELSQVKFSESVDVAVNLGVDPRKSDQVVRGSTVLPNGT 69
Query: 157 DRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMR 215
+++ +A +Q ++ G VG D + ++ G + F VI +P D MR
Sbjct: 70 GKTVRVAVFTQGANVEAAKEAGADKVGFEDLAEEVKAGNLD---FDVVIASP----DAMR 122
Query: 216 IRGLLKKRI------PTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIG 268
I G L K + P K T+ D+ + + G ++Y K G IG
Sbjct: 123 IVGQLGKVLGPRGLMPNPKVGTVTADVAEAVRNAKAGQVRYRTDK------AGIIHCPIG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLI 325
+ D QL +NL+ +LA++ KP S ++ ++ + + P +D SGLI
Sbjct: 177 KADFEPAQLRENLEALLANLVKAKPASA--KGVYMQQVTVSTTMGP-GLTVDHSGLI 230
>gi|28493680|ref|NP_787841.1| 50S ribosomal protein L1 [Tropheryma whipplei str. Twist]
gi|28572871|ref|NP_789651.1| 50S ribosomal protein L1 [Tropheryma whipplei TW08/27]
gi|54039112|sp|P66100.1|RL1_TROW8 RecName: Full=50S ribosomal protein L1
gi|54041606|sp|P66099.1|RL1_TROWT RecName: Full=50S ribosomal protein L1
gi|28411004|emb|CAD67389.1| 50S ribosomal protein L1 [Tropheryma whipplei TW08/27]
gi|28476722|gb|AAO44810.1| 50S ribosomal protein L1 [Tropheryma whipplei str. Twist]
Length = 227
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 13/144 (9%)
Query: 154 HGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG +++ + F + A L D G + VG SD + + G V F I P+++A
Sbjct: 67 HGTGKAVRVVVFATGPSAQAAL-DSGASEVGGSDLVARVADGYVD---FDVAISTPELMA 122
Query: 212 DLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGR 269
+ ++ +L R +P K+ T+ D +G A + G + K D F IG+
Sbjct: 123 QVGQLGRVLGPRGLMPNPKTGTVTAD-VGKAVKDALGGRIEFKTDKHAN----IHFVIGK 177
Query: 270 LDMSQEQLEDNLKRILADISTMKP 293
S E L +NL L +I+ +P
Sbjct: 178 TSFSVESLSENLSVALDEINRARP 201
>gi|337289973|ref|YP_004628994.1| 50S ribosomal protein L1 [Corynebacterium ulcerans BR-AD22]
gi|384514895|ref|YP_005709987.1| 50S ribosomal protein L1 [Corynebacterium ulcerans 809]
gi|397653152|ref|YP_006493835.1| 50S ribosomal protein L1 [Corynebacterium ulcerans 0102]
gi|334696096|gb|AEG80893.1| 50S ribosomal protein L1 [Corynebacterium ulcerans 809]
gi|334698279|gb|AEG83075.1| 50S ribosomal protein L1 [Corynebacterium ulcerans BR-AD22]
gi|393402108|dbj|BAM26600.1| 50S ribosomal protein L1 [Corynebacterium ulcerans 0102]
Length = 235
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V S +G +++ +A ++ E A + + G +VG ++ I+ I G + F
Sbjct: 57 QLVRGTVSLPNGTGKTVRVAVFAEGEKATEAEAAGADIVGTTELIEQITAGTIN---FDV 113
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQ--TGIKYSMKKDPQEQ 258
I P +A + R+ +L R +P K+ T+ D +AK + G K S + D
Sbjct: 114 AIATPDQMAKVGRVARVLGPRGLMPNPKTGTVTTD---VAKAIADVKGGKISFRVDKA-- 168
Query: 259 DFGYSDFH--IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
++ H IG+ + L +N +L +I+ +KP S ++ ++ L S P
Sbjct: 169 ----ANLHAVIGKASFDAKALAENYGALLDEINRIKPSS--SKGIYVKKVTLASTSGP 220
>gi|224372229|ref|YP_002606601.1| 50S ribosomal protein L1 [Nautilia profundicola AmH]
gi|259646164|sp|B9L7J3.1|RL1_NAUPA RecName: Full=50S ribosomal protein L1
gi|223589020|gb|ACM92756.1| ribosomal protein L1 [Nautilia profundicola AmH]
Length = 233
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG +++ +A ++ A + ++ G +VG+ + ++ I+ G + F +I P ++
Sbjct: 67 HGTGKTVKVAVLAKGAKADEAKEAGADIVGEEEVLEMIQNGNLD---FDILIATPDMMGK 123
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
L R +L K +P K+ T+ +D+ K + G + + + K G IG+
Sbjct: 124 LGRFGKILGPKGLMPNPKTGTVTMDVAQAVKNAKAGQVNFRVDKK------GNMHVGIGK 177
Query: 270 LDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLIE 326
E++ +N + I+ MKP S +I L SP KLD++ L E
Sbjct: 178 ASFDAEKIYENAVAFIEKINKMKPAS--AKGRYIQNAALSLTMSPS-VKLDVNELTE 231
>gi|206890075|ref|YP_002249159.1| 50S ribosomal protein L1 [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206742013|gb|ACI21070.1| ribosomal protein L1 [Thermodesulfovibrio yellowstonii DSM 11347]
Length = 228
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 60/253 (23%), Positives = 107/253 (42%), Gaps = 37/253 (14%)
Query: 78 LTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVK 137
L ++ I LQK+Y F EA+ ++E T ++ TVE+S
Sbjct: 5 LVAVKEKIDLQKEY-----TFDEAIDILKENSF-TKFD-------ETVEMSINLG----- 46
Query: 138 YMDPWT--HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGL 194
+DP +V HG + + + ++ E + ++ G VG D I+ I++G
Sbjct: 47 -IDPRKSDQVVRNTVVLPHGTGKEVRVLVFAKGEKEKEAREAGADYVGAEDLIEKIQQGW 105
Query: 195 VTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSM 251
+ F I P ++ + ++ +L R +P K T+ D+ K + G I+Y
Sbjct: 106 LE---FDRAIATPDMMGQVGKLGKILGPRGLMPNPKLGTVTFDIGKAVKEAKAGKIEYRN 162
Query: 252 KKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSE 311
K G IG+L +E+L +N +L + KPP+ +I ++ + S
Sbjct: 163 DKG------GVVHVPIGKLSFDREKLIENAIAVLKSVIKAKPPT--SKGKYIKKVSISST 214
Query: 312 PSPEKFKLDLSGL 324
P K+D+S L
Sbjct: 215 MGP-GLKIDISKL 226
>gi|312144258|ref|YP_003995704.1| 50S ribosomal protein L1 [Halanaerobium hydrogeniformans]
gi|311904909|gb|ADQ15350.1| ribosomal protein L1 [Halanaerobium hydrogeniformans]
Length = 234
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 70/144 (48%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G++ +++ F ++ E A + +D G VG + + IE G + F + P +++ +
Sbjct: 69 GQEVTLVVF-AKGEKAKEAEDAGADFVGGEELAEKIEGGWLD---FDLAVATPDMMSVVG 124
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L K +P K+ T+ +L + + G I+Y + K G IG+
Sbjct: 125 RLGRILGPKGLMPNPKAGTVTFELEKAVEEFKAGKIEYRVDKT------GIVHIPIGKAS 178
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
S+EQL +N +I+ ++ +P +
Sbjct: 179 FSEEQLLNNYHKIMDTLAKERPAA 202
>gi|449127630|ref|ZP_21763902.1| 50S ribosomal protein L1 [Treponema denticola SP33]
gi|448943775|gb|EMB24660.1| 50S ribosomal protein L1 [Treponema denticola SP33]
Length = 226
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 75/167 (44%), Gaps = 15/167 (8%)
Query: 150 HSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
H F GE + ++ FC+ L D G A G ++ I+ ++ G + F + P +
Sbjct: 63 HQF-RGE-KKVLVFCTDDRVKEAL-DAGAAYAGSTEYIEKVKGGWLD---FDIAVATPDM 116
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHI 267
+ D+ R+ +L +R +P K+ T+ D+ L+ G + + D G I
Sbjct: 117 MKDVGRLGMVLGRRGLMPNPKTGTVTTDIASAINELKKG-RVEFRADKG----GVVHLPI 171
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
G++ M ++ +N++ ++ + TM+ D+I + + S P
Sbjct: 172 GKISMDSSKIVENVQALINE--TMRKKPADAKGDYIRSVSISSTMGP 216
>gi|197334407|ref|YP_002157207.1| 50S ribosomal protein L1 [Vibrio fischeri MJ11]
gi|423687157|ref|ZP_17661965.1| 50S ribosomal protein L1 [Vibrio fischeri SR5]
gi|226730328|sp|B5FC91.1|RL1_VIBFM RecName: Full=50S ribosomal protein L1
gi|197315897|gb|ACH65344.1| ribosomal protein L1 [Vibrio fischeri MJ11]
gi|371493916|gb|EHN69516.1| 50S ribosomal protein L1 [Vibrio fischeri SR5]
Length = 234
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G LVG D + +++G + F V+ +P D
Sbjct: 67 HGTGRDIRVAVFTQGANAEAAKEAGADLVGMEDLAELVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++D QL++NL+ +L + KP S
Sbjct: 174 TIGKVDFDAAQLKENLEALLVALKKAKPTS 203
>gi|209696269|ref|YP_002264199.1| 50S ribosomal protein L1 [Aliivibrio salmonicida LFI1238]
gi|226724862|sp|B6ENR6.1|RL1_ALISL RecName: Full=50S ribosomal protein L1
gi|208010222|emb|CAQ80553.1| 50S ribosomal protein L1 [Aliivibrio salmonicida LFI1238]
Length = 234
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R++ +A +Q A ++ G LVG D + +++G + F V+ +P D
Sbjct: 67 HGTGRNVRVAVFTQGANAEAAKEAGADLVGMEDLAELVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAQAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++D QL++NL+ +L + KP S
Sbjct: 174 TIGKVDFDGAQLKENLESLLVALKKAKPTS 203
>gi|441502653|ref|ZP_20984662.1| LSU ribosomal protein L1p (L10Ae) [Photobacterium sp. AK15]
gi|441429568|gb|ELR67021.1| LSU ribosomal protein L1p (L10Ae) [Photobacterium sp. AK15]
Length = 234
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G +VG D + +++G + F V+ +P D
Sbjct: 67 HGTGREIRVAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++D QL++NL+ +L + KP S
Sbjct: 174 TIGKVDFDAAQLKENLESLLVALKKAKPSS 203
>gi|54310501|ref|YP_131521.1| 50S ribosomal protein L1 [Photobacterium profundum SS9]
gi|61215565|sp|Q6LLV9.1|RL1_PHOPR RecName: Full=50S ribosomal protein L1
gi|46914944|emb|CAG21719.1| putative ribosomal protein L1 [Photobacterium profundum SS9]
Length = 233
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G L+G D +++G++ F VI +P D
Sbjct: 67 HGTGRDIRVAVFTQGANAEAAKEAGADLIGMDDLADQVKKGIMD---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAQAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++D QL++NL+ +L + KP S
Sbjct: 174 TIGKVDFDAAQLKENLESLLVALKKSKPSS 203
>gi|436834479|ref|YP_007319695.1| ribosomal protein L1 [Fibrella aestuarina BUZ 2]
gi|384065892|emb|CCG99102.1| ribosomal protein L1 [Fibrella aestuarina BUZ 2]
Length = 232
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 151 SFDHGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
+ HG +++ + C+ + A+ ++ G VG D I+ IE+G + +I P
Sbjct: 64 TLPHGTGKTVRVLVLCTPDK-EAEAKEAGADYVGLDDYIQKIEQGWTDV---DVIITMPT 119
Query: 209 ILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
++A + R+ +L R +P KS T+ +++ ++ G K D + G
Sbjct: 120 VMAKVGRLGRVLGPRGLMPNPKSGTVTLEVGKAVTEVKAG-----KIDFKVDKTGIIHTS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
IG++ + E++ +N + I+A + +KP S ++ I L S SP
Sbjct: 175 IGKVSFTPEKIAENAQEIIATLLRLKPSS--SKGTYVQTIYLSSTMSP 220
>gi|300857723|ref|YP_003782706.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis FRC41]
gi|375287891|ref|YP_005122432.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis
3/99-5]
gi|379714594|ref|YP_005302931.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis 316]
gi|383313494|ref|YP_005374349.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis
P54B96]
gi|384503913|ref|YP_005680583.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis 1002]
gi|384506003|ref|YP_005682672.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis C231]
gi|384508094|ref|YP_005684762.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis I19]
gi|384510187|ref|YP_005689765.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis PAT10]
gi|385806758|ref|YP_005843155.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis 267]
gi|387135860|ref|YP_005691840.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis
42/02-A]
gi|387137917|ref|YP_005693896.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis CIP
52.97]
gi|387139950|ref|YP_005695928.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis
1/06-A]
gi|389849661|ref|YP_006351896.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis 258]
gi|392399869|ref|YP_006436469.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis Cp162]
gi|300685177|gb|ADK28099.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis FRC41]
gi|302205465|gb|ADL09807.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis C231]
gi|302330018|gb|ADL20212.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis 1002]
gi|308275701|gb|ADO25600.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis I19]
gi|341824126|gb|AEK91647.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis PAT10]
gi|348606305|gb|AEP69578.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis
42/02-A]
gi|349734395|gb|AEQ05873.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis CIP
52.97]
gi|355391741|gb|AER68406.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis
1/06-A]
gi|371575180|gb|AEX38783.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis
3/99-5]
gi|377653300|gb|AFB71649.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis 316]
gi|380868995|gb|AFF21469.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis
P54B96]
gi|383804151|gb|AFH51230.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis 267]
gi|388246967|gb|AFK15958.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis 258]
gi|390530947|gb|AFM06676.1| 50S ribosomal protein L1 [Corynebacterium pseudotuberculosis Cp162]
Length = 236
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 80/178 (44%), Gaps = 21/178 (11%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V S +G +++ +A ++ E A + + G +VG ++ I+ I G + F
Sbjct: 58 QLVRGTVSLPNGTGKTVRVAVFAEGEKATEAEAAGADIVGTTELIEQITAGTIN---FDV 114
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQ--TGIKYSMKKDPQEQ 258
I P +A + R+ +L R +P K+ T+ D +AK + G K S + D
Sbjct: 115 AIATPDQMAKVGRVARVLGPRGLMPNPKTGTVTTD---VAKAIADVKGGKISFRVDKA-- 169
Query: 259 DFGYSDFH--IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
++ H IG+ + L +N +L +I+ +KP S ++ ++ L S P
Sbjct: 170 ----ANLHAVIGKASFDAKALAENYGALLDEINRIKPSS--SKGIYVKKVTLASTSGP 221
>gi|126666823|ref|ZP_01737800.1| ribosomal protein L1 [Marinobacter sp. ELB17]
gi|126628868|gb|EAZ99488.1| ribosomal protein L1 [Marinobacter sp. ELB17]
Length = 232
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V HG +++ +A +Q + ++ G +VG D I++G + F
Sbjct: 58 QVVRSSTVLPHGTGKTVRVAVFTQGANVEKAKEAGADIVGMDDLADEIKKGNMD---FDV 114
Query: 203 VICNPKILADLMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDP 255
VI +P D MR+ G L + +P K T+ D+ K + G ++Y K+
Sbjct: 115 VIASP----DAMRVVGQLGQILGPRGLMPNPKVGTVTPDVATAVKNAKAGQVRYRTDKN- 169
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPE 315
G +G ++ S + +++NL+ ++AD+ KP S ++ +I L S P
Sbjct: 170 -----GIIHSPLGNVEFSAKNIQENLEALIADLKKAKPSS--SKGVYLKKITLSSTMGP- 221
Query: 316 KFKLDLSGL 324
+D S L
Sbjct: 222 GLTIDQSAL 230
>gi|373498603|ref|ZP_09589109.1| 50S ribosomal protein L1 [Fusobacterium sp. 12_1B]
gi|404367984|ref|ZP_10973344.1| 50S ribosomal protein L1 [Fusobacterium ulcerans ATCC 49185]
gi|313689921|gb|EFS26756.1| 50S ribosomal protein L1 [Fusobacterium ulcerans ATCC 49185]
gi|371961214|gb|EHO78855.1| 50S ribosomal protein L1 [Fusobacterium sp. 12_1B]
Length = 235
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 13/146 (8%)
Query: 154 HGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG +++ +A S L+ G G + I I++G + F VI P ++
Sbjct: 68 HGTGKTVKVLAITSGANVEKALE-AGADYAGSDEYIAQIQQGWLD---FDLVIATPDMMP 123
Query: 212 DLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGR 269
L R+ +L K +P KS T+ D+ + G K + + D G IG+
Sbjct: 124 KLGRLGKILGTKGLMPNPKSGTVTPDIASAVSEFKKG-KLAFRVD----KLGSIHVPIGK 178
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
D + E++E+N K L I+ +KP S
Sbjct: 179 ADFAPEKIEENFKAFLDQITRLKPAS 204
>gi|212535234|ref|XP_002147773.1| mitochondrial 54S ribosomal protein MRPL1 [Talaromyces marneffei
ATCC 18224]
gi|210070172|gb|EEA24262.1| mitochondrial large ribosomal subunit protein L1, putative
[Talaromyces marneffei ATCC 18224]
Length = 304
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 64/123 (52%), Gaps = 24/123 (19%)
Query: 175 DMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKIL-----ADLMRI---RGLLKKRIPT 226
+ G ++VGD + + I++G++ F+ IC+ L A L RI RGL+ P+
Sbjct: 149 EAGASIVGDQEIFENIKKGIIE---FERCICHTDSLDALNKAGLGRILGPRGLM----PS 201
Query: 227 LKSQTLGVDLIGI-AKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRIL 285
+K+ T+ VD +GI + L+ G Y +E+D IG+L S EQL DNL+ L
Sbjct: 202 VKTGTV-VDDVGIRVQMLRGGTVY------RERD-AVIRMPIGQLGFSPEQLRDNLRAAL 253
Query: 286 ADI 288
I
Sbjct: 254 EQI 256
>gi|418244662|ref|ZP_12871076.1| 50S ribosomal protein L1 [Corynebacterium glutamicum ATCC 14067]
gi|354511171|gb|EHE84086.1| 50S ribosomal protein L1 [Corynebacterium glutamicum ATCC 14067]
Length = 236
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S +G +++ +A +Q E A + + G VG + ++ I+ G F I P
Sbjct: 64 SLPNGTGKTVRVAVFAQGEKATEAEAAGADFVGTDELVEKIQGGWTD---FDVAIATPDQ 120
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH- 266
+A + RI +L R +P K+ T+ D+ + ++ G K S + D S+ H
Sbjct: 121 MAKIGRIARVLGPRGLMPNPKTGTVTNDVAKAIEEVKGG-KISFRVDKA------SNLHA 173
Query: 267 -IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
IG+ ++L +N +L +I +KP S ++ R+ L S P
Sbjct: 174 AIGKASFDAKKLAENYGALLDEIIRIKPSS--AKGIYVKRVTLSSTTGP 220
>gi|399543644|ref|YP_006556952.1| 50S ribosomal protein L1 [Marinobacter sp. BSs20148]
gi|399158976|gb|AFP29539.1| 50S ribosomal protein L1 [Marinobacter sp. BSs20148]
Length = 232
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V HG +++ +A +Q + ++ G +VG D I++G + F
Sbjct: 58 QVVRSSTVLPHGTGKTVRVAVFTQGANVEKAKEAGADIVGMDDLADEIKKGNMD---FDV 114
Query: 203 VICNPKILADLMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDP 255
VI +P D MR+ G L + +P K T+ D+ K + G ++Y K+
Sbjct: 115 VIASP----DAMRVVGQLGQILGPRGLMPNPKVGTVTPDVATAVKNAKAGQVRYRTDKN- 169
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPE 315
G +G ++ S + +++NL+ ++AD+ KP S ++ +I L S P
Sbjct: 170 -----GIIHSPLGNVEFSAKNIQENLEALIADLKKAKPSS--SKGVYLKKITLSSTMGP- 221
Query: 316 KFKLDLSGL 324
+D S L
Sbjct: 222 GLTIDQSAL 230
>gi|19551720|ref|NP_599722.1| 50S ribosomal protein L1 [Corynebacterium glutamicum ATCC 13032]
gi|62389375|ref|YP_224777.1| 50S ribosomal protein L1 [Corynebacterium glutamicum ATCC 13032]
gi|145294629|ref|YP_001137450.1| 50S ribosomal protein L1 [Corynebacterium glutamicum R]
gi|33301472|sp|Q9LAK5.1|RL1_CORGL RecName: Full=50S ribosomal protein L1
gi|160165853|sp|A4QBF1.1|RL1_CORGB RecName: Full=50S ribosomal protein L1
gi|7108629|gb|AAF36508.1|AF130462_5 50S ribosomal protein L1 [Corynebacterium glutamicum]
gi|14041189|emb|CAC38385.1| L1 protein [Corynebacterium glutamicum]
gi|21323242|dbj|BAB97870.1| Ribosomal protein L1 [Corynebacterium glutamicum ATCC 13032]
gi|41324709|emb|CAF19191.1| 50S RIBOSOMAL PROTEIN L1 [Corynebacterium glutamicum ATCC 13032]
gi|140844549|dbj|BAF53548.1| hypothetical protein [Corynebacterium glutamicum R]
gi|385142642|emb|CCH23681.1| 50S ribosomal protein L1 [Corynebacterium glutamicum K051]
Length = 236
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S +G +++ +A +Q E A + + G VG + ++ I+ G F I P
Sbjct: 64 SLPNGTGKTVRVAVFAQGEKATEAEAAGADFVGTDELVEKIQGGWTD---FDVAIATPDQ 120
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH- 266
+A + RI +L R +P K+ T+ D+ + ++ G K S + D S+ H
Sbjct: 121 MAKIGRIARVLGPRGLMPNPKTGTVTNDVAKAIEEVKGG-KISFRVDKA------SNLHA 173
Query: 267 -IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
IG+ ++L +N +L +I +KP S ++ R+ L S P
Sbjct: 174 AIGKASFDAKKLAENYGALLDEIIRIKPSS--AKGIYVKRVTLSSTTGP 220
>gi|70984962|ref|XP_747987.1| mitochondrial large ribosomal subunit protein L1 [Aspergillus
fumigatus Af293]
gi|66845615|gb|EAL85949.1| mitochondrial large ribosomal subunit protein L1, putative
[Aspergillus fumigatus Af293]
Length = 303
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 35/158 (22%)
Query: 136 VKYMDPWTHIVEVEHSFDHGEDRSIIAFC---SQHETAAQLQDMGVALVGDSDTIKGIER 192
++ M + H V+ E I C ++HE A+ G LVG+ D ++
Sbjct: 116 IRNMLRFPHSVQTESR--------ICVVCPPGTRHEKEARA--AGAVLVGEQDVFDAVKA 165
Query: 193 GLVTMPTFQFVICNPKIL-----ADLMRI---RGLLKKRIPTLKSQTLGVDLIGIAKRLQ 244
G + F +IC+P L A L RI RGL+ P++K+ T+ D+ + L+
Sbjct: 166 GKIE---FDRLICHPDSLDALNKAGLGRILGPRGLM----PSIKTGTVVEDVAARVEMLR 218
Query: 245 TGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLK 282
G Y +E+D IG+L S EQL DNL+
Sbjct: 219 GGTVY------RERD-AVIRLPIGQLAFSPEQLRDNLR 249
>gi|119498839|ref|XP_001266177.1| mitochondrial 54S ribosomal protein MRPL1 [Neosartorya fischeri
NRRL 181]
gi|119414341|gb|EAW24280.1| mitochondrial large ribosomal subunit protein L1, putative
[Neosartorya fischeri NRRL 181]
Length = 276
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 35/158 (22%)
Query: 136 VKYMDPWTHIVEVEHSFDHGEDRSIIAFC---SQHETAAQLQDMGVALVGDSDTIKGIER 192
++ M + H V+ E I C ++HE A+ G LVG+ D ++
Sbjct: 89 IRNMLRFPHSVQTESR--------ICVVCPPGTRHEKEARA--AGAVLVGEQDVFDAVKA 138
Query: 193 GLVTMPTFQFVICNPKIL-----ADLMRI---RGLLKKRIPTLKSQTLGVDLIGIAKRLQ 244
G + F +IC+P L A L RI RGL+ P++K+ T+ D+ + L+
Sbjct: 139 GKIE---FDRLICHPDSLDALNKAGLGRILGPRGLM----PSIKTGTVVEDVAARVEMLR 191
Query: 245 TGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLK 282
G Y +E+D IG+L S EQL DNL+
Sbjct: 192 GGTVY------RERD-AVIRLPIGQLAFSPEQLRDNLR 222
>gi|402846578|ref|ZP_10894890.1| ribosomal protein L1 [Porphyromonas sp. oral taxon 279 str. F0450]
gi|402267979|gb|EJU17369.1| ribosomal protein L1 [Porphyromonas sp. oral taxon 279 str. F0450]
Length = 231
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 98/233 (42%), Gaps = 32/233 (13%)
Query: 94 RIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFD 153
+I+ +EA A ++E T ++ A+V++ K +V + H
Sbjct: 19 KIYSLREASALVKEITD-TKFD-------ASVDVDVRLGVDPRKANQMVRGVVTLPHG-- 68
Query: 154 HGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNP 207
G+ ++A C+ + A + Q G VG + I+ I G ++TMP I
Sbjct: 69 TGKQVRVLALCTPDKEA-EAQAAGADYVGLDEYIEKIRGGWTDIDVIITMPAIMGKIGA- 126
Query: 208 KILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHI 267
L ++ RGL+ P KS T+ D+ K +++G K D + G I
Sbjct: 127 --LGRVLGPRGLM----PNPKSGTVTNDIAAAVKEVKSG-----KIDFKVDKTGIVHTSI 175
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
G++ S +Q+ DN I+ + +KP + ++ I L S SP K+D
Sbjct: 176 GKVSFSADQIYDNANEIITTLLRLKPSA--AKGTYVKSIYLSSTMSPS-IKID 225
>gi|302344366|ref|YP_003808895.1| 50S ribosomal protein L1 [Desulfarculus baarsii DSM 2075]
gi|301640979|gb|ADK86301.1| ribosomal protein L1 [Desulfarculus baarsii DSM 2075]
Length = 236
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 73/146 (50%), Gaps = 13/146 (8%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG +++ +A ++ E A + +D G VG D ++ I+ G + F + P ++A
Sbjct: 67 HGTGKTVRVAVFAKGEKAQEARDAGADEVGAEDLLEKIQGGWLE---FDRCVATPDMMAV 123
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
+ ++ +L R +P K+ T+ DL K ++ G I++ ++K G IG+
Sbjct: 124 VGKLGRVLGPRGLMPNTKTGTVTFDLAKAVKEIKAGKIEFRVEKG------GIIHAPIGK 177
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
E+L++N++ +L + +KP +
Sbjct: 178 ASFGVEKLKENMEALLETLIRLKPTA 203
>gi|298372783|ref|ZP_06982773.1| ribosomal protein L1 [Bacteroidetes oral taxon 274 str. F0058]
gi|298275687|gb|EFI17238.1| ribosomal protein L1 [Bacteroidetes oral taxon 274 str. F0058]
Length = 231
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 78/172 (45%), Gaps = 23/172 (13%)
Query: 151 SFDHGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQF 202
S HG + I +A C+ + A+ ++ G VG + I+ I+ G ++TMP
Sbjct: 64 SLPHGTGKQIRVLALCTP-DKEAEAKEAGADYVGLDEYIEKIKGGWTDIDVIITMPAIMG 122
Query: 203 VICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
I L ++ RGL+ P KS T+ +++ ++ G K D + +G
Sbjct: 123 KIGA---LGRVLGPRGLM----PNPKSGTVTMEVGKAVAEVKQG-----KIDFKVDKYGI 170
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
IG++ S++++ DN + +A I +KP S ++ + L S SP
Sbjct: 171 VHTSIGKVSFSEDKIADNAREFMATIMKLKPTS--AKGTYVKSVYLSSTMSP 220
>gi|402820921|ref|ZP_10870482.1| 50S ribosomal protein L1 [alpha proteobacterium IMCC14465]
gi|402510252|gb|EJW20520.1| 50S ribosomal protein L1 [alpha proteobacterium IMCC14465]
Length = 231
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
+G RS+ +A ++ A + ++ G +VG D ++ ++ G + F I P ++
Sbjct: 66 NGSGRSVRVAVFAKDAKADEAREAGADVVGAEDLMETVQGGTID---FDRCIATPDMMPL 122
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
+ R+ +L R +P K T+ D+ K + G +++ ++K G +G+
Sbjct: 123 VGRLGKVLGPRNLMPNPKVGTVTTDVAEAVKAAKGGAVEFRVEK------AGIVHAGVGK 176
Query: 270 LDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLS 322
S+EQ+ N++ L+ + +P FI RI L S P K+D++
Sbjct: 177 ASFSEEQIAGNVQAFLSAVQKARPTGA--KGTFIQRIALSSTMGP-GVKIDVA 226
>gi|340359349|ref|ZP_08681835.1| 50S ribosomal protein L1 [Actinomyces sp. oral taxon 448 str.
F0400]
gi|339884670|gb|EGQ74438.1| 50S ribosomal protein L1 [Actinomyces sp. oral taxon 448 str.
F0400]
Length = 229
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 15/157 (9%)
Query: 144 HIVEVEHSFDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
+V S HG ++ ++ F +Q E A Q G VG D I + G F
Sbjct: 57 QMVRGTVSLPHGTGKTARVVVF-AQGERAEQALAAGADEVGSDDLIAKVAGGYTD---FD 112
Query: 202 FVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQ 258
+ P ++ + R+ +L R +P ++ T+ +D+ ++ G I++ + +
Sbjct: 113 AAVATPDLMGKVGRLGRVLGPRGLMPNPRTGTVTMDVTKAVTDIKGGRIEFRVDRAAN-- 170
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+F IG++ +++QLE+NL+ L ++ +KP S
Sbjct: 171 ----LNFVIGKVSFTEDQLEENLRVALDEVLRLKPSS 203
>gi|414562402|ref|YP_005617593.1| 50S ribosomal protein L1 [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311086938|gb|ADP67018.1| 50S ribosomal protein L1 [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
Length = 231
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 15/146 (10%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNP---KI 209
+G RSI +A +Q + A +D G L+G D + I++ V F VI P KI
Sbjct: 67 NGIGRSIRVAVFTQGDNIAIAKDAGAELIGMEDLSEKIKKEGVD---FDVVIATPDAMKI 123
Query: 210 LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIG 268
+ L +I G + +P K T+ ++ K +TG ++Y K+ G IG
Sbjct: 124 VTQLGQILGP-RNLMPNTKLGTITTNIAEAIKNAKTGQVRYRNDKN------GIIHATIG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPP 294
R++ + ++++NL L I KPP
Sbjct: 177 RINFHKNEIKENLNVFLESIKKAKPP 202
>gi|159126089|gb|EDP51205.1| mitochondrial large ribosomal subunit protein L1, putative
[Aspergillus fumigatus A1163]
Length = 303
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 35/158 (22%)
Query: 136 VKYMDPWTHIVEVEHSFDHGEDRSIIAFC---SQHETAAQLQDMGVALVGDSDTIKGIER 192
++ M + H V+ E I C ++HE A+ G LVG+ D ++
Sbjct: 116 IRNMLRFPHSVQTESR--------ICVVCPPGTRHEKEARA--AGAVLVGEQDVFDAVKA 165
Query: 193 GLVTMPTFQFVICNPKIL-----ADLMRI---RGLLKKRIPTLKSQTLGVDLIGIAKRLQ 244
G + F +IC+P L A L RI RGL+ P++K+ T+ D+ + L+
Sbjct: 166 GKIE---FDRLICHPDSLDALNKAGLGRILGPRGLM----PSIKTGTVVEDVAARVEMLR 218
Query: 245 TGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLK 282
G Y +E+D IG+L S EQL DNL+
Sbjct: 219 GGTVY------RERD-AVIRLPIGQLAFSPEQLRDNLR 249
>gi|430761849|ref|YP_007217706.1| LSU ribosomal protein L1p (L10Ae) [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430011473|gb|AGA34225.1| LSU ribosomal protein L1p (L10Ae) [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 231
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 97/239 (40%), Gaps = 42/239 (17%)
Query: 97 QFQEALAAIRETHHPT-------MYNLPRAFIGA----TVEISTTTHQKKVKYMDPWT-- 143
+ + + AIRE P ++L R F G ++++S +DP
Sbjct: 3 KLSKRMKAIREKLRPGQAYPVGEAFDLLREFSGVKFRESIDVSVNLG------VDPRKSD 56
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V +G +S+ +A +Q A ++ G +VG D + + G + F
Sbjct: 57 QVVRGSTVLPNGTGKSVRVAVFTQGANADAAREAGADIVGMDDLAEQVRAGELN---FDV 113
Query: 203 VICNPKILADLMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDP 255
VI +P D MR+ G L + +P K T+ D+ K ++G ++Y K
Sbjct: 114 VIASP----DAMRVVGQLGQILGPRGLMPNPKVGTVTPDVATAVKNAKSGQVRYRTDKG- 168
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
G IG +D L +NL +LAD+ +KP + ++ R+ + S P
Sbjct: 169 -----GIIHCSIGAVDFDSHALTENLNALLADLMKLKPST--AKGVYVRRVTVSSTMGP 220
>gi|2267574|gb|AAB63584.1| ribosomal protein L1 [Haemophilus ducreyi]
Length = 253
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 73/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG RS +A +Q A + G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGRSARVAVFTQGANAEAAKAAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ +++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTLNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++D S+ QL++NL+ +LA ++ KP +
Sbjct: 174 TIGKVDFSEVQLKENLQALLAALNKAKPTT 203
>gi|219681423|ref|YP_002467808.1| 50S ribosomal protein L1 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|219681979|ref|YP_002468363.1| 50S ribosomal protein L1 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|257471098|ref|ZP_05635097.1| 50S ribosomal protein L1 [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|384225853|ref|YP_005617016.1| 50S ribosomal protein L1 [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|384226427|ref|YP_005618178.1| 50S ribosomal protein L1 [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
gi|254799834|sp|B8D8J9.1|RL1_BUCA5 RecName: Full=50S ribosomal protein L1
gi|254799835|sp|B8D6V3.1|RL1_BUCAT RecName: Full=50S ribosomal protein L1
gi|219621712|gb|ACL29868.1| 50S ribosomal protein L1 [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|219624266|gb|ACL30421.1| 50S ribosomal protein L1 [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|311086360|gb|ADP66441.1| 50S ribosomal protein L1 [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087524|gb|ADP67603.1| 50S ribosomal protein L1 [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 231
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 15/146 (10%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNP---KI 209
+G RSI +A +Q + A +D G L+G D + I++ V F VI P KI
Sbjct: 67 NGIGRSIRVAVFTQGDNIAIAKDAGAELIGMEDLSEKIKKEGVD---FDVVIATPDAMKI 123
Query: 210 LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIG 268
+ L +I G + +P K T+ ++ K +TG ++Y K+ G IG
Sbjct: 124 VTQLGQILGP-RNLMPNTKLGTITTNIAEAIKNAKTGQVRYRNDKN------GIIHATIG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPP 294
R++ + ++++NL L I KPP
Sbjct: 177 RINFHKNEIKENLNVFLESIKKAKPP 202
>gi|392549524|ref|ZP_10296661.1| 50S ribosomal protein L1 [Pseudoalteromonas rubra ATCC 29570]
Length = 234
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A ++ G LVG D + +++G + F V+ +P D
Sbjct: 67 HGTGREVRVAVFTQGANADAAKEAGADLVGMEDLAEQVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K+ T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKTGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKP 293
IG++D QL++NL+ ++ + KP
Sbjct: 174 TIGKVDFDANQLQENLEALIVALKKAKP 201
>gi|389843615|ref|YP_006345695.1| 50S ribosomal protein L1 [Mesotoga prima MesG1.Ag.4.2]
gi|387858361|gb|AFK06452.1| ribosomal protein L1 [Mesotoga prima MesG1.Ag.4.2]
Length = 232
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 68/156 (43%), Gaps = 13/156 (8%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D ++ F ++ E A + G VG D ++ I+ G F I P ++ D+
Sbjct: 70 GKDVRVLVF-ARGEQAETAKRCGADFVGSDDLVQQIQGGWTD---FDVAIATPDMMRDIG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
++ +L R +P+ K+ T+ D+ K + G + +K D G IG+
Sbjct: 126 KLGKVLGPRGLMPSPKAGTVTADVEDAVKGFKAG-RLEVKNDKT----GNLHLPIGKKSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPSKPEDEDFITRILL 308
+E+L +N L I MKP F+ R+ L
Sbjct: 181 DKEKLRENFVSALNQIMKMKPAG--SKGRFVQRVFL 214
>gi|15616666|ref|NP_239878.1| 50S ribosomal protein L1 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|11134305|sp|P57149.1|RL1_BUCAI RecName: Full=50S ribosomal protein L1
gi|25294915|pir||D84934 50S ribosomal protein L1 [imported] - Buchnera sp. (strain APS)
gi|10038729|dbj|BAB12764.1| 50S ribosomal protein L1 [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
Length = 231
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 15/146 (10%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNP---KI 209
+G RSI +A +Q + A +D G L+G D + I++ V F VI P KI
Sbjct: 67 NGIGRSIRVAVFTQGDNIAIAKDAGAELIGMEDLSEKIKKEGVD---FDVVIATPDAMKI 123
Query: 210 LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIG 268
+ L +I G + +P K T+ ++ K +TG ++Y K+ G IG
Sbjct: 124 VTQLGQILGP-RNLMPNTKLGTITTNIAEAIKNAKTGQVRYRNDKN------GIIHATIG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPP 294
R++ + ++++NL L I KPP
Sbjct: 177 RINFHKNEIKENLNVFLESIKKAKPP 202
>gi|395240949|ref|ZP_10417971.1| 50S ribosomal protein L1 [Lactobacillus gigeriorum CRBIP 24.85]
gi|394475457|emb|CCI87948.1| 50S ribosomal protein L1 [Lactobacillus gigeriorum CRBIP 24.85]
Length = 230
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 99/222 (44%), Gaps = 38/222 (17%)
Query: 86 YLQKDYKL---RIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPW 142
YL+ K+ +++ EA+ ++ET + A A+VE+S +DP
Sbjct: 8 YLEAAKKVDSTKLYSVDEAMKLVKETSY--------ANFDASVEVSYNLS------VDPK 53
Query: 143 THIVEVEHSF----DHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMP 198
++ S G+ + +I F + A Q + G VG + ++ ++ G +
Sbjct: 54 QADQQIRGSLVLPNGTGKSQKVIVFA-EGPQAEQAKAAGADEVGSDELVEKVQNGYLD-- 110
Query: 199 TFQFVICNPKILADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDP 255
F V+ P ++A + R+ +L K +P K+ T+ +D+ K ++ G ++Y + +
Sbjct: 111 -FDVVVATPMMMAKVGRLGRVLGPKGLMPNPKTGTVTMDVEKAVKNVKAGQVEYRVDRQ- 168
Query: 256 QEQDFGYSDFH--IGRLDMSQEQLEDNLKRILADISTMKPPS 295
+ H IG++ ++EQL +N K + I +P +
Sbjct: 169 -------ASIHAAIGKVSFTEEQLAENFKALRDVIVRARPAA 203
>gi|357419287|ref|YP_004932279.1| 50S ribosomal protein L1 [Thermovirga lienii DSM 17291]
gi|355396753|gb|AER66182.1| ribosomal protein L1 [Thermovirga lienii DSM 17291]
Length = 235
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 62/138 (44%), Gaps = 12/138 (8%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+ + E + Q+ VG D ++ IE G + F+ VI P ++ + R+ +L
Sbjct: 75 VVVIASGEKIKEAQEADADFVGGDDIVQKIEGGWLD---FEAVIATPDMMKSVGRLGRIL 131
Query: 221 KKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQL 277
R +P+ K+ T+ DL K ++ G +++ + K FG G+ +E+L
Sbjct: 132 GPRGMMPSAKTGTVTFDLATAVKEIKAGKVEFRVDK------FGIVHNAFGKASFDEEKL 185
Query: 278 EDNLKRILADISTMKPPS 295
+N K + I KP +
Sbjct: 186 YENAKALFGAILKAKPAA 203
>gi|340756401|ref|ZP_08693014.1| 50S ribosomal protein L1 [Fusobacterium sp. D12]
gi|373112708|ref|ZP_09526936.1| 50S ribosomal protein L1 [Fusobacterium necrophorum subsp.
funduliforme 1_1_36S]
gi|419840773|ref|ZP_14364160.1| ribosomal protein L1 [Fusobacterium necrophorum subsp. funduliforme
ATCC 51357]
gi|421501351|ref|ZP_15948316.1| ribosomal protein L1 [Fusobacterium necrophorum subsp. funduliforme
Fnf 1007]
gi|313685883|gb|EFS22718.1| 50S ribosomal protein L1 [Fusobacterium sp. D12]
gi|371655001|gb|EHO20358.1| 50S ribosomal protein L1 [Fusobacterium necrophorum subsp.
funduliforme 1_1_36S]
gi|386907309|gb|EIJ72023.1| ribosomal protein L1 [Fusobacterium necrophorum subsp. funduliforme
ATCC 51357]
gi|402266027|gb|EJU15478.1| ribosomal protein L1 [Fusobacterium necrophorum subsp. funduliforme
Fnf 1007]
Length = 235
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG +++ I + E + D G G + I I++G + F VI P ++
Sbjct: 68 HGTGKTVKILAITSGENVQKALDAGADYAGAEEYISQIQQGWLD---FDLVIATPDMMPK 124
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ R+ +L K +P KS T+ D+ + G K + + D G IG+
Sbjct: 125 IGRLGKILGTKGLMPNPKSGTVTPDIAAAVSEFKKG-KLAFRVD----KVGSIHVAIGKA 179
Query: 271 DMSQEQLEDNLKRILADISTMKPPS 295
D + E++E+N K + I +KP +
Sbjct: 180 DFAVEKIEENFKAFMDQIVRLKPAA 204
>gi|384226909|ref|YP_005618659.1| 50S ribosomal protein L1 [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311085785|gb|ADP65867.1| 50S ribosomal protein L1 [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
Length = 231
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 15/146 (10%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNP---KI 209
+G RSI +A +Q + A +D G L+G D + I++ V F VI P KI
Sbjct: 67 NGIGRSIRVAVFTQGDNIAIAKDAGAELIGMEDLSEKIKKEGVD---FDVVIATPDAMKI 123
Query: 210 LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIG 268
+ L +I G + +P K T+ ++ K +TG ++Y K+ G IG
Sbjct: 124 VTQLGQILGP-RNLMPNTKLGTITTNIAEAIKNAKTGQVRYRNDKN------GIIHATIG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPP 294
R++ + ++++NL L I KPP
Sbjct: 177 RINFHKNEIKENLNVFLESIKKAKPP 202
>gi|384228070|ref|YP_005619805.1| 50S ribosomal protein L1 [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
gi|345539003|gb|AEO07870.1| 50S ribosomal protein L1 [Buchnera aphidicola str. Ua (Uroleucon
ambrosiae)]
Length = 231
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 65/146 (44%), Gaps = 15/146 (10%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNP---KI 209
+G RS+ IA +Q E Q +GV VG D I+ V F VI +P KI
Sbjct: 67 NGLGRSVRIAVFTQGENIEVAQKLGVEFVGMQDLADKIKTEGVH---FNTVIASPDAMKI 123
Query: 210 LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIG 268
+ L I G + +P LK T+ ++ + +TG +KY K+ G IG
Sbjct: 124 VTQLGHILGP-RNLMPNLKLGTVTTNIAQAIQNAKTGQVKYRNDKN------GIIHATIG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPP 294
R+ S+ +++N L I KPP
Sbjct: 177 RVSFSETHIKENFNTFLESIKKSKPP 202
>gi|335427941|ref|ZP_08554861.1| 50S ribosomal protein L1 [Haloplasma contractile SSD-17B]
gi|334893867|gb|EGM32076.1| 50S ribosomal protein L1 [Haloplasma contractile SSD-17B]
Length = 230
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 46/210 (21%), Positives = 94/210 (44%), Gaps = 29/210 (13%)
Query: 92 KLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHS 151
K +++Q +EA+ +++T A ATVE++ +DP + +
Sbjct: 17 KTKLYQVEEAIELVKKTSV--------AKFDATVEVAFRLG------VDPRKADQNIRGA 62
Query: 152 --FDHGEDRS-IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
HG ++ + ++ E A + + G VGD++ I+ I+ G F ++ P
Sbjct: 63 MVLPHGTGKTRTVLVIAKGEKAKEAEQAGADYVGDAEYIEKIQDGWFG---FDVIVATPD 119
Query: 209 ILADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
++ L R+ +L K +P K+ T+ +D+ + ++ G ++Y + K G
Sbjct: 120 MMPQLGRLGRILGPKGLMPNPKTGTVTMDVTKAVEEIKAGKVEYRVDK------AGNVHV 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ +L +NL+ I + +KP S
Sbjct: 174 PIGKISFDSVKLLENLRAITETMVRLKPAS 203
>gi|410463729|ref|ZP_11317226.1| ribosomal protein L1 [Desulfovibrio magneticus str. Maddingley
MBC34]
gi|409983156|gb|EKO39548.1| ribosomal protein L1 [Desulfovibrio magneticus str. Maddingley
MBC34]
Length = 235
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 18/164 (10%)
Query: 137 KYMDPWTHIVEVEHSFDHGEDRSI--IAFC-SQHETAAQLQDMGVALVGDSDTIKGIERG 193
KY D +V S HG ++I AFC ET A+ + G VG D I+ ++ G
Sbjct: 53 KYSD---QMVRGAVSLPHGLGKTIRVAAFCKGDKETEAR--EAGADFVGGDDLIEKVKGG 107
Query: 194 LVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSM 251
+ F + P ++A + +I +L R +P K+ T+ D+ L+ G K
Sbjct: 108 FLD---FDSAVATPDMMASVGKIGKILGPRGLMPNAKTGTVSFDIGKAVSELKAG-KVEF 163
Query: 252 KKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
K D G +G+ E+L DN + ++ + +KP +
Sbjct: 164 KVDKA----GVLHVPLGKRSFGPEKLLDNFRAVIDAVMRLKPSA 203
>gi|15643221|ref|NP_228265.1| 50S ribosomal protein L1 [Thermotoga maritima MSB8]
gi|403252192|ref|ZP_10918502.1| 50S ribosomal protein L1 [Thermotoga sp. EMP]
gi|418045371|ref|ZP_12683467.1| ribosomal protein L1 [Thermotoga maritima MSB8]
gi|132757|sp|P29393.1|RL1_THEMA RecName: Full=50S ribosomal protein L1
gi|4980961|gb|AAD35538.1|AE001723_8 ribosomal protein L1 [Thermotoga maritima MSB8]
gi|48185|emb|CAA77860.1| ribosomal protein L1 [Thermotoga maritima MSB8]
gi|351678453|gb|EHA61600.1| ribosomal protein L1 [Thermotoga maritima MSB8]
gi|402812205|gb|EJX26684.1| 50S ribosomal protein L1 [Thermotoga sp. EMP]
Length = 233
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 90/204 (44%), Gaps = 28/204 (13%)
Query: 133 QKKVKYMDPWTHI---VEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKG 189
Q + Y P HI + + H G++ ++ F ++ E A + + G VG D ++
Sbjct: 47 QTGIDYRKPEQHIRGTIVLPHG--TGKEVKVLVF-AKGEKAKEALEAGADYVGAEDLVEK 103
Query: 190 IER-GLVTMPTFQFVICNPKILADLMRIRGLLKK------RIPTLKSQTLGVDLIGIAKR 242
IE+ G + F I P D+MRI G L K +P+ KS T+ ++ K
Sbjct: 104 IEKEGFLD---FDVAIATP----DMMRIIGRLGKILGPRGLMPSPKSGTVTQEVAEAVKE 156
Query: 243 LQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDF 302
+ G + ++ D G +G+ E+L++N+ + I MKP F
Sbjct: 157 FKKG-RIEVRTDKT----GNIHIPVGKRSFDNEKLKENIIAAIKQIMQMKPAG--VKGQF 209
Query: 303 ITRILLWSEPSPEKFKLDLSGLIE 326
I +++L S P KL+L L++
Sbjct: 210 IKKVVLASTMGP-GIKLNLQSLLK 232
>gi|153209795|ref|ZP_01947512.1| ribosomal protein L1 [Coxiella burnetii 'MSU Goat Q177']
gi|154705817|ref|YP_001425193.1| 50S ribosomal protein L1 [Coxiella burnetii Dugway 5J108-111]
gi|165918648|ref|ZP_02218734.1| ribosomal protein L1 [Coxiella burnetii Q321]
gi|212213261|ref|YP_002304197.1| 50S ribosomal protein L1 [Coxiella burnetii CbuG_Q212]
gi|212218061|ref|YP_002304848.1| 50S ribosomal protein L1 [Coxiella burnetii CbuK_Q154]
gi|189041811|sp|A9KD42.1|RL1_COXBN RecName: Full=50S ribosomal protein L1
gi|226724894|sp|B6J5B9.1|RL1_COXB1 RecName: Full=50S ribosomal protein L1
gi|226724895|sp|B6J274.1|RL1_COXB2 RecName: Full=50S ribosomal protein L1
gi|120575246|gb|EAX31870.1| ribosomal protein L1 [Coxiella burnetii 'MSU Goat Q177']
gi|154355103|gb|ABS76565.1| LSU ribosomal protein L1P [Coxiella burnetii Dugway 5J108-111]
gi|165917676|gb|EDR36280.1| ribosomal protein L1 [Coxiella burnetii Q321]
gi|212011671|gb|ACJ19052.1| LSU ribosomal protein L1P [Coxiella burnetii CbuG_Q212]
gi|212012323|gb|ACJ19703.1| LSU ribosomal protein L1P [Coxiella burnetii CbuK_Q154]
Length = 232
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R++ +A +Q + + + G +VG D + I+ G + F VI P+ +
Sbjct: 68 HGSGRTVKVAVFAQGDNVEKAKAAGADIVGLDDLAERIQGGDID---FDVVIATPETMRV 124
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
+ ++ +L R +P K T+ D+ K + G ++Y K+ G IG+
Sbjct: 125 VGKLGQVLGPRGLMPNPKVGTVTTDVASAVKNAKQGQVRYRTDKN------GIIHCTIGK 178
Query: 270 LDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
++ ++ LE+N +L DI KP + ++ ++ L S P
Sbjct: 179 VNFEEKALEENFLALLNDIKKAKPSA--AKGTYLKKLTLSSTMGP 221
>gi|148243456|ref|YP_001228613.1| 50S ribosomal protein L1 [Synechococcus sp. RCC307]
gi|160174528|sp|A5GWK1.1|RL1_SYNR3 RecName: Full=50S ribosomal protein L1
gi|147851766|emb|CAK29260.1| 50S ribosomal protein L1 [Synechococcus sp. RCC307]
Length = 235
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 11/142 (7%)
Query: 155 GEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADL 213
G RSI IA ++ E A+ + G LVGD + + I G + F +I P ++ +
Sbjct: 67 GTGRSIRIAVITRGEKVAEAKAAGAELVGDEELVDSIAGGQMD---FDLLIATPDMMPKV 123
Query: 214 MRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L R +P K+ T+ D+ + G K + D G G+
Sbjct: 124 AKLGRVLGPRGLMPNPKTGTVTTDVTNAINEFKAG-KLEFRADRS----GIVHVQFGKAS 178
Query: 272 MSQEQLEDNLKRILADISTMKP 293
S + L +NLK + + KP
Sbjct: 179 FSADDLLENLKSVQETVDRNKP 200
>gi|392543110|ref|ZP_10290247.1| 50S ribosomal protein L1 [Pseudoalteromonas piscicida JCM 20779]
gi|409203739|ref|ZP_11231942.1| 50S ribosomal protein L1 [Pseudoalteromonas flavipulchra JG1]
Length = 234
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A ++ G LVG D + +++G + F V+ +P D
Sbjct: 67 HGTGRDVRVAVFTQGANAEAAKEAGADLVGMEDLAEQVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K+ T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKTGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++D QL++NL+ ++ + KP +
Sbjct: 174 TIGKVDFDANQLQENLEALIIALKKAKPST 203
>gi|359298557|ref|ZP_09184396.1| 50S ribosomal protein L1 [Haemophilus [parainfluenzae] CCUG 13788]
gi|402305963|ref|ZP_10825017.1| ribosomal protein L1 [Haemophilus sputorum HK 2154]
gi|400375585|gb|EJP28481.1| ribosomal protein L1 [Haemophilus sputorum HK 2154]
Length = 229
Score = 42.0 bits (97), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 21/148 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R+ +A +Q A + G LVG D + +++G + F VI +P D
Sbjct: 67 HGTGRTARVAVFTQGANAEAAKAAGADLVGMEDLAEAVKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKP 293
IG+ D S EQL++NL+ +LA ++ KP
Sbjct: 174 TIGKADFSPEQLKENLQALLAALTKAKP 201
>gi|74316413|ref|YP_314153.1| 50S ribosomal protein L1 [Thiobacillus denitrificans ATCC 25259]
gi|91207385|sp|Q3SLQ9.1|RL1_THIDA RecName: Full=50S ribosomal protein L1
gi|74055908|gb|AAZ96348.1| Ribosomal protein L1 [Thiobacillus denitrificans ATCC 25259]
Length = 231
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 20/142 (14%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A +Q + A + +D G +VG D I+ G + F VI P D MR+ G L
Sbjct: 75 VAVFAQGDNAQKARDAGADIVGFDDLAADIKAGKMD---FDVVIATP----DAMRVVGQL 127
Query: 221 ------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+ +P K T+ D++G K + G ++Y K G IGR S
Sbjct: 128 GQILGPRGLMPNPKVGTVSPDVVGAVKNAKAGQVQYRTDKG------GIVHCTIGRASFS 181
Query: 274 QEQLEDNLKRILADISTMKPPS 295
+ L++NL +L + KP S
Sbjct: 182 VDDLKENLVALLDALQRAKPAS 203
>gi|29653579|ref|NP_819271.1| 50S ribosomal protein L1 [Coxiella burnetii RSA 493]
gi|161829975|ref|YP_001596172.1| 50S ribosomal protein L1 [Coxiella burnetii RSA 331]
gi|33301435|sp|Q83ET3.1|RL1_COXBU RecName: Full=50S ribosomal protein L1
gi|189041812|sp|A9NAL1.1|RL1_COXBR RecName: Full=50S ribosomal protein L1
gi|29540841|gb|AAO89785.1| LSU ribosomal protein L1P [Coxiella burnetii RSA 493]
gi|161761842|gb|ABX77484.1| ribosomal protein L1 [Coxiella burnetii RSA 331]
Length = 232
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 75/165 (45%), Gaps = 15/165 (9%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R++ +A +Q + + + G +VG D + I+ G + F VI P+ +
Sbjct: 68 HGSGRTVKVAVFAQGDNVEKAKAAGADIVGLDDLAERIQGGDID---FDVVIATPETMRV 124
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
+ ++ +L R +P K T+ D+ K + G ++Y K+ G IG+
Sbjct: 125 VGKLGQVLGPRGLMPNPKVGTVTTDVASAVKNAKQGQVRYRTDKN------GIIHCTIGK 178
Query: 270 LDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
++ ++ LE+N +L DI KP + ++ ++ L S P
Sbjct: 179 VNFEEKALEENFLALLNDIKKAKPSA--AKGTYLKKLTLSSTMGP 221
>gi|90407968|ref|ZP_01216141.1| 50S ribosomal protein L1 [Psychromonas sp. CNPT3]
gi|90310906|gb|EAS39018.1| 50S ribosomal protein L1 [Psychromonas sp. CNPT3]
Length = 234
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 78/179 (43%), Gaps = 24/179 (13%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q + + G +VG D I+ G + F VI +P D
Sbjct: 67 HGTGREVRVAVFTQGANVEKAKAAGADIVGMEDLAAQIKAGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ D+ K ++G ++Y K+ G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKVGTVTPDVATAVKNAKSGQVRYRNDKN------GIIHS 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGL 324
IG++D + EQ+++NL+ +L I KP F+ +I L S K+D + L
Sbjct: 174 TIGKVDFTAEQIKENLEALLIAIKKAKPSG--AKGQFLKKIAL-STTMGAGIKIDQASL 229
>gi|339478104|ref|YP_004706924.1| 50S ribosomal protein L1 [Candidatus Moranella endobia PCIT]
gi|338172655|gb|AEI75056.1| 50S ribosomal protein L1 [Candidatus Moranella endobia PCIT]
Length = 234
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A SQ A + G LVG D I+ G + F VI P++++
Sbjct: 67 HGSGRRVRVAVFSQGTNAEVAKTAGADLVGMDDLANQIKIGDIN---FDVVIAAPEVMSF 123
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
+ ++ +L R +P K T+ ++ K+ + G I+Y K+ G IG+
Sbjct: 124 VSQLGHILGPRGLMPNPKFGTVTPNIAEAVKKAKAGQIRYRNDKN------GIIHTTIGK 177
Query: 270 LDMSQEQLEDNLKRILADISTMKP 293
+D E+L++NL+ +L + KP
Sbjct: 178 VDFESEKLQENLEYLLMALKKAKP 201
>gi|330444938|ref|ZP_08308592.1| ribosomal protein L1 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328493056|dbj|GAA03089.1| ribosomal protein L1 [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 234
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
+G R I +A +Q A ++ G LVG D + +++G + F VI +P D
Sbjct: 67 NGTGRDIRVAVFTQGANAEAAKEAGADLVGMEDLAEQVKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++D QL++NL+ +L + KP S
Sbjct: 174 TIGKVDFEAAQLQENLEALLVALKKAKPSS 203
>gi|310644217|ref|YP_003948976.1| 50S ribosomal protein L1 [Paenibacillus polymyxa SC2]
gi|375310819|ref|ZP_09776084.1| 50S ribosomal protein l1 [Paenibacillus sp. Aloe-11]
gi|390456392|ref|ZP_10241920.1| 50S ribosomal protein L1 [Paenibacillus peoriae KCTC 3763]
gi|309249168|gb|ADO58735.1| 50S ribosomal protein L1 [Paenibacillus polymyxa SC2]
gi|375077187|gb|EHS55430.1| 50S ribosomal protein l1 [Paenibacillus sp. Aloe-11]
gi|392304910|emb|CCI71273.1| 50S ribosomal protein L1 [Paenibacillus polymyxa M1]
Length = 230
Score = 41.6 bits (96), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 21/148 (14%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVIC--NPKILAD 212
