Query psy16352
Match_columns 905
No_of_seqs 439 out of 594
Neff 6.0
Searched_HMMs 46136
Date Fri Aug 16 19:10:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16352.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/16352hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3705|consensus 100.0 1E-127 2E-132 1027.3 25.7 455 48-799 116-576 (580)
2 KOG3705|consensus 100.0 3.8E-75 8.3E-80 623.4 13.1 403 356-871 165-577 (580)
3 KOG4225|consensus 100.0 3.2E-33 7E-38 305.2 7.7 179 669-860 244-489 (489)
4 PF05830 NodZ: Nodulation prot 99.9 7.8E-25 1.7E-29 233.6 11.3 261 405-673 3-295 (321)
5 KOG4348|consensus 99.9 1.2E-23 2.5E-28 229.0 -0.5 123 739-865 4-160 (627)
6 KOG4348|consensus 99.9 5.9E-23 1.3E-27 223.6 3.7 175 683-861 28-319 (627)
7 KOG1029|consensus 99.7 1.9E-18 4.1E-23 198.6 5.2 168 684-863 933-1111(1118)
8 KOG4226|consensus 99.6 4.7E-15 1E-19 154.6 7.5 161 726-893 101-287 (379)
9 KOG4225|consensus 99.6 5.2E-15 1.1E-19 163.2 7.8 129 733-863 227-364 (489)
10 KOG1029|consensus 99.5 1.9E-14 4E-19 166.2 6.2 117 740-861 697-868 (1118)
11 KOG4226|consensus 99.5 5.1E-14 1.1E-18 147.0 6.7 120 740-863 8-165 (379)
12 PF14604 SH3_9: Variant SH3 do 99.4 2.3E-13 5E-18 110.4 3.6 49 808-858 1-49 (49)
13 PF05830 NodZ: Nodulation prot 99.2 3.4E-11 7.5E-16 129.8 11.4 194 149-358 3-233 (321)
14 PF03254 XG_FTase: Xyloglucan 99.2 2.7E-09 5.8E-14 122.3 23.3 151 522-677 270-440 (476)
15 PF14604 SH3_9: Variant SH3 do 99.1 8.6E-11 1.9E-15 95.4 4.3 49 741-791 1-49 (49)
16 PF00018 SH3_1: SH3 domain; I 99.1 7.3E-11 1.6E-15 95.1 3.6 48 807-854 1-48 (48)
17 PF07653 SH3_2: Variant SH3 do 99.0 1.6E-10 3.4E-15 95.8 3.0 53 806-860 2-55 (55)
18 PF10250 O-FucT: GDP-fucose pr 99.0 2.1E-09 4.6E-14 120.6 10.1 140 527-677 170-343 (351)
19 PF01531 Glyco_transf_11: Glyc 98.9 6.7E-09 1.5E-13 114.9 11.8 227 405-674 29-267 (298)
20 KOG1118|consensus 98.9 7.9E-10 1.7E-14 118.1 2.7 59 800-860 303-361 (366)
21 smart00326 SH3 Src homology 3 98.8 2E-09 4.4E-14 87.9 3.8 55 804-859 3-57 (58)
22 KOG3775|consensus 98.8 1.4E-09 2.9E-14 118.6 2.8 70 799-868 258-327 (482)
23 KOG2199|consensus 98.8 1.1E-09 2.4E-14 120.5 1.6 59 801-861 213-271 (462)
24 cd00174 SH3 Src homology 3 dom 98.8 3.8E-09 8.3E-14 85.2 4.3 52 806-858 2-53 (54)
25 KOG2996|consensus 98.8 3.3E-09 7.2E-14 120.6 4.9 52 806-859 808-861 (865)
26 PF00018 SH3_1: SH3 domain; I 98.8 6.4E-09 1.4E-13 83.8 4.1 48 740-787 1-48 (48)
27 KOG3632|consensus 98.7 8.9E-09 1.9E-13 122.7 6.1 123 733-859 1135-1306(1335)
28 KOG0162|consensus 98.6 2.8E-08 6.1E-13 115.6 3.9 55 803-859 1051-1105(1106)
29 KOG3601|consensus 98.6 2E-08 4.4E-13 103.0 2.0 145 688-859 33-217 (222)
30 KOG4792|consensus 98.5 7.7E-08 1.7E-12 99.2 5.4 116 740-858 128-282 (293)
31 PF07653 SH3_2: Variant SH3 do 98.5 7.5E-08 1.6E-12 79.8 4.1 52 739-792 2-54 (55)
32 KOG1702|consensus 98.5 5.3E-08 1.2E-12 98.8 3.0 57 803-859 207-263 (264)
33 cd00174 SH3 Src homology 3 dom 98.4 3.6E-07 7.7E-12 73.6 5.0 52 739-791 2-53 (54)
34 smart00326 SH3 Src homology 3 98.4 3.5E-07 7.5E-12 74.6 4.7 54 738-792 4-57 (58)
35 KOG2070|consensus 98.3 2.1E-07 4.5E-12 104.8 3.1 57 804-862 18-74 (661)
36 KOG2856|consensus 98.3 1.1E-07 2.4E-12 103.8 0.5 54 804-858 415-469 (472)
37 KOG2546|consensus 98.1 1.2E-06 2.6E-11 97.6 3.3 56 804-861 424-479 (483)
38 KOG2070|consensus 98.0 3.7E-06 8E-11 95.0 2.7 56 736-793 17-72 (661)
39 KOG2199|consensus 97.9 3.5E-06 7.6E-11 93.4 1.6 57 736-794 215-271 (462)
40 KOG1118|consensus 97.9 5.7E-06 1.2E-10 89.1 2.3 55 738-794 308-362 (366)
41 KOG3775|consensus 97.8 6.4E-06 1.4E-10 90.5 2.1 62 733-794 259-320 (482)
42 KOG3655|consensus 97.8 1.1E-05 2.4E-10 91.6 2.1 56 802-858 426-481 (484)
43 KOG1702|consensus 97.7 1.7E-05 3.6E-10 81.1 2.8 58 735-792 206-263 (264)
44 KOG4773|consensus 97.7 1.4E-05 3.1E-10 87.5 2.2 156 688-862 44-232 (386)
45 KOG2856|consensus 97.7 1.6E-05 3.5E-10 87.3 1.6 66 724-792 404-470 (472)
46 KOG3875|consensus 97.7 1.3E-05 2.7E-10 86.7 0.7 63 804-867 269-336 (362)
47 KOG0162|consensus 97.5 5.6E-05 1.2E-09 88.9 3.9 54 737-792 1052-1105(1106)
48 KOG1264|consensus 97.5 5.2E-05 1.1E-09 90.0 3.3 59 803-862 774-832 (1267)
49 PF10250 O-FucT: GDP-fucose pr 97.4 9.3E-05 2E-09 83.3 3.0 50 151-201 1-58 (351)
50 KOG3523|consensus 97.4 2.8E-05 6.2E-10 90.3 -1.5 59 805-863 610-668 (695)
51 KOG3601|consensus 97.2 7.7E-05 1.7E-09 77.2 -0.4 108 740-859 4-112 (222)
52 KOG2996|consensus 97.0 0.00042 9.1E-09 80.1 3.5 52 740-793 809-862 (865)
53 KOG4792|consensus 97.0 0.00027 5.8E-09 73.6 1.7 56 803-859 124-179 (293)
54 PF01531 Glyco_transf_11: Glyc 96.9 0.0016 3.4E-08 72.4 7.1 82 268-354 131-221 (298)
55 KOG3565|consensus 96.9 0.00066 1.4E-08 82.0 4.1 121 741-861 502-637 (640)
56 KOG3849|consensus 96.7 0.0038 8.3E-08 66.9 7.4 125 530-676 210-367 (386)
57 KOG1843|consensus 96.7 0.00076 1.6E-08 75.6 2.1 54 804-859 417-472 (473)
58 KOG2528|consensus 96.6 0.0013 2.8E-08 74.6 3.3 58 805-864 4-62 (490)
59 KOG4429|consensus 96.6 0.001 2.3E-08 71.4 2.2 63 796-860 356-418 (421)
60 KOG4575|consensus 96.3 0.0031 6.7E-08 73.9 3.9 56 804-860 9-65 (874)
61 KOG2546|consensus 96.3 0.0024 5.1E-08 72.1 2.6 55 738-794 425-479 (483)
62 KOG1264|consensus 96.1 0.0032 6.9E-08 75.5 2.6 57 740-797 778-834 (1267)
63 KOG3523|consensus 96.0 0.0015 3.2E-08 76.5 -0.4 71 724-796 598-668 (695)
64 KOG0199|consensus 95.9 0.01 2.3E-07 71.0 5.6 52 807-858 378-430 (1039)
65 KOG3655|consensus 95.9 0.0041 8.9E-08 71.3 2.2 53 739-792 430-482 (484)
66 KOG0515|consensus 95.6 0.0054 1.2E-07 70.8 1.9 51 805-857 685-738 (752)
67 KOG3875|consensus 95.6 0.0038 8.2E-08 68.0 0.4 57 736-793 268-330 (362)
68 PF03254 XG_FTase: Xyloglucan 95.5 0.75 1.6E-05 54.1 18.7 89 267-360 271-375 (476)
69 KOG3632|consensus 95.4 0.0097 2.1E-07 72.8 3.2 135 652-793 1143-1307(1335)
70 KOG2528|consensus 95.3 0.0077 1.7E-07 68.5 1.6 53 739-792 5-58 (490)
71 KOG3849|consensus 95.2 0.25 5.3E-06 53.5 12.2 99 292-398 227-370 (386)
72 KOG0197|consensus 94.9 0.015 3.2E-07 67.9 2.6 59 803-861 11-70 (468)
73 KOG1451|consensus 94.5 0.032 6.9E-07 65.4 3.8 59 732-792 752-811 (812)
74 KOG1451|consensus 93.7 0.043 9.2E-07 64.3 2.9 54 804-859 757-811 (812)
75 KOG3565|consensus 93.2 0.047 1E-06 66.4 2.2 58 736-793 578-636 (640)
76 KOG4773|consensus 93.0 0.013 2.7E-07 65.0 -2.7 144 680-841 131-277 (386)
77 KOG0199|consensus 92.9 0.075 1.6E-06 64.1 3.3 50 740-791 380-430 (1039)
78 KOG3771|consensus 92.7 0.057 1.2E-06 62.4 1.9 52 804-857 401-453 (460)
79 KOG0609|consensus 92.5 0.062 1.3E-06 63.0 1.9 56 803-858 214-279 (542)
80 KOG2222|consensus 91.9 0.043 9.3E-07 62.8 -0.3 67 804-872 549-616 (848)
81 KOG3725|consensus 91.8 0.06 1.3E-06 57.4 0.7 54 803-858 317-372 (375)
82 KOG3771|consensus 91.7 0.087 1.9E-06 60.9 1.9 52 738-790 402-458 (460)
83 KOG1843|consensus 91.5 0.11 2.3E-06 59.0 2.2 52 739-792 419-472 (473)
84 KOG3725|consensus 89.8 0.12 2.6E-06 55.2 0.7 54 736-791 317-372 (375)
85 KOG4278|consensus 88.7 0.34 7.4E-06 57.9 3.4 68 804-872 91-158 (1157)
86 KOG3557|consensus 88.1 0.2 4.2E-06 59.8 0.9 64 799-868 496-559 (721)
87 KOG4278|consensus 86.3 0.52 1.1E-05 56.4 3.0 55 738-794 92-147 (1157)
88 KOG0197|consensus 83.5 0.52 1.1E-05 55.3 1.4 56 738-793 13-69 (468)
89 KOG4575|consensus 81.9 1.2 2.7E-05 53.1 3.6 56 734-790 6-62 (874)
90 KOG4429|consensus 76.9 1.8 3.9E-05 47.3 2.7 102 689-792 311-417 (421)
91 KOG0515|consensus 76.0 1.4 3E-05 51.8 1.6 50 738-790 685-738 (752)
92 KOG2222|consensus 74.2 0.7 1.5E-05 53.3 -1.3 74 716-791 526-601 (848)
93 smart00743 Agenet Tudor-like d 57.6 7.9 0.00017 32.5 2.2 23 821-843 2-24 (61)
94 PRK15175 Vi polysaccharide exp 54.8 16 0.00035 42.0 4.8 85 751-838 222-337 (355)
95 KOG3557|consensus 52.2 6.3 0.00014 47.7 1.0 60 732-793 496-555 (721)
96 COG0761 lytB 4-Hydroxy-3-methy 49.8 28 0.00061 38.7 5.4 88 603-703 172-264 (294)
97 KOG3812|consensus 47.2 9.4 0.0002 42.9 1.3 42 814-855 76-118 (475)
98 KOG0609|consensus 42.2 14 0.0003 44.1 1.7 51 740-791 218-279 (542)
99 PF11302 DUF3104: Protein of u 41.9 17 0.00036 32.6 1.8 24 820-843 4-33 (75)
100 PHA01750 hypothetical protein 39.5 1.1E+02 0.0024 26.7 6.2 46 50-102 25-70 (75)
101 PF03894 XFP: D-xylulose 5-pho 38.7 7.2 0.00016 40.3 -1.1 45 812-857 47-92 (179)
102 PF03808 Glyco_tran_WecB: Glyc 38.6 3.2E+02 0.0069 27.9 10.9 98 594-720 47-149 (172)
103 smart00287 SH3b Bacterial SH3 37.4 36 0.00077 28.3 3.1 37 821-858 26-62 (63)
104 cd02515 Glyco_transf_6 Glycosy 33.6 96 0.0021 34.4 6.4 107 551-677 33-153 (271)
105 KOG4384|consensus 30.7 32 0.00069 39.2 2.2 57 807-865 140-198 (361)
106 PF14603 hSH3: Helically-exten 30.7 68 0.0015 29.6 3.9 61 729-790 5-69 (89)
107 COG1083 NeuA CMP-N-acetylneura 28.7 2.6E+02 0.0055 30.3 8.2 77 593-676 42-119 (228)
108 KOG3416|consensus 26.8 33 0.00071 33.7 1.3 31 821-851 61-91 (134)
109 PF08239 SH3_3: Bacterial SH3 26.7 67 0.0015 25.9 3.0 37 821-858 18-55 (55)
110 PF15036 IL34: Interleukin 34; 26.2 1.5E+02 0.0033 30.2 5.7 59 8-78 58-117 (169)
111 cd06533 Glyco_transf_WecG_TagA 24.9 2.4E+02 0.0053 28.8 7.3 73 595-676 46-123 (171)
112 smart00287 SH3b Bacterial SH3 24.4 98 0.0021 25.6 3.6 38 753-791 25-62 (63)
113 COG0595 mRNA degradation ribon 24.2 3.2E+02 0.0069 33.6 9.1 52 640-709 213-264 (555)
114 PF14603 hSH3: Helically-exten 24.1 60 0.0013 30.0 2.3 43 816-859 29-71 (89)
115 COG3700 AphA Acid phosphatase 23.2 23 0.00049 36.9 -0.6 68 231-308 54-133 (237)
116 TIGR00649 MG423 conserved hypo 21.7 1.9E+02 0.0041 33.8 6.5 114 640-772 205-333 (422)
117 COG3103 SH3 domain protein [Si 21.2 1.4E+02 0.0031 31.8 4.8 93 754-857 49-149 (205)
118 COG1212 KdsB CMP-2-keto-3-deox 20.6 1.1E+02 0.0024 33.2 3.9 31 594-625 42-72 (247)
No 1
>KOG3705|consensus
Probab=100.00 E-value=1.1e-127 Score=1027.31 Aligned_cols=455 Identities=53% Similarity=0.973 Sum_probs=434.0
Q ss_pred hhHHHHHHHHHHhHHHHHHHHHHHHhhhhhhhccCchhhhHHHHHHHHhhHHHHHHHHHHHHHhhccCCCchhhhhhhhh
Q psy16352 48 IQYELARKRVSKDVQELWYYVSSELTQFRTELVNKTPQLAGKLDRIIAETAEHKRSLLHVLDTLKARDSFDDWRWKESLD 127 (905)
Q Consensus 48 ~~~e~~rr~~~~~~~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~sl~~~~~~l~~~~~~~~w~~~e~~~ 127 (905)
.+||.+||||+++++|||||++|||.|+|+.. ..++..+.+.+|-++++|++|||.|+..|++.||+++||.+|+..
T Consensus 116 ~dhE~~rRri~~~i~E~w~fl~Sel~kvr~~~---~~dl~e~~~~~LL~~~~h~rSlm~d~~~l~q~dG~e~wR~Kea~d 192 (580)
T KOG3705|consen 116 VDHEVQRRRIDDRIREMWYFLHSELGKVRKAA---SADLIENSTKILLETAEHMRSLMGDSAQLEQLDGSEEWRFKEATD 192 (580)
T ss_pred ccHHHHHHHHHhhHHHHHHHHHHHHHHHhhhh---hhhHHhhHHHHHHhhHHHHHHHHhHHHHHHhccCcHHHHHhHHhH
Confidence 58999999999999999999999999998863 458889999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHhhcCCCCCCCCCCeEEEEecCCccchhHHHHHHHHHHHHHhcCcEEEEcCCCCCCCCCCcccccccCCCCC
Q psy16352 128 LSDLVQRRLEYLQNPPDCRTARKLVCELNKGCGYGCQLHHVVYCFIVAYATQRTLILDSKEWSYSRGGWEEVFQPVSKTC 207 (905)
Q Consensus 128 Lt~~vQ~~I~~~QNP~dC~~Ak~L~c~~~~~cGfGc~lH~~~~cl~~A~~~nRtli~d~~~~~Y~~~~w~~~F~P~S~~C 207 (905)
||++|||||+++|||+||++||+|||+++++||||||+||++|||++||+|.||||+.+.+|.|+.|||+++|+|+|++|
T Consensus 193 lt~lvqrri~~LQNPkdCs~AkkLVCnlnKgCGyGCQLHHVvYCfi~AyaTqRtliLks~gWrY~~gGWe~VF~pvS~~c 272 (580)
T KOG3705|consen 193 LTQLVQRRIEKLQNPKDCSEAKKLVCNLNKGCGYGCQLHHVVYCFITAYATQRTLILKSDGWRYSSGGWESVFKPVSKCC 272 (580)
T ss_pred HHHHHHHHHHHhcChHhhHHHhhheeeccCCcccccceeeeeEeeeeeeecceEEEEecCCceecCCChhhhhhhhhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCC--CCcceEEeccccccCCCCCCCCCCCCcchhHHHhhhcCCCchhHHHHHHHHHhCCChhHHHHHH
Q psy16352 208 TSPEGVSNSSWPGN--NDTQVIYLPIIEFINPRPPYLPLAIPEDLEPRLSRLHGDPIVWWIGQFLMFLNNPTPNTREIVA 285 (905)
Q Consensus 208 ~~~~~~~~~~w~~~--~~~~vv~~pi~~~~~~~~~f~p~~~p~~l~~~l~~~h~~P~~Ww~GQ~~~YL~RP~~~~~~~i~ 285 (905)
.+..+.+..+||+. ++++|+.+||+|++.++|||+|+++|+||+++|.++||+|.+||+||+++|||||||+++++|+
T Consensus 273 ~D~~~~nT~~wpg~~~~n~qVv~LpIvDSL~prPpyLPlAVPEdLa~rL~rlHgdP~vwwVgqFikYL~Rpqp~t~~~l~ 352 (580)
T KOG3705|consen 273 FDEAVGNTEAWPGAEPSNAQVVSLPIVDSLIPRPPYLPLAVPEDLAERLTRLHGDPPVWWVGQFIKYLMRPQPATQEKLD 352 (580)
T ss_pred cccccccccCCCCCCCCCceEEEeecccccCCCCCCccccCcHHHHHHHHHhcCCCceeeHHHHHHHHhCCChhhHHHHH
Confidence 99998888999985 4889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhcCCCCCeeeeeeeecccccccccCCChHHHHHHHHHHHHHHhccCCCceeEEEEEecchhhhhHHHHhhhhhhhh
Q psy16352 286 KYGEKIKFQKPIVGIHIRRTDKVDTEAALHPVEEYMTGVEEYYKQLALTQTVDVKRVYVATDDASVLTEIREKSLLHVLG 365 (905)
Q Consensus 286 ~~~~~l~f~~PiVgvHVRrtDK~~~Ea~~~~leeYM~~v~~~~~~~~~~~~~~~~ri~LaTDd~~vi~EakekSL~~Dle 365 (905)
++.++++|.+||||||||||||++|||+||++||||++||.||+.++
T Consensus 353 ~a~k~lg~~~PivGvhvRRTDKVGTEAAfH~~eEYM~~vE~~f~~le--------------------------------- 399 (580)
T KOG3705|consen 353 KALKSLGLDKPIVGVHVRRTDKVGTEAAFHALEEYMEWVEIWFKVLE--------------------------------- 399 (580)
T ss_pred HHHHhCCCCCceeeEEEEecccccchhhhhhHHHHHHHHHHHHHHHH---------------------------------
Confidence 99999999999999999999999999999999999999999986210
Q ss_pred hhccCCchhhhhHhhhhhhHHHHHHHHHhhcCCCCccccceEEEeccCCcchHHHHHHHHHHHHHHHHcCcEEEEecCCC
Q psy16352 366 ILKARDSFDDWRWKESLDLSDLVQRRLEYLQNPPDCRTARKLVCELNKGCGYGCQLHHVVYCFIVAYATRRTLILDSKEW 445 (905)
Q Consensus 366 ~L~~~d~~~~wr~~~~~~l~~~vq~~I~~~QNP~dCs~AK~Lvc~l~~~~GfG~~lh~l~~cL~lA~~t~RtLivd~~~w 445 (905)
.
T Consensus 400 ---------------------------------------------~---------------------------------- 400 (580)
T KOG3705|consen 400 ---------------------------------------------K---------------------------------- 400 (580)
T ss_pred ---------------------------------------------H----------------------------------
Confidence 0
Q ss_pred cccCCCCccccccCCCCCCCCCCCCCCCCCCCCCCCeEEeceeeecCCCCCCCCCCCCCCchhHHhhhcCCchHHHHHHH
Q psy16352 446 SYSRGGWEEVFQPVSKTCTSPEGVSNSGWPGNNDTQVIYLPIIEFINPRPPYLPLAIPEDLEPRLSRLHGDPIVWWIGQF 525 (905)
Q Consensus 446 ~Y~~~gw~~~F~P~S~~C~~~~~~~~~~W~~~~~~~vv~~pii~~~~~~~~f~p~~vP~~l~~~L~~~h~~p~~Ww~gq~ 525 (905)
T Consensus 401 -------------------------------------------------------------------------------- 400 (580)
T KOG3705|consen 401 -------------------------------------------------------------------------------- 400 (580)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhccCChhHHHHHHHHhhhccCCCCcceeEEecCCCCCccccccChHHHHHHHHHHHHHHhccCCCCcceEEEEcCCH
Q psy16352 526 LTFLNNPTPNTREIVAKYGEKIKFQKPIVGIHIRRTDKVDTEAALHPVEEYMTGVEEYYKQLALTQTVDVKRVYVATDDA 605 (905)
Q Consensus 526 ~~YLlRP~~~~~~~I~~~~~~l~f~~PiVGVHIRrgDK~~~Ea~~~~l~eYm~~ve~~~~~~~~~~~~~~~~IfLATDDp 605 (905)
|| | ...+|||||||||
T Consensus 401 ----------------------------------rg-~-----------------------------~~~rRiflAsDDp 416 (580)
T KOG3705|consen 401 ----------------------------------RG-K-----------------------------PLERRIFLASDDP 416 (580)
T ss_pred ----------------------------------hC-C-----------------------------chhheEEEecCCc
Confidence 00 0 0236999999999
Q ss_pred HHHHHHHhhCCCcEEEcCCcccccccccccchhhhhhHHHHHHHHHhcCCeEEEcccCcHhHHHHHHHhccCCCceeecc
Q psy16352 606 SVLTEIREKYPQYSVLGDPSIARTASLEHRYLKSSLLGIITDLHYLSNCDHLVCTFSSQICRTAYEQMNAKFPDASDRYR 685 (905)
Q Consensus 606 ~Vi~e~k~~yp~y~~i~~~~~~~~a~~~~R~s~~~l~~~l~Dl~lLs~cD~~VgT~SSnv~RLa~eLrqt~~~d~~~~~~ 685 (905)
.|+.|++.+||+|.||++++++++|++.+||+++++.|+++||++||++||+||||||+|||++||+|||++
T Consensus 417 ~vv~EAk~kYPnYe~igd~eia~~A~l~nRYTd~sL~GvIlDIh~LS~~d~LVCTFSSQVCRvaYEimQt~~-------- 488 (580)
T KOG3705|consen 417 TVVPEAKNKYPNYEVIGDTEIAKTAQLNNRYTDASLMGVILDIHILSKVDYLVCTFSSQVCRVAYEIMQTSG-------- 488 (580)
T ss_pred hhchHhhccCCCcEEeccHHHHHHhhccccchhhhhhheeeeeeeecccceEEEechHHHHHHHHHHHhccC--------
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccccCCCceeeeeehhhHhhhhccCCCCCCCeeecccccccCCCcccceeeecCCCCCCCCCccccCCcEEEecc
Q psy16352 686 SLDDIYYFGVPTATIWCICRTAYEQMNAKFPDASDRYRSLDDIYYFGGQLSRIHIAVLPHTPRHSSEMALLVGDRISVAG 765 (905)
Q Consensus 686 slD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~~~~~~~~v~~~~~~~~~~El~l~~GD~I~~~~ 765 (905)
|||+.+|+|||||||||||++|.++|+++|.|++++||+|++||+|+|+|
T Consensus 489 ------------------------------pDa~~~FhSLDDIYYfGGQnAHn~ivi~aH~prt~~ei~l~vGD~vgvAG 538 (580)
T KOG3705|consen 489 ------------------------------PDAGSKFHSLDDIYYFGGQNAHNVIVIEAHIPRTNKEIDLKVGDKVGVAG 538 (580)
T ss_pred ------------------------------CCcccccccccceeeecCccccceEEEEecCCCcccccCcccCCeeeecc
Confidence 99999999999999999999999999999999999999999999999999
Q ss_pred ccccceeeeeecCCCceeeeeCcccccCC----CCChh
Q psy16352 766 NHWNGYSKGRNLRTDQLALYPTFKTSADS----FPAFA 799 (905)
Q Consensus 766 ~~~~G~~~G~n~~tg~~GlfP~~~v~~~~----~p~~~ 799 (905)
||||||++|+|.+|++.|+||+|||++.. +|.|.
T Consensus 539 NHWdGySKG~Nr~t~~~GlfPSyKvrek~~t~k~ply~ 576 (580)
T KOG3705|consen 539 NHWDGYSKGTNRQTYKEGLFPSYKVREKFITIKIPLYV 576 (580)
T ss_pred cccccccccccccccccCCCccceeeeeEEEeeecchh
Confidence 99999999999999999999999999764 55543
No 2
>KOG3705|consensus
Probab=100.00 E-value=3.8e-75 Score=623.41 Aligned_cols=403 Identities=47% Similarity=0.812 Sum_probs=314.5
Q ss_pred HHhhhhhhhhhhccCCchhhhhHhhhhhhHHHHHHHHHhhcCCCCccccceEEEeccCCcchHHHHHHHHHHHHHHHHcC
Q psy16352 356 REKSLLHVLGILKARDSFDDWRWKESLDLSDLVQRRLEYLQNPPDCRTARKLVCELNKGCGYGCQLHHVVYCFIVAYATR 435 (905)
Q Consensus 356 kekSL~~Dle~L~~~d~~~~wr~~~~~~l~~~vq~~I~~~QNP~dCs~AK~Lvc~l~~~~GfG~~lh~l~~cL~lA~~t~ 435 (905)
.+.|||+|+++|.+.||+++||.|+...||++||+||+++|||+||++||+|+|+++++||+||++||++||++.|++|.
T Consensus 165 h~rSlm~d~~~l~q~dG~e~wR~Kea~dlt~lvqrri~~LQNPkdCs~AkkLVCnlnKgCGyGCQLHHVvYCfi~AyaTq 244 (580)
T KOG3705|consen 165 HMRSLMGDSAQLEQLDGSEEWRFKEATDLTQLVQRRIEKLQNPKDCSEAKKLVCNLNKGCGYGCQLHHVVYCFITAYATQ 244 (580)
T ss_pred HHHHHHhHHHHHHhccCcHHHHHhHHhHHHHHHHHHHHHhcChHhhHHHhhheeeccCCcccccceeeeeEeeeeeeecc
Confidence 66799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEecCCCcccCCCCccccccCCCCCCCCCCCCCCCCCCCC--CCCeEEeceeeecCCCCCCCCCCCCCCchhHHhhh
Q psy16352 436 RTLILDSKEWSYSRGGWEEVFQPVSKTCTSPEGVSNSGWPGNN--DTQVIYLPIIEFINPRPPYLPLAIPEDLEPRLSRL 513 (905)
Q Consensus 436 RtLivd~~~w~Y~~~gw~~~F~P~S~~C~~~~~~~~~~W~~~~--~~~vv~~pii~~~~~~~~f~p~~vP~~l~~~L~~~ 513 (905)
||||+...+|.|+.+||+.+|+|+|+||.++...+...|++.. +.+||.+||++++.++|+|+|+++|+|+.++|.++
T Consensus 245 RtliLks~gWrY~~gGWe~VF~pvS~~c~D~~~~nT~~wpg~~~~n~qVv~LpIvDSL~prPpyLPlAVPEdLa~rL~rl 324 (580)
T KOG3705|consen 245 RTLILKSDGWRYSSGGWESVFKPVSKCCFDEAVGNTEAWPGAEPSNAQVVSLPIVDSLIPRPPYLPLAVPEDLAERLTRL 324 (580)
T ss_pred eEEEEecCCceecCCChhhhhhhhhhcccccccccccCCCCCCCCCceEEEeecccccCCCCCCccccCcHHHHHHHHHh
Confidence 9999999999999999999999999999999777778899854 68999999999999999999999999999999999
Q ss_pred cCCchHHHHHHHhhhhccCChhHHHHHHHHhhhccCCCCcceeEEecCCCCCccccccChHHHHHHHHHHHHHHhccCCC
Q psy16352 514 HGDPIVWWIGQFLTFLNNPTPNTREIVAKYGEKIKFQKPIVGIHIRRTDKVDTEAALHPVEEYMTGVEEYYKQLALTQTV 593 (905)
Q Consensus 514 h~~p~~Ww~gq~~~YLlRP~~~~~~~I~~~~~~l~f~~PiVGVHIRrgDK~~~Ea~~~~l~eYm~~ve~~~~~~~~~~~~ 593 (905)
||+|.+||.||+++|||||||+++++|++++++|+|.+|+||||||||||+++||++|+++|||.+||.||+.++
T Consensus 325 HgdP~vwwVgqFikYL~Rpqp~t~~~l~~a~k~lg~~~PivGvhvRRTDKVGTEAAfH~~eEYM~~vE~~f~~le----- 399 (580)
T KOG3705|consen 325 HGDPPVWWVGQFIKYLMRPQPATQEKLDKALKSLGLDKPIVGVHVRRTDKVGTEAAFHALEEYMEWVEIWFKVLE----- 399 (580)
T ss_pred cCCCceeeHHHHHHHHhCCChhhHHHHHHHHHhCCCCCceeeEEEEecccccchhhhhhHHHHHHHHHHHHHHHH-----
Confidence 999999999999999999999999999999999999999999999999999999999999999999999998752
Q ss_pred CcceEEEEcCCHHHHHHHHhhCCCcEEEc--CCcccccccccccchhhhhhHHHHHHHHHhcCCeE-EEcccCcHhHHHH
Q psy16352 594 DVKRVYVATDDASVLTEIREKYPQYSVLG--DPSIARTASLEHRYLKSSLLGIITDLHYLSNCDHL-VCTFSSQICRTAY 670 (905)
Q Consensus 594 ~~~~IfLATDDp~Vi~e~k~~yp~y~~i~--~~~~~~~a~~~~R~s~~~l~~~l~Dl~lLs~cD~~-VgT~SSnv~RLa~ 670 (905)
++ -.++. ...|+- |+....-| .+.|..- .++-|-.++-.+..= =-|- .
