BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16353
(132 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B4PRJ9|SPNE_DROYA Probable ATP-dependent RNA helicase spindle-E OS=Drosophila yakuba
GN=spn-E PE=3 SV=1
Length = 1436
Score = 128 bits (322), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/127 (54%), Positives = 88/127 (69%), Gaps = 4/127 (3%)
Query: 6 PGTFSPHATFSPNISLLLCSSLNKPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLS 65
PG + T + NI+L+L + N V+ IV S + E Q VF PPG RKI+L+
Sbjct: 371 PGIYEID-TMAENITLMLENDRN---VKVFIVRCFSLMTPENQRDVFHPPPPGFRKIILT 426
Query: 66 TNIAESSITVPDVKYVVDFCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGR 125
TNIAESSITVPDV YV+DFCLTKVL +N+SSL+L WAS+++C+QRAGRVGR+ GR
Sbjct: 427 TNIAESSITVPDVSYVIDFCLTKVLVTDTATNFSSLRLTWASKANCRQRAGRVGRLRSGR 486
Query: 126 VYYMVTR 132
VY MV +
Sbjct: 487 VYRMVNK 493
>sp|B4GEU5|SPNE_DROPE Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
persimilis GN=spn-E PE=3 SV=1
Length = 1434
Score = 128 bits (321), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 63/125 (50%), Positives = 86/125 (68%), Gaps = 1/125 (0%)
Query: 9 FSPHATFSPNISLLLCSSLN-KPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTN 67
F P N+S +L N P +++ +V HS + E Q +F PPG RKI+++TN
Sbjct: 372 FLPGVGEINNMSDMLKDMANHDPIMKFNMVRCHSLMTSEDQREIFQPSPPGYRKIIMATN 431
Query: 68 IAESSITVPDVKYVVDFCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVY 127
+AESSITVPDV Y++DFCL KVL +N+SSL+L WAS+++C+QRAGRVGR+ GRVY
Sbjct: 432 VAESSITVPDVSYIIDFCLEKVLVTDTSTNFSSLRLAWASKTNCRQRAGRVGRLRNGRVY 491
Query: 128 YMVTR 132
MVT+
Sbjct: 492 RMVTK 496
>sp|Q7QCW2|SPNE_ANOGA Probable ATP-dependent RNA helicase spindle-E OS=Anopheles gambiae
GN=spn-E PE=3 SV=5
Length = 1463
Score = 126 bits (317), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 59/109 (54%), Positives = 83/109 (76%), Gaps = 1/109 (0%)
Query: 25 SSLNKPE-VQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVD 83
S++N E ++ I+ LHS +P E+Q LVFT+ PG RK++LSTNIAESSIT+PDVK+V+D
Sbjct: 392 SNVNSQEQTKFTILKLHSMLPSEEQALVFTKPSPGYRKVILSTNIAESSITIPDVKFVID 451
Query: 84 FCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
FCL +VL +N+++L+ +WAS ++C QRAGR GRV GRVY +V +
Sbjct: 452 FCLHRVLVADTLNNFTTLRTQWASRNNCIQRAGRCGRVMNGRVYRLVNK 500
>sp|B4K5R2|SPNE_DROMO Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
mojavensis GN=spn-E PE=3 SV=1
Length = 1431
Score = 125 bits (313), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 61/103 (59%), Positives = 77/103 (74%)
Query: 30 PEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKV 89
P + IV HS + + Q+ VF P G RK++L+TNI+ESSITVPDV YV+DFCLTKV
Sbjct: 393 PNFKISIVRCHSLMSPDSQEEVFLPPPLGHRKVILTTNISESSITVPDVSYVIDFCLTKV 452
Query: 90 LTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
L SN+SSL+LEWAS+ +C+QRAGRVGR+ GRVY MVT+
Sbjct: 453 LHTDTASNFSSLRLEWASKVNCRQRAGRVGRLRSGRVYRMVTK 495
>sp|Q9VF26|SPNE_DROME Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
melanogaster GN=spn-E PE=2 SV=1
Length = 1434
Score = 124 bits (312), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 77/111 (69%)
Query: 22 LLCSSLNKPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYV 81
L C N P ++ IV S + E Q VF PPG RKI+L+TNIAESSITVPDV YV
Sbjct: 385 LTCMLENDPNIKVSIVRCFSLMTPENQRDVFNPPPPGFRKIILTTNIAESSITVPDVSYV 444
Query: 82 VDFCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
+DFCL KV S++SSL+L WAS+++C+QRAGRVGR+ GRVY MV +
Sbjct: 445 IDFCLAKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNK 495
>sp|B3P3W1|SPNE_DROER Probable ATP-dependent RNA helicase spindle-E OS=Drosophila erecta
GN=spn-E PE=3 SV=1
Length = 1432
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/119 (54%), Positives = 84/119 (70%), Gaps = 3/119 (2%)
Query: 14 TFSPNISLLLCSSLNKPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSI 73
T + NI+ +L S N ++ IV S + E Q VF PPG RKI+L+TNIAESSI
Sbjct: 378 TMAENITSMLQSDRN---IKVFIVRCFSLMTPENQRDVFHPPPPGFRKIILTTNIAESSI 434
Query: 74 TVPDVKYVVDFCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
TVPDV YV+DFCLTKVL +++SSL+L WAS+++C+QRAGRVGR+ GRVY MV +
Sbjct: 435 TVPDVSYVIDFCLTKVLVTDTATSFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVNK 493
>sp|Q3MHU3|TDRD9_RAT Putative ATP-dependent RNA helicase TDRD9 OS=Rattus norvegicus
GN=Tdrd9 PE=2 SV=3