G+ + ++ F ++ + + + G VGD D I I++G F+F +C P ++++
Sbjct: 70 GKTQRVLVF-AKGDKVKEAEAAGADFVGDQDMINKIQQGW-----FEFDVCVATPDMMSE 123
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH--I 267
+ ++ LL + +P K+ T+ D+ + ++ G I+Y + K Q H I
Sbjct: 124 VGKLGRLLGGKGLMPNPKAGTVTFDVAKAVQEIKAGKIEYRLDKAGQ--------IHAPI 175
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPS 295
G+ S EQL +NLK ++ ++ KP +
Sbjct: 176 GKASFSAEQLNENLKALIEALNRAKPAA 203
>gi|417969692|ref|ZP_12610628.1| 50S ribosomal protein L1 [Corynebacterium glutamicum S9114]
gi|344045796|gb|EGV41465.1| 50S ribosomal protein L1 [Corynebacterium glutamicum S9114]
Length = 236
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 76/169 (44%), Gaps = 17/169 (10%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S +G +++ +A +Q E A + + G VG + ++ I+ G F I P
Sbjct: 64 SLPNGTGKTVRVAVFAQGEKATEAEAAGADFVGTDELVEKIQGGWTD---FDVAIATPDQ 120
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH- 266
+A + RI +L R +P K+ T+ D+ + ++ G K S + D S+ H
Sbjct: 121 MAKIGRIARVLGPRGLMPNPKTGTVTNDVAKAIEEVKGG-KISFRVDKA------SNLHA 173
Query: 267 -IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
IG+ ++L +N +L ++ +KP S ++ R+ L S P
Sbjct: 174 AIGKASFDAKKLAENYGALLDEVIRIKPSS--AKGIYVKRVTLSSTTGP 220
>gi|430741505|ref|YP_007200634.1| 50S ribosomal protein L1 [Singulisphaera acidiphila DSM 18658]
gi|430013225|gb|AGA24939.1| ribosomal protein L1 [Singulisphaera acidiphila DSM 18658]
Length = 225
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 76/177 (42%), Gaps = 19/177 (10%)
Query: 124 TVEISTTTHQKKVKYMDPWTHIVEVEHS--FDHGEDRSI-IAFCSQHETAAQLQDMGVAL 180
TVE+ST +DP V S HG +++ +A +Q + A + G +
Sbjct: 40 TVEVSTNLG------IDPRQSDQNVRGSVALPHGIGKNVRVAVFAQGDNAEKATAAGADI 93
Query: 181 VGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIG 238
VG D I+ G + F + P ++ + + LL R +P+ +S T+ D+
Sbjct: 94 VGGDDLAAKIKGGFLD---FDVALATPDMMGVVGPLGRLLGPRGLMPSPRSGTVATDISS 150
Query: 239 IAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+ + G K + D G +G+L+ + QL +N+ L + T+KP +
Sbjct: 151 AVREFKAG-KIEFRNDKG----GNVAAPVGKLNFTDAQLLENITAFLKHLQTVKPAA 202
>gi|29840452|ref|NP_829558.1| 50S ribosomal protein L1 [Chlamydophila caviae GPIC]
gi|33301430|sp|Q822I8.1|RL1_CHLCV RecName: Full=50S ribosomal protein L1
gi|29834801|gb|AAP05436.1| ribosomal protein L1 [Chlamydophila caviae GPIC]
Length = 232
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 68/143 (47%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ I+ F + E A + D G VG D ++ I+ G V F + P ++ ++
Sbjct: 70 GKTLKILVFAA-GEKAKEALDAGADFVGSDDLVERIKGGWVD---FDVAVATPDMMREVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
++ +L R +PT K+ T+ +D+ L+ G K K D G + +G+L
Sbjct: 126 KLGKVLGPRNLMPTPKAGTVTMDVTKAIAELRKG-KIEFKADRA----GVCNAGVGKLSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
+ L++N++ + + + KPP+
Sbjct: 181 DRNLLKENIEALCSALIKAKPPA 203
>gi|419583795|ref|ZP_14119960.1| 50S ribosomal protein L1 [Campylobacter coli 1961]
gi|380562001|gb|EIA84898.1| 50S ribosomal protein L1 [Campylobacter coli 1961]
Length = 233
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 112 TMYNLPRAFIGATVEISTTTHQKKVKYMDP--WTHIVEVEHSFDHGEDRSI-IAFCSQHE 168
T+ NL A TVEI+ + +DP +V G + + A ++
Sbjct: 29 TVRNLKSAKFDETVEIALKLN------VDPRHADQMVRGSVVLPAGTGKKVRAAVIAKDA 82
Query: 169 TAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL--KKRIPT 226
A + ++ G +VG D I+ I++G + F +I P ++ + ++ +L K +P
Sbjct: 83 KADEAKNAGADIVGSDDLIEEIQKGNMN---FDVLIATPNLMGLVGKVGRILGPKGLMPN 139
Query: 227 LKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILA 286
K+ T+ +D+ ++G + + + D Q G +G++ S+EQL DN+ +
Sbjct: 140 PKTGTVTMDVAQAVNNAKSG-QVNFRVDKQ----GNIHAGLGKVSFSKEQLWDNISTFIK 194
Query: 287 DISTMKPPS 295
I+ KP +
Sbjct: 195 AINKHKPAA 203
>gi|87300790|ref|ZP_01083632.1| 50S ribosomal protein L1 [Synechococcus sp. WH 5701]
gi|87284661|gb|EAQ76613.1| 50S ribosomal protein L1 [Synechococcus sp. WH 5701]
Length = 235
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 10/135 (7%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
IA ++ E A+ + G L GD + ++ I G + F +I P ++ + ++ +L
Sbjct: 74 IAVIARGEKVAEAKAAGADLAGDDELVEAIAGGQID---FDLLIATPDMMPKVAKLGRVL 130
Query: 221 KKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLE 278
R +P K+ T+ DL G + G K + D G G+ S + L
Sbjct: 131 GPRGLMPNPKAGTVATDLAGAINEFKAG-KLEFRADRT----GIVHVRFGKASFSLDDLL 185
Query: 279 DNLKRILADISTMKP 293
+NLK + I KP
Sbjct: 186 ENLKALQETIDRQKP 200
>gi|333909717|ref|YP_004483303.1| 50S ribosomal protein L1 [Marinomonas posidonica IVIA-Po-181]
gi|333479723|gb|AEF56384.1| ribosomal protein L1 [Marinomonas posidonica IVIA-Po-181]
Length = 233
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 51/214 (23%), Positives = 91/214 (42%), Gaps = 31/214 (14%)
Query: 126 EISTTTHQKKVKY-----MDPWT--HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMG 177
E+ST ++ V +DP +V HG + + +A +Q A ++ G
Sbjct: 32 ELSTVKFKESVDVSINLGVDPRKSDQVVRGSTVLPHGAGKDVRVAVFAQGANAEAAKEAG 91
Query: 178 VALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL------KKRIPTLKSQT 231
+VG D + ++ G + F VI +P D MRI G L + +P K T
Sbjct: 92 ADVVGFEDLAEQVKAGNLD---FDVVIASP----DAMRIVGQLGQVLGPRGLMPNPKVGT 144
Query: 232 LGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADIST 290
+ D+ K + G +Y K+ G +G ++ + + ++ NL+ +LAD+
Sbjct: 145 VTPDVATAVKNAKAGQARYRTDKN------GIIHTGVGSIEFAADAIKGNLEALLADLRR 198
Query: 291 MKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGL 324
KP S ++ ++ L S P ++DL L
Sbjct: 199 AKPAS--AKGVYLKKVTLSSTMGP-GLQIDLGAL 229
>gi|419642319|ref|ZP_14174123.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni ATCC
33560]
gi|380625089|gb|EIB43697.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni ATCC
33560]
Length = 233
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A ++ A + ++ G +VG D ++ I++G + F +I P ++ + ++ +L
Sbjct: 75 VAVIAKDAKADEAKNAGADIVGSDDLVEEIQKGNMN---FDVLIATPNLMGLVGKVGRIL 131
Query: 221 --KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLE 278
K +P K+ T+ +D+ ++G + + + D Q G +G++ S+EQL
Sbjct: 132 GPKGLMPNPKTGTVTMDVAQAVNNAKSG-QVNFRVDKQ----GNIHAGLGKVSFSKEQLW 186
Query: 279 DNLKRILADISTMKPPS 295
DN+ + I+ KP +
Sbjct: 187 DNVSTFIKAINKHKPAA 203
>gi|332305047|ref|YP_004432898.1| 50S ribosomal protein L1 [Glaciecola sp. 4H-3-7+YE-5]
gi|410642686|ref|ZP_11353195.1| large subunit ribosomal protein L1 [Glaciecola chathamensis S18K6]
gi|410645960|ref|ZP_11356414.1| large subunit ribosomal protein L1 [Glaciecola agarilytica NO2]
gi|332172376|gb|AEE21630.1| ribosomal protein L1 [Glaciecola sp. 4H-3-7+YE-5]
gi|410134299|dbj|GAC04813.1| large subunit ribosomal protein L1 [Glaciecola agarilytica NO2]
gi|410137569|dbj|GAC11382.1| large subunit ribosomal protein L1 [Glaciecola chathamensis S18K6]
Length = 233
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 20/142 (14%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A +Q A ++ G +VG D + +++G + F V+ +P D MR+ G+L
Sbjct: 75 VAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGEMN---FDVVVASP----DAMRVVGML 127
Query: 221 ------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+ +P K+ T+ D+ K + G ++Y K+ G IG++
Sbjct: 128 GQILGPRGLMPNPKTGTVTPDVATAVKNAKAGQVRYRNDKN------GIIHASIGKIAFE 181
Query: 274 QEQLEDNLKRILADISTMKPPS 295
Q+E+NL ++ + KP S
Sbjct: 182 SNQIEENLAALIEAVKKAKPSS 203
>gi|374320659|ref|YP_005073788.1| 50S ribosomal protein L1 [Paenibacillus terrae HPL-003]
gi|357199668|gb|AET57565.1| 50S ribosomal protein l1 [Paenibacillus terrae HPL-003]
Length = 230
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 21/148 (14%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVIC--NPKILAD 212
G+ + ++ F ++ + + + G VGD D I I++G F+F +C P ++++
Sbjct: 70 GKTQRVLVF-AKGDKVKEAEAAGADFVGDQDMINKIQQGW-----FEFDVCVATPDMMSE 123
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH--I 267
+ ++ LL + +P K+ T+ D+ + ++ G I+Y + K Q H I
Sbjct: 124 VGKLGRLLGGKGLMPNPKAGTVTFDVAKAVQEIKAGKIEYRLDKAGQ--------IHAPI 175
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPS 295
G+ S EQL +NLK ++ ++ KP +
Sbjct: 176 GKASFSAEQLNENLKALIEALNRAKPAA 203
>gi|148925854|ref|ZP_01809541.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145844840|gb|EDK21944.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
CG8486]
Length = 233
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A ++ A + ++ G +VG D ++ I++G + F +I P ++ + ++ +L
Sbjct: 75 VAVIAKDAKADEAKNAGADIVGSDDLVEEIQKGNMN---FDVLIATPNLMGLVGKVGRIL 131
Query: 221 --KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLE 278
K +P K+ T+ +D+ ++G + + + D Q G +G++ S+EQL
Sbjct: 132 GPKGLMPNPKTGTVTMDVAQAVNNAKSG-QVNFRVDKQ----GNIHAGLGKVSFSKEQLW 186
Query: 279 DNLKRILADISTMKPPS 295
DN+ + I+ KP +
Sbjct: 187 DNVSTFIKAINKHKPAA 203
>gi|406909097|gb|EKD49426.1| hypothetical protein ACD_63C00148G0008 [uncultured bacterium]
Length = 250
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ + + FC+ HE + ++ G +VG + +K I++ F + P ++ L
Sbjct: 93 GKTKRVAVFCT-HEKEKEAKEAGADIVGGENLVKEIKQN--GKLDFDVAVAEPAMMKFLG 149
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
RI +L R +P K++T+ D+ G K L++G K D + D G +G+L
Sbjct: 150 RIAPILGPRGLMPNPKTETVTSDIGGTVKALKSG-----KVDFRMDDGGNIHQLVGKLSF 204
Query: 273 SQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
++L +N++ + + +K DF+ ++++ S P
Sbjct: 205 DADKLVENIETFIDAVKKVK--PAKVKGDFLGKVVVTSTMGP 244
>gi|335356887|ref|ZP_08548757.1| 50S ribosomal protein L1 [Lactobacillus animalis KCTC 3501]
Length = 230
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G++++++ F ++ A + +D G +VGD D + I+ G + F I P ++A +
Sbjct: 71 GKEQTVVVF-AKGPKAQEAKDAGADVVGDDDLVARIQDGWL---DFDVAIATPDMMAQVG 126
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L K +P K+ T+ +D+ ++G + Y +D G +G++
Sbjct: 127 RLGRVLGPKGLMPNPKTGTVTMDVAKAVSDAKSGQVTYRTDRD------GNVHVPVGKVS 180
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
+ L N + I I+ ++P +
Sbjct: 181 FDEAALVGNFQAIYDTIAKLRPAA 204
>gi|118411001|ref|YP_874396.1| 50S ribosomal protein L1 [Phaeodactylum tricornutum]
gi|125987546|sp|A0T0C1.1|RK1_PHATC RecName: Full=50S ribosomal protein L1, chloroplastic
gi|116739748|gb|ABK20619.1| 50S ribosomal protein L1 [Phaeodactylum tricornutum]
Length = 230
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 61/136 (44%), Gaps = 10/136 (7%)
Query: 160 IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGL 219
+IA + E + + G +VG+ + I I +G + F +I P ++ L ++ +
Sbjct: 74 VIAVLTNEENFEEAKSSGGDIVGNDELIAQITQGQIN---FDLLIATPNMMPKLAKLGRM 130
Query: 220 L--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQL 277
L K +P+ KS T+ L + G K+ K D G + G+ + + EQL
Sbjct: 131 LGPKGLMPSPKSGTVTSTLQSTLTEFKKG-KFEYKADKT----GIVHVNFGKSNFTNEQL 185
Query: 278 EDNLKRILADISTMKP 293
+NLK + I +P
Sbjct: 186 VENLKALYQSIEQNRP 201
>gi|283954234|ref|ZP_06371758.1| ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 414]
gi|283794252|gb|EFC32997.1| ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 414]
Length = 233
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A ++ A + ++ G +VG D ++ I++G + F +I P ++ + ++ +L
Sbjct: 75 VAVIAKDAKADEAKNAGADIVGSDDLVEEIQKGNMN---FDVLIATPNLMGLVGKVGRIL 131
Query: 221 --KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLE 278
K +P K+ T+ +D+ ++G + + + D Q G +G++ S+EQL
Sbjct: 132 GPKGLMPNPKTGTVTMDVAQAVNNAKSG-QVNFRVDKQ----GNIHAGLGKVSFSKEQLW 186
Query: 279 DNLKRILADISTMKPPS 295
DN+ + I+ KP +
Sbjct: 187 DNISAFVKAINKHKPAA 203
>gi|308070988|ref|YP_003872593.1| 50S ribosomal protein L1 [Paenibacillus polymyxa E681]
gi|305860267|gb|ADM72055.1| 50S ribosomal protein L1 [Paenibacillus polymyxa E681]
Length = 230
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 74/148 (50%), Gaps = 21/148 (14%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVIC--NPKILAD 212
G+ + ++ F ++ + + + G VGD D I I++G F+F +C P ++++
Sbjct: 70 GKTQRVLVF-AKGDKVKEAEAAGADFVGDQDMINKIQQGW-----FEFDVCVATPDMMSE 123
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH--I 267
+ ++ LL + +P K+ T+ D+ + ++ G I+Y + K Q H I
Sbjct: 124 VGKLGRLLGGKGLMPNPKAGTVTFDVAKAVQEIKAGKIEYRLDKAGQ--------IHAPI 175
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPS 295
G+ S EQL +NLK ++ ++ KP +
Sbjct: 176 GKASFSAEQLNENLKALVEALNRAKPAA 203
>gi|358450644|ref|ZP_09161098.1| 50S ribosomal protein L1 [Marinobacter manganoxydans MnI7-9]
gi|385330111|ref|YP_005884062.1| 50S ribosomal protein L1 [Marinobacter adhaerens HP15]
gi|311693261|gb|ADP96134.1| 50S ribosomal protein L1 [Marinobacter adhaerens HP15]
gi|357225121|gb|EHJ03632.1| 50S ribosomal protein L1 [Marinobacter manganoxydans MnI7-9]
Length = 232
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V HG +++ +A +Q A + G +VG D +++G + F
Sbjct: 58 QVVRSSTVLPHGTGKTVRVAVFTQGANAEKATAAGADVVGMDDLADEVKKGNMD---FDV 114
Query: 203 VICNPKILADLMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDP 255
VI P D MR+ G L + +P K T+ D+ K + G ++Y K+
Sbjct: 115 VIATP----DAMRVVGQLGQILGPRGLMPNPKVGTVTPDVETAVKNAKAGQVRYRTDKN- 169
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPE 315
G +G ++ S + +++NL+ ++AD+ KP S ++ +I + S P
Sbjct: 170 -----GIIHAPLGNVEFSAQNIKENLEALVADLKKAKPSS--AKGVYLKKITISSTMGP- 221
Query: 316 KFKLDLSGL 324
+D SGL
Sbjct: 222 GLTIDQSGL 230
>gi|406025231|ref|YP_006705532.1| 50S ribosomal protein L1 [Cardinium endosymbiont cEper1 of Encarsia
pergandiella]
gi|404432830|emb|CCM10112.1| 50S ribosomal protein L1 [Cardinium endosymbiont cEper1 of Encarsia
pergandiella]
Length = 230
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Query: 151 SFDHGEDR--SIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
S HG + I+ C+ + + + G VG D I+ I G + +I P
Sbjct: 62 SLPHGTGKPCRILVLCTA-DKEQEARQAGADYVGLDDFIEKIAAGWTDI---DLIITMPT 117
Query: 209 ILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
++ L R+ +L R +P K T+ +D+ + K ++ G K S K D +G
Sbjct: 118 VMVKLGRLGKILGPRGLMPNPKVGTVTMDVAKMVKEVKGG-KLSFKVD----KYGIVHSS 172
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
+GR+ QE++ +N+ +L I +KP S
Sbjct: 173 VGRVSFPQEKVVENVMELLKAIVKLKPAS 201
>gi|404442962|ref|ZP_11008136.1| 50S ribosomal protein L1 [Mycobacterium vaccae ATCC 25954]
gi|403656127|gb|EJZ10947.1| 50S ribosomal protein L1 [Mycobacterium vaccae ATCC 25954]
Length = 235
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 78/178 (43%), Gaps = 19/178 (10%)
Query: 123 ATVEISTTTHQKKVKYMDP--WTHIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVA 179
ATVE++ +DP +V + HG ++ +A + + A Q Q G
Sbjct: 40 ATVEVAIRLG------VDPRKADQMVRGTVNLPHGTGKTARVAVFAVGDKAEQAQAAGAD 93
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLI 237
+VG D I+ I+ G++ F I P +A + RI +L R +P K+ T+ D+
Sbjct: 94 IVGSDDLIEQIQGGMLD---FDAAIATPDQMAKVGRIARILGPRGLMPNPKTGTVTPDVA 150
Query: 238 GIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
++ G K + + D Q F IG+ +++L +N L ++ KP S
Sbjct: 151 KAVADIKGG-KINFRVDKQAN----LHFVIGKASFDEQKLAENYGAALDEVLRAKPSS 203
>gi|227487146|ref|ZP_03917462.1| ribosomal protein L1 [Corynebacterium glucuronolyticum ATCC 51867]
gi|227541687|ref|ZP_03971736.1| ribosomal protein L1 [Corynebacterium glucuronolyticum ATCC 51866]
gi|227092804|gb|EEI28116.1| ribosomal protein L1 [Corynebacterium glucuronolyticum ATCC 51867]
gi|227182502|gb|EEI63474.1| ribosomal protein L1 [Corynebacterium glucuronolyticum ATCC 51866]
Length = 235
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G++ ++ F + A ++ G VG ++ I+ I+ G F I P +A +
Sbjct: 70 GKEVRVVVFA-EGTNATAAEEAGADFVGTAELIEKIQGGWTD---FDAAIATPDQMAKVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH--IGRL 270
R+ +L R +P K+ T+ D+ K ++ G K S + D S+ H IG+
Sbjct: 126 RVARVLGPRGLMPNPKTGTVTPDVAKAVKEIKGG-KISFRVDKA------SNLHALIGKA 178
Query: 271 DMSQEQLEDNLKRILADISTMKPPS 295
E+L +N +L +I+ +KP S
Sbjct: 179 SFDAEKLAENYGALLDEINRLKPSS 203
>gi|339448583|ref|ZP_08652139.1| 50S ribosomal protein L1 [Lactobacillus fructivorans KCTC 3543]
Length = 230
Score = 41.6 bits (96), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D++++ F + E A +D G VGD D + I+ G + F I P ++A +
Sbjct: 71 GKDQTVVVFA-KGEKAQDAKDAGADYVGDDDLAQKIQDGWL---DFDVAIATPDMMAQVG 126
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L K +P K+ T+ +D+ + G + Y +D G IG+
Sbjct: 127 RLGRVLGPKGLMPNPKTGTVTMDVSKAVSDAKAGKVTYRTDRD------GNVAVAIGKDS 180
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
++L +NL I I +P S
Sbjct: 181 FDADKLAENLNTINDVIVKNRPAS 204
>gi|256848156|ref|ZP_05553600.1| ribosomal protein L1 [Lactobacillus coleohominis 101-4-CHN]
gi|256715216|gb|EEU30193.1| ribosomal protein L1 [Lactobacillus coleohominis 101-4-CHN]
Length = 230
Score = 41.6 bits (96), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 67/144 (46%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D+++I F ++ + A +D G VGD D ++ I+ G + F I P ++ +
Sbjct: 71 GKDQTVIVF-AKGDNAQAAKDAGADFVGDQDLVEKIQDGWL---DFDVAIATPDMMPQVG 126
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L K +P K+ T+ +D+ + + G + Y +D G G+
Sbjct: 127 RLGRVLGPKGLMPNPKTGTVTMDVAKAVEESKAGKVTYRTDRD------GNVAVPFGKAS 180
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
++L +NLK I + +P S
Sbjct: 181 FDTDKLVENLKTIEDVVVKARPAS 204
>gi|419627788|ref|ZP_14160681.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
23263]
gi|419674906|ref|ZP_14204187.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
110-21]
gi|380606245|gb|EIB26166.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
23263]
gi|380652467|gb|EIB68948.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
110-21]
Length = 233
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A ++ A + ++ G +VG D ++ I++G + F +I P ++ + ++ +L
Sbjct: 75 VAVIAKDAKADEAKNAGADIVGSDDLVEEIQKGNMN---FDVLIATPNLMGLVGKVGRIL 131
Query: 221 --KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLE 278
K +P K+ T+ +D+ ++G + + + D Q G +G++ S+EQL
Sbjct: 132 GPKGLMPNPKTGTVTMDVAQAVNNAKSG-QVNFRVDKQ----GNIHAGLGKVSFSKEQLW 186
Query: 279 DNLKRILADISTMKPPS 295
DN+ + I+ KP +
Sbjct: 187 DNVSTFVKAINKHKPAT 203
>gi|297180663|gb|ADI16872.1| ribosomal protein l1 [uncultured gamma proteobacterium
HF0010_16J05]
Length = 231
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 70/160 (43%), Gaps = 21/160 (13%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V + HG +S+ +A +Q + A + G LVG D + ++ G + F
Sbjct: 57 QVVRGATTLPHGTGKSVRVAVFAQGDNADKATAAGADLVGFEDLGEQVKGGSMD---FDV 113
Query: 203 VICNPKILADLMRIRGLLKKRI------PTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDP 255
VI P D MRI G L K + P K+ T+ D+ K + G +++ K
Sbjct: 114 VIATP----DAMRIVGQLGKVLGPRGLMPNPKTGTVTADVETAVKNAKAGQVQFRTDK-- 167
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
G IG++ Q+++NL+ ++ D+ KP S
Sbjct: 168 ----AGIVHGSIGQVGFETGQIKENLEALVGDLKKAKPAS 203
>gi|57237529|ref|YP_178543.1| 50S ribosomal protein L1 [Campylobacter jejuni RM1221]
gi|86149135|ref|ZP_01067367.1| ribosomal protein L1 [Campylobacter jejuni subsp. jejuni CF93-6]
gi|86151639|ref|ZP_01069853.1| ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 260.94]
gi|86153609|ref|ZP_01071812.1| ribosomal protein L1 [Campylobacter jejuni subsp. jejuni HB93-13]
gi|88596843|ref|ZP_01100079.1| ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 84-25]
gi|121612670|ref|YP_001000182.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
81-176]
gi|153952002|ref|YP_001398488.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. doylei
269.97]
gi|157414768|ref|YP_001482024.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 81116]
gi|167005140|ref|ZP_02270898.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
81-176]
gi|205355348|ref|ZP_03222119.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
CG8421]
gi|218562130|ref|YP_002343909.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni NCTC
11168 = ATCC 700819]
gi|283955897|ref|ZP_06373387.1| ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 1336]
gi|315124019|ref|YP_004066023.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|317510746|ref|ZP_07968136.1| ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 305]
gi|384441124|ref|YP_005657427.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni M1]
gi|384442808|ref|YP_005659060.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni S3]
gi|384447759|ref|YP_005655810.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
IA3902]
gi|403055253|ref|YP_006632658.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
gi|407941919|ref|YP_006857559.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni PT14]
gi|415730195|ref|ZP_11472889.1| ribosomal protein L1 [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|415747572|ref|ZP_11476103.1| ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 327]
gi|419617620|ref|ZP_14151191.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
129-258]
gi|419619406|ref|ZP_14152874.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 51494]
gi|419622473|ref|ZP_14155704.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
23216]
gi|419623148|ref|ZP_14156280.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
23218]
gi|419626254|ref|ZP_14159248.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
23223]
gi|419629621|ref|ZP_14162341.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 60004]
gi|419631259|ref|ZP_14163853.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
23264]
gi|419632793|ref|ZP_14165246.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
23269]
gi|419634855|ref|ZP_14167179.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 55037]
gi|419636958|ref|ZP_14169142.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
9879]
gi|419639217|ref|ZP_14171252.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 86605]
gi|419640684|ref|ZP_14172608.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
23357]
gi|419645994|ref|ZP_14177472.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 53161]
gi|419648220|ref|ZP_14179566.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
9217]
gi|419649441|ref|ZP_14180680.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
2008-1025]
gi|419651320|ref|ZP_14182420.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
2008-894]
gi|419653253|ref|ZP_14184231.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
2008-872]
gi|419655982|ref|ZP_14186812.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
2008-988]
gi|419658003|ref|ZP_14188642.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
1997-1]
gi|419661550|ref|ZP_14191874.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
2008-831]
gi|419663607|ref|ZP_14193800.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
1997-4]
gi|419665407|ref|ZP_14195476.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
1997-7]
gi|419667621|ref|ZP_14197583.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
1997-10]
gi|419669119|ref|ZP_14198914.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
1997-11]
gi|419671185|ref|ZP_14200858.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
1997-14]
gi|419673261|ref|ZP_14202736.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 51037]
gi|419677152|ref|ZP_14206309.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 87330]
gi|419679401|ref|ZP_14208405.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 87459]
gi|419681236|ref|ZP_14210079.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
140-16]
gi|419682182|ref|ZP_14210921.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 1213]
gi|419684180|ref|ZP_14212788.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 1577]
gi|419686957|ref|ZP_14215374.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 1798]
gi|419688392|ref|ZP_14216716.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 1854]
gi|419689600|ref|ZP_14217824.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 1893]
gi|419692524|ref|ZP_14220609.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 1928]
gi|419693844|ref|ZP_14221824.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
9872]
gi|419695193|ref|ZP_14223091.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
23210]
gi|419698194|ref|ZP_14225915.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
23211]
gi|424846843|ref|ZP_18271435.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni NW]
gi|424848769|ref|ZP_18273245.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni D2600]
gi|33301473|sp|Q9PI34.1|RL1_CAMJE RecName: Full=50S ribosomal protein L1
gi|81353965|sp|Q5HVZ2.1|RL1_CAMJR RecName: Full=50S ribosomal protein L1
gi|160165776|sp|A1VYJ1.1|RL1_CAMJJ RecName: Full=50S ribosomal protein L1
gi|166219570|sp|A7H4Q8.1|RL1_CAMJD RecName: Full=50S ribosomal protein L1
gi|172047072|sp|A8FKR0.1|RL1_CAMJ8 RecName: Full=50S ribosomal protein L1
gi|57166333|gb|AAW35112.1| ribosomal protein L1 [Campylobacter jejuni RM1221]
gi|85840493|gb|EAQ57750.1| ribosomal protein L1 [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85841268|gb|EAQ58516.1| ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 260.94]
gi|85842570|gb|EAQ59782.1| ribosomal protein L1 [Campylobacter jejuni subsp. jejuni HB93-13]
gi|87250217|gb|EAQ73175.1| ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 81-176]
gi|88190532|gb|EAQ94505.1| ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 84-25]
gi|112359836|emb|CAL34623.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni NCTC
11168 = ATCC 700819]
gi|152939448|gb|ABS44189.1| ribosomal protein L1 [Campylobacter jejuni subsp. doylei 269.97]
gi|157385732|gb|ABV52047.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 81116]
gi|205346582|gb|EDZ33214.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
CG8421]
gi|283792557|gb|EFC31336.1| ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 1336]
gi|284925742|gb|ADC28094.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
IA3902]
gi|307747407|gb|ADN90677.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni M1]
gi|315017741|gb|ADT65834.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|315057895|gb|ADT72224.1| LSU ribosomal protein L1p (L10Ae) [Campylobacter jejuni subsp.
jejuni S3]
gi|315928196|gb|EFV07513.1| ribosomal protein L1 [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|315929767|gb|EFV08937.1| ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 305]
gi|315931084|gb|EFV10058.1| ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 327]
gi|356485767|gb|EHI15755.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni NW]
gi|356487925|gb|EHI17863.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni D2600]
gi|380596927|gb|EIB17600.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
129-258]
gi|380599407|gb|EIB19777.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
23216]
gi|380601754|gb|EIB22061.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
23218]
gi|380602685|gb|EIB22936.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 51494]
gi|380603540|gb|EIB23631.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
23223]
gi|380607540|gb|EIB27397.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 60004]
gi|380611139|gb|EIB30697.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
23264]
gi|380613698|gb|EIB33168.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
23269]
gi|380613901|gb|EIB33359.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 55037]
gi|380616301|gb|EIB35510.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
9879]
gi|380616903|gb|EIB36090.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 86605]
gi|380619167|gb|EIB38259.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
23357]
gi|380624403|gb|EIB43055.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 53161]
gi|380626631|gb|EIB45079.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
9217]
gi|380630249|gb|EIB48491.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
2008-1025]
gi|380631450|gb|EIB49644.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
2008-894]
gi|380632774|gb|EIB50824.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
2008-872]
gi|380633920|gb|EIB51839.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
1997-1]
gi|380636083|gb|EIB53820.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
2008-988]
gi|380639893|gb|EIB57362.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
2008-831]
gi|380642645|gb|EIB59905.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
1997-4]
gi|380643511|gb|EIB60734.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
1997-7]
gi|380645576|gb|EIB62604.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
1997-10]
gi|380647913|gb|EIB64798.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
1997-11]
gi|380649699|gb|EIB66387.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
1997-14]
gi|380654153|gb|EIB70529.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 51037]
gi|380654966|gb|EIB71301.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 87330]
gi|380657408|gb|EIB73480.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 87459]
gi|380658626|gb|EIB74631.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni
140-16]
gi|380661865|gb|EIB77733.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 1213]
gi|380663213|gb|EIB78867.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 1798]
gi|380665663|gb|EIB81227.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 1854]
gi|380667403|gb|EIB82852.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 1577]
gi|380669475|gb|EIB84759.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 1928]
gi|380670604|gb|EIB85852.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni 1893]
gi|380671922|gb|EIB87113.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
9872]
gi|380675813|gb|EIB90704.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
23211]
gi|380679583|gb|EIB94425.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni LMG
23210]
gi|401780905|emb|CCK66600.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
gi|407905757|gb|AFU42586.1| 50S ribosomal protein L1 [Campylobacter jejuni subsp. jejuni PT14]
Length = 233
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A ++ A + ++ G +VG D ++ I++G + F +I P ++ + ++ +L
Sbjct: 75 VAVIAKDAKADEAKNAGADIVGSDDLVEEIQKGNMN---FDVLIATPNLMGLVGKVGRIL 131
Query: 221 --KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLE 278
K +P K+ T+ +D+ ++G + + + D Q G +G++ S+EQL
Sbjct: 132 GPKGLMPNPKTGTVTMDVAQAVNNAKSG-QVNFRVDKQ----GNIHAGLGKVSFSKEQLW 186
Query: 279 DNLKRILADISTMKPPS 295
DN+ + I+ KP +
Sbjct: 187 DNVSTFVKAINKHKPAA 203
>gi|160947358|ref|ZP_02094525.1| hypothetical protein PEPMIC_01292 [Parvimonas micra ATCC 33270]
gi|158446492|gb|EDP23487.1| ribosomal protein L1 [Parvimonas micra ATCC 33270]
Length = 231
Score = 41.2 bits (95), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 34/147 (23%), Positives = 69/147 (46%), Gaps = 14/147 (9%)
Query: 154 HGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG ++ ++ C +++ + +D G VG D I+ I+ F ++ P ++
Sbjct: 66 HGTGKTLRVLVLCKENKVQ-EAKDAGADYVGADDYIQKIQN--ENWFDFDVIVATPDMMG 122
Query: 212 DLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIG 268
+ RI +L K +P KS T+ D+ K ++ G ++Y + K +G
Sbjct: 123 VVGRIGKILGPKGLMPNPKSGTVTFDIANAVKEIKAGKVEYRVDK------ANIVHCPVG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPPS 295
++ E++E+NL+ I++ I KP +
Sbjct: 177 KVSFGAEKIEENLRTIISAIIKAKPSA 203
>gi|268678991|ref|YP_003303422.1| 50S ribosomal protein L1 [Sulfurospirillum deleyianum DSM 6946]
gi|268617022|gb|ACZ11387.1| ribosomal protein L1 [Sulfurospirillum deleyianum DSM 6946]
Length = 234
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 87 LQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDP--WTH 144
L+K K + + EALA I+ NL A T+E++ + +DP
Sbjct: 13 LKKVDKEKKYSVDEALANIK--------NLASAKFDETIEVALKLN------VDPRHADQ 58
Query: 145 IVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFV 203
+V G +++ +A ++ E A + + G +VG D I+ I+ G + F +
Sbjct: 59 MVRGSVVLPAGTGKTVRVAVIAKDEKADEAKAAGADIVGSDDLIEEIQAGRIN---FDVL 115
Query: 204 ICNPKILADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQT--GIKYSMKKDPQEQD 259
I P ++ + ++ +L K +P K+ T+ +D +AK ++ G + + + D Q
Sbjct: 116 IATPNMMGLVGKVGRILGPKGIMPNPKTGTVTMD---VAKAVENNKGGQVNFRVDKQ--- 169
Query: 260 FGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
G IG++ S Q+ +N + + I+ KP +
Sbjct: 170 -GNIHAGIGKISFSDAQIRENFESFIKAINKHKPAA 204
>gi|109896923|ref|YP_660178.1| 50S ribosomal protein L1 [Pseudoalteromonas atlantica T6c]
gi|410627138|ref|ZP_11337884.1| large subunit ribosomal protein L1 [Glaciecola mesophila KMM 241]
gi|123171718|sp|Q15YB4.1|RL1_PSEA6 RecName: Full=50S ribosomal protein L1
gi|109699204|gb|ABG39124.1| LSU ribosomal protein L1P [Pseudoalteromonas atlantica T6c]
gi|410153517|dbj|GAC24653.1| large subunit ribosomal protein L1 [Glaciecola mesophila KMM 241]
Length = 233
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 20/142 (14%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A +Q A ++ G +VG D + +++G + F V+ +P D MR+ G+L
Sbjct: 75 VAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGEMN---FDVVVASP----DAMRVVGML 127
Query: 221 ------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+ +P K+ T+ D+ K + G ++Y K+ G IG++
Sbjct: 128 GQILGPRGLMPNPKTGTVTPDVATAVKNAKAGQVRYRNDKN------GIIHASIGKIAFE 181
Query: 274 QEQLEDNLKRILADISTMKPPS 295
Q+E+NL ++ + KP S
Sbjct: 182 SNQIEENLAALIEAVKKAKPSS 203
>gi|385651991|ref|ZP_10046544.1| 50S ribosomal protein L1 [Leucobacter chromiiresistens JG 31]
Length = 229
Score = 41.2 bits (95), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 62/130 (47%), Gaps = 16/130 (12%)
Query: 200 FQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQ 256
F + P+++ + R+ +L R +P K+ T+ D ++ G I++ + K
Sbjct: 111 FDSAVSTPELMGKVGRLGKVLGPRGLMPNPKTGTVTPDAAKAVTEIKGGKIEFRVDK--- 167
Query: 257 EQDFGYSDFH--IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+S+ H +G+ S EQL DNL +L +IS +KP S ++ + + + P
Sbjct: 168 -----HSNVHFIVGKASFSAEQLTDNLNSVLDEISRLKPSS--AKGKYVQKGAVSTTFGP 220
Query: 315 EKFKLDLSGL 324
LD+SGL
Sbjct: 221 -GIPLDVSGL 229
>gi|407804649|ref|ZP_11151465.1| 50S ribosomal protein L1 [Alcanivorax sp. W11-5]
gi|407021395|gb|EKE33167.1| 50S ribosomal protein L1 [Alcanivorax sp. W11-5]
Length = 231
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 80/179 (44%), Gaps = 24/179 (13%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG +++ +A +Q A ++ G +VG D + ++ G + F VI P D
Sbjct: 67 HGTGKTVRVAVFAQGANADAAREAGADVVGFDDLAEQVQGGEIN---FDVVIATP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ D+ K + G ++Y K G
Sbjct: 120 AMRVVGKLGTILGPRGLMPNPKVGTVTADVATAVKNAKGGQVRYRTDKG------GIIHC 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGL 324
+IG++ +++NL+ ++AD+ +KP S ++ +I L + P +DL+ L
Sbjct: 174 NIGQVGFDVNAVKENLEALVADLKKIKPSS--AKGVYLKKITLSTTMGP-GLSIDLATL 229
>gi|406593638|ref|YP_006740817.1| 50S ribosomal protein L1 [Chlamydia psittaci NJ1]
gi|405789510|gb|AFS28252.1| ribosomal protein L1 [Chlamydia psittaci NJ1]
Length = 232
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ I+ F + E A + D G VG D ++ I+ G V F + P ++ ++
Sbjct: 70 GKTLKILVFAA-GEKAKEALDAGADFVGSDDLVEKIKGGWVD---FDVAVATPDMMREVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
++ +L R +PT K+ T+ D+ L+ G K K D G + IG+L
Sbjct: 126 KLGKVLGPRNLMPTPKAGTVTTDVTKTIAELRKG-KIEFKADRA----GVCNAGIGKLSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
L++N++ + + + KPP+
Sbjct: 181 DGHLLKENIEALCSALIKAKPPA 203
>gi|190346067|gb|EDK38069.2| hypothetical protein PGUG_02167 [Meyerozyma guilliermondii ATCC
6260]
Length = 282
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 10/161 (6%)
Query: 156 EDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMR 215
+D S++ F + + + +G G D I+ I+ G + + F P I+ DL
Sbjct: 122 KDNSVMVFSLDEQVIEEAKKLGAKAAGGLDLIEQIKSGNLKLDGFTQCYATPDIVKDLKP 181
Query: 216 IRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMS 273
I L K +PT K T+ ++I + I+ ++ P +Q + IGR D S
Sbjct: 182 IARALGPKGLMPTPKRNTVSENIIQL-------IQDNLGALPFKQKDQHLSMPIGRCDFS 234
Query: 274 QEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
++ NLK + +PP + + I + +L S P
Sbjct: 235 DAEIIANLKAASEAVYGAQPPGT-KKPNLIGQAVLSSTMGP 274
>gi|419569823|ref|ZP_14106879.1| 50S ribosomal protein L1 [Campylobacter coli 7--1]
gi|419572594|ref|ZP_14109496.1| 50S ribosomal protein L1 [Campylobacter coli 132-6]
gi|419586967|ref|ZP_14122920.1| 50S ribosomal protein L1 [Campylobacter coli 67-8]
gi|380548638|gb|EIA72537.1| 50S ribosomal protein L1 [Campylobacter coli 7--1]
gi|380550409|gb|EIA74071.1| 50S ribosomal protein L1 [Campylobacter coli 132-6]
gi|380565419|gb|EIA88155.1| 50S ribosomal protein L1 [Campylobacter coli 67-8]
Length = 233
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 112 TMYNLPRAFIGATVEISTTTHQKKVKYMDP--WTHIVEVEHSFDHGEDRSI-IAFCSQHE 168
T+ NL A TVEI+ + +DP +V G + + +A ++
Sbjct: 29 TVRNLKSAKFDETVEIALKLN------VDPRHADQMVRGSVVLPAGTGKKVRVAVIAKDA 82
Query: 169 TAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL--KKRIPT 226
+ ++ G +VG D I+ I++G + F +I P ++ + ++ +L K +P
Sbjct: 83 KVDEAKNAGADIVGSDDLIEEIQKGNMN---FDVLIATPNLMGLVGKVGRILGPKGLMPN 139
Query: 227 LKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILA 286
K+ T+ +D+ ++G + + + D Q G +G++ S+EQL DN+ +
Sbjct: 140 PKTGTVTMDVAQAVNNAKSG-QVNFRVDKQ----GNIHTGLGKVSFSKEQLWDNISTFIK 194
Query: 287 DISTMKPPS 295
I+ KP +
Sbjct: 195 AINKHKPAA 203
>gi|227497155|ref|ZP_03927403.1| ribosomal protein L1 [Actinomyces urogenitalis DSM 15434]
gi|226833412|gb|EEH65795.1| ribosomal protein L1 [Actinomyces urogenitalis DSM 15434]
Length = 228
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 72/157 (45%), Gaps = 15/157 (9%)
Query: 144 HIVEVEHSFDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
+V S HG ++ +I F +Q + A Q D G VG + I+ + G F
Sbjct: 57 QMVRGTVSLPHGTGKTARVIVF-AQGDRAQQALDAGADEVGGDELIEKVAGGWTD---FD 112
Query: 202 FVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQ 258
+ P ++ + R+ +L R +P K+ T+ +D+ ++ G I++ + +
Sbjct: 113 AAVATPDLMGKVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVSDIKGGRIEFRVDRAAN-- 170
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+F IG+ ++EQL DN + L +I +KP +
Sbjct: 171 ----LNFIIGKSSFTEEQLVDNFRAALDEILRLKPAT 203
>gi|397678093|ref|YP_006519629.1| 50S ribosomal protein L1 [Mycoplasma wenyonii str. Massachusetts]
gi|395456358|gb|AFN65300.1| 50S ribosomal protein L1 [Mycoplasma wenyonii str. Massachusetts]
Length = 212
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
Query: 177 GVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL--KKRIPTLKSQTLGV 234
G+ +G DTI+ I++G + FQ +I + + + L+++ +L K +P+ K+ T+
Sbjct: 72 GIDYLGGEDTIQKIQQGWMD---FQLIISSHQSMPKLLKLGKILGPKGLLPSPKNGTVVK 128
Query: 235 DLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPP 294
D + + G +K Q G IG+ + EQLE+N ++ + KPP
Sbjct: 129 DTREAVEIFRRG-----QKTLQNDSGGNVHLSIGQTSFTIEQLEENFNYLIKFLRAKKPP 183
Query: 295 SKPEDEDFITRILLWSEPSPEKFKLDLSGL 324
+ FI +I L S + ++L LS L
Sbjct: 184 A--VKSQFIKKITL-SATMGKSYELTLSSL 210
>gi|429757963|ref|ZP_19290493.1| ribosomal protein L1 [Actinomyces sp. oral taxon 181 str. F0379]
gi|429174554|gb|EKY16031.1| ribosomal protein L1 [Actinomyces sp. oral taxon 181 str. F0379]
Length = 238
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 88/205 (42%), Gaps = 23/205 (11%)
Query: 103 AAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYM-----DP--WTHIVEVEHSFDHG 155
AA + H +Y+ P A + E S T V+ + DP +V S HG
Sbjct: 10 AAAEKIHAGELYS-PLAAMRLAKETSVTKFDSTVEVVMRLGVDPRKADQMVRGTVSLPHG 68
Query: 156 EDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADL 213
++ ++ F E A + D G VG + I+ + +G F + P ++ +
Sbjct: 69 TGKTSRVLVFAV-GERAQEAIDAGADEVGGDELIEKVAKGYTD---FDVAVATPDLMGKV 124
Query: 214 MRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRL 270
R+ +L R +P K+ T+ +D+ K ++ G I++ + K F +G+
Sbjct: 125 GRLGRVLGPRGLMPNPKTGTVTMDVAKAVKEIKGGRIEFRVDKHANLA------FIVGKA 178
Query: 271 DMSQEQLEDNLKRILADISTMKPPS 295
+ EQL +N +L +I +KP S
Sbjct: 179 SFTAEQLVENYAVVLEEILRLKPAS 203
>gi|293399723|ref|ZP_06643869.1| ribosomal protein L1 [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|373453941|ref|ZP_09545826.1| ribosomal protein L1 [Eubacterium sp. 3_1_31]
gi|291306123|gb|EFE47366.1| ribosomal protein L1 [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|371962757|gb|EHO80339.1| ribosomal protein L1 [Eubacterium sp. 3_1_31]
Length = 228
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 68/146 (46%), Gaps = 13/146 (8%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG ++ + +Q + +D G VG + ++ I++G F ++ P ++ +
Sbjct: 67 HGTGKTQKVCVITQGPKEQEAKDAGADFVGGKELLEEIQKGWFD---FDVIVATPNMMGE 123
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
L ++ LL K +P K+ T+ +D+ + ++ G ++Y + K+ G + IG+
Sbjct: 124 LGKLGRLLGPKGLMPNPKTGTVTMDVAKAVEDIKKGKVEYRVDKE------GNINLMIGK 177
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
+ E+L DN I I +P +
Sbjct: 178 VSFDDEKLVDNFNAIYNTIVKARPAA 203
>gi|296120711|ref|YP_003628489.1| 50S ribosomal protein L1 [Planctomyces limnophilus DSM 3776]
gi|296013051|gb|ADG66290.1| ribosomal protein L1 [Planctomyces limnophilus DSM 3776]
Length = 235
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 77/178 (43%), Gaps = 15/178 (8%)
Query: 144 HIVEVEHSFDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
IV F HG +S ++ F +Q + QD G VG + I+ G V F
Sbjct: 65 QIVRGSIVFPHGIGKSKRVLVF-AQGDNVKIAQDAGAEFVGGKELADKIKEGWVD---FD 120
Query: 202 FVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQD 259
I P ++ + + +L R +P+ ++ T+ D+ K + G K + D D
Sbjct: 121 VAIATPDMMGVVGPLGRVLGPRGLMPSPRAGTVTADVAAAVKEYRAG-KVEFRVD----D 175
Query: 260 FGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKF 317
G +G++ ++QL +N++ L I ++KP + +I I++ +P +
Sbjct: 176 GGNVHCVVGKMSFGEQQLIENVEAFLKYIRSLKPAT--SKGQYIRNIVIVGSMTPAVY 231
>gi|392553741|ref|ZP_10300878.1| 50S ribosomal protein L1 [Pseudoalteromonas spongiae UST010723-006]
Length = 234
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A ++ G LVG D + +++G + F V+ +P D
Sbjct: 67 HGTGREVRVAVFTQGANADAAKEAGADLVGMDDLAEQVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K+ T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKTGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKP 293
IG++D QL++NL+ ++ + KP
Sbjct: 174 TIGKVDFDANQLQENLEALIIALKKAKP 201
>gi|291280158|ref|YP_003496993.1| 50S ribosomal protein L1 [Deferribacter desulfuricans SSM1]
gi|290754860|dbj|BAI81237.1| 50S ribosomal protein L1 [Deferribacter desulfuricans SSM1]
Length = 233
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 69/149 (46%), Gaps = 13/149 (8%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S HG R + + ++ E A + ++ G VGD D K I+ G + F + P +
Sbjct: 64 SLPHGTGRQVKVLVFAKGEKAKEAEEAGADYVGDEDLAKKIQEGWLD---FDKAVATPDM 120
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
+ + ++ +L R +P K T+ ++ + K+L+ G I+Y + K G
Sbjct: 121 MPVVGKLGRILGPRGLMPNPKVGTVTNNIKDVVKQLKAGMIEYRVDK------AGIVHAP 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G+ E+L +N+K ++ + KP S
Sbjct: 175 VGKKSFETEKLVENVKTLMDSLVKAKPAS 203
>gi|281422261|ref|ZP_06253260.1| ribosomal protein L1 [Prevotella copri DSM 18205]
gi|281403766|gb|EFB34446.1| ribosomal protein L1 [Prevotella copri DSM 18205]
Length = 230
Score = 41.2 bits (95), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 23/149 (15%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNPK 208
G+ ++A C+ + AA ++ G VG + ++ I+ G ++TMP+ C K
Sbjct: 70 GKVTRVLALCTPDQEAAA-KEAGADYVGLDEYVEKIKGGWTDIDVIITMPS-----CMGK 123
Query: 209 I--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
I L ++ RGL+ P KS T+ +D+ K ++ G K D + G
Sbjct: 124 IGPLGRVLGPRGLM----PNPKSGTVTMDVAKAVKEVKQG-----KIDFKVDKAGIIHTS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ M+ EQ+ +N K + + +KP +
Sbjct: 175 IGKVGMTPEQIYENAKEFINTVIKLKPAA 203
>gi|222823476|ref|YP_002575050.1| 50S ribosomal protein L1 [Campylobacter lari RM2100]
gi|254799836|sp|B9KFG4.1|RL1_CAMLR RecName: Full=50S ribosomal protein L1
gi|222538698|gb|ACM63799.1| 50S ribosomal protein L1 [Campylobacter lari RM2100]
Length = 233
Score = 41.2 bits (95), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 30/137 (21%), Positives = 68/137 (49%), Gaps = 10/137 (7%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A ++ A + ++ G +VG D ++ I++G + F +I P ++ + ++ +L
Sbjct: 75 VAVIAKDAKADEAKNAGADIVGSDDLVEEIQKGNMN---FDVLIATPNLMGLVGKVGRIL 131
Query: 221 --KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLE 278
K +P K+ T+ +D+ + G + + + D Q G +G++ +QEQL+
Sbjct: 132 GPKGLMPNPKTGTVTMDVAQAVNNAKNG-QVNFRVDKQ----GNIHAGLGKVSFTQEQLK 186
Query: 279 DNLKRILADISTMKPPS 295
+N+ + I+ KP +
Sbjct: 187 ENMSAFVKAINKHKPAA 203
>gi|431795666|ref|YP_007222570.1| 50S ribosomal protein L1 [Echinicola vietnamensis DSM 17526]
gi|430786431|gb|AGA76560.1| ribosomal protein L1 [Echinicola vietnamensis DSM 17526]
Length = 232
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVI 204
+V + H G++ ++ C+ + + ++ G VG D I IE G + +I
Sbjct: 62 VVALPHG--TGKEVKVLVLCTP-DKEEEAKEAGADYVGLDDYIAKIEGGWTDI---DVII 115
Query: 205 CNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
P ++A + R+ +L R +P KS T+ +++ K ++ G K D + FG
Sbjct: 116 TMPNVMAKVGRLGRVLGPRGLMPNPKSGTVTLEVGKAVKEVKGG-----KIDFKVDKFGI 170
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G++ +++++N + ++ IS +KP S
Sbjct: 171 VHASVGKVSFDPDKIQENAQELINTISKLKPAS 203
>gi|114319609|ref|YP_741292.1| 50S ribosomal protein L1P [Alkalilimnicola ehrlichii MLHE-1]
gi|122312464|sp|Q0ABI5.1|RL1_ALHEH RecName: Full=50S ribosomal protein L1
gi|114226003|gb|ABI55802.1| LSU ribosomal protein L1P [Alkalilimnicola ehrlichii MLHE-1]
Length = 231
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 88/204 (43%), Gaps = 29/204 (14%)
Query: 96 FQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWT--HIVEVEHSFD 153
+ EAL +RE LP A +VE++ +DP IV
Sbjct: 21 YPVAEALGLLRE--------LPGAKFTESVEVAVNLG------VDPRKSDQIVRGSTVLP 66
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
+G +++ +A +Q + A ++ G +VG D + ++ G + F V+ P +
Sbjct: 67 NGTGKTVRVAVFAQGDAAEAAKEAGADIVGMDDLAEQVKGGNLD---FDVVVAAPDAMGV 123
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
+ R+ +L R +P K T+ D+ G K + G ++Y K G IG+
Sbjct: 124 VGRLGPILGPRGLMPNPKVGTVTPDVAGAVKNAKAGQVRYRTDKG------GIIHCAIGK 177
Query: 270 LDMSQEQLEDNLKRILADISTMKP 293
+D E L+ NL+ ++ D+ +KP
Sbjct: 178 VDFEVEALQQNLQALITDLQKLKP 201
>gi|392311152|ref|ZP_10273686.1| 50S ribosomal protein L1 [Pseudoalteromonas citrea NCIMB 1889]
Length = 233
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 21/148 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A ++ G LVG + + +++G + F V+ +P D
Sbjct: 67 HGTGREVRVAVFTQGANADAAKEAGADLVGMEELAEQVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K+ T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKTGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKP 293
IG++D + QL++NL+ +L + KP
Sbjct: 174 TIGKVDFTAVQLQENLESLLVALKKAKP 201
>gi|365827605|ref|ZP_09369456.1| 50S ribosomal protein L1 [Actinomyces sp. oral taxon 849 str.
F0330]
gi|365264874|gb|EHM94660.1| 50S ribosomal protein L1 [Actinomyces sp. oral taxon 849 str.