T Consensus 400 --~r--g~~~~------------rRiflAsDDp~vv~EA--k~kYPnY---e~igd~eia~~A~l~nRYTd--------~ 450 (580)
T KOG3705|consen 400 --KR--GKPLE------------RRIFLASDDPTVVPEA--KNKYPNY---EVIGDTEIAKTAQLNNRYTD--------A 450 (580)
T ss_pred --Hh--CCchh------------heEEEecCCchhchHh--hccCCCc---EEeccHHHHHHhhccccchh--------h
Confidence 11 11110 122332 22211111 1111110 011121111111000 0000 0
Q ss_pred HHHhccCCCceeecccccccccccCCCceeee----eehhhHhhhhccCCCCCCCeeecccccccCCCcccceeeecCCC
Q psy16352 671 EQMNAKFPDASDRYRSLDDIYYFGVPTATIWC----ICRTAYEQMNAKFPDASDRYRSLDDIYYFGGQLSRIHIAVLPHT 746 (905)
Q Consensus 671 eLrqt~~~d~~~~~~slD~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~~~~~~~~v~~~~~ 746 (905)
-|| |-+.++..==-.++ -|.- .||-+||-|| +-- .++.++ |.
T Consensus 451 sL~----GvIlDIh~LS~~d~-------LVCTFSSQVCRvaYEimQ---t~~-------------pDa~~~-------Fh 496 (580)
T KOG3705|consen 451 SLM----GVILDIHILSKVDY-------LVCTFSSQVCRVAYEIMQ---TSG-------------PDAGSK-------FH 496 (580)
T ss_pred hhh----heeeeeeeecccce-------EEEechHHHHHHHHHHHh---ccC-------------CCcccc-------cc
Confidence 111 11111111000111 1211 4899999888 211 111111 11
Q ss_pred CCCCCCccccCCcEEEeccccccceeee-eecCCCceeeeeCcccccCCCCChhhhhhhhheecccCCCCCCCCccccCC
Q psy16352 747 PRHSSEMALLVGDRISVAGNHWNGYSKG-RNLRTDQLALYPTFKTSADSFPAFAYIFRRIHIAVLPHTPRHSSEMDLMVG 825 (905)
Q Consensus 747 ~~~~~El~l~~GD~I~~~~~~~~G~~~G-~n~~tg~~GlfP~~~v~~~~~p~~~~~~~~~~~a~y~y~~~~~dEL~l~~G 825 (905)
+. |+ =|+.| .| ..-++|+|++.|++.+||.|+||
T Consensus 497 SL--DD-----------------IYYfGGQn--------------------------AHn~ivi~aH~prt~~ei~l~vG 531 (580)
T KOG3705|consen 497 SL--DD-----------------IYYFGGQN--------------------------AHNVIVIEAHIPRTNKEIDLKVG 531 (580)
T ss_pred cc--cc-----------------eeeecCcc--------------------------ccceEEEEecCCCcccccCcccC
Confidence 11 11 13333 21 13468999999999999999999
Q ss_pred CEEEEeeeeecceecceecCCCceeeccCCCceecccCCCCCCCCC
Q psy16352 826 DRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVPHVETARFPTYPE 871 (905)
Q Consensus 826 D~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~v~~~~~~~~~~~ 871 (905)
|+|-|..+++||+.+|+|++|++.|+||+++|.+-++++.+|+|+.
T Consensus 532 D~vgvAGNHWdGySKG~Nr~t~~~GlfPSyKvrek~~t~k~ply~~ 577 (580)
T KOG3705|consen 532 DKVGVAGNHWDGYSKGTNRQTYKEGLFPSYKVREKFITIKIPLYVL 577 (580)
T ss_pred CeeeecccccccccccccccccccCCCccceeeeeEEEeeecchhh
Confidence 9999999999999999999999999999999999999999999875
No 3
>KOG4225|consensus
Probab=99.98 E-value=3.2e-33 Score=305.18 Aligned_cols=179 Identities=19% Similarity=0.235 Sum_probs=150.0
Q ss_pred HHHHHhccCCCceeecccccccccccCCCceeeeeehhhHh------hhhccCCCCCCCeeecccccccCCCcccceeee
Q psy16352 669 AYEQMNAKFPDASDRYRSLDDIYYFGVPTATIWCICRTAYE------QMNAKFPDASDRYRSLDDIYYFGGQLSRIHIAV 742 (905)
Q Consensus 669 a~eLrqt~~~d~~~~~~slD~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ld~~~~~~~~~~~~~~v~ 742 (905)
..||.... ||++|+.+++|+|||+|||||++||||.+|+| ++| |-++.+.+.|+ +|.+ +|.
T Consensus 244 ~kEL~~~k-GDIVyI~rkvD~nWyeGEhhGr~GifP~sYvE~~~~~e~~q---P~~~~P~q~~~----~g~a-----~A~ 310 (489)
T KOG4225|consen 244 PKELPFNK-GDIVYILRKVDQNWYEGEHHGRVGIFPASYVEILTPREKAQ---PARPPPQQVLE----QGEA-----IAK 310 (489)
T ss_pred ccccccCC-CCEEEEEeeccCceeeeeecceecceechheeecCcccccC---cCCCCcccccc----cccc-----ccc
Confidence 77886666 79999999999999999999999999999999 334 66688888998 7777 999
Q ss_pred cCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCcccccCC---------CC-----C-----------
Q psy16352 743 LPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSADS---------FP-----A----------- 797 (905)
Q Consensus 743 ~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~~~---------~p-----~----------- 797 (905)
|+|++.++.||+++.||+|.+....-.-|++|.|.-||++|+||..+|+... +| +
T Consensus 311 y~F~~~s~~Els~~kge~v~L~r~vd~nw~eG~i~g~~rqgifP~SyVev~~~~~~~~~~~~~~~p~~p~~s~~~~~~~~ 390 (489)
T KOG4225|consen 311 YNFNADSPVELSLRKGERVTLTRQVDENWYEGKIPGTNRQGIFPASYVEVIKSPKLELPLDYPDLPIPPRSSNELRPLSE 390 (489)
T ss_pred CCCCCCCchhcccccCceEEEEEeccCceeeccccccccccccchhHhhhhhccccccccccCCCCCCcccchhhccccc
Confidence 9999999999999999999986544444666666668999999998887422 00 0
Q ss_pred ----------h--------------------------hhhhhhhheecccCCCCCCCCccccCCCEEEEeeeeecceecc
Q psy16352 798 ----------F--------------------------AYIFRRIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKG 841 (905)
Q Consensus 798 ----------~--------------------------~~~~~~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G 841 (905)
. ......-.+|||+|.|+++|||||+.||+|.|+++|+|||+.|
T Consensus 391 ~s~~~~~~~~~t~~~~q~~~n~~qepr~~~~~~~~~qt~~~~l~yrAly~Y~pqnedeLEl~egDii~VmeKcddgWfvG 470 (489)
T KOG4225|consen 391 DSMKNAWPQTHTQSSTQPPENFPQEPRVTEKNDAHSQTSSEPLKYRALYSYRPQNEDELELREGDIIDVMEKCDDGWFVG 470 (489)
T ss_pred chhhhcccccccccccCCCCCcccccccccccCcccCCCCCcccceeccccCCCCchhheeccCCEEeeeecccCcceec
Confidence 0 0001112499999999999999999999999999999999999
Q ss_pred eecCCCceeeccCCCceec
Q psy16352 842 RNLRTDQLALYPTFKSVPH 860 (905)
Q Consensus 842 ~n~rtg~~GlfP~~~v~~v 860 (905)
+.+|||+.|+||.|||+++
T Consensus 471 ts~rtg~fGtFPgnyV~~~ 489 (489)
T KOG4225|consen 471 TSRRTGKFGTFPGNYVKRL 489 (489)
T ss_pred cceecccccccCccccccC
Confidence 9999999999999999863
No 4
>PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation. NodZ is required for the addition of a 2-O-methylfucose residue to the terminal reducing N-acetylglucosamine of the nodulation signal. This substitution is essential for the biological activity of this molecule. Mutations in nodZ result in defective nodulation. nodZ represents a unique nodulation gene that is not under the control of NodD and yet is essential for the synthesis of an active nodulation signal [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009312 oligosaccharide biosynthetic process, 0009877 nodulation; PDB: 3SIX_A 2HLH_A 2HHC_A 3SIW_A 2OCX_A.
Probab=99.91 E-value=7.8e-25 Score=233.62 Aligned_cols=261 Identities=20% Similarity=0.251 Sum_probs=142.6
Q ss_pred ceEEEeccCCcchHHHHHHHHHHHHHHHHcCcEEEEecCCCcccC----CCCccccccCCC------CCCCCCCCCCCCC
Q psy16352 405 RKLVCELNKGCGYGCQLHHVVYCFIVAYATRRTLILDSKEWSYSR----GGWEEVFQPVSK------TCTSPEGVSNSGW 474 (905)
Q Consensus 405 K~Lvc~l~~~~GfG~~lh~l~~cL~lA~~t~RtLivd~~~w~Y~~----~gw~~~F~P~S~------~C~~~~~~~~~~W 474 (905)
++++|. +..|||..|..++.|+.+|..|||+|+|||++..|.. |.|.-+|+|+-+ .|.++-+.- ..
T Consensus 3 r~~~~r--~r~g~gd~l~~la~aw~~a~~~~r~l~idw~~s~~~~~~f~n~f~~ffepv~~i~~~~~~~~d~i~~~--~~ 78 (321)
T PF05830_consen 3 RFVVSR--RRTGLGDCLWSLAAAWRYAKRTGRTLVIDWRGSCYLDQPFTNAFPVFFEPVEDIAGVRVICDDRINQF--SF 78 (321)
T ss_dssp -EEEEE----S-HHHHHHHHHHHHHHHHHHT-EEEEE-BT-TT-SSTTSBSHHHHB---SEETTEEEE-SGGGGT-----
T ss_pred ceEEEe--ccCCchhHHHHHHHHHHHHHHhCCeEEEEcCCceecCCcccccCCcccchhhhhcCceeEecchhhhh--cC
Confidence 577776 5899999999999999999999999999999999874 567779999753 355542210 01
Q ss_pred CCCCCCCeEEeceeeecCCCC--CCCCCCCCCCchhHHhh----------hcCCchHHHHHHHhhh----hccCChhHHH
Q psy16352 475 PGNNDTQVIYLPIIEFINPRP--PYLPLAIPEDLEPRLSR----------LHGDPIVWWIGQFLTF----LNNPTPNTRE 538 (905)
Q Consensus 475 ~~~~~~~vv~~pii~~~~~~~--~f~p~~vP~~l~~~L~~----------~h~~p~~Ww~gq~~~Y----LlRP~~~~~~ 538 (905)
+++--...+..|-++..+... .|. ..+-+..|.. ++.....|-..+-+.. -++|++++++
T Consensus 79 ~g~~fp~~w~~p~~~~~~~pd~qi~r----e~d~l~~lf~~~~d~~a~~vv~d~c~~~~c~~~aeR~if~slkpR~eIqa 154 (321)
T PF05830_consen 79 PGPFFPAWWNKPSIDCVYRPDEQIFR----ERDELRQLFQSQEDHEANTVVCDACLMWRCDEEAEREIFSSLKPRPEIQA 154 (321)
T ss_dssp -SSEESGGGGS-GGGGS---HHHHHH----HHHHHHHHHHSSS--S-SEEEE-S--TTSS-HHHHHHHHHHS-B-HHHHH
T ss_pred CCCcChhHHhCCCcceecCChHHHhh----hhHHHHHHhhcccccccchhhhHhhcCCcchhHHHHHHHHhCCCCHHHHH
Confidence 110000001112111111000 000 0011222221 1222346655533322 3599999999
Q ss_pred HHHHHhhhccCCCCcceeEEecCCCCC--cccccc-ChHHHHHHHHHHHHHHhccCCCCcceEEEEcCCHHHHHHHHhhC
Q psy16352 539 IVAKYGEKIKFQKPIVGIHIRRTDKVD--TEAALH-PVEEYMTGVEEYYKQLALTQTVDVKRVYVATDDASVLTEIREKY 615 (905)
Q Consensus 539 ~I~~~~~~l~f~~PiVGVHIRrgDK~~--~Ea~~~-~l~eYm~~ve~~~~~~~~~~~~~~~~IfLATDDp~Vi~e~k~~y 615 (905)
+|+...++..-+.++||||||+|.-.. .++.+. .-+.+|.+|...++....+.+....+||||||+++|+++++++|
T Consensus 155 rID~iy~ehf~g~~~IGVHVRhGngeD~~~h~~~~~D~e~~L~~V~~ai~~ak~~~~~k~~~IFLATDSaeVid~fr~~F 234 (321)
T PF05830_consen 155 RIDAIYREHFAGYSVIGVHVRHGNGEDIMDHAPYWADEERALRQVCTAIDKAKALAPPKPVRIFLATDSAEVIDQFRKKF 234 (321)
T ss_dssp HHHHHHHHHTTTSEEEEEEE---------------HHHHHHHHHHHHHHHHHHTS--SS-EEEEEEES-HHHHHHHHHHS
T ss_pred HHHHHHHHHcCCCceEEEEEeccCCcchhccCccccCchHHHHHHHHHHHHHHhccCCCCeeEEEecCcHHHHHHHHHHC
Confidence 999998886557889999999994421 133333 34458999998888765455556789999999999999999999
Q ss_pred CCcEEEcCCcccccc-cccccc-hhhhhhHHHHHHHHHhcCCeEEE-cccCcHhHHHHHHH
Q psy16352 616 PQYSVLGDPSIARTA-SLEHRY-LKSSLLGIITDLHYLSNCDHLVC-TFSSQICRTAYEQM 673 (905)
Q Consensus 616 p~y~~i~~~~~~~~a-~~~~R~-s~~~l~~~l~Dl~lLs~cD~~Vg-T~SSnv~RLa~eLr 673 (905)
|+...+...-.+..+ .+.... ..++..++|+||++||+||++|+ |.+|.+||++..++
T Consensus 235 Pdiiti~k~F~~~~~g~Lhs~~~g~~gg~~ALIDM~LLSrCD~LIr~~ptS~Fsr~asl~~ 295 (321)
T PF05830_consen 235 PDIITIPKQFPASQAGPLHSAAVGIEGGESALIDMYLLSRCDYLIRFPPTSAFSRYASLFV 295 (321)
T ss_dssp TTEE----------------HHHHHHHHHHHHHHHHHHTTSSEEEEESTT-GGGHHHHHH-
T ss_pred CCeEEcccccCCCCCCcCcccccccchHHHHHHHHHHHHhCCeEEEcCCCchhhhHHHHhc
Confidence 996444332111111 233221 23566789999999999999995 99999999999886
No 5
>KOG4348|consensus
Probab=99.87 E-value=1.2e-23 Score=229.05 Aligned_cols=123 Identities=18% Similarity=0.264 Sum_probs=108.5
Q ss_pred eeeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCcccccCC-------------------CC---
Q psy16352 739 HIAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSADS-------------------FP--- 796 (905)
Q Consensus 739 ~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~~~-------------------~p--- 796 (905)
++|.|+|.++.+|||+|++|++|.++.....||+.|. .+|+.|+||.++|+++. .+
T Consensus 4 ~ive~dy~a~hddelti~vgeii~nvkk~e~gw~ege--lngrrg~fpdnfV~eik~e~k~d~l~nk~~r~~l~q~~s~n 81 (627)
T KOG4348|consen 4 YIVEYDYDAVHDDELTIRVGEIIRNVKKLEEGWLEGE--LNGRRGQFPDNFVVEIKVEFKDDDLVNKLSRDSLVQMTSRN 81 (627)
T ss_pred eeeecccccccCceeeEeHHHHHHhhhhhccceeece--eccccccCCchhhhhhhhhcccccccccccccchhhcccCC
Confidence 5899999999999999999999999999999999997 68999999999988432 00
Q ss_pred ------------ChhhhhhhhheecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCceecccCC
Q psy16352 797 ------------AFAYIFRRIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVPHVETA 864 (905)
Q Consensus 797 ------------~~~~~~~~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~v~~~~ 864 (905)
..++..+++|.|+|.|.|+++|||+|+|||+|.+.++.++|||.|+. +|++||||+|||+++..+.
T Consensus 82 ~l~~~q~v~rtn~~~q~~~r~c~v~f~Y~pqndDELelkVGDiIeli~eVEeGWw~G~L--ngk~GmFPsNFVkel~~~s 159 (627)
T KOG4348|consen 82 PLTVHQQVERTNPPPQPQARICVVTFAYSPQNDDELELKVGDIIELISEVEEGWWKGKL--NGKVGMFPSNFVKELPTPS 159 (627)
T ss_pred CccccCcccccCCCCCccceeEEEEEeecCCCCceeeeeeccHHHhhhHhhhhhhhcee--cCcccccchhhceecCCCC
Confidence 02344578999999999999999999999999999999999999997 6999999999999887754
Q ss_pred C
Q psy16352 865 R 865 (905)
Q Consensus 865 ~ 865 (905)
.
T Consensus 160 d 160 (627)
T KOG4348|consen 160 D 160 (627)
T ss_pred c
Confidence 3
No 6
>KOG4348|consensus
Probab=99.86 E-value=5.9e-23 Score=223.56 Aligned_cols=175 Identities=17% Similarity=0.211 Sum_probs=136.3
Q ss_pred ecccccccccccCCCceeeeeehhhHhhhhccCCCCCCCee-ecc---c-----ccccC---------CC-cccceeeec
Q psy16352 683 RYRSLDDIYYFGVPTATIWCICRTAYEQMNAKFPDASDRYR-SLD---D-----IYYFG---------GQ-LSRIHIAVL 743 (905)
Q Consensus 683 ~~~slD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ld---~-----~~~~~---------~~-~~~~~~v~~ 743 (905)
.++.+|.-|+||+-|||-|.||-..+-..+.+|-|.+-... +.| . .+..+ +| ..+.++|.|
T Consensus 28 nvkk~e~gw~egelngrrg~fpdnfV~eik~e~k~d~l~nk~~r~~l~q~~s~n~l~~~q~v~rtn~~~q~~~r~c~v~f 107 (627)
T KOG4348|consen 28 NVKKLEEGWLEGELNGRRGQFPDNFVVEIKVEFKDDDLVNKLSRDSLVQMTSRNPLTVHQQVERTNPPPQPQARICVVTF 107 (627)
T ss_pred hhhhhccceeeceeccccccCCchhhhhhhhhcccccccccccccchhhcccCCCccccCcccccCCCCCccceeEEEEE
Confidence 44568999999999999999999999877777665432221 222 0 11111 11 244568999
Q ss_pred CCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCcccccCC-----------------------------
Q psy16352 744 PHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSADS----------------------------- 794 (905)
Q Consensus 744 ~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~~~----------------------------- 794 (905)
.|-++.+|||+|++||+|.+.+...+|||+|+. +|+.||||++||++..
T Consensus 108 ~Y~pqndDELelkVGDiIeli~eVEeGWw~G~L--ngk~GmFPsNFVkel~~~sde~~~aqd~~~S~stlagst~~~ps~ 185 (627)
T KOG4348|consen 108 AYSPQNDDELELKVGDIIELISEVEEGWWKGKL--NGKVGMFPSNFVKELPTPSDESAAAQDPAASASTLAGSTARTPSK 185 (627)
T ss_pred eecCCCCceeeeeeccHHHhhhHhhhhhhhcee--cCcccccchhhceecCCCCcchhhhcCcccchhhhcCcCCCCCcc
Confidence 999999999999999999999999999999984 5999999999998321
Q ss_pred ------------CC--------------------------------C----------h-------------hhhhhhhhe
Q psy16352 795 ------------FP--------------------------------A----------F-------------AYIFRRIHI 807 (905)
Q Consensus 795 ------------~p--------------------------------~----------~-------------~~~~~~~~~ 807 (905)
.| . . ..+...+|+
T Consensus 186 s~~SE~a~gsv~qPKkI~g~gfgdIfk~~pVklr~rt~~sete~~p~~~~i~~~l~asT~s~d~tktd~~~~tKtKeycr 265 (627)
T KOG4348|consen 186 SIGSEVAMGSVTQPKKIDGTGFGDIFKPAPVKLRLRTKFSETEKKPEKPFISSALSASTQSVDITKTDTAETTKTKEYCR 265 (627)
T ss_pred cccchhhcccccCcccccCCCcccccCCccceecccccccccccccccchhhhccCccccCccccccccccchhhhhhee
Confidence 00 0 0 012234799
Q ss_pred ecccCCCCCCCCccccCCCEEEEeeee--ecceecceecCCCceeeccCCCceecc
Q psy16352 808 AVLPHTPRHSSEMDLMVGDRISVAGNH--WNGYSKGRNLRTDQLALYPTFKSVPHV 861 (905)
Q Consensus 808 a~y~y~~~~~dEL~l~~GD~i~v~~~~--~dgw~~G~n~rtg~~GlfP~~~v~~v~ 861 (905)
++|.|.|+++|||.|+.||+|..+.+. +-|||.|.. +|+.|+||.|||+.|-
T Consensus 266 v~F~Ye~qndDELt~KEgdil~lItK~cgdaGWweGEL--nGk~GvFPDNFv~lv~ 319 (627)
T KOG4348|consen 266 VKFVYEPQNDDELTLKEGDILILITKNCGDAGWWEGEL--NGKKGVFPDNFVELVQ 319 (627)
T ss_pred eeeeecCCCccceeeccccEEEEecccccccceeeeee--cCccccCCchhhhhcC
Confidence 999999999999999999999987663 789999986 7999999999997554
No 7
>KOG1029|consensus
Probab=99.73 E-value=1.9e-18 Score=198.57 Aligned_cols=168 Identities=14% Similarity=0.111 Sum_probs=134.5
Q ss_pred cccccccccccCCCceeeeeehhhHhhh--hccCCCCCCCeeecccccccCCCcccceeeecCCCCCCCCCccccCCcEE
Q psy16352 684 YRSLDDIYYFGVPTATIWCICRTAYEQM--NAKFPDASDRYRSLDDIYYFGGQLSRIHIAVLPHTPRHSSEMALLVGDRI 761 (905)
Q Consensus 684 ~~slD~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ld~~~~~~~~~~~~~~v~~~~~~~~~~El~l~~GD~I 761 (905)
.-..|..|.-|--+++-||||-.||+.- |.-++.++.. ..-+.-++...|+-+|.+..+.-|+|.+|.+|
T Consensus 933 vtekdgeww~gt~~~r~gifPan~y~r~~~q~gs~Tp~k~--------g~~~kkpeiAqVia~yvAs~peQLsla~GqlI 1004 (1118)
T KOG1029|consen 933 VTEKDGEWWTGTCGDREGIFPANYYVRPKDQEGSGTPPKQ--------GPTPKKPEIAQVIADYVASGPEQLSLAPGQLI 1004 (1118)
T ss_pred EeeccCceeccccCCccccccccceeeehhccCCCCCCCC--------CCCCCCchhhhhhhhhhccCchhccccCccEE
Confidence 4567999999999999999999999842 2112222111 11122345668999999999999999999999
Q ss_pred EeccccccceeeeeecCCCce---eeeeCcccccCCC------CChhhhhhhhheecccCCCCCCCCccccCCCEEEEee
Q psy16352 762 SVAGNHWNGYSKGRNLRTDQL---ALYPTFKTSADSF------PAFAYIFRRIHIAVLPHTPRHSSEMDLMVGDRISVAG 832 (905)
Q Consensus 762 ~~~~~~~~G~~~G~n~~tg~~---GlfP~~~v~~~~~------p~~~~~~~~~~~a~y~y~~~~~dEL~l~~GD~i~v~~ 832 (905)
-+....-.|||.|+.++.||. |.||..||+-..+ |.. .+.-.+.|||+|.++++|||.++.||+|.|+.
T Consensus 1005 lIrkKn~sGWWeGELqarGkkrq~GWFPa~yVKvL~~~s~raTPa~--~~v~qviamYdY~AqndDELsF~kgdiI~Vln 1082 (1118)
T KOG1029|consen 1005 LIRKKNASGWWEGELQARGKKRQIGWFPAEYVKVLEPGSGRATPAT--RPVCQVIAMYDYEAQNDDELSFKKGDIINVLN 1082 (1118)
T ss_pred EEEecCCCccchhhHhhcCCccccccccHHHhhhccCCCCcCCCCC--CccceeEEeeccccCCcccccccCCCEEEecC
Confidence 999999999999999999976 9999999985432 221 11345689999999999999999999999999
Q ss_pred eeecceecceecCCCceeeccCCCceecccC
Q psy16352 833 NHWNGYSKGRNLRTDQLALYPTFKSVPHVET 863 (905)
Q Consensus 833 ~~~dgw~~G~n~rtg~~GlfP~~~v~~v~~~ 863 (905)
+.+-.||.|. ++|++||||+|||.+..++
T Consensus 1083 kdepeWW~Ge--~ng~sGLFPSNYV~k~ttd 1111 (1118)
T KOG1029|consen 1083 KDEPEWWSGE--RNGKSGLFPSNYVQKQTTD 1111 (1118)
T ss_pred CCChhhhccc--ccCccccCccccccccccC
Confidence 9999999995 5799999999999655443
No 8
>KOG4226|consensus
Probab=99.56 E-value=4.7e-15 Score=154.62 Aligned_cols=161 Identities=17% Similarity=0.263 Sum_probs=119.6
Q ss_pred ccccccCCCcccceeeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCcccccCC------CCC--
Q psy16352 726 DDIYYFGGQLSRIHIAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSADS------FPA-- 797 (905)
Q Consensus 726 d~~~~~~~~~~~~~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~~~------~p~-- 797 (905)
|.+|..+- ...|.|+|.|+..|||+|.+|+.|.|.....+|||+|. -+|..|.||++||.+.. .|.
T Consensus 101 d~~~~~~t----~AvVKf~Y~a~~eDELsLtKGtrv~vmEKssDGWWrG~--~ng~VGWFPSNYv~E~~ds~~gd~~s~~ 174 (379)
T KOG4226|consen 101 DRIYDLNT----PAVVKFNYVAEREDELSLTKGTRVTVMEKSSDGWWRGS--YNGQVGWFPSNYVTEEVDSAAGDSPSFL 174 (379)
T ss_pred chhhhcCC----ceEEEEeeccccccccccccCcEEEEEEeccCcceecc--cCCeeccccccceehhccccccCCccce
Confidence 55555443 24789999999999999999999999999999999997 58999999999988643 111
Q ss_pred ----hhh-------hhhhhheecccCCCCCCCCccccCCCEEEEeeee--ecceecceecCCCceeeccCCCceecccCC
Q psy16352 798 ----FAY-------IFRRIHIAVLPHTPRHSSEMDLMVGDRISVAGNH--WNGYSKGRNLRTDQLALYPTFKSVPHVETA 864 (905)
Q Consensus 798 ----~~~-------~~~~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~--~dgw~~G~n~rtg~~GlfP~~~v~~v~~~~ 864 (905)
+.. ..-..+.|||+|...++.||+++.||+++|.++- +-.||+-+|. .|++||.|.|||..+....
T Consensus 175 ~~~~~A~a~n~~~s~vl~vVvaLYsFsssndeELsFeKGerleivd~Pe~DPdWwkarn~-~G~vGLVPrNYv~vl~d~~ 253 (379)
T KOG4226|consen 175 SLRKAASASNGQGSRVLHVVVALYSFSSSNDEELSFEKGERLEIVDKPENDPDWWKARNA-RGQVGLVPRNYVVVLSDGP 253 (379)
T ss_pred ecchhhcccCCCCceEEEEEEEEecccCCChhhcccccCceeEeccCCCCCchHHhhccc-CCccceeecceEEEeccCc
Confidence 111 1124578999999999999999999999998764 5579999984 7999999999997554432
Q ss_pred CCCCCCCC--CCCCCCccc---chhccccccccc
Q psy16352 865 RFPTYPEV--PSRWPNVKK---AAFRQKSTKFGM 893 (905)
Q Consensus 865 ~~~~~~~~--~~~~~~~~~---~~~~~~~~~~~~ 893 (905)
.....+++ +.|.+.-++ |+|..+.=-||+
T Consensus 254 ~ts~~~~~s~~pq~sgn~p~~sg~~ag~~WYyG~ 287 (379)
T KOG4226|consen 254 STSKALHPSHAPQISGNGPSSSGRFAGRPWYYGN 287 (379)
T ss_pred cccccCCccccccccCCCCCccccccCCcceecc
Confidence 22112222 334333333 567777766775
No 9
>KOG4225|consensus
Probab=99.55 E-value=5.2e-15 Score=163.25 Aligned_cols=129 Identities=13% Similarity=0.196 Sum_probs=107.7
Q ss_pred CCcccceeeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCcccccCCC---------CChhhhhh
Q psy16352 733 GQLSRIHIAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSADSF---------PAFAYIFR 803 (905)
Q Consensus 733 ~~~~~~~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~~~~---------p~~~~~~~ 803 (905)
...-+.++|+|+|.+++..||+|++||+|.+...--.-|+.|+ ..|+.|+||.+||+.... |++.-...