F0330]
Length = 229
Score = 41.2 bits (95), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 70/151 (46%), Gaps = 17/151 (11%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S HG ++ + +Q E A Q G VG + I+ + +G F + P +
Sbjct: 64 SLPHGTGKTARVVVFAQGERAEQALAAGADEVGGDELIEKVAKGYTD---FDAAVATPDL 120
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
+ + R+ +L R +P ++ T+ +D+ ++ G I++ + + S+ H
Sbjct: 121 MGKVGRLGRVLGPRGLMPNPRTGTVTMDVAKAVSDIKGGRIEFRVDR--------ASNLH 172
Query: 267 --IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ S+EQLE N + L ++ +KP +
Sbjct: 173 FIIGKVSFSEEQLETNFQAALEEVLRLKPST 203
>gi|407784240|ref|ZP_11131419.1| 50S ribosomal protein L1 [Oceanibaculum indicum P24]
gi|407197584|gb|EKE67639.1| 50S ribosomal protein L1 [Oceanibaculum indicum P24]
Length = 231
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 83/176 (47%), Gaps = 16/176 (9%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S +G +S+ +A ++ + A + + G +VGD D + ++ G + F VI P +
Sbjct: 64 SLPNGTGKSVRVAVFAKGDKAEEARAAGADIVGDDDLAEKVQAGEMN---FDRVIATPDM 120
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
+ + ++ +L R +P K T+ ++ K + G +++ ++K G
Sbjct: 121 MVVVGKLGRVLGPRGLMPNPKLGTVTPNVGEAVKAAKGGQVEFRVEK------AGIIHAG 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLS 322
IG++ S+E L +NLK + +S KP +I +I L S P KLD++
Sbjct: 175 IGKVSFSEEALLENLKAFVGAVSRAKPAG--AKGTYIKKISLSSTMGP-GLKLDVA 227
>gi|297180343|gb|ADI16560.1| ribosomal protein l1 [uncultured gamma proteobacterium
HF0010_01E20]
Length = 225
Score = 41.2 bits (95), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 72/160 (45%), Gaps = 21/160 (13%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V + HG +++ +A +Q E A + + +G LVG D + ++ G + F
Sbjct: 50 QVVRGATTLPHGTGKTVRVAVFAQGENAEKARAVGADLVGFEDLAETVKDGQMD---FDV 106
Query: 203 VICNPKILADLMRIRGLLKKRI------PTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDP 255
VI P D MRI G L K + P K+ T+ D+ K + G +++ K
Sbjct: 107 VIATP----DAMRIVGQLGKMLGPRGLMPNPKTGTVTPDVETAVKNAKAGQVQFRTDK-- 160
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
G +G++ Q+ +N++ ++AD+ KP S
Sbjct: 161 ----AGIIHGSVGQVGFEPLQVRENVEALIADLKKAKPAS 196
>gi|452994656|emb|CCQ93765.1| ribosomal protein L1 (BL1) [Clostridium ultunense Esp]
Length = 229
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG ++ + ++ E A + + G VGD D I + +G F V+ P ++
Sbjct: 67 HGTGKTARVLVFAKGEKAKEAEQAGADFVGDDDLINKVAQGWFD---FDVVVATPDMMGA 123
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
+ ++ LL K +P K+ T+ DL K ++ G ++Y K G IG+
Sbjct: 124 VGKLGRLLGPKGLMPNPKTGTVTFDLERAIKEIKAGKVEYRTDKT------GNVHVPIGK 177
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
+ +L +NLK I+ + +KP +
Sbjct: 178 VSFDSHKLVENLKTIVEQLIRVKPAT 203
>gi|407455525|ref|YP_006734416.1| 50S ribosomal protein L1 [Chlamydia psittaci GR9]
gi|405782068|gb|AFS20817.1| ribosomal protein L1 [Chlamydia psittaci GR9]
Length = 232
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ I+ F + E A + D G VG D ++ I+ G V F + P ++ ++
Sbjct: 70 GKTLKILVFAA-GEKAKEALDAGADFVGSDDLVEKIKGGWVD---FDVAVATPDMMREVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
++ +L R +PT K+ T+ +D+ L+ G K K D G + +G+L
Sbjct: 126 KLGKVLGPRNLMPTPKAGTVTMDVTKTIAELRKG-KIEFKADRA----GVCNAGVGKLSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
L++N++ + + + KPP+
Sbjct: 181 DGHLLKENIEALCSALIKAKPPA 203
>gi|289523623|ref|ZP_06440477.1| ribosomal protein L1 [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503315|gb|EFD24479.1| ribosomal protein L1 [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 236
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 96/220 (43%), Gaps = 39/220 (17%)
Query: 87 LQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIV 146
L+K K++ + +EAL + E P+A TVE+ +DP
Sbjct: 12 LEKVDKVKFYGLREALELLAE--------FPKAKFDETVEVHIRLG------VDPRHADQ 57
Query: 147 EVEH--SFDHG--EDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V S HG +++ ++ S E + ++ G VG D ++ IE G + F
Sbjct: 58 QVRGTVSLPHGTGQEKRVLVIAS-GEKIKEAEEAGADFVGGEDMVQKIEGGWLD---FDA 113
Query: 203 VICNPKILADLMRIRGLLKK------RIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDP 255
VI P D+MR+ G L + +P+ K+ T+ D+ + ++ G I++ + +
Sbjct: 114 VIATP----DMMRVVGRLGRILGPRGLMPSAKTGTVTFDVGEAVREIKAGRIEFRVDR-- 167
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G IG++ + + L DN K +L + +P +
Sbjct: 168 ----YGIIHVGIGKMSFTPDMLFDNAKTLLRAVLRARPAA 203
>gi|374263349|ref|ZP_09621897.1| 50S ribosomal protein L1 [Legionella drancourtii LLAP12]
gi|363535939|gb|EHL29385.1| 50S ribosomal protein L1 [Legionella drancourtii LLAP12]
Length = 231
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 23/171 (13%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A +Q + A + +D G +VG D I+ G TM F VI P D MRI G L
Sbjct: 75 VAVFAQGDNATKAKDAGADIVGFEDLADKIKAG--TM-DFDVVIATP----DAMRIVGQL 127
Query: 221 ------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+ +P K T+ ++ K ++G ++Y K+ G +G++D +
Sbjct: 128 GQILGPRGLMPNPKVGTVTTNVEAAVKDAKSGQVRYRTDKN------GIIHCTVGKVDFA 181
Query: 274 QEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGL 324
E + +N+ +++D+ KP + ++ +I L + P +D+S L
Sbjct: 182 AEDVIENIVALVSDLKKAKPSA--SKGQYLKKISLSTTMGP-GLAIDISSL 229
>gi|119502912|ref|ZP_01624997.1| transcriptional regulator, GntR family protein [marine gamma
proteobacterium HTCC2080]
gi|119461258|gb|EAW42348.1| transcriptional regulator, GntR family protein [marine gamma
proteobacterium HTCC2080]
Length = 231
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG + +A +Q E A + + G VG + + ++ G M F V+ +P D
Sbjct: 67 HGTGSVVRVAVFTQGENAEKAKAAGADFVGMDELAEQVKGG---MMDFDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K+ T+ D+ G + G +++ K+ G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKTGTVTPDVEGAVNNAKAGQMRFRTDKN------GIIQG 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ +QL NL ++AD+ KP S
Sbjct: 174 GIGKVAFETDQLRGNLMAVMADLKKAKPAS 203
>gi|325188926|emb|CCA23455.1| 50S ribosomal protein L1 putative [Albugo laibachii Nc14]
Length = 242
Score = 40.8 bits (94), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 66/136 (48%), Gaps = 12/136 (8%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A ++ A + + G ++VG D I+ ++ G + F I P +++ + R+ +L
Sbjct: 101 VAVFARGTKAEEARSAGASIVGAEDLIEIVQSGKLE---FDRCIATPDMMSLVGRVARIL 157
Query: 221 KKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQL 277
R +P K TL +D++ ++G ++Y +K+ G IGR+ +++ L
Sbjct: 158 GPRGLMPNPKLGTLTLDVVSAVNAAKSGQVEYRAEKN------GVIHAGIGRVSFTEDAL 211
Query: 278 EDNLKRILADISTMKP 293
N++ + IS KP
Sbjct: 212 LGNIRSFMLAISDAKP 227
>gi|358061004|ref|ZP_09147690.1| 50S ribosomal protein L1 [Staphylococcus simiae CCM 7213]
gi|357256527|gb|EHJ06889.1| 50S ribosomal protein L1 [Staphylococcus simiae CCM 7213]
Length = 231
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ +S++ F + + A+ + G VG+++ ++ I++G F V+ P ++ ++
Sbjct: 70 GKSQSVLVFA-KGDKIAEAEAAGADYVGEAEYVQKIQQGWFD---FDVVVATPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKA------GIVHASIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
+ EQL +N K + ++ KP S
Sbjct: 180 FTDEQLIENFKALQDVLAKAKPSS 203
>gi|227494534|ref|ZP_03924850.1| ribosomal protein L1 [Actinomyces coleocanis DSM 15436]
gi|226832268|gb|EEH64651.1| ribosomal protein L1 [Actinomyces coleocanis DSM 15436]
Length = 237
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 85/205 (41%), Gaps = 23/205 (11%)
Query: 103 AAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYM-----DP--WTHIVEVEHSFDHG 155
AA + H +YN P + STT V+ M DP +V + HG
Sbjct: 9 AAAEKVHAGEIYN-PLQAMELAKATSTTKFDATVEVMFRLSVDPRKADQMVRGTVTLPHG 67
Query: 156 EDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADL 213
++ ++ F A L D G VG + I+ + +G F + P ++ +
Sbjct: 68 TGKTARVLVFAVGDRAQAAL-DAGADEVGGDELIEKVAKGYTD---FDVAVATPDLMGKV 123
Query: 214 MRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRL 270
R+ +L R +P K+ T+ +D+ K ++ G I++ + K F +G+
Sbjct: 124 GRLGRVLGPRGLMPNPKTGTVTMDVAKAVKEIKGGRIEFRVDKHANLA------FIVGKT 177
Query: 271 DMSQEQLEDNLKRILADISTMKPPS 295
+ EQL N +L ++ +KP +
Sbjct: 178 SFTAEQLAQNYAAVLEEVLRLKPSA 202
>gi|374603246|ref|ZP_09676228.1| 50S ribosomal protein L1 [Paenibacillus dendritiformis C454]
gi|374391115|gb|EHQ62455.1| 50S ribosomal protein L1 [Paenibacillus dendritiformis C454]
Length = 230
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 20/123 (16%)
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVIC--NPKILADLMRIRGLL--KKRIPTLKSQTLGVD 235
VGD D I I++G F F +C P +++++ ++ +L K +P K+ T+ D
Sbjct: 94 FVGDQDMINKIQQGW-----FDFDVCVATPDMMSEVGKLGRILGGKGLMPNPKAGTVTFD 148
Query: 236 LIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH--IGRLDMSQEQLEDNLKRILADISTMK 292
+ + ++ G I+Y + + Q H IG+ S EQL +NLK ++ ++ K
Sbjct: 149 VAKAIQEIKAGKIEYRLDRAGQ--------IHAPIGKASFSAEQLNENLKALIDALNRAK 200
Query: 293 PPS 295
P +
Sbjct: 201 PAA 203
>gi|321309759|ref|YP_004192088.1| 50S ribosomal protein L1 [Mycoplasma haemofelis str. Langford 1]
gi|385859133|ref|YP_005905643.1| 50S ribosomal protein L1 [Mycoplasma haemofelis Ohio2]
gi|319801603|emb|CBY92249.1| ribosomal protein L1 [Mycoplasma haemofelis str. Langford 1]
gi|334192834|gb|AEG72562.1| 50S ribosomal protein L1 [Mycoplasma haemofelis Ohio2]
Length = 207
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 76/152 (50%), Gaps = 13/152 (8%)
Query: 172 QLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKS 229
++Q++G+ G + I+ I+ G + F ++ K++ + ++ +L R +P+ K
Sbjct: 67 EVQELGIDHYGGKEVIEKIKEGWLD---FDVILTTAKMMPFISKLGKVLGPRNLMPSPKM 123
Query: 230 QTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADIS 289
T+ D+ + G K S+K D FG IG+LD +E+LE+N + ++ I
Sbjct: 124 GTVVTDVKKAVLEFKKG-KVSLKND----TFGNVHVVIGKLDFPKEKLEENYEFVMNLIR 178
Query: 290 TMKPPSKPEDEDFITRILLWSEPSPEKFKLDL 321
+ KP K +I ++ + S P F+LD+
Sbjct: 179 SRKP--KVFKGKYIDKVHISSTMGPS-FRLDI 207
>gi|304405631|ref|ZP_07387290.1| ribosomal protein L1 [Paenibacillus curdlanolyticus YK9]
gi|304345670|gb|EFM11505.1| ribosomal protein L1 [Paenibacillus curdlanolyticus YK9]
Length = 230
Score = 40.8 bits (94), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 61/120 (50%), Gaps = 16/120 (13%)
Query: 181 VGDSDTIKGIERGLVTMPTFQFVIC--NPKILADLMRIRGLL--KKRIPTLKSQTLGVDL 236
VGDSD I I++G F F +C P ++A++ ++ +L K +P K+ T+ D+
Sbjct: 95 VGDSDVINKIQQGW-----FDFDVCVATPDMMAEVGKLGRILGGKGLMPNPKAGTVTFDV 149
Query: 237 IGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+ ++ G I+Y + + Q IG++ E+L +NLK ++ ++ KP S
Sbjct: 150 SKAVQEIKAGKIEYRLDRAGQIL------APIGKVSFDAEKLAENLKSLMDALNRAKPAS 203
>gi|374623994|ref|ZP_09696484.1| 50S ribosomal protein L1 [Ectothiorhodospira sp. PHS-1]
gi|373943085|gb|EHQ53630.1| 50S ribosomal protein L1 [Ectothiorhodospira sp. PHS-1]
Length = 231
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 21/160 (13%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V +G +++ +A +Q A ++ G +VG D ++ G + F
Sbjct: 57 QVVRGSTVLPNGTGKTVRVAVFTQGANADAAREAGADIVGMDDLAAEVKAGNLN---FDV 113
Query: 203 VICNPKILADLMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDP 255
VI +P D MR+ G L + +P K T+ D+ G + + G ++Y K
Sbjct: 114 VIASP----DAMRVVGQLGQILGPRGLMPNPKVGTVAADVAGAVRNAKAGQVRYRTDKG- 168
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
G IG + + LE+NL +L D+ KP +
Sbjct: 169 -----GIIHCTIGNVSFEPKALEENLMALLGDLMKAKPAA 203
>gi|302345058|ref|YP_003813411.1| 50S ribosomal protein L1 [Prevotella melaninogenica ATCC 25845]
gi|302149896|gb|ADK96158.1| ribosomal protein L1 [Prevotella melaninogenica ATCC 25845]
Length = 230
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 83/187 (44%), Gaps = 32/187 (17%)
Query: 126 EISTTTHQKKVKY-----MDP--WTHIVEVEHSFDHGEDR--SIIAFCSQHETAAQLQDM 176
EI+TT V +DP +V S HG + ++ C+ + AA ++
Sbjct: 32 EITTTKFDASVDVDVRLGVDPRKANQMVRGVVSLPHGTGKVTRVLCLCTPDQEAAA-KEA 90
Query: 177 GVALVGDSDTIKGIERG------LVTMPTFQFVICNPKI--LADLMRIRGLLKKRIPTLK 228
G VG + ++ I+ G ++TMP+ C K+ L ++ RGL+ P K
Sbjct: 91 GADYVGLDEYVEKIKGGWTDIDVIITMPS-----CMGKLGPLGRVLGPRGLM----PNPK 141
Query: 229 SQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADI 288
S T+ +D+ K ++ G K D + G IG++ MS EQ+ N K ++ +
Sbjct: 142 SGTVTMDVAKAVKDVKQG-----KIDFKVDKAGIIHTSIGKVSMSPEQIYGNAKEFISTV 196
Query: 289 STMKPPS 295
+KP +
Sbjct: 197 IKLKPAA 203
>gi|379730424|ref|YP_005322620.1| 50S ribosomal protein L1 [Saprospira grandis str. Lewin]
gi|378576035|gb|AFC25036.1| 50S ribosomal protein L1 [Saprospira grandis str. Lewin]
Length = 230
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 68/143 (47%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+++ ++ FC+ + + ++ G G + I I+ G + V+ P ++A +
Sbjct: 70 GKEKKVLVFCT-PDKEQEAKEAGADYAGLQEYITKIQEGWTDV---DVVVAMPSVMAQVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
R+ +L R +P K+ T+ ++ + ++ G K S + D +G +GR+
Sbjct: 126 RLGRVLGPRGLMPNPKTGTVTPNVGDAVREIKKG-KTSFRVD----KYGIVHTSVGRVQF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
QL +N + ++ +S MKP S
Sbjct: 181 QPNQLVENAQEVIETLSRMKPSS 203
>gi|343505877|ref|ZP_08743420.1| 50S ribosomal protein L1 [Vibrio ichthyoenteri ATCC 700023]
gi|343511352|ref|ZP_08748518.1| 50S ribosomal protein L1 [Vibrio scophthalmi LMG 19158]
gi|343514042|ref|ZP_08751125.1| 50S ribosomal protein L1 [Vibrio sp. N418]
gi|342798403|gb|EGU34022.1| 50S ribosomal protein L1 [Vibrio scophthalmi LMG 19158]
gi|342800837|gb|EGU36345.1| 50S ribosomal protein L1 [Vibrio sp. N418]
gi|342805565|gb|EGU40823.1| 50S ribosomal protein L1 [Vibrio ichthyoenteri ATCC 700023]
Length = 233
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G LVG D + +++G + F V+ +P D
Sbjct: 67 HGTGRDIRVAVFAQGANAEAAKEAGADLVGMEDLAELVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ QL++NL+ +L + KP S
Sbjct: 174 TIGKVSFDANQLQENLEALLVALKKAKPSS 203
>gi|295397930|ref|ZP_06807987.1| 50S ribosomal protein L1 [Aerococcus viridans ATCC 11563]
gi|294973815|gb|EFG49585.1| 50S ribosomal protein L1 [Aerococcus viridans ATCC 11563]
Length = 229
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 82/172 (47%), Gaps = 14/172 (8%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D++++ F + E A + +D G VGD + I+ I+ G F ++ P ++ +
Sbjct: 70 GKDQTVLVFA-KGEKAQEAKDAGADYVGDDEFIQKIQGGWF---DFDVIVATPDMMGQIG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
R+ +L K +P K+ T+ D+ + ++ G + + + D G +G++
Sbjct: 126 RLGRVLGPKGLMPNPKTGTVTQDVTKAVQDIKAG-QVAYRADSA----GNLHLPVGKVSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGL 324
+ + L +N+K + + +KP S +I + + S P ++D+S +
Sbjct: 181 TTDALAENVKAVQEMVLRVKPAS--SKGTYIKNLAITSTMGP-GIQVDVSSI 229
>gi|421858353|ref|ZP_16290624.1| ribosomal protein L1 [Paenibacillus popilliae ATCC 14706]
gi|410832111|dbj|GAC41061.1| ribosomal protein L1 [Paenibacillus popilliae ATCC 14706]
Length = 230
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 61/123 (49%), Gaps = 20/123 (16%)
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVIC--NPKILADLMRIRGLL--KKRIPTLKSQTLGVD 235
VGD D I I++G F F +C P +++++ ++ +L K +P K+ T+ D
Sbjct: 94 FVGDQDMINKIQQGW-----FDFDVCVATPDMMSEVGKLGRILGGKGLMPNPKAGTVTFD 148
Query: 236 LIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH--IGRLDMSQEQLEDNLKRILADISTMK 292
+ + ++ G I+Y + + Q H IG+ S EQL +NLK ++ ++ K
Sbjct: 149 VAKAIQEIKAGKIEYRLDRAGQ--------IHAPIGKASFSAEQLNENLKALIDALNRAK 200
Query: 293 PPS 295
P +
Sbjct: 201 PAA 203
>gi|239636937|ref|ZP_04677935.1| ribosomal protein L1 [Staphylococcus warneri L37603]
gi|417643001|ref|ZP_12293072.1| ribosomal protein L1 [Staphylococcus warneri VCU121]
gi|445060484|ref|YP_007385888.1| 50S ribosomal protein L1 [Staphylococcus warneri SG1]
gi|239597485|gb|EEQ79984.1| ribosomal protein L1 [Staphylococcus warneri L37603]
gi|330686255|gb|EGG97867.1| ribosomal protein L1 [Staphylococcus epidermidis VCU121]
gi|443426541|gb|AGC91444.1| 50S ribosomal protein L1 [Staphylococcus warneri SG1]
Length = 231
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ + ++ F + + + ++ G VG+SD ++ I++G F V+ P ++ ++
Sbjct: 70 GKSQRVLVFA-KGDKITEAEEAGADYVGESDYVQKIQQGWFD---FDVVVATPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKA------GIVHASIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
S E+L +N K + ++ KP S
Sbjct: 180 FSDEKLVENFKALQDVLAKAKPSS 203
>gi|52424263|ref|YP_087400.1| 50S ribosomal protein L1 [Mannheimia succiniciproducens MBEL55E]
gi|61215481|sp|Q65W45.1|RL1_MANSM RecName: Full=50S ribosomal protein L1
gi|52306315|gb|AAU36815.1| RplA protein [Mannheimia succiniciproducens MBEL55E]
Length = 229
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
+G RS+ +A +Q A ++ G LVG D + I++G + F VI +P D
Sbjct: 67 NGTGRSVRVAVFTQGANADAAKEAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G ++Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVADAVKNAKSGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ S E L NL+ +LA + KP +
Sbjct: 174 TIGKASFSAEALTQNLQALLAALVKAKPTT 203
>gi|350560731|ref|ZP_08929571.1| ribosomal protein L1 [Thioalkalivibrio thiocyanoxidans ARh 4]
gi|349782999|gb|EGZ37282.1| ribosomal protein L1 [Thioalkalivibrio thiocyanoxidans ARh 4]
Length = 231
Score = 40.8 bits (94), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 94/226 (41%), Gaps = 32/226 (14%)
Query: 105 IRETHHPT-MYNLPRAFIGATVEISTTTHQKKVKY-----MDPWT--HIVEVEHSFDHGE 156
IRE HP Y + AF E+S ++ + +DP +V +G
Sbjct: 11 IREKLHPGQAYPVGEAF-DLLREVSGVKFRESIDVSVNLGVDPRKSDQVVRGSTVLPNGT 69
Query: 157 DRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMR 215
+++ +A +Q A ++ G ++G D + + G + F VI +P D MR
Sbjct: 70 GKTVRVAVFTQGANADAAREAGADIIGMDDLAEQVRAGELN---FDVVIASP----DAMR 122
Query: 216 IRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIG 268
+ G L + +P K T+ D+ K ++G ++Y K G IG
Sbjct: 123 VVGQLGQILGPRGLMPNPKVGTVTPDVATAVKNAKSGQVRYRTDKG------GIIHCSIG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+D + L +NL +LAD+ +KP + ++ R+ + S P
Sbjct: 177 AVDFDSQALTENLNALLADLMKLKPST--AKGVYVRRVTVSSTMGP 220
>gi|300871173|ref|YP_003786045.1| 50S ribosomal protein L1 [Brachyspira pilosicoli 95/1000]
gi|404477059|ref|YP_006708490.1| 50S ribosomal protein L1 [Brachyspira pilosicoli B2904]
gi|431808068|ref|YP_007234966.1| 50S ribosomal protein L1 [Brachyspira pilosicoli P43/6/78]
gi|434381166|ref|YP_006702949.1| 50S ribosomal protein L1 [Brachyspira pilosicoli WesB]
gi|300688873|gb|ADK31544.1| 50S ribosomal protein L1 [Brachyspira pilosicoli 95/1000]
gi|404429815|emb|CCG55861.1| 50S ribosomal protein L1 [Brachyspira pilosicoli WesB]
gi|404438548|gb|AFR71742.1| 50S ribosomal protein L1 [Brachyspira pilosicoli B2904]
gi|430781427|gb|AGA66711.1| 50S ribosomal protein L1 [Brachyspira pilosicoli P43/6/78]
Length = 233
Score = 40.8 bits (94), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 70/154 (45%), Gaps = 13/154 (8%)
Query: 144 HIVEVEHSFDH--GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
H + SF + G+++ ++ F +Q E A + ++ G VG D I I+ G F
Sbjct: 59 HTIRDTLSFPNAFGKEKRVVVF-AQGEKADEAKNAGAMEVGFEDLISKIKGGYTD---FD 114
Query: 202 FVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQD 259
I P ++ ++ ++ +L ++ +P K+ T+ +D+ K + G + + +
Sbjct: 115 VAISTPDLMKEVGKLGQILGRKGLMPNPKTGTVTLDIAQAVKSFKAG-----RMEYRADK 169
Query: 260 FGYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
FG IG+ M +L +N + +I KP
Sbjct: 170 FGVVRMAIGKASMDVNKLNENFRAFYDEILRKKP 203
>gi|406672304|ref|ZP_11079530.1| 50S ribosomal protein L1 [Bergeyella zoohelcum CCUG 30536]
gi|423316172|ref|ZP_17294077.1| 50S ribosomal protein L1 [Bergeyella zoohelcum ATCC 43767]
gi|405584242|gb|EKB58158.1| 50S ribosomal protein L1 [Bergeyella zoohelcum ATCC 43767]
gi|405587992|gb|EKB61710.1| 50S ribosomal protein L1 [Bergeyella zoohelcum CCUG 30536]
Length = 230
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 101/234 (43%), Gaps = 31/234 (13%)
Query: 87 LQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIV 146
L K K RI+ EA A ++E + A A+V+I+ K +V
Sbjct: 12 LSKVEKGRIYNLDEATALVKEVN--------TAKFDASVDIAVRLGVDPRKANQMVRGVV 63
Query: 147 EVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTF 200
+ H G+D ++A + + A + ++ G VG + ++ I+ G +VTMP
Sbjct: 64 SLPHG--TGKDVKVLALVTPDKEA-EAKEAGADFVGLDEYLEKIKNGWTDVDVIVTMPA- 119
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
V+ L ++ RGL+ P KS T+ +++ +++G K D + +
Sbjct: 120 --VMGKLGPLGRVLGPRGLM----PNPKSGTVTMEIGKAVSEVKSG-----KIDFKVDKY 168
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
G IG++ ++L++N +L + +KP + ++ + L S SP
Sbjct: 169 GIVHAAIGKVSFDAQKLKENAVELLQTLQKLKPTA--AKGTYVKSVYLSSTMSP 220
>gi|34540218|ref|NP_904697.1| 50S ribosomal protein L1 [Porphyromonas gingivalis W83]
gi|188995438|ref|YP_001929690.1| 50S ribosomal protein L1 [Porphyromonas gingivalis ATCC 33277]
gi|334147292|ref|YP_004510221.1| 50S ribosomal protein L1 [Porphyromonas gingivalis TDC60]
gi|419970150|ref|ZP_14485660.1| ribosomal protein L1 [Porphyromonas gingivalis W50]
gi|61215672|sp|Q7MX30.1|RL1_PORGI RecName: Full=50S ribosomal protein L1
gi|226724952|sp|B2RL48.1|RL1_PORG3 RecName: Full=50S ribosomal protein L1
gi|34396530|gb|AAQ65596.1| ribosomal protein L1 [Porphyromonas gingivalis W83]
gi|188595118|dbj|BAG34093.1| 50S ribosomal protein L1 [Porphyromonas gingivalis ATCC 33277]
gi|333804448|dbj|BAK25655.1| 50S ribosomal protein L1 [Porphyromonas gingivalis TDC60]
gi|392611565|gb|EIW94301.1| ribosomal protein L1 [Porphyromonas gingivalis W50]
Length = 232
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 78/183 (42%), Gaps = 28/183 (15%)
Query: 126 EISTTTHQKKVKY-----MDP--WTHIVEVEHSFDHGEDRSI--IAFCSQHETAAQLQDM 176
EI+TT V +DP +V + HG + I +A CS + A+ ++
Sbjct: 32 EITTTNFDASVDIDVRLGVDPRKANQMVRGVVTLPHGTGKQIRVLALCSPDK-EAEAKEA 90
Query: 177 GVALVGDSDTIKGIERG------LVTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQ 230
G VG + I+ I+ G ++TMP I L ++ RGL+ P KS
Sbjct: 91 GADYVGLDEYIEKIKAGWTDIDVIITMPAIMGKIGA---LGRVLGPRGLM----PNPKSG 143
Query: 231 TLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADIST 290
T+ D+ K ++ G K D + G IG++ S +Q+ DN + + I
Sbjct: 144 TVTNDVGAAVKEVKAG-----KIDFKVDKTGIVHTSIGKVSFSADQIRDNAREFINTIIK 198
Query: 291 MKP 293
+KP
Sbjct: 199 LKP 201
>gi|407070369|ref|ZP_11101207.1| 50S ribosomal protein L1 [Vibrio cyclitrophicus ZF14]
Length = 234
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G +VG D + +++G++ F V+ +P D
Sbjct: 67 HGTGREIRVAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGVMD---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ QL++NL+ +L + KP S
Sbjct: 174 TIGKASFEANQLQENLEALLVALKKAKPSS 203
>gi|387770896|ref|ZP_10127069.1| ribosomal protein L1 [Pasteurella bettyae CCUG 2042]
gi|386903317|gb|EIJ68133.1| ribosomal protein L1 [Pasteurella bettyae CCUG 2042]
Length = 229
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
+G R++ +A +Q A ++ G LVG D + +++G + F VI +P D
Sbjct: 67 NGTGRTVRVAVFTQGANADAAKEAGADLVGMEDLAEQVKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVADAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ S E L NL+ +LA ++ KP +
Sbjct: 174 TIGKASFSAEALTQNLQALLAALNKAKPTT 203
>gi|386845720|ref|YP_006263733.1| 50S ribosomal protein L1 [Actinoplanes sp. SE50/110]
gi|359833224|gb|AEV81665.1| 50S ribosomal protein L1 [Actinoplanes sp. SE50/110]
Length = 239
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 97/244 (39%), Gaps = 54/244 (22%)
Query: 63 KKKDIY--ASRKVDESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAF 120
++ IY A+ K+D+ L P+D + L K+ F
Sbjct: 3 QRSKIYRAAAAKIDDGKLYEPKDAVALAKETSSAKFD----------------------- 39
Query: 121 IGATVEISTTTHQKKVKYMDP--WTHIVEVEHSFDHGEDRS--IIAFCSQHETAAQLQDM 176
ATVE++ +DP +V + HG ++ +I F Q A +
Sbjct: 40 --ATVEVAMRLG------VDPRKADQMVRGTVNLPHGTGKTARVIVFA-QGAKAEEALAA 90
Query: 177 GVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGV 234
G VG + + I+ G + F I P +A + RI +L R +P K+ T+ V
Sbjct: 91 GADEVGTDELVARIQGGWLE---FDAAIATPDQMAKIGRIARILGPRGLMPNPKTGTVTV 147
Query: 235 DLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH--IGRLDMSQEQLEDNLKRILADISTM 291
D+ ++ G I + + K +S+ H IG+ S EQL DN +L ++
Sbjct: 148 DVTKAVNEIKGGKITFRVDK--------HSNLHLIIGKASFSTEQLIDNYAAVLDEVLRA 199
Query: 292 KPPS 295
KP +
Sbjct: 200 KPSA 203
>gi|451980673|ref|ZP_21929059.1| 50S ribosomal protein L1 [Nitrospina gracilis 3/211]
gi|451762009|emb|CCQ90298.1| 50S ribosomal protein L1 [Nitrospina gracilis 3/211]
Length = 235
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 65/145 (44%), Gaps = 15/145 (10%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF--VICNPKILAD 212
G+ ++ F + E + ++ G VG D +K I+ G F+F V+ P ++
Sbjct: 76 GKKFRVLVFA-KGEKETEAKEAGAEFVGGDDLVKKIQDGW-----FEFDRVVATPDMMGT 129
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ ++ +L R +P K+ T+ D+ +++Q G K D + G +G+
Sbjct: 130 VGKLGKVLGPRGLMPNPKTGTVTFDVADAIRQIQAG-----KVDFRVDKAGIVHASVGKA 184
Query: 271 DMSQEQLEDNLKRILADISTMKPPS 295
S E L +N K + + MKP +
Sbjct: 185 SFSVEDLAENFKEFMGTLVKMKPST 209
>gi|390939542|ref|YP_006403279.1| 50S ribosomal protein L1 [Sulfurospirillum barnesii SES-3]
gi|390192649|gb|AFL67704.1| ribosomal protein L1 [Sulfurospirillum barnesii SES-3]
Length = 234
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 97/216 (44%), Gaps = 31/216 (14%)
Query: 87 LQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDP--WTH 144
L+K K + + EAL I+ NL A T+E++ + +DP
Sbjct: 13 LKKIDKEKKYSVSEALGNIK--------NLASAKFDETIEVALKLN------VDPRHADQ 58
Query: 145 IVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFV 203
+V G +++ +A ++ E A + + G +VG D I+ I+ G + F +
Sbjct: 59 MVRGSVVLPAGTGKTVRVAVIAKDEKADEARAAGADIVGSDDLIEEIQAGRIN---FDVL 115
Query: 204 ICNPKILADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQT--GIKYSMKKDPQEQD 259
I P ++ + ++ +L K +P K+ T+ +D +AK ++ G + + + D Q
Sbjct: 116 IATPNMMGLVGKVGRILGPKGIMPNPKTGTVTMD---VAKAVENNKGGQVNFRVDKQ--- 169
Query: 260 FGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
G IG++ + EQ+ +N + + I+ KP +
Sbjct: 170 -GNIHAGIGKISFTDEQIRENFEAFIKAINKHKPAA 204
>gi|373465955|ref|ZP_09557381.1| ribosomal protein L1 [Lactobacillus kisonensis F0435]
gi|371758214|gb|EHO46988.1| ribosomal protein L1 [Lactobacillus kisonensis F0435]
Length = 235
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+++++I F ++ + A +D G VGD+D ++ I+ G + F I P ++A +
Sbjct: 71 GKEQTVIVF-AKGDNAKAAKDAGADFVGDADLVQKIQDGWL---DFDVAIATPDMMAQVG 126
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L K +P K+ T+ +D+ K + G + Y +D G +G++
Sbjct: 127 RLGRVLGPKGLMPNPKTGTVTMDVTKAVKESKAGKVTYRTDRD------GNVAVPVGKVS 180
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
+QL NLK I I +P S
Sbjct: 181 FGADQLVGNLKTIADVIVKARPAS 204
>gi|335047173|ref|ZP_08540194.1| ribosomal protein L1 [Parvimonas sp. oral taxon 110 str. F0139]
gi|333760981|gb|EGL38536.1| ribosomal protein L1 [Parvimonas sp. oral taxon 110 str. F0139]
Length = 231
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 154 HGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF--VICNPKI 209
HG ++ ++ C +++ + +D G VG D I+ I+ T F F ++ P +
Sbjct: 66 HGTGKTLRVLVLCKENKVQ-EAKDAGADYVGADDLIQKIQ----TENWFDFDVIVATPDM 120
Query: 210 LADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
+ + RI +L K +P KS T+ D+ K ++ G ++Y + K
Sbjct: 121 MGVVGRIGKVLGPKGLMPNPKSGTVTFDIANAVKEIKAGKVEYRVDK------ANIVHCP 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G++ E++E+NL+ I+ I KP +
Sbjct: 175 VGKVSFGAEKIEENLRTIITAIIKAKPSA 203
>gi|159896656|ref|YP_001542903.1| 50S ribosomal protein L1 [Herpetosiphon aurantiacus DSM 785]
gi|159889695|gb|ABX02775.1| ribosomal protein L1 [Herpetosiphon aurantiacus DSM 785]
Length = 237
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 31/218 (14%)
Query: 86 YLQKDYKL---RIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDP- 141
YL K+ R++ +EA A ++ET T ++ ATVE+ +DP
Sbjct: 9 YLAAAAKVEADRLYTPEEAAALVKETSF-TNFD-------ATVELHVRLG------IDPR 54
Query: 142 -WTHIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPT 199
V S HG +S+ + +Q +T ++ G +VG + I+ IE+
Sbjct: 55 HADQTVRSTASLPHGTGKSVRVLVFAQGDTENIARNAGAEIVGGDELIQRIEK--ENFID 112
Query: 200 FQFVICNPKILADLMRIRGLLKKR--IPTLKSQTL--GVDLIGIAKRLQTGIKYSMKKDP 255
F + P ++ + R+ +L +R +P KS T+ DL K LQ G + + D
Sbjct: 113 FDVAVATPDMMGKVGRLGRILGRRGLMPNPKSGTVVPPGDLPQAIKALQGG-RVEFRNDK 171
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
G IG++ + +Q+ +NL +L I KP
Sbjct: 172 T----GLLHVAIGKISFTPDQIRENLVVLLDAIKAAKP 205
>gi|244539332|dbj|BAH83375.1| 50S ribosomal protein L1 [Candidatus Ishikawaella capsulata Mpkobe]
Length = 236
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 154 HGEDR-SIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG + + IA +Q +A + +D G LVG D ++ I++G + F I P +
Sbjct: 69 HGTGKLTRIAVFAQGISAREAEDAGADLVGMDDLVEKIKQGEI---NFDVAIAAPDAMTI 125
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
+ +I +L R +P K T+ ++ ++ ++G ++Y K+ G IG+
Sbjct: 126 VSQIGQILGPRGLMPNPKMGTITSNIAEAVRKAKSGQVRYRNDKN------GIIHTSIGK 179
Query: 270 LDMSQEQLEDNLKRILADISTMKP 293
++ QL +NL +L ++ T+KP
Sbjct: 180 VNFEVIQLIENLDALLKNLQTVKP 203
>gi|149376696|ref|ZP_01894455.1| ribosomal protein L1 [Marinobacter algicola DG893]
gi|149359069|gb|EDM47534.1| ribosomal protein L1 [Marinobacter algicola DG893]
Length = 232
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/189 (23%), Positives = 82/189 (43%), Gaps = 24/189 (12%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V HG +++ +A +Q A + G +VG D + +++G + F
Sbjct: 58 QVVRSSTVLPHGTGKTVRVAVFTQGANAEKATAAGADIVGMDDLAEEVKKGNMD---FDV 114
Query: 203 VICNPKILADLMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDP 255
VI P D MR+ G L + +P K T+ D+ K + G ++Y K+
Sbjct: 115 VIATP----DAMRVVGQLGQILGPRGLMPNPKVGTVTPDVETAVKNAKAGQVRYRTDKN- 169
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPE 315
G +G ++ S + +++NL+ ++AD+ KP S ++ ++ L S P
Sbjct: 170 -----GIIHAPMGNVEFSAQNIKENLEALIADLKKAKPSS--SKGVYLKKVTLSSTMGP- 221
Query: 316 KFKLDLSGL 324
+D S L
Sbjct: 222 GLTIDQSAL 230
>gi|388457602|ref|ZP_10139897.1| 50S ribosomal protein L1 [Fluoribacter dumoffii Tex-KL]
Length = 231
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 76/171 (44%), Gaps = 23/171 (13%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A +Q E A + +D G +VG D I+ G + F VI P D MRI G L
Sbjct: 75 VAVFAQGENATKAKDAGADIVGFEDLADKIKGGAMD---FDVVIATP----DAMRIVGQL 127
Query: 221 ------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+ +P K T+ ++ K ++G ++Y K+ G +G++D +
Sbjct: 128 GQVLGPRGLMPNPKVGTVTTNVEAAVKDAKSGQVRYRTDKN------GIIHCTVGKVDFT 181
Query: 274 QEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGL 324
E + +N+ ++ D+ KP S ++ +I L + P +D+S +
Sbjct: 182 VEDIIENIVALINDLKKAKPTS--SKGQYLKKISLSTTMGP-GIAIDISSI 229
>gi|451947639|ref|YP_007468234.1| ribosomal protein L1 [Desulfocapsa sulfexigens DSM 10523]
gi|451906987|gb|AGF78581.1| ribosomal protein L1 [Desulfocapsa sulfexigens DSM 10523]
Length = 234
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G++ ++ F ++ + + ++ G VG D ++ I+ G + F + P ++ +
Sbjct: 70 GKETRVLVF-AKGDKETEAREAGADFVGGDDLVEKIKEGWLE---FDKTVATPDMMGTVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
+I +L R +P K T+ DL + + +++G K D + G IG+
Sbjct: 126 KIGRVLGPRNLMPNAKLGTVTFDLAKVIQDIKSG-----KVDFRVDKTGIVHAGIGKCSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
+E+L DNLK + + +KP S
Sbjct: 181 GEEKLCDNLKTFVEKVIQLKPSS 203
>gi|329943039|ref|ZP_08291813.1| ribosomal protein L1 [Chlamydophila psittaci Cal10]
gi|332287622|ref|YP_004422523.1| 50S ribosomal protein L1 [Chlamydophila psittaci 6BC]
gi|384450779|ref|YP_005663379.1| 50S ribosomal protein L1 [Chlamydophila psittaci 6BC]
gi|384451774|ref|YP_005664372.1| 50S ribosomal protein L1 [Chlamydophila psittaci 01DC11]
gi|384452748|ref|YP_005665345.1| 50S ribosomal protein L1 [Chlamydophila psittaci 08DC60]
gi|384453727|ref|YP_005666323.1| 50S ribosomal protein L1 [Chlamydophila psittaci C19/98]
gi|384454706|ref|YP_005667301.1| 50S ribosomal protein L1 [Chlamydophila psittaci 02DC15]
gi|392376852|ref|YP_004064630.1| putative 50S ribosomal protein L1 [Chlamydophila psittaci RD1]
gi|406592578|ref|YP_006739758.1| 50S ribosomal protein L1 [Chlamydia psittaci CP3]
gi|406594567|ref|YP_006741858.1| 50S ribosomal protein L1 [Chlamydia psittaci MN]
gi|407454251|ref|YP_006733359.1| 50S ribosomal protein L1 [Chlamydia psittaci 84/55]
gi|407456938|ref|YP_006735511.1| 50S ribosomal protein L1 [Chlamydia psittaci VS225]
gi|407458259|ref|YP_006736564.1| 50S ribosomal protein L1 [Chlamydia psittaci WS/RT/E30]
gi|407459511|ref|YP_006737614.1| 50S ribosomal protein L1 [Chlamydia psittaci M56]
gi|407460883|ref|YP_006738658.1| 50S ribosomal protein L1 [Chlamydia psittaci WC]
gi|410858635|ref|YP_006974575.1| putative 50S ribosomal protein L1 [Chlamydia psittaci 01DC12]
gi|449071338|ref|YP_007438418.1| 50S ribosomal protein L1 [Chlamydophila psittaci Mat116]
gi|313848195|emb|CBY17196.1| putative 50S ribosomal protein L1 [Chlamydophila psittaci RD1]
gi|325506456|gb|ADZ18094.1| 50S ribosomal protein L1 [Chlamydophila psittaci 6BC]
gi|328814586|gb|EGF84576.1| ribosomal protein L1 [Chlamydophila psittaci Cal10]
gi|328914873|gb|AEB55706.1| ribosomal protein L1 [Chlamydophila psittaci 6BC]
gi|334692508|gb|AEG85727.1| 50S ribosomal protein L1 [Chlamydophila psittaci C19/98]
gi|334693484|gb|AEG86702.1| 50S ribosomal protein L1 [Chlamydophila psittaci 01DC11]
gi|334694463|gb|AEG87680.1| 50S ribosomal protein L1 [Chlamydophila psittaci 02DC15]
gi|334695437|gb|AEG88653.1| 50S ribosomal protein L1 [Chlamydophila psittaci 08DC60]
gi|405781010|gb|AFS19760.1| ribosomal protein L1 [Chlamydia psittaci 84/55]
gi|405782999|gb|AFS21747.1| ribosomal protein L1 [Chlamydia psittaci MN]
gi|405784199|gb|AFS22946.1| ribosomal protein L1 [Chlamydia psittaci VS225]
gi|405785283|gb|AFS24029.1| ribosomal protein L1 [Chlamydia psittaci WS/RT/E30]
gi|405786254|gb|AFS24999.1| ribosomal protein L1 [Chlamydia psittaci M56]
gi|405787124|gb|AFS25868.1| ribosomal protein L1 [Chlamydia psittaci WC]
gi|405788450|gb|AFS27193.1| ribosomal protein L1 [Chlamydia psittaci CP3]
gi|410811530|emb|CCO02183.1| putative 50S ribosomal protein L1 [Chlamydia psittaci 01DC12]
gi|449039846|gb|AGE75270.1| 50S ribosomal protein L1 [Chlamydophila psittaci Mat116]
Length = 232
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ I+ F + E A + D G VG D ++ I+ G V F + P ++ ++
Sbjct: 70 GKTLKILVFAA-GEKAKEALDAGADFVGSDDLVEKIKGGWVD---FDVAVATPDMMREVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
++ +L R +PT K+ T+ D+ L+ G K K D G + +G+L
Sbjct: 126 KLGKVLGPRNLMPTPKAGTVTTDVTKTIAELRKG-KIEFKADRA----GVCNAGVGKLSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
L++N++ + + + KPP+
Sbjct: 181 DGHLLKENIEALCSALIKAKPPA 203
>gi|78358033|ref|YP_389482.1| 50S ribosomal protein L1 [Desulfovibrio alaskensis G20]
gi|91207353|sp|Q30X09.1|RL1_DESDG RecName: Full=50S ribosomal protein L1
gi|78220438|gb|ABB39787.1| ribosomal protein L1 [Desulfovibrio alaskensis G20]
Length = 235
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 70/144 (48%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ + FC + E A+ ++ G +VG D ++ ++ G++ F I P ++A +
Sbjct: 70 GKTVRVAVFC-KGEKQAEAREAGADIVGAEDLVEQVKGGMLD---FDSAIATPDVMALVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
+I +L R +P K+ T+ D+ ++ G +++ + K G +G++
Sbjct: 126 QIGRVLGPRGLMPNAKTGTVTFDVAKAVSEVKAGRVEFKVDKA------GVLHAPLGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
+++ +NLK +L + +KP S
Sbjct: 180 FGPQKIAENLKALLDTVQRLKPSS 203
>gi|323344617|ref|ZP_08084841.1| 50S ribosomal protein L1 [Prevotella oralis ATCC 33269]
gi|323093887|gb|EFZ36464.1| 50S ribosomal protein L1 [Prevotella oralis ATCC 33269]
Length = 230
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 71/149 (47%), Gaps = 23/149 (15%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNPK 208
G+ ++ C+ + AA ++ G VG + ++ I+ G ++TMP+ C K
Sbjct: 70 GKVTRVLCLCTPDQEAAA-KEAGADYVGLDEYVEKIKGGWTDIDVIITMPS-----CMGK 123
Query: 209 I--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
+ L ++ RGL+ P KS T+ +D+ K ++ G K D + G
Sbjct: 124 LGPLGRVLGPRGLM----PNPKSGTVTMDVAKAVKEVKQG-----KIDFKVDKAGIIHTS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ M+ EQ+ N K ++ ++ +KP +
Sbjct: 175 IGKVSMTAEQIYGNAKEFISTVTKLKPAA 203
>gi|319957696|ref|YP_004168959.1| 50S ribosomal protein L1 [Nitratifractor salsuginis DSM 16511]
gi|319420100|gb|ADV47210.1| LSU ribosomal protein L1P [Nitratifractor salsuginis DSM 16511]
Length = 234
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 106/247 (42%), Gaps = 32/247 (12%)
Query: 86 YLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDP--WT 143
L+K K + + +EA+ +++ L A TVEI+ + +DP
Sbjct: 12 LLEKIDKNKAYGVEEAVKTVKD--------LKSAKFDETVEIAMNLN------VDPRHAD 57
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
++ HG +++ +A ++ + + + G LVG + I+ I+ G + F
Sbjct: 58 QMIRGSVVLPHGTGKNVRVAVFAKGDKVDEAKAAGADLVGSDELIEQIQNGNID---FDI 114
Query: 203 VICNPKILADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQD 259
VI P ++ L ++ +L K +P K+ T+ +D+ K + G + + + K
Sbjct: 115 VIATPDMMGVLGKVARILGPKGLMPNPKTGTVTMDVAQAVKNAKGGQVNFRVDKK----- 169
Query: 260 FGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKL 319
G IG+ +++L +NL + I+ KP S +I L SP KL
Sbjct: 170 -GNMHAGIGKASFGEKELIENLTAFVEKINRAKPAS--AKGRYIQNAALSLTMSPS-VKL 225
Query: 320 DLSGLIE 326
D + L+E
Sbjct: 226 DTNELME 232
>gi|444380169|ref|ZP_21179333.1| LSU ribosomal protein L1p (L10Ae) [Enterovibrio sp. AK16]
gi|443675792|gb|ELT82509.1| LSU ribosomal protein L1p (L10Ae) [Enterovibrio sp. AK16]
Length = 234
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G +VG D + +++G + F VI +P D
Sbjct: 67 HGTGRDIRVAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++D ++L+ NL+ +L + KP S
Sbjct: 174 TIGKVDFDADKLKGNLEALLVALKKAKPSS 203
>gi|387772199|ref|ZP_10128156.1| ribosomal protein L1 [Haemophilus parahaemolyticus HK385]
gi|386907643|gb|EIJ72349.1| ribosomal protein L1 [Haemophilus parahaemolyticus HK385]
Length = 229
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R+ +A +Q A + G LVG D + +++G + F VI +P D
Sbjct: 67 HGTGRTARVAVFTQGANAEAAKAAGADLVGMEDLAEQVKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S+EQL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSEEQLKENLQALLAALTKAKPTT 203
>gi|350547122|ref|ZP_08916461.1| 50S ribosomal protein L1 [Mycoplasma iowae 695]
gi|349503345|gb|EGZ30949.1| 50S ribosomal protein L1 [Mycoplasma iowae 695]
Length = 459
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 12/123 (9%)
Query: 176 MGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLG 233
+GV GD + I+ I +G + F +I PK++ L ++ +L R +P K +
Sbjct: 84 LGVDFAGDKEKIEEISKGWLG---FDLIITTPKMMPALSKLGKILGTRGLMPNPKIGNVT 140
Query: 234 VDLIGIAKRLQTGI-KYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMK 292
DL + + GI +Y + +G +GR+D ++ +N+K +L + + K
Sbjct: 141 TDLPKTIAQFKAGIDEY------RTDQYGNIHMKVGRVDADDAKVVENIKFLLDFLVSKK 194
Query: 293 PPS 295
P S
Sbjct: 195 PAS 197
>gi|227549796|ref|ZP_03979845.1| 50S ribosomal protein L1 [Corynebacterium lipophiloflavum DSM
44291]
gi|227078051|gb|EEI16014.1| 50S ribosomal protein L1 [Corynebacterium lipophiloflavum DSM
44291]
Length = 236
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 72/158 (45%), Gaps = 17/158 (10%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V S +G +++ +A ++ E A + ++ G +VG I+ I G + F
Sbjct: 57 QLVRGTVSLPNGTGKTVRVAVFAEGENATKAEEAGADIVGTDTLIEQINAGQLD---FDV 113
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQD 259
I P +A + R+ +L R +P K+ T+ D+ ++ G I + + K
Sbjct: 114 AIATPDQMAKVGRVARVLGPRGLMPNPKTGTVTPDVAKAIADVKGGKIAFRVDK------ 167
Query: 260 FGYSDFH--IGRLDMSQEQLEDNLKRILADISTMKPPS 295
S+ H IG+ + EQL +N +L ++ +KP S
Sbjct: 168 --ASNLHALIGKASFTPEQLAENYGALLDEVIRLKPAS 203
>gi|30468131|ref|NP_849018.1| ribosomal protein L1 [Cyanidioschyzon merolae strain 10D]
gi|33301436|sp|Q85G11.1|RK1_CYAME RecName: Full=50S ribosomal protein L1, chloroplastic
gi|30409231|dbj|BAC76180.1| 50S ribosomal protein L1 (chloroplast) [Cyanidioschyzon merolae
strain 10D]
Length = 224
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 65/144 (45%), Gaps = 17/144 (11%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG ++I IA ++ + + G LVG D I + ++ F +I P ++
Sbjct: 65 HGTGKAIRIAVITKQSSHIE----GADLVGSDDLCAQIAQSIIN---FDCLIATPDMMPT 117
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
L ++ +L R +P+ KS T+ ++ + + G I+Y K G GR
Sbjct: 118 LAKLGKILGPRGLMPSPKSGTVTTNVAEAIQAFRRGQIEYRTDKT------GIVHLAFGR 171
Query: 270 LDMSQEQLEDNLKRILADISTMKP 293
+D +++ L DNL I + T KP
Sbjct: 172 MDFNEQHLYDNLVAIKESVETNKP 195
>gi|386388930|ref|ZP_10073772.1| ribosomal protein L1 [Haemophilus paraphrohaemolyticus HK411]
gi|385696664|gb|EIG27135.1| ribosomal protein L1 [Haemophilus paraphrohaemolyticus HK411]
Length = 229
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R+ +A +Q A + G LVG D + +++G + F VI +P D
Sbjct: 67 HGTGRTARVAVFTQGANAEAAKAAGADLVGMEDLAEQVKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S+EQL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSEEQLKENLQALLAALTKAKPTT 203
>gi|387813006|ref|YP_005428487.1| 50S ribosomal protein L1 [Marinobacter hydrocarbonoclasticus ATCC
49840]
gi|381338017|emb|CCG94064.1| 50S ribosomal subunit protein L1, regulates synthesis of L1 and L11
[Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 232
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 21/160 (13%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V HG +++ +A +Q A + G +VG D +++G + F
Sbjct: 58 QVVRSSTVLPHGTGKTVRVAVFTQGANAEKATAAGADVVGMDDLADEVKKGNMD---FDV 114
Query: 203 VICNPKILADLMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDP 255
VI P D MR+ G L + +P K T+ D+ K + G ++Y K+
Sbjct: 115 VIATP----DAMRVVGQLGQILGPRGLMPNPKVGTVTADVETAVKNAKAGQVRYRTDKN- 169
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
G +G ++ S + +++NL+ ++AD+ KP S
Sbjct: 170 -----GIIHAPLGNVEFSAQNIKENLEALVADLKKAKPAS 204
>gi|242129249|gb|ACS83698.1| ribosomal protein L1 [uncultured bacterium AOCefta2]
Length = 238
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/149 (21%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S HG +++ +A ++ E A + + G LVG D + + G F I P +
Sbjct: 64 SLPHGTGKTVRVAVFAKGEKALEAEKAGAELVGAEDLVAKVAGGFTE---FDAAISTPDM 120
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
+ + ++ +L R +P K+ T+ +D+ ++ G +++ + K G
Sbjct: 121 MGQVGKLGKVLGPRGLMPNPKTGTVTMDVTKAIAEIKGGKVEFRVDKT------GNVHVP 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G++ + EQL +N + +L + KP +
Sbjct: 175 VGKIQFTPEQLAENTQVMLDALHRAKPAA 203
>gi|262273342|ref|ZP_06051157.1| LSU ribosomal protein L1p (L10Ae) [Grimontia hollisae CIP 101886]
gi|262222715|gb|EEY74025.1| LSU ribosomal protein L1p (L10Ae) [Grimontia hollisae CIP 101886]
Length = 234
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G +VG D + +++G + F VI +P D
Sbjct: 67 HGTGRDIRVAVFTQGANAEAAKEAGADVVGMEDLAEQVKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++D ++L+ NL+ +L + KP S
Sbjct: 174 TIGKVDFDADKLKGNLEALLVALKKAKPSS 203
>gi|270160339|ref|ZP_06188992.1| ribosomal protein L1 [Legionella longbeachae D-4968]
gi|289163820|ref|YP_003453958.1| 50S ribosomal protein L1 [Legionella longbeachae NSW150]
gi|269987151|gb|EEZ93409.1| ribosomal protein L1 [Legionella longbeachae D-4968]
gi|288856993|emb|CBJ10807.1| 50S ribosomal protein L1 [Legionella longbeachae NSW150]
Length = 231
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A +Q + A + +D G +VG D + I+ G + F VI P D MRI G L
Sbjct: 75 VAVFAQGDNATKAKDAGADIVGFEDLAEKIKGGAMD---FDVVIATP----DAMRIVGQL 127
Query: 221 ------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+ +P K T+ ++ K ++G ++Y K+ G +G++D +
Sbjct: 128 GQVLGPRGLMPNPKVGTVTTNVEAAVKDAKSGQVRYRTDKN------GIIHCTVGKVDFA 181
Query: 274 QEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGL 324
E + +N+ ++ D+ KP S ++ +I L + P +D+S +
Sbjct: 182 AEDIIENIVALINDLKKAKPSS--SKGQYLKKISLSTTMGPG-LSIDISSI 229
>gi|120553642|ref|YP_957993.1| 50S ribosomal protein L1 [Marinobacter aquaeolei VT8]
gi|160166247|sp|A1TYI7.1|RL1_MARAV RecName: Full=50S ribosomal protein L1
gi|120323491|gb|ABM17806.1| LSU ribosomal protein L1P [Marinobacter aquaeolei VT8]
Length = 232
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 70/160 (43%), Gaps = 21/160 (13%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V HG +++ +A +Q A + G +VG D +++G + F
Sbjct: 58 QVVRSSTVLPHGTGKTVRVAVFTQGANAEKATAAGADVVGMDDLADEVKKGNMD---FDV 114
Query: 203 VICNPKILADLMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDP 255
VI P D MR+ G L + +P K T+ D+ K + G ++Y K+
Sbjct: 115 VIATP----DAMRVVGQLGQILGPRGLMPNPKVGTVTADVETAVKNAKAGQVRYRTDKN- 169
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
G +G ++ S + +++NL+ ++AD+ KP S
Sbjct: 170 -----GIIHAPLGNVEFSAQNIKENLEALVADLKKAKPAS 204
>gi|256831817|ref|YP_003160544.1| 50S ribosomal protein L1 [Jonesia denitrificans DSM 20603]
gi|256685348|gb|ACV08241.1| ribosomal protein L1 [Jonesia denitrificans DSM 20603]
Length = 236
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 78/168 (46%), Gaps = 21/168 (12%)
Query: 154 HGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG ++ ++ F + + A Q ++ G +VG + I+ + G F + P ++
Sbjct: 67 HGTGKTARVLVFAT-GDRAEQAREAGADIVGGDELIQQVADGFTD---FDAAVATPDLMG 122
Query: 212 DLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH-- 266
+ R+ +L R +P K+ T+ +D+ ++ G I++ + K +S+ H
Sbjct: 123 KVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVNDIKGGKIEFRVDK--------HSNLHFI 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
IG+ S+EQL +N + ++ +KP S +IT+ L + P
Sbjct: 175 IGKASFSEEQLVENYAAAIDEVLRLKPSS--SKGRYITKATLTTTMGP 220
>gi|340346452|ref|ZP_08669577.1| 50S ribosomal protein L1 [Prevotella dentalis DSM 3688]
gi|433651245|ref|YP_007277624.1| ribosomal protein L1 [Prevotella dentalis DSM 3688]
gi|339611909|gb|EGQ16726.1| 50S ribosomal protein L1 [Prevotella dentalis DSM 3688]
gi|433301778|gb|AGB27594.1| ribosomal protein L1 [Prevotella dentalis DSM 3688]
Length = 230
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 23/149 (15%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNPK 208
G+ ++A C+ + AA ++ G VG + I I+ G ++TMP+ C K
Sbjct: 70 GKTVRVLALCTPDQEAAA-KEAGADYVGLDEYIDKIKGGWLDIDVIITMPS-----CMGK 123
Query: 209 I--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
+ L + RGL+ P KS T+ +D+ K ++ G K D + G
Sbjct: 124 VGPLGRFLGPRGLM----PNPKSGTVTMDVAKAVKEVKQG-----KIDFKVDKAGIIHSS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ M+ EQ+ N K + I +KP +
Sbjct: 175 IGKVSMTTEQIYGNAKEFINTIIRLKPAA 203
>gi|392969342|ref|ZP_10334757.1| ribosomal protein L1 [Fibrisoma limi BUZ 3]
gi|387841536|emb|CCH56815.1| ribosomal protein L1 [Fibrisoma limi BUZ 3]
Length = 232
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 79/168 (47%), Gaps = 15/168 (8%)
Query: 151 SFDHGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
+ HG +++ + C+ + + ++ G VG D I+ IE+G + +I P
Sbjct: 64 TLPHGTGKTVRVLVLCTPDK-ENEAKEAGADYVGLDDYIQKIEQGWTDV---DVIITMPN 119
Query: 209 ILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
++A + R+ +L R +P KS T+ +++ + ++ G K D + G
Sbjct: 120 VMAKVGRLGRVLGPRGLMPNPKSGTVTLEVGKAVREVKAG-----KIDFKVDKTGIIHTS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
IG++ + ++L +N + ++A + +KP S ++ I L S SP
Sbjct: 175 IGKVSFTPDKLAENAQEVIATLMRLKPSS--AKGTYVKSIYLSSTMSP 220
>gi|345881552|ref|ZP_08833070.1| 50S ribosomal protein L1 [Prevotella oulorum F0390]
gi|343919517|gb|EGV30264.1| 50S ribosomal protein L1 [Prevotella oulorum F0390]
Length = 230
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 70/149 (46%), Gaps = 23/149 (15%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNPK 208
G+ ++A C+ + AA ++ G VG + ++ I+ G ++TMP+ C K
Sbjct: 70 GKTVRVLALCTPDQEAAA-KEAGADYVGLDEYVEKIKGGWTDIDVIITMPS-----CMGK 123
Query: 209 I--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
+ L ++ RGL+ P KS T+ +D+ K ++ G K D + G
Sbjct: 124 LGPLGRVLGPRGLM----PNPKSGTVTMDVAKAVKEVKQG-----KIDFKVDKAGIIHTS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ M+ EQ+ N K + + +KP S
Sbjct: 175 IGKISMTPEQILGNAKEFIQTVIKLKPSS 203
>gi|32034814|ref|ZP_00134926.1| COG0081: Ribosomal protein L1 [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126209183|ref|YP_001054408.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|190151048|ref|YP_001969573.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|303249961|ref|ZP_07336163.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|303253133|ref|ZP_07339282.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|307246645|ref|ZP_07528716.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|307248772|ref|ZP_07530785.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|307251015|ref|ZP_07532940.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|307253391|ref|ZP_07535262.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|307255630|ref|ZP_07537435.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|307257806|ref|ZP_07539563.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|307260081|ref|ZP_07541793.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|307262210|ref|ZP_07543860.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|307264411|ref|ZP_07545997.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|407693498|ref|YP_006818287.1| 50S ribosomal protein L1 [Actinobacillus suis H91-0380]
gi|160165587|sp|A3N317.1|RL1_ACTP2 RecName: Full=50S ribosomal protein L1
gi|226724860|sp|B3GYU5.1|RL1_ACTP7 RecName: Full=50S ribosomal protein L1
gi|126097975|gb|ABN74803.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar
5b str. L20]
gi|189916179|gb|ACE62431.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar 7
str. AP76]
gi|302647815|gb|EFL78022.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar 2
str. 4226]
gi|302651024|gb|EFL81178.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306852517|gb|EFM84751.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar 1
str. 4074]
gi|306854699|gb|EFM86889.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar 2
str. S1536]
gi|306856955|gb|EFM89086.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar 4
str. M62]
gi|306859070|gb|EFM91112.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar 6
str. Femo]
gi|306861479|gb|EFM93468.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar 9
str. CVJ13261]
gi|306863712|gb|EFM95638.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306865917|gb|EFM97793.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306868084|gb|EFM99910.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|306870227|gb|EFN01985.1| 50S ribosomal protein L1 [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|407389555|gb|AFU20048.1| 50S ribosomal protein L1 [Actinobacillus suis H91-0380]
Length = 229
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 21/148 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R+ +A +Q A + G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGRTARVAVFTQGANAEAAKAAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKP 293
IG+ D + EQL+DNL +LA ++ KP
Sbjct: 174 TIGKADFAPEQLKDNLVALLAALNKAKP 201
>gi|282878710|ref|ZP_06287478.1| ribosomal protein L1 [Prevotella buccalis ATCC 35310]
gi|281299101|gb|EFA91502.1| ribosomal protein L1 [Prevotella buccalis ATCC 35310]
Length = 230
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 70/153 (45%), Gaps = 25/153 (16%)
Query: 151 SFDHGEDR--SIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQF 202
+ HG + ++ C+ + AA ++ G VG + I+ I+ G ++TMP+
Sbjct: 64 TLPHGTGKVTRVLCLCTPDQEAAA-KEAGADYVGLDEYIEKIKGGWTDVDVIITMPS--- 119
Query: 203 VICNPKI--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
C K+ L ++ RGL+ P KS T+ +D+ ++ G K D +
Sbjct: 120 --CMGKVGPLGRVLGPRGLM----PNPKSGTVTMDVAKAVSEIKKG-----KIDFKVDKA 168
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
G IG++ MS EQ+ N K ++ + +KP
Sbjct: 169 GIIHTSIGKVSMSAEQIYGNAKEFISTVIKLKP 201
>gi|302829643|ref|XP_002946388.1| plastid/chloroplast ribosomal protein L1 [Volvox carteri f.
nagariensis]
gi|300268134|gb|EFJ52315.1| plastid/chloroplast ribosomal protein L1 [Volvox carteri f.
nagariensis]
Length = 302
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 63/138 (45%), Gaps = 16/138 (11%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A +Q++ ++ G +VG D I+ I G + F +I P ++ + ++ +L
Sbjct: 140 VAVLTQNDNLRLAKEAGADVVGADDLIEKISGGFME---FDKLIATPDMMPKVAKLGRVL 196
Query: 221 KKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHI--GRLDMSQE 275
R +P K+ T+ D+ G K + G ++Y + K + H+ GR D ++
Sbjct: 197 GPRGLMPNPKAGTVTTDVAGTVKDFKGGKVEYRLDK--------TGNLHVLFGRADFKED 248
Query: 276 QLEDNLKRILADISTMKP 293
L NLK + I KP
Sbjct: 249 DLIFNLKAVQESIDANKP 266
>gi|395241975|ref|ZP_10418975.1| 50S ribosomal protein L1 [Lactobacillus pasteurii CRBIP 24.76]
gi|394480723|emb|CCI85215.1| 50S ribosomal protein L1 [Lactobacillus pasteurii CRBIP 24.76]
Length = 230
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 98/222 (44%), Gaps = 38/222 (17%)
Query: 86 YLQKDYKL---RIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPW 142
YL+ K+ +++ EA+ ++ET + A A+VE+S +DP
Sbjct: 8 YLEAAKKVDSTKLYTIDEAMKLVKETSY--------ANFDASVEVSYNLS------VDPK 53
Query: 143 THIVEVEHSF----DHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMP 198
++ S G+ +I F + A Q + G VG + ++ ++ G +
Sbjct: 54 QADQQIRGSLVLPNGTGKTSKVIVFA-EGPQAEQAKAAGADEVGSDELVEKVQNGYLD-- 110
Query: 199 TFQFVICNPKILADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDP 255
F V+ P ++A + R+ +L K +P K+ T+ +D+ K ++ G ++Y + +
Sbjct: 111 -FDVVVATPMMMAKVGRLGRVLGPKGLMPNPKTGTVTMDVEKAVKNVKAGQVEYRVDRQ- 168
Query: 256 QEQDFGYSDFH--IGRLDMSQEQLEDNLKRILADISTMKPPS 295
+ H IG++ ++EQL +N K + I +P +
Sbjct: 169 -------AAIHAAIGKVSFTEEQLAENFKALRDVIVRARPAA 203
>gi|301753385|ref|XP_002912531.1| PREDICTED: 39S ribosomal protein L1, mitochondrial-like [Ailuropoda
melanoleuca]
Length = 328
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 65/290 (22%), Positives = 128/290 (44%), Gaps = 23/290 (7%)
Query: 24 VSFHTATPYYAARKGTRARKEGKKVRTEIKKVAWTPDSKKKKDIYASRKVDESNLTYPED 83
V H + ++AA K + KK S +KKD K PED
Sbjct: 37 VYVHVPSRHFAA---------ATKPGKKTKKGVKDKASDEKKDEIEKIKSYSYMEGEPED 87
Query: 84 DIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWT 143
D+YL++ Y +I++ ++A+ +++ N P+ G ++++ K K ++P+
Sbjct: 88 DVYLKRLYPRQIYEVEKAIQLLKKFQALDFTN-PKQ--GVYLDLTLDMALGKKKKVEPFA 144
Query: 144 HIVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFV 203
+ + F E + F ++ G A G ++ I+ I + F
Sbjct: 145 SALRFPYPFV-SEINKVAVFTGNASEIKIAEENGAAFAGGTNLIQKIWDDEIQS---DFY 200
Query: 204 ICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYS 263
+ P+I+ +L ++ LKKR P L ++G D+ + + +TG + +K D + ++F
Sbjct: 201 VAVPEIMPELNPLKKKLKKRFPKLTRNSIGRDIPKMLELFKTG--HEIKVDEERENF--L 256
Query: 264 DFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
+ I LDM +Q+ NL+ +++++ +P S F+ R L + S
Sbjct: 257 ETKIATLDMPSDQIAANLQAVISEVCKHRPLSLG---PFVVRAFLRTSTS 303
>gi|444346428|ref|ZP_21154395.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
gi|443541769|gb|ELT52175.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype c str. AAS4A]
Length = 229
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A + G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGREVRVAVFTQGANAEAAKAAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S++QL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSEDQLKENLQALLAALTKAKPTT 203
>gi|292492411|ref|YP_003527850.1| 50S ribosomal protein L1 [Nitrosococcus halophilus Nc4]
gi|291581006|gb|ADE15463.1| ribosomal protein L1 [Nitrosococcus halophilus Nc4]
Length = 231
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 90/210 (42%), Gaps = 30/210 (14%)
Query: 102 LAAIRETHHPT-MYNLPRAFIGATVEISTTTHQKKVKY-----MDPWT--HIVEVEHSFD 153
LA IRE P +Y++ A I E +T ++ V +DP +V
Sbjct: 8 LAGIREKLEPGKVYSVEEA-ISLLKEAATAKFEESVDAAVNLGVDPRKSDQVVRGSTVLP 66
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
+G +++ +A +Q A ++ G +VG D + ++ G F VI +P D
Sbjct: 67 NGIGKTVRVAVFTQGANADAAKEAGADVVGLEDLAEKVKAG---ETDFDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ D++G + + G ++Y K G
Sbjct: 120 AMRVVGQLGPILGPRGLMPNPKVGTVTTDVVGAVTKAKAGQVRYRTDK------AGIIHC 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ L+ NL+ ++ D+ +KP S
Sbjct: 174 SIGKVSFEVGALKQNLQALVEDLRKLKPAS 203
>gi|237840075|ref|XP_002369335.1| 50S ribosomal protein L1, putative [Toxoplasma gondii ME49]
gi|211966999|gb|EEB02195.1| 50S ribosomal protein L1, putative [Toxoplasma gondii ME49]
gi|221503959|gb|EEE29636.1| 50S ribosomal protein L1p, putative [Toxoplasma gondii VEG]
Length = 431
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 13/170 (7%)
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTM-PTFQFV 203
+ ++H G + + FC E A L +G G + I +G V T
Sbjct: 200 VCTLQHGV--GSNVRLAVFCPDEEAPAMLA-LGADYAGVDALLPRIAKGWVGFDKTLAVA 256
Query: 204 ICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYS 263
PK+L + R+ G +K +P+ KS T+ +L + ++ G + E D G
Sbjct: 257 SVMPKLL-KVARVLGP-RKLMPSPKSGTVVTNLSEAVRAVKRGETVEFRA---EGDSGEV 311
Query: 264 DFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFIT----RILLW 309
+GR D QL +N+K ++ ++ +P S +D T R +W
Sbjct: 312 RIVVGRQDFEASQLLENIKCVVKEVLKARPRSSGARQDEATQAFARSFVW 361
>gi|333989304|ref|YP_004521918.1| 50S ribosomal protein L1 [Mycobacterium sp. JDM601]
gi|333485272|gb|AEF34664.1| 50S ribosomal protein L1 RplA [Mycobacterium sp. JDM601]
Length = 235
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 13/164 (7%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG ++ +A + E A Q G +VG D I+ I+ G + F I P +A
Sbjct: 67 HGTGKTARVAVFAVGEKAEQATAAGADVVGSDDLIEKIQGGFLD---FDAAIATPDQMAK 123
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ RI +L R +P K+ T+ D+ ++ G K + + D Q F IG+
Sbjct: 124 VGRIARVLGPRGLMPNPKTGTVTPDVAKAVSDIKGG-KINFRVDKQAN----LHFVIGKA 178
Query: 271 DMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+ +L +N L ++ +KP S ++ +I++ + P
Sbjct: 179 SFDESKLAENYGAALDEVLRLKPSS--SKGRYLKKIVISTTTGP 220
>gi|317485866|ref|ZP_07944728.1| ribosomal protein L1 [Bilophila wadsworthia 3_1_6]
gi|345887521|ref|ZP_08838698.1| 50S ribosomal protein L1 [Bilophila sp. 4_1_30]
gi|316922881|gb|EFV44105.1| ribosomal protein L1 [Bilophila wadsworthia 3_1_6]
gi|345041731|gb|EGW45863.1| 50S ribosomal protein L1 [Bilophila sp. 4_1_30]
Length = 234
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 89/194 (45%), Gaps = 18/194 (9%)
Query: 137 KYMDPWTHIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLV 195
KY D +V S HG +++ +A + E A+ + G + G + + I+ G +
Sbjct: 52 KYSD---QMVRGAVSLPHGLGKTVRVAVFCKGEKEAEARAAGADIAGAEELVAKIKEGWL 108
Query: 196 TMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKK 253
F + P ++A + ++ +L R +P K+ T+ D+ K L+ G +
Sbjct: 109 E---FDAAVATPDVMALVGQVGRVLGPRGLMPNAKTGTVTFDVATAVKELKAG-----RV 160
Query: 254 DPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
D + G +G++ E++ NLK ++ ++ +KP + ++ + + +
Sbjct: 161 DFKVDKAGVLHAPLGKVSFGPEKILGNLKALVETVNRLKPSA--AKGTYMKNMAVSTTMG 218
Query: 314 PEKFKLDLSGLIEK 327
P FK+D++ LI+K
Sbjct: 219 P-GFKVDMT-LIKK 230
>gi|212702087|ref|ZP_03310215.1| hypothetical protein DESPIG_00094 [Desulfovibrio piger ATCC 29098]
gi|212674492|gb|EEB34975.1| ribosomal protein L1 [Desulfovibrio piger ATCC 29098]
Length = 246
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/189 (21%), Positives = 82/189 (43%), Gaps = 17/189 (8%)
Query: 137 KYMDPWTHIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLV 195
KY D +V + HG +++ +A + E A+ G VG D + ++ G +
Sbjct: 64 KYSD---QMVRGAVTLPHGLGKTVRVAVFCKGEKQAEATAAGADFVGAEDLVAKVKEGWL 120
Query: 196 TMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKK 253
F + P ++A + +I LL R +P K+ ++ D+ L+ G +
Sbjct: 121 D---FDAAVATPDVMALVGQIGRLLGPRGLMPNAKTGSVTFDVTKAVNELKAG-----RV 172
Query: 254 DPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
D + G +G++ E++ NLK +L ++ +KP ++ + + +
Sbjct: 173 DFKVDKAGVLHAPLGKVSFGPEKILGNLKALLETVNRLKPSG--AKGTYMLSMAVSTTMG 230
Query: 314 PEKFKLDLS 322
P FK+D+S
Sbjct: 231 P-GFKIDMS 238
>gi|312200031|ref|YP_004020092.1| 50S ribosomal protein L1 [Frankia sp. EuI1c]
gi|311231367|gb|ADP84222.1| ribosomal protein L1 [Frankia sp. EuI1c]
Length = 237
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 14/120 (11%)
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLI 237
+VG D + I+ G + F + P +A + RI +L R +P K+ T+ +D+
Sbjct: 93 IVGSDDLVARIQEGFLD---FDAAVATPDQMAKVGRIARILGPRGLMPNPKTGTVTLDVT 149
Query: 238 GIAKRLQTGIKYSMKKDPQEQDFGYSDFHI--GRLDMSQEQLEDNLKRILADISTMKPPS 295
+ K ++ G K + K D Q ++ HI G+ + S +QL +N L +I +KP +
Sbjct: 150 KVVKEIKGG-KINFKIDKQ------NNLHIVIGKTNFSAQQLVENYSTALDEIVRVKPSA 202
>gi|261866780|ref|YP_003254702.1| 50S ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|365966600|ref|YP_004948162.1| 50S ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|387121395|ref|YP_006287278.1| 50S ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|415764286|ref|ZP_11482343.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans D17P-3]
gi|415770115|ref|ZP_11484730.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans D17P-2]
gi|416034215|ref|ZP_11573274.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|416066476|ref|ZP_11582018.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|429733775|ref|ZP_19267830.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans Y4]
gi|444331338|ref|ZP_21148849.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
gi|444348709|ref|ZP_21156307.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
gi|261412112|gb|ACX81483.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans D11S-1]
gi|347998338|gb|EGY39268.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype a str. H5P1]
gi|348002746|gb|EGY43417.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype f str. D18P1]
gi|348654323|gb|EGY69957.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans D17P-3]
gi|348657148|gb|EGY74745.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans D17P-2]
gi|365745513|gb|AEW76418.1| 50S ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
ANH9381]
gi|385875887|gb|AFI87446.1| 50S ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|429154207|gb|EKX96950.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans Y4]
gi|443546377|gb|ELT56046.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype b str. S23A]
gi|443552570|gb|ELT59852.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype a str. A160]
Length = 229
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A + G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGREVRVAVFTQGANAEAAKAAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S++QL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSEDQLKENLQALLAALTKAKPTT 203
>gi|325288567|ref|YP_004264748.1| 50S ribosomal protein L1P [Syntrophobotulus glycolicus DSM 8271]
gi|324963968|gb|ADY54747.1| LSU ribosomal protein L1P [Syntrophobotulus glycolicus DSM 8271]
Length = 231
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL--KKRIPTLKSQTLGVDLI 237
VG D I+ I++G F + P ++ + R+ LL K +P K+ T+ VD+
Sbjct: 94 FVGAEDMIEKIQQGWFG---FDVAVATPDMMGLVGRLGRLLGPKGLMPNPKTGTVAVDVE 150
Query: 238 GIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSK 296
K ++ G I+Y K G IG++ S++QL DN K ++ADI P+
Sbjct: 151 KAVKEIKAGKIEYRADKA------GIVHAPIGKVSFSEDQLLDNYK-VIADIIARAKPAA 203
Query: 297 PEDEDFITRILLWSEPSP 314
+ + ++ + + S P
Sbjct: 204 AKGQ-YVRSVTVSSTMGP 220
>gi|218779771|ref|YP_002431089.1| 50S ribosomal protein L1 [Desulfatibacillum alkenivorans AK-01]
gi|226724900|sp|B8FEU4.1|RL1_DESAA RecName: Full=50S ribosomal protein L1
gi|218761155|gb|ACL03621.1| ribosomal protein L1 [Desulfatibacillum alkenivorans AK-01]
Length = 234
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D ++ F ++ E A+ ++ G VG+ D ++ I+ G + F I P ++ +
Sbjct: 70 GKDVRVLVF-AKGEKEAEAKEAGADFVGNDDLVEKIQGGWLD---FDKAIATPDMMGTVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
++ +L R +P K+ T+ D+ + L+ G K D + + G +G++
Sbjct: 126 KMGRILGPRGLMPNAKTGTVTFDVAKAVQELKAG-----KIDFRVERAGILHAPMGKVSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
E+L DN+ + +KP +
Sbjct: 181 GAEKLLDNISAFFETVQRLKPSA 203
>gi|416052741|ref|ZP_11578376.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
gi|347991533|gb|EGY32996.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype e str. SC1083]
Length = 229
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A + G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGREVRVAVFTQGANAEAAKAAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S++QL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSEDQLKENLQALLAALTKAKPTT 203
>gi|332666495|ref|YP_004449283.1| 50S ribosomal protein L1 [Haliscomenobacter hydrossis DSM 1100]
gi|332335309|gb|AEE52410.1| ribosomal protein L1 [Haliscomenobacter hydrossis DSM 1100]
Length = 230
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 72/162 (44%), Gaps = 13/162 (8%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ + + FC+ + + + G VG D I+ ++ G + +I P+ +A L
Sbjct: 70 GKTKRVAVFCTP-DKVEEAKAAGADYVGLEDLIQKVQEGWTDV---DVIIAMPQTMAALG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
++ +L R +P K+ T+ D+ ++ G K S + D G +GR+
Sbjct: 126 KVARILGPRGLMPNPKTGTVTTDIASAVSEVKKG-KISFRVD----KTGIIHASVGRVSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
S QL +N+ +L + MKP + ++ I L + SP
Sbjct: 181 SPAQLIENINELLHTLQRMKPST--AKGTYMKSITLATTMSP 220
>gi|330444703|ref|YP_004377689.1| 50S ribosomal protein L1 [Chlamydophila pecorum E58]
gi|328807813|gb|AEB41986.1| ribosomal protein L1 [Chlamydophila pecorum E58]
Length = 232
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ I+ F + E A + G VG + I+ I+ G + F + P ++ ++
Sbjct: 70 GKTLKILVFAA-GEKAKEAVAAGADFVGSDEIIEQIKNGWLD---FDVAVATPDMMREVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
++ +L R +PT K+ T+ VD++ L+ G K K D G + +G+L
Sbjct: 126 KLGKILGPRNLMPTPKAGTVTVDVVKAISELRKG-KIEFKADRA----GVCNAGVGKLSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
Q+++N++ + KPP+
Sbjct: 181 DSAQIKENIEAFCHALIKAKPPA 203
>gi|445063392|ref|ZP_21375601.1| 50S ribosomal protein L1 [Brachyspira hampsonii 30599]
gi|444505223|gb|ELV05776.1| 50S ribosomal protein L1 [Brachyspira hampsonii 30599]
Length = 233
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+++ ++ F +Q E A + + G VG D I ++ G F I P ++ ++
Sbjct: 72 GKEKRVVVF-AQGEKADEAKAAGAVEVGFEDLIDKVKGGYTD---FDVAISTPDLMKEVG 127
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L ++ +P K+ T+ +D+ K + G ++Y K+ G IG+
Sbjct: 128 KLGQILGRKGLMPNPKTGTVTLDIAQAVKSFKAGRMEYRADKN------GIVRMGIGKAS 181
Query: 272 MSQEQLEDNLKRILADISTMKP 293
M+ QL +N K +I KP
Sbjct: 182 MNASQLNENFKAFYDEILRKKP 203
>gi|418464757|ref|ZP_13035696.1| 50S ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
RhAA1]
gi|359756712|gb|EHK90869.1| 50S ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
RhAA1]
Length = 229
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A + G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGREVRVAVFTQGANAEAAKAAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S++QL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSEDQLKENLQALLAALTKAKPTT 203
>gi|148269605|ref|YP_001244065.1| 50S ribosomal protein L1 [Thermotoga petrophila RKU-1]
gi|281411677|ref|YP_003345756.1| 50S ribosomal protein L1 [Thermotoga naphthophila RKU-10]
gi|166219593|sp|A5IJW6.1|RL1_THEP1 RecName: Full=50S ribosomal protein L1
gi|147735149|gb|ABQ46489.1| LSU ribosomal protein L1P [Thermotoga petrophila RKU-1]
gi|281372780|gb|ADA66342.1| ribosomal protein L1 [Thermotoga naphthophila RKU-10]
Length = 233
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 133 QKKVKYMDPWTHI---VEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKG 189
Q + Y P HI V + H G++ ++ F ++ E A + + G VG D ++
Sbjct: 47 QTGIDYRKPEQHIRGTVVLPHG--TGKEVRVLVF-AKGEAAKEALEAGADYVGAEDLVEK 103
Query: 190 IER-GLVTMPTFQFVICNPKILADLMRIRGLLKK------RIPTLKSQTLGVDLIGIAKR 242
IE+ G + F I P D+MR+ G L K +P+ KS T+ ++ K
Sbjct: 104 IEKEGFLD---FDVAIATP----DMMRVIGRLGKILGPRGLMPSPKSGTVTQEVAEAVKE 156
Query: 243 LQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDF 302
+ G + ++ D G +G+ E+L++N+ + I MKP F
Sbjct: 157 FKKG-RIEVRTDKT----GNIHIPVGKRSFDNEKLKENIISAVRQIMQMKPAGV--KGQF 209
Query: 303 ITRILLWSEPSPEKFKLDLSGLIE 326
I + +L S P KL+L L++
Sbjct: 210 IKKAVLSSTMGP-GIKLNLQSLLK 232
>gi|27467219|ref|NP_763856.1| 50S ribosomal protein L1 [Staphylococcus epidermidis ATCC 12228]
gi|57866130|ref|YP_187775.1| 50S ribosomal protein L1 [Staphylococcus epidermidis RP62A]
gi|242241870|ref|ZP_04796315.1| 50S ribosomal protein L1 [Staphylococcus epidermidis W23144]
gi|251809955|ref|ZP_04824428.1| 50S ribosomal protein L1 [Staphylococcus epidermidis BCM-HMP0060]
gi|282875011|ref|ZP_06283886.1| ribosomal protein L1 [Staphylococcus epidermidis SK135]
gi|293367914|ref|ZP_06614552.1| 50S ribosomal protein L1 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|416127880|ref|ZP_11597145.1| ribosomal protein L1 [Staphylococcus epidermidis FRI909]
gi|417646119|ref|ZP_12295998.1| ribosomal protein L1 [Staphylococcus epidermidis VCU144]
gi|417657368|ref|ZP_12307033.1| ribosomal protein L1 [Staphylococcus epidermidis VCU028]
gi|417658266|ref|ZP_12307902.1| ribosomal protein L1 [Staphylococcus epidermidis VCU045]
gi|417910355|ref|ZP_12554077.1| ribosomal protein L1 [Staphylococcus epidermidis VCU037]
gi|417911454|ref|ZP_12555159.1| ribosomal protein L1 [Staphylococcus epidermidis VCU105]
gi|417914015|ref|ZP_12557670.1| ribosomal protein L1 [Staphylococcus epidermidis VCU109]
gi|418326346|ref|ZP_12937532.1| ribosomal protein L1 [Staphylococcus epidermidis VCU071]
gi|418328524|ref|ZP_12939635.1| ribosomal protein L1 [Staphylococcus epidermidis 14.1.R1.SE]
gi|418412978|ref|ZP_12986225.1| 50S ribosomal protein L1 [Staphylococcus epidermidis BVS058A4]
gi|418604267|ref|ZP_13167625.1| ribosomal protein L1 [Staphylococcus epidermidis VCU041]
gi|418609536|ref|ZP_13172678.1| ribosomal protein L1 [Staphylococcus epidermidis VCU065]
gi|418611906|ref|ZP_13174969.1| ribosomal protein L1 [Staphylococcus epidermidis VCU117]
gi|418614186|ref|ZP_13177170.1| ribosomal protein L1 [Staphylococcus epidermidis VCU118]
gi|418617609|ref|ZP_13180500.1| ribosomal protein L1 [Staphylococcus epidermidis VCU120]
gi|418621523|ref|ZP_13184292.1| ribosomal protein L1 [Staphylococcus epidermidis VCU123]
gi|418624660|ref|ZP_13187330.1| ribosomal protein L1 [Staphylococcus epidermidis VCU125]
gi|418626334|ref|ZP_13188947.1| ribosomal protein L1 [Staphylococcus epidermidis VCU126]
gi|418629609|ref|ZP_13192106.1| ribosomal protein L1 [Staphylococcus epidermidis VCU127]
gi|418631351|ref|ZP_13193815.1| ribosomal protein L1 [Staphylococcus epidermidis VCU128]
gi|418634165|ref|ZP_13196561.1| ribosomal protein L1 [Staphylococcus epidermidis VCU129]
gi|418664647|ref|ZP_13226114.1| ribosomal protein L1 [Staphylococcus epidermidis VCU081]
gi|419770362|ref|ZP_14296442.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-250]
gi|419772798|ref|ZP_14298824.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-K]
gi|420164374|ref|ZP_14671104.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM095]
gi|420166794|ref|ZP_14673474.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM088]
gi|420169354|ref|ZP_14675955.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM087]
gi|420171638|ref|ZP_14678176.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM070]
gi|420172244|ref|ZP_14678754.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM067]
gi|420175656|ref|ZP_14682090.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM061]
gi|420178474|ref|ZP_14684805.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM057]
gi|420179573|ref|ZP_14685861.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM053]
gi|420182230|ref|ZP_14688368.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM049]
gi|420186439|ref|ZP_14692507.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM040]
gi|420188147|ref|ZP_14694161.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM039]
gi|420191080|ref|ZP_14697016.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM037]
gi|420193481|ref|ZP_14699333.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM023]
gi|420195771|ref|ZP_14701558.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM021]
gi|420196756|ref|ZP_14702495.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM020]
gi|420200925|ref|ZP_14706563.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM031]
gi|420202990|ref|ZP_14708576.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM018]
gi|420203538|ref|ZP_14709100.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM015]
gi|420208675|ref|ZP_14714133.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM003]
gi|420213007|ref|ZP_14718348.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM001]
gi|420213820|ref|ZP_14719102.1| ribosomal protein L1 [Staphylococcus epidermidis NIH05005]
gi|420218194|ref|ZP_14723292.1| ribosomal protein L1 [Staphylococcus epidermidis NIH05001]
gi|420218739|ref|ZP_14723793.1| ribosomal protein L1 [Staphylococcus epidermidis NIH04008]
gi|420222639|ref|ZP_14727556.1| ribosomal protein L1 [Staphylococcus epidermidis NIH08001]
gi|420225496|ref|ZP_14730326.1| ribosomal protein L1 [Staphylococcus epidermidis NIH06004]
gi|420226427|ref|ZP_14731211.1| ribosomal protein L1 [Staphylococcus epidermidis NIH05003]
gi|420228746|ref|ZP_14733463.1| ribosomal protein L1 [Staphylococcus epidermidis NIH04003]
gi|420231114|ref|ZP_14735769.1| ribosomal protein L1 [Staphylococcus epidermidis NIH051668]
gi|420233750|ref|ZP_14738329.1| ribosomal protein L1 [Staphylococcus epidermidis NIH051475]
gi|421607874|ref|ZP_16049108.1| 50S ribosomal protein L1 [Staphylococcus epidermidis AU12-03]
gi|33301560|sp|Q8CTT4.1|RL1_STAES RecName: Full=50S ribosomal protein L1
gi|81675388|sp|Q5HRL4.1|RL1_STAEQ RecName: Full=50S ribosomal protein L1
gi|27314761|gb|AAO03898.1|AE016744_301 50S ribosomal protein L1 [Staphylococcus epidermidis ATCC 12228]
gi|57636788|gb|AAW53576.1| ribosomal protein L1 [Staphylococcus epidermidis RP62A]
gi|242234648|gb|EES36960.1| 50S ribosomal protein L1 [Staphylococcus epidermidis W23144]
gi|251806498|gb|EES59155.1| 50S ribosomal protein L1 [Staphylococcus epidermidis BCM-HMP0060]
gi|281296339|gb|EFA88858.1| ribosomal protein L1 [Staphylococcus epidermidis SK135]
gi|291317943|gb|EFE58351.1| 50S ribosomal protein L1 [Staphylococcus epidermidis
M23864:W2(grey)]
gi|319399713|gb|EFV87962.1| ribosomal protein L1 [Staphylococcus epidermidis FRI909]
gi|329729465|gb|EGG65868.1| ribosomal protein L1 [Staphylococcus epidermidis VCU144]
gi|329734673|gb|EGG70980.1| ribosomal protein L1 [Staphylococcus epidermidis VCU028]
gi|329738060|gb|EGG74281.1| ribosomal protein L1 [Staphylococcus epidermidis VCU045]
gi|341650530|gb|EGS74350.1| ribosomal protein L1 [Staphylococcus epidermidis VCU037]
gi|341653031|gb|EGS76804.1| ribosomal protein L1 [Staphylococcus epidermidis VCU105]
gi|341653846|gb|EGS77611.1| ribosomal protein L1 [Staphylococcus epidermidis VCU109]
gi|365225757|gb|EHM66995.1| ribosomal protein L1 [Staphylococcus epidermidis VCU071]
gi|365231842|gb|EHM72859.1| ribosomal protein L1 [Staphylococcus epidermidis 14.1.R1.SE]
gi|374405284|gb|EHQ76226.1| ribosomal protein L1 [Staphylococcus epidermidis VCU041]
gi|374406863|gb|EHQ77738.1| ribosomal protein L1 [Staphylococcus epidermidis VCU065]
gi|374410303|gb|EHQ81062.1| ribosomal protein L1 [Staphylococcus epidermidis VCU081]
gi|374818036|gb|EHR82208.1| ribosomal protein L1 [Staphylococcus epidermidis VCU120]
gi|374821421|gb|EHR85484.1| ribosomal protein L1 [Staphylococcus epidermidis VCU117]
gi|374821467|gb|EHR85528.1| ribosomal protein L1 [Staphylococcus epidermidis VCU118]
gi|374826857|gb|EHR90733.1| ribosomal protein L1 [Staphylococcus epidermidis VCU125]
gi|374828754|gb|EHR92579.1| ribosomal protein L1 [Staphylococcus epidermidis VCU123]
gi|374832891|gb|EHR96594.1| ribosomal protein L1 [Staphylococcus epidermidis VCU126]
gi|374833372|gb|EHR97060.1| ribosomal protein L1 [Staphylococcus epidermidis VCU127]
gi|374835452|gb|EHR99062.1| ribosomal protein L1 [Staphylococcus epidermidis VCU128]
gi|374837467|gb|EHS01031.1| ribosomal protein L1 [Staphylococcus epidermidis VCU129]
gi|383357308|gb|EID34783.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-250]
gi|383358891|gb|EID36333.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-K]
gi|394231384|gb|EJD77014.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM087]
gi|394231763|gb|EJD77386.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM095]
gi|394232714|gb|EJD78327.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM088]
gi|394237100|gb|EJD82595.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM070]
gi|394242834|gb|EJD88212.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM061]
gi|394242884|gb|EJD88261.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM067]
gi|394246409|gb|EJD91667.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM057]
gi|394250214|gb|EJD95408.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM049]
gi|394252155|gb|EJD97196.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM040]
gi|394253562|gb|EJD98567.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM053]
gi|394255407|gb|EJE00358.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM039]
gi|394258038|gb|EJE02933.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM037]
gi|394259923|gb|EJE04751.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM023]
gi|394262892|gb|EJE07644.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM021]
gi|394267258|gb|EJE11859.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM020]
gi|394267406|gb|EJE11999.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM031]
gi|394268863|gb|EJE13414.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM018]
gi|394274499|gb|EJE18915.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM015]
gi|394277255|gb|EJE21581.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM001]
gi|394281376|gb|EJE25625.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM003]
gi|394284218|gb|EJE28372.1| ribosomal protein L1 [Staphylococcus epidermidis NIH05005]
gi|394284674|gb|EJE28776.1| ribosomal protein L1 [Staphylococcus epidermidis NIH05001]
gi|394288901|gb|EJE32799.1| ribosomal protein L1 [Staphylococcus epidermidis NIH08001]
gi|394291813|gb|EJE35598.1| ribosomal protein L1 [Staphylococcus epidermidis NIH04008]
gi|394293563|gb|EJE37277.1| ribosomal protein L1 [Staphylococcus epidermidis NIH06004]
gi|394298803|gb|EJE42365.1| ribosomal protein L1 [Staphylococcus epidermidis NIH05003]
gi|394300209|gb|EJE43725.1| ribosomal protein L1 [Staphylococcus epidermidis NIH04003]
gi|394303189|gb|EJE46617.1| ribosomal protein L1 [Staphylococcus epidermidis NIH051668]
gi|394304924|gb|EJE48315.1| ribosomal protein L1 [Staphylococcus epidermidis NIH051475]
gi|406656488|gb|EKC82893.1| 50S ribosomal protein L1 [Staphylococcus epidermidis AU12-03]
gi|410879571|gb|EKS27412.1| 50S ribosomal protein L1 [Staphylococcus epidermidis BVS058A4]
Length = 231
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 73/147 (49%), Gaps = 15/147 (10%)
Query: 154 HGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG +S ++ F + + + ++ G VG++D ++ I++G F V+ P ++
Sbjct: 67 HGTGKSQRVLVFA-KGDKITEAEEAGADYVGEADYVQKIQQGWFD---FDVVVATPDMMG 122
Query: 212 DLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIG 268
++ ++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG
Sbjct: 123 EVGKLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKA------GIVHASIG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPPS 295
++ +E+L DN + + ++ KP S
Sbjct: 177 KVSFDEEKLVDNFRTLQDVLAKAKPAS 203
>gi|293375378|ref|ZP_06621659.1| ribosomal protein L1 [Turicibacter sanguinis PC909]
gi|325844441|ref|ZP_08168168.1| ribosomal protein L1 [Turicibacter sp. HGF1]
gi|292645931|gb|EFF63960.1| ribosomal protein L1 [Turicibacter sanguinis PC909]
gi|325489115|gb|EGC91499.1| ribosomal protein L1 [Turicibacter sp. HGF1]
Length = 231
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 12/119 (10%)
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLI 237
VGDSD I I++G + F V+ P ++A++ ++ +L R +P K+ T+ +D+
Sbjct: 94 FVGDSDMINKIQQGWME---FDVVVATPDMMAEVGKLGRVLGPRGLMPNPKTGTVTMDVT 150
Query: 238 GIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
++ G ++Y + K G IG++ E+L N K I I KP +
Sbjct: 151 KAINEIKAGKVEYRVDKA------GNIHVPIGKVSFENEKLVGNFKAIYDTILKAKPSA 203
>gi|416073531|ref|ZP_11584230.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|444337380|ref|ZP_21151368.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
gi|348007264|gb|EGY47588.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype b str. SCC1398]
gi|443547035|gb|ELT56604.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype b str. SCC4092]
Length = 229
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A + G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGREVRVAVFTQGANAEAAKAAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S++QL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSEDQLKENLQALLAALTKAKPTT 203
>gi|224023597|ref|ZP_03641963.1| hypothetical protein BACCOPRO_00304 [Bacteroides coprophilus DSM
18228]
gi|224016819|gb|EEF74831.1| hypothetical protein BACCOPRO_00304 [Bacteroides coprophilus DSM
18228]
Length = 232
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 21/153 (13%)
Query: 151 SFDHGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQF 202
S HG + + + C+ AA ++ G VG + I+ I+ G ++TMP+
Sbjct: 64 SLPHGTGKQVRVLVLCTPDVEAAA-KEAGADYVGLDEYIEKIKGGWTDIDVIITMPSIMG 122
Query: 203 VICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
I L ++ RGL+ P KS T+ +D+ K ++ G K D + G
Sbjct: 123 KIGA---LGRVLGPRGLM----PNPKSGTVTMDVAKAVKEVKQG-----KIDFKVDKSGI 170
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ + +Q+ DN K +A I +KP +
Sbjct: 171 VHTSIGKVSFTADQIRDNAKEFIATIIKLKPTT 203
>gi|261854940|ref|YP_003262223.1| 50S ribosomal protein L1 [Halothiobacillus neapolitanus c2]
gi|261835409|gb|ACX95176.1| ribosomal protein L1 [Halothiobacillus neapolitanus c2]
Length = 231
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 103/244 (42%), Gaps = 40/244 (16%)
Query: 99 QEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHI----------VEV 148
Q+A+AA + P Y AF E+ST K V+ +D H+ V
Sbjct: 8 QKAIAAKVNANQP--YAAADAF-NLLKEVSTV---KFVEAVDVSVHLGVDPRRSDQMVRG 61
Query: 149 EHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNP 207
+G +S+ +A +Q A + G +VG D I++G + F VI P
Sbjct: 62 ATVLPNGTGKSVRVAVFAQGANAEAAKAAGADIVGFEDLAAEIKQGRMD---FDVVIATP 118
Query: 208 KILADLMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDF 260
D MR+ G L + +P K T+ VD K + G ++Y +K
Sbjct: 119 ----DAMRVVGQLGQVLGPRGLMPNPKVGTVAVDAAMAVKNAKAGQVRYRTEKG------ 168
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLD 320
G IG+++ + E L +NL +LAD++ KP + ++ R+ + S P +D
Sbjct: 169 GIIHCTIGKVNFTPEALTENLNALLADLNKAKPAA--SKGIYMKRVSVSSTMGP-GLLVD 225
Query: 321 LSGL 324
L+ L
Sbjct: 226 LASL 229
>gi|424825318|ref|ZP_18250305.1| 50S ribosomal protein L1 [Chlamydophila abortus LLG]
gi|333410417|gb|EGK69404.1| 50S ribosomal protein L1 [Chlamydophila abortus LLG]
Length = 232
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S HG +++ I + E A + D G VG D ++ I G V + P +
Sbjct: 64 SLPHGTGKTLKILVFAAGEKAKEALDAGADFVGSEDLVEKIRGGWVDC---DVAVATPDM 120
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHI 267
+ ++ ++ +L R +PT K+ T+ +D+ L+ G K K D G + +
Sbjct: 121 MREVGKLGKVLGPRNLMPTPKAGTVTMDVTKTIAELRKG-KIEFKADRA----GVCNAGV 175
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPS 295
G+L L++N++ + + + KPP+
Sbjct: 176 GKLSFDGHLLKENIETLCSALIKAKPPA 203
>gi|373489187|ref|ZP_09579850.1| ribosomal protein L1 [Holophaga foetida DSM 6591]
gi|372004663|gb|EHP05302.1| ribosomal protein L1 [Holophaga foetida DSM 6591]
Length = 230
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 66/146 (45%), Gaps = 13/146 (8%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R++ +A + E + G +VG D ++ I G + F ++ P ++
Sbjct: 66 HGTGRTMRVAVIAAGEKIKDAEAAGAEIVGGDDLVERIAGGFLE---FDALVATPDMMKG 122
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
+ R+ +L R +P K+ T+ D+ K ++ G ++Y + K G +G+
Sbjct: 123 VGRLGKVLGPRGLMPNPKTGTVTFDVAKAIKEIKAGKVEYRVDKT------GIIHAPVGK 176
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
L E+L +N K ++ + KP +
Sbjct: 177 LSFGVEKLAENAKALIDAVQKAKPSA 202
>gi|322513225|ref|ZP_08066351.1| 50S ribosomal protein L1 [Actinobacillus ureae ATCC 25976]
gi|322121001|gb|EFX92842.1| 50S ribosomal protein L1 [Actinobacillus ureae ATCC 25976]
Length = 229
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 21/148 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R+ +A +Q A + G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGRTARVAVFTQGVNAEAAKAAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKP 293
IG+ D + EQL+DNL +LA ++ KP
Sbjct: 174 TIGKADFAPEQLKDNLVALLAALNKAKP 201
>gi|269215891|ref|ZP_06159745.1| ribosomal protein L1 [Slackia exigua ATCC 700122]
gi|402829650|ref|ZP_10878524.1| ribosomal protein L1 [Slackia sp. CM382]
gi|269130841|gb|EEZ61917.1| ribosomal protein L1 [Slackia exigua ATCC 700122]
gi|402283646|gb|EJU32157.1| ribosomal protein L1 [Slackia sp. CM382]
Length = 236
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/137 (22%), Positives = 62/137 (45%), Gaps = 10/137 (7%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A ++ A ++ G +VG D + I+ G + F + P ++A + R+ +L
Sbjct: 74 VAVFAEGAQADAAREAGADIVGSDDLVADIQAGTID---FDAAVATPNMMAKVGRLGRIL 130
Query: 221 KKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLE 278
R +P K T+ +D+ L+ G K + + FG + +G++ E+L
Sbjct: 131 GPRGLMPNPKLGTVTMDVATAIADLKGG-----KVEYRADRFGIAHVILGKVSFDAEKLA 185
Query: 279 DNLKRILADISTMKPPS 295
+N + +I MKP +
Sbjct: 186 ENYGAVYDEIVRMKPSA 202
>gi|418049834|ref|ZP_12687921.1| ribosomal protein L1 [Mycobacterium rhodesiae JS60]
gi|353190739|gb|EHB56249.1| ribosomal protein L1 [Mycobacterium rhodesiae JS60]
Length = 237
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A + E A Q ++ G +VG D I+ I+ G++ F I P +A + RI +L
Sbjct: 75 VAVFAVGEKAEQAKEAGADIVGSDDLIEQIQGGMLD---FDAAIATPDQMAKVGRIARVL 131
Query: 221 KKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLE 278
R +P K+ T+ D+ ++ G K + + D Q F IG+ +++L
Sbjct: 132 GPRGLMPNPKTGTVTPDVAKAVTDIKGG-KINFRVDKQAN----LHFVIGKASFDEKKLA 186
Query: 279 DNLKRILADISTMKPPS 295
+N L ++ KP S
Sbjct: 187 ENYGAALDEVLRAKPSS 203
>gi|407014796|gb|EKE28771.1| ribosomal protein L1 [uncultured bacterium (gcode 4)]
Length = 227
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 200 FQFVICNPKILADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQE 257
F I P ++ + ++ +L K +P K+ T+G DL+ I K L G K+ K D Q
Sbjct: 111 FDVAIATPAMMRKMWKVAKVLWPKGLMPNPKAGTVGDDLLSIIKELAAG-KFEFKNDKQ- 168
Query: 258 QDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
G +G+L ++++N++ + I +KP
Sbjct: 169 ---GNVHSIVGKLSFGSSKIKENIEAFVKAIKEVKP 201
>gi|406990896|gb|EKE10498.1| ribosomal protein L1 [uncultured bacterium]
Length = 230
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A ++ A + + G LVGD D + ++ G + F I P ++A L ++ +L
Sbjct: 73 VAVFAKGPKAEEARKAGADLVGDEDLAEKVQAGQIN---FDRCIATPDMMALLGKLARIL 129
Query: 221 KKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQL 277
R +P K T+ +D+ K + G ++Y +K G IG+ S E +
Sbjct: 130 GPRGLMPNPKLGTVTMDVAEAVKAAKGGQVEYRAEKG------GIVHAGIGKASFSAEDI 183
Query: 278 EDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLI 325
E NL+ + I +P ++ +I L S P K+D++ L+
Sbjct: 184 EKNLRSFVEAIMKTRPTGI--KGSYVKKISLSSTMGPS-VKIDVADLV 228
>gi|62185277|ref|YP_220062.1| 50S ribosomal protein L1 [Chlamydophila abortus S26/3]
gi|81312567|sp|Q5L5I0.1|RL1_CHLAB RecName: Full=50S ribosomal protein L1
gi|62148344|emb|CAH64111.1| putative 50S ribosomal protein L1 [Chlamydophila abortus S26/3]
Length = 232
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 67/148 (45%), Gaps = 11/148 (7%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S HG +++ I + E A + D G VG D ++ I G V + P +
Sbjct: 64 SLPHGTGKTLKILVFAAGEKAKEALDAGADFVGSDDLVEKIRGGWVDC---DVAVATPDM 120
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHI 267
+ ++ ++ +L R +PT K+ T+ +D+ L+ G K K D G + +
Sbjct: 121 MREVGKLGKVLGPRNLMPTPKAGTVTMDVTKTIAELRKG-KIEFKADRA----GVCNAGV 175
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPS 295
G+L L++N++ + + + KPP+
Sbjct: 176 GKLSFDGHLLKENIETLCSALIKAKPPA 203
>gi|416108621|ref|ZP_11591116.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
gi|348004146|gb|EGY44671.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype c str. SCC2302]
Length = 222
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A + G LVG D + I++G + F VI +P D
Sbjct: 60 HGTGREVRVAVFTQGANAEAAKAAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 112
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 113 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 166
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S++QL++NL+ +LA ++ KP +
Sbjct: 167 TIGKANFSEDQLKENLQALLAALTKAKPTT 196
>gi|407772045|ref|ZP_11119383.1| 50S ribosomal protein L1 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407284135|gb|EKF09655.1| 50S ribosomal protein L1 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 232
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 70/147 (47%), Gaps = 13/147 (8%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S HG +++ +A ++ A + Q G VG D ++ +++G + + VI P +
Sbjct: 64 SLPHGTGKTMRVAVFAKDAKAEEAQKAGADAVGAEDLMEAMQKGDLN---YDRVIATPDM 120
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
+A + R+ +L R +P K T+ +D+ + G +++ +K+ G
Sbjct: 121 MAVVGRLGKVLGPRGLMPNPKLGTVTMDVAQAVSDAKAGQVQFRAEKN------GIVHAG 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKP 293
IG+ S+EQL +N K ++ I KP
Sbjct: 175 IGKASFSEEQLVENAKAFVSAIVKAKP 201
>gi|416046422|ref|ZP_11575699.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|416057719|ref|ZP_11580332.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
gi|416085581|ref|ZP_11587219.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
gi|347994658|gb|EGY35917.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype d str. I63B]
gi|348000502|gb|EGY41284.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype e str. SCC393]
gi|348010175|gb|EGY50249.1| ribosomal protein L1 [Aggregatibacter actinomycetemcomitans
serotype b str. I23C]
Length = 222
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 72/150 (48%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A + G LVG D + I++G + F VI +P D
Sbjct: 60 HGTGREVRVAVFTQGANAEAAKAAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 112
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 113 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 166
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S++QL++NL+ +LA ++ KP +
Sbjct: 167 TIGKANFSEDQLKENLQALLAALTKAKPTT 196
>gi|333980420|ref|YP_004518365.1| 50S ribosomal protein L1 [Desulfotomaculum kuznetsovii DSM 6115]
gi|333823901|gb|AEG16564.1| ribosomal protein L1 [Desulfotomaculum kuznetsovii DSM 6115]
Length = 232
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 104/240 (43%), Gaps = 49/240 (20%)
Query: 64 KKDIYASRKVDESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGA 123
KK + A+RKVD S L P EALA ++E + A
Sbjct: 6 KKYLDAARKVDRSKLYDP-----------------AEALALVKE--------MASAKFDE 40
Query: 124 TVEISTTTHQKKVKYMDPWTHIVEVEHSF----DHGEDRSIIAFCSQHETAAQLQDMGVA 179
TVE++ +DP +V + G+ R+++ F ++ E A + ++ G
Sbjct: 41 TVEVAVKLG------VDPRHADQQVRGAVVLPHGTGKTRTVLVF-AKGEKAREAEEAGAD 93
Query: 180 LVGDSDTIKGIER-GLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDL 236
VG D + I++ G + F + P +++ + R+ +L R +P K+ T+ D+
Sbjct: 94 FVGAEDMVAKIQQEGWLG---FDVAVATPDMMSLVGRLGRILGPRGLMPNPKTGTVTFDV 150
Query: 237 IGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
K ++ G I+Y + K G IG++ E+L +NL+ ++ + +KP +
Sbjct: 151 AQAVKEVKAGKIEYRVDK------AGIIHAPIGKVSFDVEKLTENLRTLVEQLIRVKPAA 204
>gi|410461729|ref|ZP_11315375.1| 50S ribosomal protein L1 [Bacillus azotoformans LMG 9581]
gi|409925496|gb|EKN62707.1| 50S ribosomal protein L1 [Bacillus azotoformans LMG 9581]
Length = 233
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 80/174 (45%), Gaps = 16/174 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ + ++ F ++ E + + G VGD++ I I++G F V+ P ++ ++
Sbjct: 70 GKTQRVLVF-AKGEKVKEAEAAGADYVGDAEFITKIQQGWFE---FDVVVATPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ D+ ++ G ++Y + K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTFDVTKAVNDIKAGKVEYRVDKA------GNIHVPIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLI 325
++L NL I+ I KP + ++ + + S P K+D+S L+
Sbjct: 180 FEDDKLSGNLATIVETIQKAKPAA--AKGTYMKNVAIASTMGP-GIKVDVSALL 230
>gi|170288281|ref|YP_001738519.1| 50S ribosomal protein L1 [Thermotoga sp. RQ2]
gi|226730325|sp|B1L938.1|RL1_THESQ RecName: Full=50S ribosomal protein L1
gi|170175784|gb|ACB08836.1| ribosomal protein L1 [Thermotoga sp. RQ2]
Length = 233
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 133 QKKVKYMDPWTHI---VEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKG 189
Q + Y P HI + + H G++ ++ F ++ E A + + G VG D ++
Sbjct: 47 QTGIDYRKPEQHIRGTIVLPHG--TGKEVKVLVF-AKGEKAKEALEAGADYVGAEDLVEK 103
Query: 190 IER-GLVTMPTFQFVICNPKILADLMRIRGLLKK------RIPTLKSQTLGVDLIGIAKR 242
IE+ G + F I P D+MRI G L K +P+ KS T+ ++ K
Sbjct: 104 IEKEGFLD---FDVAIATP----DMMRIIGRLGKILGPRGLMPSPKSGTVTQEVAEAVKE 156
Query: 243 LQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDF 302
+ G + ++ D G +G+ E+L++N+ + I MKP F
Sbjct: 157 FKKG-RIEVRTDKT----GNIHIPVGKRSFDNEKLKENIIAAIKQIMQMKPAG--VKGQF 209
Query: 303 ITRILLWSEPSPEKFKLDLSGLIE 326
I + +L S P KL+L L++
Sbjct: 210 IKKAVLSSTMGP-GIKLNLQSLLK 232
>gi|288803795|ref|ZP_06409222.1| ribosomal protein L1 [Prevotella melaninogenica D18]
gi|288333702|gb|EFC72150.1| ribosomal protein L1 [Prevotella melaninogenica D18]
Length = 230
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 83/187 (44%), Gaps = 32/187 (17%)
Query: 126 EISTTTHQKKVKY-----MDP--WTHIVEVEHSFDHGEDR--SIIAFCSQHETAAQLQDM 176
EI+TT V +DP +V S HG + ++ C+ + AA ++
Sbjct: 32 EITTTKFDASVDVDVRLGVDPRKANQMVRGVVSLPHGTGKVTRVLCLCTPDQEAAA-KEA 90
Query: 177 GVALVGDSDTIKGIERG------LVTMPTFQFVICNPKI--LADLMRIRGLLKKRIPTLK 228
G VG + ++ I+ G ++TMP+ C K+ L ++ RGL+ P K
Sbjct: 91 GADYVGLDEYVEKIKGGWTDIDVIITMPS-----CMGKLGPLGRVLGPRGLM----PNPK 141
Query: 229 SQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADI 288
S T+ +D+ K ++ G K D + G IG++ M+ EQ+ N K ++ +
Sbjct: 142 SGTVTMDVAKAVKDVKQG-----KIDFKVDKAGIIHTSIGKVSMTAEQICGNAKEFISTV 196
Query: 289 STMKPPS 295
+KP +
Sbjct: 197 IKLKPAA 203
>gi|392414768|ref|YP_006451373.1| ribosomal protein L1 [Mycobacterium chubuense NBB4]
gi|390614544|gb|AFM15694.1| ribosomal protein L1 [Mycobacterium chubuense NBB4]
Length = 235
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 15/147 (10%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG ++ +A + + A Q + G +VG D I+ I+ G + F I P +A
Sbjct: 67 HGTGKTARVAVFAVGDKAEQAEAAGADVVGSDDLIERIQGGFLD---FDAAIATPDQMAK 123
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQ--TGIKYSMKKDPQEQDFGYSDFHIG 268
+ RI +L R +P K+ T+ D +AK +Q G K + + D Q F IG
Sbjct: 124 VGRIARILGPRGLMPNPKTGTVTPD---VAKAVQDIKGGKINFRVDKQAN----LHFVIG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPPS 295
+ ++ L +N L +I KP S
Sbjct: 177 KASFDEKSLAENYGAALDEILRAKPSS 203
>gi|379795010|ref|YP_005325008.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
MSHR1132]
gi|356872000|emb|CCE58339.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
MSHR1132]
Length = 230
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ +S++ F + + A+ + G VG+++ ++ I++G F V+ P ++ ++
Sbjct: 70 GKSQSVLVFA-KGDKIAEAEAAGADFVGEAEYVQKIQQGWFD---FDVVVATPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKA------GIVHASIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
+ EQL +N + ++ KP S
Sbjct: 180 FTDEQLIENFNTLQDVLAKAKPSS 203
>gi|383775759|ref|YP_005460325.1| 50S ribosomal protein L1 [Actinoplanes missouriensis 431]
gi|381368991|dbj|BAL85809.1| putative ribosomal protein L1 [Actinoplanes missouriensis 431]
Length = 239
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 94/211 (44%), Gaps = 35/211 (16%)
Query: 94 RIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDP--WTHIVEVEHS 151
++++ ++A+A +ET P ++ ATVE++ +DP +V +
Sbjct: 19 KLYEPKDAVALAKETS-PVKFD-------ATVEVAMRLG------VDPRKADQMVRGTVN 64
Query: 152 FDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
HG ++ +I F +Q A + G VG + + I+ G + F I P
Sbjct: 65 LPHGTGKTARVIVF-AQGAKAEEAVAAGADEVGTDELVARIQGGWLD---FDAAIATPDQ 120
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
+A + RI +L R +P K+ T+ +D+ ++ G I + + K +S+ H
Sbjct: 121 MAKIGRIARILGPRGLMPNPKTGTVTMDVTKAVNEIKGGKITFRVDK--------HSNLH 172
Query: 267 --IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ S EQL DN +L ++ KP +
Sbjct: 173 MIIGKASFSPEQLVDNYAAVLDEVLRAKPSA 203
>gi|223982609|ref|ZP_03632844.1| hypothetical protein HOLDEFILI_00118 [Holdemania filiformis DSM
12042]
gi|223965446|gb|EEF69723.1| hypothetical protein HOLDEFILI_00118 [Holdemania filiformis DSM
12042]
Length = 227
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 41/203 (20%), Positives = 91/203 (44%), Gaps = 21/203 (10%)
Query: 104 AIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKY-----MDPWTHIVEVEHS--FDHGE 156
A+++ +Y+L A + +I+TT V+ +DP ++ + +G
Sbjct: 11 ALKQVDAAKLYSLAEA-VALAKKINTTKFDASVEISFNLNVDPRHADQQIRGAMVLPNGT 69
Query: 157 DRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMR 215
RS + +Q + +D G VG + ++ I++G F ++ P ++ +L +
Sbjct: 70 GRSQKVLVVTQGAKEQEAKDAGADFVGGKEILEDIKKGWFG---FDVIVATPDMMGELGK 126
Query: 216 IRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDM 272
+ +L K +P K+ T+ +++ ++ G + Y + K+ G + IG+
Sbjct: 127 LGKILGPKGLMPNPKTGTVTMNIANAVNEIKKGKVTYRVDKE------GNINVMIGKCSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
+ EQL +N K + I+ +P +
Sbjct: 181 TDEQLAENAKALYNVIAKARPAA 203
>gi|417947843|ref|ZP_12590993.1| 50S ribosomal protein L1 [Vibrio splendidus ATCC 33789]
gi|342810472|gb|EGU45551.1| 50S ribosomal protein L1 [Vibrio splendidus ATCC 33789]
Length = 234
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R I +A +Q A ++ G +VG D + +++G + F V+ +P D
Sbjct: 67 HGTGREIRVAVFTQGANAEAAKEAGADVVGMEDLAEQVKKGEMN---FDVVVASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGTILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ QL++NL+ +L + KP S
Sbjct: 174 TIGKASFEANQLQENLEALLVALKKAKPSS 203
>gi|422011365|ref|ZP_16358192.1| ribosomal protein L1 [Actinomyces georgiae F0490]
gi|394765455|gb|EJF46898.1| ribosomal protein L1 [Actinomyces georgiae F0490]
Length = 235
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 151 SFDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
S HG ++ ++ F A + D G VG + I+ + +G F + P
Sbjct: 64 SLPHGTGKTARVLVFAVGPRAQAAI-DAGADEVGGDELIEKVSKGYTD---FDVAVATPD 119
Query: 209 ILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
++ + R+ +L R +P K+ T+ +D+ K ++ G I++ + K F
Sbjct: 120 LMGKVGRLGRILGPRGLMPNPKTGTVTMDVAKAVKEIKGGRIEFRVDKHANLA------F 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G+ + EQL +N +L ++ +KP S
Sbjct: 174 VVGKASFTAEQLTENYASVLDEVLRLKPSS 203
>gi|417844265|ref|ZP_12490310.1| 50S ribosomal protein L1 [Haemophilus haemolyticus M21639]
gi|341956896|gb|EGT83311.1| 50S ribosomal protein L1 [Haemophilus haemolyticus M21639]
Length = 229
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A + G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGREVRVAVFTQGANADAAKAAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S+ QL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSEVQLKENLQALLAALNKAKPTT 203
>gi|335053203|ref|ZP_08546049.1| ribosomal protein L1 [Propionibacterium sp. 434-HC2]
gi|333767628|gb|EGL44863.1| ribosomal protein L1 [Propionibacterium sp. 434-HC2]
Length = 232
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 154 HGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG ++ ++ F + E A ++ G VGD D I ++ G + F V+ P ++
Sbjct: 66 HGTGKTTRVLVFAT-GEKAEAAREAGADEVGDDDLIAKVQGGYLD---FDSVVATPDMMG 121
Query: 212 DLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH--I 267
+ R+ +L R +P K+ T+ +D+ +++G K + D Y++ H I
Sbjct: 122 KVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVSDIKSG-KIEFRTDR------YANLHFLI 174
Query: 268 GRLDMSQEQLEDNLKRILADISTMKP 293
G++ E+L +N L +I +KP
Sbjct: 175 GKVSFGSEKLAENYFAALDEILRLKP 200
>gi|307565757|ref|ZP_07628226.1| 50S ribosomal protein L1 [Prevotella amnii CRIS 21A-A]
gi|307345583|gb|EFN90951.1| 50S ribosomal protein L1 [Prevotella amnii CRIS 21A-A]
Length = 230
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 23/156 (14%)
Query: 148 VEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQ 201
V + G+ ++ C+ + AA ++ G VG + ++ I+ G ++TMP+
Sbjct: 63 VSLPYGTGKVTRVLCLCTPDQEAAA-KEAGADHVGLDEYVEKIKGGWTDIDVIITMPS-- 119
Query: 202 FVICNPKI--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQD 259
C K+ L ++ RGL+ P KS T+ +D+ K ++ G K D +
Sbjct: 120 ---CMGKLGPLGRVLGPRGLM----PNPKSGTVTMDVAKAVKEVKQG-----KIDFKVDK 167
Query: 260 FGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
G IG++ MS EQ+ N K ++ + +KP +
Sbjct: 168 AGIIHTSIGKVGMSAEQIFGNAKEFISTVIKLKPAA 203
>gi|373467193|ref|ZP_09558494.1| ribosomal protein L1 [Haemophilus sp. oral taxon 851 str. F0397]
gi|371759152|gb|EHO47898.1| ribosomal protein L1 [Haemophilus sp. oral taxon 851 str. F0397]
Length = 229
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A + G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGREVRVAVFTQGANADAAKAAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S+ QL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSEVQLKENLQALLAALNKAKPTT 203
>gi|169830423|ref|YP_001716405.1| 50S ribosomal protein L1 [Candidatus Desulforudis audaxviator
MP104C]
gi|226724901|sp|B1I1L3.1|RL1_DESAP RecName: Full=50S ribosomal protein L1
gi|169637267|gb|ACA58773.1| ribosomal protein L1 [Candidatus Desulforudis audaxviator MP104C]
Length = 231
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 69/146 (47%), Gaps = 17/146 (11%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ R+++ F ++ E + + G VG + + I+ G + F I P +++ +
Sbjct: 70 GKTRTVLVF-AKGEKVTEAEKAGADYVGGEEMVAKIQGGWME---FDVAIATPDMMSAVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH--IGR 269
+I +L R +P K+ T+ D+ ++ G I+Y + K + H IG+
Sbjct: 126 KIGRILGPRGLMPNPKTGTVTFDIARAVAEVKAGKIQYRVDK--------AGNIHAPIGK 177
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
+ E+LE+NLK ++ + KP +
Sbjct: 178 VSFEVEKLEENLKTLIDALIRAKPAA 203
>gi|255037206|ref|YP_003087827.1| 50S ribosomal protein L1 [Dyadobacter fermentans DSM 18053]
gi|254949962|gb|ACT94662.1| ribosomal protein L1 [Dyadobacter fermentans DSM 18053]
Length = 232
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 76/172 (44%), Gaps = 15/172 (8%)
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVI 204
+V + H G++ ++ C+ + A+ ++ G VG + I IE+G + +I
Sbjct: 62 VVTLPHG--TGKEVRVLVLCTPDK-EAEAKEAGADYVGLDEYITKIEQGWTDI---DVII 115
Query: 205 CNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
P ++A + R+ +L R +P KS T+ D+ K ++ G K D + G
Sbjct: 116 TMPSVMAKVGRLGKVLGPRGLMPNPKSGTVTPDVAKAVKEVKAG-----KIDFKVDKTGI 170
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
IG++ +QL N ++ + +KP S ++ I L S SP
Sbjct: 171 IHTSIGKVSFGTDQLAQNATEVINTLVRLKPSS--AKGTYVKSIHLSSTMSP 220
>gi|269123302|ref|YP_003305879.1| 50S ribosomal protein L1 [Streptobacillus moniliformis DSM 12112]
gi|268314628|gb|ACZ01002.1| ribosomal protein L1 [Streptobacillus moniliformis DSM 12112]
Length = 235
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 88 QKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVE 147
QK KL+I+ +EAL + +T TVE++ +DP +
Sbjct: 13 QKVDKLKIYTPEEALELVFDTKSAKFVE--------TVELAIRLG------VDPRHADQQ 58
Query: 148 VEHS--FDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVI 204
V + HG ++I I + E + G GD + I I G + F VI
Sbjct: 59 VRGTVILPHGTGKTIKILAITSGENIDKALAAGADFAGDEEYINKISAGWMD---FDLVI 115
Query: 205 CNPKILADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
P ++ L ++ +L K +P KS T+ ++ + + G K + K D G
Sbjct: 116 ATPDMMPKLGKLGRVLGTKGLMPNPKSGTVTTNISQTVEEFKKG-KVAFKVD----KLGS 170
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+++ +EQ+ +N K L I +KP +
Sbjct: 171 IHLPIGKVNFEKEQIIENFKVALGQIIKLKPAA 203
>gi|222099192|ref|YP_002533760.1| 50S ribosomal protein L1 [Thermotoga neapolitana DSM 4359]
gi|254799876|sp|B9KBJ8.1|RL1_THENN RecName: Full=50S ribosomal protein L1
gi|221571582|gb|ACM22394.1| 50S ribosomal protein L1 [Thermotoga neapolitana DSM 4359]
Length = 233
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 28/203 (13%)
Query: 133 QKKVKYMDPWTHI---VEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKG 189
Q + Y P HI + + H G++ ++ F ++ E A + Q+ G VG D ++
Sbjct: 47 QTGIDYRKPDQHIRGTIVLPHG--TGKEVKVLVF-ARGEKAKEAQEAGADYVGAEDLVEK 103
Query: 190 IER-GLVTMPTFQFVICNPKILADLMRIRGLLKK------RIPTLKSQTLGVDLIGIAKR 242
IE+ G + F I P D+MR+ G L K +P+ KS T+ ++ K
Sbjct: 104 IEKEGFLD---FDVAIATP----DMMRVIGRLGKILGPRGLMPSPKSGTVTNEVAEAVKE 156
Query: 243 LQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDF 302
+ G + ++ D G +G+ E++++N+ + I MKP F
Sbjct: 157 FKKG-RIEVRTDKT----GNIHIPVGKKSFDNEKIKENVISAIKQIMQMKPAG--VKGQF 209
Query: 303 ITRILLWSEPSPEKFKLDLSGLI 325
I + +L S P KL+L ++
Sbjct: 210 IKKAVLASTMGP-GIKLNLQSIL 231
>gi|296126980|ref|YP_003634232.1| 50S ribosomal protein L1 [Brachyspira murdochii DSM 12563]
gi|296018796|gb|ADG72033.1| ribosomal protein L1 [Brachyspira murdochii DSM 12563]
Length = 233
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 13/142 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+++ ++ F +Q E A + + G VG D I ++ G F I P ++ ++
Sbjct: 72 GKEKRVVVF-AQGEKADEAKAAGAMEVGFEDLIDKVKGGYTD---FDVAISTPDLMKEVG 127
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L ++ +P K+ T+ +D+ K + G ++Y K+ G IG+
Sbjct: 128 KLGQILGRKGLMPNPKTGTVTLDIAQAVKSFKAGRMEYRADKN------GIVRMGIGKAS 181
Query: 272 MSQEQLEDNLKRILADISTMKP 293
M+ QL +N K +I KP
Sbjct: 182 MNASQLNENFKAFYDEILRKKP 203
>gi|172039968|ref|YP_001799682.1| 50S ribosomal protein L1 [Corynebacterium urealyticum DSM 7109]
gi|448822957|ref|YP_007416122.1| 50S ribosomal protein L1 [Corynebacterium urealyticum DSM 7111]
gi|226724893|sp|B1VEQ9.1|RL1_CORU7 RecName: Full=50S ribosomal protein L1
gi|171851272|emb|CAQ04248.1| 50S ribosomal protein L1 [Corynebacterium urealyticum DSM 7109]
gi|448276454|gb|AGE35878.1| 50S ribosomal protein L1 [Corynebacterium urealyticum DSM 7111]
Length = 238
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 73/164 (44%), Gaps = 17/164 (10%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D ++ F + A ++ G VG ++ I+ I+ G F I P +A +
Sbjct: 70 GKDVRVVVFA-EGPNATAAEEAGADFVGSAELIEKIQGGWTD---FDAAIATPDQMAKVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH--IGRL 270
R+ +L R +P K+ T+ D+ ++ G K S + D S+ H IG+
Sbjct: 126 RVARVLGPRGLMPNPKTGTVTTDVAKAVSEIKGG-KISFRVDKA------SNLHALIGKA 178
Query: 271 DMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+++L +N ++ ++ +KP S +I ++ L S P
Sbjct: 179 SFDEKKLAENYGALIDELLRIKPSS--SKGKYIKKVTLSSTNGP 220
>gi|320095596|ref|ZP_08027259.1| 50S ribosomal protein L1 [Actinomyces sp. oral taxon 178 str.