T Consensus 227 ~~~~~~aralf~F~~qt~kEL~~~kGDIVyI~rkvD~nWyeGE--hhGr~GifP~sYvE~~~~~e~~qP~~~~P~q~~~~ 304 (489)
T KOG4225|consen 227 EKPKRAARALFDFEAQTPKELPFNKGDIVYILRKVDQNWYEGE--HHGRVGIFPASYVEILTPREKAQPARPPPQQVLEQ 304 (489)
T ss_pred ccccchhhheeccccCCccccccCCCCEEEEEeeccCceeeee--ecceecceechheeecCcccccCcCCCCccccccc
Confidence 3445567999999999999999999999999666555677776 679999999999996653 21111222
Q ss_pred hhheecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCceecccC
Q psy16352 804 RIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVPHVET 863 (905)
Q Consensus 804 ~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~v~~~ 863 (905)
--.+|.|+++++...||+|+.||+|.....++..|+.|.+.-||..|+||.+||+.+..+
T Consensus 305 g~a~A~y~F~~~s~~Els~~kge~v~L~r~vd~nw~eG~i~g~~rqgifP~SyVev~~~~ 364 (489)
T KOG4225|consen 305 GEAIAKYNFNADSPVELSLRKGERVTLTRQVDENWYEGKIPGTNRQGIFPASYVEVIKSP 364 (489)
T ss_pred ccccccCCCCCCCchhcccccCceEEEEEeccCceeeccccccccccccchhHhhhhhcc
Confidence 237899999999999999999999999999999999999999999999999999866554
No 10
>KOG1029|consensus
Probab=99.49 E-value=1.9e-14 Score=166.17 Aligned_cols=117 Identities=18% Similarity=0.233 Sum_probs=96.7
Q ss_pred eeecCCCCCCCCCccccCCcEEEecc--ccccceeeeeecCCCceeeeeCcccccCC--------------CC----C--
Q psy16352 740 IAVLPHTPRHSSEMALLVGDRISVAG--NHWNGYSKGRNLRTDQLALYPTFKTSADS--------------FP----A-- 797 (905)
Q Consensus 740 ~v~~~~~~~~~~El~l~~GD~I~~~~--~~~~G~~~G~n~~tg~~GlfP~~~v~~~~--------------~p----~-- 797 (905)
+|||+|++.+.|||++.+||+|.|.. +-.-||..|. ..|++|.||.+||+-+. +| +
T Consensus 697 rAly~FeaRs~dEisf~pGDII~V~esq~aEPGWlaGe--l~gktGWFPenyvEki~~~e~p~~v~Pv~~l~~~~~psas 774 (1118)
T KOG1029|consen 697 RALYPFEARSHDEISFEPGDIIIVFESQAAEPGWLAGE--LRGKTGWFPENYVEKIPAVETPGGVPPVQNLPPTMTPSAS 774 (1118)
T ss_pred eeecccccCCcccccccCCCEEEEehhccCCcccccce--eccccCcCcHHHHhhcccCCCCCCCCchhcCCCCCCcccc
Confidence 89999999999999999999999954 3456999998 56999999999887211 00 0
Q ss_pred ---------------------------------hhhhhhhhheecccCCCCCCCCccccCCCEEEEeeeeecceecceec
Q psy16352 798 ---------------------------------FAYIFRRIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNL 844 (905)
Q Consensus 798 ---------------------------------~~~~~~~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~ 844 (905)
-.......|.|+|+|.+..+.+|++..||+|.|+++. +-||.|.-
T Consensus 775 ~nq~a~~ad~~~~~~n~~~~t~~aA~p~~tapg~~eve~lq~iA~y~wrakke~dLsFskgd~I~Vlekq-emwW~G~v- 852 (1118)
T KOG1029|consen 775 VNQIAVVADTKNESANAMGLTEGAAPPALTAPGQGEVEILQAIALYPWRAKKENDLSFSKGDTITVLEKQ-EMWWFGEV- 852 (1118)
T ss_pred cccceeecccccchhhccCCCCCCCCccccCCCchhhhhhhHHhhccccccccccccccCCCeeeeehhc-cceecccc-
Confidence 0112234789999999999999999999999999998 88999965
Q ss_pred CCCceeeccCCCceecc
Q psy16352 845 RTDQLALYPTFKSVPHV 861 (905)
Q Consensus 845 rtg~~GlfP~~~v~~v~ 861 (905)
.|..|.||.+|||+|-
T Consensus 853 -~g~~GwFPksYVk~~~ 868 (1118)
T KOG1029|consen 853 -AGEIGWFPKSYVKEVG 868 (1118)
T ss_pred -cCccCcCcHHhhhhcc
Confidence 7999999999999653
No 11
>KOG4226|consensus
Probab=99.47 E-value=5.1e-14 Score=147.04 Aligned_cols=120 Identities=16% Similarity=0.278 Sum_probs=94.2
Q ss_pred eeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCcccccCC------------------------C
Q psy16352 740 IAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSADS------------------------F 795 (905)
Q Consensus 740 ~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~~~------------------------~ 795 (905)
+|.|+|.++...||+|++.+.+-+..+ .--||+..|- .+++|.+|+++|+... +
T Consensus 8 vak~dy~aq~~qeldikkner~~lldd-sk~wwrvrns-~n~tgyvpsnyverkn~~~~~si~knlkd~~g~kt~~k~s~ 85 (379)
T KOG4226|consen 8 VAKWDYTAQQDQELDIKKNERLWLLDD-SKTWWRVRNS-ANRTGYVPSNYVERKNSLKKGSIVKNLKDTLGLKTRRKTSA 85 (379)
T ss_pred EEEechhcccchhccccccceEEEEcC-Cccceeeecc-cccCCcccchhhhcccchhhhHHHHhhhhccccccccCCCc
Confidence 678999999999999999998876332 2345777764 5789999999988321 0
Q ss_pred --------------CChhhhhhhhheecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCceecc
Q psy16352 796 --------------PAFAYIFRRIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVPHV 861 (905)
Q Consensus 796 --------------p~~~~~~~~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~v~ 861 (905)
|++.....--..+-|+|.|+.+|||+|-.|+.|.|++++.||||+|.- +|+.|-||+|||.+..
T Consensus 86 ~~~~~sp~~d~~~ppd~~~~~~t~AvVKf~Y~a~~eDELsLtKGtrv~vmEKssDGWWrG~~--ng~VGWFPSNYv~E~~ 163 (379)
T KOG4226|consen 86 RDASPSPSTDAEYPPDRIYDLNTPAVVKFNYVAEREDELSLTKGTRVTVMEKSSDGWWRGSY--NGQVGWFPSNYVTEEV 163 (379)
T ss_pred cccCCCCCccccCCcchhhhcCCceEEEEeeccccccccccccCcEEEEEEeccCcceeccc--CCeeccccccceehhc
Confidence 111111112256789999999999999999999999999999999986 7999999999998765
Q ss_pred cC
Q psy16352 862 ET 863 (905)
Q Consensus 862 ~~ 863 (905)
..
T Consensus 164 ds 165 (379)
T KOG4226|consen 164 DS 165 (379)
T ss_pred cc
Confidence 54
No 12
>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A ....
Probab=99.38 E-value=2.3e-13 Score=110.38 Aligned_cols=49 Identities=27% Similarity=0.388 Sum_probs=45.4
Q ss_pred ecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCce
Q psy16352 808 AVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSV 858 (905)
Q Consensus 808 a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~ 858 (905)
|+|+|.|+.+|||+|++||+|.|.++.++|||.|+| +|+.|+||++||+
T Consensus 1 Al~~y~~~~~dELs~~~Gd~i~v~~~~~~~W~~g~~--~g~~G~~P~~yV~ 49 (49)
T PF14604_consen 1 ALYDYEAQDPDELSFKKGDVITVLEKSDDGWWYGRN--TGRTGLFPANYVE 49 (49)
T ss_dssp ESSCBCSSSTTB-EB-TTEEEEEEEESSTSEEEEEE--TTEEEEEEGGGEE
T ss_pred CCccCCCCCcCEeeEcCCCEEEEEEeCCCCEEEEEE--CCEEEEECHHhCC
Confidence 799999999999999999999999999999999997 9999999999985
No 13
>PF05830 NodZ: Nodulation protein Z (NodZ); InterPro: IPR008716 The nodulation genes of Rhizobia are regulated by the nodD gene product in response to host-produced flavonoids and appear to encode enzymes involved in the production of a lipo-chitose signal molecule required for infection and nodule formation. NodZ is required for the addition of a 2-O-methylfucose residue to the terminal reducing N-acetylglucosamine of the nodulation signal. This substitution is essential for the biological activity of this molecule. Mutations in nodZ result in defective nodulation. nodZ represents a unique nodulation gene that is not under the control of NodD and yet is essential for the synthesis of an active nodulation signal [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009312 oligosaccharide biosynthetic process, 0009877 nodulation; PDB: 3SIX_A 2HLH_A 2HHC_A 3SIW_A 2OCX_A.
Probab=99.24 E-value=3.4e-11 Score=129.76 Aligned_cols=194 Identities=21% Similarity=0.301 Sum_probs=104.7
Q ss_pred CeEEEEecCCccchhHHHHHHHHHHHHHhcCcEEEEcCCCCCCC----CCCcccccccCCC------CCCCCCCCCCCCC
Q psy16352 149 RKLVCELNKGCGYGCQLHHVVYCFIVAYATQRTLILDSKEWSYS----RGGWEEVFQPVSK------TCTSPEGVSNSSW 218 (905)
Q Consensus 149 k~L~c~~~~~cGfGc~lH~~~~cl~~A~~~nRtli~d~~~~~Y~----~~~w~~~F~P~S~------~C~~~~~~~~~~w 218 (905)
++++|. ..-|||--|-.++-|..+|-.|||+||+|+....|. .+-+.-+|+|+-+ .|.++-.
T Consensus 3 r~~~~r--~r~g~gd~l~~la~aw~~a~~~~r~l~idw~~s~~~~~~f~n~f~~ffepv~~i~~~~~~~~d~i~------ 74 (321)
T PF05830_consen 3 RFVVSR--RRTGLGDCLWSLAAAWRYAKRTGRTLVIDWRGSCYLDQPFTNAFPVFFEPVEDIAGVRVICDDRIN------ 74 (321)
T ss_dssp -EEEEE----S-HHHHHHHHHHHHHHHHHHT-EEEEE-BT-TT-SSTTSBSHHHHB---SEETTEEEE-SGGGG------
T ss_pred ceEEEe--ccCCchhHHHHHHHHHHHHHHhCCeEEEEcCCceecCCcccccCCcccchhhhhcCceeEecchhh------
Confidence 677877 578999999999999999999999999999999885 4677888888652 1211110
Q ss_pred CCCCCcceEEe--ccccccCCCCCCCCCCCC-cchhHH---Hh-hhcC------CC------chhHHHHH-HH---HHhC
Q psy16352 219 PGNNDTQVIYL--PIIEFINPRPPYLPLAIP-EDLEPR---LS-RLHG------DP------IVWWIGQF-LM---FLNN 275 (905)
Q Consensus 219 ~~~~~~~vv~~--pi~~~~~~~~~f~p~~~p-~~l~~~---l~-~~h~------~P------~~Ww~GQ~-~~---YL~R 275 (905)
-..+ |....-|.+|..--..-| ++++.+ |. .||. ++ .-|=-.|- -| =-++
T Consensus 75 -------~~~~~g~~fp~~w~~p~~~~~~~pd~qi~re~d~l~~lf~~~~d~~a~~vv~d~c~~~~c~~~aeR~if~slk 147 (321)
T PF05830_consen 75 -------QFSFPGPFFPAWWNKPSIDCVYRPDEQIFRERDELRQLFQSQEDHEANTVVCDACLMWRCDEEAEREIFSSLK 147 (321)
T ss_dssp -------T----SSEESGGGGS-GGGGS---HHHHHHHHHHHHHHHHSSS--S-SEEEE-S--TTSS-HHHHHHHHHHS-
T ss_pred -------hhcCCCCcChhHHhCCCcceecCChHHHhhhhHHHHHHhhcccccccchhhhHhhcCCcchhHHHHHHHHhCC
Confidence 0111 111001111111111112 222221 21 1222 11 23443332 22 2367
Q ss_pred CChhHHHHHHHHhhhcCCCCCeeeeeeeec---ccccccccCCChH-HHHHHHHHHHHHHhccCCCceeEEEEEecchhh
Q psy16352 276 PTPNTREIVAKYGEKIKFQKPIVGIHIRRT---DKVDTEAALHPVE-EYMTGVEEYYKQLALTQTVDVKRVYVATDDASV 351 (905)
Q Consensus 276 P~~~~~~~i~~~~~~l~f~~PiVgvHVRrt---DK~~~Ea~~~~le-eYM~~v~~~~~~~~~~~~~~~~ri~LaTDd~~v 351 (905)
|++++++.|+....+---.+++|||||||| |+.. ++.+..-+ .+|.+|...++....+......+||||||++.|
T Consensus 148 pR~eIqarID~iy~ehf~g~~~IGVHVRhGngeD~~~-h~~~~~D~e~~L~~V~~ai~~ak~~~~~k~~~IFLATDSaeV 226 (321)
T PF05830_consen 148 PRPEIQARIDAIYREHFAGYSVIGVHVRHGNGEDIMD-HAPYWADEERALRQVCTAIDKAKALAPPKPVRIFLATDSAEV 226 (321)
T ss_dssp B-HHHHHHHHHHHHHHTTTSEEEEEEE----------------HHHHHHHHHHHHHHHHHHTS--SS-EEEEEEES-HHH
T ss_pred CCHHHHHHHHHHHHHHcCCCceEEEEEeccCCcchhc-cCccccCchHHHHHHHHHHHHHHhccCCCCeeEEEecCcHHH
Confidence 999999999997777544678999999999 5553 55555444 599999999988766666667899999999999
Q ss_pred hhHHHHh
Q psy16352 352 LTEIREK 358 (905)
Q Consensus 352 i~Eakek 358 (905)
+++.+++
T Consensus 227 id~fr~~ 233 (321)
T PF05830_consen 227 IDQFRKK 233 (321)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999997
No 14
>PF03254 XG_FTase: Xyloglucan fucosyltransferase; InterPro: IPR004938 Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue []. ; GO: 0008107 galactoside 2-alpha-L-fucosyltransferase activity, 0042546 cell wall biogenesis, 0016020 membrane
Probab=99.18 E-value=2.7e-09 Score=122.35 Aligned_cols=151 Identities=15% Similarity=0.148 Sum_probs=103.7
Q ss_pred HHHHhhhhccCChhHHHHHHHHhhhc-cCCCCcceeEEecCCCCCccccccChHHHHHHHHHHHHHHh----c---c---
Q psy16352 522 IGQFLTFLNNPTPNTREIVAKYGEKI-KFQKPIVGIHIRRTDKVDTEAALHPVEEYMTGVEEYYKQLA----L---T--- 590 (905)
Q Consensus 522 ~gq~~~YLlRP~~~~~~~I~~~~~~l-~f~~PiVGVHIRrgDK~~~Ea~~~~l~eYm~~ve~~~~~~~----~---~--- 590 (905)
.-++.+|||+|+..+-..|....+.. .-..-.|||+||.-+... .+.+.+|+.|-+=..+-. . .
T Consensus 270 FhhL~RYLfhPsN~VW~~Itryy~ayLa~Ad~riGIQIRvf~~~~-----~~~~~~~dqIl~C~~~e~LLP~v~~~~~~~ 344 (476)
T PF03254_consen 270 FHHLGRYLFHPSNQVWGLITRYYDAYLAKADERIGIQIRVFDPKP-----GPFQHVLDQILSCTQQEKLLPEVVDTQEPA 344 (476)
T ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHccCcCceeEEEEEecCCCC-----CcchhHHHHHHHHHhhcccCCCcccccccc
Confidence 34888999999999999999987763 224567999999988653 356777777755322210 0 0
Q ss_pred -----CCCCcceEEEEcCCHHHHHHHHhhCCCcEEEcCCccc---ccccccccchh-hhhhHHHHHHHHHhcCCeEEEcc
Q psy16352 591 -----QTVDVKRVYVATDDASVLTEIREKYPQYSVLGDPSIA---RTASLEHRYLK-SSLLGIITDLHYLSNCDHLVCTF 661 (905)
Q Consensus 591 -----~~~~~~~IfLATDDp~Vi~e~k~~yp~y~~i~~~~~~---~~a~~~~R~s~-~~l~~~l~Dl~lLs~cD~~VgT~ 661 (905)
.....+.|+|++..+.-.++++..|-+.-..+...+. .+.....+... .--..+++||++||-||.+|-|.
T Consensus 345 ~~~~~~~~~~kaVlVtSL~~~yye~lr~~Y~~~~t~tGe~V~V~QpShe~~Q~~~~~~h~~kAlaEmyLLS~sD~LVTS~ 424 (476)
T PF03254_consen 345 ASSSSKSQKSKAVLVTSLYSEYYEKLRNMYWEHPTVTGEVVGVHQPSHEEYQQFGDNMHNQKALAEMYLLSLSDVLVTSG 424 (476)
T ss_pred ccccCCCCceEEEEEEeCCHHHHHHHHHHHhcCCCcCCcEEEEECCCCcccccccccchHHHHHHHHHHHHhccceEecC
Confidence 0124588999999999999999998653222211110 01111112111 11246999999999999999999
Q ss_pred cCcHhHHHHHHHhccC
Q psy16352 662 SSQICRTAYEQMNAKF 677 (905)
Q Consensus 662 SSnv~RLa~eLrqt~~ 677 (905)
.|++|.+|..|..-..
T Consensus 425 ~STFGYVAqgLgGl~P 440 (476)
T PF03254_consen 425 WSTFGYVAQGLGGLRP 440 (476)
T ss_pred CCCchhHHHhhcCCCc
Confidence 9999999999976665
No 15
>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A ....
Probab=99.09 E-value=8.6e-11 Score=95.36 Aligned_cols=49 Identities=27% Similarity=0.408 Sum_probs=44.7
Q ss_pred eecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCcccc
Q psy16352 741 AVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTS 791 (905)
Q Consensus 741 v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~ 791 (905)
|+|+|.|+.++||+|++||+|.|.....+||+.|+| +|+.|+||++||+
T Consensus 1 Al~~y~~~~~dELs~~~Gd~i~v~~~~~~~W~~g~~--~g~~G~~P~~yV~ 49 (49)
T PF14604_consen 1 ALYDYEAQDPDELSFKKGDVITVLEKSDDGWWYGRN--TGRTGLFPANYVE 49 (49)
T ss_dssp ESSCBCSSSTTB-EB-TTEEEEEEEESSTSEEEEEE--TTEEEEEEGGGEE
T ss_pred CCccCCCCCcCEeeEcCCCEEEEEEeCCCCEEEEEE--CCEEEEECHHhCC
Confidence 799999999999999999999999889999999997 9999999999985
No 16
>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....
Probab=99.08 E-value=7.3e-11 Score=95.12 Aligned_cols=48 Identities=25% Similarity=0.299 Sum_probs=45.7
Q ss_pred eecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccC
Q psy16352 807 IAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPT 854 (905)
Q Consensus 807 ~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~ 854 (905)
+|+|+|.++.++||+|+.||+|.|++..++|||.|.+.+||+.|+||+
T Consensus 1 ~Alydf~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~~~~G~vP~ 48 (48)
T PF00018_consen 1 RALYDFDAEDPDELSFKKGDIIEVLEKSDDGWWKVRNESTGKEGWVPS 48 (48)
T ss_dssp EESSCBETSSTTBSEB-TTEEEEEEEESSSSEEEEEETTTTEEEEEEG
T ss_pred CCCeeeCCCCCCEEeEECCCEEEEEEecCCCEEEEEECCCCcEEEeeC
Confidence 599999999999999999999999999999999999999999999996
No 17
>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....
Probab=99.01 E-value=1.6e-10 Score=95.82 Aligned_cols=53 Identities=19% Similarity=0.256 Sum_probs=48.0
Q ss_pred heecccCCCCCCCCccccCCCEEEEe-eeeecceecceecCCCceeeccCCCceec
Q psy16352 806 HIAVLPHTPRHSSEMDLMVGDRISVA-GNHWNGYSKGRNLRTDQLALYPTFKSVPH 860 (905)
Q Consensus 806 ~~a~y~y~~~~~dEL~l~~GD~i~v~-~~~~dgw~~G~n~rtg~~GlfP~~~v~~v 860 (905)
++|+++|.++.++||+|++||+|.|. ++.++|||.|.+ +|+.|+||++||+++
T Consensus 2 ~~a~~d~~~~~~~~Ls~~~Gd~i~v~~~~~~~~ww~~~~--~g~~G~~P~~~v~~~ 55 (55)
T PF07653_consen 2 YRAIFDYVAEDPDELSFKKGDVIEVLGEKDDDGWWLGEN--NGRRGWFPSSYVEEI 55 (55)
T ss_dssp EEESSSBESSSTTB-EB-TTEEEEEEEEECSTSEEEEEE--TTEEEEEEGGGEEEH
T ss_pred EEEeEEECCCCCCceEEecCCEEEEEEeecCCCEEEEEE--CCcEEEEcHHHEEEC
Confidence 68999999999999999999999999 888899999998 899999999999863
No 18
>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats. Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.
Probab=98.95 E-value=2.1e-09 Score=120.63 Aligned_cols=140 Identities=16% Similarity=0.210 Sum_probs=76.4
Q ss_pred hhhccCChhHHHHHHHHhhhcc-CCCCcceeEEecC-CCC---------------------------Cc-cccccChHHH
Q psy16352 527 TFLNNPTPNTREIVAKYGEKIK-FQKPIVGIHIRRT-DKV---------------------------DT-EAALHPVEEY 576 (905)
Q Consensus 527 ~YLlRP~~~~~~~I~~~~~~l~-f~~PiVGVHIRrg-DK~---------------------------~~-Ea~~~~l~eY 576 (905)
+..+|+++.+++..++..+++. -..|.||||+|+| |-. .. +..+-..++.
T Consensus 170 ~r~l~~~~~i~~~a~~~i~~~~~~~~~yiavHlR~~~D~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 249 (351)
T PF10250_consen 170 QRYLRFSPEIRELADKFIKRLLAGGGPYIAVHLRRGKDWFSACEFKGERHLLASPRCWGKKSINPEKKRRNGCCPSTPQE 249 (351)
T ss_dssp GGG--B-HHHHHHHHHHHHHH----SSEEEEEE--SHHHHHHHCT-T----TTTHHHH-GGGTT-----HHHHS--HHHH
T ss_pred eEEEecCHHHHHHHHHHHHHhhcccCceEEEeecccCchHhhcccCCchHHHHHhHhhccccccchhhhhcCCCCChHHH
Confidence 4478999999999999998875 4799999999999 760 00 1111122233
Q ss_pred HHHHHHHHHHHhccCCCCcceEEEEcCCH----HHHHHHHhhCCCcEEEcCCcccccccccccchhhhhhHHHHHHHHHh
Q psy16352 577 MTGVEEYYKQLALTQTVDVKRVYVATDDA----SVLTEIREKYPQYSVLGDPSIARTASLEHRYLKSSLLGIITDLHYLS 652 (905)
Q Consensus 577 m~~ve~~~~~~~~~~~~~~~~IfLATDDp----~Vi~e~k~~yp~y~~i~~~~~~~~a~~~~R~s~~~l~~~l~Dl~lLs 652 (905)
+..+.+.... ...+.||||||+. ..++.+++.+|+.. ..........+ .+. .+-.-+++|.++++
T Consensus 250 ~~~i~~~~~~------~~~~~vYiAtd~~~~~~~~l~~l~~~~~~~~--~~~~~~~~~~~-~~~--~~~~~a~vD~~i~~ 318 (351)
T PF10250_consen 250 AKQILRALGK------NNTTVVYIATDEIYGGERRLDPLKNMFPNVV--TKDDLLSHEEL-EPL--NDDQLAMVDQEICS 318 (351)
T ss_dssp HHHHHHHHHH------HT-SEEEEEESS-----------HHHHHHHH--GGGT--EE--S--------S--HHHHHHHHH
T ss_pred HHHHHHHhcc------CCCCEEEEecCcccccchhHHHHHHHhhhhE--eccccCCHHHh-hhc--cccchhHHHHHHHh
Confidence 3333332222 2458999999993 24456666666531 11100000001 011 11345899999999
Q ss_pred cCCeEEEcccCcHhHHHHHHHhccC
Q psy16352 653 NCDHLVCTFSSQICRTAYEQMNAKF 677 (905)
Q Consensus 653 ~cD~~VgT~SSnv~RLa~eLrqt~~ 677 (905)
+||+||||..|+|+..+...|...+
T Consensus 319 ~s~~Figt~~Stfs~~i~~~R~~~g 343 (351)
T PF10250_consen 319 RSDVFIGTCGSTFSSNIARERHYRG 343 (351)
T ss_dssp HSSEEEE-TT-HHHHHHHHHHHHSS
T ss_pred cCCEEEecCcchhHHHhhcccCcCC
Confidence 9999999999999999999998876
No 19
>PF01531 Glyco_transf_11: Glycosyl transferase family 11; InterPro: IPR002516 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 11 GT11 from CAZY comprises enzymes with only one known activity; galactoside 2-L-fucosyltransferase (2.4.1.69 from EC). Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 2-L-fucosyltransferase 1 (2.4.1.69 from EC) and Galactoside 2-L-fucosyltransferase 2 (2.4.1.69 from EC) belong to the Hh blood group system and are associated with H/h and Se/se antigens.; GO: 0008107 galactoside 2-alpha-L-fucosyltransferase activity, 0005975 carbohydrate metabolic process, 0016020 membrane
Probab=98.91 E-value=6.7e-09 Score=114.85 Aligned_cols=227 Identities=16% Similarity=0.189 Sum_probs=122.1
Q ss_pred ceEEEeccCCcchHHHHHHHHHHHHHHHHcCcEEEEecCCCcccCCCCccccccCCCCCCCCCCCCCCCCCCCCCCCeEE
Q psy16352 405 RKLVCELNKGCGYGCQLHHVVYCFIVAYATRRTLILDSKEWSYSRGGWEEVFQPVSKTCTSPEGVSNSGWPGNNDTQVIY 484 (905)
Q Consensus 405 K~Lvc~l~~~~GfG~~lh~l~~cL~lA~~t~RtLivd~~~w~Y~~~gw~~~F~P~S~~C~~~~~~~~~~W~~~~~~~vv~ 484 (905)
+.+.+.+...+|||++|..++..+.+|...+++.++......+..+ +...+.-... . ......|... . +.
T Consensus 29 ~~~~~~i~~~g~LGNqmfqya~l~~lak~~~~~~~i~~~~~~~l~~-~~~~~~~~~~-~----~~~~~~~~~~---~-~~ 98 (298)
T PF01531_consen 29 KYLMSTINLNGRLGNQMFQYASLYGLAKLNGRTAFIPISMHRYLHP-FRITLPILNE-S----FPIRIPWINY---F-LK 98 (298)
T ss_pred ccceEEEEEcchHHHHHhHHHHHHHHHHhcCCccccchHHHHHhhh-hhhcccccch-h----hhhhhhhhhh---h-HH
Confidence 4666777779999999999999999998888887776533333222 3222211110 0 0000011000 0 00
Q ss_pred eceeeecCCCCCCCCCCCCCCchhHHhhhc-CCc-hHHHHHHHhhhhccCChhHHHHHHHHhhhcc-----CCCCcceeE
Q psy16352 485 LPIIEFINPRPPYLPLAIPEDLEPRLSRLH-GDP-IVWWIGQFLTFLNNPTPNTREIVAKYGEKIK-----FQKPIVGIH 557 (905)
Q Consensus 485 ~pii~~~~~~~~f~p~~vP~~l~~~L~~~h-~~p-~~Ww~gq~~~YLlRP~~~~~~~I~~~~~~l~-----f~~PiVGVH 557 (905)
. .. ...+. .++..... ...+. +.. +..-.-|..+|.....+.+++.+....+++. -....||||
T Consensus 99 ~-~~-----~~~~~--~~~~~~~~-~~~~~~~~~~y~~Gy~q~~~~f~~~~~~l~~~~~~~~~~~~~~~~~~~~~~V~VH 169 (298)
T PF01531_consen 99 C-FM-----KKNYF--ILKNEYFR-FLGYPNSKNYYLHGYFQSIKYFFDIKDELREEFKEFLRELNLEIIIKNSNSVCVH 169 (298)
T ss_pred H-Hh-----hcccc--ccccccch-hhcccCcCCeEEEeeccCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEE
Confidence 0 00 00000 00000000 00000 000 0000114556666666667666665443332 246789999
Q ss_pred EecCCCCCccc--cccC--hHHHHHHHHHHHHHHhccCCCCcceEEEEcCCHHHHHHH-HhhCCCcEEEcCCcccccccc
Q psy16352 558 IRRTDKVDTEA--ALHP--VEEYMTGVEEYYKQLALTQTVDVKRVYVATDDASVLTEI-REKYPQYSVLGDPSIARTASL 632 (905)
Q Consensus 558 IRrgDK~~~Ea--~~~~--l~eYm~~ve~~~~~~~~~~~~~~~~IfLATDDp~Vi~e~-k~~yp~y~~i~~~~~~~~a~~ 632 (905)
|||||-+.... ..+. -.+|+..+-+++.+. .....+|+.|||++-.++. ....+...+..+
T Consensus 170 IRRGDy~~~~~~~~~~~~~~~~Yy~~Ai~~i~~~-----~~~~~f~ifSDD~~w~k~~l~~~~~~~~~~~~--------- 235 (298)
T PF01531_consen 170 IRRGDYVSNGNHNWKHGICDKDYYKKAIEYIREK-----VKNPKFFIFSDDIEWCKENLKFSNGDVYFSGN--------- 235 (298)
T ss_pred EEchhccccccccccCCCCCHHHHHHHHHHHHHh-----CCCCEEEEEcCCHHHHHHHHhhcCCcEEEECC---------
Confidence 99999874221 1222 235665555555432 2456899999999877653 322222212211
Q ss_pred cccchhhhhhHHHHHHHHHhcCCeEEEcccCcHhHHHHHHHh
Q psy16352 633 EHRYLKSSLLGIITDLHYLSNCDHLVCTFSSQICRTAYEQMN 674 (905)
Q Consensus 633 ~~R~s~~~l~~~l~Dl~lLs~cD~~VgT~SSnv~RLa~eLrq 674 (905)
.....||++|+.||++|.| .|++|--++-|-.