F0338]
gi|319977504|gb|EFW09184.1| 50S ribosomal protein L1 [Actinomyces sp. oral taxon 178 str.
F0338]
Length = 235
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 151 SFDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
S HG ++ ++ F A + D G VG + I+ + +G F + P
Sbjct: 64 SLPHGTGKTARVLVFAVGPRAQAAI-DAGADEVGGDELIEKVSKGYTD---FDVAVATPD 119
Query: 209 ILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
++ + R+ +L R +P K+ T+ +D+ K ++ G I++ + K F
Sbjct: 120 LMGKVGRLGRILGPRGLMPNPKTGTVTMDVAKAVKEIKGGRIEFRVDKHANLA------F 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G+ + EQL +N +L ++ +KP S
Sbjct: 174 VVGKASFTAEQLTENYGSVLDEVLRLKPSS 203
>gi|294791365|ref|ZP_06756522.1| ribosomal protein L1 [Scardovia inopinata F0304]
gi|294457836|gb|EFG26190.1| ribosomal protein L1 [Scardovia inopinata F0304]
Length = 230
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 71/157 (45%), Gaps = 15/157 (9%)
Query: 144 HIVEVEHSFDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
+V + HG ++ ++ F + A + G VGD + I + G + F
Sbjct: 57 QLVRGTVNLPHGTGKTARVLVFARGPQATAATE-AGADEVGDDELITKVANGYLD---FD 112
Query: 202 FVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQ 258
V+ P ++ + R+ +L R +P K+ T+ +D+ ++ G I++ + KD
Sbjct: 113 AVVATPDMMGKVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVADIKGGKIEFRVDKD---- 168
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
G F IG++ ++ L +N + + +I +KP +
Sbjct: 169 --GNLSFIIGKMSFAEHDLVENFRAVADEIRRLKPAT 203
>gi|260592781|ref|ZP_05858239.1| ribosomal protein L1 [Prevotella veroralis F0319]
gi|383811685|ref|ZP_09967142.1| ribosomal protein L1 [Prevotella sp. oral taxon 306 str. F0472]
gi|260535312|gb|EEX17929.1| ribosomal protein L1 [Prevotella veroralis F0319]
gi|383355702|gb|EID33229.1| ribosomal protein L1 [Prevotella sp. oral taxon 306 str. F0472]
Length = 230
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 23/149 (15%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNPK 208
G+ ++ C+ + AA ++ G VG + ++ I+ G ++TMP+ C K
Sbjct: 70 GKVTRVLCLCTPDQEAAA-KEAGADYVGLDEYVEKIKGGWTDVDVIITMPS-----CMGK 123
Query: 209 I--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
+ L ++ RGL+ P KS T+ +D+ K ++ G K D + G
Sbjct: 124 LGPLGRVLGPRGLM----PNPKSGTVTMDVAKAVKEVKQG-----KIDFKVDKAGIIHTS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ M+ EQ+ N K ++ + +KP +
Sbjct: 175 IGKVSMTAEQIYGNAKEFISTVIKLKPAA 203
>gi|297620826|ref|YP_003708963.1| 50S ribosomal protein L1 [Waddlia chondrophila WSU 86-1044]
gi|297376127|gb|ADI37957.1| 50S ribosomal protein L1 [Waddlia chondrophila WSU 86-1044]
gi|337293915|emb|CCB91903.1| 50S ribosomal protein L1 [Waddlia chondrophila 2032/99]
Length = 232
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 66/143 (46%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ I+ F + L D G GD + + + +G F V+ P ++ D+
Sbjct: 70 GKTTRILVFARGDKIQEAL-DAGADYAGDDEYFEKVGKGWTD---FDAVVATPDLMRDVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
++ +L R +PT K+ T+ + IG A + G K K D +G + +G+L
Sbjct: 126 KLGKILGPRGLMPTPKAGTV-TNEIGKAIQDLKGGKIEFKVD----RYGVVNAAVGKLSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
+ +QL +N+K ++ I KP S
Sbjct: 181 TVQQLVENIKSLIDAIQKQKPAS 203
>gi|398822830|ref|ZP_10581205.1| ribosomal protein L1 [Bradyrhizobium sp. YR681]
gi|398226536|gb|EJN12783.1| ribosomal protein L1 [Bradyrhizobium sp. YR681]
Length = 230
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
+ +G R++ + ++ A + + G +VG D ++ ++ G + F I P +
Sbjct: 63 TLPNGTGRTLRVGVFARGAKADEAKAAGADVVGAEDLVEKVQNGTID---FDRCIATPDM 119
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
+ + R+ +L R +P K T+ +D+ G K + G +++ ++K G
Sbjct: 120 MPLVGRLGKVLGPRGLMPNPKIGTVTMDVTGAVKGAKGGSVEFRVEK------AGILQAG 173
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+G+ S+E+L +N+K + +S KP +I R+ + S P
Sbjct: 174 VGKASFSEEKLVENIKALADAVSKAKPAG--SKGTYIQRVAVSSTMGP 219
>gi|294674793|ref|YP_003575409.1| 50S ribosomal protein L1 [Prevotella ruminicola 23]
gi|294474357|gb|ADE83746.1| ribosomal protein L1 [Prevotella ruminicola 23]
Length = 230
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 78/167 (46%), Gaps = 25/167 (14%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNPK 208
G+ ++A C+ + AA ++ G VG + I+ I+ G ++TMP+ C K
Sbjct: 70 GKVTRVLALCTPDQEAAA-KEAGADYVGLDEYIEKIKGGWTDVDVIITMPS-----CMGK 123
Query: 209 I--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
+ L ++ RGL+ P KS T+ +D+ K ++ G K D + G
Sbjct: 124 LGPLGRVLGPRGLM----PNPKSGTVTMDVAKAVKEVKQG-----KIDFKVDKAGIVHTS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
IG+++ + +Q+ +N K ++ I +KP + +I I L S S
Sbjct: 175 IGKINFTGDQIFENAKEFISTIIKLKPAA--AKGTYIKSIFLSSTMS 219
>gi|407010955|gb|EKE25708.1| 50S ribosomal protein L1 [uncultured bacterium]
Length = 232
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG +++ + ++ + A Q + G VGD D ++ I G F + +P ++
Sbjct: 67 HGRGKTVRVLVFAKGDAADQAKRAGADFVGDDDLVEKIIGGWTE---FDHAVASPDMMGI 123
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ ++ +L R +P K T+ D+ + +L+ G + + D G F +G++
Sbjct: 124 VGKVAKILGPRGLLPNKKLGTVSDDVAEVVAKLKKGQAF-FRNDKA----GIVHFSLGKV 178
Query: 271 DMSQEQLEDNLKRILADISTMKPPS 295
++L+DNL + + KP +
Sbjct: 179 SFGIDKLQDNLAAFIKALQAAKPAT 203
>gi|357041856|ref|ZP_09103564.1| 50S ribosomal protein L1 [Prevotella histicola F0411]
gi|355370196|gb|EHG17583.1| 50S ribosomal protein L1 [Prevotella histicola F0411]
Length = 230
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 23/149 (15%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNPK 208
G+ ++ C+ + AA ++ G VG + ++ I+ G ++TMP+ C K
Sbjct: 70 GKVTRVLCLCTPDQEAAA-KEAGADYVGLDEYVEKIKGGWTDVDVIITMPS-----CMGK 123
Query: 209 I--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
+ L ++ RGL+ P KS T+ +D+ K ++ G K D + G
Sbjct: 124 LGPLGRVLGPRGLM----PNPKSGTVTMDVAKAVKEVKQG-----KIDFKVDKAGIIHTS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ M+ EQ+ N K ++ + +KP +
Sbjct: 175 IGKVSMTAEQIYGNAKEFISTVIKLKPAA 203
>gi|288573180|ref|ZP_06391537.1| ribosomal protein L1 [Dethiosulfovibrio peptidovorans DSM 11002]
gi|288568921|gb|EFC90478.1| ribosomal protein L1 [Dethiosulfovibrio peptidovorans DSM 11002]
Length = 235
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 58/122 (47%), Gaps = 12/122 (9%)
Query: 177 GVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGV 234
G VG D ++ I+ G + F+ V+ P + + R+ +L R +P+ K+ T+
Sbjct: 91 GADFVGGEDMVQKIQGGWLD---FESVVATPDAMKFIGRLGKILGPRGLMPSAKAGTVTT 147
Query: 235 DLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
D++ K ++ G +++ + K FG +G+ S+E L NLK + I +P
Sbjct: 148 DIVNAVKEIKAGKVEFRVDK------FGIVHNVVGKASFSKEDLFANLKAFYSAILKARP 201
Query: 294 PS 295
+
Sbjct: 202 AA 203
>gi|406927984|gb|EKD63899.1| hypothetical protein ACD_51C00155G0009 [uncultured bacterium]
Length = 232
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 53/225 (23%), Positives = 89/225 (39%), Gaps = 27/225 (12%)
Query: 94 RIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFD 153
+ + EA A +RET T ++ +TVE+ K V + H
Sbjct: 18 KFYLLDEACALVRETS-TTKFD-------STVEVHVNLSIDPAKAEQQLRSTVALPHGI- 68
Query: 154 HGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADL 213
G++ +IAF + + L G G + + IE+G + F I P ++ L
Sbjct: 69 -GKEVRVIAFVPEDKVKEALS-AGAIKAGSEELVAEIEKGWLE---FDTAIATPDMMKGL 123
Query: 214 MRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH--IGR 269
+I L ++ +P K+ T+ V++ ++ G K + D + H IG+
Sbjct: 124 GKIARTLGQKGLMPNPKAGTITVEVAKTVAEIKKG-KVEFRNDK------LCNLHNVIGK 176
Query: 270 LDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+ +L DNLK L + KP K FI I L + P
Sbjct: 177 VSFDGAKLSDNLKSYLKAVMENKP--KDVKGTFINSITLATTMGP 219
>gi|146421089|ref|XP_001486496.1| hypothetical protein PGUG_02167 [Meyerozyma guilliermondii ATCC
6260]
Length = 282
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 69/161 (42%), Gaps = 10/161 (6%)
Query: 156 EDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMR 215
+D S++ F + + + +G G D I+ I+ G + + F P I+ DL
Sbjct: 122 KDNSVMVFSLDEQVIEEAKKLGAKAAGGLDLIEQIKSGNLKLDGFTQCYATPDIVKDLKP 181
Query: 216 IRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMS 273
I L K +PT K T+ ++I + I+ ++ P +Q + IGR D S
Sbjct: 182 IARALGPKGLMPTPKRNTVSENIIQL-------IQDNLGALPFKQKDQHLLMPIGRCDFS 234
Query: 274 QEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
++ NLK + +PP + + I + +L S P
Sbjct: 235 DAEIIANLKAASEAVYGAQPPGT-KKPNLIGQAVLSSTMGP 274
>gi|371778558|ref|ZP_09484880.1| 50S ribosomal protein L1 [Anaerophaga sp. HS1]
Length = 232
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 76/172 (44%), Gaps = 23/172 (13%)
Query: 151 SFDHGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQF 202
+ HG + I + C+ + + + G VG + I+ I+ G ++TMP+
Sbjct: 65 TLPHGTGKEIRVLVLCTP-DKEEEAKAAGADYVGLDEYIEKIKGGWVDVDVIITMPS--- 120
Query: 203 VICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
V+ L ++ RGL+ P KS T+ +D+ K ++ G K D + +G
Sbjct: 121 VMAKVGALGRILGPRGLM----PNPKSGTVTMDIAKAVKEVKAG-----KIDFKVDKYGI 171
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+G++ E+L +N++ + I +KP S +I I L S SP
Sbjct: 172 VHSTVGKVSFPPEKLVENVREFVGVIQKLKPAS--AKGTYIKSIALSSTMSP 221
>gi|219871808|ref|YP_002476183.1| 50S ribosomal protein L1 [Haemophilus parasuis SH0165]
gi|254799851|sp|B8F7D3.1|RL1_HAEPS RecName: Full=50S ribosomal protein L1
gi|219692012|gb|ACL33235.1| 50S ribosomal protein L1 [Haemophilus parasuis SH0165]
Length = 229
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 69/148 (46%), Gaps = 21/148 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R+ +A +Q A + G LVG D + +++G + F VI +P D
Sbjct: 67 HGTGRTARVAVFTQGANAEAAKAAGADLVGMEDLAEQVKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKP 293
IG+ D S EQL++NL+ +LA + KP
Sbjct: 174 TIGKADFSPEQLKENLQALLAALVKAKP 201
>gi|347543085|ref|YP_004857723.1| 50S ribosomal protein L1 [Candidatus Arthromitus sp. SFB-rat-Yit]
gi|346986122|dbj|BAK81797.1| ribosomal protein L1 [Candidatus Arthromitus sp. SFB-rat-Yit]
Length = 228
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 79/174 (45%), Gaps = 15/174 (8%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G++ I+ F ++ + A + D G VGD + I I+ F ++ P ++ +
Sbjct: 67 GKNVKILVF-AKGDKAKEAIDSGADYVGDQELINKIQNE--NWFDFDIIVATPDMMGVVG 123
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
RI LL K +P KS T+ +D+ +++G ++Y + K IG+
Sbjct: 124 RIGKLLGPKGLMPNPKSGTVTLDISKTVSEIKSGKVEYRIDKT------AIIHVGIGKKT 177
Query: 272 MSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLI 325
S E L +N I++ I KP S +I + + S SP K+++S +I
Sbjct: 178 FSIESLLENFNTIMSAIIKSKPAS--SKGQYIKSVSVCSTMSPA-VKINISKII 228
>gi|401398391|ref|XP_003880297.1| ribosomal protein L1, related [Neospora caninum Liverpool]
gi|325114707|emb|CBZ50263.1| ribosomal protein L1, related [Neospora caninum Liverpool]
Length = 262
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 13/170 (7%)
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTM-PTFQFV 203
+ ++H G + + FC E A L +G G + I +G V T
Sbjct: 31 VCTLQHGV--GSNVRLAVFCPDEEAPAMLA-LGADYAGVDALLPRIAKGWVGFDKTLAVA 87
Query: 204 ICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYS 263
PK+L + R+ G +K +P+ KS T+ +L + ++ G + E D G
Sbjct: 88 SVMPKLL-KVARVLGP-RKLMPSPKSGTVVTNLSEAVRAVKQGEAVEFRA---EGDSGEV 142
Query: 264 DFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFIT----RILLW 309
+GR D QL +N+K ++ ++ +P S +D T R +W
Sbjct: 143 RVVVGRQDFEASQLLENIKCVVKEVLKARPRSSGTRQDEATQAFARSFVW 192
>gi|384449660|ref|YP_005662262.1| 50S ribosomal protein L1 [Chlamydophila pneumoniae LPCoLN]
gi|269302956|gb|ACZ33056.1| ribosomal protein L1 [Chlamydophila pneumoniae LPCoLN]
Length = 232
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ I+ F S ++ ++ G VG D ++ I+ G + F + P ++ ++
Sbjct: 70 GKTLRILVFASGNKVKEAVE-AGADFVGSDDLVEKIKSGWLE---FDVAVATPDMMREVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
++ +L R +PT K+ T+ D+ L+ G K K D G + +G+L
Sbjct: 126 KLGKVLGPRNLMPTPKTGTVTTDVAKAISELRKG-KIEFKADRA----GVCNVGVGKLSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
Q+++N++ + + + KPP+
Sbjct: 181 ESSQIKENIEALSSALIKAKPPA 203
>gi|282928875|ref|ZP_06336466.1| 50S ribosomal protein L1 [Staphylococcus aureus A10102]
gi|282589483|gb|EFB94572.1| 50S ribosomal protein L1 [Staphylococcus aureus A10102]
Length = 230
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ +S++ F + + A+ + G VG+++ ++ I++G F V+ P ++ ++
Sbjct: 70 GKSQSVLVFA-KGDKIAEAEAAGADYVGEAEYVQKIQQGWFG---FDVVVATPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKA------GIVHASIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
+ EQL +N + ++ KP S
Sbjct: 180 FTDEQLIENFNTLQDVLAKAKPSS 203
>gi|449464018|ref|XP_004149726.1| PREDICTED: 50S ribosomal protein L1, chloroplastic-like [Cucumis
sativus]
gi|449532743|ref|XP_004173340.1| PREDICTED: 50S ribosomal protein L1, chloroplastic-like [Cucumis
sativus]
Length = 356
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A +Q E + ++ G LVG D I+ I+ G + F +I +P ++ + + LL
Sbjct: 193 VAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMD---FDKLIASPDMMPKVASLGKLL 249
Query: 221 KKR--IPTLKSQTLGVDLI-GIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQL 277
R +P K+ T+ +L IA+ Q ++Y K G G+ + S+E L
Sbjct: 250 GPRGLMPNPKAGTVATNLPQAIAEFKQGKVEYRADKT------GIVHLPFGKANFSEEDL 303
Query: 278 EDNLKRILADISTMKP 293
NL + I T KP
Sbjct: 304 LINLLAAIKSIETNKP 319
>gi|320531941|ref|ZP_08032845.1| ribosomal protein L1 [Actinomyces sp. oral taxon 171 str. F0337]
gi|320135845|gb|EFW27889.1| ribosomal protein L1 [Actinomyces sp. oral taxon 171 str. F0337]
Length = 229
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/151 (23%), Positives = 69/151 (45%), Gaps = 17/151 (11%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S HG ++ + +Q E A Q G VG + I+ + +G F + P +
Sbjct: 64 SLPHGTGKTARVVVFAQGERAEQALAAGADEVGGDELIEKVAKGYTD---FDAAVATPDL 120
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
+ + R+ +L R +P ++ T+ +D+ ++ G I++ + + S+ H
Sbjct: 121 MGKVGRLGRVLGPRGLMPNPRTGTVTMDVAKAVSDIKGGRIEFRVDR--------ASNLH 172
Query: 267 --IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ S+EQL +N + L +I +KP +
Sbjct: 173 FIIGKASFSEEQLTENFQAALEEILRLKPST 203
>gi|408501661|ref|YP_006865580.1| 50S ribosomal protein L1 [Bifidobacterium asteroides PRL2011]
gi|408466485|gb|AFU72014.1| 50S ribosomal protein L1 [Bifidobacterium asteroides PRL2011]
Length = 229
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 101/248 (40%), Gaps = 54/248 (21%)
Query: 57 WTPDSKKKKDIYASRKVDESNLTYPEDDIYLQKDYKLRIFQFQEALAAIRETHHPTMYNL 116
T SKK ++ A+ KVD +NL PE+ I L K R F E + A+ Y L
Sbjct: 1 MTKRSKKYRE--AAEKVDRTNLYTPEEGIALLKSMPKR--GFDETVEAV--------YRL 48
Query: 117 ---PR---AFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSIIAFCSQHETA 170
PR + TV + T K V+ + F G + A E
Sbjct: 49 NVDPRKADQLVRGTVSLPNGTG-KTVRVL-----------VFARGPQATAAAEAGADE-- 94
Query: 171 AQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLK 228
VGD + + + G + F V+ P ++ + R+ +L R +P K
Sbjct: 95 ----------VGDDELVTKVAGGYLD---FDAVVATPDMMGKVGRLGRVLGPRGLMPNPK 141
Query: 229 SQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILAD 287
+ T+ +D+ ++ G I++ + K+ G F +G++ Q+ LE+N + +
Sbjct: 142 TGTVTMDVAKAVTEIKAGRIEFRVDKN------GNLSFPVGKVSFEQQALEENFHAVDEE 195
Query: 288 ISTMKPPS 295
I +KP +
Sbjct: 196 IKRLKPAT 203
>gi|256390121|ref|YP_003111685.1| 50S ribosomal protein L1 [Catenulispora acidiphila DSM 44928]
gi|256356347|gb|ACU69844.1| ribosomal protein L1 [Catenulispora acidiphila DSM 44928]
Length = 237
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 68/146 (46%), Gaps = 13/146 (8%)
Query: 154 HGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG ++ ++ F Q + A ++ G +VG + I + +G + F V+ P ++
Sbjct: 66 HGTGKTARVLVFA-QGDKAEAAREAGADIVGSDELIDEVAKGRLD---FDAVVATPDLMG 121
Query: 212 DLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGR 269
+ R+ +L R +P K+ T+ D+ ++ G K + D +F IG+
Sbjct: 122 KVGRLGRVLGPRSLMPNPKTGTVTADVAKAVNDIKGG-KIEFRADRHSN----LNFIIGK 176
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
+ S++QL +N L ++ +KP +
Sbjct: 177 VSFSEQQLAENYAAALEEVLRVKPSA 202
>gi|392397679|ref|YP_006434280.1| 50S ribosomal protein L1 [Flexibacter litoralis DSM 6794]
gi|390528757|gb|AFM04487.1| ribosomal protein L1 [Flexibacter litoralis DSM 6794]
Length = 232
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 60/127 (47%), Gaps = 10/127 (7%)
Query: 171 AQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLK 228
A+ ++ G +VG D I IE G M +I P ++A + R+ +L R +P K
Sbjct: 85 AEAKEAGADMVGLDDYIAKIESGWTDM---DVIITMPTVMAKVGRLGRVLGPRGLMPNPK 141
Query: 229 SQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADI 288
+ T+ +D+ ++ G K D + G +G+ + EQ+++N +LA +
Sbjct: 142 AGTVTMDVAKAVTDVKAG-----KIDFRVDKTGIIHASVGKSSFTAEQIKENASELLATL 196
Query: 289 STMKPPS 295
+KP +
Sbjct: 197 VRLKPAT 203
>gi|288926251|ref|ZP_06420176.1| ribosomal protein L1 [Prevotella buccae D17]
gi|315606517|ref|ZP_07881532.1| 50S ribosomal protein L1 [Prevotella buccae ATCC 33574]
gi|402304592|ref|ZP_10823659.1| ribosomal protein L1 [Prevotella sp. MSX73]
gi|288336942|gb|EFC75303.1| ribosomal protein L1 [Prevotella buccae D17]
gi|315251923|gb|EFU31897.1| 50S ribosomal protein L1 [Prevotella buccae ATCC 33574]
gi|400380868|gb|EJP33676.1| ribosomal protein L1 [Prevotella sp. MSX73]
Length = 230
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 27/151 (17%)
Query: 155 GEDRSIIAFCS--QHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICN 206
G+ ++A C+ Q E A + G VG + I+ I+ G ++TMP+ C
Sbjct: 70 GKVTRVLALCTPDQEEAA---KAAGADYVGLDEYIEKIKGGWTDIDVIITMPS-----CM 121
Query: 207 PKI--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSD 264
K+ L ++ RGL+ P KS T+ +D+ + ++ G K D + G
Sbjct: 122 GKVGPLGRVLGPRGLM----PNPKSGTVTMDVAKAVQEVKQG-----KIDFKVDKAGIIH 172
Query: 265 FHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+++MS +Q+ N K +A + +KP +
Sbjct: 173 TSIGKINMSADQIYGNAKEFIATVIKLKPAA 203
>gi|424841892|ref|ZP_18266517.1| ribosomal protein L1 [Saprospira grandis DSM 2844]
gi|395320090|gb|EJF53011.1| ribosomal protein L1 [Saprospira grandis DSM 2844]
Length = 230
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 68/143 (47%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+++ ++ FC+ + + ++ G G + I I+ G + V+ P ++A +
Sbjct: 70 GKEKKVLVFCTP-DKEQEAKEAGADYAGLQEYITKIQDGWTDV---DVVVAMPSVMAQVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
R+ +L R +P K+ T+ ++ + ++ G K S + D +G +GR+
Sbjct: 126 RLGRVLGPRGLMPNPKTGTVTPNVGDAVREIKKG-KTSFRVD----KYGIVHTSVGRVQF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
QL +N + ++ +S MKP S
Sbjct: 181 QPNQLVENAQEVIDTLSRMKPSS 203
>gi|400405242|ref|YP_006588101.1| 50S ribosomal protein L1 [secondary endosymbiont of Ctenarytaina
eucalypti]
gi|400363605|gb|AFP84673.1| ribosomal protein L1 [secondary endosymbiont of Ctenarytaina
eucalypti]
Length = 234
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 23/149 (15%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG RS+ +A +Q + A + G LVG D I++G F VI +P D
Sbjct: 67 HGTGRSVRVAVFTQGDNADAAKIAGADLVGMDDLADQIKKGNFN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
MRI G L + +P K T + +R+ +K + + ++ + H
Sbjct: 120 AMRIVGQLGQILGPRGLMPNPKVGT-------VTERVAEAVKNAKAGQVRYRNDKHGIIH 172
Query: 267 --IGRLDMSQEQLEDNLKRILADISTMKP 293
IG++D QL++NL+ +L + KP
Sbjct: 173 TTIGKVDFKSHQLKENLEALLVALKKAKP 201
>gi|167041786|gb|ABZ06528.1| putative ribosomal protein L1p/L10e family protein [uncultured
marine microorganism HF4000_093M11]
Length = 229
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G++ ++ F ++ + A QD G VG + K I+ G + F V+ P ++A +
Sbjct: 70 GKEVRVLVF-AKADKAIAAQDAGADYVGGEEYAKKIQEGWLE---FDRVVATPDMMAVVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
RI +L R +P K T+ ++ I K ++ G + + D Q G +G++
Sbjct: 126 RIGKILGPRGLMPNPKVGTVTFEVESIIKNIKAG-QVEFRADKQ----GNLHASVGKISF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
+++ +N+ ++ + MKP S
Sbjct: 181 DTDKICENVSALVDTVKRMKPSS 203
>gi|340785586|ref|YP_004751051.1| 50S ribosomal protein L1 [Collimonas fungivorans Ter331]
gi|340550853|gb|AEK60228.1| LSU ribosomal protein L1p (L10Ae) [Collimonas fungivorans Ter331]
Length = 231
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 61/142 (42%), Gaps = 20/142 (14%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A + E A Q + G +VG D + I+ G MP F VI +P D MRI G L
Sbjct: 75 VAVFASGEKAEQAKAAGADIVGMEDLAEQIKAG--NMP-FDIVIASP----DTMRIVGTL 127
Query: 221 ------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+ +P K T+ D+ K + G ++Y K G IGR S
Sbjct: 128 GQILGPRGLMPNPKVGTVTADVATAVKNAKAGQVQYRTDK------AGIVHATIGRKSFS 181
Query: 274 QEQLEDNLKRILADISTMKPPS 295
+L+ NL ++ +S KP +
Sbjct: 182 DAELKSNLLALIDALSKAKPAT 203
>gi|221483026|gb|EEE21350.1| 50S ribosomal protein L1p, putative [Toxoplasma gondii GT1]
Length = 489
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 71/170 (41%), Gaps = 13/170 (7%)
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTM-PTFQFV 203
+ ++H G + + FC E A L +G G + I +G V T
Sbjct: 200 VCTLQHGV--GSNVRLAVFCPDEEAPAMLA-LGADYAGVDALLPRIAKGWVGFDKTLAVA 256
Query: 204 ICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYS 263
PK+L + R+ G +K +P+ KS T+ +L + ++ G + E D G
Sbjct: 257 SVMPKLL-KVARVLGP-RKLMPSPKSGTVVTNLSEAVRAVKRGETVEFR---AEGDSGEV 311
Query: 264 DFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFIT----RILLW 309
+GR D QL +N+K ++ ++ +P S +D T R +W
Sbjct: 312 RIVVGRQDFEASQLLENIKCVVKEVLKARPRSSGARQDEATQAFARSFVW 361
>gi|420207041|ref|ZP_14712544.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM008]
gi|394276361|gb|EJE20702.1| ribosomal protein L1 [Staphylococcus epidermidis NIHLM008]
Length = 231
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 73/147 (49%), Gaps = 15/147 (10%)
Query: 154 HGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG +S ++ F + + + ++ G VG++D ++ I++G F V+ P ++
Sbjct: 67 HGTGKSQRVLVFA-KGDKITEAEEAGADYVGEADYVQKIQQGWFD---FDVVVATPDMMG 122
Query: 212 DLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIG 268
++ ++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG
Sbjct: 123 EVGKLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKA------GIVHALIG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPPS 295
++ +E+L DN + + ++ KP S
Sbjct: 177 KVSFDEEKLVDNFRTLQDVLAKAKPAS 203
>gi|242792484|ref|XP_002481963.1| mitochondrial 54S ribosomal protein MRPL1 [Talaromyces stipitatus
ATCC 10500]
gi|218718551|gb|EED17971.1| mitochondrial large ribosomal subunit protein L1, putative
[Talaromyces stipitatus ATCC 10500]
Length = 306
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 24/123 (19%)
Query: 175 DMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKIL-----ADLMRI---RGLLKKRIPT 226
+ G ++VG+ + + I++G++ F+ IC+ L A L RI RGL+ P+
Sbjct: 151 EAGASIVGEQEVFENIKKGIIE---FERCICHTDSLDALNKAGLGRILGPRGLM----PS 203
Query: 227 LKSQTLGVDLIGI-AKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRIL 285
+K+ T+ VD +GI + L+ G Y +E+D IG+L S +QL DNL+ L
Sbjct: 204 VKTGTV-VDDVGIRVQMLRGGTVY------RERD-AVIRMPIGQLGFSPDQLRDNLRAAL 255
Query: 286 ADI 288
+
Sbjct: 256 EQV 258
>gi|88812767|ref|ZP_01128013.1| 50S ribosomal protein L1 [Nitrococcus mobilis Nb-231]
gi|88790005|gb|EAR21126.1| 50S ribosomal protein L1 [Nitrococcus mobilis Nb-231]
Length = 231
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 38/185 (20%), Positives = 82/185 (44%), Gaps = 16/185 (8%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V HG +++ +A +Q A ++ G +VG D + I+ G + F
Sbjct: 57 QVVRGSTVLPHGTGKTVRVAVFAQGTNAESAKEAGADVVGMDDLAERIQGGELD---FGV 113
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQD 259
VI P + + R+ +L R +P + T+ D+ + + G ++Y +
Sbjct: 114 VIAAPDAMGVVGRLGRILGPRGLMPNPRVGTVTADVAAAVRNAKAGQVRYRTDRG----- 168
Query: 260 FGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKL 319
G +G++ QL+ NL+ ++ D++ +KP + ++ ++ + + P ++
Sbjct: 169 -GLIHCTLGKVTFEVAQLQQNLEALIGDLAKIKPAA--AKGVYLKKVTVSTTMGP-GLQV 224
Query: 320 DLSGL 324
DLS L
Sbjct: 225 DLSSL 229
>gi|257429956|ref|ZP_05606340.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 68-397]
gi|257279153|gb|EEV09754.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 68-397]
Length = 230
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ +S++ F + + A+ + G VG+++ ++ I++G F V+ P ++ ++
Sbjct: 70 GKSQSVLVFA-KGDKIAEAEAAGADYVGEAEYVQKIQQGWFD---FDVVVATPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG++
Sbjct: 126 KLGRVLGPKDLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKA------GIVHASIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
+ EQL +N + ++ KP S
Sbjct: 180 FTDEQLIENFNTLQDVLAKAKPSS 203
>gi|91200657|emb|CAJ73707.1| strongly similar to 50S ribosomal protein L1 [Candidatus Kuenenia
stuttgartiensis]
Length = 226
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 68/166 (40%), Gaps = 21/166 (12%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ +I F E A +D G VG D +K +E G F I P D+M
Sbjct: 70 GKSLKVIVFAVG-EKATIAKDAGAEEVGAEDLVKKVEGG---WGDFDVAISTP----DMM 121
Query: 215 RIRGLLKK------RIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIG 268
RI G L K ++P+ KS T+ D+ + + G K + D G G
Sbjct: 122 RIVGKLGKVLGPQGKMPSPKSGTVTDDVETAVREFKAG-KIEFRNDAG----GNVHAIAG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+L S L DN+ + I ++P + +I ++ L S SP
Sbjct: 177 KLSFSVADLADNINTFIKHILNLRPSA--AKGMYIEKVSLSSTMSP 220
>gi|315605091|ref|ZP_07880143.1| 50S ribosomal protein L1 [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315313198|gb|EFU61263.1| 50S ribosomal protein L1 [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 235
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 151 SFDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
S HG ++ ++ F A + D G VG + I+ + +G F + P
Sbjct: 64 SLPHGTGKTARVLVFAVGPR-AQEAIDAGADEVGGDELIEKVAKGYTD---FDVAVATPD 119
Query: 209 ILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
++ + R+ +L R +P K+ T+ +D+ K ++ G I++ + K F
Sbjct: 120 LMGKVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVKEIKGGRIEFRVDKHANLA------F 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G+ S EQL +N +L ++ +KP S
Sbjct: 174 IVGKASFSAEQLTENYAAVLDEVLRLKPSS 203
>gi|398348451|ref|ZP_10533154.1| 50S ribosomal protein L1 [Leptospira broomii str. 5399]
Length = 230
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 80/185 (43%), Gaps = 28/185 (15%)
Query: 123 ATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDR--SIIAFCS---QHETAAQLQDMG 177
T+EI+T + K ++ + S HG + ++ FC Q+E A G
Sbjct: 39 GTIEIATKVNYKSLQN-------IRGTISLPHGTGKLVRVLVFCKGDKQNEAKAA----G 87
Query: 178 VALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVD 235
VGD+D I+ + G F + P ++ D+ ++ +L ++ +P K+ T+ D
Sbjct: 88 AEFVGDADLIEKVAGGWTD---FDACVATPDMMKDVGKLGPILGRKGLMPKPKAGTVTND 144
Query: 236 LIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPP 294
+ L++G I+Y K G +G++ Q +L +N++ ++ + KP
Sbjct: 145 VTKAVGELKSGRIEYRPDKG------GVVHLGVGKVSFDQTKLVENIRTVVQTLLRDKPS 198
Query: 295 SKPED 299
D
Sbjct: 199 DAKGD 203
>gi|296119182|ref|ZP_06837752.1| ribosomal protein L1 [Corynebacterium ammoniagenes DSM 20306]
gi|295967808|gb|EFG81063.1| ribosomal protein L1 [Corynebacterium ammoniagenes DSM 20306]
Length = 238
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 86/194 (44%), Gaps = 20/194 (10%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V S HG + + +A ++ E A + + G +VG + ++ I G + F
Sbjct: 57 QLVRGTVSLPHGTGKDVRVAVFAEGEKATEAAEAGADIVGTEELLEAINGGNLD---FDV 113
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
I P +A + R+ +L R +P K+ T+ D+ ++ G K S + D
Sbjct: 114 AIATPDQMAKVGRVARVLGPRGLMPNPKTGTVTNDVAKAVADVKGG-KISFRVDKA---- 168
Query: 261 GYSDFH--IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFK 318
++ H IG+ E+L +N +L ++ +KP S ++ ++ L + P
Sbjct: 169 --ANLHAMIGKASFDAEKLAENYGALLDELMRIKPSS--SKGIYLRKVTLSTTNGP---G 221
Query: 319 LDLSGLIEKPKAKE 332
+ + G ++K A+E
Sbjct: 222 IPVDGSVQKGYAEE 235
>gi|242792489|ref|XP_002481964.1| mitochondrial 54S ribosomal protein MRPL1 [Talaromyces stipitatus
ATCC 10500]
gi|218718552|gb|EED17972.1| mitochondrial large ribosomal subunit protein L1, putative
[Talaromyces stipitatus ATCC 10500]
Length = 296
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 64/123 (52%), Gaps = 24/123 (19%)
Query: 175 DMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKIL-----ADLMRI---RGLLKKRIPT 226
+ G ++VG+ + + I++G++ F+ IC+ L A L RI RGL+ P+
Sbjct: 151 EAGASIVGEQEVFENIKKGIIE---FERCICHTDSLDALNKAGLGRILGPRGLM----PS 203
Query: 227 LKSQTLGVDLIGI-AKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRIL 285
+K+ T+ VD +GI + L+ G Y +E+D IG+L S +QL DNL+ L
Sbjct: 204 VKTGTV-VDDVGIRVQMLRGGTVY------RERD-AVIRMPIGQLGFSPDQLRDNLRAAL 255
Query: 286 ADI 288
+
Sbjct: 256 EQV 258
>gi|15923528|ref|NP_371062.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus Mu50]
gi|21282222|ref|NP_645310.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus MW2]
gi|49485403|ref|YP_042624.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57651414|ref|YP_185470.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus COL]
gi|82750246|ref|YP_415987.1| 50S ribosomal protein L1 [Staphylococcus aureus RF122]
gi|87162295|ref|YP_493226.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194300|ref|YP_499092.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|148266998|ref|YP_001245941.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus JH9]
gi|150393045|ref|YP_001315720.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus JH1]
gi|151220712|ref|YP_001331534.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156978867|ref|YP_001441126.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus Mu3]
gi|161508778|ref|YP_001574437.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|221141025|ref|ZP_03565518.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253315648|ref|ZP_04838861.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253731143|ref|ZP_04865308.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253732546|ref|ZP_04866711.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
TCH130]
gi|255005332|ref|ZP_05143933.2| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|257424652|ref|ZP_05601079.1| LSU ribosomal protein L1 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427320|ref|ZP_05603719.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 65-1322]
gi|257432658|ref|ZP_05609018.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus E1410]
gi|257435562|ref|ZP_05611610.1| LSU ribosomal protein L1 [Staphylococcus aureus subsp. aureus M876]
gi|257795363|ref|ZP_05644342.1| 50S ribosomal protein L1 [Staphylococcus aureus A9781]
gi|258408950|ref|ZP_05681231.1| 50S ribosomal protein L1 [Staphylococcus aureus A9763]
gi|258420412|ref|ZP_05683355.1| LSU ribosomal protein L1 [Staphylococcus aureus A9719]
gi|258422615|ref|ZP_05685521.1| LSU ribosomal protein L1 [Staphylococcus aureus A9635]
gi|258439333|ref|ZP_05690265.1| ribosomal protein L1 [Staphylococcus aureus A9299]
gi|258444073|ref|ZP_05692410.1| ribosomal protein L1 [Staphylococcus aureus A8115]
gi|258446341|ref|ZP_05694499.1| 50S ribosomal protein L1 [Staphylococcus aureus A6300]
gi|258448434|ref|ZP_05696549.1| LSU ribosomal protein L1P [Staphylococcus aureus A6224]
gi|258452729|ref|ZP_05700727.1| LSU ribosomal protein L1P [Staphylococcus aureus A5948]
gi|258453790|ref|ZP_05701764.1| 50S ribosomal protein L1 [Staphylococcus aureus A5937]
gi|262049581|ref|ZP_06022450.1| 50S ribosomal protein L1 [Staphylococcus aureus D30]
gi|262052426|ref|ZP_06024626.1| 50S ribosomal protein L1 [Staphylococcus aureus 930918-3]
gi|269202161|ref|YP_003281430.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus ED98]
gi|282894973|ref|ZP_06303196.1| 50S ribosomal protein L1 [Staphylococcus aureus A8117]
gi|282910179|ref|ZP_06317983.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus WBG10049]
gi|282913371|ref|ZP_06321160.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus M899]
gi|282915861|ref|ZP_06323626.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus D139]
gi|282918326|ref|ZP_06326063.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus C427]
gi|282923288|ref|ZP_06330968.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus C101]
gi|282924452|ref|ZP_06332124.1| 50S ribosomal protein L1 [Staphylococcus aureus A9765]
gi|283769694|ref|ZP_06342586.1| large subunit ribosomal protein L1 [Staphylococcus aureus subsp.
aureus H19]
gi|284023548|ref|ZP_06377946.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus 132]
gi|293500417|ref|ZP_06666268.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
58-424]
gi|293509362|ref|ZP_06668073.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus M809]
gi|293523949|ref|ZP_06670636.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus M1015]
gi|294850314|ref|ZP_06791048.1| 50S ribosomal protein L1 [Staphylococcus aureus A9754]
gi|295406915|ref|ZP_06816718.1| 50S ribosomal protein L1 [Staphylococcus aureus A8819]
gi|296275784|ref|ZP_06858291.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus MR1]
gi|297208748|ref|ZP_06925176.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297246261|ref|ZP_06930110.1| 50S ribosomal protein L1 [Staphylococcus aureus A8796]
gi|300912838|ref|ZP_07130280.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
TCH70]
gi|304381863|ref|ZP_07364510.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|379013820|ref|YP_005290056.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus VC40]
gi|379020309|ref|YP_005296971.1| 50S ribosomal protein L1p (L10Ae) [Staphylococcus aureus subsp.
aureus M013]
gi|384546818|ref|YP_005736071.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
ED133]
gi|384549402|ref|YP_005738654.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
JKD6159]
gi|384861200|ref|YP_005743920.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|384863867|ref|YP_005749226.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus ECT-R
2]
gi|384868537|ref|YP_005748733.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
TCH60]
gi|384869123|ref|YP_005751837.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
T0131]
gi|385780804|ref|YP_005756975.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
11819-97]
gi|386728296|ref|YP_006194679.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
71193]
gi|386830182|ref|YP_006236836.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus HO
5096 0412]
gi|387142228|ref|YP_005730621.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus TW20]
gi|387149700|ref|YP_005741264.1| 50S ribosomalprotein L1p (L10Ae) [Staphylococcus aureus 04-02981]
gi|387601892|ref|YP_005733413.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus ST398]
gi|387779678|ref|YP_005754476.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
LGA251]
gi|404477926|ref|YP_006709356.1| 50S ribosomal protein L1 [Staphylococcus aureus 08BA02176]
gi|415688896|ref|ZP_11452411.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
CGS01]
gi|415694013|ref|ZP_11455618.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
CGS03]
gi|416846012|ref|ZP_11906355.1| 50S ribosomal protein L1 [Staphylococcus aureus O46]
gi|417648390|ref|ZP_12298216.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21189]
gi|417650811|ref|ZP_12300576.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21172]
gi|417654135|ref|ZP_12303862.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21193]
gi|417796767|ref|ZP_12443971.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21305]
gi|417798481|ref|ZP_12445647.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21310]
gi|417801380|ref|ZP_12448473.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21318]
gi|417890370|ref|ZP_12534447.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21200]
gi|417893591|ref|ZP_12537617.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21201]
gi|417899769|ref|ZP_12543670.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21259]
gi|417902173|ref|ZP_12546042.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21266]
gi|417902871|ref|ZP_12546732.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21269]
gi|418279375|ref|ZP_12892738.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21178]
gi|418282576|ref|ZP_12895341.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21202]
gi|418286168|ref|ZP_12898819.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21209]
gi|418308142|ref|ZP_12919795.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21194]
gi|418310618|ref|ZP_12922154.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21331]
gi|418312768|ref|ZP_12924276.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21334]
gi|418315267|ref|ZP_12926731.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21340]
gi|418318094|ref|ZP_12929508.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21232]
gi|418320348|ref|ZP_12931709.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus VCU006]
gi|418426654|ref|ZP_12999680.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus VRS2]
gi|418429580|ref|ZP_13002511.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|418432475|ref|ZP_13005275.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus VRS4]
gi|418436189|ref|ZP_13008006.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus VRS5]
gi|418439088|ref|ZP_13010809.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus VRS6]
gi|418442068|ref|ZP_13013685.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus VRS7]
gi|418445196|ref|ZP_13016687.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus VRS8]
gi|418448136|ref|ZP_13019541.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus VRS9]
gi|418450960|ref|ZP_13022302.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
VRS10]
gi|418453977|ref|ZP_13025250.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|418456881|ref|ZP_13028096.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|418559637|ref|ZP_13124172.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21252]
gi|418561556|ref|ZP_13126044.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21262]
gi|418566760|ref|ZP_13131128.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21272]
gi|418569672|ref|ZP_13133991.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21283]
gi|418573350|ref|ZP_13137544.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21333]
gi|418578429|ref|ZP_13142524.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1114]
gi|418599352|ref|ZP_13162841.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21343]
gi|418639534|ref|ZP_13201779.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-3]
gi|418642033|ref|ZP_13204234.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-24]
gi|418643843|ref|ZP_13205998.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-55]
gi|418646200|ref|ZP_13208311.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-88]
gi|418651252|ref|ZP_13213260.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-91]
gi|418654865|ref|ZP_13216758.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-99]
gi|418656951|ref|ZP_13218735.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-105]
gi|418658731|ref|ZP_13220440.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-111]
gi|418662542|ref|ZP_13224086.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-122]
gi|418871561|ref|ZP_13425937.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-125]
gi|418874556|ref|ZP_13428822.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIGC93]
gi|418877388|ref|ZP_13431627.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1165]
gi|418880245|ref|ZP_13434465.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1213]
gi|418883172|ref|ZP_13437372.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1769]
gi|418885832|ref|ZP_13439982.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1150]
gi|418888438|ref|ZP_13442575.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1524]
gi|418893998|ref|ZP_13448099.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1057]
gi|418902802|ref|ZP_13456843.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1770]
gi|418905094|ref|ZP_13459123.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIGC345D]
gi|418911207|ref|ZP_13465190.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG547]
gi|418913729|ref|ZP_13467702.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIGC340D]
gi|418919354|ref|ZP_13473300.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIGC348]
gi|418924766|ref|ZP_13478669.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG2018]
gi|418927853|ref|ZP_13481739.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1612]
gi|418930568|ref|ZP_13484416.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1750]
gi|418933469|ref|ZP_13487293.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIGC128]
gi|418949174|ref|ZP_13501433.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-157]
gi|418950137|ref|ZP_13502339.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-160]
gi|418954702|ref|ZP_13506658.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-189]
gi|418980351|ref|ZP_13528134.1| LSU ribosomal protein L1P [Staphylococcus aureus subsp. aureus
DR10]
gi|418987438|ref|ZP_13535111.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1835]
gi|418990432|ref|ZP_13538093.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1096]
gi|418993252|ref|ZP_13540891.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG290]
gi|419774836|ref|ZP_14300790.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CO-23]
gi|419785943|ref|ZP_14311687.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-M]
gi|421149302|ref|ZP_15608960.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|422744674|ref|ZP_16798629.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus MRSA177]
gi|422745090|ref|ZP_16799036.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus MRSA131]
gi|424775957|ref|ZP_18202944.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CM05]
gi|424784392|ref|ZP_18211202.1| LSU ribosomal protein L1p (L10Ae) [Staphylococcus aureus CN79]
gi|440707560|ref|ZP_20888255.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21282]
gi|440734013|ref|ZP_20913626.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus DSM
20231]
gi|443637204|ref|ZP_21121289.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21236]
gi|443638299|ref|ZP_21122346.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21196]
gi|448741480|ref|ZP_21723444.1| 50S ribosomal protein L1 [Staphylococcus aureus KT/314250]
gi|448743992|ref|ZP_21725897.1| 50S ribosomal protein L1 [Staphylococcus aureus KT/Y21]
gi|54039108|sp|P66092.1|RL1_STAAW RecName: Full=50S ribosomal protein L1
gi|54041602|sp|P66091.1|RL1_STAAM RecName: Full=50S ribosomal protein L1
gi|61215544|sp|Q6GBU9.1|RL1_STAAS RecName: Full=50S ribosomal protein L1
gi|81695155|sp|Q5HID7.1|RL1_STAAC RecName: Full=50S ribosomal protein L1
gi|91207380|sp|Q2YSC3.1|RL1_STAAB RecName: Full=50S ribosomal protein L1
gi|122540134|sp|Q2G0P0.1|RL1_STAA8 RecName: Full=50S ribosomal protein L1
gi|123487077|sp|Q2FJA2.1|RL1_STAA3 RecName: Full=50S ribosomal protein L1
gi|166219591|sp|A7WYW1.1|RL1_STAA1 RecName: Full=50S ribosomal protein L1
gi|172048775|sp|A6QEJ0.1|RL1_STAAE RecName: Full=50S ribosomal protein L1
gi|189041841|sp|A6TZ15.1|RL1_STAA2 RecName: Full=50S ribosomal protein L1
gi|189041842|sp|A5IQ92.1|RL1_STAA9 RecName: Full=50S ribosomal protein L1
gi|189041843|sp|A8YZN6.1|RL1_STAAT RecName: Full=50S ribosomal protein L1
gi|14246306|dbj|BAB56700.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus Mu50]
gi|21203658|dbj|BAB94358.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus MW2]
gi|49243846|emb|CAG42271.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
MSSA476]
gi|57285600|gb|AAW37694.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus COL]
gi|82655777|emb|CAI80177.1| 50S ribosomal protein L1 [Staphylococcus aureus RF122]
gi|87128269|gb|ABD22783.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201858|gb|ABD29668.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|147740067|gb|ABQ48365.1| LSU ribosomal protein L1P [Staphylococcus aureus subsp. aureus JH9]
gi|149945497|gb|ABR51433.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus JH1]
gi|150373512|dbj|BAF66772.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus str.
Newman]
gi|156721002|dbj|BAF77419.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus Mu3]
gi|160367587|gb|ABX28558.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253725108|gb|EES93837.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253729475|gb|EES98204.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
TCH130]
gi|257272222|gb|EEV04345.1| LSU ribosomal protein L1 [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275513|gb|EEV06986.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 65-1322]
gi|257282073|gb|EEV12208.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus E1410]
gi|257284753|gb|EEV14872.1| LSU ribosomal protein L1 [Staphylococcus aureus subsp. aureus M876]
gi|257789335|gb|EEV27675.1| 50S ribosomal protein L1 [Staphylococcus aureus A9781]
gi|257840301|gb|EEV64764.1| 50S ribosomal protein L1 [Staphylococcus aureus A9763]
gi|257843602|gb|EEV68008.1| LSU ribosomal protein L1 [Staphylococcus aureus A9719]
gi|257847187|gb|EEV71195.1| LSU ribosomal protein L1 [Staphylococcus aureus A9635]
gi|257847670|gb|EEV71669.1| ribosomal protein L1 [Staphylococcus aureus A9299]
gi|257850743|gb|EEV74688.1| ribosomal protein L1 [Staphylococcus aureus A8115]
gi|257854935|gb|EEV77880.1| 50S ribosomal protein L1 [Staphylococcus aureus A6300]
gi|257858303|gb|EEV81190.1| LSU ribosomal protein L1P [Staphylococcus aureus A6224]
gi|257859602|gb|EEV82452.1| LSU ribosomal protein L1P [Staphylococcus aureus A5948]
gi|257864046|gb|EEV86800.1| 50S ribosomal protein L1 [Staphylococcus aureus A5937]
gi|259159672|gb|EEW44716.1| 50S ribosomal protein L1 [Staphylococcus aureus 930918-3]
gi|259162321|gb|EEW46894.1| 50S ribosomal protein L1 [Staphylococcus aureus D30]
gi|262074451|gb|ACY10424.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus ED98]
gi|269940111|emb|CBI48487.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus TW20]
gi|282314156|gb|EFB44546.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus C101]
gi|282317460|gb|EFB47832.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus C427]
gi|282320157|gb|EFB50502.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus D139]
gi|282322403|gb|EFB52725.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus M899]
gi|282325571|gb|EFB55879.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus WBG10049]
gi|282592863|gb|EFB97867.1| 50S ribosomal protein L1 [Staphylococcus aureus A9765]
gi|282762655|gb|EFC02792.1| 50S ribosomal protein L1 [Staphylococcus aureus A8117]
gi|283459841|gb|EFC06931.1| large subunit ribosomal protein L1 [Staphylococcus aureus subsp.
aureus H19]
gi|283469830|emb|CAQ49041.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus ST398]
gi|285816239|gb|ADC36726.1| LSU ribosomal protein L1p (L10Ae) [Staphylococcus aureus 04-02981]
gi|290920912|gb|EFD97973.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus M1015]
gi|291095422|gb|EFE25683.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
58-424]
gi|291467459|gb|EFF09974.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus M809]
gi|294822826|gb|EFG39261.1| 50S ribosomal protein L1 [Staphylococcus aureus A9754]
gi|294968146|gb|EFG44172.1| 50S ribosomal protein L1 [Staphylococcus aureus A8819]
gi|296886693|gb|EFH25598.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|297176859|gb|EFH36117.1| 50S ribosomal protein L1 [Staphylococcus aureus A8796]
gi|298693869|gb|ADI97091.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus ED133]
gi|300885942|gb|EFK81145.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
TCH70]
gi|302332251|gb|ADL22444.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
JKD6159]
gi|302750429|gb|ADL64606.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus str.
JKD6008]
gi|304339649|gb|EFM05596.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|312439042|gb|ADQ78113.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
TCH60]
gi|312829034|emb|CBX33876.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315128831|gb|EFT84830.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
CGS03]
gi|315196650|gb|EFU26997.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
CGS01]
gi|320141597|gb|EFW33436.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus MRSA131]
gi|320141774|gb|EFW33602.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus MRSA177]
gi|323443090|gb|EGB00710.1| 50S ribosomal protein L1 [Staphylococcus aureus O46]
gi|329313258|gb|AEB87671.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
T0131]
gi|329727933|gb|EGG64382.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21172]
gi|329731053|gb|EGG67426.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21189]
gi|329731949|gb|EGG68305.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21193]
gi|334268153|gb|EGL86598.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21305]
gi|334275811|gb|EGL94086.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21310]
gi|334276906|gb|EGL95149.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21318]
gi|341843768|gb|EGS84989.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21266]
gi|341844377|gb|EGS85594.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21259]
gi|341850490|gb|EGS91608.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21269]
gi|341854362|gb|EGS95233.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21201]
gi|341855097|gb|EGS95951.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21200]
gi|344176780|emb|CCC87242.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
LGA251]
gi|359829618|gb|AEV77596.1| LSU ribosomal protein L1p (L10Ae) [Staphylococcus aureus subsp.
aureus M013]
gi|364521793|gb|AEW64543.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 11819-97]
gi|365167722|gb|EHM59099.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21209]
gi|365169577|gb|EHM60823.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21202]
gi|365170709|gb|EHM61670.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21178]
gi|365227534|gb|EHM68728.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus VCU006]
gi|365236322|gb|EHM77218.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21331]
gi|365237682|gb|EHM78527.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21334]
gi|365241622|gb|EHM82366.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21194]
gi|365243897|gb|EHM84565.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21340]
gi|365244335|gb|EHM84996.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21232]
gi|371974480|gb|EHO91810.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21252]
gi|371977413|gb|EHO94684.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21262]
gi|371981715|gb|EHO98877.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21333]
gi|371983505|gb|EHP00647.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21272]
gi|371985484|gb|EHP02552.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21283]
gi|374362517|gb|AEZ36622.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus VC40]
gi|374397459|gb|EHQ68669.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21343]
gi|375014262|gb|EHS07954.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-99]
gi|375017174|gb|EHS10796.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-3]
gi|375017810|gb|EHS11413.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-24]
gi|375026158|gb|EHS19544.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-91]
gi|375027269|gb|EHS20634.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-55]
gi|375031951|gb|EHS25211.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-105]
gi|375033400|gb|EHS26593.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-88]
gi|375036041|gb|EHS29128.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-122]
gi|375037631|gb|EHS30650.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-111]
gi|375368114|gb|EHS72041.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-125]
gi|375369618|gb|EHS73491.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-157]
gi|375372467|gb|EHS76207.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-189]
gi|375377661|gb|EHS81112.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-160]
gi|377696096|gb|EHT20452.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1165]
gi|377696456|gb|EHT20811.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1114]
gi|377698346|gb|EHT22694.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1057]
gi|377716285|gb|EHT40468.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1769]
gi|377716435|gb|EHT40617.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1750]
gi|377719226|gb|EHT43396.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1835]
gi|377722554|gb|EHT46679.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1096]
gi|377724585|gb|EHT48700.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG547]
gi|377727130|gb|EHT51237.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1150]
gi|377732683|gb|EHT56733.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1213]
gi|377737765|gb|EHT61774.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1612]
gi|377741817|gb|EHT65802.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1770]
gi|377746061|gb|EHT70032.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG2018]
gi|377747215|gb|EHT71181.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG290]
gi|377754890|gb|EHT78795.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1524]
gi|377758335|gb|EHT82220.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIGC340D]
gi|377766634|gb|EHT90467.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIGC345D]
gi|377767319|gb|EHT91117.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIGC348]
gi|377771249|gb|EHT95003.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIGC128]
gi|377771896|gb|EHT95649.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIGC93]
gi|379991879|gb|EIA13341.1| LSU ribosomal protein L1P [Staphylococcus aureus subsp. aureus
DR10]
gi|383361752|gb|EID39118.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus IS-M]
gi|383971337|gb|EID87415.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CO-23]
gi|384229589|gb|AFH68836.1| LSU ribosomal protein L1P [Staphylococcus aureus subsp. aureus
71193]
gi|385195574|emb|CCG15183.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus HO
5096 0412]
gi|387720927|gb|EIK08818.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
VRS3a]
gi|387721092|gb|EIK08979.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus VRS2]
gi|387727541|gb|EIK15054.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus VRS4]
gi|387729549|gb|EIK16984.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus VRS5]
gi|387731589|gb|EIK18871.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus VRS6]
gi|387738392|gb|EIK25435.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus VRS8]
gi|387739643|gb|EIK26639.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus VRS9]
gi|387739805|gb|EIK26788.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus VRS7]
gi|387746908|gb|EIK33628.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
VRS10]
gi|387748318|gb|EIK35007.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
VRS11a]
gi|387749123|gb|EIK35767.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
VRS11b]
gi|394330219|gb|EJE56311.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus str.
Newbould 305]
gi|402346736|gb|EJU81813.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CM05]
gi|404439415|gb|AFR72608.1| 50S ribosomal protein L1 [Staphylococcus aureus 08BA02176]
gi|408422966|emb|CCJ10377.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
ST228]
gi|408424954|emb|CCJ12341.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
ST228]
gi|408426943|emb|CCJ14306.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
ST228]
gi|408428931|emb|CCJ26096.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
ST228]
gi|408430919|emb|CCJ18234.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
ST228]
gi|408432913|emb|CCJ20198.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
ST228]
gi|408434902|emb|CCJ22162.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
ST228]
gi|408436887|emb|CCJ24130.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
ST228]
gi|421956991|gb|EKU09315.1| LSU ribosomal protein L1p (L10Ae) [Staphylococcus aureus CN79]
gi|436431908|gb|ELP29260.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus DSM
20231]
gi|436505882|gb|ELP41741.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21282]
gi|443406082|gb|ELS64667.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21236]
gi|443409736|gb|ELS68228.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21196]
gi|445547781|gb|ELY16043.1| 50S ribosomal protein L1 [Staphylococcus aureus KT/314250]
gi|445562731|gb|ELY18897.1| 50S ribosomal protein L1 [Staphylococcus aureus KT/Y21]
Length = 230
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ +S++ F + + A+ + G VG+++ ++ I++G F V+ P ++ ++
Sbjct: 70 GKSQSVLVFA-KGDKIAEAEAAGADYVGEAEYVQKIQQGWFD---FDVVVATPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKA------GIVHASIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
+ EQL +N + ++ KP S
Sbjct: 180 FTDEQLIENFNTLQDVLAKAKPSS 203
>gi|27380525|ref|NP_772054.1| 50S ribosomal protein L1 [Bradyrhizobium japonicum USDA 110]
gi|33301443|sp|Q89J70.1|RL1_BRAJA RecName: Full=50S ribosomal protein L1
gi|27353689|dbj|BAC50679.1| 50S ribosomal protein L1 [Bradyrhizobium japonicum USDA 110]
Length = 230
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
+ +G R++ + ++ A + + G +VG D ++ ++ G + F I P +
Sbjct: 63 TLPNGTGRTLRVGVFARGAKADEAKAAGADVVGAEDLVEKVQNGSID---FDRCIATPDM 119
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
+ + R+ +L R +P K T+ +D+ G K + G +++ ++K G
Sbjct: 120 MPLVGRLGKVLGPRGLMPNPKIGTVTMDVTGAVKGAKGGSVEFRVEK------AGILQAG 173
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+G+ S+E+L +N+K + +S KP +I R+ + S P
Sbjct: 174 VGKASFSEEKLVENIKALADAVSKAKPAG--SKGTYIQRVAVSSTMGP 219
>gi|313664994|ref|YP_004046865.1| 50S ribosomal protein L1 [Mycoplasma leachii PG50]
gi|392388592|ref|YP_005907001.1| 50S ribosomal protein L1 [Mycoplasma leachii 99/014/6]
gi|312949191|gb|ADR23787.1| ribosomal protein L1 [Mycoplasma leachii PG50]
gi|339276237|emb|CBV66816.1| 50S ribosomal protein L1 [Mycoplasma leachii 99/014/6]
Length = 226
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Query: 200 FQFVICNPKILADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQ 256
F ++ P+++A L I +L K +P K+ T+ +D+ ++ G ++Y K+
Sbjct: 111 FDIIVATPEMMAKLGAIGKILGPKGLMPNPKTGTVTIDVAKAVDDIKKGKVEYRADKE-- 168
Query: 257 EQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
G IG++ E+LE+N K ++ +I +KP + D+I I L + P
Sbjct: 169 ----GNIHLIIGKVSFESEKLEENFKAVIDEIRRVKPQT--VKGDYIKNITLSTTMGP 220
>gi|384218064|ref|YP_005609230.1| 50S ribosomal protein L1 [Bradyrhizobium japonicum USDA 6]
gi|354956963|dbj|BAL09642.1| 50S ribosomal protein L1 [Bradyrhizobium japonicum USDA 6]
Length = 230
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
+ +G R++ + ++ A + + G +VG D ++ ++ G + F I P +
Sbjct: 63 TLPNGTGRTLRVGVFARGAKADEAKAAGADVVGAEDLVEKVQNGSID---FDRCIATPDM 119
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
+ + R+ +L R +P K T+ +D+ G K + G +++ ++K G
Sbjct: 120 MPLVGRLGKVLGPRGLMPNPKIGTVTMDVTGAVKGAKGGSVEFRVEK------AGILQAG 173
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+G+ S+E+L +N+K + +S KP +I R+ + S P
Sbjct: 174 VGKASFSEEKLVENIKALADAVSKAKPAG--SKGTYIQRVAVSSTMGP 219
>gi|220904898|ref|YP_002480210.1| 50S ribosomal protein L1 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254799844|sp|B8J1A5.1|RL1_DESDA RecName: Full=50S ribosomal protein L1
gi|219869197|gb|ACL49532.1| ribosomal protein L1 [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 235
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 14/170 (8%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ + FC + E A+ ++ G +VG D + ++ G + F + P ++A +
Sbjct: 70 GKTVRVAVFC-KGEKQAEAREAGADIVGAEDLVAEVKAGNLN---FDAAVATPDVMALVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
+I LL R +P K+ ++ D+ L+ G + D + G +G+
Sbjct: 126 QIGRLLGPRGLMPNAKTGSVTFDVAKAVSELKAG-----RVDFKVDKAGVLHAPLGKASF 180
Query: 273 SQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLS 322
E++ NLK +L ++ +KP S ++ + + + P FK+D++
Sbjct: 181 GPEKILGNLKALLDTVNRLKPSS--AKGTYLISMAISTTMGP-GFKVDMT 227
>gi|120402248|ref|YP_952077.1| 50S ribosomal protein L1 [Mycobacterium vanbaalenii PYR-1]
gi|160166284|sp|A1T4H1.1|RL1_MYCVP RecName: Full=50S ribosomal protein L1
gi|119955066|gb|ABM12071.1| LSU ribosomal protein L1P [Mycobacterium vanbaalenii PYR-1]
Length = 235
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG ++ +A + + A Q + G +VG D I+ I+ G + F I P +A
Sbjct: 67 HGTGKTARVAVFAVGDKAEQAEAAGADIVGSDDLIEKIQGGFLD---FDAAIATPDQMAK 123
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ RI +L R +P K+ T+ D+ ++ G K + + D Q F IG+
Sbjct: 124 VGRIARILGPRGLMPNPKTGTVTPDVAKAVSDIKGG-KINFRVDKQAN----LHFVIGKA 178
Query: 271 DMSQEQLEDNLKRILADISTMKPPS 295
+ +L +N L ++ KP S
Sbjct: 179 SFDESKLAENYGAALDEVLRAKPSS 203
>gi|15926216|ref|NP_373749.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus N315]
gi|33301584|sp|Q99W68.1|RL1_STAAN RecName: Full=50S ribosomal protein L1
gi|13700429|dbj|BAB41727.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus N315]
Length = 230
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ +S++ F + + A+ + G VG+++ ++ I++G F V+ P ++ ++
Sbjct: 70 GKSQSVLVFA-KGDKIAEAEAAGTDYVGEAEYVQKIQQGWFD---FDVVVATPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKA------GIVHASIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
+ EQL +N + ++ KP S
Sbjct: 180 FTDEQLIENFNTLQDVLAKAKPSS 203
>gi|297182722|gb|ADI18878.1| ribosomal protein l1 [uncultured Pseudomonadales bacterium
HF0010_05E14]
Length = 231
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 23/179 (12%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V + +G ++I + +Q ++A + G LVG D I +G F
Sbjct: 57 QVVRGATTLPNGSGKAIRVCVFAQGDSAEDAKKAGAELVGMDDLSAEISKG---RSDFDV 113
Query: 203 VICNPKILADLMRIRGLLKKRI------PTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDP 255
VI +P D MRI G L K + P KS T+ D+ K + G ++Y K+
Sbjct: 114 VIASP----DSMRIVGTLGKVLGPRGLMPNPKSGTVTKDVGQAVKNAKAGQVRYRADKN- 168
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
G IG + +L+ NL+ +L D+ KP + +I +I + S P
Sbjct: 169 -----GIIHGGIGTTKFKEVELKQNLEAVLGDLIKSKPST--AKGIYIKKITVSSTMGP 220
>gi|408907670|emb|CCM11251.1| LSU ribosomal protein L1p (L10Ae) [Helicobacter heilmannii ASB1.4]
Length = 233
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG + + +A ++ + ++ G +VG D + I+ G F VI P ++A
Sbjct: 67 HGTGKKVRVAVFAKDVKLDEAREAGADVVGGEDLAEEIKNG---NTNFDMVIATPDMMAV 123
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDL---IGIAKRLQTGIKYSMKKDPQEQDFGYSDFH- 266
+ ++ +L K +P K+ T+ +D+ + AK Q + K + H
Sbjct: 124 VGKVGRILGPKGLMPNPKTGTVTMDIKKAVSNAKSGQVNFRVDKK----------GNLHA 173
Query: 267 -IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ QEQL+DN+ ++ I+ +KP +
Sbjct: 174 PIGKASFKQEQLQDNMLELVRAINRLKPST 203
>gi|416840772|ref|ZP_11903959.1| 50S ribosomal protein L1 [Staphylococcus aureus O11]
gi|323439808|gb|EGA97525.1| 50S ribosomal protein L1 [Staphylococcus aureus O11]
Length = 230
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ +S++ F + + A+ + G VG+++ ++ I++G F V+ P ++ ++
Sbjct: 70 GKSQSVLVFA-KGDKIAEAEAAGADYVGEAEYVQKIQQGWFD---FDVVVATPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKA------GIVHASIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
+ EQL +N + ++ KP S
Sbjct: 180 FTDEQLIENFNTLQDVLAKAKPSS 203
>gi|229142904|ref|ZP_04271345.1| 50S ribosomal protein L1 [Bacillus cereus BDRD-ST24]
gi|228640525|gb|EEK96914.1| 50S ribosomal protein L1 [Bacillus cereus BDRD-ST24]
Length = 230
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 80/173 (46%), Gaps = 16/173 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ + ++ F ++ E A + + G VGD+D I I++G F V+ P ++ ++
Sbjct: 70 GKVQRVLVF-AKGEKAKEAEVAGADFVGDTDYIGKIQQGWFD---FDVVVATPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ D+ ++ G ++Y + K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTFDVTKAVNEIKAGKVEYRVDKA------GNIHVPIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGL 324
+L +N K I + +KP + ++ + + S P ++D+S L
Sbjct: 180 FEDAKLVENFKTIADTLQKVKPAA--AKGTYMKNVTVASTMGP-GVRVDVSTL 229
>gi|317504002|ref|ZP_07962009.1| 50S ribosomal protein L1 [Prevotella salivae DSM 15606]
gi|315664862|gb|EFV04522.1| 50S ribosomal protein L1 [Prevotella salivae DSM 15606]
Length = 230
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 23/149 (15%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNPK 208
G+ ++A C+ + A+ ++ G VG + ++ I+ G ++TMP+ C K
Sbjct: 70 GKTVRVLALCTPDQEASA-KEAGADYVGLDEYVEKIKGGWTDIDVIITMPS-----CMGK 123
Query: 209 I--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
I L ++ RGL+ P KS T+ +D+ K ++ G K D + G
Sbjct: 124 IGPLGRVLGPRGLM----PNPKSGTVTMDVAKAVKEVKQG-----KIDFKVDKAGIIHTS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ M+ EQ+ N K + + +KP +
Sbjct: 175 IGKISMTPEQIFGNAKEFIQTVIKLKPAA 203
>gi|70727470|ref|YP_254386.1| 50S ribosomal protein L1 [Staphylococcus haemolyticus JCSC1435]
gi|82581576|sp|Q4L3J7.1|RL1_STAHJ RecName: Full=50S ribosomal protein L1
gi|68448196|dbj|BAE05780.1| 50S ribosomal protein L1 [Staphylococcus haemolyticus JCSC1435]
Length = 231
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ + ++ F + + + ++ G VG+S+ ++ I++G F V+ P ++ ++
Sbjct: 70 GKSQRVLVFA-KGDKITEAEEAGADYVGESEYVQKIQQGWFD---FDVVVATPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKA------GIVHASIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
S E+L +N K + ++ KP S
Sbjct: 180 FSDEKLVENFKTLQDVLAKAKPSS 203
>gi|325853541|ref|ZP_08171373.1| ribosomal protein L1 [Prevotella denticola CRIS 18C-A]
gi|327313172|ref|YP_004328609.1| 50S ribosomal protein L1 [Prevotella denticola F0289]
gi|325484345|gb|EGC87273.1| ribosomal protein L1 [Prevotella denticola CRIS 18C-A]
gi|326946281|gb|AEA22166.1| ribosomal protein L1 [Prevotella denticola F0289]
Length = 230
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 23/149 (15%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNPK 208
G+ ++ C+ + AA ++ G VG + ++ I+ G ++TMP+ C K
Sbjct: 70 GKVTRVLCLCTPDQEAAA-KEAGADYVGLDEYVEKIKGGWTDVDVIITMPS-----CMGK 123
Query: 209 I--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
+ L ++ RGL+ P KS T+ +D+ K ++ G K D + G
Sbjct: 124 LGPLGRVLGPRGLM----PNPKSGTVTMDVAKAVKEVKQG-----KIDFKVDKTGIIHTS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ M+ EQ+ N K ++ + +KP +
Sbjct: 175 IGKVSMTPEQIYGNAKEFISTVIKLKPAA 203
>gi|49482768|ref|YP_039992.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282903126|ref|ZP_06311017.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus C160]
gi|282904916|ref|ZP_06312774.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282907866|ref|ZP_06315701.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|283957336|ref|ZP_06374789.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|295427076|ref|ZP_06819712.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297590571|ref|ZP_06949210.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus MN8]
gi|415684094|ref|ZP_11449249.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
CGS00]
gi|418566052|ref|ZP_13130441.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21264]
gi|418581213|ref|ZP_13145296.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1605]
gi|418595402|ref|ZP_13159016.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21342]
gi|418601633|ref|ZP_13165053.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21345]
gi|418891142|ref|ZP_13445259.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1176]
gi|418896923|ref|ZP_13450996.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIGC341D]
gi|418899888|ref|ZP_13453947.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1214]
gi|418908293|ref|ZP_13462301.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG149]
gi|418916348|ref|ZP_13470311.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1267]
gi|418922170|ref|ZP_13476087.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1233]
gi|418981405|ref|ZP_13529120.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1242]
gi|61215548|sp|Q6GJD0.1|RL1_STAAR RecName: Full=50S ribosomal protein L1
gi|49240897|emb|CAG39564.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
MRSA252]
gi|282328250|gb|EFB58528.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331741|gb|EFB61252.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282596081|gb|EFC01042.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus C160]
gi|283790787|gb|EFC29602.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus
A017934/97]
gi|295128864|gb|EFG58494.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297576870|gb|EFH95585.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus MN8]
gi|315193902|gb|EFU24296.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus
CGS00]
gi|371971926|gb|EHO89318.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21264]
gi|374398052|gb|EHQ69250.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21345]
gi|374401541|gb|EHQ72607.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21342]
gi|377704970|gb|EHT29278.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1214]
gi|377707225|gb|EHT31518.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1242]
gi|377711997|gb|EHT36220.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1605]
gi|377732099|gb|EHT56150.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1176]
gi|377735493|gb|EHT59523.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1233]
gi|377751700|gb|EHT75628.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1267]
gi|377755632|gb|EHT79530.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG149]
gi|377761702|gb|EHT85571.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIGC341D]
Length = 229
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ +S++ F + + A+ + G VG+++ ++ I++G F V+ P ++ ++
Sbjct: 70 GKSQSVLVFA-KGDKIAEAEAAGADYVGEAEYVQKIQQGWFD---FDVVVATPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKA------GIVHASIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
+ EQL +N + ++ KP S
Sbjct: 180 FTDEQLIENFNTLQDVLAKAKPSS 203
>gi|398343413|ref|ZP_10528116.1| 50S ribosomal protein L1 [Leptospira inadai serovar Lyme str. 10]
Length = 230
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 80/185 (43%), Gaps = 28/185 (15%)
Query: 123 ATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDR--SIIAFCS---QHETAAQLQDMG 177
T+EI+T + K ++ + S HG + ++ FC Q+E A G
Sbjct: 39 GTIEIATKVNYKSLQN-------IRGTISLPHGTGKLVRVLVFCKGDKQNEAKAA----G 87
Query: 178 VALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVD 235
VGD+D I+ + G F + P ++ D+ ++ +L ++ +P K+ T+ D
Sbjct: 88 AEFVGDADLIEKVAGGWTD---FDACVATPDMMKDVGKLGPILGRKGLMPKPKAGTVTND 144
Query: 236 LIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPP 294
+ L++G I+Y K G +G++ Q +L +N++ ++ + KP
Sbjct: 145 VAKAVGELKSGRIEYRPDKG------GVVHLGVGKVSFDQTKLVENIRTVVQTLLRDKPS 198
Query: 295 SKPED 299
D
Sbjct: 199 DAKGD 203
>gi|365164650|ref|ZP_09360333.1| ribosomal protein L1 [Synergistes sp. 3_1_syn1]
gi|363620162|gb|EHL71461.1| ribosomal protein L1 [Synergistes sp. 3_1_syn1]
Length = 236
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 15/145 (10%)
Query: 154 HGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADL 213
H + +++A + + A QD G +VG D + I+ G + F VI P I+
Sbjct: 71 HTKKVAVLALGDKQKEA---QDAGADIVGGEDLVAEIQNGRL---DFDAVIATPDIMKSA 124
Query: 214 MRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRL 270
R+ +L R +P+ K+ T+ D+ K ++ G +++ + K + +GR
Sbjct: 125 GRLGKVLGPRGLMPSAKTNTVTFDVADAIKEIKAGRVEFRVDKTAITHN------AVGRA 178
Query: 271 DMSQEQLEDNLKRILADISTMKPPS 295
E L N+K +L I +P +
Sbjct: 179 SFPLENLMGNVKTLLRAIIKARPAA 203
>gi|418985039|ref|ZP_13532729.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1500]
gi|377708171|gb|EHT32462.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus CIG1500]
Length = 229
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 73/144 (50%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ +S++ F ++ + A+ + G VG+++ ++ I++G F V+ P ++ ++
Sbjct: 70 GKSQSVLVF-AKGDKIAEAEAAGADYVGEAEYVQKIQQGWFD---FDVVVATPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKA------GIVHASIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
+ EQL +N + ++ KP S
Sbjct: 180 FTDEQLIENFNTLQDVLAKAKPSS 203
>gi|254823015|ref|ZP_05228016.1| 50S ribosomal protein L1 [Mycobacterium intracellulare ATCC 13950]
gi|379749110|ref|YP_005339931.1| 50S ribosomal protein L1 [Mycobacterium intracellulare ATCC 13950]
gi|379756427|ref|YP_005345099.1| 50S ribosomal protein L1 [Mycobacterium intracellulare MOTT-02]
gi|379763966|ref|YP_005350363.1| 50S ribosomal protein L1 [Mycobacterium intracellulare MOTT-64]
gi|387877820|ref|YP_006308124.1| 50S ribosomal protein L1 [Mycobacterium sp. MOTT36Y]
gi|443307604|ref|ZP_21037391.1| 50S ribosomal protein L1 [Mycobacterium sp. H4Y]
gi|378801474|gb|AFC45610.1| 50S ribosomal protein L1 [Mycobacterium intracellulare ATCC 13950]
gi|378806643|gb|AFC50778.1| 50S ribosomal protein L1 [Mycobacterium intracellulare MOTT-02]
gi|378811908|gb|AFC56042.1| 50S ribosomal protein L1 [Mycobacterium intracellulare MOTT-64]
gi|386791278|gb|AFJ37397.1| 50S ribosomal protein L1 [Mycobacterium sp. MOTT36Y]
gi|442764972|gb|ELR82970.1| 50S ribosomal protein L1 [Mycobacterium sp. H4Y]
Length = 235
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 67/153 (43%), Gaps = 11/153 (7%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V + HG ++ +A + + A Q Q G +VG D I+ I+ G + F
Sbjct: 57 QMVRGTVNLPHGTGKTARVAVFAVGDKAEQAQAAGADIVGSDDLIEKIQGGWLE---FDA 113
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
I P +A + RI +L R +P K+ T+ D+ ++ G K + + D Q
Sbjct: 114 AIATPDQMAKVGRIARVLGPRGLMPNPKTGTVTPDVAKAVADIKGG-KINFRIDKQAN-- 170
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
F IG+ ++ L +N L ++ +KP
Sbjct: 171 --LHFVIGKASFDEKSLAENYGAALDEVLRLKP 201
>gi|308047970|ref|YP_003911536.1| 50S ribosomal protein L1P [Ferrimonas balearica DSM 9799]
gi|307630160|gb|ADN74462.1| LSU ribosomal protein L1P [Ferrimonas balearica DSM 9799]
Length = 233
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 67/150 (44%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A ++ G LVG + ++ G + F VI +P D
Sbjct: 67 HGTGRDVRVAVFTQGANADAAKEAGADLVGMDELAAQVKAGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K+ T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKTGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++D +L++NL+ +L + KP S
Sbjct: 174 TIGKVDFDAAKLKENLESLLVALKKAKPAS 203
>gi|307720236|ref|YP_003891376.1| 50S ribosomal protein L1P [Sulfurimonas autotrophica DSM 16294]
gi|306978329|gb|ADN08364.1| LSU ribosomal protein L1P [Sulfurimonas autotrophica DSM 16294]
Length = 230
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 82/195 (42%), Gaps = 21/195 (10%)
Query: 107 ETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDP--WTHIVEVEHSFDHGEDRSI-IAF 163
E T+ +L A TVEI+ + +DP +V HG +++ +A
Sbjct: 21 EEASATVKDLKSAKFDETVEIAMNLN------VDPRHADQMVRGAIVLPHGTGKTVRVAV 74
Query: 164 CSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL--K 221
++ A + + G +VG D + I+ G+ F V+ P + + +I +L K
Sbjct: 75 FAKGAKADEAKAAGADIVGTDDLVAQIKEGIFN---FDVVVAAPDCMGLVGQIGRILGPK 131
Query: 222 KRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDN 280
+P K+ T+ D+ ++ G + + + K G IG+ +Q+E+N
Sbjct: 132 GLMPNPKTGTVTPDVATAVNNVKGGQVNFRVDKK------GNIHAGIGKASFDAKQIEEN 185
Query: 281 LKRILADISTMKPPS 295
L L I+ KP S
Sbjct: 186 LTTFLVAINKQKPAS 200
>gi|406032710|ref|YP_006731602.1| 50S ribosomal protein L1 [Mycobacterium indicus pranii MTCC 9506]
gi|405131256|gb|AFS16511.1| 50S ribosomal protein L1 [Mycobacterium indicus pranii MTCC 9506]
Length = 239
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG ++ +A + + A Q Q G +VG D I+ I+ G + F I P +A
Sbjct: 71 HGTGKTARVAVFAVGDKAEQAQAAGADIVGSDDLIEKIQGGWLE---FDAAIATPDQMAK 127
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ RI +L R +P K+ T+ D+ ++ G K + + D Q F IG+
Sbjct: 128 VGRIARVLGPRGLMPNPKTGTVTPDVAKAVADIKGG-KINFRIDKQAN----LHFVIGKA 182
Query: 271 DMSQEQLEDNLKRILADISTMKP 293
++ L +N L ++ +KP
Sbjct: 183 SFDEKSLAENYGAALDEVLRLKP 205
>gi|403510129|ref|YP_006641767.1| ribosomal protein L1 [Nocardiopsis alba ATCC BAA-2165]
gi|402800994|gb|AFR08404.1| ribosomal protein L1 [Nocardiopsis alba ATCC BAA-2165]
Length = 225
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ ++ F + E A Q + G +VGD D + ++ G + F V+ P ++ +
Sbjct: 69 GKTARVLVFAT-GERAEQARAAGADIVGDDDLVTQVQNGFL---DFDAVVATPDLMGKVG 124
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L R +P K+ T+ D+ ++ G I++ + + G F +G++
Sbjct: 125 RLGRVLGPRGLMPNPKTGTVTPDVAKAVTDIKGGKIEFRVDR------HGNLHFIVGKVS 178
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
+ +L +N + + +++ +KP +
Sbjct: 179 FDESKLLENYQAAIDEVNRLKPSA 202
>gi|314932762|ref|ZP_07840131.1| ribosomal protein L1 [Staphylococcus caprae C87]
gi|417907418|ref|ZP_12551191.1| ribosomal protein L1 [Staphylococcus capitis VCU116]
gi|313654443|gb|EFS18196.1| ribosomal protein L1 [Staphylococcus caprae C87]
gi|341596311|gb|EGS38927.1| ribosomal protein L1 [Staphylococcus capitis VCU116]
Length = 231
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ + ++ F + + + ++ G VG+SD ++ I++G F V+ P ++ ++
Sbjct: 70 GKSQRVLVFA-KGDKITEAEEAGADYVGESDYVQKIQQGWFD---FDVVVATPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEK------AGIVHASIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
E+L +N K + ++ KP S
Sbjct: 180 FDDEKLVENFKALQDVLAKAKPSS 203
>gi|309387043|gb|ADO67764.1| Tpa2 [Nocardiopsis sp. TFS65-07]
Length = 225
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ ++ F + E A Q + G +VGD D + ++ G + F V+ P ++ +
Sbjct: 69 GKTARVLVFAT-GERAEQARAAGADIVGDDDLVTQVQNGFL---DFDAVVATPDLMGKVG 124
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
R+ +L R +P K+ T+ D+ ++ G I++ + + G F +G++
Sbjct: 125 RLGRVLGPRGLMPNPKTGTVTPDVAKAVTDIKGGKIEFRVDR------HGNLHFIVGKVS 178
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
+ +L +N + + +++ +KP +
Sbjct: 179 FDESKLLENYQAAIDEVNRLKPSA 202
>gi|295698611|ref|YP_003603266.1| ribosomal protein L1 [Candidatus Riesia pediculicola USDA]
gi|291157236|gb|ADD79681.1| ribosomal protein L1 [Candidatus Riesia pediculicola USDA]
Length = 234
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 19/152 (12%)
Query: 151 SFDHG-EDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNP-- 207
+F +G E + IA + +A + + +G+ L+G D + + R F VI +
Sbjct: 67 AFPNGFEKKRKIAVFTSGRSAEKAKILGIKLIGMEDLAEKLVR---KKNKFDLVIASVES 123
Query: 208 -KILADLMRI---RGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYS 263
KI+ + I RGL+ P+LK+ T+ D+ K +Q G + Q G
Sbjct: 124 MKIVKKVSHIIGPRGLM----PSLKTGTITEDIESCIKEVQNGKAFY-----QNDKNGIV 174
Query: 264 DFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G++D+ ++++E+N++ L + KP S
Sbjct: 175 HSSVGKIDLDEKKIEENIRFFLKHLIRSKPIS 206
>gi|386285644|ref|ZP_10062858.1| 50S ribosomal protein L1 [Sulfurovum sp. AR]
gi|385343352|gb|EIF50074.1| 50S ribosomal protein L1 [Sulfurovum sp. AR]
Length = 234
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 58/240 (24%), Positives = 109/240 (45%), Gaps = 34/240 (14%)
Query: 94 RIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDP--WTHIVEVEHS 151
+ + EA+A T+ NL A TVE++ + +DP +V
Sbjct: 20 KTYSVDEAMA--------TLKNLKSAKFDETVEVALNLN------VDPRHADQMVRGSVV 65
Query: 152 FDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKIL 210
+G +++ +A ++ A + + G LVG +D I+ I+ G + F VI P ++
Sbjct: 66 LPNGTGKTVRVAVFAKDAKADEAKAAGADLVGSTDLIESIQAGNID---FDIVISTPDMM 122
Query: 211 ADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQT--GIKYSMKKDPQEQDFGYSDFH 266
L ++ +L K +P K+ T+ +D +AK ++ G + + + D + G
Sbjct: 123 GVLGKVARILGPKGLMPNPKTGTVTMD---VAKAVENAKGGQVNFRVDKK----GNIHAG 175
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLIE 326
IG++ S+E++++N +L I+ KP S +IT + SP LD + L+E
Sbjct: 176 IGKVSFSEEKIKENFVTLLETINKAKPAS--AKGRYITNGAISLTMSPS-ITLDTAELME 232
>gi|323144263|ref|ZP_08078888.1| ribosomal protein L1 [Succinatimonas hippei YIT 12066]
gi|322415956|gb|EFY06665.1| ribosomal protein L1 [Succinatimonas hippei YIT 12066]
Length = 237
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R++ + +Q A + G LVG + I++G M F VI +P D
Sbjct: 67 HGNGRTVRVCVFTQGAAAEAAKAAGADLVGMDELAAEIKKG---MMDFDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ D+ K ++G ++Y K G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKVGTVTRDVAQAVKNAKSGQVRYRNDKT------GVIQA 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+++ + QL DNL +L I+ KP S
Sbjct: 174 SIGKVNFTVAQLTDNLNALLGAITKAKPAS 203
>gi|422464145|ref|ZP_16540756.1| ribosomal protein L1, partial [Propionibacterium acnes HL060PA1]
gi|315093852|gb|EFT65828.1| ribosomal protein L1 [Propionibacterium acnes HL060PA1]
Length = 227
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 154 HGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG ++ ++ F + E A ++ G VGD D I ++ G + F V+ P ++
Sbjct: 66 HGTGKTARVLVFAT-GEKAEAAREAGADEVGDDDLIAKVQGGYLD---FDSVVATPDMMG 121
Query: 212 DLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH--I 267
+ R+ +L R +P K+ T+ +D+ ++ G K + D Y++ H I
Sbjct: 122 KVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVSDIKGG-KIEFRTDR------YANLHFLI 174
Query: 268 GRLDMSQEQLEDNLKRILADISTMKP 293
G++ E+L +N L +I +KP
Sbjct: 175 GKVSFGSEKLAENYFAALDEILRLKP 200
>gi|303237491|ref|ZP_07324056.1| ribosomal protein L1 [Prevotella disiens FB035-09AN]
gi|302482311|gb|EFL45341.1| ribosomal protein L1 [Prevotella disiens FB035-09AN]
Length = 230
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 23/149 (15%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNPK 208
G+ ++ C+ + AA ++ G VG + I+ I G ++TMP+ C K
Sbjct: 70 GKVTRVLCLCTPDQEAAA-KEAGADYVGLDEYIQKINGGWTDIDVIITMPS-----CMGK 123
Query: 209 I--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
+ L ++ RGL+ P KS T+ +D+ + +++G K D + G
Sbjct: 124 VGPLGRVLGPRGLM----PNPKSGTVTMDVAKAVRDVKSG-----KIDFKVDKAGIIHTS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ M+ EQ+ N K ++ + +KP +
Sbjct: 175 IGKVSMTAEQIFGNAKEFISTVIKLKPAA 203
>gi|329944005|ref|ZP_08292273.1| ribosomal protein L1 [Actinomyces sp. oral taxon 170 str. F0386]
gi|328531206|gb|EGF58052.1| ribosomal protein L1 [Actinomyces sp. oral taxon 170 str. F0386]
Length = 229
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 17/151 (11%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S HG ++ + +Q E A Q G VG + I+ + +G F + P +
Sbjct: 64 SLPHGTGKTARVVVFAQGERAEQALAAGADEVGGDELIEKVAKGYTD---FDAAVATPDL 120
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
+ + R+ +L R +P ++ T+ +D+ ++ G I++ + + S+ H
Sbjct: 121 MGKVGRLGRVLGPRGLMPNPRTGTVTMDVAKAVSDIKGGRIEFRVDR--------ASNLH 172
Query: 267 --IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ S+EQL +N + L ++ +KP +
Sbjct: 173 FIIGKASFSEEQLTENFQAALEEVLRLKPST 203
>gi|251793501|ref|YP_003008230.1| 50S ribosomal protein L1 [Aggregatibacter aphrophilus NJ8700]
gi|422337353|ref|ZP_16418324.1| 50S ribosomal protein L1 [Aggregatibacter aphrophilus F0387]
gi|247534897|gb|ACS98143.1| ribosomal protein L1 [Aggregatibacter aphrophilus NJ8700]
gi|353345380|gb|EHB89675.1| 50S ribosomal protein L1 [Aggregatibacter aphrophilus F0387]
Length = 229
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 71/150 (47%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A + G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGREVRVAVFTQGANAEAAKAAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ + S+ QL++NL+ +LA ++ KP +
Sbjct: 174 TIGKANFSEVQLKENLQALLAALTKAKPTT 203
>gi|407697622|ref|YP_006822410.1| 50S ribosomal protein L1 [Alcanivorax dieselolei B5]
gi|407254960|gb|AFT72067.1| 50S ribosomal protein L1 [Alcanivorax dieselolei B5]
Length = 231
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG +++ +A +Q A + ++ G +VG D + ++ G + F VI +P D
Sbjct: 67 HGTGKTVRVAVFAQGAKAEEAKEAGADVVGFDDLAEQVQGGEIN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ D+ K + G ++Y K G
Sbjct: 120 AMRVVGKLGTILGPRGLMPNPKVGTVTPDVAQAVKNAKGGQVRYRTDKG------GIIHC 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G++ +++N++ ++AD+ KP S
Sbjct: 174 TVGQIGFDANAIKENVEALIADLKKAKPAS 203
>gi|406885543|gb|EKD32711.1| 50S ribosomal protein L1 [uncultured bacterium]
Length = 227
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 77/176 (43%), Gaps = 22/176 (12%)
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF-- 202
I+ + HSF G+ + + AF E + G ++ D + I L T +F
Sbjct: 61 IISLPHSF--GKSKIVAAFV-DSEKVNDAKAAGADIIADDEFI----AKLATSGKIEFDV 113
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
+ P ++ + ++ LL R +P K++T+ ++ + K Q G K S K D
Sbjct: 114 AVATPSMMPKIAKLAKLLGPRGLMPNPKTETVSDNVTKMIKE-QKGGKISFKND------ 166
Query: 261 GYSDFH--IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+ H IG+ +S ++E+N + + KPPS F+ +++L + P
Sbjct: 167 STGNIHQIIGKASLSAAEIEENFNAFVNILKKSKPPS--SKGIFLRKVVLTTTMGP 220
>gi|408673888|ref|YP_006873636.1| ribosomal protein L1 [Emticicia oligotrophica DSM 17448]
gi|387855512|gb|AFK03609.1| ribosomal protein L1 [Emticicia oligotrophica DSM 17448]
Length = 232
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 15/168 (8%)
Query: 151 SFDHGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
+ HG +++ + C+ + A + G VG + I+ IE+G + +I P
Sbjct: 64 ALPHGTGKTVRVLVLCTP-DKEADAKAAGADHVGLDEYIQKIEQGWTDI---DVIITMPT 119
Query: 209 ILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
++A L ++ +L R +P KS T+ +D+ K ++ G K D + G
Sbjct: 120 VMAKLGKLGKILGPRGLMPNPKSGTVTLDVATAVKEVKAG-----KIDFKVDKSGIIHAS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
IG++ S E+L +N ++ + +KP S ++ I L S P
Sbjct: 175 IGKVSFSPEKLAENANELIQTLLKLKPSS--AKGTYVKGISLASTMGP 220
>gi|400291889|ref|ZP_10793873.1| ribosomal protein L1 [Actinomyces naeslundii str. Howell 279]
gi|399903004|gb|EJN85775.1| ribosomal protein L1 [Actinomyces naeslundii str. Howell 279]
Length = 229
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 17/151 (11%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S HG ++ + +Q E A Q G VG + I+ + +G F + P +
Sbjct: 64 SLPHGTGKTARVVVFAQGERAEQALAAGADEVGGDELIEKVAKGYTD---FDAAVATPDL 120
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
+ + R+ +L R +P ++ T+ +D+ ++ G I++ + + S+ H
Sbjct: 121 MGKVGRLGRVLGPRGLMPNPRTGTVTMDVAKAVSDIKGGRIEFRVDR--------ASNLH 172
Query: 267 --IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ S+EQL +N + L ++ +KP +
Sbjct: 173 FIIGKASFSEEQLTENFQAALEEVLRLKPST 203
>gi|282855231|ref|ZP_06264563.1| ribosomal protein L1 [Propionibacterium acnes J139]
gi|386070079|ref|YP_005984975.1| 50S ribosomal protein L1 [Propionibacterium acnes ATCC 11828]
gi|422391198|ref|ZP_16471291.1| ribosomal protein L1 [Propionibacterium acnes HL103PA1]
gi|422467370|ref|ZP_16543923.1| ribosomal protein L1 [Propionibacterium acnes HL110PA4]
gi|422468104|ref|ZP_16544639.1| ribosomal protein L1 [Propionibacterium acnes HL110PA3]
gi|422566427|ref|ZP_16642061.1| ribosomal protein L1 [Propionibacterium acnes HL082PA2]
gi|422575146|ref|ZP_16650690.1| ribosomal protein L1 [Propionibacterium acnes HL001PA1]
gi|282581819|gb|EFB87204.1| ribosomal protein L1 [Propionibacterium acnes J139]
gi|314924043|gb|EFS87874.1| ribosomal protein L1 [Propionibacterium acnes HL001PA1]
gi|314965015|gb|EFT09114.1| ribosomal protein L1 [Propionibacterium acnes HL082PA2]
gi|314983090|gb|EFT27182.1| ribosomal protein L1 [Propionibacterium acnes HL110PA3]
gi|315090634|gb|EFT62610.1| ribosomal protein L1 [Propionibacterium acnes HL110PA4]
gi|327326457|gb|EGE68246.1| ribosomal protein L1 [Propionibacterium acnes HL103PA1]
gi|353454446|gb|AER04965.1| ribosomal protein L1 [Propionibacterium acnes ATCC 11828]
Length = 232
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 154 HGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG ++ ++ F + E A ++ G VGD D I ++ G + F V+ P ++
Sbjct: 66 HGTGKTARVLVFAT-GEKAEAAREAGADEVGDDDLIAKVQGGYLD---FDSVVATPDMMG 121
Query: 212 DLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH--I 267
+ R+ +L R +P K+ T+ +D+ ++ G K + D Y++ H I
Sbjct: 122 KVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVSDIKGG-KIEFRTDR------YANLHFLI 174
Query: 268 GRLDMSQEQLEDNLKRILADISTMKP 293
G++ E+L +N L +I +KP
Sbjct: 175 GKVSFGSEKLAENYFAALDEILRLKP 200
>gi|410633294|ref|ZP_11343941.1| large subunit ribosomal protein L1 [Glaciecola arctica BSs20135]
gi|410147463|dbj|GAC20808.1| large subunit ribosomal protein L1 [Glaciecola arctica BSs20135]
Length = 231
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 22/157 (14%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A +Q A ++ G +VG D + +++G + F V+ +P D MR+ G L
Sbjct: 75 VAVFTQGANAEAAKEAGADIVGMEDLAELVKKGEMN---FDVVVASP----DAMRVVGQL 127
Query: 221 ------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+ +P K+ T+ D+ K + G ++Y K+ G IG++
Sbjct: 128 GQILGPRGLMPNPKTGTVTPDVATAVKNAKAGQVRYRNDKN------GIIHASIGKIAFE 181
Query: 274 QEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWS 310
+Q+++NL +L ++ KP S FI +I L +
Sbjct: 182 SKQIQENLAALLEALNKAKPSS--AKGTFIKKISLST 216
>gi|406912018|gb|EKD51702.1| 50S ribosomal protein L1 [uncultured bacterium]
Length = 233
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 66/145 (45%), Gaps = 11/145 (7%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG + + + + E + ++ G VG++D I+ I+ G + F V+ P ++
Sbjct: 66 HGLGKKVRVLALVKGEKETEAKEAGADFVGNTDMIEKIQGGWLD---FDSVVATPDMMGV 122
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ ++ +L R +P K T+ D+ + + G K + + + G G++
Sbjct: 123 VSKVGKILGPRGLMPNPKLGTVSFDVKKAIQDCKAG-----KVEFRNEKAGNVHAPFGKI 177
Query: 271 DMSQEQLEDNLKRILADISTMKPPS 295
E+L DNLK +L I MKP +
Sbjct: 178 SFGAEKLTDNLKVLLETIRKMKPAT 202
>gi|345865828|ref|ZP_08817996.1| 50S ribosomal protein L1 [endosymbiont of Tevnia jerichonana (vent
Tica)]
gi|345879051|ref|ZP_08830733.1| glucose-6-phosphate isomerase [endosymbiont of Riftia pachyptila
(vent Ph05)]
gi|344223935|gb|EGV50356.1| glucose-6-phosphate isomerase [endosymbiont of Riftia pachyptila
(vent Ph05)]
gi|345123065|gb|EGW52977.1| 50S ribosomal protein L1 [endosymbiont of Tevnia jerichonana (vent
Tica)]
Length = 231
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 21/160 (13%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V HG +++ +A +Q A ++ G +VG D + I+ G M F
Sbjct: 57 QVVRGSTVLPHGTGKTVRVAVFTQGANADAAKEAGADIVGMEDLAEQIKGG---MMDFDV 113
Query: 203 VICNPKILADLMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDP 255
V+ +P D MR+ G L + +P K T+ ++ + G ++Y K
Sbjct: 114 VVASP----DAMRVVGQLGQILGPRGLMPNPKVGTVTPNVAEAVNNAKAGQVRYRTDK-- 167
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
G IG++D ++L+ NL+ +L D+ KP +
Sbjct: 168 ----AGIIHCTIGKVDFDGDKLKQNLEALLGDLVKAKPSA 203
>gi|417895962|ref|ZP_12539938.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21235]
gi|341841168|gb|EGS82631.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21235]
Length = 230
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ +S++ F + + A+ + G VG+++ ++ I++G F V+ P ++ ++
Sbjct: 70 GKSQSVLVFA-KGDKIAEAKAAGADYVGEAEYVQKIQQGWFD---FDVVVATPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKA------GIVHASIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
+ EQL +N + ++ KP S
Sbjct: 180 FTDEQLIENFNTLQDVLAKAKPSS 203
>gi|332295402|ref|YP_004437325.1| 50S ribosomal protein L1 [Thermodesulfobium narugense DSM 14796]
gi|332178505|gb|AEE14194.1| ribosomal protein L1 [Thermodesulfobium narugense DSM 14796]
Length = 239
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 79/184 (42%), Gaps = 14/184 (7%)
Query: 115 NLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHGEDRSI-IAFCSQHETAAQL 173
N P+A TVE+S T VK+ D + S G + + + ++ E A +
Sbjct: 32 NSPKAKFDETVEVSVRTGLD-VKHAD---QQIRTTVSLPAGTGKKVRVLVVAKGEKANEA 87
Query: 174 QDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL--KKRIPTLKSQT 231
++ G VG D ++ I++ F +I P ++ L ++ +L K +P K+ T
Sbjct: 88 KEAGADYVGAEDILQKIQQE--NWFDFDVIIATPDMMGALGKLGRILGPKGLMPNPKTGT 145
Query: 232 LGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTM 291
+ D+ K + G K ++ D G IG++ S+E L N ++ I
Sbjct: 146 VTFDIARAVKEFKAG-KVELRTDKS----GILHVPIGKVSFSKEDLMANFAAVMDTILRS 200
Query: 292 KPPS 295
KP +
Sbjct: 201 KPSA 204
>gi|422431660|ref|ZP_16508532.1| ribosomal protein L1 [Propionibacterium acnes HL059PA2]
gi|422509792|ref|ZP_16585946.1| ribosomal protein L1 [Propionibacterium acnes HL059PA1]
gi|313816873|gb|EFS54587.1| ribosomal protein L1 [Propionibacterium acnes HL059PA1]
gi|315100105|gb|EFT72081.1| ribosomal protein L1 [Propionibacterium acnes HL059PA2]
Length = 232
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 71/156 (45%), Gaps = 17/156 (10%)
Query: 144 HIVEVEHSFDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
+V + HG ++ ++ F + E A ++ G VGD D I ++ G + F
Sbjct: 56 QMVRGAVNLPHGTGKTARVLVFAT-GEKAEAAREAGADEVGDDDLIAKVQGGYLD---FD 111
Query: 202 FVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQD 259
V+ P ++ + R+ +L R +P K+ T+ +D+ ++ G K + D
Sbjct: 112 SVVATPDMMGKVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVSDIKGG-KIEFRTDR---- 166
Query: 260 FGYSDFH--IGRLDMSQEQLEDNLKRILADISTMKP 293
Y++ H IG++ E+L +N L +I +KP
Sbjct: 167 --YANLHFLIGKVSFGSEKLAENYFAALDEILRLKP 200
>gi|260890610|ref|ZP_05901873.1| ribosomal protein L1 [Leptotrichia hofstadii F0254]
gi|260859655|gb|EEX74155.1| ribosomal protein L1 [Leptotrichia hofstadii F0254]
Length = 235
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 11/148 (7%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S +G +++ I + E + G GD + I I+ G + F VI P +
Sbjct: 64 SLPNGTGKTVRILVITSGENIDKALAAGADFAGDDEYINKIQNGWLD---FDLVIATPDM 120
Query: 210 LADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHI 267
+ L R+ +L K +P KS T+ ++ + + G K + K D G I
Sbjct: 121 MPKLGRLGRILGTKGLMPNPKSGTVTTNVEQTVQEFKKG-KVAFKVD----KLGSIHLPI 175
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPS 295
G++D ++E + +N K L I +KP +
Sbjct: 176 GKVDFTKEAIVENFKVALDQIIKLKPAA 203
>gi|158520716|ref|YP_001528586.1| 50S ribosomal protein L1 [Desulfococcus oleovorans Hxd3]
gi|226724902|sp|A8ZUU6.1|RL1_DESOH RecName: Full=50S ribosomal protein L1
gi|158509542|gb|ABW66509.1| ribosomal protein L1 [Desulfococcus oleovorans Hxd3]
Length = 234
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 11/145 (7%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG + I I ++ E + D G VG+ + I+ I+ G F + P ++
Sbjct: 67 HGTGKEIKILVFAKGEKEKEALDAGADFVGNDELIEDIKNGWFG---FDKAVATPDMMGA 123
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ +I LL R +P K+ T+ D+ L+ G K D + G +G+
Sbjct: 124 VGKIGKLLGPRGLMPNAKTGTVTFDVARAVNDLKAG-----KIDFRVDKAGIVHAPLGKA 178
Query: 271 DMSQEQLEDNLKRILADISTMKPPS 295
E+L+DN+ +L + MKP +
Sbjct: 179 SFGTEKLQDNMLALLRMLVAMKPAT 203
>gi|50843341|ref|YP_056568.1| 50S ribosomal protein L1 [Propionibacterium acnes KPA171202]
gi|387504250|ref|YP_005945479.1| 50S ribosomal protein L1 [Propionibacterium acnes 6609]
gi|422456927|ref|ZP_16533590.1| ribosomal protein L1 [Propionibacterium acnes HL030PA1]
gi|61215505|sp|Q6A6K3.1|RL1_PROAC RecName: Full=50S ribosomal protein L1
gi|50840943|gb|AAT83610.1| 50S ribosomal protein L1 [Propionibacterium acnes KPA171202]
gi|315106011|gb|EFT77987.1| ribosomal protein L1 [Propionibacterium acnes HL030PA1]
gi|335278295|gb|AEH30200.1| 50S ribosomal protein L1 [Propionibacterium acnes 6609]
Length = 232
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 154 HGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG ++ ++ F + E A ++ G VGD D I ++ G + F V+ P ++
Sbjct: 66 HGTGKTTRVLVFAT-GEKAEAAREAGADEVGDDDLIAKVQGGYLD---FDSVVATPDMMG 121
Query: 212 DLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH--I 267
+ R+ +L R +P K+ T+ +D+ ++ G K + D Y++ H I
Sbjct: 122 KVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVSDIKGG-KIEFRTDR------YANLHFLI 174
Query: 268 GRLDMSQEQLEDNLKRILADISTMKP 293
G++ E+L +N L +I +KP
Sbjct: 175 GKVSFGSEKLAENYFAALDEILRLKP 200
>gi|408375755|ref|ZP_11173409.1| 50S ribosomal protein L1 [Alcanivorax hongdengensis A-11-3]
gi|407764373|gb|EKF72856.1| 50S ribosomal protein L1 [Alcanivorax hongdengensis A-11-3]
Length = 231
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG +++ +A +Q A + ++ G +VG D + ++ G + F VI +P D
Sbjct: 67 HGTGKTVRVAVFAQGAKAEEAKEAGADVVGFDDLAEQVQGGEIN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ D+ K + G ++Y K G
Sbjct: 120 AMRVVGKLGTILGPRGLMPNPKVGTVTPDVAQAVKNAKGGQVRYRTDKG------GIIHC 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G++ +++N++ +LAD+ KP S
Sbjct: 174 TVGQVGFDTNAIKENVEALLADLKKAKPSS 203
>gi|374387086|ref|ZP_09644577.1| 50S ribosomal protein L1 [Odoribacter laneus YIT 12061]
gi|373222757|gb|EHP45118.1| 50S ribosomal protein L1 [Odoribacter laneus YIT 12061]
Length = 231
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 62/133 (46%), Gaps = 15/133 (11%)
Query: 194 LVTMPTFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKK 253
++TMP+ I L ++ RGL+ P KS T+ +D+ ++ G K
Sbjct: 114 IITMPSIMGKIGA---LGRILGPRGLM----PNPKSGTVTMDIAKAVTEVKQG-----KI 161
Query: 254 DPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPS 313
D + FG IG+++ ++++DN + + I +KP S ++ + L S S
Sbjct: 162 DFKVDKFGIVHTSIGKVNFDADKIKDNAREFMNVIQKLKPSS--AKGTYVKSVFLSSTMS 219
Query: 314 PEKFKLDLSGLIE 326
P KLDL L++
Sbjct: 220 PG-IKLDLKSLLD 231
>gi|405978952|ref|ZP_11037298.1| 50S ribosomal protein L1 [Actinomyces turicensis ACS-279-V-Col4]
gi|404393445|gb|EJZ88499.1| 50S ribosomal protein L1 [Actinomyces turicensis ACS-279-V-Col4]
Length = 238
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 66/149 (44%), Gaps = 13/149 (8%)
Query: 151 SFDHGEDR-SIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
S HG + S + + E A D G VG + I+ + +G F + P +
Sbjct: 64 SLPHGTGKTSRVLVFAVGERAQDAIDAGADEVGGDELIEKVAKGYTD---FDVAVATPDL 120
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
+ + R+ +L R +P K+ T+ +D+ K ++ G I++ + K F
Sbjct: 121 MGKVGRLGRVLGPRGLMPNPKTGTVTMDVAKAIKEIKGGRIEFRVDKHSNLA------FI 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G+ + EQL +N +L +I +KP S
Sbjct: 175 VGKSSFTAEQLAENYGAVLDEILRLKPAS 203
>gi|223042944|ref|ZP_03612992.1| ribosomal protein L1 [Staphylococcus capitis SK14]
gi|222443798|gb|EEE49895.1| ribosomal protein L1 [Staphylococcus capitis SK14]
Length = 231
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ + ++ F + + + ++ G VG+SD ++ I++G F V+ P ++ ++
Sbjct: 70 GKSQRVLVFA-KGDKITEAEEAGADYVGESDYVQKIQQGWFD---FDVVVATPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEK------AGIVHASIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
E+L +N K + ++ KP S
Sbjct: 180 FDDEKLVENFKALQDVLAKAKPSS 203
>gi|289424829|ref|ZP_06426611.1| ribosomal protein L1 [Propionibacterium acnes SK187]
gi|289427591|ref|ZP_06429303.1| ribosomal protein L1 [Propionibacterium acnes J165]
gi|295131412|ref|YP_003582075.1| 50S ribosomal protein L1 [Propionibacterium acnes SK137]
gi|342211744|ref|ZP_08704469.1| ribosomal protein L1 [Propionibacterium sp. CC003-HC2]
gi|354607601|ref|ZP_09025570.1| 50S ribosomal protein L1 [Propionibacterium sp. 5_U_42AFAA]
gi|365963528|ref|YP_004945094.1| 50S ribosomal protein L1 [Propionibacterium acnes TypeIA2 P.acn31]
gi|365965772|ref|YP_004947337.1| 50S ribosomal protein L1 [Propionibacterium acnes TypeIA2 P.acn17]
gi|365974707|ref|YP_004956266.1| 50S ribosomal protein L1 [Propionibacterium acnes TypeIA2 P.acn33]
gi|386024822|ref|YP_005943127.1| 50S ribosomal protein L1 [Propionibacterium acnes 266]
gi|407936268|ref|YP_006851910.1| 50S ribosomal protein L1 [Propionibacterium acnes C1]
gi|417930035|ref|ZP_12573415.1| ribosomal protein L1 [Propionibacterium acnes SK182]
gi|419419775|ref|ZP_13960008.1| 50S ribosomal protein L1 [Propionibacterium acnes PRP-38]
gi|422385755|ref|ZP_16465882.1| ribosomal protein L1 [Propionibacterium acnes HL096PA3]
gi|422388774|ref|ZP_16468874.1| ribosomal protein L1 [Propionibacterium acnes HL096PA2]
gi|422391580|ref|ZP_16471663.1| ribosomal protein L1 [Propionibacterium acnes HL099PA1]
gi|422395690|ref|ZP_16475723.1| ribosomal protein L1 [Propionibacterium acnes HL097PA1]
gi|422425358|ref|ZP_16502294.1| ribosomal protein L1 [Propionibacterium acnes HL043PA1]
gi|422428770|ref|ZP_16505680.1| ribosomal protein L1 [Propionibacterium acnes HL087PA1]
gi|422429562|ref|ZP_16506465.1| ribosomal protein L1 [Propionibacterium acnes HL072PA2]
gi|422434403|ref|ZP_16511262.1| ribosomal protein L1 [Propionibacterium acnes HL083PA2]
gi|422439007|ref|ZP_16515844.1| ribosomal protein L1 [Propionibacterium acnes HL092PA1]
gi|422443878|ref|ZP_16520675.1| ribosomal protein L1 [Propionibacterium acnes HL002PA1]
gi|422444705|ref|ZP_16521486.1| ribosomal protein L1 [Propionibacterium acnes HL027PA1]
gi|422448558|ref|ZP_16525284.1| ribosomal protein L1 [Propionibacterium acnes HL036PA3]
gi|422450981|ref|ZP_16527687.1| ribosomal protein L1 [Propionibacterium acnes HL030PA2]
gi|422453668|ref|ZP_16530358.1| ribosomal protein L1 [Propionibacterium acnes HL087PA3]
gi|422461126|ref|ZP_16537759.1| ribosomal protein L1 [Propionibacterium acnes HL038PA1]
gi|422475039|ref|ZP_16551502.1| ribosomal protein L1 [Propionibacterium acnes HL056PA1]
gi|422477441|ref|ZP_16553869.1| ribosomal protein L1 [Propionibacterium acnes HL007PA1]
gi|422478729|ref|ZP_16555144.1| ribosomal protein L1 [Propionibacterium acnes HL063PA1]
gi|422483718|ref|ZP_16560106.1| ribosomal protein L1 [Propionibacterium acnes HL036PA1]
gi|422484807|ref|ZP_16561176.1| ribosomal protein L1 [Propionibacterium acnes HL043PA2]
gi|422486943|ref|ZP_16563285.1| ribosomal protein L1 [Propionibacterium acnes HL013PA2]
gi|422489985|ref|ZP_16566309.1| ribosomal protein L1 [Propionibacterium acnes HL020PA1]
gi|422493820|ref|ZP_16570117.1| ribosomal protein L1 [Propionibacterium acnes HL086PA1]
gi|422496579|ref|ZP_16572863.1| ribosomal protein L1 [Propionibacterium acnes HL025PA1]
gi|422496907|ref|ZP_16573185.1| ribosomal protein L1 [Propionibacterium acnes HL002PA3]
gi|422500562|ref|ZP_16576817.1| ribosomal protein L1 [Propionibacterium acnes HL063PA2]
gi|422501892|ref|ZP_16578140.1| ribosomal protein L1 [Propionibacterium acnes HL027PA2]
gi|422505234|ref|ZP_16581466.1| ribosomal protein L1 [Propionibacterium acnes HL036PA2]
gi|422507435|ref|ZP_16583633.1| ribosomal protein L1 [Propionibacterium acnes HL046PA2]
gi|422513030|ref|ZP_16589155.1| ribosomal protein L1 [Propionibacterium acnes HL087PA2]
gi|422515740|ref|ZP_16591850.1| ribosomal protein L1 [Propionibacterium acnes HL110PA2]
gi|422520957|ref|ZP_16596997.1| ribosomal protein L1 [Propionibacterium acnes HL045PA1]
gi|422525088|ref|ZP_16601096.1| ribosomal protein L1 [Propionibacterium acnes HL053PA2]
gi|422525190|ref|ZP_16601194.1| ribosomal protein L1 [Propionibacterium acnes HL083PA1]
gi|422528762|ref|ZP_16604738.1| ribosomal protein L1 [Propionibacterium acnes HL053PA1]
gi|422530372|ref|ZP_16606332.1| ribosomal protein L1 [Propionibacterium acnes HL110PA1]
gi|422534000|ref|ZP_16609928.1| ribosomal protein L1 [Propionibacterium acnes HL072PA1]
gi|422538144|ref|ZP_16614023.1| ribosomal protein L1 [Propionibacterium acnes HL078PA1]
gi|422540729|ref|ZP_16616594.1| ribosomal protein L1 [Propionibacterium acnes HL013PA1]
gi|422540983|ref|ZP_16616842.1| ribosomal protein L1 [Propionibacterium acnes HL037PA1]
gi|422544832|ref|ZP_16620667.1| ribosomal protein L1 [Propionibacterium acnes HL082PA1]
gi|422547279|ref|ZP_16623100.1| ribosomal protein L1 [Propionibacterium acnes HL050PA3]
gi|422548725|ref|ZP_16624535.1| ribosomal protein L1 [Propionibacterium acnes HL050PA1]
gi|422553251|ref|ZP_16629037.1| ribosomal protein L1 [Propionibacterium acnes HL005PA3]
gi|422553684|ref|ZP_16629460.1| ribosomal protein L1 [Propionibacterium acnes HL005PA2]
gi|422556663|ref|ZP_16632414.1| ribosomal protein L1 [Propionibacterium acnes HL025PA2]
gi|422558891|ref|ZP_16634621.1| ribosomal protein L1 [Propionibacterium acnes HL005PA1]
gi|422563770|ref|ZP_16639445.1| ribosomal protein L1 [Propionibacterium acnes HL046PA1]
gi|422570264|ref|ZP_16645868.1| ribosomal protein L1 [Propionibacterium acnes HL067PA1]
gi|422579599|ref|ZP_16655118.1| ribosomal protein L1 [Propionibacterium acnes HL005PA4]
gi|289154792|gb|EFD03475.1| ribosomal protein L1 [Propionibacterium acnes SK187]
gi|289159082|gb|EFD07274.1| ribosomal protein L1 [Propionibacterium acnes J165]
gi|291375960|gb|ADD99814.1| ribosomal protein L1 [Propionibacterium acnes SK137]
gi|313763075|gb|EFS34439.1| ribosomal protein L1 [Propionibacterium acnes HL013PA1]
gi|313794082|gb|EFS42104.1| ribosomal protein L1 [Propionibacterium acnes HL110PA1]
gi|313802426|gb|EFS43651.1| ribosomal protein L1 [Propionibacterium acnes HL110PA2]
gi|313807841|gb|EFS46325.1| ribosomal protein L1 [Propionibacterium acnes HL087PA2]
gi|313812047|gb|EFS49761.1| ribosomal protein L1 [Propionibacterium acnes HL083PA1]
gi|313812127|gb|EFS49841.1| ribosomal protein L1 [Propionibacterium acnes HL025PA1]
gi|313819207|gb|EFS56921.1| ribosomal protein L1 [Propionibacterium acnes HL046PA2]
gi|313819754|gb|EFS57468.1| ribosomal protein L1 [Propionibacterium acnes HL036PA1]
gi|313823871|gb|EFS61585.1| ribosomal protein L1 [Propionibacterium acnes HL036PA2]
gi|313827232|gb|EFS64946.1| ribosomal protein L1 [Propionibacterium acnes HL063PA1]
gi|313828438|gb|EFS66152.1| ribosomal protein L1 [Propionibacterium acnes HL063PA2]
gi|313831104|gb|EFS68818.1| ribosomal protein L1 [Propionibacterium acnes HL007PA1]
gi|313833492|gb|EFS71206.1| ribosomal protein L1 [Propionibacterium acnes HL056PA1]
gi|313838126|gb|EFS75840.1| ribosomal protein L1 [Propionibacterium acnes HL086PA1]
gi|314914566|gb|EFS78397.1| ribosomal protein L1 [Propionibacterium acnes HL005PA4]
gi|314919190|gb|EFS83021.1| ribosomal protein L1 [Propionibacterium acnes HL050PA1]
gi|314920624|gb|EFS84455.1| ribosomal protein L1 [Propionibacterium acnes HL050PA3]
gi|314925737|gb|EFS89568.1| ribosomal protein L1 [Propionibacterium acnes HL036PA3]
gi|314931466|gb|EFS95297.1| ribosomal protein L1 [Propionibacterium acnes HL067PA1]
gi|314957026|gb|EFT01132.1| ribosomal protein L1 [Propionibacterium acnes HL027PA1]
gi|314957840|gb|EFT01943.1| ribosomal protein L1 [Propionibacterium acnes HL002PA1]
gi|314963363|gb|EFT07463.1| ribosomal protein L1 [Propionibacterium acnes HL082PA1]
gi|314969742|gb|EFT13840.1| ribosomal protein L1 [Propionibacterium acnes HL037PA1]
gi|314974287|gb|EFT18383.1| ribosomal protein L1 [Propionibacterium acnes HL053PA1]
gi|314976943|gb|EFT21038.1| ribosomal protein L1 [Propionibacterium acnes HL045PA1]
gi|314979901|gb|EFT23995.1| ribosomal protein L1 [Propionibacterium acnes HL072PA2]
gi|314985801|gb|EFT29893.1| ribosomal protein L1 [Propionibacterium acnes HL005PA1]
gi|314988416|gb|EFT32507.1| ribosomal protein L1 [Propionibacterium acnes HL005PA2]
gi|314988840|gb|EFT32931.1| ribosomal protein L1 [Propionibacterium acnes HL005PA3]
gi|315077098|gb|EFT49173.1| ribosomal protein L1 [Propionibacterium acnes HL053PA2]
gi|315079789|gb|EFT51765.1| ribosomal protein L1 [Propionibacterium acnes HL078PA1]
gi|315084903|gb|EFT56879.1| ribosomal protein L1 [Propionibacterium acnes HL027PA2]
gi|315087229|gb|EFT59205.1| ribosomal protein L1 [Propionibacterium acnes HL002PA3]
gi|315088962|gb|EFT60938.1| ribosomal protein L1 [Propionibacterium acnes HL072PA1]
gi|315096809|gb|EFT68785.1| ribosomal protein L1 [Propionibacterium acnes HL038PA1]
gi|315100570|gb|EFT72546.1| ribosomal protein L1 [Propionibacterium acnes HL046PA1]
gi|315109342|gb|EFT81318.1| ribosomal protein L1 [Propionibacterium acnes HL030PA2]
gi|327325649|gb|EGE67447.1| ribosomal protein L1 [Propionibacterium acnes HL096PA2]
gi|327328243|gb|EGE70010.1| ribosomal protein L1 [Propionibacterium acnes HL096PA3]
gi|327333167|gb|EGE74894.1| ribosomal protein L1 [Propionibacterium acnes HL097PA1]
gi|327445319|gb|EGE91973.1| ribosomal protein L1 [Propionibacterium acnes HL043PA1]
gi|327446960|gb|EGE93614.1| ribosomal protein L1 [Propionibacterium acnes HL043PA2]
gi|327449044|gb|EGE95698.1| ribosomal protein L1 [Propionibacterium acnes HL013PA2]
gi|327451390|gb|EGE98044.1| ribosomal protein L1 [Propionibacterium acnes HL092PA1]
gi|327452610|gb|EGE99264.1| ribosomal protein L1 [Propionibacterium acnes HL087PA3]
gi|327457653|gb|EGF04308.1| ribosomal protein L1 [Propionibacterium acnes HL083PA2]
gi|328751906|gb|EGF65522.1| ribosomal protein L1 [Propionibacterium acnes HL087PA1]
gi|328756948|gb|EGF70564.1| ribosomal protein L1 [Propionibacterium acnes HL020PA1]
gi|328759039|gb|EGF72655.1| ribosomal protein L1 [Propionibacterium acnes HL025PA2]
gi|328762260|gb|EGF75752.1| ribosomal protein L1 [Propionibacterium acnes HL099PA1]
gi|332676280|gb|AEE73096.1| 50S ribosomal protein L1 [Propionibacterium acnes 266]
gi|340767288|gb|EGR89813.1| ribosomal protein L1 [Propionibacterium sp. CC003-HC2]
gi|340772722|gb|EGR95223.1| ribosomal protein L1 [Propionibacterium acnes SK182]
gi|353556620|gb|EHC25990.1| 50S ribosomal protein L1 [Propionibacterium sp. 5_U_42AFAA]
gi|365740209|gb|AEW84411.1| ribosomal protein L1 [Propionibacterium acnes TypeIA2 P.acn31]
gi|365742453|gb|AEW82147.1| ribosomal protein L1 [Propionibacterium acnes TypeIA2 P.acn17]
gi|365744706|gb|AEW79903.1| ribosomal protein L1 [Propionibacterium acnes TypeIA2 P.acn33]
gi|379979496|gb|EIA12816.1| 50S ribosomal protein L1 [Propionibacterium acnes PRP-38]
gi|407904849|gb|AFU41679.1| 50S ribosomal protein L1 [Propionibacterium acnes C1]
gi|456738972|gb|EMF63539.1| 50S ribosomal protein L1 [Propionibacterium acnes FZ1/2/0]
Length = 232
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 154 HGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG ++ ++ F + E A ++ G VGD D I ++ G + F V+ P ++
Sbjct: 66 HGTGKTARVLVFAT-GEKAEAAREAGADEVGDDDLIAKVQGGYLD---FDSVVATPDMMG 121
Query: 212 DLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH--I 267
+ R+ +L R +P K+ T+ +D+ ++ G K + D Y++ H I
Sbjct: 122 KVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVSDIKGG-KIEFRTDR------YANLHFLI 174
Query: 268 GRLDMSQEQLEDNLKRILADISTMKP 293
G++ E+L +N L +I +KP
Sbjct: 175 GKVSFGSEKLAENYFAALDEILRLKP 200
>gi|384108291|ref|ZP_10009186.1| ribosomal protein L1 [Treponema sp. JC4]
gi|383870758|gb|EID86359.1| ribosomal protein L1 [Treponema sp. JC4]
Length = 226
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 27/141 (19%), Positives = 65/141 (46%), Gaps = 11/141 (7%)
Query: 157 DRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRI 216
++ ++ FC + + L D G G + I+ ++ G + F + P ++ D+ R+
Sbjct: 68 EKKVLVFCKEDKVKEAL-DAGATYAGSDEYIEKVKGGWLE---FDVCVATPDMMKDVGRL 123
Query: 217 RGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQ 274
+L ++ +P K+ T+ ++ L+ G + + + G +G+ M
Sbjct: 124 GMVLGRKGLMPNPKTGTVTPNVAQAVAELKKG-----RTEFRADKAGIVHIAVGKCSMDT 178
Query: 275 EQLEDNLKRILADISTMKPPS 295
+++ +N+K +L++I KP
Sbjct: 179 DKVVENVKTLLSEIGRKKPAG 199
>gi|223041762|ref|ZP_03611955.1| 50S ribosomal protein L1 [Actinobacillus minor 202]
gi|240948034|ref|ZP_04752451.1| 50S ribosomal protein L1 [Actinobacillus minor NM305]
gi|223017446|gb|EEF15864.1| 50S ribosomal protein L1 [Actinobacillus minor 202]
gi|240297650|gb|EER48127.1| 50S ribosomal protein L1 [Actinobacillus minor NM305]
Length = 229
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 70/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R+ +A +Q A + G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGRTARVAVFTQGANAEAAKAAGADLVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG+ D + EQL++NL+ +LA + KP +
Sbjct: 174 TIGKADFAPEQLKENLQALLAALVKAKPTT 203
>gi|429124011|ref|ZP_19184543.1| 50S ribosomal protein L1 [Brachyspira hampsonii 30446]
gi|426280172|gb|EKV57190.1| 50S ribosomal protein L1 [Brachyspira hampsonii 30446]
Length = 233
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 13/142 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+++ ++ F +Q E A + + G VG D I ++ G F I P ++ ++
Sbjct: 72 GKEKRVVVF-AQGEKADEAKAAGAVEVGFEDLIDKVKGGYTD---FDVAISTPDLMKEVG 127
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L ++ +P K+ T+ +D+ K + G ++Y K+ G IG+
Sbjct: 128 KLGQILGRKGLMPNPKTGTVTLDIAQAVKSFKAGRMEYRADKN------GIVRMGIGKAS 181
Query: 272 MSQEQLEDNLKRILADISTMKP 293
M QL +N K +I KP
Sbjct: 182 MDVSQLNENFKAFYDEILRKKP 203
>gi|319891502|ref|YP_004148377.1| 50S ribosomal protein L1 [Staphylococcus pseudintermedius HKU10-03]
gi|386320155|ref|YP_006016318.1| 50S ribosomal protein L1 [Staphylococcus pseudintermedius ED99]
gi|317161198|gb|ADV04741.1| LSU ribosomal protein L1p (L10Ae) [Staphylococcus pseudintermedius
HKU10-03]
gi|323465326|gb|ADX77479.1| ribosomal protein L1 [Staphylococcus pseudintermedius ED99]
Length = 231
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 16/154 (10%)
Query: 154 HGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG +S ++ F ++ + A+ + G VGD++ + I++G F V+ P ++
Sbjct: 67 HGTGKSQRVLVF-AKGDKIAEAEAAGADYVGDAEYVNKIQQGWFD---FDVVVATPDMMG 122
Query: 212 DLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIG 268
++ ++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG
Sbjct: 123 EVGKLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKA------GIVHASIG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPPSKPEDEDF 302
++ E+L +N K L D+ T PS + F
Sbjct: 177 KVSFETEKLVENFK-TLQDVLTKAKPSSAKGTYF 209
>gi|325269550|ref|ZP_08136166.1| 50S ribosomal protein L1 [Prevotella multiformis DSM 16608]
gi|324988169|gb|EGC20136.1| 50S ribosomal protein L1 [Prevotella multiformis DSM 16608]
Length = 230
Score = 38.9 bits (89), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 69/149 (46%), Gaps = 23/149 (15%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNPK 208
G+ ++ C+ + AA ++ G VG + + I+ G ++TMP+ C K
Sbjct: 70 GKVTRVLCLCTPDQEAAA-KEAGADYVGLDEYVDKIKGGWTDVDVIITMPS-----CMGK 123
Query: 209 I--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
+ L ++ RGL+ P KS T+ +D+ K ++ G K D + G
Sbjct: 124 LGPLGRILGPRGLM----PNPKSGTVTMDVAKAVKEVKQG-----KIDFKVDKAGIIHTS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ M+ EQ+ N K ++ + +KP +
Sbjct: 175 IGKVSMTAEQIYGNAKEFISTVIKLKPAA 203
>gi|253577167|ref|ZP_04854487.1| 50S ribosomal protein L1 [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251843411|gb|EES71439.1| 50S ribosomal protein L1 [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 230
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/123 (26%), Positives = 63/123 (51%), Gaps = 20/123 (16%)
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVIC--NPKILADLMRIRGLLKKR--IPTLKSQTLGVD 235
VGD D I I++G F+F +C P +++++ ++ LL + +P K+ T+ D
Sbjct: 94 FVGDQDMINKIQQGW-----FEFDVCVATPDMMSEVGKLGRLLGGKGLMPNPKAGTVTFD 148
Query: 236 LIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH--IGRLDMSQEQLEDNLKRILADISTMK 292
+ + ++ G I+Y + K Q H IG++ + EQL +NLK ++ ++ K
Sbjct: 149 VAKAVQEIKAGKIEYRLDKAGQ--------IHAPIGKVSFTAEQLNENLKALIDALNRAK 200
Query: 293 PPS 295
P +
Sbjct: 201 PAA 203
>gi|313887240|ref|ZP_07820934.1| ribosomal protein L1 [Porphyromonas asaccharolytica PR426713P-I]
gi|332299935|ref|YP_004441856.1| 50S ribosomal protein L1 [Porphyromonas asaccharolytica DSM 20707]
gi|312923293|gb|EFR34108.1| ribosomal protein L1 [Porphyromonas asaccharolytica PR426713P-I]
gi|332176998|gb|AEE12688.1| ribosomal protein L1 [Porphyromonas asaccharolytica DSM 20707]
Length = 234
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 67/147 (45%), Gaps = 19/147 (12%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNPK 208
G++ ++A C+ + A + Q+ G VG + I I+ G ++TMP+ V+
Sbjct: 70 GKEVRVLALCTPDKEA-EAQEAGADYVGLDEYINKIKSGWTDIDVIITMPS---VMGKIG 125
Query: 209 ILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIG 268
L ++ RGL+ P KS T+ DL K ++ G K D + G +G
Sbjct: 126 ALGRVLGPRGLM----PNPKSGTVTNDLGAAIKEVKAG-----KIDFKVDKAGIIHTSVG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPPS 295
++ +Q+ +N K + + +KP S
Sbjct: 177 KISFEPKQIRENAKEFIDTVVRLKPAS 203
>gi|319937661|ref|ZP_08012064.1| ribosomal protein L1 [Coprobacillus sp. 29_1]
gi|319807096|gb|EFW03710.1| ribosomal protein L1 [Coprobacillus sp. 29_1]
Length = 228
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 67/146 (45%), Gaps = 13/146 (8%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG ++ + +Q + + G +VG + ++ I++G + F+ +I P ++A+
Sbjct: 67 HGTGKTKKVLVITQGAKVEEAKAAGADVVGGKEILEDIQKGWLD---FEVMIATPDMMAE 123
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
L ++ +L K +P K+ T+ +D+ + + G + Y KD G IGR
Sbjct: 124 LGKLGRILGPKGLMPNPKTGTVTMDVTKAVQETKAGKVTYRTDKD------GNVHMPIGR 177
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
+ QL +N K + + KP S
Sbjct: 178 VSFEDAQLAENFKVVYDLLVKSKPSS 203
>gi|359404695|ref|ZP_09197519.1| ribosomal protein L1 [Prevotella stercorea DSM 18206]
gi|357560039|gb|EHJ41449.1| ribosomal protein L1 [Prevotella stercorea DSM 18206]
Length = 229
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 69/149 (46%), Gaps = 23/149 (15%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNPK 208
G+ ++A C+ + AA ++ G VG + I+ I+ G ++TMP+ C K
Sbjct: 69 GKVTRVLALCTPDQEAAA-KEAGADYVGLDEYIEKIKGGWTDIDVIITMPS-----CMGK 122
Query: 209 I--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
I + ++ RGL+ P KS T+ +D+ K ++ G K D + G
Sbjct: 123 IGPIGRILGPRGLM----PNPKSGTVTMDVAKAVKEVKQG-----KIDFKVDKAGIIHTS 173
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ + E + N K +A I +KP +
Sbjct: 174 IGKVSFTPEAIYQNAKEFIATIIKLKPAA 202
>gi|262370136|ref|ZP_06063463.1| 50S ribosomal protein L1 [Acinetobacter johnsonii SH046]
gi|262315175|gb|EEY96215.1| 50S ribosomal protein L1 [Acinetobacter johnsonii SH046]
Length = 231
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL------KKRIPTLKSQTLG 233
+VG D + I+ G + F VI P D MR+ G L + +P K T+
Sbjct: 94 IVGFDDLAESIQAGNLD---FDVVIAAP----DAMRVVGKLGTILGPRGLMPNPKVGTVT 146
Query: 234 VDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMK 292
D+ G K + G +Y + K G IG++D S E + N++ ++AD+ +K
Sbjct: 147 PDVAGAVKNAKAGQARYRVDK------AGIIHAAIGQVDFSAEAVRQNVETLIADLKKLK 200
Query: 293 PPSKPEDEDFITRILLWSEPSP 314
P + +I +I L S P
Sbjct: 201 PAT--SKGVYIKKITLSSTMGP 220
>gi|205354447|ref|YP_002228248.1| 50S ribosomal protein L1 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|375125330|ref|ZP_09770494.1| 50S ribosomal protein L1 [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|378957038|ref|YP_005214525.1| 50S ribosomal protein L1 [Salmonella enterica subsp. enterica
serovar Gallinarum/pullorum str. RKS5078]
gi|438122376|ref|ZP_20872269.1| 50S ribosomal protein L1 [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|445134697|ref|ZP_21383005.1| 50S ribosomal protein L1 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
gi|226724965|sp|B5RFK4.1|RL1_SALG2 RecName: Full=50S ribosomal protein L1
gi|205274228|emb|CAR39247.1| 50S ribosomal subunit protein L1 [Salmonella enterica subsp.