T Consensus 236 ---------~~~~~Dl~lms~C~~~Iis-nSTFswW~a~L~~ 267 (298)
T PF01531_consen 236 ---------NSPYEDLYLMSQCKHFIIS-NSTFSWWAAYLSK 267 (298)
T ss_pred ---------CCHHHHHHHHHhCCcEEEC-CChHHHHHHHHCC
Confidence 3477899999999999999 7999999999954
No 20
>KOG1118|consensus
Probab=98.87 E-value=7.9e-10 Score=118.06 Aligned_cols=59 Identities=15% Similarity=0.238 Sum_probs=54.0
Q ss_pred hhhhhhheecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCceec
Q psy16352 800 YIFRRIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVPH 860 (905)
Q Consensus 800 ~~~~~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~v 860 (905)
...+..|+|+|+|.|++++||.|+.||+|+|...++++||.|.- .|.+|+||.|||..+
T Consensus 303 ~~~~p~cralYdFepenEgEL~fkeGDlI~l~~QIdenWyeG~~--~g~sG~FPvnYv~vl 361 (366)
T KOG1118|consen 303 QMDQPCCRALYDFEPENEGELDFKEGDLITLTNQIDENWYEGEK--HGESGMFPVNYVEVL 361 (366)
T ss_pred cccchhheeeeccCCCCCCccCcccCceeeehhhcCcchhhhee--cCccCccccceeEEe
Confidence 34566899999999999999999999999999999999999976 699999999999754
No 21
>smart00326 SH3 Src homology 3 domains. Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.
Probab=98.85 E-value=2e-09 Score=87.87 Aligned_cols=55 Identities=25% Similarity=0.286 Sum_probs=50.9
Q ss_pred hhheecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCcee
Q psy16352 804 RIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVP 859 (905)
Q Consensus 804 ~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~ 859 (905)
..++|+|+|.+..++||+|++||+|.|.+..++|||.|++.+ |+.|+||++||+.
T Consensus 3 ~~~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~~~w~~~~~~~-~~~G~vP~~~v~~ 57 (58)
T smart00326 3 PQVRALYDYTAQDPDELSFKKGDIITVLEKSDDGWWKGRLGR-GKEGLFPSNYVEE 57 (58)
T ss_pred cEEEEeeeeCCCCCCCCCCCCCCEEEEEEcCCCCeEEEEeCC-CCEEEEchHHEEE
Confidence 356899999999999999999999999999899999999866 9999999999975
No 22
>KOG3775|consensus
Probab=98.83 E-value=1.4e-09 Score=118.59 Aligned_cols=70 Identities=26% Similarity=0.346 Sum_probs=62.7
Q ss_pred hhhhhhhheecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCceecccCCCCCC
Q psy16352 799 AYIFRRIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVPHVETARFPT 868 (905)
Q Consensus 799 ~~~~~~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~v~~~~~~~~ 868 (905)
......++||++.|.|++.|||+|++||-|.|..+.+|-|+.|+|+|||+.|+||++|+-+|.-++..++
T Consensus 258 ~e~qe~THR~~~rFvPRHpDELeLEIgDav~Ve~eadD~W~~G~NlRTG~~GIFPA~ya~evd~~eed~l 327 (482)
T KOG3775|consen 258 GEEQEQTHRAVFRFVPRHPDELELEIGDAVLVEAEADDFWFEGFNLRTGERGIFPAFYAHEVDGPEEDLL 327 (482)
T ss_pred hhhhchhhhhhhhccCCCcceeeeecCCeeEeeecccchhhccccccccccccccceeEEecCCchhhhh
Confidence 3445678999999999999999999999999999999999999999999999999999988876655443
No 23
>KOG2199|consensus
Probab=98.82 E-value=1.1e-09 Score=120.50 Aligned_cols=59 Identities=20% Similarity=0.289 Sum_probs=55.6
Q ss_pred hhhhhheecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCceecc
Q psy16352 801 IFRRIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVPHV 861 (905)
Q Consensus 801 ~~~~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~v~ 861 (905)
...|.+||||+|.+..++||+++.||||.|++..+-.||+|.| .+..||||+|||..++
T Consensus 213 ~~~rkVRALYDFeAaE~nELsFkaGdIItVLd~s~~~WWKG~~--~~~~GlFPsnfVT~~l 271 (462)
T KOG2199|consen 213 TVVRKVRALYDFEAAEDNELSFKAGDIITVLDDSDPNWWKGEN--HRGIGLFPSNFVTADL 271 (462)
T ss_pred ccchhhhhhhcccccCCCccceecCcEEEEcccCCcchhcccc--CCcccccchhhhhhhh
Confidence 5568899999999999999999999999999999999999999 4789999999999888
No 24
>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies.
Probab=98.81 E-value=3.8e-09 Score=85.22 Aligned_cols=52 Identities=25% Similarity=0.321 Sum_probs=48.7
Q ss_pred heecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCce
Q psy16352 806 HIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSV 858 (905)
Q Consensus 806 ~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~ 858 (905)
++|+|+|.++.++||+|++||+|.|.+..++|||.|.+.++ +.|+||++||+
T Consensus 2 ~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~~~w~~~~~~~~-~~G~vP~~~v~ 53 (54)
T cd00174 2 VRALYDYDARDPDELSFKKGDIIEVLEKSDDGWWEGRLLGG-KRGLFPSNYVE 53 (54)
T ss_pred EEEEEeeCCCCCCCCCCCCCCEEEEEEcCCCCeEEEEECCC-CEEEEccccCc
Confidence 57999999999999999999999999998899999998766 99999999985
No 25
>KOG2996|consensus
Probab=98.80 E-value=3.3e-09 Score=120.60 Aligned_cols=52 Identities=19% Similarity=0.298 Sum_probs=47.1
Q ss_pred heecccCCCCCCCCccccCCCEEEEeeee--ecceecceecCCCceeeccCCCcee
Q psy16352 806 HIAVLPHTPRHSSEMDLMVGDRISVAGNH--WNGYSKGRNLRTDQLALYPTFKSVP 859 (905)
Q Consensus 806 ~~a~y~y~~~~~dEL~l~~GD~i~v~~~~--~dgw~~G~n~rtg~~GlfP~~~v~~ 859 (905)
..|-|++.+++-.||+|+.||+|.+..++ +.|||+|.- +|+.|.||++||++
T Consensus 808 AvarYdf~ard~~eLSlk~GDvV~i~~k~g~d~GWWkGev--ngrvGwFPstYVee 861 (865)
T KOG2996|consen 808 AVARYDFCARDMRELSLKEGDVVKIYDKVGEDQGWWKGEV--NGRVGWFPSTYVEE 861 (865)
T ss_pred eeeccccCCCchhhcccccCCEEEEehhccccCceeccee--cCcccccccccccc
Confidence 47889999999999999999999998876 579999975 69999999999975
No 26
>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....
Probab=98.77 E-value=6.4e-09 Score=83.80 Aligned_cols=48 Identities=25% Similarity=0.298 Sum_probs=44.8
Q ss_pred eeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeC
Q psy16352 740 IAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPT 787 (905)
Q Consensus 740 ~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~ 787 (905)
+|+|+|+++.++||+|+.||+|.|.....+||+.|.+.+||+.|+||+
T Consensus 1 ~Alydf~~~~~~eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~~~~G~vP~ 48 (48)
T PF00018_consen 1 RALYDFDAEDPDELSFKKGDIIEVLEKSDDGWWKVRNESTGKEGWVPS 48 (48)
T ss_dssp EESSCBETSSTTBSEB-TTEEEEEEEESSSSEEEEEETTTTEEEEEEG
T ss_pred CCCeeeCCCCCCEEeEECCCEEEEEEecCCCEEEEEECCCCcEEEeeC
Confidence 699999999999999999999999888888999999999999999996
No 27
>KOG3632|consensus
Probab=98.74 E-value=8.9e-09 Score=122.71 Aligned_cols=123 Identities=23% Similarity=0.325 Sum_probs=97.4
Q ss_pred CCcccceeeecCCCCC--------CCCCccccCCcEEEeccc-cccceeeeeecCCCceeeeeCcccccCC---------
Q psy16352 733 GQLSRIHIAVLPHTPR--------HSSEMALLVGDRISVAGN-HWNGYSKGRNLRTDQLALYPTFKTSADS--------- 794 (905)
Q Consensus 733 ~~~~~~~~v~~~~~~~--------~~~El~l~~GD~I~~~~~-~~~G~~~G~n~~tg~~GlfP~~~v~~~~--------- 794 (905)
.++.+.-+|+|||++. ...||.++.|+||.|-|+ .-+||+.|+ .+|+.|++|.++|.+..
T Consensus 1135 ~lparifVAlfDYDpl~MSpNpDAaEeELpFregqIikV~GDkDadgFY~GE--~ngr~GlIPcNmvae~~vd~eq~~~r 1212 (1335)
T KOG3632|consen 1135 ALPARIFVALFDYDPLQMSPNPDAAEEELPFREGQIIKVLGDKDADGFYMGE--LNGRRGLIPCNMVAEQPVDNEQTDRR 1212 (1335)
T ss_pred cCcceeeEeeeccCccccCCCCChhhhccccccCcEEEEeccccccceeecc--cccccccccccccccccCCcHHHHHH
Confidence 3456677899999986 368999999999999887 679999998 68999999999998643
Q ss_pred -----CCC-----------hh-------hhhhhhheecccCCCCC-------CCCccccCCCEEEEeeeeecc-eeccee
Q psy16352 795 -----FPA-----------FA-------YIFRRIHIAVLPHTPRH-------SSEMDLMVGDRISVAGNHWNG-YSKGRN 843 (905)
Q Consensus 795 -----~p~-----------~~-------~~~~~~~~a~y~y~~~~-------~dEL~l~~GD~i~v~~~~~dg-w~~G~n 843 (905)
.|. ++ ....+.+.|.|+|.|+. +.||.++.||||.|..+++|| .|.|..
T Consensus 1213 ~rqG~lPsv~~~e~~~gs~~s~g~~k~vp~~p~~mvaa~dydpqeSSpg~dgeAelafraGdIitVfg~mdddgfyyGel 1292 (1335)
T KOG3632|consen 1213 WRQGLLPSVPTEEMRKGSAFSDGQQKMVPWPPRQMVAASDYDPQESSPGLDGEAELAFRAGDIITVFGKMDDDGFYYGEL 1292 (1335)
T ss_pred HHhccCCCCCchhhhcccccCCCCccccCCchhhhhhhhcCCcccCCCCcccceeeccccCCeEEeeccccCCccccccc
Confidence 121 00 11235678999999984 468999999999999998654 466654
Q ss_pred cCCCceeeccCCCcee
Q psy16352 844 LRTDQLALYPTFKSVP 859 (905)
Q Consensus 844 ~rtg~~GlfP~~~v~~ 859 (905)
+|+.|+.|+||...
T Consensus 1293 --ngqkglvpsnfle~ 1306 (1335)
T KOG3632|consen 1293 --NGQKGLVPSNFLEA 1306 (1335)
T ss_pred --CCccCccccccccC
Confidence 59999999999853
No 28
>KOG0162|consensus
Probab=98.58 E-value=2.8e-08 Score=115.59 Aligned_cols=55 Identities=16% Similarity=0.229 Sum_probs=51.9
Q ss_pred hhhheecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCcee
Q psy16352 803 RRIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVP 859 (905)
Q Consensus 803 ~~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~ 859 (905)
.-.|+|+|+|..++.|||+|++||+|.+..+.-.|||.|.. .|+.|+||++||++
T Consensus 1051 ~p~~~A~Y~y~gq~~dEls~~~~diIei~~edpSGWw~gk~--~~keG~~P~~Yv~~ 1105 (1106)
T KOG0162|consen 1051 NPVCEALYDYPGQDVDELSFKKGDIIEIMREDPSGWWLGKL--NGKEGLFPGNYVTE 1105 (1106)
T ss_pred CcceeeeccCCCCCcccccccCCCEEEEeccCCCcchhhcc--CCcccccccccccc
Confidence 35799999999999999999999999999999999999985 79999999999986
No 29
>KOG3601|consensus
Probab=98.57 E-value=2e-08 Score=102.99 Aligned_cols=145 Identities=12% Similarity=0.050 Sum_probs=111.1
Q ss_pred cccccccCCCceeeeeehhhHhhhhccCCCCCCCeeecccccccCCCcccceeeecCCCCCCCCCccccCCcEEEecccc
Q psy16352 688 DDIYYFGVPTATIWCICRTAYEQMNAKFPDASDRYRSLDDIYYFGGQLSRIHIAVLPHTPRHSSEMALLVGDRISVAGNH 767 (905)
Q Consensus 688 D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~~~~~~~~v~~~~~~~~~~El~l~~GD~I~~~~~~ 767 (905)
|.|||-.|-.|-=|.+|+.|.+- .+.+ |+ .+.|+.......-+.++.||.|......
T Consensus 33 ~~nw~~ael~g~~g~~P~Nai~~------------~~~~--wv---------e~~i~r~~ae~~l~~~~~G~fl~r~s~s 89 (222)
T KOG3601|consen 33 DINWYKAELDGPEGFIPKNAIRM------------KPHE--WV---------EGLIPRPLAEDLLSKKRDGDFLIRLSES 89 (222)
T ss_pred hhhhhhHhhcCccccCccccccc------------cccc--ce---------ecccccchhhhhhhccCcchhhhhhhhc
Confidence 45899999999888887777642 1222 22 3456666665666778999999888777
Q ss_pred ccceeeeeecCCCceeeeeCcccccCC---------------CCC-------------------------hhhhhhhhhe
Q psy16352 768 WNGYSKGRNLRTDQLALYPTFKTSADS---------------FPA-------------------------FAYIFRRIHI 807 (905)
Q Consensus 768 ~~G~~~G~n~~tg~~GlfP~~~v~~~~---------------~p~-------------------------~~~~~~~~~~ 807 (905)
.=||+.|. -.++.|++|-.+|++-. +|+ .+.....+++
T Consensus 90 SPg~fsgs--vr~~d~vqhfkvvrpa~~k~~lw~skfnslnplv~Y~rt~s~~r~~qi~l~d~~~~~~~~~~~~~~~yqQ 167 (222)
T KOG3601|consen 90 SPGDFSGS--VRFPDGVQHFKVVRPAFGKYFLWSSKFNSLNPLVSYHRTASQSRNQQIFLRDMEPPPAPLPPAPTNYYQQ 167 (222)
T ss_pred Cccccccc--ccCCCCceeccccccCccccccchhhccCCCCCcccCcccccccceeeeecccccccccCCCCccchhhh
Confidence 77888876 45678999987776321 111 1224467899
Q ss_pred ecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCcee
Q psy16352 808 AVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVP 859 (905)
Q Consensus 808 a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~ 859 (905)
|+|++.|+.++||..+.||.|+|....+.-||.|.. .|+.|+||++||.+
T Consensus 168 a~~df~~~pp~ql~f~~gq~~~v~~~ss~~ww~Gs~--lg~agiFpagyv~p 217 (222)
T KOG3601|consen 168 ALYDFQPQPPGQLAFRRGQQIQVLDSSSPFWWFGSK--LGRAGIFPAGYVAP 217 (222)
T ss_pred hcCCCCCCCchhhccccCCcceeecCCCcchhhccc--cCceeeecCccccc
Confidence 999999999999999999999999999999999987 59999999999954
No 30
>KOG4792|consensus
Probab=98.54 E-value=7.7e-08 Score=99.19 Aligned_cols=116 Identities=15% Similarity=0.255 Sum_probs=92.1
Q ss_pred eeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCcccccCC-----------------CC------
Q psy16352 740 IAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSADS-----------------FP------ 796 (905)
Q Consensus 740 ~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~~~-----------------~p------ 796 (905)
+++|+|+.++.++|.++.||++.+.....+-||..+| ..|+.||.|..||+-.. .|
T Consensus 128 r~~fdF~G~deeDLPFkkGeiL~I~~K~eeqWW~Arn-s~Gk~GmIPvpYVe~~~~~~~~~~~~~~ga~e~si~q~~~g~ 206 (293)
T KOG4792|consen 128 RALFDFNGNDEEDLPFKKGEILRIRDKPEEQWWNARN-SEGKRGMIPVPYVEKYRPASASVSALIGGASESSIPQSGGGA 206 (293)
T ss_pred eeeeccCCCccccCCcccCcEEEEecCcHHHhhhhhc-cCCcccceechHHHhhhhhhcccccccCCcccccCCCCCCCC
Confidence 5799999999999999999999998887778887776 57999999998887210 11
Q ss_pred -Chh-------------hhhhhhheecccCCCC--CCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCce
Q psy16352 797 -AFA-------------YIFRRIHIAVLPHTPR--HSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSV 858 (905)
Q Consensus 797 -~~~-------------~~~~~~~~a~y~y~~~--~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~ 858 (905)
..+ ..-.-+.+|+..=.|. +..-|.|++||+|.|.+..-+|=|.|.. +|+.|.||=.+|+
T Consensus 207 e~~s~a~~s~~~~l~l~~~lPa~Arv~q~RVPnAYDkTaL~levGdiVkVTk~ninGqwegEl--nGk~G~fPfThvr 282 (293)
T KOG4792|consen 207 ERFSSASTSSDTPLPLQQNLPAYARVIQKRVPNAYDKTALALEVGDIVKVTKKNINGQWEGEL--NGKIGHFPFTHVR 282 (293)
T ss_pred CCCCCCCcccCCcCccccCCChheeeehhcCCCccChhhhhhhcCcEEEEEeeccCceeeeee--cCccccccceeEE
Confidence 000 0011246777777777 4455999999999999999999999986 7999999999996
No 31
>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....
Probab=98.53 E-value=7.5e-08 Score=79.81 Aligned_cols=52 Identities=19% Similarity=0.297 Sum_probs=45.6
Q ss_pred eeeecCCCCCCCCCccccCCcEEEec-cccccceeeeeecCCCceeeeeCccccc
Q psy16352 739 HIAVLPHTPRHSSEMALLVGDRISVA-GNHWNGYSKGRNLRTDQLALYPTFKTSA 792 (905)
Q Consensus 739 ~~v~~~~~~~~~~El~l~~GD~I~~~-~~~~~G~~~G~n~~tg~~GlfP~~~v~~ 792 (905)
.+|+++|.+..++||+|++||+|.|. ....+||+.|++ +|+.|+||+.+|++
T Consensus 2 ~~a~~d~~~~~~~~Ls~~~Gd~i~v~~~~~~~~ww~~~~--~g~~G~~P~~~v~~ 54 (55)
T PF07653_consen 2 YRAIFDYVAEDPDELSFKKGDVIEVLGEKDDDGWWLGEN--NGRRGWFPSSYVEE 54 (55)
T ss_dssp EEESSSBESSSTTB-EB-TTEEEEEEEEECSTSEEEEEE--TTEEEEEEGGGEEE
T ss_pred EEEeEEECCCCCCceEEecCCEEEEEEeecCCCEEEEEE--CCcEEEEcHHHEEE
Confidence 47999999999999999999999998 667789999998 89999999998875
No 32
>KOG1702|consensus
Probab=98.50 E-value=5.3e-08 Score=98.85 Aligned_cols=57 Identities=18% Similarity=0.162 Sum_probs=53.6
Q ss_pred hhhheecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCcee
Q psy16352 803 RRIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVP 859 (905)
Q Consensus 803 ~~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~ 859 (905)
.+..+|+|+|.++++||+++.-||.|.-...++|||-.|+-.|||.+|+.|+||++-
T Consensus 207 gktyra~ydysaqdedevsF~dgd~ivnvq~iddGWmygtv~rtg~tGmlpaNyie~ 263 (264)
T KOG1702|consen 207 GKTYRAFYDYSAQDEDEVSFVDGDYIVNVQSIDDGWMYGTVVRTGWTGMLPANYIEF 263 (264)
T ss_pred CccchhhccCcccCcceeEEecCCeEEEEEeccCCceeeEEEeccccCCCchhheee
Confidence 367899999999999999999999999999999999889999999999999999963
No 33
>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies.
Probab=98.41 E-value=3.6e-07 Score=73.64 Aligned_cols=52 Identities=25% Similarity=0.340 Sum_probs=47.7
Q ss_pred eeeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCcccc
Q psy16352 739 HIAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTS 791 (905)
Q Consensus 739 ~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~ 791 (905)
.+|+|+|.+..++||+|++||+|.+.....+||+.|++.++ +.|+||+.+++
T Consensus 2 ~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~~~w~~~~~~~~-~~G~vP~~~v~ 53 (54)
T cd00174 2 VRALYDYDARDPDELSFKKGDIIEVLEKSDDGWWEGRLLGG-KRGLFPSNYVE 53 (54)
T ss_pred EEEEEeeCCCCCCCCCCCCCCEEEEEEcCCCCeEEEEECCC-CEEEEccccCc
Confidence 37999999999999999999999998888899999998776 99999998875
No 34
>smart00326 SH3 Src homology 3 domains. Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.
Probab=98.40 E-value=3.5e-07 Score=74.58 Aligned_cols=54 Identities=26% Similarity=0.319 Sum_probs=48.9
Q ss_pred ceeeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCccccc
Q psy16352 738 IHIAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSA 792 (905)
Q Consensus 738 ~~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~ 792 (905)
..+|+|+|.+..++||+|++||+|.+.....+||+.|++.+ |+.|+||+.+|+.
T Consensus 4 ~~~a~~~~~~~~~~~l~~~~Gd~v~v~~~~~~~w~~~~~~~-~~~G~vP~~~v~~ 57 (58)
T smart00326 4 QVRALYDYTAQDPDELSFKKGDIITVLEKSDDGWWKGRLGR-GKEGLFPSNYVEE 57 (58)
T ss_pred EEEEeeeeCCCCCCCCCCCCCCEEEEEEcCCCCeEEEEeCC-CCEEEEchHHEEE
Confidence 45899999999999999999999999888789999999876 9999999988764
No 35
>KOG2070|consensus
Probab=98.35 E-value=2.1e-07 Score=104.83 Aligned_cols=57 Identities=16% Similarity=0.185 Sum_probs=53.1
Q ss_pred hhheecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCceeccc
Q psy16352 804 RIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVPHVE 862 (905)
Q Consensus 804 ~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~v~~ 862 (905)
..++|-|+|.-.+.|||++..||+|.|....+-|||.|+. +|++|-||+|||.++-.
T Consensus 18 LvvrAkf~F~gsNnDELsf~KgDvItVTq~eeGGWWEGTl--ng~TGWFPsnYV~eik~ 74 (661)
T KOG2070|consen 18 LVVRAKFNFQGSNNDELSFSKGDVITVTQVEEGGWWEGTL--NGRTGWFPSNYVREIKS 74 (661)
T ss_pred eEEEEEeecccCCCceeccccCCEEEEEEeccCcceeccc--cCccCccchHHHHHHhh
Confidence 4679999999999999999999999999999999999997 79999999999987654
No 36
>KOG2856|consensus
Probab=98.34 E-value=1.1e-07 Score=103.81 Aligned_cols=54 Identities=20% Similarity=0.310 Sum_probs=48.4
Q ss_pred hhheecccCCCCCCCCccccCCCEEEEeee-eecceecceecCCCceeeccCCCce
Q psy16352 804 RIHIAVLPHTPRHSSEMDLMVGDRISVAGN-HWNGYSKGRNLRTDQLALYPTFKSV 858 (905)
Q Consensus 804 ~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~-~~dgw~~G~n~rtg~~GlfP~~~v~ 858 (905)
..++|||+|.++..|||+|+.||.|.++++ ++.||..|+. -+|+.||||+|||.
T Consensus 415 v~vraLYDY~gqE~DElsfkaGd~l~kl~eeDeqGWC~Grl-~~G~vGLyPAnYVe 469 (472)
T KOG2856|consen 415 VRVRALYDYAGQEGDELSFKAGDELEKLEEEDEQGWCKGRL-DSGRVGLYPANYVE 469 (472)
T ss_pred eeEEeeeccCcccccchhhccccHhhhcCCccccccccccc-cCCcccccchhhhh
Confidence 457999999999999999999999998654 6789999984 46999999999996
No 37
>KOG2546|consensus
Probab=98.14 E-value=1.2e-06 Score=97.63 Aligned_cols=56 Identities=18% Similarity=0.251 Sum_probs=51.8
Q ss_pred hhheecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCceecc
Q psy16352 804 RIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVPHV 861 (905)
Q Consensus 804 ~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~v~ 861 (905)
..+.|+|+|++..+|||++..|-+|.|+.+.+||||.|.. .|-+|+||.|||.++.
T Consensus 424 EkVv~iydy~~~KddeLsf~E~ailyv~kknddgw~EgV~--~~VTglFpgnyve~~~ 479 (483)
T KOG2546|consen 424 EKVVAIYDYTADKDDELSFAEGAILYVLKKNDDGWYEGVQ--DGVTGLFPGNYVEPLK 479 (483)
T ss_pred HHHHhhcccccccccccccccccEEEEEEecCCcchhhee--cCcceeccCccccccc
Confidence 4578999999999999999999999999999999999986 7999999999997654
No 38
>KOG2070|consensus
Probab=97.96 E-value=3.7e-06 Score=95.04 Aligned_cols=56 Identities=16% Similarity=0.214 Sum_probs=50.6
Q ss_pred ccceeeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCcccccC
Q psy16352 736 SRIHIAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSAD 793 (905)
Q Consensus 736 ~~~~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~~ 793 (905)
.-..+|-|+|...++|||++.+||+|+|......|||.|| .+|++|.||++||.++
T Consensus 17 pLvvrAkf~F~gsNnDELsf~KgDvItVTq~eeGGWWEGT--lng~TGWFPsnYV~ei 72 (661)
T KOG2070|consen 17 PLVVRAKFNFQGSNNDELSFSKGDVITVTQVEEGGWWEGT--LNGRTGWFPSNYVREI 72 (661)
T ss_pred ceEEEEEeecccCCCceeccccCCEEEEEEeccCcceecc--ccCccCccchHHHHHH
Confidence 3455899999999999999999999999999999999999 5799999999998853
No 39
>KOG2199|consensus
Probab=97.92 E-value=3.5e-06 Score=93.43 Aligned_cols=57 Identities=25% Similarity=0.327 Sum_probs=46.1
Q ss_pred ccceeeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCcccccCC
Q psy16352 736 SRIHIAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSADS 794 (905)
Q Consensus 736 ~~~~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~~~ 794 (905)
.+..||||||++..++||+++.||+|+|..+..--||+|.|. +..||||++||.+..
T Consensus 215 ~rkVRALYDFeAaE~nELsFkaGdIItVLd~s~~~WWKG~~~--~~~GlFPsnfVT~~l 271 (462)
T KOG2199|consen 215 VRKVRALYDFEAAEDNELSFKAGDIITVLDDSDPNWWKGENH--RGIGLFPSNFVTADL 271 (462)
T ss_pred chhhhhhhcccccCCCccceecCcEEEEcccCCcchhccccC--Ccccccchhhhhhhh
Confidence 456689999999999999999999999966655556666643 558999999988543
No 40
>KOG1118|consensus
Probab=97.88 E-value=5.7e-06 Score=89.11 Aligned_cols=55 Identities=15% Similarity=0.262 Sum_probs=49.2
Q ss_pred ceeeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCcccccCC
Q psy16352 738 IHIAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSADS 794 (905)
Q Consensus 738 ~~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~~~ 794 (905)
..+|+|+|+|++.+||.++.||+|.+...-.++|+.|. ..|++||||.+||+..+
T Consensus 308 ~cralYdFepenEgEL~fkeGDlI~l~~QIdenWyeG~--~~g~sG~FPvnYv~vlv 362 (366)
T KOG1118|consen 308 CCRALYDFEPENEGELDFKEGDLITLTNQIDENWYEGE--KHGESGMFPVNYVEVLV 362 (366)
T ss_pred hheeeeccCCCCCCccCcccCceeeehhhcCcchhhhe--ecCccCccccceeEEec
Confidence 34899999999999999999999999888888888887 46889999999998765
No 41
>KOG3775|consensus
Probab=97.85 E-value=6.4e-06 Score=90.55 Aligned_cols=62 Identities=29% Similarity=0.475 Sum_probs=54.8
Q ss_pred CCcccceeeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCcccccCC
Q psy16352 733 GQLSRIHIAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSADS 794 (905)
Q Consensus 733 ~~~~~~~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~~~ 794 (905)
+.+...++|++.|.|..+|||.|.+||-|.|.....+=|++|.|.|||++|+||++++-++.