enterica serovar Gallinarum str. 287/91]
gi|326629580|gb|EGE35923.1| 50S ribosomal protein L1 [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|357207649|gb|AET55695.1| 50S ribosomal subunit protein L1 [Salmonella enterica subsp.
enterica serovar Gallinarum/pullorum str. RKS5078]
gi|434943107|gb|ELL49281.1| 50S ribosomal protein L1 [Salmonella enterica subsp. enterica
serovar Pullorum str. ATCC 9120]
gi|444846556|gb|ELX71720.1| 50S ribosomal protein L1 [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9184]
Length = 234
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG RS+ +A +Q A + G LVG D I++G + F VI +P D
Sbjct: 67 HGTGRSVRVAVFTQGPNAEAAKAAGAELVGMEDLADQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ GLL + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGLLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKP 293
IG++D ++L++NL+ +L + KP
Sbjct: 174 TIGKVDFDADKLKENLEALLVALKKAKP 201
>gi|118411124|ref|YP_874518.1| 50S ribosomal protein L1 [Thalassiosira pseudonana]
gi|224015784|ref|XP_002297540.1| RK1, ribosomal protein 1 [Thalassiosira pseudonana CCMP1335]
gi|125987547|sp|A0T0Q6.1|RK1_THAPS RecName: Full=50S ribosomal protein L1, chloroplastic
gi|116739871|gb|ABK20741.1| 50S ribosomal protein L1 [Thalassiosira pseudonana]
gi|220967804|gb|EED86180.1| RK1, ribosomal protein 1 [Thalassiosira pseudonana CCMP1335]
Length = 230
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 64/143 (44%), Gaps = 11/143 (7%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG +S+ IA + + + G +VG + I I +G + F ++ P ++
Sbjct: 67 HGIGKSMRIAVLTNEANFNEANEGGADIVGSQELIDDISQGNLN---FDLLVATPDMMPK 123
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
L ++ +L K +P+ KS T+ +L + G K+ K D G + G+
Sbjct: 124 LAKLGRVLGPKGLMPSPKSGTVSTNLTETLSDFKKG-KFEYKADKT----GVVHVNFGKA 178
Query: 271 DMSQEQLEDNLKRILADISTMKP 293
+ S++QL +NL + I +P
Sbjct: 179 NFSKDQLMENLTSLYQSIEQNRP 201
>gi|399155550|ref|ZP_10755617.1| 50S ribosomal protein L1 [SAR324 cluster bacterium SCGC AAA001-C10]
Length = 229
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G++ ++ F ++ E A Q+ G VG D K I+ G + F V+ P ++A +
Sbjct: 70 GKEVRVLVF-AKGEKAIAAQEAGADYVGGEDFAKKIQDGWLE---FDRVVATPDMMAVVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
RI +L R +P K+ T+ ++ + K ++ G +++ K G +G++
Sbjct: 126 RIGKILGPRGLMPNPKTGTVTFEVESVIKNIKAGQVEFRADK------LGNLHASVGKIS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
++L +N+ ++ + MKP S
Sbjct: 180 FDADKLCENISVLVDTVMRMKPSS 203
>gi|418423710|ref|ZP_12996857.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus VRS1]
gi|387722502|gb|EIK10300.1| 50S ribosomal protein L1 [Staphylococcus aureus subsp. aureus VRS1]
Length = 230
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ +S++ F + + A+ + G +G+++ ++ I++G F V+ P ++ ++
Sbjct: 70 GKSQSVLVFA-KGDKIAEAEAAGADYIGEAEYVQKIQQGWFD---FDVVVATPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKA------GIVHASIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
+ EQL +N + ++ KP S
Sbjct: 180 FTDEQLIENFNTLQDVLAKAKPSS 203
>gi|373461781|ref|ZP_09553518.1| 50S ribosomal protein L1 [Prevotella maculosa OT 289]
gi|371951069|gb|EHO68917.1| 50S ribosomal protein L1 [Prevotella maculosa OT 289]
Length = 230
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 23/149 (15%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNPK 208
G+ ++A C+ + AA ++ G G + ++ I+ G ++TMP+ C K
Sbjct: 70 GKTVRVLALCTPDQEAAA-KEAGADYAGLDEYVEKIKGGWTDIDVIITMPS-----CMGK 123
Query: 209 I--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
I L ++ RGL+ P KS T+ +D+ K ++ G K D + G
Sbjct: 124 IGPLGRVLGPRGLM----PNPKSGTVTMDVAKAVKEVKQG-----KIDFKVDKAGIIHTS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ M+ EQ+ N K + + +KP +
Sbjct: 175 IGKVSMTPEQIFGNAKEFIQTVIKLKPAA 203
>gi|346224273|ref|ZP_08845415.1| 50S ribosomal protein L1 [Anaerophaga thermohalophila DSM 12881]
Length = 231
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 73/162 (45%), Gaps = 13/162 (8%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G++ ++ C+ + + + G VG + I I+ G + F +I P ++A +
Sbjct: 70 GKETRVLVLCTPDKEE-EAKAAGADYVGLDEYIDKIKEGWLD---FDVIITMPSVMAKIG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
+ +L R +P KS T+ +D+ ++ G K D + +G +G++
Sbjct: 126 ALGRILGPRGLMPNPKSGTVTMDIAKAVSEVKAG-----KIDFKVDKYGIVHSTVGKVSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
S ++L +N++ + I +KP + +I I L S SP
Sbjct: 181 SPDKLAENVREFVGVIQKLKPSA--AKGTYIKSITLSSTMSP 220
>gi|423349773|ref|ZP_17327428.1| 50S ribosomal protein L1 [Scardovia wiggsiae F0424]
gi|393702265|gb|EJD64471.1| 50S ribosomal protein L1 [Scardovia wiggsiae F0424]
Length = 230
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 12/118 (10%)
Query: 181 VGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIG 238
VGD + I+ + +G F V+ P ++ + R+ +L R +P K+ T+ +D+
Sbjct: 95 VGDDELIEKVSKGYTD---FDAVVATPDMMGKVGRLGRVLGPRGLMPNPKTGTVTMDVAK 151
Query: 239 IAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
++ G I++ + KD G F IG+L + L +N + + +I +KP +
Sbjct: 152 AVADIKGGKIEFRVDKD------GNLSFIIGKLSFGDQDLVENFRSVADEIRRLKPAT 203
>gi|389816103|ref|ZP_10207290.1| 50S ribosomal protein L1 [Planococcus antarcticus DSM 14505]
gi|388465367|gb|EIM07685.1| 50S ribosomal protein L1 [Planococcus antarcticus DSM 14505]
Length = 232
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ +S++ F + E + + G VGD++ I+ I++G F ++ P ++ ++
Sbjct: 70 GKTQSVLVFA-KGEKLKEAEAAGADFVGDAEYIEKIQKGWFD---FDVIVATPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ D+ + ++ G ++Y K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTFDVTKAVQEIKAGKVEYRADKT------GIIHAPIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
+L +NL+ I + KP S
Sbjct: 180 FDDSKLAENLEAIYDVVQKAKPSS 203
>gi|409197415|ref|ZP_11226078.1| 50S ribosomal protein L1 [Marinilabilia salmonicolor JCM 21150]
Length = 231
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 79/176 (44%), Gaps = 23/176 (13%)
Query: 145 IVEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMP 198
+V + H G++ ++ C+ + + + G VG + I I+ G ++TMP
Sbjct: 62 VVTLPHG--TGKETKVLVLCTP-DKEEEAKAAGADYVGLDEYIDKIKEGWTDVDVIITMP 118
Query: 199 TFQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQ 258
+ V+ L ++ RGL+ P KS T+ +D+ ++ G K D +
Sbjct: 119 S---VMAKVGALGRILGPRGLM----PNPKSGTVTMDIAKAVSEVKAG-----KIDFKVD 166
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+G +G++ S ++L +N++ + +I +KP + +I I L S SP
Sbjct: 167 KYGIIHSTVGKVSFSPDKLTENVREFVGNIIKLKPSA--AKGTYIKSIALSSTMSP 220
>gi|281425128|ref|ZP_06256041.1| ribosomal protein L1 [Prevotella oris F0302]
gi|299141113|ref|ZP_07034250.1| ribosomal protein L1 [Prevotella oris C735]
gi|281400720|gb|EFB31551.1| ribosomal protein L1 [Prevotella oris F0302]
gi|298577073|gb|EFI48942.1| ribosomal protein L1 [Prevotella oris C735]
Length = 230
Score = 38.5 bits (88), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 69/149 (46%), Gaps = 23/149 (15%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNPK 208
G+ ++A C+ + AA ++ G G + ++ I+ G ++TMP+ C K
Sbjct: 70 GKTVRVLALCTPDQEAAA-KEAGADYAGLDEYVEKIKGGWTDIDVIITMPS-----CMGK 123
Query: 209 I--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
I L ++ RGL+ P KS T+ +D+ K ++ G K D + G
Sbjct: 124 IGPLGRVLGPRGLM----PNPKSGTVTMDVAKAVKEVKQG-----KIDFKVDKAGIIHTS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ M+ EQ+ N K + + +KP +
Sbjct: 175 IGKVSMTPEQIFGNAKEFIQTVIKLKPAA 203
>gi|323358916|ref|YP_004225312.1| 50S ribosomal protein L1 [Microbacterium testaceum StLB037]
gi|323275287|dbj|BAJ75432.1| ribosomal protein L1 [Microbacterium testaceum StLB037]
Length = 230
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 12/118 (10%)
Query: 181 VGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIG 238
VG +D I+ + G F + P+++ + R+ +L R +P K+ T+ +
Sbjct: 95 VGGTDLIEKVAAGYTA---FDAAVATPELMGQVGRLGKVLGPRGLMPNPKTGTVTPNPAK 151
Query: 239 IAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+ ++ G I++ + K F +G+ S EQL++NLK L +I +KP S
Sbjct: 152 AVEEIKGGKIEFRVDKHANVH------FVVGKASFSAEQLDENLKAALEEIIRLKPSS 203
>gi|213407344|ref|XP_002174443.1| mitochondrial 54S ribosomal protein MRPL1 [Schizosaccharomyces
japonicus yFS275]
gi|212002490|gb|EEB08150.1| 50S ribosomal protein L1 [Schizosaccharomyces japonicus yFS275]
Length = 240
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 87/212 (41%), Gaps = 35/212 (16%)
Query: 96 FQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVEVEHSFDHG 155
F+F+EA+ +R L R + ++ ++ T VK P V +
Sbjct: 36 FRFEEAIKYLRA------LTLGREYANFSITVNLDT----VKGSVPVRGYVRLPFP---E 82
Query: 156 EDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVIC-----NPKIL 210
+ +S I ++ + A Q + G +VG D I L+ F + IC + +L
Sbjct: 83 KKQSRICVIAEGQAAQQARQSGADVVGGKDIID-----LMKKRVFDYNICLAHTDSLNLL 137
Query: 211 ADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
D+ RI G + +P++K T D+I + K + + +K Q G +
Sbjct: 138 KDVARILGP-RNLMPSVKHGTASNDIISLVKTFKGTTPFRERKGMISQVIGPQSY----- 191
Query: 271 DMSQEQLEDNLKRILAD----ISTMKPPSKPE 298
S E+L NLK ILA IS M+ KP
Sbjct: 192 --SDEKLAANLKAILAGIRKCISKMEQKRKPR 221
>gi|381196796|ref|ZP_09904137.1| 50S ribosomal protein L1 [Acinetobacter lwoffii WJ10621]
Length = 231
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 63/142 (44%), Gaps = 22/142 (15%)
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL------KKRIPTLKSQTLG 233
+VG D + I+ G + F VI P D MR+ G L + +P K T+
Sbjct: 94 VVGFDDLAESIQAGNLD---FDVVIAAP----DAMRVVGKLGTILGPRGLMPNPKVGTVT 146
Query: 234 VDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMK 292
D+ G K + G +Y + K G IG++D S E + N++ ++AD+ +K
Sbjct: 147 PDVAGAVKNAKAGQARYRVDK------AGIIHAAIGQVDFSAEAVRQNVETLIADLKKLK 200
Query: 293 PPSKPEDEDFITRILLWSEPSP 314
P + +I +I L S P
Sbjct: 201 PAT--SKGVYIKKITLSSTMGP 220
>gi|384209818|ref|YP_005595538.1| 50S ribosomal protein L1 [Brachyspira intermedia PWS/A]
gi|343387468|gb|AEM22958.1| 50S ribosomal protein L1 [Brachyspira intermedia PWS/A]
Length = 233
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 67/142 (47%), Gaps = 13/142 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+++ ++ F +Q E A + + G VG D I ++ G F I P ++ ++
Sbjct: 72 GKEKRVVVF-AQGEKADEAKAAGAMEVGFEDLIDKVKGGYTD---FDVAIATPDLMKEVG 127
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L ++ +P K+ T+ +D+ K + G ++Y K+ G IG+
Sbjct: 128 KLGQILGRKGLMPNPKTGTVTLDIAQAVKSFKAGRMEYRADKN------GIVRMGIGKAS 181
Query: 272 MSQEQLEDNLKRILADISTMKP 293
M+ ++L +N K +I KP
Sbjct: 182 MTADKLNENFKVFYDEILRKKP 203
>gi|329907537|ref|ZP_08274678.1| LSU ribosomal protein L1p (L10Ae) [Oxalobacteraceae bacterium
IMCC9480]
gi|327546944|gb|EGF31849.1| LSU ribosomal protein L1p (L10Ae) [Oxalobacteraceae bacterium
IMCC9480]
Length = 231
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 65/149 (43%), Gaps = 21/149 (14%)
Query: 155 GEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADL 213
G +S+ +A + E A Q + G +VG D + I+ G MP F VI +P D
Sbjct: 68 GTGKSVRVAVFATGEKAEQAKAAGADIVGMEDLAEQIKAG--NMP-FDIVIASP----DT 120
Query: 214 MRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
MRI G L + +P K T+ D+ K + G ++Y K G
Sbjct: 121 MRIVGTLGQILGPRGLMPNPKVGTVTPDVATAVKNAKAGQVQYRTDKG------GIIHAT 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IGR + E L+ NL ++ ++ KP S
Sbjct: 175 IGRKSFTDEALKSNLVALIDALNKAKPTS 203
>gi|78484630|ref|YP_390555.1| 50S ribosomal protein L1 [Thiomicrospira crunogena XCL-2]
gi|91207384|sp|Q31IZ2.1|RL1_THICR RecName: Full=50S ribosomal protein L1
gi|78362916|gb|ABB40881.1| LSU ribosomal protein L1P [Thiomicrospira crunogena XCL-2]
Length = 231
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 17/106 (16%)
Query: 197 MPTFQFVICNPKILADLMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKY 249
M F VI +P D MR+ G+L + +P K+ T+ D++ K ++G +++
Sbjct: 110 MMDFDVVIASP----DAMRVVGMLGQVLGPRGLMPNPKTGTVTPDVVTAIKNAKSGQVRF 165
Query: 250 SMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
K G IG++D + E+L++NL ++ D++ KP +
Sbjct: 166 RADK------AGIVHASIGKVDFAPEKLKENLNALIEDLNKAKPAA 205
>gi|359786070|ref|ZP_09289210.1| 50S ribosomal protein L1 [Halomonas sp. GFAJ-1]
gi|359296563|gb|EHK60811.1| 50S ribosomal protein L1 [Halomonas sp. GFAJ-1]
Length = 230
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 77/172 (44%), Gaps = 23/172 (13%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A +Q A ++ G +VG D + +++G++ F VI +P D MR+ G L
Sbjct: 75 VAVFTQGANADAAKEAGADIVGMEDLAEQVKKGVMD---FDVVIASP----DAMRVVGQL 127
Query: 221 ------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+ +P K T+ D+ K + G +++ K+ G +G+ D
Sbjct: 128 GQILGPRGLMPNPKVGTVTPDVATAVKNAKAGQVRFRTDKN------GIIHTTLGKADFD 181
Query: 274 QEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKLDLSGLI 325
++ NL+ ++AD+ +KP S ++ ++ L + P +D S L+
Sbjct: 182 VTAVQGNLEALVADLKKLKPSS--SKGIYVKKVTLSTTMGP-GLTIDHSALV 230
>gi|340750768|ref|ZP_08687604.1| 50S ribosomal protein L1 [Fusobacterium mortiferum ATCC 9817]
gi|229421842|gb|EEO36889.1| 50S ribosomal protein L1 [Fusobacterium mortiferum ATCC 9817]
Length = 235
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 13/146 (8%)
Query: 154 HGEDRSI--IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG ++I +A S L G G + I I++G + F VI P ++
Sbjct: 68 HGTGKTIKVLAITSGANIEKALA-AGADYAGAEEYINQIQQGWLD---FDLVIATPDMMP 123
Query: 212 DLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGR 269
L R+ +L K +P KS T+ ++ + G K + + D G IG+
Sbjct: 124 KLGRLGKILGTKGLMPNPKSGTVTPNIAEAVTEFKKG-KLAFRVD----KLGSIHVPIGK 178
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
D + E++E+N K + I+ +KP S
Sbjct: 179 ADFAPEKIEENFKAFMDQITRLKPAS 204
>gi|406671626|ref|ZP_11078865.1| 50S ribosomal protein L1 [Facklamia hominis CCUG 36813]
gi|405580876|gb|EKB54935.1| 50S ribosomal protein L1 [Facklamia hominis CCUG 36813]
Length = 229
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 70/157 (44%), Gaps = 14/157 (8%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+ ++ A + Q+ G VG+ + I I G + F ++ P ++ + R+ +L
Sbjct: 75 VVVIAKGAKAQEAQEAGADFVGEEELINKINDGWLD---FDVMVATPDMMGQVGRLGRIL 131
Query: 221 --KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQL 277
K +P K+ T+ +D+ K ++ G + Y K G + IG++ ++L
Sbjct: 132 GPKGLMPNPKTGTVTMDVTKAVKDIKAGQVTYRADK------AGIVNVPIGKVSFDDQKL 185
Query: 278 EDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+N K + I +KP + +IT ++L + P
Sbjct: 186 LENFKALHETIVRVKPAT--AKGTYITNLVLTTTFGP 220
>gi|340356793|ref|ZP_08679434.1| 50S ribosomal protein L1 [Sporosarcina newyorkensis 2681]
gi|339620131|gb|EGQ24702.1| 50S ribosomal protein L1 [Sporosarcina newyorkensis 2681]
Length = 238
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 66/144 (45%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ + ++ F ++ E + + G VGD++ I I++G F ++ P ++ ++
Sbjct: 76 GKTQRVLVF-AKGEKLKEAEAAGADYVGDAEYIAKIQQGWFD---FDVIVATPDMMGEVG 131
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
+I +L K +P K+ T+ D+ + ++ G ++Y K G IG+
Sbjct: 132 KIGRVLGPKGLMPNPKTGTVTFDVAKAVEEIKAGKVEYRADKA------GIIHAPIGKAS 185
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
E+LE+N I I KP +
Sbjct: 186 FENEKLEENFLTIFDTIQKAKPAA 209
>gi|303327280|ref|ZP_07357722.1| ribosomal protein L1 [Desulfovibrio sp. 3_1_syn3]
gi|302863268|gb|EFL86200.1| ribosomal protein L1 [Desulfovibrio sp. 3_1_syn3]
Length = 243
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 67/144 (46%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ + FC + E A+ ++ G VG + + ++ G + F + P ++A +
Sbjct: 78 GKTVRVAVFC-KGEKQAEAKEAGADAVGAEELVAKVKEGWLE---FDAAVATPDVMALVG 133
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
+I LL R +P K+ ++ D+ L+ G +++ + K G +G++
Sbjct: 134 QIGRLLGPRGLMPNAKTGSVTFDVTKAVTELKAGRVEFKVDKA------GVLHAPLGKVS 187
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
E++ NLK +L ++ +KP +
Sbjct: 188 FGSEKILGNLKALLDTVNRLKPSA 211
>gi|237786431|ref|YP_002907136.1| 50S ribosomal protein L1 [Corynebacterium kroppenstedtii DSM 44385]
gi|259646151|sp|C4LL88.1|RL1_CORK4 RecName: Full=50S ribosomal protein L1
gi|237759343|gb|ACR18593.1| 50S ribosomal protein L1 [Corynebacterium kroppenstedtii DSM 44385]
Length = 237
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 68/143 (47%), Gaps = 15/143 (10%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G++ ++ F ++ A ++ G +VG ++ ++ I+ G F I P +A +
Sbjct: 70 GKEVRVVVF-AEGPNATAAEEAGADVVGTAELVERIQGGWTD---FDAAIATPDQMAKVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH--IGRL 270
R+ +L R +P K+ T+ D+ K ++ G K S + D ++ H +G+
Sbjct: 126 RVARVLGPRGLMPNPKTGTVTTDVTKAVKEIKGG-KISFRVDKA------ANLHAVLGKA 178
Query: 271 DMSQEQLEDNLKRILADISTMKP 293
S EQL +N ++ ++ +KP
Sbjct: 179 SFSAEQLAENYGALIDELLRVKP 201
>gi|110833236|ref|YP_692095.1| 50S ribosomal protein L1 [Alcanivorax borkumensis SK2]
gi|123345815|sp|Q0VSM5.1|RL1_ALCBS RecName: Full=50S ribosomal protein L1
gi|110646347|emb|CAL15823.1| 50S ribosomal protein L1 [Alcanivorax borkumensis SK2]
Length = 231
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 74/169 (43%), Gaps = 23/169 (13%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG +++ +A +Q A + ++ G +VG D + ++ G + F VI +P D
Sbjct: 67 HGTGKTVRVAVFAQGAKAEEAKEAGADVVGFDDLAEQVQGGEIN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ D+ K + G ++Y K G
Sbjct: 120 AMRVVGKLGTILGPRGLMPNPKVGTVTPDVAQAVKNAKGGQVRYRTDKG------GIIHC 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
+G++ +++N++ ++AD+ KP S F ++ L + P
Sbjct: 174 TVGQVGFDTNAIKENVEALIADLKKAKPSS--AKGTFFKKVTLSTTMGP 220
>gi|395205622|ref|ZP_10396253.1| ribosomal protein L1 [Propionibacterium humerusii P08]
gi|422441428|ref|ZP_16518238.1| ribosomal protein L1 [Propionibacterium acnes HL037PA3]
gi|422472386|ref|ZP_16548874.1| ribosomal protein L1 [Propionibacterium acnes HL037PA2]
gi|422572076|ref|ZP_16647647.1| ribosomal protein L1 [Propionibacterium acnes HL044PA1]
gi|313835996|gb|EFS73710.1| ribosomal protein L1 [Propionibacterium acnes HL037PA2]
gi|314929672|gb|EFS93503.1| ribosomal protein L1 [Propionibacterium acnes HL044PA1]
gi|314970505|gb|EFT14603.1| ribosomal protein L1 [Propionibacterium acnes HL037PA3]
gi|328906258|gb|EGG26033.1| ribosomal protein L1 [Propionibacterium humerusii P08]
Length = 232
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 15/145 (10%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ ++ F + E A ++ G VGD D I ++ G + F V+ P ++ +
Sbjct: 69 GKTARVLVFAT-GEKAEAAREAGADEVGDDDLIAKVQGGYLD---FDSVVATPDMMGKVG 124
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH--IGRL 270
R+ +L R +P K+ T+ +D+ ++ G K + D Y++ H IG++
Sbjct: 125 RLGRVLGPRGLMPNPKTGTVTMDVAKAVSDIKGG-KIEFRTDR------YANLHFLIGKV 177
Query: 271 DMSQEQLEDNLKRILADISTMKPPS 295
E+L +N L +I +KP +
Sbjct: 178 SFGSEKLTENYFAALDEILRLKPSA 202
>gi|127511082|ref|YP_001092279.1| 50S ribosomal protein L1 [Shewanella loihica PV-4]
gi|160166309|sp|A3Q972.1|RL1_SHELP RecName: Full=50S ribosomal protein L1
gi|126636377|gb|ABO22020.1| LSU ribosomal protein L1P [Shewanella loihica PV-4]
Length = 233
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 66/150 (44%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A ++ G LVG + ++ G + F VI +P D
Sbjct: 67 HGTGREVRVAVFTQGANADAAKEAGAELVGMDELAAQVKAGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K+ T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKTGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++D QL++NL +L + KP +
Sbjct: 174 TIGKVDFEPVQLKENLDALLGALIKAKPAA 203
>gi|83319637|ref|YP_424061.1| 50S ribosomal protein L1 [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
gi|91207357|sp|Q2ST52.1|RL1_MYCCT RecName: Full=50S ribosomal protein L1
gi|83283523|gb|ABC01455.1| ribosomal protein L1 [Mycoplasma capricolum subsp. capricolum ATCC
27343]
Length = 226
Score = 38.1 bits (87), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Query: 200 FQFVICNPKILADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQ 256
F ++ P+++A L I +L K +P K+ T+ +D+ ++ G ++Y K+
Sbjct: 111 FDIIVATPEMMAKLGAIGKILGPKGLMPNPKTGTVTMDVAKAVDDIKKGKVEYRADKE-- 168
Query: 257 EQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
G IG++ E+LE+N K ++ +I +KP + D+I I L + P
Sbjct: 169 ----GNIHLIIGKVSFEAEKLEENFKAVIDEIRRVKPQT--VKGDYIKNITLSTTMGP 220
>gi|319953896|ref|YP_004165163.1| 50S ribosomal protein L1 [Cellulophaga algicola DSM 14237]
gi|319422556|gb|ADV49665.1| LSU ribosomal protein L1P [Cellulophaga algicola DSM 14237]
Length = 229
Score = 38.1 bits (87), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 103/234 (44%), Gaps = 31/234 (13%)
Query: 87 LQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIV 146
L K K +I+ E A I+E + +A A+VE++ K +V
Sbjct: 12 LSKIDKNKIYSLAEGSALIKE--------ITKAKFDASVELAVRLGVDPRKANQMVRGVV 63
Query: 147 EVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTF 200
+ H G+D ++A + + A + ++ G VG + ++ I+ G ++TMP+
Sbjct: 64 TLPHG--TGKDVKVLALVTPDKEA-EAKEAGADFVGLDEYLEKIKGGWTDVDVIITMPS- 119
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
V+ L ++ RGL+ P K+ T+ +D+ ++ G K D +
Sbjct: 120 --VMGKLGPLGRVLGPRGLM----PNPKTGTVTMDVAKAVAEVKAG-----KIDFKVDKT 168
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
G IG++ S++++ +N K ++ ++ +KP + +I I + S SP
Sbjct: 169 GIVHAAIGKVSFSEDKIYENAKELIDTLNKLKPTA--SKGIYIKSIFMSSTMSP 220
>gi|384227492|ref|YP_005619237.1| 50S ribosomal protein L1 [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
gi|345538432|gb|AEO08409.1| 50S ribosomal protein L1 [Buchnera aphidicola str. Ak
(Acyrthosiphon kondoi)]
Length = 231
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 15/146 (10%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNP---KI 209
+G RSI +A +Q ++ G LVG D + I++ + F VI +P K+
Sbjct: 67 NGIGRSIRVAVFTQGHNIEIAKNAGAELVGMEDLAEKIKKEGIN---FDVVIASPDAMKV 123
Query: 210 LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIG 268
+ L +I G + +P K T+ ++ K +TG ++Y K+ G IG
Sbjct: 124 VTQLGQILGP-RNLMPNPKLGTITTNIAEAIKNAKTGQVRYRNDKN------GIIHATIG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPP 294
R++ ++Q+++N L I KPP
Sbjct: 177 RINFDKDQIKENFNVFLESIKKAKPP 202
>gi|262038187|ref|ZP_06011581.1| ribosomal protein L1 [Leptotrichia goodfellowii F0264]
gi|261747768|gb|EEY35213.1| ribosomal protein L1 [Leptotrichia goodfellowii F0264]
Length = 235
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 63/145 (43%), Gaps = 11/145 (7%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG ++I I + E + + G GD + I I+ G + F VI P ++
Sbjct: 67 HGTGKTIKILVITSGENIQKALNAGADYAGDDEYISKIQGGWME---FDLVIATPDMMPK 123
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
L ++ L K +P KS T+ D+ + + G K + K D G IG++
Sbjct: 124 LGKLGKTLGTKGLMPNPKSGTVTTDVEKTVEEFKKG-KVAFKVD----KLGSIHLPIGKV 178
Query: 271 DMSQEQLEDNLKRILADISTMKPPS 295
+ ++ + DN K L I +KP +
Sbjct: 179 NFDKQAIVDNFKVALDQIIKLKPSA 203
>gi|32265863|ref|NP_859895.1| 50S ribosomal protein L1 [Helicobacter hepaticus ATCC 51449]
gi|61214655|sp|Q7VJ79.1|RL1_HELHP RecName: Full=50S ribosomal protein L1
gi|33316779|gb|AAQ04635.1|AF444004_1 P25 [Helicobacter hepaticus]
gi|32261912|gb|AAP76961.1| ribosomal protein L1 [Helicobacter hepaticus ATCC 51449]
Length = 234
Score = 38.1 bits (87), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 71/146 (48%), Gaps = 13/146 (8%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG + + +A ++ A + ++ G +VG D + I+ G + F VI P ++A
Sbjct: 68 HGTGKKVRVAVFAKGIKADEAKNAGADVVGADDLAEEIKNGNIN---FDMVIATPDMMAL 124
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGR 269
+ ++ +L K +P K+ T+ +D+ ++G + + + K G IG+
Sbjct: 125 VGKVGRILGPKGLMPNPKTGTVTIDVAKAVANAKSGQVNFRVDKK------GIIHAPIGK 178
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
++E++ DN+ ++ I+ +KP S
Sbjct: 179 ASFNEEKILDNMLELVRAINRLKPTS 204
>gi|333985470|ref|YP_004514680.1| 50S ribosomal protein L1 [Methylomonas methanica MC09]
gi|333809511|gb|AEG02181.1| ribosomal protein L1 [Methylomonas methanica MC09]
Length = 231
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 68/148 (45%), Gaps = 21/148 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
+G +++ +A +Q A ++ G +VG D + ++RG + F VI +P D
Sbjct: 67 NGTGKTVRVAVFTQGPNADAAKEAGADVVGMDDLAEQVKRGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ D+ K ++G ++Y K G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKVGTVTPDVATAVKNAKSGQVRYRTDKS------GIIHC 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKP 293
IG++ + ++ NL+ ++AD+ KP
Sbjct: 174 SIGKVSFDENAIKQNLEFLIADLKKAKP 201
>gi|134096331|ref|YP_001101406.1| 50S ribosomal protein L1 [Herminiimonas arsenicoxydans]
gi|160166112|sp|A4G9U8.1|RL1_HERAR RecName: Full=50S ribosomal protein L1
gi|133740234|emb|CAL63285.1| 50S ribosomal subunit protein L1 [Herminiimonas arsenicoxydans]
Length = 231
Score = 38.1 bits (87), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 21/148 (14%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D + F + E A Q + G +VG D + I+ G MP F VI +P D M
Sbjct: 70 GKDVRVAVFAT-GEKAEQAKAAGADIVGMEDLAESIKAG--NMP-FDIVIASP----DTM 121
Query: 215 RIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHI 267
RI G L + +P K T+ D+ K + G ++Y K G I
Sbjct: 122 RIVGTLGQILGPRGMMPNPKVGTVTPDVATAVKNAKAGQVQYRTDK------AGIIHATI 175
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPS 295
GR + E L+ NL ++ ++ KP +
Sbjct: 176 GRKSFTDEALKSNLLALIDALTKAKPAT 203
>gi|406903342|gb|EKD45452.1| 50S ribosomal protein L1 [uncultured bacterium]
Length = 232
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 73/169 (43%), Gaps = 23/169 (13%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + + +Q + A + G +VG D + I++G++ F +I P D
Sbjct: 67 HGTGRKVRVGVFAQGDYAEAAKAAGAEVVGFDDLSEKIKQGIID---FDILIATP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ D+ K + G + Y K G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKVGTVTTDVATAVKNAKGGQVSYRADKG------GVVHC 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
IG+++ + E L DNL +L D+ +KP S +I ++ L S P
Sbjct: 174 VIGKINFTTEALRDNLNVLLNDLKRVKPSS--SKGIYIKKVSLSSTMGP 220
>gi|169839872|ref|ZP_02873060.1| 50S ribosomal protein L1 [candidate division TM7 single-cell
isolate TM7a]
Length = 237
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 89/213 (41%), Gaps = 27/213 (12%)
Query: 88 QKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIVE 147
QK K++++ +EAL + ET TVE++ +DP +
Sbjct: 13 QKVDKMKVYTPEEALDLVFETKSAKFVE--------TVELAIRLG------VDPRHADQQ 58
Query: 148 VEH--SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVI 204
V S +G +++ I + E + G GD + I I+ G + F VI
Sbjct: 59 VRGTVSLPNGTGKTVRILAITSGENIDKALAAGADFAGDDEYINKIQGGWLD---FDLVI 115
Query: 205 CNPKILADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGY 262
P ++ L R+ +L K +P KS T+ ++ + + G K + K D G
Sbjct: 116 ATPDMMPKLGRLGRILGTKGLMPNPKSGTVTTNIEQTVQEFKKG-KVAFKVD----KLGS 170
Query: 263 SDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++D ++E + +N K L I +KP +
Sbjct: 171 IHLPIGKVDFTKEAIVENFKVALDQIIKLKPAT 203
>gi|585871|sp|Q07976.1|RL1_STRSF RecName: Full=50S ribosomal protein L1
gi|303916|dbj|BAA03345.1| L1 equivalent ribosomal protein [Streptomyces sp. FRI-5]
Length = 242
Score = 38.1 bits (87), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 14/121 (11%)
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLI 237
+VGD + I I +G + F V+ P ++ + R+ +L R +P K+ T+ +D+
Sbjct: 93 IVGDDELINEIAKG-NRLNEFDAVVATPDLMGKVGRLGRVLGPRGLMPNPKTGTVTMDVA 151
Query: 238 GIAKRLQTG-IKYSMKKDPQEQDFGYSDFH--IGRLDMSQEQLEDNLKRILADISTMKPP 294
++ G I++ + K +S+ H IG++ S EQL +N L +I +KP
Sbjct: 152 KAVTDIKGGKIEFRVDK--------HSNLHFIIGKVSFSDEQLVENYAAALDEIVRLKPS 203
Query: 295 S 295
+
Sbjct: 204 A 204
>gi|399524664|ref|ZP_10765186.1| ribosomal protein L1 [Atopobium sp. ICM58]
gi|398374051|gb|EJN51808.1| ribosomal protein L1 [Atopobium sp. ICM58]
Length = 235
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 151 SFDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
S HG ++ ++ F A + D G VG + I+ + +G F + P
Sbjct: 64 SLPHGTGKTARVLVFAVGPR-AQEAIDAGADEVGGDELIEKVAKGYTD---FDVAVATPD 119
Query: 209 ILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
++ + R+ +L R +P K+ T+ +D+ K ++ G I++ + K F
Sbjct: 120 LMGKVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVKEIKGGRIEFRVDKHANLA------F 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G+ + EQL +N +L ++ +KP S
Sbjct: 174 IVGKASFTAEQLTENYAAVLDEVLRLKPSS 203
>gi|333895348|ref|YP_004469223.1| 50S ribosomal protein L1 [Alteromonas sp. SN2]
gi|332995366|gb|AEF05421.1| ribosomal protein L1 [Alteromonas sp. SN2]
Length = 231
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 20/142 (14%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A +Q A ++ G +VG D + +++G + F V+ +P D MR+ G L
Sbjct: 75 VAVFTQGANAEAAKEAGADIVGMEDLAEQVKKGEMN---FDVVVASP----DAMRVVGQL 127
Query: 221 ------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+ +P K+ T+ D+ K + G ++Y K+ G IG++
Sbjct: 128 GQILGPRGLMPNPKTGTVTPDVATAVKNAKAGQVRYRNDKN------GIIHASIGKIAFE 181
Query: 274 QEQLEDNLKRILADISTMKPPS 295
Q+++NL+ +L + KP S
Sbjct: 182 TNQIQENLEALLEALKKAKPSS 203
>gi|114778900|ref|ZP_01453697.1| 50S ribosomal protein L1 [Mariprofundus ferrooxydans PV-1]
gi|114550869|gb|EAU53435.1| 50S ribosomal protein L1 [Mariprofundus ferrooxydans PV-1]
Length = 221
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 68/149 (45%), Gaps = 13/149 (8%)
Query: 151 SFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
+ HG +++ +A ++ A + G +VG D ++ ++ G + F V+ P +
Sbjct: 56 ALPHGTGKTVRVAVFAKGAKAEEALAAGADVVGADDLVEKVQGGFLE---FDRVVATPDM 112
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH 266
+A + R+ +L R +P K T+ +D+ ++ G I+ + K G
Sbjct: 113 MAQVGRLGRVLGPRGLMPNPKLGTVTMDVTKAVVAIKAGQIEVRVDK------AGVIHAP 166
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
GR QL +NL +L +++ MKP S
Sbjct: 167 FGRRSFDATQLSENLDALLQELNRMKPSS 195
>gi|119478597|ref|ZP_01618519.1| 50S ribosomal protein L1 [marine gamma proteobacterium HTCC2143]
gi|119448432|gb|EAW29682.1| 50S ribosomal protein L1 [marine gamma proteobacterium HTCC2143]
Length = 231
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 80/185 (43%), Gaps = 16/185 (8%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V + HG + +A +Q A + G LVG D + ++ G + F
Sbjct: 57 QVVRGATTLPHGTGSEVRVAVFAQGANAEKATAAGADLVGMDDLAEQVKAGKLD---FDV 113
Query: 203 VICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQD 259
VI P + + ++ +L R +P K+ T+ D+ K + G ++Y + K+
Sbjct: 114 VIAEPAAMRVVGQLGTILGPRGLMPNPKTGTVTPDVETAVKNAKAGQVRYRIDKN----- 168
Query: 260 FGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFKL 319
G IG+L L++NL+ ++ D+ KP + ++ +++L S P L
Sbjct: 169 -GIIHGAIGKLTFDASALKENLEALIGDLQKAKPSA--AKGVYLKKMVLSSTMGP-GLAL 224
Query: 320 DLSGL 324
D S L
Sbjct: 225 DQSSL 229
>gi|283769314|ref|ZP_06342214.1| ribosomal protein L1 [Bulleidia extructa W1219]
gi|283104090|gb|EFC05473.1| ribosomal protein L1 [Bulleidia extructa W1219]
Length = 225
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 60/136 (44%), Gaps = 12/136 (8%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+ +Q + + G VG D I I RG F ++ P ++ L ++ +L
Sbjct: 73 VLVITQGAKEEEAKAAGADFVGGKDMIDEISRGWFG---FDIIVATPDMMGQLGKLGKVL 129
Query: 221 --KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQL 277
K +P K+ T+ +D+ ++ G ++Y + +D G + +G+ S+EQL
Sbjct: 130 GPKGLMPNPKTGTVTMDVTKAIDEIKKGKVEYRVDRD------GNINVLVGKTSFSEEQL 183
Query: 278 EDNLKRILADISTMKP 293
+N K + I +P
Sbjct: 184 AENYKALYDVIVKARP 199
>gi|406598425|ref|YP_006749555.1| 50S ribosomal protein L1 [Alteromonas macleodii ATCC 27126]
gi|407685417|ref|YP_006800591.1| 50S ribosomal protein L1 [Alteromonas macleodii str. 'English
Channel 673']
gi|406375746|gb|AFS39001.1| 50S ribosomal protein L1 [Alteromonas macleodii ATCC 27126]
gi|407247028|gb|AFT76214.1| 50S ribosomal protein L1 [Alteromonas macleodii str. 'English
Channel 673']
Length = 231
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 20/142 (14%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A +Q A ++ G +VG D + +++G + F V+ +P D MR+ G L
Sbjct: 75 VAVFTQGANAEAAKEAGADIVGMDDLAEQVKKGEMN---FDVVVASP----DAMRVVGQL 127
Query: 221 ------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+ +P K+ T+ D+ K + G ++Y K+ G IG++
Sbjct: 128 GQILGPRGLMPNPKTGTVTPDVATAVKNAKAGQVRYRNDKN------GIIHASIGKIAFE 181
Query: 274 QEQLEDNLKRILADISTMKPPS 295
Q+++NL+ +L + KP S
Sbjct: 182 ANQIQENLEALLEALKKAKPSS 203
>gi|257126637|ref|YP_003164751.1| 50S ribosomal protein L1 [Leptotrichia buccalis C-1013-b]
gi|257050576|gb|ACV39760.1| ribosomal protein L1 [Leptotrichia buccalis C-1013-b]
Length = 235
Score = 38.1 bits (87), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 62/143 (43%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ I+A S L G GD + I I+ G + F VI P ++ L
Sbjct: 70 GKTVRILAITSGENIDKALA-AGADFAGDDEYINKIQNGWLD---FDLVIATPDMMPKLG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
R+ +L K +P KS T+ ++ + + G K + K D G IG++D
Sbjct: 126 RLGRILGTKGLMPNPKSGTVTTNIEQTIQEFKKG-KVAFKVD----KLGSIHLPIGKVDF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
++E + +N K L I +KP +
Sbjct: 181 TKEAIVENFKVALDQIIKLKPAA 203
>gi|410863308|ref|YP_006978542.1| 50S ribosomal protein L1 [Alteromonas macleodii AltDE1]
gi|410820570|gb|AFV87187.1| 50S ribosomal protein L1 [Alteromonas macleodii AltDE1]
Length = 231
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 20/142 (14%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A +Q A ++ G +VG D + +++G + F V+ +P D MR+ G L
Sbjct: 75 VAVFTQGANAEAAKEAGADIVGMDDLAEQVKKGEMN---FDVVVASP----DAMRVVGQL 127
Query: 221 ------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+ +P K+ T+ D+ K + G ++Y K+ G IG++
Sbjct: 128 GQILGPRGLMPNPKTGTVTPDVATAVKNAKAGQVRYRNDKN------GIIHASIGKIAFE 181
Query: 274 QEQLEDNLKRILADISTMKPPS 295
Q+++NL+ +L + KP S
Sbjct: 182 ANQIQENLEALLEALKKAKPSS 203
>gi|409357814|ref|ZP_11236183.1| 50S ribosomal protein L1 [Dietzia alimentaria 72]
Length = 240
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 88/208 (42%), Gaps = 25/208 (12%)
Query: 92 KLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEIST--TTHQKKVKYMDPWTHIVEVE 149
+ +++ +ALA +ET M ATVE++ +K M T V
Sbjct: 17 RTKLYSPLDALALAKETSSTKMD--------ATVEVAMRLGVDSRKADQMVRGT----VN 64
Query: 150 HSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKI 209
G+ ++ F + E A + + G VG + I+ I+ G + F I P
Sbjct: 65 LPNGTGKTARVVVFAA-GEKATEAEAAGADAVGSEELIEKIQGGWLD---FDAAIATPDQ 120
Query: 210 LADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHI 267
+A + R+ +L R +P K+ T+ +D+ ++ G K + + D F +
Sbjct: 121 MAKVGRVARVLGPRGLMPNPKTGTVTMDVTKAVADIKGG-KVTFRTDKANN----LHFIV 175
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPS 295
G+ + EQL +N + + +I +KP S
Sbjct: 176 GKASFTTEQLTENYQAAMDEIMRLKPSS 203
>gi|407689355|ref|YP_006804528.1| 50S ribosomal protein L1 [Alteromonas macleodii str. 'Balearic Sea
AD45']
gi|407292735|gb|AFT97047.1| 50S ribosomal protein L1 [Alteromonas macleodii str. 'Balearic Sea
AD45']
Length = 231
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 20/142 (14%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A +Q A ++ G +VG D + +++G + F V+ +P D MR+ G L
Sbjct: 75 VAVFTQGANAEAAKEAGADIVGMDDLAEQVKKGEMN---FDVVVASP----DAMRVVGQL 127
Query: 221 ------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+ +P K+ T+ D+ K + G ++Y K+ G IG++
Sbjct: 128 GQILGPRGLMPNPKTGTVTPDVATAVKNAKAGQVRYRNDKN------GIIHASIGKIAFE 181
Query: 274 QEQLEDNLKRILADISTMKPPS 295
Q+++NL+ +L + KP S
Sbjct: 182 ANQIQENLEALLEALKKAKPSS 203
>gi|340504357|gb|EGR30806.1| ribosomal protein, putative [Ichthyophthirius multifiliis]
Length = 249
Score = 38.1 bits (87), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 152 FDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
F G+ + + F S++ + ++ D G + GD + IK I+ G++ F+ +I P+ L
Sbjct: 72 FGLGKQKKVCVFASEY-SKQKVLDSGADMFGDDEVIKNIKNGVI---NFEQIISTPEGLI 127
Query: 212 DL---MRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH-- 266
L RI G K +P +K L + ++L+ IK + Q + S+ H
Sbjct: 128 KLKPYARILG-PKGLMPNVKIGNLVEE-----EKLEETIKNAKIGQVQFRVDPGSNIHSP 181
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G++ +S +Q+ NL+ +L + KP S
Sbjct: 182 LGKITLSDKQIVGNLQSLLNTLIQKKPDS 210
>gi|89893202|ref|YP_516689.1| 50S ribosomal protein L1 [Desulfitobacterium hafniense Y51]
gi|219666475|ref|YP_002456910.1| 50S ribosomal protein L1 [Desulfitobacterium hafniense DCB-2]
gi|423073146|ref|ZP_17061889.1| ribosomal protein L1 [Desulfitobacterium hafniense DP7]
gi|122483931|sp|Q250P7.1|RL1_DESHY RecName: Full=50S ribosomal protein L1
gi|254799845|sp|B8G1V1.1|RL1_DESHD RecName: Full=50S ribosomal protein L1
gi|89332650|dbj|BAE82245.1| 50S ribosomal protein L1 [Desulfitobacterium hafniense Y51]
gi|219536735|gb|ACL18474.1| ribosomal protein L1 [Desulfitobacterium hafniense DCB-2]
gi|361855976|gb|EHL07910.1| ribosomal protein L1 [Desulfitobacterium hafniense DP7]
Length = 230
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 68/144 (47%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ RS++ F ++ + A + + G VG D I IE+G F V+ P ++ +
Sbjct: 70 GKTRSVLVF-AKGDKAKEAEAAGADFVGAEDMIAKIEQGWFG---FDVVVATPDMMGMVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ D+ K ++ G I+Y K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTFDVAKAVKEIKAGKIEYRADKA------GIIHAPIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
S+EQL N K ++ + KP +
Sbjct: 180 FSEEQLYQNYKVLVETLVKAKPAA 203
>gi|407701644|ref|YP_006826431.1| 50S ribosomal protein L1 [Alteromonas macleodii str. 'Black Sea
11']
gi|407250791|gb|AFT79976.1| 50S ribosomal protein L1 [Alteromonas macleodii str. 'Black Sea
11']
Length = 231
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 20/142 (14%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A +Q A ++ G +VG D + +++G + F V+ +P D MR+ G L
Sbjct: 75 VAVFTQGANAEAAKEAGADIVGMDDLAEQVKKGEMN---FDVVVASP----DAMRVVGQL 127
Query: 221 ------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+ +P K+ T+ D+ K + G ++Y K+ G IG++
Sbjct: 128 GQILGPRGLMPNPKTGTVTPDVATAVKNAKAGQVRYRNDKN------GIIHASIGKIAFE 181
Query: 274 QEQLEDNLKRILADISTMKPPS 295
Q+++NL+ +L + KP S
Sbjct: 182 ANQIQENLEALLEALKKAKPSS 203
>gi|301320534|gb|ADK69177.1| ribosomal protein L1 [Mycoplasma mycoides subsp. mycoides SC str.