T Consensus 259 e~qe~THR~~~rFvPRHpDELeLEIgDav~Ve~eadD~W~~G~NlRTG~~GIFPA~ya~evd 320 (482)
T KOG3775|consen 259 EEQEQTHRAVFRFVPRHPDELELEIGDAVLVEAEADDFWFEGFNLRTGERGIFPAFYAHEVD 320 (482)
T ss_pred hhhchhhhhhhhccCCCcceeeeecCCeeEeeecccchhhccccccccccccccceeEEecC
Confidence 33445669999999999999999999999998888888999999999999999999877554
No 42
>KOG3655|consensus
Probab=97.75 E-value=1.1e-05 Score=91.60 Aligned_cols=56 Identities=14% Similarity=0.192 Sum_probs=51.9
Q ss_pred hhhhheecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCce
Q psy16352 802 FRRIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSV 858 (905)
Q Consensus 802 ~~~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~ 858 (905)
...+.+|+|+|.+.++.||.+.++|+|.++...++|||.|.- -.|..||||+|||+
T Consensus 426 ~~q~A~A~~dyqAAddtEisf~p~d~it~Id~vdegww~g~~-pdG~~glfPaNyV~ 481 (484)
T KOG3655|consen 426 EPQTARALYDYQAADDTEISFDPPDAITLIDQVDEGWWTGQG-PDGEVGLFPANYVE 481 (484)
T ss_pred cCCCccccccccccCCcccccCCccccccccccCCccccccC-CCCCcCcccccccc
Confidence 345789999999999999999999999999999999999996 57899999999996
No 43
>KOG1702|consensus
Probab=97.73 E-value=1.7e-05 Score=81.10 Aligned_cols=58 Identities=17% Similarity=0.192 Sum_probs=54.0
Q ss_pred cccceeeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCccccc
Q psy16352 735 LSRIHIAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSA 792 (905)
Q Consensus 735 ~~~~~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~ 792 (905)
..+..+|.|+|.|++.||++++-||-|..+..-.+||..|+-+|||.+||.|.++++-
T Consensus 206 ~gktyra~ydysaqdedevsF~dgd~ivnvq~iddGWmygtv~rtg~tGmlpaNyie~ 263 (264)
T KOG1702|consen 206 TGKTYRAFYDYSAQDEDEVSFVDGDYIVNVQSIDDGWMYGTVVRTGWTGMLPANYIEF 263 (264)
T ss_pred CCccchhhccCcccCcceeEEecCCeEEEEEeccCCceeeEEEeccccCCCchhheee
Confidence 3478899999999999999999999999999999999999999999999999999863
No 44
>KOG4773|consensus
Probab=97.71 E-value=1.4e-05 Score=87.45 Aligned_cols=156 Identities=15% Similarity=0.125 Sum_probs=104.7
Q ss_pred cccccccCCCceeeeeehhhHh------hhhccCCCCCCCeeecccccccCCCcccceeeecCCCCCCCCCccccCCcEE
Q psy16352 688 DDIYYFGVPTATIWCICRTAYE------QMNAKFPDASDRYRSLDDIYYFGGQLSRIHIAVLPHTPRHSSEMALLVGDRI 761 (905)
Q Consensus 688 D~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ld~~~~~~~~~~~~~~v~~~~~~~~~~El~l~~GD~I 761 (905)
+.-||+|- =|+++|+|.| +....|+-.+..+..|- -.. ++-..+|.|++.+...+|+.=..
T Consensus 44 evkw~~~s----e~vVyrry~E~~~~tkklee~f~~ss~k~t~l~--~n~---p~LpA~v~fdfkqe~Ae~r~~~l---- 110 (386)
T KOG4773|consen 44 EVKWYGGS----EGVVYRRYFEFHALTKKLEERFGPSSGKSTALA--CNL---PTLPAIVYFDFKQEIAEERIPAL---- 110 (386)
T ss_pred Eehhhccc----cceeeeehhhhhhhcchHhhcCCCcccccCchh--ccC---CCCcceeEechhhhhhhhhhHHH----
Confidence 88999887 7899999999 33344443333332222 222 23445899999988877754322
Q ss_pred Eeccccccceeeee-ecCCCceeeeeCcccccCC-----------CCC---------hh--h----hhhhhheecccCCC
Q psy16352 762 SVAGNHWNGYSKGR-NLRTDQLALYPTFKTSADS-----------FPA---------FA--Y----IFRRIHIAVLPHTP 814 (905)
Q Consensus 762 ~~~~~~~~G~~~G~-n~~tg~~GlfP~~~v~~~~-----------~p~---------~~--~----~~~~~~~a~y~y~~ 814 (905)
|..=-|+.-. --+.|--||.|-+||.+.- -|. ++ + ......+|+++|+-
T Consensus 111 ----n~y~e~LlslPi~~l~~p~l~~fffvsp~D~~dVpeai~r~~Prt~~~ks~~~skasni~~~~~~q~~~a~~df~g 186 (386)
T KOG4773|consen 111 ----NAYCEWLLSLPIGRLGGPGLRPFFFVSPYDSEDVPEAIRRLRPRTRKWKSDGVSKASNIVLGMAAQRAEASFDFPG 186 (386)
T ss_pred ----HHHHHHHHhcchhhcCCCCceeeeeeccchHhhhhHHHHhcCchhhhccccccCccccccchhhhHHHHhhccCCC
Confidence 1110110000 0034557899988888532 121 10 1 11245699999999
Q ss_pred CCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCceeccc
Q psy16352 815 RHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVPHVE 862 (905)
Q Consensus 815 ~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~v~~ 862 (905)
...-||.|..||++.+..+++.|||.|.. -|.+|+||.+|++++..
T Consensus 187 ns~~EL~l~agdV~~~~~r~ek~W~~gk~--R~~~g~yp~sF~~~ld~ 232 (386)
T KOG4773|consen 187 NSKLELNLVAGDVEFLLSRDEKYWLLGKV--RGLTGYYPDSFVKQLDD 232 (386)
T ss_pred CccceeeeehhhHHHHHhhcccceeeeee--ccccccccHHhhhhhcc
Confidence 99999999999999999999999999987 49999999999997733
No 45
>KOG2856|consensus
Probab=97.66 E-value=1.6e-05 Score=87.25 Aligned_cols=66 Identities=21% Similarity=0.284 Sum_probs=52.7
Q ss_pred ecccccccCCCcccceeeecCCCCCCCCCccccCCcEEEeccc-cccceeeeeecCCCceeeeeCccccc
Q psy16352 724 SLDDIYYFGGQLSRIHIAVLPHTPRHSSEMALLVGDRISVAGN-HWNGYSKGRNLRTDQLALYPTFKTSA 792 (905)
Q Consensus 724 ~ld~~~~~~~~~~~~~~v~~~~~~~~~~El~l~~GD~I~~~~~-~~~G~~~G~n~~tg~~GlfP~~~v~~ 792 (905)
.+||.=.+|.- ...+|||+|.++..|||+++.||.|..-.. ..-||.+|.. ..|+.||||.+||+-
T Consensus 404 Pfdd~a~~g~~--v~vraLYDY~gqE~DElsfkaGd~l~kl~eeDeqGWC~Grl-~~G~vGLyPAnYVe~ 470 (472)
T KOG2856|consen 404 PFDDDAKGGDF--VRVRALYDYAGQEGDELSFKAGDELEKLEEEDEQGWCKGRL-DSGRVGLYPANYVEC 470 (472)
T ss_pred CCcccccCCce--eeEEeeeccCcccccchhhccccHhhhcCCccccccccccc-cCCcccccchhhhhc
Confidence 34444444443 556899999999999999999999988554 6679999973 469999999999874
No 46
>KOG3875|consensus
Probab=97.66 E-value=1.3e-05 Score=86.67 Aligned_cols=63 Identities=14% Similarity=0.067 Sum_probs=51.9
Q ss_pred hhheecccCCCCCCCCccccCCCEEEEeeee-----ecceecceecCCCceeeccCCCceecccCCCCC
Q psy16352 804 RIHIAVLPHTPRHSSEMDLMVGDRISVAGNH-----WNGYSKGRNLRTDQLALYPTFKSVPHVETARFP 867 (905)
Q Consensus 804 ~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~-----~dgw~~G~n~rtg~~GlfP~~~v~~v~~~~~~~ 867 (905)
-.|+|+|+|.++++-||+|+.||++.|..+. ...||.+..+..|.+|++|.|||| ++...+.|
T Consensus 269 ~~arA~YdF~a~np~ElSlk~Gdml~ia~K~dq~~~~~~gW~lat~dg~~tG~iP~NYvk-Ii~rq~qs 336 (362)
T KOG3875|consen 269 EFARALYDFVARNPVELSLKKGDMLAIASKEDQQGVRCEGWLLATRDGGTTGLIPINYVK-IIGRQPQS 336 (362)
T ss_pred HHHHHHhhhhcCCHHHhhhhcCchhhcccccccCCCCCcceeeeeccCCeeeeeehhhhh-hhhcCCCC
Confidence 5789999999999999999999999997764 344777877668999999999997 55543333
No 47
>KOG0162|consensus
Probab=97.54 E-value=5.6e-05 Score=88.93 Aligned_cols=54 Identities=17% Similarity=0.254 Sum_probs=50.1
Q ss_pred cceeeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCccccc
Q psy16352 737 RIHIAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSA 792 (905)
Q Consensus 737 ~~~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~ 792 (905)
...+|+|+|.+++.+||++++||+|.+....-+|||.|+ .+|+.|+||++||++
T Consensus 1052 p~~~A~Y~y~gq~~dEls~~~~diIei~~edpSGWw~gk--~~~keG~~P~~Yv~~ 1105 (1106)
T KOG0162|consen 1052 PVCEALYDYPGQDVDELSFKKGDIIEIMREDPSGWWLGK--LNGKEGLFPGNYVTE 1105 (1106)
T ss_pred cceeeeccCCCCCcccccccCCCEEEEeccCCCcchhhc--cCCcccccccccccc
Confidence 345899999999999999999999999999999999998 689999999999875
No 48
>KOG1264|consensus
Probab=97.52 E-value=5.2e-05 Score=90.01 Aligned_cols=59 Identities=14% Similarity=0.131 Sum_probs=52.9
Q ss_pred hhhheecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCceeccc
Q psy16352 803 RRIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVPHVE 862 (905)
Q Consensus 803 ~~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~v~~ 862 (905)
...|+|||+|.++.+|||++-.|-+|.+.++.+-|||.|.- -+...|-||+|||+++..
T Consensus 774 ~vt~kAL~~Yka~r~DELSFpk~aiItnv~keeg~wWrGdY-Gg~iq~wfPsnyVeei~~ 832 (1267)
T KOG1264|consen 774 QVTVKALYDYKAKRSDELSFPKGAIITNVSKEEGGWWRGDY-GGRIQQWFPSNYVEEIST 832 (1267)
T ss_pred chhhhhhhccccCCcccccccccceeEeeeccCCceeeccc-ccceeeeccHHHhhhhcc
Confidence 46899999999999999999999999999999999999974 245789999999997765
No 49
>PF10250 O-FucT: GDP-fucose protein O-fucosyltransferase; InterPro: IPR019378 This is a family of conserved proteins representing the enzyme responsible for adding O-fucose to EGF (epidermal growth factor-like) repeats. Six highly conserved cysteines are present as well as a DXD-like motif (ERD), conserved in mammals, Drosophila, and Caenorhabditis elegans. Both features are characteristic of several glycosyltransferase families. The enzyme is a membrane-bound protein released by proteolysis and, as for most glycosyltransferases, is strongly activated by manganese []. ; PDB: 3ZY6_A 3ZY3_A 3ZY5_A 3ZY2_A 3ZY4_A.
Probab=97.38 E-value=9.3e-05 Score=83.27 Aligned_cols=50 Identities=26% Similarity=0.408 Sum_probs=31.8
Q ss_pred EEEEecCCccchhHHHHHHHHHHHHHhcCcEEEEcC----CCCCCCCC----Ccccccc
Q psy16352 151 LVCELNKGCGYGCQLHHVVYCFIVAYATQRTLILDS----KEWSYSRG----GWEEVFQ 201 (905)
Q Consensus 151 L~c~~~~~cGfGc~lH~~~~cl~~A~~~nRtli~d~----~~~~Y~~~----~w~~~F~ 201 (905)
|+.+...| ||+-|..++.-.+++|...|||||+-. +.|..... .|+.+|-
T Consensus 1 ~~y~p~~G-GfnNQr~~~~~a~~~A~~LnRTLVLPp~~~~~~~~~~~~~~~ipf~~~fD 58 (351)
T PF10250_consen 1 LVYDPCMG-GFNNQRMGFENAVVFAKALNRTLVLPPFIKHYHWKDQSKQRHIPFSDFFD 58 (351)
T ss_dssp EEE---SS-SHHHHHHHHHHHHHHHHHHT-EEE--EEEEESSSS----EEEEEHHHHB-
T ss_pred CccCCCCC-CHHHHHHHHHHHHHHHHHhCCEEEcCCccccccccccccccccChhhhcc
Confidence 44555556 999999999999999999999999954 33433210 2888877
No 50
>KOG3523|consensus
Probab=97.36 E-value=2.8e-05 Score=90.26 Aligned_cols=59 Identities=17% Similarity=0.260 Sum_probs=54.8
Q ss_pred hheecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCceecccC
Q psy16352 805 IHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVPHVET 863 (905)
Q Consensus 805 ~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~v~~~ 863 (905)
.+.++-+|.|...|||.|+.||++.|..+..|||+.|.-.|-|..|-||+.||++|..+
T Consensus 610 Qv~~~~sy~a~q~Del~Le~~Dvv~v~~k~~DGWl~GeRl~Dge~GWFP~~~veeI~~~ 668 (695)
T KOG3523|consen 610 QVQCVHSYKAKQPDELTLELADVVNVLQKTPDGWLEGERLRDGERGWFPSSYVEEITNP 668 (695)
T ss_pred hhheeeccccCCCceeeeehhhhhhhhhcCCCccccccccccCccCcchHHHHHHhcCH
Confidence 46788899999999999999999999999999999999999999999999999887553
No 51
>KOG3601|consensus
Probab=97.18 E-value=7.7e-05 Score=77.15 Aligned_cols=108 Identities=12% Similarity=0.035 Sum_probs=87.5
Q ss_pred eeecCCCCCCCCCccccCCcEEEeccc-cccceeeeeecCCCceeeeeCcccccCCCCChhhhhhhhheecccCCCCCCC
Q psy16352 740 IAVLPHTPRHSSEMALLVGDRISVAGN-HWNGYSKGRNLRTDQLALYPTFKTSADSFPAFAYIFRRIHIAVLPHTPRHSS 818 (905)
Q Consensus 740 ~v~~~~~~~~~~El~l~~GD~I~~~~~-~~~G~~~G~n~~tg~~GlfP~~~v~~~~~p~~~~~~~~~~~a~y~y~~~~~d 818 (905)
.+++++.+...|||++.+||.|.+-.. .|--|++-+ ..|..|..|.++..-+.. .|+.++|+..++.+.
T Consensus 4 ~a~n~f~a~i~dELsFlkg~~lk~l~~~d~~nw~~ae--l~g~~g~~P~Nai~~~~~--------~wve~~i~r~~ae~~ 73 (222)
T KOG3601|consen 4 VAKNDFLAGIRDELSFLKGDNLKILNMEDDINWYKAE--LDGPEGFIPKNAIRMKPH--------EWVEGLIPRPLAEDL 73 (222)
T ss_pred hhhhhhhhcCcccceeecCCceEecchHHhhhhhhHh--hcCccccCcccccccccc--------cceecccccchhhhh
Confidence 578889999999999999998877332 333355443 467889999888543322 478888998888888
Q ss_pred CccccCCCEEEEeeeeecceecceecCCCceeeccCCCcee
Q psy16352 819 EMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVP 859 (905)
Q Consensus 819 EL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~ 859 (905)
.+.+++||.|...++..-||+.|.- .+..|++|.++|++
T Consensus 74 l~~~~~G~fl~r~s~sSPg~fsgsv--r~~d~vqhfkvvrp 112 (222)
T KOG3601|consen 74 LSKKRDGDFLIRLSESSPGDFSGSV--RFPDGVQHFKVVRP 112 (222)
T ss_pred hhccCcchhhhhhhhcCcccccccc--cCCCCceecccccc
Confidence 8999999999999999999999986 58999999999966
No 52
>KOG2996|consensus
Probab=97.03 E-value=0.00042 Score=80.14 Aligned_cols=52 Identities=21% Similarity=0.372 Sum_probs=45.5
Q ss_pred eeecCCCCCCCCCccccCCcEEEeccc--cccceeeeeecCCCceeeeeCcccccC
Q psy16352 740 IAVLPHTPRHSSEMALLVGDRISVAGN--HWNGYSKGRNLRTDQLALYPTFKTSAD 793 (905)
Q Consensus 740 ~v~~~~~~~~~~El~l~~GD~I~~~~~--~~~G~~~G~n~~tg~~GlfP~~~v~~~ 793 (905)
+|-|++-+.+..||||+.||+|.+-.. .-.|||+|+ -+|+.|.||+.||++.
T Consensus 809 varYdf~ard~~eLSlk~GDvV~i~~k~g~d~GWWkGe--vngrvGwFPstYVee~ 862 (865)
T KOG2996|consen 809 VARYDFCARDMRELSLKEGDVVKIYDKVGEDQGWWKGE--VNGRVGWFPSTYVEED 862 (865)
T ss_pred eeccccCCCchhhcccccCCEEEEehhccccCceecce--ecCccccccccccccc
Confidence 788999999999999999999999544 336999997 6899999999999864
No 53
>KOG4792|consensus
Probab=97.02 E-value=0.00027 Score=73.62 Aligned_cols=56 Identities=9% Similarity=0.131 Sum_probs=52.1
Q ss_pred hhhheecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCcee
Q psy16352 803 RRIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVP 859 (905)
Q Consensus 803 ~~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~ 859 (905)
.-+++|+|+|+-.++++|.++.|+++.+.++.++-||..+| ..|++||.|..||+.
T Consensus 124 ~~~vr~~fdF~G~deeDLPFkkGeiL~I~~K~eeqWW~Arn-s~Gk~GmIPvpYVe~ 179 (293)
T KOG4792|consen 124 AEYVRALFDFNGNDEEDLPFKKGEILRIRDKPEEQWWNARN-SEGKRGMIPVPYVEK 179 (293)
T ss_pred hhheeeeeccCCCccccCCcccCcEEEEecCcHHHhhhhhc-cCCcccceechHHHh
Confidence 34678999999999999999999999999999999999998 589999999999964
No 54
>PF01531 Glyco_transf_11: Glycosyl transferase family 11; InterPro: IPR002516 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 11 GT11 from CAZY comprises enzymes with only one known activity; galactoside 2-L-fucosyltransferase (2.4.1.69 from EC). Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 2-L-fucosyltransferase 1 (2.4.1.69 from EC) and Galactoside 2-L-fucosyltransferase 2 (2.4.1.69 from EC) belong to the Hh blood group system and are associated with H/h and Se/se antigens.; GO: 0008107 galactoside 2-alpha-L-fucosyltransferase activity, 0005975 carbohydrate metabolic process, 0016020 membrane
Probab=96.95 E-value=0.0016 Score=72.40 Aligned_cols=82 Identities=22% Similarity=0.305 Sum_probs=52.3
Q ss_pred HHHHHHhCCChhHHHHHHHHhhhcC-----CCCCeeeeeeeecccccccc--cCC--ChHHHHHHHHHHHHHHhccCCCc
Q psy16352 268 QFLMFLNNPTPNTREIVAKYGEKIK-----FQKPIVGIHIRRTDKVDTEA--ALH--PVEEYMTGVEEYYKQLALTQTVD 338 (905)
Q Consensus 268 Q~~~YL~RP~~~~~~~i~~~~~~l~-----f~~PiVgvHVRrtDK~~~Ea--~~~--~leeYM~~v~~~~~~~~~~~~~~ 338 (905)
|..+|.....+.+++.+++..+++. -....|||||||||=+.... ..+ .-.+|+..|-+++..- ..
T Consensus 131 q~~~~f~~~~~~l~~~~~~~~~~~~~~~~~~~~~~V~VHIRRGDy~~~~~~~~~~~~~~~~Yy~~Ai~~i~~~-----~~ 205 (298)
T PF01531_consen 131 QSIKYFFDIKDELREEFKEFLRELNLEIIIKNSNSVCVHIRRGDYVSNGNHNWKHGICDKDYYKKAIEYIREK-----VK 205 (298)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEchhccccccccccCCCCCHHHHHHHHHHHHHh-----CC
Confidence 4567777777777777665444332 23578999999999874221 122 2346766666666431 22
Q ss_pred eeEEEEEecchhhhhH
Q psy16352 339 VKRVYVATDDASVLTE 354 (905)
Q Consensus 339 ~~ri~LaTDd~~vi~E 354 (905)
.-.+|+.|||++=..+
T Consensus 206 ~~~f~ifSDD~~w~k~ 221 (298)
T PF01531_consen 206 NPKFFIFSDDIEWCKE 221 (298)
T ss_pred CCEEEEEcCCHHHHHH
Confidence 3479999999886654
No 55
>KOG3565|consensus
Probab=96.92 E-value=0.00066 Score=82.04 Aligned_cols=121 Identities=12% Similarity=0.082 Sum_probs=83.9
Q ss_pred eecCCCCCCCCCccccCC-cEEEeccccccceeeeeecCCCceeeeeCcccccC---C---------CC-Chhhhhhhhh
Q psy16352 741 AVLPHTPRHSSEMALLVG-DRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSAD---S---------FP-AFAYIFRRIH 806 (905)
Q Consensus 741 v~~~~~~~~~~El~l~~G-D~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~~---~---------~p-~~~~~~~~~~ 806 (905)
+-+.+....++|+....+ -+..|......++..+....++..|+.++-..... . +| +.+..+.+.+
T Consensus 502 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~~s~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~p~~~~~ 581 (640)
T KOG3565|consen 502 SGDSYLRKSDDEIKWTEPGGRSGVFTDSESPELSASPPPPSESGTPVSLRSDKDPHASLDSLSRDSLLPPPIPSPPIRTS 581 (640)
T ss_pred CCccccccccccccccCCCCcccccccCCCCccccCCCCCcccccccccCCCCCcccccCCcccccccCCCCCCCCccce
Confidence 334555545555554433 34455555556566666667777766664221100 0 11 3455567899
Q ss_pred eecccCCCCCCCCccccCCCEEEEeeee-ecceecceecCCCceeeccCCCceecc
Q psy16352 807 IAVLPHTPRHSSEMDLMVGDRISVAGNH-WNGYSKGRNLRTDQLALYPTFKSVPHV 861 (905)
Q Consensus 807 ~a~y~y~~~~~dEL~l~~GD~i~v~~~~-~dgw~~G~n~rtg~~GlfP~~~v~~v~ 861 (905)
.|+|+|.+++++++.+.+||++.|++.. .+||-+|.-.+.+..|.+|++|++.+.
T Consensus 582 ~a~~~~~~~s~~~~si~~~~il~~ie~~~g~gwt~~r~~~~~~~g~~Ptsyl~~~~ 637 (640)
T KOG3565|consen 582 KALYAFEGQSEGTISIDPGEILQVIEEDKGDGWTRGRLEPNGEKGYVPTSYLDVTE 637 (640)
T ss_pred ecccCcCCCCCCccccCcchhHHHHhhcccCCCCCCCCCCCCcCCCCCcccccccc
Confidence 9999999999999999999999998774 899988885578999999999997554
No 56
>KOG3849|consensus
Probab=96.72 E-value=0.0038 Score=66.88 Aligned_cols=125 Identities=22% Similarity=0.295 Sum_probs=79.0
Q ss_pred ccCChhHHHHHHHHhhhccCCCCcceeEEecCCCCC--cc-----------------------------ccccChHHHHH
Q psy16352 530 NNPTPNTREIVAKYGEKIKFQKPIVGIHIRRTDKVD--TE-----------------------------AALHPVEEYMT 578 (905)
Q Consensus 530 lRP~~~~~~~I~~~~~~l~f~~PiVGVHIRrgDK~~--~E-----------------------------a~~~~l~eYm~ 578 (905)
+|-+.++.+.-++.+++ .+.+|.||||.|-|--.. .| +-.-+.++-+.
T Consensus 210 l~WS~r~~e~~k~fI~a-~L~rpfvgiHLRng~DWvraCehikd~~~~hlfASpQClGy~~~~gaLt~e~C~Psk~~I~r 288 (386)
T KOG3849|consen 210 LRWSSRITEQAKKFISA-NLARPFVGIHLRNGADWVRACEHIKDTTNRHLFASPQCLGYGHHLGALTKEICSPSKQQILR 288 (386)
T ss_pred HHHHHHHHHHHHHHHHH-hcCcceeEEEeecCchHHHHHHHhcccCCCccccChhhccccccccccchhhhCccHHHHHH
Confidence 34455555555555544 367899999999873210 01 11112233334
Q ss_pred HHHHHHHHHhccCCCCcceEEEEcCCHHHHHHHHhhCCCcE--EEcCCcccccccccccchhhhhhHHHHHHHHHhcCCe
Q psy16352 579 GVEEYYKQLALTQTVDVKRVYVATDDASVLTEIREKYPQYS--VLGDPSIARTASLEHRYLKSSLLGIITDLHYLSNCDH 656 (905)
Q Consensus 579 ~ve~~~~~~~~~~~~~~~~IfLATDDp~Vi~e~k~~yp~y~--~i~~~~~~~~a~~~~R~s~~~l~~~l~Dl~lLs~cD~ 656 (905)
.+.+++..+ .+.+.||||||+...++|+.+..-.+. +..- .-..+-+|+++|..+|+
T Consensus 289 qik~~v~si-----~dakSVfVAsDs~hmi~Eln~aL~~~~i~vh~l----------------~pdd~y~dLaIlGqadh 347 (386)
T KOG3849|consen 289 QIKEKVGSI-----GDAKSVFVASDSDHMIDELNEALKPYEIEVHRL----------------EPDDMYTDLAILGQADH 347 (386)
T ss_pred HHHHHHhhh-----cccceEEEeccchhhhHHHHHhhcccceeEEec----------------Ccccchhhhhhhcccch
Confidence 444443322 357899999999999999974332221 1111 11236789999999999
Q ss_pred EEEcccCcHhHHHHHHHhcc
Q psy16352 657 LVCTFSSQICRTAYEQMNAK 676 (905)
Q Consensus 657 ~VgT~SSnv~RLa~eLrqt~ 676 (905)
|||..-|+++-++..=|..-
T Consensus 348 FiGNCvSsfsafvKRERD~~ 367 (386)
T KOG3849|consen 348 FIGNCVSSFSAFVKRERDHA 367 (386)
T ss_pred hhhhhHHHHHHHHhhhhccc
Confidence 99999999998887766544
No 57
>KOG1843|consensus
Probab=96.70 E-value=0.00076 Score=75.58 Aligned_cols=54 Identities=17% Similarity=0.285 Sum_probs=48.3
Q ss_pred hhheecccCCCCCCCCccccCCCEEEEeeee--ecceecceecCCCceeeccCCCcee
Q psy16352 804 RIHIAVLPHTPRHSSEMDLMVGDRISVAGNH--WNGYSKGRNLRTDQLALYPTFKSVP 859 (905)
Q Consensus 804 ~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~--~dgw~~G~n~rtg~~GlfP~~~v~~ 859 (905)
-++.|+|++.-+..++|.|+.||+|.++++- .+.||.|+- .+..||||+|||+.
T Consensus 417 n~a~a~ysfage~~GDl~f~kgDii~il~ks~s~~dwwtgr~--~~~egifPanyv~~ 472 (473)
T KOG1843|consen 417 NIATALYSFAGEQPGDLSFQKGDIITILKKSDSANDWWTGRG--NGYEGIFPANYVSL 472 (473)
T ss_pred ceeeeeehhccCCCCCcccccCceEEEecCCcchhhHHHhhc--cccccccccceecc
Confidence 3679999999999999999999999998774 689999964 79999999999973
No 58
>KOG2528|consensus
Probab=96.63 E-value=0.0013 Score=74.59 Aligned_cols=58 Identities=19% Similarity=0.273 Sum_probs=50.5
Q ss_pred hheecccCCCCCCCCccccCCCEEEEeee-eecceecceecCCCceeeccCCCceecccCC
Q psy16352 805 IHIAVLPHTPRHSSEMDLMVGDRISVAGN-HWNGYSKGRNLRTDQLALYPTFKSVPHVETA 864 (905)
Q Consensus 805 ~~~a~y~y~~~~~dEL~l~~GD~i~v~~~-~~dgw~~G~n~rtg~~GlfP~~~v~~v~~~~ 864 (905)
..||+|++...+..||++..||++.+..+ .-+|||.|.|- +|.+|+||++||+ |+.++
T Consensus 4 k~RamyDf~~E~~sElsi~~~evl~i~~e~~~~GwLeg~Ns-rge~GlfPa~yVe-V~~~a 62 (490)
T KOG2528|consen 4 KARAMYDFQSEGHSELSIWEGEVLSITSEDVIEGWLEGSNS-RGERGLFPASYVE-VTRLA 62 (490)
T ss_pred chhhhcchhhcccccccccccceeeecCcccccccccCCCc-cCccCCCccccee-eeccc
Confidence 46999999999999999999999999654 68999999984 7999999999996 44443
No 59
>KOG4429|consensus
Probab=96.60 E-value=0.001 Score=71.41 Aligned_cols=63 Identities=13% Similarity=0.051 Sum_probs=56.5
Q ss_pred CChhhhhhhhheecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCceec
Q psy16352 796 PAFAYIFRRIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVPH 860 (905)
Q Consensus 796 p~~~~~~~~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~v 860 (905)
|.+.......|.|+|+++++.+|||.+..||++.+.++-+.|||.|+. .|+.|-||+-+|.+.
T Consensus 356 ~~aaelek~lcdafYSfqarqddel~~e~gditif~Ekkeeg~~f~rl--~gd~~hf~Aa~iEea 418 (421)
T KOG4429|consen 356 GEAAELEKILCDAFYSFQARQDDELGGEIGDITIFDEKKEEGPTFCRL--LGDFEHFHAAEIEEA 418 (421)
T ss_pred ccHHHHHHHHhhhhhccccccccccCCcccceeeecCcccCCCceeee--ccccCCCcHHHHHHh
Confidence 335666788999999999999999999999999999999999999987 599999999998643
No 60
>KOG4575|consensus
Probab=96.30 E-value=0.0031 Score=73.85 Aligned_cols=56 Identities=16% Similarity=0.086 Sum_probs=47.5
Q ss_pred hhheecccCCCCCCCCccccCCCEEEEeeeeecceecceecC-CCceeeccCCCceec
Q psy16352 804 RIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLR-TDQLALYPTFKSVPH 860 (905)
Q Consensus 804 ~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~r-tg~~GlfP~~~v~~v 860 (905)
-.++|+|.+.-+.+++|-+-.||+|++++-. ||||-|...| +...|+||+|||--+
T Consensus 9 ~~vrA~y~w~ge~eGdl~f~egDlie~trI~-dgkwwi~lhrNk~~~g~fpsNFvhcL 65 (874)
T KOG4575|consen 9 CMVRALYAWPGEREGDLKFTEGDLIEQTRIE-DGKWWILLHRNKDEDGLFPSNFVHCL 65 (874)
T ss_pred ceEEeeccCCCCcccccceecccceeEEeec-cceeeeeeeecccccccCcccceeec
Confidence 4579999999999999999999999998766 8886555556 788999999999433
No 61
>KOG2546|consensus
Probab=96.26 E-value=0.0024 Score=72.11 Aligned_cols=55 Identities=16% Similarity=0.231 Sum_probs=49.9
Q ss_pred ceeeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCcccccCC
Q psy16352 738 IHIAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSADS 794 (905)
Q Consensus 738 ~~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~~~ 794 (905)
..+|+|+|++...|||++.-|-+|-|.....|||+.|. ..|-+||||.+||++..
T Consensus 425 kVv~iydy~~~KddeLsf~E~ailyv~kknddgw~EgV--~~~VTglFpgnyve~~~ 479 (483)
T KOG2546|consen 425 KVVAIYDYTADKDDELSFAEGAILYVLKKNDDGWYEGV--QDGVTGLFPGNYVEPLK 479 (483)
T ss_pred HHHhhcccccccccccccccccEEEEEEecCCcchhhe--ecCcceeccCccccccc
Confidence 34789999999999999999999999999999999996 67889999999998754
No 62
>KOG1264|consensus
Probab=96.09 E-value=0.0032 Score=75.50 Aligned_cols=57 Identities=16% Similarity=0.176 Sum_probs=49.7
Q ss_pred eeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCcccccCCCCC
Q psy16352 740 IAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSADSFPA 797 (905)
Q Consensus 740 ~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~~~~p~ 797 (905)
+|||+|+++.+|||++-+|-+|++......|||+|.- .+..+|.||+++|+++..|.
T Consensus 778 kAL~~Yka~r~DELSFpk~aiItnv~keeg~wWrGdY-Gg~iq~wfPsnyVeei~~~~ 834 (1267)
T KOG1264|consen 778 KALYDYKAKRSDELSFPKGAIITNVSKEEGGWWRGDY-GGRIQQWFPSNYVEEISTAD 834 (1267)
T ss_pred hhhhccccCCcccccccccceeEeeeccCCceeeccc-ccceeeeccHHHhhhhcccc
Confidence 7999999999999999999999999999899999852 23478999999999877554
No 63
>KOG3523|consensus
Probab=96.03 E-value=0.0015 Score=76.48 Aligned_cols=71 Identities=18% Similarity=0.245 Sum_probs=58.7
Q ss_pred ecccccccCCCcccceeeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCcccccCCCC
Q psy16352 724 SLDDIYYFGGQLSRIHIAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSADSFP 796 (905)
Q Consensus 724 ~ld~~~~~~~~~~~~~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~~~~p 796 (905)
..|.+|--++. ....++-+|.|..+||++|+.||++.|.....|||++|+-.+.|..|.||..+|+++.-|
T Consensus 598 ~~~~i~e~~dc--pQv~~~~sy~a~q~Del~Le~~Dvv~v~~k~~DGWl~GeRl~Dge~GWFP~~~veeI~~~ 668 (695)
T KOG3523|consen 598 PPEKIYEEWDC--PQVQCVHSYKAKQPDELTLELADVVNVLQKTPDGWLEGERLRDGERGWFPSSYVEEITNP 668 (695)
T ss_pred ChhhhhhccCC--ChhheeeccccCCCceeeeehhhhhhhhhcCCCccccccccccCccCcchHHHHHHhcCH
Confidence 44444444443 222467799999999999999999999999999999999999999999999999988754
No 64
>KOG0199|consensus
Probab=95.89 E-value=0.01 Score=71.04 Aligned_cols=52 Identities=23% Similarity=0.311 Sum_probs=43.0
Q ss_pred eecccCCCCCCCCccccCCCEEEEeeeeecce-ecceecCCCceeeccCCCce
Q psy16352 807 IAVLPHTPRHSSEMDLMVGDRISVAGNHWNGY-SKGRNLRTDQLALYPTFKSV 858 (905)
Q Consensus 807 ~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw-~~G~n~rtg~~GlfP~~~v~ 858 (905)
+|.-.|.....|-|.|+.||.|.|++.--.|+ |+|-|.||++.|.||.+-|.
T Consensus 378 ~a~~~~d~~ep~aLh~~kgD~IvVIegs~a~y~WfgQn~Rn~kvG~Fprsvvt 430 (1039)
T KOG0199|consen 378 VARETYDSIEPGALHLTKGDEIVVIEGSGAGYDWFGQNKRNQKVGTFPRSVVT 430 (1039)
T ss_pred eeeeeccccCCCceeeccCCeEEEEecCCccceeeccccccceecccCcceee
Confidence 34444455556899999999999999886555 99999999999999999775
No 65
>KOG3655|consensus
Probab=95.86 E-value=0.0041 Score=71.31 Aligned_cols=53 Identities=15% Similarity=0.237 Sum_probs=47.9
Q ss_pred eeeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCccccc
Q psy16352 739 HIAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSA 792 (905)
Q Consensus 739 ~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~ 792 (905)
.+|+|+|.+-++-||+..++|.|.++...-+|||.|.. -.|+.||||++||+-
T Consensus 430 A~A~~dyqAAddtEisf~p~d~it~Id~vdegww~g~~-pdG~~glfPaNyV~l 482 (484)
T KOG3655|consen 430 ARALYDYQAADDTEISFDPPDAITLIDQVDEGWWTGQG-PDGEVGLFPANYVEL 482 (484)
T ss_pred ccccccccccCCcccccCCccccccccccCCccccccC-CCCCcCccccccccc
Confidence 47999999999999999999999998888899999986 578999999999874
No 66
>KOG0515|consensus
Probab=95.63 E-value=0.0054 Score=70.80 Aligned_cols=51 Identities=14% Similarity=0.130 Sum_probs=42.5
Q ss_pred hheecccCCCCCCCCccccCCCEEEEeeee---ecceecceecCCCceeeccCCCc
Q psy16352 805 IHIAVLPHTPRHSSEMDLMVGDRISVAGNH---WNGYSKGRNLRTDQLALYPTFKS 857 (905)
Q Consensus 805 ~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~---~dgw~~G~n~rtg~~GlfP~~~v 857 (905)
-+-|+|+|.++.+|||+++.||-+.|+++. +-.||--.+ +|+.|..|.||.
T Consensus 685 ~vYAlwdYeaqf~DELsf~eGd~lTvirr~d~~eteWWwa~l--ng~eGyVPRnyl 738 (752)
T KOG0515|consen 685 VVYALWDYEAQFEDELSFDEGDELTVIRRDDEVETEWWWARL--NGEEGYVPRNYL 738 (752)
T ss_pred eeEEeecccccccccccccCCceeEEEecCCcchhhhhhHhh--cCcccccchhhh
Confidence 357999999999999999999999998873 445654444 599999999997
No 67
>KOG3875|consensus
Probab=95.57 E-value=0.0038 Score=68.03 Aligned_cols=57 Identities=18% Similarity=0.227 Sum_probs=44.9
Q ss_pred ccceeeecCCCCCCCCCccccCCcEEEeccc------cccceeeeeecCCCceeeeeCcccccC
Q psy16352 736 SRIHIAVLPHTPRHSSEMALLVGDRISVAGN------HWNGYSKGRNLRTDQLALYPTFKTSAD 793 (905)
Q Consensus 736 ~~~~~v~~~~~~~~~~El~l~~GD~I~~~~~------~~~G~~~G~n~~tg~~GlfP~~~v~~~ 793 (905)
....+|+|+|.+.++.||+|++||++.|+.. .-+||..-+ ...|.+|++|.+||+.+
T Consensus 268 ~~~arA~YdF~a~np~ElSlk~Gdml~ia~K~dq~~~~~~gW~lat-~dg~~tG~iP~NYvkIi 330 (362)
T KOG3875|consen 268 HEFARALYDFVARNPVELSLKKGDMLAIASKEDQQGVRCEGWLLAT-RDGGTTGLIPINYVKII 330 (362)
T ss_pred HHHHHHHhhhhcCCHHHhhhhcCchhhcccccccCCCCCcceeeee-ccCCeeeeeehhhhhhh
Confidence 3455899999999999999999999999432 334665433 35789999999999954
No 68
>PF03254 XG_FTase: Xyloglucan fucosyltransferase; InterPro: IPR004938 Plant cell walls are crucial for development, signal transduction, and disease resistance in plants. Cell walls are made of cellulose, hemicelluloses, and pectins. Xyloglucan (XG), the principal load-bearing hemicellulose of dicotyledonous plants, has a terminal fucosyl residue. This fucosyltransferase adds this residue []. ; GO: 0008107 galactoside 2-alpha-L-fucosyltransferase activity, 0042546 cell wall biogenesis, 0016020 membrane
Probab=95.50 E-value=0.75 Score=54.13 Aligned_cols=89 Identities=17% Similarity=0.235 Sum_probs=63.2
Q ss_pred HHHHHHHhCCChhHHHHHHHHhhhc-CCCCCeeeeeeeecccccccccCCChHHHHHHHHHHHHHHhc-------c----
Q psy16352 267 GQFLMFLNNPTPNTREIVAKYGEKI-KFQKPIVGIHIRRTDKVDTEAALHPVEEYMTGVEEYYKQLAL-------T---- 334 (905)
Q Consensus 267 GQ~~~YL~RP~~~~~~~i~~~~~~l-~f~~PiVgvHVRrtDK~~~Ea~~~~leeYM~~v~~~~~~~~~-------~---- 334 (905)
-++.||||+|+..+-..|.+.-..- --..-.|||+||.-+.-. .+++.+|+++-.=-.+-.+ .
T Consensus 271 hhL~RYLfhPsN~VW~~Itryy~ayLa~Ad~riGIQIRvf~~~~-----~~~~~~~dqIl~C~~~e~LLP~v~~~~~~~~ 345 (476)
T PF03254_consen 271 HHLGRYLFHPSNQVWGLITRYYDAYLAKADERIGIQIRVFDPKP-----GPFQHVLDQILSCTQQEKLLPEVVDTQEPAA 345 (476)
T ss_pred HHHHHHHcCCCchhHHHHHHHHHHHccCcCceeEEEEEecCCCC-----CcchhHHHHHHHHHhhcccCCCccccccccc
Confidence 4899999999999999999886542 113447999999988642 3567788777663322100 0
Q ss_pred ----CCCceeEEEEEecchhhhhHHHHhhh
Q psy16352 335 ----QTVDVKRVYVATDDASVLTEIREKSL 360 (905)
Q Consensus 335 ----~~~~~~ri~LaTDd~~vi~EakekSL 360 (905)
.....+.|++++.-+.-.++++....
T Consensus 346 ~~~~~~~~~kaVlVtSL~~~yye~lr~~Y~ 375 (476)
T PF03254_consen 346 SSSSKSQKSKAVLVTSLYSEYYEKLRNMYW 375 (476)
T ss_pred cccCCCCceEEEEEEeCCHHHHHHHHHHHh
Confidence 01235789999999999999888653
No 69
>KOG3632|consensus
Probab=95.44 E-value=0.0097 Score=72.84 Aligned_cols=135 Identities=20% Similarity=0.159 Sum_probs=94.8
Q ss_pred hcCCeEEEcccCcHhHHHHHHHhccCCCceeeccccc-ccccccCCCceeeeeehhhHhhhh------------ccCCCC
Q psy16352 652 SNCDHLVCTFSSQICRTAYEQMNAKFPDASDRYRSLD-DIYYFGVPTATIWCICRTAYEQMN------------AKFPDA 718 (905)
Q Consensus 652 s~cD~~VgT~SSnv~RLa~eLrqt~~~d~~~~~~slD-~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~ 718 (905)
|..||==-++|-|+---=-||-... ||++-.+-+-| +-||-||.||++|.||=..+..++ ..+|-
T Consensus 1143 AlfDYDpl~MSpNpDAaEeELpFre-gqIikV~GDkDadgFY~GE~ngr~GlIPcNmvae~~vd~eq~~~r~rqG~lPs- 1220 (1335)
T KOG3632|consen 1143 ALFDYDPLQMSPNPDAAEEELPFRE-GQIIKVLGDKDADGFYMGELNGRRGLIPCNMVAEQPVDNEQTDRRWRQGLLPS- 1220 (1335)
T ss_pred eeeccCccccCCCCChhhhcccccc-CcEEEEeccccccceeecccccccccccccccccccCCcHHHHHHHHhccCCC-
Confidence 3445555588888877777787776 58888887777 469999999999999877766333 12221
Q ss_pred CCCeeeccccc---ccCCCc------ccceeeecCCCCCC-------CCCccccCCcEEEeccc-cccceeeeeecCCCc
Q psy16352 719 SDRYRSLDDIY---YFGGQL------SRIHIAVLPHTPRH-------SSEMALLVGDRISVAGN-HWNGYSKGRNLRTDQ 781 (905)
Q Consensus 719 ~~~~~~ld~~~---~~~~~~------~~~~~v~~~~~~~~-------~~El~l~~GD~I~~~~~-~~~G~~~G~n~~tg~ 781 (905)
+.++++.- .--|+. .+.-+|.|+|.++. ..|+.++.||+|.|.+. ..+|++.|+ .+|+
T Consensus 1221 ---v~~~e~~~gs~~s~g~~k~vp~~p~~mvaa~dydpqeSSpg~dgeAelafraGdIitVfg~mdddgfyyGe--lngq 1295 (1335)
T KOG3632|consen 1221 ---VPTEEMRKGSAFSDGQQKMVPWPPRQMVAASDYDPQESSPGLDGEAELAFRAGDIITVFGKMDDDGFYYGE--LNGQ 1295 (1335)
T ss_pred ---CCchhhhcccccCCCCccccCCchhhhhhhhcCCcccCCCCcccceeeccccCCeEEeeccccCCcccccc--cCCc
Confidence 11222111 111322 12336889999873 58999999999999887 556899998 5799
Q ss_pred eeeeeCcccccC
Q psy16352 782 LALYPTFKTSAD 793 (905)
Q Consensus 782 ~GlfP~~~v~~~ 793 (905)
.|++|++|.+..
T Consensus 1296 kglvpsnfle~p 1307 (1335)
T KOG3632|consen 1296 KGLVPSNFLEAP 1307 (1335)
T ss_pred cCccccccccCC
Confidence 999999998743
No 70
>KOG2528|consensus
Probab=95.27 E-value=0.0077 Score=68.52 Aligned_cols=53 Identities=19% Similarity=0.357 Sum_probs=48.1
Q ss_pred eeeecCCCCCCCCCccccCCcEEEe-ccccccceeeeeecCCCceeeeeCccccc
Q psy16352 739 HIAVLPHTPRHSSEMALLVGDRISV-AGNHWNGYSKGRNLRTDQLALYPTFKTSA 792 (905)
Q Consensus 739 ~~v~~~~~~~~~~El~l~~GD~I~~-~~~~~~G~~~G~n~~tg~~GlfP~~~v~~ 792 (905)
.||+|++...++.||++..||++.+ ..++.+||+.|.| .+|..|+||..+|+.
T Consensus 5 ~RamyDf~~E~~sElsi~~~evl~i~~e~~~~GwLeg~N-srge~GlfPa~yVeV 58 (490)
T KOG2528|consen 5 ARAMYDFQSEGHSELSIWEGEVLSITSEDVIEGWLEGSN-SRGERGLFPASYVEV 58 (490)
T ss_pred hhhhcchhhcccccccccccceeeecCcccccccccCCC-ccCccCCCcccceee
Confidence 4899999999999999999999998 5579999999998 578999999999884
No 71
>KOG3849|consensus
Probab=95.17 E-value=0.25 Score=53.49 Aligned_cols=99 Identities=26% Similarity=0.400 Sum_probs=62.4
Q ss_pred CCCCCeeeeeeeeccc-cc-c-----------------------------cccCCChHHHHHHHHHHHHHHhccCCCcee
Q psy16352 292 KFQKPIVGIHIRRTDK-VD-T-----------------------------EAALHPVEEYMTGVEEYYKQLALTQTVDVK 340 (905)
Q Consensus 292 ~f~~PiVgvHVRrtDK-~~-~-----------------------------Ea~~~~leeYM~~v~~~~~~~~~~~~~~~~ 340 (905)
...+|-||||.|.|-- +. | |+-.-+.++-+..+.++... ..+++
T Consensus 227 ~L~rpfvgiHLRng~DWvraCehikd~~~~hlfASpQClGy~~~~gaLt~e~C~Psk~~I~rqik~~v~s-----i~dak 301 (386)
T KOG3849|consen 227 NLARPFVGIHLRNGADWVRACEHIKDTTNRHLFASPQCLGYGHHLGALTKEICSPSKQQILRQIKEKVGS-----IGDAK 301 (386)
T ss_pred hcCcceeEEEeecCchHHHHHHHhcccCCCccccChhhccccccccccchhhhCccHHHHHHHHHHHHhh-----hcccc
Confidence 3578999999998732 11 1 22233444445555554432 23689
Q ss_pred EEEEEecchhhhhHHHHh--------------hhhhhhhhhccCCchhhhhHhhhhhhHHHHHHHHHhhcCC
Q psy16352 341 RVYVATDDASVLTEIREK--------------SLLHVLGILKARDSFDDWRWKESLDLSDLVQRRLEYLQNP 398 (905)
Q Consensus 341 ri~LaTDd~~vi~Eakek--------------SL~~Dle~L~~~d~~~~wr~~~~~~l~~~vq~~I~~~QNP 398 (905)
.||+|||....++|+.+. .--.|+.+|.+.|-+- ..-....+..+.+.=+.+--|
T Consensus 302 SVfVAsDs~hmi~Eln~aL~~~~i~vh~l~pdd~y~dLaIlGqadhFi---GNCvSsfsafvKRERD~~GrP 370 (386)
T KOG3849|consen 302 SVFVASDSDHMIDELNEALKPYEIEVHRLEPDDMYTDLAILGQADHFI---GNCVSSFSAFVKRERDHAGRP 370 (386)
T ss_pred eEEEeccchhhhHHHHHhhcccceeEEecCcccchhhhhhhcccchhh---hhhHHHHHHHHhhhhcccCCc
Confidence 999999999999999863 2234677788777542 334456777776665544444
No 72
>KOG0197|consensus
Probab=94.94 E-value=0.015 Score=67.89 Aligned_cols=59 Identities=15% Similarity=0.224 Sum_probs=52.7
Q ss_pred hhhheecccCCCCCCCCccccCCCE-EEEeeeeecceecceecCCCceeeccCCCceecc
Q psy16352 803 RRIHIAVLPHTPRHSSEMDLMVGDR-ISVAGNHWNGYSKGRNLRTDQLALYPTFKSVPHV 861 (905)
Q Consensus 803 ~~~~~a~y~y~~~~~dEL~l~~GD~-i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~v~ 861 (905)
...+.|+|+|.++.+++|.|+.||. ..+.+..+-.||.-++.-++..|+.|+|||.+..
T Consensus 11 ~~~~valyd~~s~~~~dLsf~~Gd~~~~~~~~~~~~Ww~ar~~~~~~~g~ip~N~v~~~~ 70 (468)
T KOG0197|consen 11 ETIVVALYDYASRTPEDLSFRKGDVVLILLETTNGDWWRARSLQLGQEGYIPSNYVARNR 70 (468)
T ss_pred cceEEEeccccCCCccccccccCceEEEeeccCChhHHHHHHhhcCCCCcCcCceeeccc
Confidence 3478999999999999999999999 7777777789999998889999999999998763
No 73
>KOG1451|consensus
Probab=94.48 E-value=0.032 Score=65.37 Aligned_cols=59 Identities=20% Similarity=0.200 Sum_probs=52.1
Q ss_pred CCCcccceeeecCCCCCCCCCccccCCcEEEecc-ccccceeeeeecCCCceeeeeCccccc
Q psy16352 732 GGQLSRIHIAVLPHTPRHSSEMALLVGDRISVAG-NHWNGYSKGRNLRTDQLALYPTFKTSA 792 (905)
Q Consensus 732 ~~~~~~~~~v~~~~~~~~~~El~l~~GD~I~~~~-~~~~G~~~G~n~~tg~~GlfP~~~v~~ 792 (905)
+-+.++...++|+.++..+-|++..+|-++..+. ...+||+.|+ .+|++||.|++||++
T Consensus 752 ~~~~~rk~k~lyAc~a~h~selsf~~gt~f~nv~~S~e~Gwl~Gt--LnGktglip~nyve~ 811 (812)
T KOG1451|consen 752 YKYLSRRVKTLYACTADHHSELSFEPGTIFTNVYESNEDGWLVGT--LNGKTGLIPSNYVEP 811 (812)
T ss_pred CccccccccceeccCCCCcccccccCcceeeeecccCCCCceeee--cCCCcccCcccccCc
Confidence 3446777789999999999999999999998855 6889999998 589999999999986
No 74
>KOG1451|consensus
Probab=93.72 E-value=0.043 Score=64.34 Aligned_cols=54 Identities=20% Similarity=0.250 Sum_probs=47.6
Q ss_pred hhheecccCCCCCCCCccccCCCEEEE-eeeeecceecceecCCCceeeccCCCcee
Q psy16352 804 RIHIAVLPHTPRHSSEMDLMVGDRISV-AGNHWNGYSKGRNLRTDQLALYPTFKSVP 859 (905)
Q Consensus 804 ~~~~a~y~y~~~~~dEL~l~~GD~i~v-~~~~~dgw~~G~n~rtg~~GlfP~~~v~~ 859 (905)
+...++|+=+|....|+.+.+|-++.- .+-.++||..|+. +|++||+|+|||.+
T Consensus 757 rk~k~lyAc~a~h~selsf~~gt~f~nv~~S~e~Gwl~GtL--nGktglip~nyve~ 811 (812)
T KOG1451|consen 757 RRVKTLYACTADHHSELSFEPGTIFTNVYESNEDGWLVGTL--NGKTGLIPSNYVEP 811 (812)
T ss_pred ccccceeccCCCCcccccccCcceeeeecccCCCCceeeec--CCCcccCcccccCc
Confidence 456899999999999999999988864 5577899999997 79999999999974
No 75
>KOG3565|consensus
Probab=93.15 E-value=0.047 Score=66.43 Aligned_cols=58 Identities=16% Similarity=0.244 Sum_probs=51.2
Q ss_pred ccceeeecCCCCCCCCCccccCCcEEEe-ccccccceeeeeecCCCceeeeeCcccccC
Q psy16352 736 SRIHIAVLPHTPRHSSEMALLVGDRISV-AGNHWNGYSKGRNLRTDQLALYPTFKTSAD 793 (905)
Q Consensus 736 ~~~~~v~~~~~~~~~~El~l~~GD~I~~-~~~~~~G~~~G~n~~tg~~GlfP~~~v~~~ 793 (905)
.+...|+|.|+++.+++|+|.+|+++.+ ..+..+||.+|.....+..|.+|+.|++..
T Consensus 578 ~~~~~a~~~~~~~s~~~~si~~~~il~~ie~~~g~gwt~~r~~~~~~~g~~Ptsyl~~~ 636 (640)
T KOG3565|consen 578 IRTSKALYAFEGQSEGTISIDPGEILQVIEEDKGDGWTRGRLEPNGEKGYVPTSYLDVT 636 (640)
T ss_pred ccceecccCcCCCCCCccccCcchhHHHHhhcccCCCCCCCCCCCCcCCCCCccccccc
Confidence 4455789999999999999999999988 678999999998777899999999988754
No 76
>KOG4773|consensus
Probab=92.98 E-value=0.013 Score=65.01 Aligned_cols=144 Identities=14% Similarity=0.052 Sum_probs=89.5
Q ss_pred ceeecccccccccccCCCceeeeeehhhHhhhhccCCCCCCCeeecccccccCCCcccceeeecCCCCCCCCCccccCCc
Q psy16352 680 ASDRYRSLDDIYYFGVPTATIWCICRTAYEQMNAKFPDASDRYRSLDDIYYFGGQLSRIHIAVLPHTPRHSSEMALLVGD 759 (905)
Q Consensus 680 ~~~~~~slD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~~~~~~~~v~~~~~~~~~~El~l~~GD 759 (905)
..+-++|+++.==.-+-.+|+ .||++--+-. +-.+.-+. .+|-.+..++++++|+.+...||.|..||
T Consensus 131 ~~fffvsp~D~~dVpeai~r~--~Prt~~~ks~-----~~skasni-----~~~~~~q~~~a~~df~gns~~EL~l~agd 198 (386)
T KOG4773|consen 131 RPFFFVSPYDSEDVPEAIRRL--RPRTRKWKSD-----GVSKASNI-----VLGMAAQRAEASFDFPGNSKLELNLVAGD 198 (386)
T ss_pred eeeeeeccchHhhhhHHHHhc--Cchhhhcccc-----ccCccccc-----cchhhhHHHHhhccCCCCccceeeeehhh
Confidence 445566666653334445566 7887766632 21111111 13344556789999999999999999999
Q ss_pred EEEeccccccceeeeeecCCCceeeeeCcccccCC-CCChhhhhhhhheecccCCCCCCCCc-c-ccCCCEEEEeeeeec
Q psy16352 760 RISVAGNHWNGYSKGRNLRTDQLALYPTFKTSADS-FPAFAYIFRRIHIAVLPHTPRHSSEM-D-LMVGDRISVAGNHWN 836 (905)
Q Consensus 760 ~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~~~-~p~~~~~~~~~~~a~y~y~~~~~dEL-~-l~~GD~i~v~~~~~d 836 (905)
++.+......||+.|+ .-|.+|+||.+|++..- +|. ......|.+ -+|.|-.-+.+ + ..+++ +.++...-+
T Consensus 199 V~~~~~r~ek~W~~gk--~R~~~g~yp~sF~~~ld~fpe-eD~~~nw~r--~pY~~~~v~tv~e~~~~~r-l~~lp~~l~ 272 (386)
T KOG4773|consen 199 VEFLLSRDEKYWLLGK--VRGLTGYYPDSFVKQLDDFPE-EDAGTNWLR--CPYYPGPVSTVKEGIEESR-LEVLPKYLD 272 (386)
T ss_pred HHHHHhhcccceeeee--eccccccccHHhhhhhccCcc-ccCCCCccc--CccccCchHHhhhhhhHhh-hhhhHHhhc
Confidence 9999888888888887 45899999999998664 443 333344444 34444321110 1 11222 445666678
Q ss_pred ceecc
Q psy16352 837 GYSKG 841 (905)
Q Consensus 837 gw~~G 841 (905)
|||.=
T Consensus 273 ~~~~~ 277 (386)
T KOG4773|consen 273 GLEVI 277 (386)
T ss_pred ccccc
Confidence 88764
No 77
>KOG0199|consensus
Probab=92.89 E-value=0.075 Score=64.07 Aligned_cols=50 Identities=20% Similarity=0.242 Sum_probs=41.7
Q ss_pred eeecCCCCCCCCCccccCCcEEEeccccccc-eeeeeecCCCceeeeeCcccc
Q psy16352 740 IAVLPHTPRHSSEMALLVGDRISVAGNHWNG-YSKGRNLRTDQLALYPTFKTS 791 (905)
Q Consensus 740 ~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G-~~~G~n~~tg~~GlfP~~~v~ 791 (905)
+++|+. ..+|-|.|+.||.|.|+.+...| ||+|-|.||++.|.||.+.|.
T Consensus 380 ~~~~d~--~ep~aLh~~kgD~IvVIegs~a~y~WfgQn~Rn~kvG~Fprsvvt 430 (1039)
T KOG0199|consen 380 RETYDS--IEPGALHLTKGDEIVVIEGSGAGYDWFGQNKRNQKVGTFPRSVVT 430 (1039)
T ss_pred eeeccc--cCCCceeeccCCeEEEEecCCccceeeccccccceecccCcceee
Confidence 444544 45689999999999998887777 599999999999999977665
No 78
>KOG3771|consensus
Probab=92.67 E-value=0.057 Score=62.35 Aligned_cols=52 Identities=13% Similarity=-0.060 Sum_probs=36.9
Q ss_pred hhheecccCCCCCCCCccccCCCEEEEeeee-ecceecceecCCCceeeccCCCc
Q psy16352 804 RIHIAVLPHTPRHSSEMDLMVGDRISVAGNH-WNGYSKGRNLRTDQLALYPTFKS 857 (905)
Q Consensus 804 ~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~-~dgw~~G~n~rtg~~GlfP~~~v 857 (905)
-.+.++|+|.+++.|||+++.||.|.|.+-. .+-||.|.. .|..|-+|.+||
T Consensus 401 ~~v~a~~dy~a~~~deLsf~~gd~i~vi~s~~~~e~~eg~~--mg~ke~~~~~~~ 453 (460)
T KOG3771|consen 401 YKVKALHDYAAQDTDELSFEAGDVILVIPSDNPEEQDEGWL--MGVKESDWNGLF 453 (460)
T ss_pred cceeccccccccccccccccCCCEEEEecCCCccchhhHHH--hhhcccccccce
Confidence 4579999999999999999999999997643 233444432 244555554444
No 79
>KOG0609|consensus
Probab=92.51 E-value=0.062 Score=62.98 Aligned_cols=56 Identities=13% Similarity=0.173 Sum_probs=47.3
Q ss_pred hhhheecccCCCCCCCC-------ccccCCCEEEEeeeeecceecceecC---CCceeeccCCCce
Q psy16352 803 RRIHIAVLPHTPRHSSE-------MDLMVGDRISVAGNHWNGYSKGRNLR---TDQLALYPTFKSV 858 (905)
Q Consensus 803 ~~~~~a~y~y~~~~~dE-------L~l~~GD~i~v~~~~~dgw~~G~n~r---tg~~GlfP~~~v~ 858 (905)
...++|+|+|.|..++- |.++.|||++|..+.+..||.++-.. .+..|++|++-..