Gladysdale]
Length = 226
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Query: 200 FQFVICNPKILADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQ 256
F ++ P+++A L I +L K +P K+ T+ +D+ ++ G ++Y K+
Sbjct: 111 FDIIVATPEMMAKLGAIGKILGPKGLMPNPKTGTVTIDVAKAVDDIKKGKVEYRADKE-- 168
Query: 257 EQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
G IG++ E+LE+N K ++ +I +KP + D+I I L + P
Sbjct: 169 ----GNIHLIIGKVSFEIEKLEENFKAVIDEIRRVKPQT--VKGDYIKNITLSTTMGP 220
>gi|154508678|ref|ZP_02044320.1| hypothetical protein ACTODO_01183 [Actinomyces odontolyticus ATCC
17982]
gi|293189021|ref|ZP_06607753.1| ribosomal protein L1 [Actinomyces odontolyticus F0309]
gi|399526314|ref|ZP_10766099.1| ribosomal protein L1 [Actinomyces sp. ICM39]
gi|153798312|gb|EDN80732.1| ribosomal protein L1 [Actinomyces odontolyticus ATCC 17982]
gi|292822052|gb|EFF80979.1| ribosomal protein L1 [Actinomyces odontolyticus F0309]
gi|398363144|gb|EJN46788.1| ribosomal protein L1 [Actinomyces sp. ICM39]
Length = 235
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 151 SFDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
S HG ++ ++ F A + D G VG + I+ + +G F + P
Sbjct: 64 SLPHGTGKTARVLVFAVGPR-AQEAIDAGADEVGGDELIEKVAKGYTD---FDVAVATPD 119
Query: 209 ILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
++ + R+ +L R +P K+ T+ +D+ K ++ G I++ + K F
Sbjct: 120 LMGKVGRLGRVLGPRGLMPNPKTGTVTMDVAKAVKEIKGGRIEFRVDKHANLA------F 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G+ + EQL +N +L ++ +KP S
Sbjct: 174 IVGKASFTAEQLTENYAAVLDEVLRLKPTS 203
>gi|34762880|ref|ZP_00143863.1| LSU ribosomal protein L1P [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|237740926|ref|ZP_04571407.1| LSU ribosomal protein L1P [Fusobacterium sp. 4_1_13]
gi|256846759|ref|ZP_05552215.1| ribosomal protein L1 [Fusobacterium sp. 3_1_36A2]
gi|294784290|ref|ZP_06749584.1| ribosomal protein L1 [Fusobacterium sp. 3_1_27]
gi|421145121|ref|ZP_15605015.1| 50S ribosomal protein L1 [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
gi|27887444|gb|EAA24531.1| LSU ribosomal protein L1P [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|229430970|gb|EEO41182.1| LSU ribosomal protein L1P [Fusobacterium sp. 4_1_13]
gi|256717979|gb|EEU31536.1| ribosomal protein L1 [Fusobacterium sp. 3_1_36A2]
gi|294488046|gb|EFG35398.1| ribosomal protein L1 [Fusobacterium sp. 3_1_27]
gi|395488470|gb|EJG09331.1| 50S ribosomal protein L1 [Fusobacterium nucleatum subsp. fusiforme
ATCC 51190]
Length = 235
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 63/145 (43%), Gaps = 11/145 (7%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG +S+ I + E + G G + I I++G + F VI P ++
Sbjct: 68 HGTGKSVKILAITSGENIEKALAAGADYAGAEEYINQIQQGWLD---FDLVIATPDMMPK 124
Query: 213 LMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ R+ +L K +P KS T+ D+ + G K + + D G IG++
Sbjct: 125 IGRLGKILGTKGLMPNPKSGTVTPDIAAAVSEFKKG-KLAFRVD----KLGSIHAPIGKV 179
Query: 271 DMSQEQLEDNLKRILADISTMKPPS 295
D +++E+N K + I +KP S
Sbjct: 180 DFDLDKIEENFKAFMDQIIRLKPAS 204
>gi|345891138|ref|ZP_08841995.1| 50S ribosomal protein L1 [Desulfovibrio sp. 6_1_46AFAA]
gi|345048563|gb|EGW52390.1| 50S ribosomal protein L1 [Desulfovibrio sp. 6_1_46AFAA]
Length = 235
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 67/144 (46%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ + FC + E A+ ++ G VG + + ++ G + F + P ++A +
Sbjct: 70 GKTVRVAVFC-KGEKQAEAKEAGADAVGAEELVAKVKEGWLE---FDAAVATPDVMALVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
+I LL R +P K+ ++ D+ L+ G +++ + K G +G++
Sbjct: 126 QIGRLLGPRGLMPNAKTGSVTFDVTKAVTELKAGRVEFKVDKA------GVLHAPLGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
E++ NLK +L ++ +KP +
Sbjct: 180 FGSEKILGNLKALLDTVNRLKPSA 203
>gi|228470281|ref|ZP_04055185.1| ribosomal protein L1 [Porphyromonas uenonis 60-3]
gi|228308024|gb|EEK16899.1| ribosomal protein L1 [Porphyromonas uenonis 60-3]
Length = 234
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 21/156 (13%)
Query: 146 VEVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPT 199
V + H G++ ++A C+ + A + Q+ G VG + I I+ G ++TMP+
Sbjct: 63 VSLPHGI--GKEVRVLALCTPDKEA-EAQEAGADYVGLDEYINKIKSGWTDIDVIITMPS 119
Query: 200 FQFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQD 259
V+ L ++ RGL+ P KS T+ DL K ++ G K D +
Sbjct: 120 ---VMGKIGALGRVLGPRGLM----PNPKSGTVTNDLGAAIKEVKAG-----KIDFKVDK 167
Query: 260 FGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
G +G++ +Q+ +N K + + +KP S
Sbjct: 168 AGIIHTSVGKISFDPKQIRENAKEFIDTVLRLKPSS 203
>gi|254383186|ref|ZP_04998540.1| 50S ribosomal protein L1 [Streptomyces sp. Mg1]
gi|254387431|ref|ZP_05002671.1| 50S ribosomal protein L1 [Streptomyces sp. Mg1]
gi|194342085|gb|EDX23051.1| 50S ribosomal protein L1 [Streptomyces sp. Mg1]
gi|194346216|gb|EDX27182.1| 50S ribosomal protein L1 [Streptomyces sp. Mg1]
Length = 242
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 60/121 (49%), Gaps = 14/121 (11%)
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLI 237
+VGD + I I +G + F V+ P ++ + R+ +L R +P K+ T+ +D+
Sbjct: 93 IVGDDELINEIAKG-NRLNEFDAVVATPDLMGKVGRLGRVLGPRGLMPNPKTGTVTMDVA 151
Query: 238 GIAKRLQTG-IKYSMKKDPQEQDFGYSDFH--IGRLDMSQEQLEDNLKRILADISTMKPP 294
++ G I++ + K +S+ H IG++ S EQL +N L +I +KP
Sbjct: 152 KAVTEIKGGKIEFRVDK--------HSNLHFIIGKVSFSDEQLVENYGAALDEILRLKPS 203
Query: 295 S 295
+
Sbjct: 204 A 204
>gi|91791529|ref|YP_561180.1| 50S ribosomal protein L1 [Shewanella denitrificans OS217]
gi|123061372|sp|Q12SW9.1|RL1_SHEDO RecName: Full=50S ribosomal protein L1
gi|91713531|gb|ABE53457.1| LSU ribosomal protein L1P [Shewanella denitrificans OS217]
Length = 233
Score = 38.1 bits (87), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 21/148 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R + +A +Q A + G LVG + + I+ G + F VI +P D
Sbjct: 67 HGTGRDVRVAVFTQGANAEAAKAAGAELVGMEELAEQIKAGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G+L + +P K+ T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGMLGQILGPRGLMPNPKTGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKP 293
IG++D + EQL++NL+ +++ + KP
Sbjct: 174 TIGKVDFTTEQLKENLEALVSALKKAKP 201
>gi|350552351|ref|ZP_08921554.1| ribosomal protein L1 [Thiorhodospira sibirica ATCC 700588]
gi|349794522|gb|EGZ48336.1| ribosomal protein L1 [Thiorhodospira sibirica ATCC 700588]
Length = 229
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 82/191 (42%), Gaps = 29/191 (15%)
Query: 113 MYNLPRAFIGATVEISTTTHQKKVKYMDPWT--HIVEVEHSFDHGEDRSI-IAFCSQHET 169
+ +LP A +V++S +DP +V +G +S+ +A +Q
Sbjct: 30 LKSLPAAKFAESVDVSVNLG------VDPRKSDQVVRGATVLPNGTGKSVRVAVFAQGAN 83
Query: 170 AAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL------KKR 223
A + G ++G D ++ G + F VI +P D MR+ G L +
Sbjct: 84 AEAAKAAGADIIGMDDLAAQVKAGQLD---FDVVIASP----DAMRVVGQLGQILGPRGL 136
Query: 224 IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLK 282
+P K T+ D+ K ++G ++Y K G IG++ + E L +NL
Sbjct: 137 MPNPKVGTVTPDVATAVKNAKSGQVRYRTDK------AGIIHCTIGKVSFAPEALHENLN 190
Query: 283 RILADISTMKP 293
+LAD++ MKP
Sbjct: 191 ALLADLNKMKP 201
>gi|224370700|ref|YP_002604864.1| 50S ribosomal protein L1 [Desulfobacterium autotrophicum HRM2]
gi|259646154|sp|C0Q9Y2.1|RL1_DESAH RecName: Full=50S ribosomal protein L1
gi|223693417|gb|ACN16700.1| RplA [Desulfobacterium autotrophicum HRM2]
Length = 230
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 65/143 (45%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G++ ++ F ++ E + D G + D +T+ I+ G F I P ++ +
Sbjct: 70 GKEVKVLVF-AKGEKEKEALDAGADFIADEETVAKIKDGWFG---FDKAIATPDMMGTVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
++ +L R +P K+ T+ D+ + L+ G K D + + G +G++
Sbjct: 126 KLGRVLGPRGLMPNAKTGTVTFDVAKAVEELKAG-----KIDFRVEKAGIIHVPVGKVSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
E+L +N+K + I +KP S
Sbjct: 181 GPEKLVENVKAFINMIIALKPAS 203
>gi|317494916|ref|ZP_07953326.1| ribosomal protein L1 [Enterobacteriaceae bacterium 9_2_54FAA]
gi|365834048|ref|ZP_09375498.1| ribosomal protein L1 [Hafnia alvei ATCC 51873]
gi|316917104|gb|EFV38453.1| ribosomal protein L1 [Enterobacteriaceae bacterium 9_2_54FAA]
gi|364570546|gb|EHM48155.1| ribosomal protein L1 [Hafnia alvei ATCC 51873]
Length = 234
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG RS+ +A +Q A + G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGRSVRVAVFTQGANAEAAKAAGAELVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHS 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++D QL++NL+ +L + KP +
Sbjct: 174 TIGKVDFDSNQLKENLEALLVALKKAKPAT 203
>gi|11465492|ref|NP_045117.1| ribosomal protein L1 [Cyanidium caldarium]
gi|14195106|sp|Q9TM00.1|RK1_CYACA RecName: Full=50S ribosomal protein L1, chloroplastic
gi|6466395|gb|AAF12977.1|AF022186_100 unknown [Cyanidium caldarium]
Length = 240
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 64/139 (46%), Gaps = 12/139 (8%)
Query: 158 RSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIR 217
R+ IA + ++++ GV +VG D ++ I G + F ++ P ++ + ++
Sbjct: 73 RTKIAVITNEAEVNKIKNFGVDIVGSKDLVESIANGFLE---FDQLLTTPDMMPVIAKVG 129
Query: 218 GLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQ 274
+L R +P+ KS ++ D+ + + G ++Y K G IG++D +
Sbjct: 130 KILGPRGLMPSPKSGSVTSDIYNAIQEFKKGKLEYRTDKS------GIVHSIIGKIDFTA 183
Query: 275 EQLEDNLKRILADISTMKP 293
E L +NL I I +P
Sbjct: 184 EDLLNNLIAIKKSIDQNRP 202
>gi|15618002|ref|NP_224286.1| 50S ribosomal protein L1 [Chlamydophila pneumoniae CWL029]
gi|15835613|ref|NP_300137.1| 50S ribosomal protein L1 [Chlamydophila pneumoniae J138]
gi|16752966|ref|NP_445239.1| 50S ribosomal protein L1 [Chlamydophila pneumoniae AR39]
gi|33241413|ref|NP_876354.1| 50S ribosomal protein L1 [Chlamydophila pneumoniae TW-183]
gi|6919961|sp|Q9Z9A3.1|RL1_CHLPN RecName: Full=50S ribosomal protein L1
gi|4376336|gb|AAD18231.1| L1 Ribosomal Protein [Chlamydophila pneumoniae CWL029]
gi|7189611|gb|AAF38505.1| ribosomal protein L1 [Chlamydophila pneumoniae AR39]
gi|8978451|dbj|BAA98288.1| L1 ribosomal protein [Chlamydophila pneumoniae J138]
gi|33235921|gb|AAP98011.1| ribosomal protein L1 [Chlamydophila pneumoniae TW-183]
Length = 232
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ I+ F S ++ ++ G +G D ++ I+ G + F + P ++ ++
Sbjct: 70 GKTLRILVFASGNKVKEAVE-AGADFMGSDDLVEKIKSGWLE---FDVAVATPDMMREVG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
++ +L R +PT K+ T+ D+ L+ G K K D G + +G+L
Sbjct: 126 KLGKVLGPRNLMPTPKTGTVTTDVAKAISELRKG-KIEFKADRA----GVCNVGVGKLSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
Q+++N++ + + + KPP+
Sbjct: 181 ESSQIKENIEALSSALIKAKPPA 203
>gi|338999039|ref|ZP_08637694.1| 50S ribosomal protein L1 [Halomonas sp. TD01]
gi|338764060|gb|EGP19037.1| 50S ribosomal protein L1 [Halomonas sp. TD01]
Length = 230
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 89/207 (42%), Gaps = 30/207 (14%)
Query: 105 IRETHHPT-MYNLPRAFIGATVEISTTTHQKKVKY-----MDPWT--HIVEVEHSFDHGE 156
IRE P Y+L A + E+ST ++ + +DP +V +G
Sbjct: 11 IREKVDPNKAYSLEEA-VALLAELSTVKFKESLDVAINLGVDPRKSDQVVRGATVMPNGT 69
Query: 157 DRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMR 215
+ + +A +Q A ++ G +VG D + +++G++ F VI +P D MR
Sbjct: 70 GKDVRVAVFTQGANADAAKEAGADIVGMEDLAEQVKKGVMD---FDVVIASP----DAMR 122
Query: 216 IRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIG 268
+ G L + +P K T+ D+ K + G +++ K+ G +G
Sbjct: 123 VVGQLGQILGPRGLMPNPKVGTVTPDVATAVKNAKAGQVRFRTDKN------GIIHTTLG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPPS 295
+ D + NL+ ++AD+ +KP S
Sbjct: 177 KADFEASAVLGNLEALVADLKRLKPSS 203
>gi|291561993|emb|CBL40804.1| ribosomal protein L1, bacterial/chloroplast [butyrate-producing
bacterium SS3/4]
Length = 231
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIER-GLVTMPTFQFVICNPKILA 211
HG +++ I ++ A + Q G VG D I I+ G + F V+ P ++
Sbjct: 66 HGTGKTVRILVFAKGPKADEAQAAGADFVGAEDLIPKIQNEGWLD---FDVVVATPDMMG 122
Query: 212 DLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHI- 267
+ R+ +L K +P K+ T+ +D+ K ++ G I+Y + K + H+
Sbjct: 123 VVGRLGRVLGPKGLMPNPKAGTVTMDVTKAIKEIKAGKIEYRLDK--------TNIIHVP 174
Query: 268 -GRLDMSQEQLEDNLKRILADISTMKPPS 295
G+ ++EQL DN + ++ I+ KP +
Sbjct: 175 VGKASFTEEQLADNFQTLMDAINKAKPST 203
>gi|393763716|ref|ZP_10352331.1| 50S ribosomal protein L1 [Alishewanella agri BL06]
gi|397171474|ref|ZP_10494878.1| 50S ribosomal protein L1 [Alishewanella aestuarii B11]
gi|392605332|gb|EIW88228.1| 50S ribosomal protein L1 [Alishewanella agri BL06]
gi|396086937|gb|EJI84543.1| 50S ribosomal protein L1 [Alishewanella aestuarii B11]
Length = 233
Score = 37.7 bits (86), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 21/148 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R++ +A +Q A + G +VG D + +++G++ F VI +P D
Sbjct: 67 HGTGRTVRVAVFTQGANAEAAKAAGADIVGMEDLAEQVKKGVMD---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G+L + +P K+ T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGMLGQILGPRGLMPNPKTGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHS 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKP 293
IG+LD ++L++NL+ +L + KP
Sbjct: 174 TIGKLDFDADKLKENLEALLVALKRAKP 201
>gi|345884689|ref|ZP_08836092.1| 50S ribosomal protein L1 [Prevotella sp. C561]
gi|345042477|gb|EGW46574.1| 50S ribosomal protein L1 [Prevotella sp. C561]
Length = 230
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 70/149 (46%), Gaps = 23/149 (15%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTFQFVICNPK 208
G+ ++ C+ + AA ++ G VG + I+ I+ G ++TMP+ C K
Sbjct: 70 GKVTRVLCLCTPDQEAAA-KEAGADHVGLDEYIEKIKGGWTDIDVIITMPS-----CMGK 123
Query: 209 I--LADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFH 266
+ L ++ RGL+ P KS T+ +D+ K ++ G K D + G
Sbjct: 124 LGPLGRVLGPRGLM----PNPKSGTVTMDVAKAVKDVKQG-----KIDFKVDKAGIIHTS 174
Query: 267 IGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++ M+ EQ+ N K ++ + +KP +
Sbjct: 175 IGKVSMTAEQIYGNAKEFISTVIKLKPAA 203
>gi|148284109|ref|YP_001248199.1| 50S ribosomal protein L1 [Orientia tsutsugamushi str. Boryong]
gi|160166288|sp|A5CC96.1|RL1_ORITB RecName: Full=50S ribosomal protein L1
gi|146739548|emb|CAM79277.1| 50S ribosomal protein L1 [Orientia tsutsugamushi str. Boryong]
Length = 248
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 85/188 (45%), Gaps = 16/188 (8%)
Query: 143 THIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQ 201
+ +V + G +++ +A Q E + + G +VG D I+ I+ G + +
Sbjct: 67 SQVVRGVAAMPSGTGKTVKVAVICQEEKLDEFKTTGADIVGSLDIIEAIKSGNID---YD 123
Query: 202 FVICNPKILADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQ 258
I P ++ + ++ +L K +P K T+ D+ + K++++G +++ + K
Sbjct: 124 VYITTPAMMVAVSQVARILGPKGLMPNPKLGTVTNDVAAVVKKVKSGQVEFKVDKA---- 179
Query: 259 DFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSPEKFK 318
G IG++ S +++E N+ +++ I KP ++ I L + P +
Sbjct: 180 --GNIHAGIGKISFSIDEIEANINALVSAIIKSKPSE--AKGTYLNGIYLSTTMGPS-VR 234
Query: 319 LDLSGLIE 326
L++S E
Sbjct: 235 LEISNFTE 242
>gi|386829009|ref|ZP_10116116.1| ribosomal protein L1 [Beggiatoa alba B18LD]
gi|386429893|gb|EIJ43721.1| ribosomal protein L1 [Beggiatoa alba B18LD]
Length = 234
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 21/158 (13%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V HG ++ +A +Q A + G +VG D I+ G + F
Sbjct: 57 QVVRSSTVLPHGTGNTVRVAVFTQGAAADAARAAGADIVGFDDLAARIKEGFMD---FDV 113
Query: 203 VICNPKILADLMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDP 255
VI +P D MRI G L + +P K T+ D+ G K + G ++Y K
Sbjct: 114 VIASP----DAMRIVGQLGQILGPRGLMPNPKVGTVTPDVAGAVKNAKAGQVRYRTDK-- 167
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKP 293
G IG++ L++NL+ +L D++ +KP
Sbjct: 168 ----AGIIHCTIGKVSFDANALKENLQALLNDLNKIKP 201
>gi|384456436|ref|YP_005669034.1| 50S ribosomal protein L1 [Candidatus Arthromitus sp. SFB-mouse-Yit]
gi|346984782|dbj|BAK80458.1| ribosomal protein L1 [Candidatus Arthromitus sp. SFB-mouse-Yit]
Length = 231
Score = 37.7 bits (86), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 14/163 (8%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D I+ F ++ + A + D G VGD + + I+ F ++ P ++ +
Sbjct: 70 GKDIKILVF-AKGDKAKEAVDAGADYVGDHELVNKIQNE--NWFDFDIIVATPDMMGVVG 126
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
RI LL K +P KS T+ D+ ++ G ++Y + K IG+
Sbjct: 127 RIGKLLGPKGLMPNPKSGTVTFDISKTVSEIKAGKVEYRIDKT------AIIHVGIGKKT 180
Query: 272 MSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
S E L +N I++ I KP S +I I + S SP
Sbjct: 181 FSVESLLENFNTIMSAIIKSKPVS--TKGQYIKSISVCSTMSP 221
>gi|383456942|ref|YP_005370931.1| 50S ribosomal protein L1 [Corallococcus coralloides DSM 2259]
gi|380734193|gb|AFE10195.1| 50S ribosomal protein L1 [Corallococcus coralloides DSM 2259]
Length = 237
Score = 37.7 bits (86), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 67/145 (46%), Gaps = 11/145 (7%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG ++ +A ++ E A + + G +VG D K IE G + F VI P ++
Sbjct: 70 HGTGATVRVAVFAKGERATEATNAGADIVGAEDLQKRIEEGFL---DFDTVIATPDMMGI 126
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ R+ +L R +P K T+ +D +AK ++ K D + + G +G+
Sbjct: 127 VGRLGKVLGPRGLMPNPKVGTVTMD---VAKAIRD--SKGGKVDFRAEKAGIVHAKMGKA 181
Query: 271 DMSQEQLEDNLKRILADISTMKPPS 295
+ ++LE N ++ + +KP +
Sbjct: 182 SFAADKLEANFNALVDLVMKLKPAT 206
>gi|357012827|ref|ZP_09077826.1| RplA [Paenibacillus elgii B69]
Length = 230
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 20/123 (16%)
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVIC--NPKILADLMRIRGLL--KKRIPTLKSQTLGVD 235
VGD D I I++G F F +C P +++++ ++ +L K +P K+ T+ D
Sbjct: 94 FVGDQDMINKIQQGW-----FDFDVCVATPDMMSEVGKLGRILGGKGLMPNPKAGTVTFD 148
Query: 236 LIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH--IGRLDMSQEQLEDNLKRILADISTMK 292
+ + ++ G I+Y + K Q H IG++ E+L +N K ++ ++ K
Sbjct: 149 VAKAVQEIKAGKIEYRLDKAGQ--------IHAPIGKVSFDAEKLAENFKALIDALNRAK 200
Query: 293 PPS 295
P +
Sbjct: 201 PAA 203
>gi|444920965|ref|ZP_21240804.1| 50S ribosomal protein L1 [Wohlfahrtiimonas chitiniclastica SH04]
gi|444508185|gb|ELV08358.1| 50S ribosomal protein L1 [Wohlfahrtiimonas chitiniclastica SH04]
Length = 230
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 17/103 (16%)
Query: 200 FQFVICNPKILADLMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMK 252
F VI +P D MRI G L + +P K T+ D+ G ++G +++
Sbjct: 112 FDVVIASP----DAMRIVGQLGQVLGPRGLMPNPKVGTVTPDVAGAVNNAKSGQVRFRTD 167
Query: 253 KDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
K+ G IG++D +L++NLK ++ +++ +KP S
Sbjct: 168 KN------GIIHCSIGKVDFDAAKLQENLKALITEVNRLKPSS 204
>gi|392958557|ref|ZP_10324066.1| 50S ribosomal protein L1 [Bacillus macauensis ZFHKF-1]
gi|391875458|gb|EIT84069.1| 50S ribosomal protein L1 [Bacillus macauensis ZFHKF-1]
Length = 233
Score = 37.7 bits (86), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 12/119 (10%)
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL--KKRIPTLKSQTLGVDLI 237
VGD+D I I++G F ++ P ++A++ R+ +L K +P K+ T+ ++
Sbjct: 94 FVGDTDYINKIQQGWFD---FDVIVATPDMMAEVGRLGRVLGPKGLMPNPKTGTVTFEVE 150
Query: 238 GIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
++ G ++Y + K G IG++ E+L +NL I+ + +KP +
Sbjct: 151 KAVNDIKAGKVEYRVDKA------GNVHVPIGKVSFENEKLAENLSTIIETLLKVKPSA 203
>gi|375110320|ref|ZP_09756545.1| 50S ribosomal protein L1 [Alishewanella jeotgali KCTC 22429]
gi|374569562|gb|EHR40720.1| 50S ribosomal protein L1 [Alishewanella jeotgali KCTC 22429]
Length = 233
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 21/148 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R++ +A +Q A + G +VG D + +++G++ F VI +P D
Sbjct: 67 HGTGRTVRVAVFTQGANAEAAKAAGADIVGMEDLAEQVKKGVMD---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G+L + +P K+ T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGMLGQILGPRGLMPNPKTGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHS 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKP 293
IG+LD ++L++NL+ +L + KP
Sbjct: 174 TIGKLDFDADKLKENLEALLVALKRAKP 201
>gi|339626603|ref|YP_004718246.1| 50S ribosomal protein L1 [Sulfobacillus acidophilus TPY]
gi|379006055|ref|YP_005255506.1| 50S ribosomal protein L1 [Sulfobacillus acidophilus DSM 10332]
gi|339284392|gb|AEJ38503.1| ribosomal protein L1 [Sulfobacillus acidophilus TPY]
gi|361052317|gb|AEW03834.1| LSU ribosomal protein L1P [Sulfobacillus acidophilus DSM 10332]
Length = 236
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 70/147 (47%), Gaps = 15/147 (10%)
Query: 154 HGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILA 211
HG R+ ++ F ++ + A + ++ G VG D + I++G + F + P ++A
Sbjct: 67 HGTGRTQRVLVF-AKGDKAKEAEEAGADFVGADDLAEKIQQGWLD---FDVAVATPDMMA 122
Query: 212 DLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIG 268
+ R+ +L R +P K+ T+ D+ + ++ G I++ +K G IG
Sbjct: 123 MVGRLGKILGPRGLMPNPKTGTVTFDVKNAIREIKAGKIEFRTEKA------GIVHAPIG 176
Query: 269 RLDMSQEQLEDNLKRILADISTMKPPS 295
++ + EQL +N ++ + KP +
Sbjct: 177 KVSFTAEQLAENFATLMDALIKAKPAA 203
>gi|313204189|ref|YP_004042846.1| 50S ribosomal protein L1 [Paludibacter propionicigenes WB4]
gi|312443505|gb|ADQ79861.1| LSU ribosomal protein L1P [Paludibacter propionicigenes WB4]
Length = 231
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 67/143 (46%), Gaps = 11/143 (7%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ ++A C+ + AA ++ G VG + I+ I+ G + +I P I+ L
Sbjct: 70 GKQVKVLALCTPDQEAAA-KEAGADFVGLDEYIEKIKGGWTDV---DVIITQPAIMGKLG 125
Query: 215 RIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDM 272
+ +L R +P KS T+ ++ K ++ G K D + +G +G++
Sbjct: 126 ALGRVLGPRGLMPNPKSGTVTNEVGKAVKEVKQG-----KIDFKVDKYGIVHTSVGKVSF 180
Query: 273 SQEQLEDNLKRILADISTMKPPS 295
+ EQ+ +N K ++ + +KP +
Sbjct: 181 TAEQIVENAKEFVSTLMKLKPTA 203
>gi|167856512|ref|ZP_02479224.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755]
gi|167852359|gb|EDS23661.1| 50S ribosomal protein L1 [Haemophilus parasuis 29755]
Length = 229
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 21/148 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG R+ +A +Q A + G LVG D + +++G + F VI +P D
Sbjct: 67 HGTGRTARVAVFTQGANAEAAKAAGADLVGMEDLAEQVKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K ++G I+Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKSGQIRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKP 293
IG+ D S +QL++NL+ +LA + KP
Sbjct: 174 TIGKADFSPDQLKENLQALLAALVKAKP 201
>gi|342733068|ref|YP_004771907.1| 50S ribosomal protein L1 [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|417960191|ref|ZP_12602828.1| 50S ribosomal protein L1 [Candidatus Arthromitus sp. SFB-1]
gi|417965647|ref|ZP_12607142.1| 50S ribosomal protein L1 [Candidatus Arthromitus sp. SFB-4]
gi|417968873|ref|ZP_12609848.1| 50S ribosomal protein L1 [Candidatus Arthromitus sp. SFB-co]
gi|418015525|ref|ZP_12655090.1| 50S ribosomal protein L1 [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|418373323|ref|ZP_12965413.1| 50S ribosomal protein L1 [Candidatus Arthromitus sp. SFB-mouse-SU]
gi|342330523|dbj|BAK57165.1| 50S ribosomal protein L1 [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|345505860|gb|EGX28154.1| 50S ribosomal protein L1 [Candidatus Arthromitus sp. SFB-mouse-NYU]
gi|380331542|gb|EIA22571.1| 50S ribosomal protein L1 [Candidatus Arthromitus sp. SFB-1]
gi|380336119|gb|EIA26177.1| 50S ribosomal protein L1 [Candidatus Arthromitus sp. SFB-4]
gi|380338832|gb|EIA27677.1| 50S ribosomal protein L1 [Candidatus Arthromitus sp. SFB-co]
gi|380341294|gb|EIA29782.1| 50S ribosomal protein L1 [Candidatus Arthromitus sp. SFB-mouse-SU]
Length = 228
Score = 37.7 bits (86), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 70/163 (42%), Gaps = 14/163 (8%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+D I+ F ++ + A + D G VGD + + I+ F ++ P ++ +
Sbjct: 67 GKDIKILVF-AKGDKAKEAVDAGADYVGDHELVNKIQNE--NWFDFDIIVATPDMMGVVG 123
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
RI LL K +P KS T+ D+ ++ G ++Y + K IG+
Sbjct: 124 RIGKLLGPKGLMPNPKSGTVTFDISKTVSEIKAGKVEYRIDKT------AIIHVGIGKKT 177
Query: 272 MSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
S E L +N I++ I KP S +I I + S SP
Sbjct: 178 FSVESLLENFNTIMSAIIKSKPVS--TKGQYIKSISVCSTMSP 218
>gi|417889304|ref|ZP_12533395.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21195]
gi|341851714|gb|EGS92625.1| ribosomal protein L1 [Staphylococcus aureus subsp. aureus 21195]
Length = 230
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ +S++ F + + A+ + G VG+++ ++ I++G F V+ P ++ ++
Sbjct: 70 GKSQSVLVFA-KGDKIAEAEAAGADYVGEAEYVQKIQQGWFD---FDVVVAIPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEKA------GIVHASIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
+ EQL +N + ++ KP S
Sbjct: 180 FTDEQLIENFNTLQDVLAKAKPSS 203
>gi|297172926|gb|ADI23887.1| hypothetical protein [uncultured gamma proteobacterium
HF4000_48J03]
Length = 229
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 23/167 (13%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ +I F +Q E ++ G VG D + I+ G F VI P D M
Sbjct: 70 GKTLRVIVF-AQSEQVDAAKNAGADKVGFEDLAEEIKSGF---SEFDVVIATP----DTM 121
Query: 215 RIRGLLKK------RIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHI 267
RI G L K +P K T+ ++ + +TG I++ K G I
Sbjct: 122 RIVGQLGKILGPKGMMPNPKDGTVTKNVEDAVIKAKTGQIRFRNDKG------GVVHCPI 175
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
G++D S+E +++NL+ +L I KP S FI ++ + S P
Sbjct: 176 GKIDFSEESIKENLESLLDAIMKSKPSSAK--GAFIKKVTVSSTMGP 220
>gi|307543815|ref|YP_003896294.1| 50S ribosomal protein L1 [Halomonas elongata DSM 2581]
gi|307215839|emb|CBV41109.1| 50S ribosomal protein L1 [Halomonas elongata DSM 2581]
Length = 230
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 20/142 (14%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A +Q A ++ G +VG D + +++G + F VI +P D MR+ G L
Sbjct: 75 VAVFTQGANADAAKEAGADIVGMDDLAEQVKKGQLD---FDVVIASP----DAMRVVGQL 127
Query: 221 ------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+ +P K T+ D+ K + G +++ K+ G +G++D
Sbjct: 128 GQILGPRGLMPNPKVGTVTPDVATAVKNAKAGQVRFRTDKN------GIIHTTLGKVDFD 181
Query: 274 QEQLEDNLKRILADISTMKPPS 295
++ NL+ ++AD+ +KP +
Sbjct: 182 AAAIQGNLEALIADLKKLKPST 203
>gi|156935819|ref|YP_001439734.1| 50S ribosomal protein L1 [Cronobacter sakazakii ATCC BAA-894]
gi|389842633|ref|YP_006344717.1| 50S ribosomal protein L1 [Cronobacter sakazakii ES15]
gi|417791333|ref|ZP_12438797.1| 50S ribosomal protein L1 [Cronobacter sakazakii E899]
gi|429107121|ref|ZP_19168990.1| LSU ribosomal protein L1p (L10Ae) [Cronobacter malonaticus 681]
gi|429112558|ref|ZP_19174328.1| LSU ribosomal protein L1p (L10Ae) [Cronobacter malonaticus 507]
gi|429117826|ref|ZP_19178744.1| LSU ribosomal protein L1p (L10Ae) [Cronobacter sakazakii 701]
gi|429120818|ref|ZP_19181478.1| LSU ribosomal protein L1p (L10Ae) [Cronobacter sakazakii 680]
gi|449309928|ref|YP_007442284.1| 50S ribosomal protein L1 [Cronobacter sakazakii SP291]
gi|166219572|sp|A7MQP8.1|RL1_ENTS8 RecName: Full=50S ribosomal protein L1
gi|156534073|gb|ABU78899.1| hypothetical protein ESA_03695 [Cronobacter sakazakii ATCC BAA-894]
gi|333954582|gb|EGL72420.1| 50S ribosomal protein L1 [Cronobacter sakazakii E899]
gi|387853109|gb|AFK01207.1| 50S ribosomal protein L1 [Cronobacter sakazakii ES15]
gi|426293844|emb|CCJ95103.1| LSU ribosomal protein L1p (L10Ae) [Cronobacter malonaticus 681]
gi|426313715|emb|CCK00441.1| LSU ribosomal protein L1p (L10Ae) [Cronobacter malonaticus 507]
gi|426320955|emb|CCK04857.1| LSU ribosomal protein L1p (L10Ae) [Cronobacter sakazakii 701]
gi|426324680|emb|CCK12215.1| LSU ribosomal protein L1p (L10Ae) [Cronobacter sakazakii 680]
gi|449099961|gb|AGE87995.1| 50S ribosomal protein L1 [Cronobacter sakazakii SP291]
Length = 234
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG RS+ +A +Q A + G LVG D + I++G + F VI +P D
Sbjct: 67 HGTGRSVRVAVFTQGPNAEAAKAAGAELVGMEDLAEQIKKGEMN---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGQVLGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++D ++L++NL+ +L + KP S
Sbjct: 174 TIGKVDFDADKLKENLEALLVALKKAKPSS 203
>gi|86138061|ref|ZP_01056636.1| hypothetical protein MED193_01000 [Roseobacter sp. MED193]
gi|85825088|gb|EAQ45288.1| hypothetical protein MED193_01000 [Roseobacter sp. MED193]
Length = 1305
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 52/105 (49%), Gaps = 19/105 (18%)
Query: 255 PQEQDFGYSDFH--IGRLD--MSQEQLEDNLKRILADISTMKPPSKPED---EDFITRIL 307
P E+D +D +G LD +EQ ED + ILAD+ + P +PED ED + IL
Sbjct: 396 PTEEDSEEADLSDILGALDEGAQEEQSEDQVDDILADVLSAA-PGEPEDAPEEDPLADIL 454
Query: 308 ----LWSEPSPEKFKLDLSGLIEKPKAKELDTGEEIDDEPKEMAA 348
+ EP + +DL GL+ EL TGE+ D P AA
Sbjct: 455 GGLDVEEEPGAVEESVDLQGLL-----GELSTGEQ--DSPDSSAA 492
>gi|242372756|ref|ZP_04818330.1| 50S ribosomal protein L1 [Staphylococcus epidermidis M23864:W1]
gi|242349529|gb|EES41130.1| 50S ribosomal protein L1 [Staphylococcus epidermidis M23864:W1]
Length = 231
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 30/144 (20%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ + ++ F + + + ++ G VG++D ++ I++G F V+ P ++ ++
Sbjct: 70 GKSQRVLVFA-KGDKITEAEEAGADYVGEADYVQKIQQGWFD---FDVVVATPDMMGEVG 125
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLD 271
++ +L K +P K+ T+ +D+ + ++ G ++Y +K G IG++
Sbjct: 126 KLGRVLGPKGLMPNPKTGTVTMDVKKAVEEIKAGKVEYRAEK------AGIVHASIGKVS 179
Query: 272 MSQEQLEDNLKRILADISTMKPPS 295
E+L +N K + ++ KP S
Sbjct: 180 FDDEKLVENFKALQDVLAKAKPSS 203
>gi|197286617|ref|YP_002152489.1| 50S ribosomal protein L1 [Proteus mirabilis HI4320]
gi|227355190|ref|ZP_03839599.1| 50S ribosomal protein L1 [Proteus mirabilis ATCC 29906]
gi|425069647|ref|ZP_18472762.1| 50S ribosomal protein L1 [Proteus mirabilis WGLW6]
gi|425071100|ref|ZP_18474206.1| 50S ribosomal protein L1 [Proteus mirabilis WGLW4]
gi|226724954|sp|B4EYV2.1|RL1_PROMH RecName: Full=50S ribosomal protein L1
gi|194684104|emb|CAR45502.1| 50S ribosomal protein L1 [Proteus mirabilis HI4320]
gi|227164699|gb|EEI49553.1| 50S ribosomal protein L1 [Proteus mirabilis ATCC 29906]
gi|404596799|gb|EKA97317.1| 50S ribosomal protein L1 [Proteus mirabilis WGLW6]
gi|404599925|gb|EKB00378.1| 50S ribosomal protein L1 [Proteus mirabilis WGLW4]
Length = 233
Score = 37.7 bits (86), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 69/150 (46%), Gaps = 21/150 (14%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG RS+ +A +Q A ++ G LVG D ++ G + F VI +P D
Sbjct: 67 HGTGRSVRVAVFAQGANAEAAKEAGAELVGMDDLAAKVKAGEMD---FDVVIASP----D 119
Query: 213 LMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
MR+ G L + +P K T+ ++ K + G ++Y K+ G
Sbjct: 120 AMRVVGQLGQILGPRGLMPNPKVGTVTPNVAEAVKNAKAGQVRYRNDKN------GIIHT 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
IG++D ++ QL++NL+ +L + KP S
Sbjct: 174 TIGKVDFNEAQLKENLEALLVALKKAKPSS 203
>gi|255322047|ref|ZP_05363195.1| ribosomal protein L1 [Campylobacter showae RM3277]
gi|255300860|gb|EET80129.1| ribosomal protein L1 [Campylobacter showae RM3277]
Length = 234
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 61/118 (51%), Gaps = 10/118 (8%)
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL--KKRIPTLKSQTLGVDLI 237
+VG + ++ I++G++ F +I P ++ + ++ +L K +P K+ T+ +D+
Sbjct: 95 IVGSDELVEDIQKGIMN---FDVLIATPNLMGLVGKVGRILGPKGLMPNPKTGTVTMDVA 151
Query: 238 GIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
++G + + + D Q G +G++ S+EQL DN+ ++ ++ KP +
Sbjct: 152 QAVNNAKSG-QVNFRVDKQ----GNIHAGLGKVSFSKEQLNDNISTLIKAVNRQKPAA 204
>gi|399025250|ref|ZP_10727262.1| ribosomal protein L1 [Chryseobacterium sp. CF314]
gi|398078609|gb|EJL69503.1| ribosomal protein L1 [Chryseobacterium sp. CF314]
Length = 230
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 52/234 (22%), Positives = 101/234 (43%), Gaps = 31/234 (13%)
Query: 87 LQKDYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKVKYMDPWTHIV 146
L K K RI+ +E A ++E + A A+V+I+ K +V
Sbjct: 12 LSKVEKGRIYNLEEGSALVKEVNT--------AKFDASVDIAVRLGVDPRKANQMVRGVV 63
Query: 147 EVEHSFDHGEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERG------LVTMPTF 200
+ H G+D ++A + + A+ ++ G VG + ++ I+ G +VTMP
Sbjct: 64 SLPHG--TGKDVKVLALVTP-DKEAEAKEAGADYVGLDEYLQKIKDGWTDVDVIVTMPA- 119
Query: 201 QFVICNPKILADLMRIRGLLKKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDF 260
V+ L ++ RGL+ P KS T+ +++ +++G K D + +
Sbjct: 120 --VMGKLGPLGRVLGPRGLM----PNPKSGTVTMEIGKAVTEVKSG-----KIDFKVDKY 168
Query: 261 GYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
G IG++ +++ +N + ++ + MKP + ++ I L S SP
Sbjct: 169 GIIHAGIGKVSFDADKIRENAQELIQTLIKMKPTA--AKGTYVKSIYLSSTMSP 220
>gi|224137412|ref|XP_002322551.1| predicted protein [Populus trichocarpa]
gi|222867181|gb|EEF04312.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 37.7 bits (86), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 63/132 (47%), Gaps = 23/132 (17%)
Query: 34 AARKGTRARKEGKKVRTEIKKVAWT-----PDSKKKKD--IYASRKVDESNLTYPEDDIY 86
+AR+ A+++ K++ E+++VA ++ + KD + + K+DES Y E +I
Sbjct: 87 SARELLEAQEKMKELEIELERVAAALKHSESENAQMKDEVLLVNEKLDESGKKYEELEIS 146
Query: 87 LQK----------DYKLRIFQFQEALAAIRETHHPTMYNLPRAFIGATVEISTTTHQKKV 136
+K Y ++ QEAL A +ET H + + +F G T+E+ +
Sbjct: 147 HKKVKEQIIEAEEKYSAQLNSLQEALQA-QETKHKELVEVKESFDGITLELENSR----- 200
Query: 137 KYMDPWTHIVEV 148
K M H +EV
Sbjct: 201 KKMKELEHELEV 212
>gi|449016945|dbj|BAM80347.1| mitochondrial ribosomal protein L1 precursor [Cyanidioschyzon
merolae strain 10D]
Length = 270
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/136 (19%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 160 IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGL 219
+ F + A + + G ALVG ++ + I+ +T F+ + P+ L+ + R+
Sbjct: 113 VAVFTTLPSEAEEARAHGAALVGAAELVSHIQTNGIT---FERCLATPEALSYVARVARQ 169
Query: 220 LKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQL 277
L R +P+ K T+GV++ + + +++ + +G +G++ E++
Sbjct: 170 LGPRGLVPSEKLGTVGVEIGDLVDMALSSVQF------RTDAYGQVHVPVGKVSFGPERI 223
Query: 278 EDNLKRILADISTMKP 293
+DN+ ++ + +KP
Sbjct: 224 QDNVMAVVQHLLRVKP 239
>gi|378824505|ref|YP_005089675.1| rpl1 gene product (chloroplast) [Synedra acus]
gi|371572704|gb|AEX37800.1| ribosomal protein L1 (chloroplast) [Synedra acus]
Length = 230
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
IA + E ++ + G ++G+ I+ I +G + F +I P ++ L ++ +L
Sbjct: 75 IAVLTNDENFSEAELAGADIIGNDSLIEQITKGNIQ---FDLLIATPNMMPKLAKLGRVL 131
Query: 221 --KKRIPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLE 278
K +P+ KS T+ + + G K+ K D G + G+++ + +QL
Sbjct: 132 GPKGLMPSPKSGTVTNTITETLTEFKKG-KFEYKADKT----GIVHVNFGKINFTDQQLV 186
Query: 279 DNLKRILADISTMKP 293
+NL + A I +P
Sbjct: 187 ENLSELYASILQNRP 201
>gi|311112015|ref|YP_003983237.1| 50S ribosomal protein L1 [Rothia dentocariosa ATCC 17931]
gi|310943509|gb|ADP39803.1| 50S ribosomal protein L1 [Rothia dentocariosa ATCC 17931]
Length = 234
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 12/119 (10%)
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLLKKR--IPTLKSQTLGVDLI 237
VG + I I G F + P ++ + R+ +L R +P K+ T+ +D+
Sbjct: 94 FVGSDELIAKIAGGWTD---FDAAVATPDMMGKVGRLGKVLGPRNLMPNPKTGTVTMDVA 150
Query: 238 GIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
++ G I + + ++ F IG+ S EQLE+N L +I+ +KP S
Sbjct: 151 KAVADIKGGKIDFRVDRNSNLH------FIIGKASFSAEQLEENFNTALEEINRLKPSS 203
>gi|372273423|ref|ZP_09509471.1| 50S ribosomal protein L1 [Marinobacterium stanieri S30]
Length = 231
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 70/160 (43%), Gaps = 21/160 (13%)
Query: 144 HIVEVEHSFDHGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQF 202
+V +G + + +A +Q + A + + G +VG D + ++ G + F
Sbjct: 57 QVVRGSTVLPNGTGKDVRVAVFAQGDNAEKAKAAGADVVGFEDLAEQVKAGNLD---FDV 113
Query: 203 VICNPKILADLMRIRGLL------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDP 255
VI P D MR+ G L + +P K T+ D+ + G +++ K+
Sbjct: 114 VIATP----DAMRVVGQLGQILGPRGLMPNPKVGTVTPDVTTAVNNAKAGQVRFRTDKN- 168
Query: 256 QEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPS 295
G +G+L + +++NL+ +LAD+ +KP S
Sbjct: 169 -----GIVHCSVGKLGFEGKAIQENLEALLADLKKLKPAS 203
>gi|366053936|ref|ZP_09451658.1| 50S ribosomal protein L1 [Lactobacillus suebicus KCTC 3549]
Length = 230
Score = 37.7 bits (86), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 68/146 (46%), Gaps = 17/146 (11%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+++++I F ++ + A Q G +VGD D + I+ G + F I P ++A +
Sbjct: 71 GKEQTVIVF-AKGDKAKDAQAAGADVVGDDDLVARIQDGWL---DFDVAIATPDMMAQVG 126
Query: 215 RIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHI--GR 269
R+ +L K +P K+ T+ +D+ + G + Y +D + H+ G+
Sbjct: 127 RLGRVLGPKGLMPNPKTGTVTMDVTKAVNESKAGKVTYRTDRD--------GNVHVPAGK 178
Query: 270 LDMSQEQLEDNLKRILADISTMKPPS 295
+ +L +N+ I ++ +P S
Sbjct: 179 VSFDDNKLVENITTIEDIVAKARPAS 204
>gi|338534258|ref|YP_004667592.1| 50S ribosomal protein L1 [Myxococcus fulvus HW-1]
gi|337260354|gb|AEI66514.1| 50S ribosomal protein L1 [Myxococcus fulvus HW-1]
Length = 237
Score = 37.7 bits (86), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 64/145 (44%), Gaps = 11/145 (7%)
Query: 154 HGEDRSI-IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILAD 212
HG ++ +A ++ E A + G +VG D K IE G + F VI P ++
Sbjct: 70 HGTGATVRVAVFAKGEKATDATNAGADVVGAEDLQKRIEEGFL---DFDTVIATPDMMGV 126
Query: 213 LMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTGIKYSMKKDPQEQDFGYSDFHIGRL 270
+ R+ +L R +P K T+ +D+ + + G K D + + G +G+
Sbjct: 127 VGRLGKVLGPRGLMPNPKVGTVTMDVAKAIRDAKGG-----KVDFRAEKAGIVHAKLGKC 181
Query: 271 DMSQEQLEDNLKRILADISTMKPPS 295
E+LE N ++ + +KP +
Sbjct: 182 SFEVEKLEANFNALVDLVMKLKPAA 206
>gi|337751737|ref|YP_004645899.1| protein RplA [Paenibacillus mucilaginosus KNP414]
gi|379724681|ref|YP_005316812.1| protein RplA [Paenibacillus mucilaginosus 3016]
gi|386727433|ref|YP_006193759.1| protein RplA [Paenibacillus mucilaginosus K02]
gi|336302926|gb|AEI46029.1| RplA [Paenibacillus mucilaginosus KNP414]
gi|378573353|gb|AFC33663.1| RplA [Paenibacillus mucilaginosus 3016]
gi|384094558|gb|AFH65994.1| protein RplA [Paenibacillus mucilaginosus K02]
Length = 230
Score = 37.7 bits (86), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 20/123 (16%)
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVIC--NPKILADLMRIRGLL--KKRIPTLKSQTLGVD 235
VGD D I I++G F F +C P +++++ ++ +L K +P K+ T+ D
Sbjct: 94 FVGDQDMINKIQQGW-----FDFDVCVATPDMMSEVGKLGRILGGKGLMPNPKAGTVTFD 148
Query: 236 LIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFH--IGRLDMSQEQLEDNLKRILADISTMK 292
+ + ++ G I+Y + K Q H IG++ E+L +N K ++ ++ K
Sbjct: 149 VTKAVQEIKAGKIEYRLDKAGQ--------IHAPIGKVSFDAEKLAENFKALIDALNRAK 200
Query: 293 PPS 295
P +
Sbjct: 201 PAA 203
>gi|352105713|ref|ZP_08960920.1| 50S ribosomal protein L1 [Halomonas sp. HAL1]
gi|359394388|ref|ZP_09187441.1| 50S ribosomal protein L1 [Halomonas boliviensis LC1]
gi|350598290|gb|EHA14412.1| 50S ribosomal protein L1 [Halomonas sp. HAL1]
gi|357971635|gb|EHJ94080.1| 50S ribosomal protein L1 [Halomonas boliviensis LC1]
Length = 230
Score = 37.7 bits (86), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 65/142 (45%), Gaps = 20/142 (14%)
Query: 161 IAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL 220
+A +Q A ++ G +VG D + +++G++ F VI +P D MR+ G L
Sbjct: 75 VAVFTQGANADAAKEAGADIVGMDDLAEQVKKGVMD---FDVVIASP----DAMRVVGQL 127
Query: 221 ------KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMS 273
+ +P K T+ D+ K + G +++ K+ G +G++D
Sbjct: 128 GQILGPRGLMPNPKVGTVTPDVATAVKNAKAGQVRFRTDKN------GIIHTTLGKVDFD 181
Query: 274 QEQLEDNLKRILADISTMKPPS 295
+ NL+ ++AD+ +KP +
Sbjct: 182 VAAINGNLEALVADLKRLKPSA 203
>gi|425746166|ref|ZP_18864198.1| ribosomal protein L1 [Acinetobacter baumannii WC-323]
gi|425486815|gb|EKU53180.1| ribosomal protein L1 [Acinetobacter baumannii WC-323]
Length = 231
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 64/142 (45%), Gaps = 22/142 (15%)
Query: 180 LVGDSDTIKGIERGLVTMPTFQFVICNPKILADLMRIRGLL------KKRIPTLKSQTLG 233
+VG D + I+ G + F VI P D MR+ G L + +P K T+
Sbjct: 94 IVGFDDLAESIQGGNLD---FDVVIAAP----DAMRVVGKLGTILGPRGLMPNPKVGTVT 146
Query: 234 VDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMK 292
D+ G K ++G +Y + K G IG+L S+E + N++ ++AD+ +K
Sbjct: 147 PDVAGAVKNAKSGQARYRVDK------AGIIHAAIGQLGFSEEAVRQNVETLIADLKKLK 200
Query: 293 PPSKPEDEDFITRILLWSEPSP 314
P + ++ +I L S P
Sbjct: 201 PAT--SKGVYVKKITLSSTMGP 220
>gi|433451437|ref|ZP_20412789.1| ribosomal protein L1 [Mycoplasma sp. G5847]
gi|431933688|gb|ELK20251.1| ribosomal protein L1 [Mycoplasma sp. G5847]
Length = 226
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Query: 200 FQFVICNPKILADLMRIRGLL--KKRIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQ 256
F ++ P+++A L I +L K +P K+ T+ +D+ ++ G ++Y K+
Sbjct: 111 FDIIVATPEMMAKLGAIGKILGPKGLMPNPKTGTVTMDVAKAIDDIKKGKVEYRADKE-- 168
Query: 257 EQDFGYSDFHIGRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
G IG++ E+LE+N K ++ +I +KP + D+I + L + P
Sbjct: 169 ----GNVHLIIGKVSFEAERLEENFKAVIDEIRRVKPQT--VKGDYIKNVTLSTTMGP 220
>gi|396585140|ref|ZP_10485569.1| ribosomal protein L1 [Actinomyces sp. ICM47]
gi|395547119|gb|EJG14621.1| ribosomal protein L1 [Actinomyces sp. ICM47]
Length = 235
Score = 37.4 bits (85), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 151 SFDHGEDRS--IIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPK 208
S HG ++ ++ F A + D G VG + I+ + +G F + P
Sbjct: 64 SLPHGTGKTARVLVFAVGPR-AQEAIDAGADEVGGDELIEKVAKGYTD---FDVAVATPD 119
Query: 209 ILADLMRIRGLLKKR--IPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDF 265
++ + R+ +L R +P K+ T+ +D+ K ++ G I++ + K F
Sbjct: 120 LMGKVGRLGRVLGPRGLMPNPKTGTVTMDVAKAIKEIKGGRIEFRVDKHANLA------F 173
Query: 266 HIGRLDMSQEQLEDNLKRILADISTMKPPS 295
+G+ + EQL +N +L ++ +KP S
Sbjct: 174 IVGKASFTAEQLTENYAAVLDEVLRLKPTS 203
>gi|297183427|gb|ADI19560.1| hypothetical protein [uncultured gamma proteobacterium
HF0770_27E13]
Length = 229
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 72/167 (43%), Gaps = 23/167 (13%)
Query: 155 GEDRSIIAFCSQHETAAQLQDMGVALVGDSDTIKGIERGLVTMPTFQFVICNPKILADLM 214
G+ +I F +Q E ++ G VG D + I+ G F VI P D M
Sbjct: 70 GKTLRVIVF-AQSEQVDAAKNAGADKVGFEDLAEEIKSGF---SEFDVVIATP----DTM 121
Query: 215 RIRGLLKK------RIPTLKSQTLGVDLIGIAKRLQTG-IKYSMKKDPQEQDFGYSDFHI 267
RI G L K +P K T+ ++ + +TG I++ K G I
Sbjct: 122 RIVGQLGKILGPKGMMPNPKDGTVTKNVEDAVIKAKTGQIRFRNDKG------GVVHCPI 175
Query: 268 GRLDMSQEQLEDNLKRILADISTMKPPSKPEDEDFITRILLWSEPSP 314
G++D S+E +++NL+ +L I KP S FI ++ + S P
Sbjct: 176 GKIDFSEESIKENLESLLDAIMKSKPSSAK--GAFIKKVTVSSTMGP 220
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.134 0.381
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,361,833,281
Number of Sequences: 23463169
Number of extensions: 223245746
Number of successful extensions: 574305
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 1161
Number of HSP's that attempted gapping in prelim test: 573865
Number of HSP's gapped (non-prelim): 1303
length of query: 351
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 208
effective length of database: 9,003,962,200
effective search space: 1872824137600
effective search space used: 1872824137600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)