T Consensus 214 ~~~vra~FdYdP~~D~~IPCkEagl~F~~GDILqIv~qdD~nWWQA~~~~~~~~~~AGLiPS~~~q 279 (542)
T KOG0609|consen 214 VVFVRALFDYDPKEDDLIPCKEAGLPFQRGDILQIVSQDDPNWWQARRVGDPFGGLAGLIPSKELQ 279 (542)
T ss_pred eeeehhhcCcCcccCCcccchhcCCcccccceeeeccCCCcchhhhhcccCccccccccccCHHHH
Confidence 35789999999997654 88999999999999999999987652 4788999998664
No 80
>KOG2222|consensus
Probab=91.92 E-value=0.043 Score=62.75 Aligned_cols=67 Identities=10% Similarity=0.034 Sum_probs=53.5
Q ss_pred hhheecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCceecccCC-CCCCCCCC
Q psy16352 804 RIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVPHVETA-RFPTYPEV 872 (905)
Q Consensus 804 ~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~v~~~~-~~~~~~~~ 872 (905)
+..+|+-+|.-.++|||-++..|+|.++++-++--|.|.. +|..|-||+-||+-+.+-. .|..||.-
T Consensus 549 krakal~df~r~dddelgfrkndiitiisekdehcwvgel--nglrgwfpakfvellder~k~yt~~gdd 616 (848)
T KOG2222|consen 549 KRAKALHDFAREDDDELGFRKNDIITIISEKDEHCWVGEL--NGLRGWFPAKFVELLDERGKLYTIAGDD 616 (848)
T ss_pred HHHHHHhhhhhccccccccccccEEEEeecCCcceeeecc--ccccccchHHHHHHHHhccceeeecccc
Confidence 5678999999999999999999999998776555566653 4999999999998666654 44456654
No 81
>KOG3725|consensus
Probab=91.84 E-value=0.06 Score=57.41 Aligned_cols=54 Identities=17% Similarity=0.111 Sum_probs=47.5
Q ss_pred hhhheecccCCCCCCCCccccCCCEEEEe--eeeecceecceecCCCceeeccCCCce
Q psy16352 803 RRIHIAVLPHTPRHSSEMDLMVGDRISVA--GNHWNGYSKGRNLRTDQLALYPTFKSV 858 (905)
Q Consensus 803 ~~~~~a~y~y~~~~~dEL~l~~GD~i~v~--~~~~dgw~~G~n~rtg~~GlfP~~~v~ 858 (905)
.+..+++|+|.+..+.||+|-..|+|.|. ..++..|..| .|.++.|-.|-.|.+
T Consensus 317 trkArVlyDYdAa~s~ElslladeiitVyslpGMD~dwlmg--ErGnkkGKvPvtYlE 372 (375)
T KOG3725|consen 317 TRKARVLYDYDAALSQELSLLADEIITVYSLPGMDADWLMG--ERGNKKGKVPVTYLE 372 (375)
T ss_pred ccceeeeecccccchhhhhhhhcceEEEEecCCCChHHhhh--hhcCCCCCcchhHHH
Confidence 56789999999999999999999999995 4578999888 468999999998874
No 82
>KOG3771|consensus
Probab=91.70 E-value=0.087 Score=60.87 Aligned_cols=52 Identities=21% Similarity=0.204 Sum_probs=40.9
Q ss_pred ceeeecCCCCCCCCCccccCCcEEEec-----cccccceeeeeecCCCceeeeeCccc
Q psy16352 738 IHIAVLPHTPRHSSEMALLVGDRISVA-----GNHWNGYSKGRNLRTDQLALYPTFKT 790 (905)
Q Consensus 738 ~~~v~~~~~~~~~~El~l~~GD~I~~~-----~~~~~G~~~G~n~~tg~~GlfP~~~v 790 (905)
...++|+|.++..|||++..||+|.|+ ..+|+||.+|..... ..|+||..+.
T Consensus 402 ~v~a~~dy~a~~~deLsf~~gd~i~vi~s~~~~e~~eg~~mg~ke~~-~~~~~~~~~~ 458 (460)
T KOG3771|consen 402 KVKALHDYAAQDTDELSFEAGDVILVIPSDNPEEQDEGWLMGVKESD-WNGLFPLNFT 458 (460)
T ss_pred ceeccccccccccccccccCCCEEEEecCCCccchhhHHHhhhcccc-cccceecccc
Confidence 346899999999999999999999983 347899999864333 2678876654
No 83
>KOG1843|consensus
Probab=91.46 E-value=0.11 Score=58.95 Aligned_cols=52 Identities=17% Similarity=0.294 Sum_probs=42.6
Q ss_pred eeeecCCCCCCCCCccccCCcEEEeccc--cccceeeeeecCCCceeeeeCccccc
Q psy16352 739 HIAVLPHTPRHSSEMALLVGDRISVAGN--HWNGYSKGRNLRTDQLALYPTFKTSA 792 (905)
Q Consensus 739 ~~v~~~~~~~~~~El~l~~GD~I~~~~~--~~~G~~~G~n~~tg~~GlfP~~~v~~ 792 (905)
..++|++..+-...++|++||+|.+... --+-||.|. +.++.||||.++|+.
T Consensus 419 a~a~ysfage~~GDl~f~kgDii~il~ks~s~~dwwtgr--~~~~egifPanyv~~ 472 (473)
T KOG1843|consen 419 ATALYSFAGEQPGDLSFQKGDIITILKKSDSANDWWTGR--GNGYEGIFPANYVSL 472 (473)
T ss_pred eeeeehhccCCCCCcccccCceEEEecCCcchhhHHHhh--ccccccccccceecc
Confidence 4789999999999999999999998543 334566664 678999999999874
No 84
>KOG3725|consensus
Probab=89.78 E-value=0.12 Score=55.17 Aligned_cols=54 Identities=19% Similarity=0.170 Sum_probs=46.0
Q ss_pred ccceeeecCCCCCCCCCccccCCcEEEec--cccccceeeeeecCCCceeeeeCcccc
Q psy16352 736 SRIHIAVLPHTPRHSSEMALLVGDRISVA--GNHWNGYSKGRNLRTDQLALYPTFKTS 791 (905)
Q Consensus 736 ~~~~~v~~~~~~~~~~El~l~~GD~I~~~--~~~~~G~~~G~n~~tg~~GlfP~~~v~ 791 (905)
.+..+|+|+|.+-.+.||+|...|+|.|. .....-|..|+ |.|+.|-+|..|.+
T Consensus 317 trkArVlyDYdAa~s~ElslladeiitVyslpGMD~dwlmgE--rGnkkGKvPvtYlE 372 (375)
T KOG3725|consen 317 TRKARVLYDYDAALSQELSLLADEIITVYSLPGMDADWLMGE--RGNKKGKVPVTYLE 372 (375)
T ss_pred ccceeeeecccccchhhhhhhhcceEEEEecCCCChHHhhhh--hcCCCCCcchhHHH
Confidence 56779999999999999999999999994 44556789987 89999999976654
No 85
>KOG4278|consensus
Probab=88.72 E-value=0.34 Score=57.88 Aligned_cols=68 Identities=15% Similarity=0.222 Sum_probs=54.1
Q ss_pred hhheecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCceecccCCCCCCCCCC
Q psy16352 804 RIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVPHVETARFPTYPEV 872 (905)
Q Consensus 804 ~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~v~~~~~~~~~~~~ 872 (905)
-+..|||+|.+.++.-|+|..||.+.|+....+|=|-..--.+|+ |-.|+||+.+|-.-.++.=|-.+
T Consensus 91 NLFVALYDFvasGdntLSitKGeklRvLGYN~NgEWcEartKNGq-GWVPSNyItPvNSLeKhsWYHGp 158 (1157)
T KOG4278|consen 91 NLFVALYDFVASGDNTLSITKGEKLRVLGYNKNGEWCEARTKNGQ-GWVPSNYITPVNSLEKHSWYHGP 158 (1157)
T ss_pred ceeEeeeeeeccccceeeeecCceEEEeeecCCCcceeecccCCC-ccccccccccccchhhcccccCc
Confidence 367899999999999999999999999998877766554346788 99999999887664444444444
No 86
>KOG3557|consensus
Probab=88.09 E-value=0.2 Score=59.81 Aligned_cols=64 Identities=14% Similarity=0.171 Sum_probs=53.2
Q ss_pred hhhhhhhheecccCCCCCCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCceecccCCCCCC
Q psy16352 799 AYIFRRIHIAVLPHTPRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVPHVETARFPT 868 (905)
Q Consensus 799 ~~~~~~~~~a~y~y~~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~v~~~~~~~~ 868 (905)
.+...+++.++|++.+++..||+...||+++|+..- .+||.=.| +.|+.|..|.| |+++.+.+.
T Consensus 496 ~a~~~k~~~~~Ydf~arNs~ELsV~k~E~LEvl~d~-R~WW~~kn-~~G~~GyvP~n----IL~~~~~~~ 559 (721)
T KOG3557|consen 496 PAQGKKWVLVLYDFQARNSSELSVKKGEVLEVLDDG-RKWWKVKN-GHGRAGYVPSN----ILAPLQPEH 559 (721)
T ss_pred ccccceeeeeehhhhcccchhhhhhhhhhhhhhhcc-ccceeccC-ccCCCCCcchh----hhccCCCcc
Confidence 344567999999999999999999999999998766 88998887 58999999998 455555444
No 87
>KOG4278|consensus
Probab=86.29 E-value=0.52 Score=56.39 Aligned_cols=55 Identities=16% Similarity=0.366 Sum_probs=44.0
Q ss_pred ceeeecCCCCCCCCCccccCCcEEEeccccccc-eeeeeecCCCceeeeeCcccccCC
Q psy16352 738 IHIAVLPHTPRHSSEMALLVGDRISVAGNHWNG-YSKGRNLRTDQLALYPTFKTSADS 794 (905)
Q Consensus 738 ~~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G-~~~G~n~~tg~~GlfP~~~v~~~~ 794 (905)
.-+|||+|.+.++.-|+|.+||.+.|.|-.-|| |.... ..+|+ |.+|++|+.|..
T Consensus 92 LFVALYDFvasGdntLSitKGeklRvLGYN~NgEWcEar-tKNGq-GWVPSNyItPvN 147 (1157)
T KOG4278|consen 92 LFVALYDFVASGDNTLSITKGEKLRVLGYNKNGEWCEAR-TKNGQ-GWVPSNYITPVN 147 (1157)
T ss_pred eeEeeeeeeccccceeeeecCceEEEeeecCCCcceeec-ccCCC-cccccccccccc
Confidence 338999999999999999999999998866666 65543 23454 999999988754
No 88
>KOG0197|consensus
Probab=83.46 E-value=0.52 Score=55.35 Aligned_cols=56 Identities=18% Similarity=0.276 Sum_probs=46.3
Q ss_pred ceeeecCCCCCCCCCccccCCcEEEecccccc-ceeeeeecCCCceeeeeCcccccC
Q psy16352 738 IHIAVLPHTPRHSSEMALLVGDRISVAGNHWN-GYSKGRNLRTDQLALYPTFKTSAD 793 (905)
Q Consensus 738 ~~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~-G~~~G~n~~tg~~GlfP~~~v~~~ 793 (905)
..+|+|+|.+..+++|++..||.+....+..+ .|++-.+..+|..|+.|+++|...
T Consensus 13 ~~valyd~~s~~~~dLsf~~Gd~~~~~~~~~~~~Ww~ar~~~~~~~g~ip~N~v~~~ 69 (468)
T KOG0197|consen 13 IVVALYDYASRTPEDLSFRKGDVVLILLETTNGDWWRARSLQLGQEGYIPSNYVARN 69 (468)
T ss_pred eEEEeccccCCCccccccccCceEEEeeccCChhHHHHHHhhcCCCCcCcCceeecc
Confidence 45899999999999999999999655555444 588877777999999999998854
No 89
>KOG4575|consensus
Probab=81.94 E-value=1.2 Score=53.06 Aligned_cols=56 Identities=20% Similarity=0.141 Sum_probs=44.6
Q ss_pred CcccceeeecCCCCCCCCCccccCCcEEEeccccccceeeeeecC-CCceeeeeCccc
Q psy16352 734 QLSRIHIAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLR-TDQLALYPTFKT 790 (905)
Q Consensus 734 ~~~~~~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~-tg~~GlfP~~~v 790 (905)
|+.-.++|+|....++.+.+-+.-||+|++.. -.+|||.|...| +...|+||++||
T Consensus 6 q~p~~vrA~y~w~ge~eGdl~f~egDlie~tr-I~dgkwwi~lhrNk~~~g~fpsNFv 62 (874)
T KOG4575|consen 6 QLPCMVRALYAWPGEREGDLKFTEGDLIEQTR-IEDGKWWILLHRNKDEDGLFPSNFV 62 (874)
T ss_pred CCCceEEeeccCCCCcccccceecccceeEEe-eccceeeeeeeecccccccCcccce
Confidence 34456789999999999999999999999865 345665555555 677899999998
No 90
>KOG4429|consensus
Probab=76.92 E-value=1.8 Score=47.34 Aligned_cols=102 Identities=13% Similarity=-0.043 Sum_probs=68.5
Q ss_pred ccccccCCCceeeeeehhhHhhhhccCC-CCCCCeeeccccc-ccCCC---cccceeeecCCCCCCCCCccccCCcEEEe
Q psy16352 689 DIYYFGVPTATIWCICRTAYEQMNAKFP-DASDRYRSLDDIY-YFGGQ---LSRIHIAVLPHTPRHSSEMALLVGDRISV 763 (905)
Q Consensus 689 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ld~~~-~~~~~---~~~~~~v~~~~~~~~~~El~l~~GD~I~~ 763 (905)
..|=+-||+-..-++.|-.........| -+|...+|--..= .-||+ -+....++|++++..+|||-+..||++.+
T Consensus 311 fk~kdKeh~hp~t~is~Pfl~dnle~i~p~aSm~aqsapgSpr~a~~aaelek~lcdafYSfqarqddel~~e~gditif 390 (421)
T KOG4429|consen 311 FKIKDKEHGHPMTIISIPFLGDNLELIPPCASMEAQSAPGSPRGAGEAAELEKILCDAFYSFQARQDDELGGEIGDITIF 390 (421)
T ss_pred HhhhccccCCceEEEeeccccccccCCCccccccccCCCCCCCCCccHHHHHHHHhhhhhccccccccccCCcccceeee
Confidence 3455666666666676666554332222 3444444322111 11111 13345789999999999999999999999
Q ss_pred ccccccceeeeeecCCCceeeeeCccccc
Q psy16352 764 AGNHWNGYSKGRNLRTDQLALYPTFKTSA 792 (905)
Q Consensus 764 ~~~~~~G~~~G~n~~tg~~GlfP~~~v~~ 792 (905)
.....+||+.|. ..|..|-||.-+|++
T Consensus 391 ~Ekkeeg~~f~r--l~gd~~hf~Aa~iEe 417 (421)
T KOG4429|consen 391 DEKKEEGPTFCR--LLGDFEHFHAAEIEE 417 (421)
T ss_pred cCcccCCCceee--eccccCCCcHHHHHH
Confidence 999999999987 468899999877664
No 91
>KOG0515|consensus
Probab=76.02 E-value=1.4 Score=51.84 Aligned_cols=50 Identities=14% Similarity=0.144 Sum_probs=36.5
Q ss_pred ceeeecCCCCCCCCCccccCCcEEEecccc----ccceeeeeecCCCceeeeeCccc
Q psy16352 738 IHIAVLPHTPRHSSEMALLVGDRISVAGNH----WNGYSKGRNLRTDQLALYPTFKT 790 (905)
Q Consensus 738 ~~~v~~~~~~~~~~El~l~~GD~I~~~~~~----~~G~~~G~n~~tg~~GlfP~~~v 790 (905)
..-|+|+|.++..|||++..||-++|.... -+=||. . .+|+.|.+|-++.
T Consensus 685 ~vYAlwdYeaqf~DELsf~eGd~lTvirr~d~~eteWWwa-~--lng~eGyVPRnyl 738 (752)
T KOG0515|consen 685 VVYALWDYEAQFEDELSFDEGDELTVIRRDDEVETEWWWA-R--LNGEEGYVPRNYL 738 (752)
T ss_pred eeEEeecccccccccccccCCceeEEEecCCcchhhhhhH-h--hcCcccccchhhh
Confidence 346899999999999999999999994431 122333 2 4678888887653
No 92
>KOG2222|consensus
Probab=74.19 E-value=0.7 Score=53.29 Aligned_cols=74 Identities=14% Similarity=0.139 Sum_probs=57.7
Q ss_pred CCCCCCeeecccccccCCCc--ccceeeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCcccc
Q psy16352 716 PDASDRYRSLDDIYYFGGQL--SRIHIAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTS 791 (905)
Q Consensus 716 ~~~~~~~~~ld~~~~~~~~~--~~~~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~ 791 (905)
.|-|...+.-|.+-+.-|+. .+..+|+.+|...+.+||.++..|+|++....-+--|-|+ .+|-.|.||.-+|+
T Consensus 526 adys~esh~kd~~nfik~~r~~~krakal~df~r~dddelgfrkndiitiisekdehcwvge--lnglrgwfpakfve 601 (848)
T KOG2222|consen 526 ADYSPESHAKDHANFIKGARTGAKRAKALHDFAREDDDELGFRKNDIITIISEKDEHCWVGE--LNGLRGWFPAKFVE 601 (848)
T ss_pred ccCCchhhhhhHHHHhhhhhhhhHHHHHHhhhhhccccccccccccEEEEeecCCcceeeec--cccccccchHHHHH
Confidence 56677777888777777764 4455789999999999999999999999665444444455 46889999998877
No 93
>smart00743 Agenet Tudor-like domain present in plant sequences. Domain in plant sequences with possible chromatin-associated functions.
Probab=57.56 E-value=7.9 Score=32.45 Aligned_cols=23 Identities=22% Similarity=0.323 Sum_probs=20.5
Q ss_pred cccCCCEEEEeeeeecceeccee
Q psy16352 821 DLMVGDRISVAGNHWNGYSKGRN 843 (905)
Q Consensus 821 ~l~~GD~i~v~~~~~dgw~~G~n 843 (905)
.+++||.|.+....+++||.|+-
T Consensus 2 ~~~~G~~Ve~~~~~~~~W~~a~V 24 (61)
T smart00743 2 DFKKGDRVEVFSKEEDSWWEAVV 24 (61)
T ss_pred CcCCCCEEEEEECCCCEEEEEEE
Confidence 57899999999878999999975
No 94
>PRK15175 Vi polysaccharide export protein VexA; Provisional
Probab=54.81 E-value=16 Score=41.97 Aligned_cols=85 Identities=12% Similarity=0.077 Sum_probs=52.0
Q ss_pred CCccccCCcEEEeccccccceeeeeecCCCceeeeeCcccccC---------------CCCC-----h--hhh---hhhh
Q psy16352 751 SEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSAD---------------SFPA-----F--AYI---FRRI 805 (905)
Q Consensus 751 ~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~~---------------~~p~-----~--~~~---~~~~ 805 (905)
..+.|++||+|.|......=|..|. .|+.|.||-.+-... .-|. + +.. ....
T Consensus 222 ~ni~L~~GDvI~V~~~~~~v~V~Ga---vg~p~~~~~~~~~lTL~eALa~aGGl~~~~Ad~~~V~V~R~~~~~~~~~~~~ 298 (355)
T PRK15175 222 LDIALQPDDRITLRQVTEYVNVLGA---AGVQGKHALVQRHSSVVDALALAKGLNDNLADPQAIFLYKHNEAEQAKQQMR 298 (355)
T ss_pred CCcEeCCCCEEEEccCCCEEEEEEe---ecCccccccCCCCCCHHHHHHHcCCCCccccCccceEEEEccCCcccccccC
Confidence 3689999999999765555567886 677787763221100 0111 0 000 0011
Q ss_pred heecccCCCCCC------CCccccCCCEEEEeeeeecce
Q psy16352 806 HIAVLPHTPRHS------SEMDLMVGDRISVAGNHWNGY 838 (905)
Q Consensus 806 ~~a~y~y~~~~~------dEL~l~~GD~i~v~~~~~dgw 838 (905)
...+|.....+. ...+|++||+|.|.+.----|
T Consensus 299 ~~~Vy~lDl~~p~~~flA~~F~l~~~DvVyV~~a~~~~~ 337 (355)
T PRK15175 299 KLNIYHVDMSQPNSVFLAQAIRVDNGDVIYISNASLTDF 337 (355)
T ss_pred CCeEEEecCCCcchhhHhhCCcCCCCCEEEEcCCchHHH
Confidence 346787766644 456999999999987765555
No 95
>KOG3557|consensus
Probab=52.18 E-value=6.3 Score=47.66 Aligned_cols=60 Identities=17% Similarity=0.169 Sum_probs=46.9
Q ss_pred CCCcccceeeecCCCCCCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCcccccC
Q psy16352 732 GGQLSRIHIAVLPHTPRHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTSAD 793 (905)
Q Consensus 732 ~~~~~~~~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~~~ 793 (905)
-++..+..+++|++.+.++.||++..||++.|.- +..+||+-+| .-|+.|.+|.+-..+.
T Consensus 496 ~a~~~k~~~~~Ydf~arNs~ELsV~k~E~LEvl~-d~R~WW~~kn-~~G~~GyvP~nIL~~~ 555 (721)
T KOG3557|consen 496 PAQGKKWVLVLYDFQARNSSELSVKKGEVLEVLD-DGRKWWKVKN-GHGRAGYVPSNILAPL 555 (721)
T ss_pred ccccceeeeeehhhhcccchhhhhhhhhhhhhhh-ccccceeccC-ccCCCCCcchhhhccC
Confidence 3455557789999999999999999999998854 3445666665 5789999998876643
No 96
>COG0761 lytB 4-Hydroxy-3-methylbut-2-enyl diphosphate reductase IspH [Lipid metabolism]
Probab=49.80 E-value=28 Score=38.75 Aligned_cols=88 Identities=18% Similarity=0.218 Sum_probs=51.8
Q ss_pred CCHHHHHHHHhhCCCcEEEcCCcccccccccccchhhhhhHHHHHHHHHhcCCeEE--E-cccCcHhHHHHHHHhccCCC
Q psy16352 603 DDASVLTEIREKYPQYSVLGDPSIARTASLEHRYLKSSLLGIITDLHYLSNCDHLV--C-TFSSQICRTAYEQMNAKFPD 679 (905)
Q Consensus 603 DDp~Vi~e~k~~yp~y~~i~~~~~~~~a~~~~R~s~~~l~~~l~Dl~lLs~cD~~V--g-T~SSnv~RLa~eLrqt~~~d 679 (905)
|-.++++.++.+||+........+ -...+.| +.++..+ +-+||++| | .-|||--||+..= +..+.+
T Consensus 172 dt~~Iv~~l~~r~p~~~~~~~~~I--CyAT~nR--Q~Avk~l------a~~~Dl~iVVG~~nSSNs~rL~eiA-~~~g~~ 240 (294)
T COG0761 172 DTAEIVAALKERFPKIEVPPFNDI--CYATQNR--QDAVKEL------APEVDLVIVVGSKNSSNSNRLAEIA-KRHGKP 240 (294)
T ss_pred HHHHHHHHHHHhCccccCCccccc--chhhhhH--HHHHHHH------hhcCCEEEEECCCCCccHHHHHHHH-HHhCCC
Confidence 446678889999997422221111 0013334 2344333 77899754 4 4457777765443 333222
Q ss_pred --ceeecccccccccccCCCceeeee
Q psy16352 680 --ASDRYRSLDDIYYFGVPTATIWCI 703 (905)
Q Consensus 680 --~~~~~~slD~~~~~~~~~~~~~~~ 703 (905)
-++....||.+||.| -.+|||.
T Consensus 241 aylId~~~ei~~~w~~~--~~~VGvT 264 (294)
T COG0761 241 AYLIDDAEEIDPEWLKG--VKTVGVT 264 (294)
T ss_pred eEEeCChHhCCHHHhcC--ccEEEEe
Confidence 355677899999999 7899964
No 97
>KOG3812|consensus
Probab=47.18 E-value=9.4 Score=42.90 Aligned_cols=42 Identities=14% Similarity=0.269 Sum_probs=34.5
Q ss_pred CCCCCCccccCCCEEEEeeeeecceecceecCC-CceeeccCC
Q psy16352 814 PRHSSEMDLMVGDRISVAGNHWNGYSKGRNLRT-DQLALYPTF 855 (905)
Q Consensus 814 ~~~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rt-g~~GlfP~~ 855 (905)
|-...-+++++-|-|-+-++.++.||-|+..+. +..|+.|+-
T Consensus 76 Pv~g~aisF~~kDFlHIkeKynnDWWIGRlVkeg~e~gFiPsp 118 (475)
T KOG3812|consen 76 PVQGHAISFEAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSP 118 (475)
T ss_pred CCCCceeeeccccceeehhhcccchhHHHHhhcCCccccccch
Confidence 334445899999999999999999999997754 568999874
No 98
>KOG0609|consensus
Probab=42.25 E-value=14 Score=44.15 Aligned_cols=51 Identities=18% Similarity=0.327 Sum_probs=38.5
Q ss_pred eeecCCCCCCC-------CCccccCCcEEEe----ccccccceeeeeecCCCceeeeeCcccc
Q psy16352 740 IAVLPHTPRHS-------SEMALLVGDRISV----AGNHWNGYSKGRNLRTDQLALYPTFKTS 791 (905)
Q Consensus 740 ~v~~~~~~~~~-------~El~l~~GD~I~~----~~~~~~G~~~G~n~~tg~~GlfP~~~v~ 791 (905)
+|+|+|+|..+ .-|+++.||++.+ +.|||-++--|.- -.+..|++|+.-.+
T Consensus 218 ra~FdYdP~~D~~IPCkEagl~F~~GDILqIv~qdD~nWWQA~~~~~~-~~~~AGLiPS~~~q 279 (542)
T KOG0609|consen 218 RALFDYDPKEDDLIPCKEAGLPFQRGDILQIVSQDDPNWWQARRVGDP-FGGLAGLIPSKELQ 279 (542)
T ss_pred hhhcCcCcccCCcccchhcCCcccccceeeeccCCCcchhhhhcccCc-cccccccccCHHHH
Confidence 78999998853 5678999999998 5568877766531 24678999996544
No 99
>PF11302 DUF3104: Protein of unknown function (DUF3104); InterPro: IPR021453 This family of proteins with unknown function appears to be restricted to Cyanobacteria.
Probab=41.88 E-value=17 Score=32.58 Aligned_cols=24 Identities=17% Similarity=0.289 Sum_probs=19.5
Q ss_pred ccccCCCEEEEeeee------ecceeccee
Q psy16352 820 MDLMVGDRISVAGNH------WNGYSKGRN 843 (905)
Q Consensus 820 L~l~~GD~i~v~~~~------~dgw~~G~n 843 (905)
|.+|+||.|.|.... ++.||.|--
T Consensus 4 L~Vk~Gd~ViV~~~~~~~~~~~~dWWmg~V 33 (75)
T PF11302_consen 4 LSVKPGDTVIVQDEQEVGQKQDKDWWMGQV 33 (75)
T ss_pred cccCCCCEEEEecCccccccCCCCcEEEEE
Confidence 788999999996554 678999964
No 100
>PHA01750 hypothetical protein
Probab=39.51 E-value=1.1e+02 Score=26.68 Aligned_cols=46 Identities=33% Similarity=0.468 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHhhhhhhhccCchhhhHHHHHHHHhhHHHHH
Q psy16352 50 YELARKRVSKDVQELWYYVSSELTQFRTELVNKTPQLAGKLDRIIAETAEHKR 102 (905)
Q Consensus 50 ~e~~rr~~~~~~~e~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 102 (905)
|=.++.++++.++|+ +++||..|++.+. ++..+.+.+-..+.+.++
T Consensus 25 YlKIKq~lkdAvkeI---V~~ELdNL~~ei~----~~kikqDnl~~qv~eik~ 70 (75)
T PHA01750 25 YLKIKQALKDAVKEI---VNSELDNLKTEIE----ELKIKQDELSRQVEEIKR 70 (75)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHH----HHHHhHHHHHHHHHHHHH
Confidence 667888999999987 5789999877643 333445554444434443
No 101
>PF03894 XFP: D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase; InterPro: IPR005593 Phosphoketolases (PK) are key enzymes of the pentose phosphate pathway of heterofermentative and facultative homofermentative lactic acid bacteria and of the D-fructose 6-phosphate shunt of bifidobacteria. PK activity has been sporadically reported in other microorganisms including eukaryotic yeasts. Xylulose-5-phosphate/fructose-6-phosphate phosphoketolase is a thiamine diphosphate (ThdP)-dependent enzyme found in bacteria such as Bifidobacterium sp [, ]. This enzyme has dual-specificity with the following catalytic activities: 4.1.2.9 from EC: xylose 5-P + Pi = acetyl-P + glyeraldehyde-3-P 4.1.2.22 from EC: fructose-6-P + Pi = acetyl-P + erythrose-4-P Phosphoketolases are distantly related to transketolases, e.g. IPR005475 from INTERPRO.; GO: 0016832 aldehyde-lyase activity, 0005975 carbohydrate metabolic process; PDB: 3AI7_B 3AHC_A 3AHJ_A 3AHG_A 3AHE_A 3AHI_A 3AHD_A 3AHF_A 3AHH_A.
Probab=38.72 E-value=7.2 Score=40.34 Aligned_cols=45 Identities=22% Similarity=0.363 Sum_probs=28.6
Q ss_pred CCCCCCCCccccCCCEEEEeeee-ecceecceecCCCceeeccCCCc
Q psy16352 812 HTPRHSSEMDLMVGDRISVAGNH-WNGYSKGRNLRTDQLALYPTFKS 857 (905)
Q Consensus 812 y~~~~~dEL~l~~GD~i~v~~~~-~dgw~~G~n~rtg~~GlfP~~~v 857 (905)
..+.++|+..-.-|=+|+++++. -.||-.|+.+ ||.+|+|+++=.
T Consensus 47 ~~~~~~~~~~~~~G~V~e~LSEh~c~G~leGY~L-tGrhglf~sYEA 92 (179)
T PF03894_consen 47 ILPPDDDEHLAPGGRVMEVLSEHQCQGWLEGYLL-TGRHGLFASYEA 92 (179)
T ss_dssp ---TTT-TTEESS-SEEE-S-HHHHHHHHHHHHH-TT-EEEEEEEGG
T ss_pred cCCCcchhhcccCCeeeeecCHHHHHHHHHHHHh-cCCcccccccch
Confidence 33444566666679999997664 6899999964 999999998743
No 102
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=38.56 E-value=3.2e+02 Score=27.93 Aligned_cols=98 Identities=16% Similarity=0.157 Sum_probs=64.5
Q ss_pred CcceEEEEcCCHHHHHH----HHhhCCCcEEEcCCcccccccccccchhhhhhHHHHHHHHHhcCCeEEEcccCcH-hHH
Q psy16352 594 DVKRVYVATDDASVLTE----IREKYPQYSVLGDPSIARTASLEHRYLKSSLLGIITDLHYLSNCDHLVCTFSSQI-CRT 668 (905)
Q Consensus 594 ~~~~IfLATDDp~Vi~e----~k~~yp~y~~i~~~~~~~~a~~~~R~s~~~l~~~l~Dl~lLs~cD~~VgT~SSnv-~RL 668 (905)
...+|||...++++.++ +++.||+..+++..... . ...-...+++..-.+..|.++..+++-- =+.
T Consensus 47 ~~~~ifllG~~~~~~~~~~~~l~~~yP~l~ivg~~~g~----f-----~~~~~~~i~~~I~~~~pdiv~vglG~PkQE~~ 117 (172)
T PF03808_consen 47 RGKRIFLLGGSEEVLEKAAANLRRRYPGLRIVGYHHGY----F-----DEEEEEAIINRINASGPDIVFVGLGAPKQERW 117 (172)
T ss_pred cCCeEEEEeCCHHHHHHHHHHHHHHCCCeEEEEecCCC----C-----ChhhHHHHHHHHHHcCCCEEEEECCCCHHHHH
Confidence 34699999999999985 46789999888643211 1 1122334555556789999988887765 467
Q ss_pred HHHHHhccCCCceeecccccccccccCCCceeeeeehhhHhhhhccCCCCCC
Q psy16352 669 AYEQMNAKFPDASDRYRSLDDIYYFGVPTATIWCICRTAYEQMNAKFPDASD 720 (905)
Q Consensus 669 a~eLrqt~~~d~~~~~~slD~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 720 (905)
+++.++.+. ..|++-|=++++..-...+.|+.
T Consensus 118 ~~~~~~~l~--------------------~~v~i~vG~~~d~~aG~~~raP~ 149 (172)
T PF03808_consen 118 IARHRQRLP--------------------AGVIIGVGGAFDFLAGKVKRAPK 149 (172)
T ss_pred HHHHHHHCC--------------------CCEEEEECchhhhhccCcCccCH
Confidence 777887775 33666666666654444444443
No 103
>smart00287 SH3b Bacterial SH3 domain homologues.
Probab=37.39 E-value=36 Score=28.26 Aligned_cols=37 Identities=22% Similarity=0.322 Sum_probs=28.1
Q ss_pred cccCCCEEEEeeeeecceecceecCCCceeeccCCCce
Q psy16352 821 DLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSV 858 (905)
Q Consensus 821 ~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~ 858 (905)
.|..|+.|.+.....+||+. .....|..|..|+.++.
T Consensus 26 ~l~~g~~v~i~~~~~~~W~~-v~~~~g~~Gwi~~~~~~ 62 (63)
T smart00287 26 TLKKGDKVKVLGVDGQDWAK-ITYGSGQRGYVPGYVVN 62 (63)
T ss_pred EecCCCEEEEEEccCCceEE-EEcCCCCEEEEEeeeec
Confidence 47799999999987669965 22335899999887763
No 104
>cd02515 Glyco_transf_6 Glycosyltransferase family 6 comprises enzymes responsible for the production of the human ABO blood group antigens. Glycosyltransferase family 6, GT_6, comprises enzymes with three known activities: alpha-1,3-galactosyltransferase, alpha-1,3 N-acetylgalactosaminyltransferase, and alpha-galactosyltransferase. UDP-galactose:beta-galactosyl alpha-1,3-galactosyltransferase (alpha3GT) catalyzes the transfer of galactose from UDP-alpha-d-galactose into an alpha-1,3 linkage with beta-galactosyl groups in glycoconjugates. The enzyme exists in most mammalian species but is absent from humans, apes, and old world monkeys as a result of the mutational inactivation of the gene. The alpha-1,3 N-acetylgalactosaminyltransferase and alpha-galactosyltransferase are responsible for the production of the human ABO blood group antigens. A N-acetylgalactosaminyltransferases use a UDP-GalNAc donor to convert the H-antigen acceptor to the A antigen, whereas a galactosyltransferase use
Probab=33.63 E-value=96 Score=34.39 Aligned_cols=107 Identities=17% Similarity=0.201 Sum_probs=56.8
Q ss_pred CCcceeEEecCCCCCccccccChHHHHHHHHHHHHHHhccCC-CCcceEEEEcCCHHHHHHHHhhCCC--cEEEcCCccc
Q psy16352 551 KPIVGIHIRRTDKVDTEAALHPVEEYMTGVEEYYKQLALTQT-VDVKRVYVATDDASVLTEIREKYPQ--YSVLGDPSIA 627 (905)
Q Consensus 551 ~PiVGVHIRrgDK~~~Ea~~~~l~eYm~~ve~~~~~~~~~~~-~~~~~IfLATDDp~Vi~e~k~~yp~--y~~i~~~~~~ 627 (905)
.-+||+=|=-+ -.|..-.+.|++..++..- .-...-||-||++..+.+.+ .-|. ..++.-.+
T Consensus 33 n~tIgl~vfat------------GkY~~f~~~F~~SAEk~Fm~g~~v~YyVFTD~~~~~p~v~-lg~~r~~~V~~v~~-- 97 (271)
T cd02515 33 NITIGLTVFAV------------GKYTEFLERFLESAEKHFMVGYRVIYYIFTDKPAAVPEVE-LGPGRRLTVLKIAE-- 97 (271)
T ss_pred CCEEEEEEEEe------------ccHHHHHHHHHHHHHHhccCCCeeEEEEEeCCcccCcccc-cCCCceeEEEEecc--
Confidence 44677655444 3455555566655443322 34578899999998866543 1122 22222211
Q ss_pred ccccccccchhhhhhH--HH---HHHHHHhcCCeEEE-----cccCcHh-HHHHHHHhccC
Q psy16352 628 RTASLEHRYLKSSLLG--II---TDLHYLSNCDHLVC-----TFSSQIC-RTAYEQMNAKF 677 (905)
Q Consensus 628 ~~a~~~~R~s~~~l~~--~l---~Dl~lLs~cD~~Vg-----T~SSnv~-RLa~eLrqt~~ 677 (905)
..|....+|.. ++ ++=.++.++||+.| -|.+.|| ..+.+|-.++|
T Consensus 98 -----~~~W~~~sl~Rm~~~~~~~~~~~~~e~DYlF~~dvd~~F~~~ig~E~Lg~lva~lH 153 (271)
T cd02515 98 -----ESRWQDISMRRMKTLADHIADRIGHEVDYLFCMDVDMVFQGPFGVETLGDSVAQLH 153 (271)
T ss_pred -----ccCCcHHHHHHHHHHHHHHHHhhcccCCEEEEeeCCceEeecCCHHHhhhhheecC
Confidence 11222233322 33 33345789999999 4667776 33344555555
No 105
>KOG4384|consensus
Probab=30.71 E-value=32 Score=39.17 Aligned_cols=57 Identities=14% Similarity=0.099 Sum_probs=46.4
Q ss_pred eecccCCCC--CCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCceecccCCC
Q psy16352 807 IAVLPHTPR--HSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVPHVETAR 865 (905)
Q Consensus 807 ~a~y~y~~~--~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~v~~~~~ 865 (905)
++.=+++|. +.|||-++.||+|.+.++--=|-|.|.. .++.|.|+--||..+.+...
T Consensus 140 ~~~t~~tp~p~~~d~lk~~~~~~i~~~~~~~~~~~~g~~--~~kv~~f~~~~v~~~s~e~~ 198 (361)
T KOG4384|consen 140 RVHTDFTPSPYDTDSLKIKKGDIIDIIEKPPMGTWLGLL--NNKVGSFKFIYVDVISEEEP 198 (361)
T ss_pred cccccCCCCcccccchhhcccchhhccccCccccccccc--cCcccccccceecccccccc
Confidence 444444444 8899999999999999999999999876 69999999999987666543
No 106
>PF14603 hSH3: Helically-extended SH3 domain; PDB: 1RI9_A.
Probab=30.68 E-value=68 Score=29.63 Aligned_cols=61 Identities=8% Similarity=0.111 Sum_probs=29.3
Q ss_pred cccCCCcccceeeecCCCC----CCCCCccccCCcEEEeccccccceeeeeecCCCceeeeeCccc
Q psy16352 729 YYFGGQLSRIHIAVLPHTP----RHSSEMALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKT 790 (905)
Q Consensus 729 ~~~~~~~~~~~~v~~~~~~----~~~~El~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v 790 (905)
|.|.|...-.+.+.-+++. .+...|.|++|+++.|......+-+-..| .-||.|.+|....
T Consensus 5 FKydgeI~VL~~~~V~~~~~~kk~G~kDLpi~~GE~LeVI~~t~~~kvlCRN-~~GKYGYV~~~~L 69 (89)
T PF14603_consen 5 FKYDGEIRVLYTMMVDPNLKSKKWGGKDLPIKPGEILEVIQFTDDNKVLCRN-SEGKYGYVLRSHL 69 (89)
T ss_dssp T---S----SS--B--TTS-SS---TTB----TT-B-EEEEESSSSEEEEEE-TTTEEEEEEGGGS
T ss_pred cccCceEEEEEEEEEccCcccccCCcccCCcCCCCEEEEEEeCCCCeEEEeC-CCCceeEEEHHHc
Confidence 3455554444444333332 25689999999999998776666555566 4799999997554
No 107
>COG1083 NeuA CMP-N-acetylneuraminic acid synthetase [Cell envelope biogenesis, outer membrane]
Probab=28.71 E-value=2.6e+02 Score=30.28 Aligned_cols=77 Identities=18% Similarity=0.197 Sum_probs=48.2
Q ss_pred CCcceEEEEcCCHHHHHHHHhhCCCcEEEcCCcccccccccccchhhhhhHHHHHHHHHhcC-CeEEEcccCcHhHHHHH
Q psy16352 593 VDVKRVYVATDDASVLTEIREKYPQYSVLGDPSIARTASLEHRYLKSSLLGIITDLHYLSNC-DHLVCTFSSQICRTAYE 671 (905)
Q Consensus 593 ~~~~~IfLATDDp~Vi~e~k~~yp~y~~i~~~~~~~~a~~~~R~s~~~l~~~l~Dl~lLs~c-D~~VgT~SSnv~RLa~e 671 (905)
.....|+|+||++++++++++ |+--.|+..|. .++.-.+ +.+..++--+..+-.+ |.++|...++.=|-...
T Consensus 42 ~~fd~VviSsDs~~Il~~A~~-ygak~~~~Rp~-----~LA~D~a-st~~~~lh~le~~~~~~~~~~lLq~TsPLl~~~~ 114 (228)
T COG1083 42 KLFDKVVISSDSEEILEEAKK-YGAKVFLKRPK-----ELASDRA-STIDAALHALESFNIDEDTLILLQPTSPLLTSLH 114 (228)
T ss_pred CccceEEEcCCcHHHHHHHHH-hCccccccCCh-----hhccCch-hHHHHHHHHHHHhccccCeeEEeccCccccchhH
Confidence 457899999999999999996 43322333332 2322211 2223444444444444 67899888888777777
Q ss_pred HHhcc
Q psy16352 672 QMNAK 676 (905)
Q Consensus 672 Lrqt~ 676 (905)
++++.
T Consensus 115 ik~A~ 119 (228)
T COG1083 115 IKEAF 119 (228)
T ss_pred HHHHH
Confidence 77665
No 108
>KOG3416|consensus
Probab=26.83 E-value=33 Score=33.65 Aligned_cols=31 Identities=16% Similarity=0.070 Sum_probs=24.9
Q ss_pred cccCCCEEEEeeeeecceecceecCCCceee
Q psy16352 821 DLMVGDRISVAGNHWNGYSKGRNLRTDQLAL 851 (905)
Q Consensus 821 ~l~~GD~i~v~~~~~dgw~~G~n~rtg~~Gl 851 (905)
.++|||+|.....+..=|=+|..+++|+.|=
T Consensus 61 ~~~PGDIirLt~Gy~Si~qg~LtL~~GK~Ge 91 (134)
T KOG3416|consen 61 LIQPGDIIRLTGGYASIFQGCLTLYVGKGGE 91 (134)
T ss_pred ccCCccEEEecccchhhhcCceEEEecCCce
Confidence 4899999999888877776677788887764
No 109
>PF08239 SH3_3: Bacterial SH3 domain; InterPro: IPR013247 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]. They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. A homologue of the SH3 domain has been found in a number of different bacterial proteins including glycyl-glycine endopeptidase, bacteriocin and some hypothetical proteins.; PDB: 3PVQ_B 3NPF_B 3H41_A 2KQ8_A 2KRS_A 2KYB_A 2KT8_A.
Probab=26.67 E-value=67 Score=25.94 Aligned_cols=37 Identities=19% Similarity=0.257 Sum_probs=28.1
Q ss_pred cccCCCEEEEeeeeecc-eecceecCCCceeeccCCCce
Q psy16352 821 DLMVGDRISVAGNHWNG-YSKGRNLRTDQLALYPTFKSV 858 (905)
Q Consensus 821 ~l~~GD~i~v~~~~~dg-w~~G~n~rtg~~GlfP~~~v~ 858 (905)
.|..|+.|.|.....++ |+.=. ...|..|..++.|++
T Consensus 18 ~l~~g~~v~v~~~~~~~~W~~V~-~~~g~~GwV~~~~l~ 55 (55)
T PF08239_consen 18 QLPKGEKVTVLGESGDGNWYKVR-TYDGKTGWVSSSYLS 55 (55)
T ss_dssp EEETTSEEEEEEEETT--EEEEE-EETTEEEEEEGGCEE
T ss_pred EEeCCCEEEEEEEcCCcEEEEEE-CcCCcEEEEEccccC
Confidence 46899999999999776 86542 236889999998874
No 110
>PF15036 IL34: Interleukin 34; PDB: 4DKF_A 4DKE_A 4DKC_A 4DKD_A 4EXN_A 4EXP_A.
Probab=26.21 E-value=1.5e+02 Score=30.17 Aligned_cols=59 Identities=34% Similarity=0.528 Sum_probs=37.9
Q ss_pred HHHhhhh-hhhhHhhhhhhhhhhhhhccccccccccCCCCChhHHHHHHHHHHhHHHHHHHHHHHHhhhhhh
Q psy16352 8 LARKRVS-KDVQELWYYVSSELTQFRTELVNKTPQLAGGPNIQYELARKRVSKDVQELWYYVSSELTQFRTE 78 (905)
Q Consensus 8 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~rr~~~~~~~e~~~~~~~~l~~~~~~ 78 (905)
|-|.+|| .|.|-||.+||.+-+..- -.-.+-+-||+.|= .+++.|+..++..+.+-+.+
T Consensus 58 Lq~a~Vs~~~LryLW~~Vsl~a~e~V-----q~VLle~HPSwkYl-------~Ev~~Ll~~v~~~~~~~~~~ 117 (169)
T PF15036_consen 58 LQRARVSERELRYLWVLVSLSATESV-----QEVLLEGHPSWKYL-------QEVQTLLLDVQQGLKEYRQS 117 (169)
T ss_dssp HHCTT--HHHHHHHHHHHHHHHHHHH-----HTTS-TTSTTHHHH-------HHHHHHHHHHHHTTT-----
T ss_pred HHhcccCHHHHHHHHHHhhHHHHHHH-----HHHHhccCCcHHHH-------HHHHHHHHHHHHhccccccc
Confidence 4566776 478999999998766432 22345567999883 46788999999999875444
No 111
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=24.93 E-value=2.4e+02 Score=28.77 Aligned_cols=73 Identities=16% Similarity=0.133 Sum_probs=48.1
Q ss_pred cceEEEEcCCHHHHHH----HHhhCCCcEEEcCCcccccccccccchhhhhhHHHHHHHHHhcCCeEEEcccCcHh-HHH
Q psy16352 595 VKRVYVATDDASVLTE----IREKYPQYSVLGDPSIARTASLEHRYLKSSLLGIITDLHYLSNCDHLVCTFSSQIC-RTA 669 (905)
Q Consensus 595 ~~~IfLATDDp~Vi~e----~k~~yp~y~~i~~~~~~~~a~~~~R~s~~~l~~~l~Dl~lLs~cD~~VgT~SSnv~-RLa 669 (905)
..+|||....+++.++ +++.||+..+++..... .. . .....+++..--+..|+++..+++=-- ..+
T Consensus 46 ~~~v~llG~~~~~~~~~~~~l~~~yp~l~i~g~~~g~----~~--~---~~~~~i~~~I~~~~pdiv~vglG~PkQE~~~ 116 (171)
T cd06533 46 GLRVFLLGAKPEVLEKAAERLRARYPGLKIVGYHHGY----FG--P---EEEEEIIERINASGADILFVGLGAPKQELWI 116 (171)
T ss_pred CCeEEEECCCHHHHHHHHHHHHHHCCCcEEEEecCCC----CC--h---hhHHHHHHHHHHcCCCEEEEECCCCHHHHHH
Confidence 5799999999999987 46789999888732111 11 0 111125666667889999998877543 344
Q ss_pred HHHHhcc
Q psy16352 670 YEQMNAK 676 (905)
Q Consensus 670 ~eLrqt~ 676 (905)
...++..
T Consensus 117 ~~~~~~l 123 (171)
T cd06533 117 ARHKDRL 123 (171)
T ss_pred HHHHHHC
Confidence 5555554
No 112
>smart00287 SH3b Bacterial SH3 domain homologues.
Probab=24.38 E-value=98 Score=25.56 Aligned_cols=38 Identities=21% Similarity=0.281 Sum_probs=28.6
Q ss_pred ccccCCcEEEeccccccceeeeeecCCCceeeeeCcccc
Q psy16352 753 MALLVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKTS 791 (905)
Q Consensus 753 l~l~~GD~I~~~~~~~~G~~~G~n~~tg~~GlfP~~~v~ 791 (905)
-.|..|+.|.+.+...+||++... ..|+.|..|++++.
T Consensus 25 ~~l~~g~~v~i~~~~~~~W~~v~~-~~g~~Gwi~~~~~~ 62 (63)
T smart00287 25 GTLKKGDKVKVLGVDGQDWAKITY-GSGQRGYVPGYVVN 62 (63)
T ss_pred EEecCCCEEEEEEccCCceEEEEc-CCCCEEEEEeeeec
Confidence 347899999997765558998652 35899999987764
No 113
>COG0595 mRNA degradation ribonucleases J1/J2 (metallo-beta-lactamase superfamily) [Translation, ribosomal structure and biogenesis; Replication, recombination and repair]
Probab=24.16 E-value=3.2e+02 Score=33.57 Aligned_cols=52 Identities=17% Similarity=0.045 Sum_probs=42.1
Q ss_pred hhhHHHHHHHHHhcCCeEEEcccCcHhHHHHHHHhccCCCceeecccccccccccCCCceeeeeehhhHh
Q psy16352 640 SLLGIITDLHYLSNCDHLVCTFSSQICRTAYEQMNAKFPDASDRYRSLDDIYYFGVPTATIWCICRTAYE 709 (905)
Q Consensus 640 ~l~~~l~Dl~lLs~cD~~VgT~SSnv~RLa~eLrqt~~~d~~~~~~slD~~~~~~~~~~~~~~~~~~~~~ 709 (905)
.....+.|+..-++--.+|.||+||+.|+=..+.-+.. .+|.|-+..||++-
T Consensus 213 ~v~~~l~~i~~~a~grVIv~tfaSni~Ri~~i~~~A~~------------------~gR~vvv~GrSm~~ 264 (555)
T COG0595 213 EVGENLEDIIRNAKGRVIVTTFASNIERIQTIIDAAEK------------------LGRKVVVTGRSMER 264 (555)
T ss_pred HHHHHHHHHHHhCCCcEEEEEchhhHHHHHHHHHHHHH------------------cCCeEEEEcHhHHH
Confidence 34446666666566669999999999999999887776 78999999999887
No 114
>PF14603 hSH3: Helically-extended SH3 domain; PDB: 1RI9_A.
Probab=24.05 E-value=60 Score=30.01 Aligned_cols=43 Identities=12% Similarity=0.093 Sum_probs=30.1
Q ss_pred CCCCccccCCCEEEEeeeeecceecceecCCCceeeccCCCcee
Q psy16352 816 HSSEMDLMVGDRISVAGNHWNGYSKGRNLRTDQLALYPTFKSVP 859 (905)
Q Consensus 816 ~~dEL~l~~GD~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v~~ 859 (905)
+.-+|.+++|+++.|+..-+++=|-.+|. -|+.|..|.+++.+
T Consensus 29 G~kDLpi~~GE~LeVI~~t~~~kvlCRN~-~GKYGYV~~~~L~~ 71 (89)
T PF14603_consen 29 GGKDLPIKPGEILEVIQFTDDNKVLCRNS-EGKYGYVLRSHLLP 71 (89)
T ss_dssp -TTB----TT-B-EEEEESSSSEEEEEET-TTEEEEEEGGGS--
T ss_pred CcccCCcCCCCEEEEEEeCCCCeEEEeCC-CCceeEEEHHHccC
Confidence 46789999999999999988888888884 89999999988743
No 115
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=23.20 E-value=23 Score=36.86 Aligned_cols=68 Identities=28% Similarity=0.537 Sum_probs=35.9
Q ss_pred cccccCCCCCCCCCCCCcchhHHHhhhcCCCchhHHHHHH------HHHhCCChhHHHHHHHHhhhcCCCCC------ee
Q psy16352 231 IIEFINPRPPYLPLAIPEDLEPRLSRLHGDPIVWWIGQFL------MFLNNPTPNTREIVAKYGEKIKFQKP------IV 298 (905)
Q Consensus 231 i~~~~~~~~~f~p~~~p~~l~~~l~~~h~~P~~Ww~GQ~~------~YL~RP~~~~~~~i~~~~~~l~f~~P------iV 298 (905)
|-.++.+++| +++.=|+.+.+. .+.| .+|+|+-. -||-.|. +=++++....+ |+-| +|
T Consensus 54 I~~SLeG~~P---i~VsFDIDDTvL--FsSp-~F~~Gk~~~sPgs~DyLknq~--FW~~vn~g~D~--~SIPKevA~qLI 123 (237)
T COG3700 54 IENSLEGRPP---IAVSFDIDDTVL--FSSP-GFWRGKKYFSPGSEDYLKNQV--FWEKVNNGWDE--FSIPKEVARQLI 123 (237)
T ss_pred HHhhhcCCCC---eeEeeccCCeeE--eccc-ccccCccccCCChHHhhcCHH--HHHHHhcCCcc--ccchHHHHHHHH
Confidence 3345666665 344445544442 2233 35677532 2333222 23444444444 4434 79
Q ss_pred eeeeeecccc
Q psy16352 299 GIHIRRTDKV 308 (905)
Q Consensus 299 gvHVRrtDK~ 308 (905)
.||+||||++
T Consensus 124 ~MHq~RGD~i 133 (237)
T COG3700 124 DMHQRRGDAI 133 (237)
T ss_pred HHHHhcCCeE
Confidence 9999999998
No 116
>TIGR00649 MG423 conserved hypothetical protein. Contains an ATP-binding domain at the N-terminal end of the protein. Possibly part of a superfamily of beta-lactmases
Probab=21.70 E-value=1.9e+02 Score=33.84 Aligned_cols=114 Identities=16% Similarity=0.172 Sum_probs=59.6
Q ss_pred hhhHHHHHHHHHhcCCeEEEcccCcHhHHHHHHHhccCCCceeecccccccccccCCCceeeeeehhhHhhhh-----cc
Q psy16352 640 SLLGIITDLHYLSNCDHLVCTFSSQICRTAYEQMNAKFPDASDRYRSLDDIYYFGVPTATIWCICRTAYEQMN-----AK 714 (905)
Q Consensus 640 ~l~~~l~Dl~lLs~cD~~VgT~SSnv~RLa~eLrqt~~~d~~~~~~slD~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 714 (905)
.+...+.++.--+.--.+|++|+|++.|+...+.-+.. .++.|.+..|+...-.+ ..
T Consensus 205 ~~~~~i~~~~~~~~~~viv~~fa~~~~R~~~i~~~a~~------------------~~r~v~v~g~~~~~~~~~~~~~g~ 266 (422)
T TIGR00649 205 KVLEQLNDIFKNAKGRVIVATFASNIHRVQQLIQIARK------------------QGRKFAVYGRSMEHLFGIARRLGL 266 (422)
T ss_pred HHHHHHHHHHHhCCCEEEEEEccccHHHHHHHHHHHHH------------------hCCEEEEECccHHHHHHHHHHcCC
Confidence 34445566554455568999999999998777654432 34567766666554111 11
Q ss_pred CCCCCCCeeeccccccc----------CCCcccceeeecCCCCCCCCCccccCCcEEEecccccccee
Q psy16352 715 FPDASDRYRSLDDIYYF----------GGQLSRIHIAVLPHTPRHSSEMALLVGDRISVAGNHWNGYS 772 (905)
Q Consensus 715 ~~~~~~~~~~ld~~~~~----------~~~~~~~~~v~~~~~~~~~~El~l~~GD~I~~~~~~~~G~~ 772 (905)
+.+........+++-.. |+| .+..-++..-....+.-|+|++||.|......|.|+-
T Consensus 267 ~~~~~~~~~~~~~i~~~~~~~~vii~tg~~-g~~~~~l~~~~~~~~~~i~l~~~d~vi~s~~~~~G~~ 333 (422)
T TIGR00649 267 IKNPHNNFISLKEVNNSPDENYLIITTGSQ-GEPYAALTRIANNEHEQIRIRKGDTVVFSAPPIPGNE 333 (422)
T ss_pred ccCCccceeCHHHHhcCCcccEEEEEeCCC-CcHHHHHHHHhCCCCCcEEeCCCCEEEEECCCCCcHH
Confidence 22222233333322111 111 0000011111111245689999998888776777754
No 117
>COG3103 SH3 domain protein [Signal transduction mechanisms]
Probab=21.20 E-value=1.4e+02 Score=31.84 Aligned_cols=93 Identities=14% Similarity=0.203 Sum_probs=56.8
Q ss_pred cccCCcEEEecccccc-ceeeeeecCCCceeeeeCcccccC-C----CCChhhhhhhhheecccCCCCCCCCc--cccCC
Q psy16352 754 ALLVGDRISVAGNHWN-GYSKGRNLRTDQLALYPTFKTSAD-S----FPAFAYIFRRIHIAVLPHTPRHSSEM--DLMVG 825 (905)
Q Consensus 754 ~l~~GD~I~~~~~~~~-G~~~G~n~~tg~~GlfP~~~v~~~-~----~p~~~~~~~~~~~a~y~y~~~~~dEL--~l~~G 825 (905)
+++.|+.+.|.+.+.+ ||+.++. ..|+.|++|+-.+... . .|.-..-.+.. +...+++ .++.|
T Consensus 49 ~i~~Ge~vtvl~~~~~~~~~qI~~-~~g~t~wi~~~~lt~e~s~~~~~p~~~~nVr~~--------t~t~~~v~g~~~~~ 119 (205)
T COG3103 49 SIKAGEKVTVLGTDGNTGYYQIRD-SSGRTGWILSKNLTSEPSSNERVPDLELNVREL--------TKTLSNVDGTWKQG 119 (205)
T ss_pred EecCCcEEEEEEEcCcccEEEEEe-cCCceEEEechhhccccccceecCchhhhhhhc--------ccchhhhhhhhhcC
Confidence 6899999999877666 9999874 5799999997554422 1 33211111110 1011111 36788
Q ss_pred CEEEEeeeeecceecceecCCCceeeccCCCc
Q psy16352 826 DRISVAGNHWNGYSKGRNLRTDQLALYPTFKS 857 (905)
Q Consensus 826 D~i~v~~~~~dgw~~G~n~rtg~~GlfP~~~v 857 (905)
+.+.+.....+||+.=.- .|+.|-.-.-|+
T Consensus 120 t~~~~~sk~~~~w~~~~~--~~k~~~vs~q~~ 149 (205)
T COG3103 120 TAVMQISKTQNNWYIITL--KGKNGYVSGQLV 149 (205)
T ss_pred cEEEEEeeccccchhhhh--hcccchhhhhhe
Confidence 899999999999954322 255555444443
No 118
>COG1212 KdsB CMP-2-keto-3-deoxyoctulosonic acid synthetase [Cell envelope biogenesis, outer membrane]
Probab=20.60 E-value=1.1e+02 Score=33.15 Aligned_cols=31 Identities=26% Similarity=0.410 Sum_probs=24.7
Q ss_pred CcceEEEEcCCHHHHHHHHhhCCCcEEEcCCc
Q psy16352 594 DVKRVYVATDDASVLTEIREKYPQYSVLGDPS 625 (905)
Q Consensus 594 ~~~~IfLATDDp~Vi~e~k~~yp~y~~i~~~~ 625 (905)
...+|+|||||++|.+..++ |+...+.++..
T Consensus 42 ~~~rvvVATDde~I~~av~~-~G~~avmT~~~ 72 (247)
T COG1212 42 GADRVVVATDDERIAEAVQA-FGGEAVMTSKD 72 (247)
T ss_pred CCCeEEEEcCCHHHHHHHHH-hCCEEEecCCC
Confidence 56899999999999998885 76666666553
Done!