Length = 1384
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/111 (54%), Positives = 81/111 (72%), Gaps = 3/111 (2%)
Query: 22 LLCSSLNKPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYV 81
LL + ++K + ++ LHSS+ E+Q+ VF PG RKI+LSTNIAESS+TVPDVKYV
Sbjct: 406 LLTNMIHK---RLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYV 462
Query: 82 VDFCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
+DFCLT+ L E +NY SL+L WAS++SC QR GR GRVS+G Y ++ R
Sbjct: 463 IDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCYRLIHR 513
>sp|Q14BI7|TDRD9_MOUSE Putative ATP-dependent RNA helicase TDRD9 OS=Mus musculus GN=Tdrd9
PE=1 SV=3
Length = 1383
Score = 124 bits (310), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/111 (54%), Positives = 81/111 (72%), Gaps = 3/111 (2%)
Query: 22 LLCSSLNKPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYV 81
LL + ++K + ++ LHSS+ E+Q+ VF PG RKI+LSTNIAESS+TVPDVKYV
Sbjct: 405 LLTNMIHK---RLQVYPLHSSVTLEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYV 461
Query: 82 VDFCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
+DFCLT+ L E +NY SL+L WAS++SC QR GR GRVS+G Y ++ R
Sbjct: 462 IDFCLTRTLVCDEDTNYQSLRLSWASKTSCDQRKGRAGRVSKGYCYRLIPR 512
>sp|Q296Q5|SPNE_DROPS Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
pseudoobscura pseudoobscura GN=spn-E PE=3 SV=2
Length = 1433
Score = 123 bits (309), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/125 (48%), Positives = 85/125 (68%), Gaps = 1/125 (0%)
Query: 9 FSPHATFSPNISLLLCSSLNKPEV-QWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTN 67
F P N+S +L N + ++ +V HS + + Q +F PPG RKI+++TN
Sbjct: 371 FLPGVGEINNMSDMLKDMANHDSIMKFNMVRCHSLMSSDDQREIFQPSPPGYRKIIMATN 430
Query: 68 IAESSITVPDVKYVVDFCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVY 127
+AESSITVPDV Y++DFCL KVL +N+SSL+L WAS+++C+QRAGRVGR+ GRVY
Sbjct: 431 VAESSITVPDVSYIIDFCLEKVLFTDTFTNFSSLRLVWASKTNCRQRAGRVGRLRNGRVY 490
Query: 128 YMVTR 132
MVT+
Sbjct: 491 RMVTK 495
>sp|Q8NDG6|TDRD9_HUMAN Putative ATP-dependent RNA helicase TDRD9 OS=Homo sapiens GN=TDRD9
PE=2 SV=3
Length = 1382
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 62/111 (55%), Positives = 80/111 (72%), Gaps = 3/111 (2%)
Query: 22 LLCSSLNKPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYV 81
LL S ++K + ++ LHSS+ E+Q+ VF PG RKI+LSTNIAESS+TVPDVKYV
Sbjct: 404 LLTSLVHK---RLQVYPLHSSVALEEQNNVFLSPVPGYRKIILSTNIAESSVTVPDVKYV 460
Query: 82 VDFCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
+DFCLT+ L E +NY SL+L WAS++SC QR GR GRVS G Y +V +
Sbjct: 461 IDFCLTRTLVCDEDTNYQSLRLSWASKTSCNQRKGRAGRVSRGYCYRLVHK 511
>sp|B4HLH4|SPNE_DROSE Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
sechellia GN=spn-E PE=3 SV=1
Length = 1434
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 66/127 (51%), Positives = 86/127 (67%), Gaps = 4/127 (3%)
Query: 6 PGTFSPHATFSPNISLLLCSSLNKPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLS 65
PG + T + NI+ +L + N ++ IV S + E Q VF PPG RKI+L+
Sbjct: 373 PGIYEID-TMAENITCMLENDRN---IKVLIVRCFSLMTPENQRDVFNPPPPGFRKIILA 428
Query: 66 TNIAESSITVPDVKYVVDFCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGR 125
TNIAESSITVPDV YV+DFCLTKV S++SSL+L WAS+++C+QRAGRVGR+ GR
Sbjct: 429 TNIAESSITVPDVSYVIDFCLTKVKVTDTASSFSSLRLTWASKANCRQRAGRVGRLRSGR 488
Query: 126 VYYMVTR 132
VY MV +
Sbjct: 489 VYRMVNK 495
>sp|B4LX81|SPNE_DROVI Probable ATP-dependent RNA helicase spindle-E OS=Drosophila virilis
GN=spn-E PE=3 SV=1
Length = 1433
Score = 122 bits (307), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/97 (61%), Positives = 74/97 (76%)
Query: 36 IVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTVAEG 95
IV HS + + Q+ VF PG RKI+L+TNIAESSITVPDV YV+DFCLTKVL
Sbjct: 399 IVRCHSLMSPDSQEEVFQPPLPGHRKIILTTNIAESSITVPDVSYVIDFCLTKVLHTDTA 458
Query: 96 SNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
+NYS L+LEWAS+ +C+QRAGRVGR+ GRVY MV++
Sbjct: 459 TNYSCLRLEWASKVNCRQRAGRVGRLRSGRVYRMVSK 495
>sp|B0XDC4|SPNE_CULQU Probable ATP-dependent RNA helicase spindle-E OS=Culex
quinquefasciatus GN=spn-E PE=3 SV=1
Length = 1396
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 74/97 (76%)
Query: 36 IVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTVAEG 95
I+ LHS++P + Q VF + P RK++LSTNIAESSITVPD+K+V+DFCL ++L
Sbjct: 341 IMKLHSTLPADDQTAVFRKPGPNQRKVILSTNIAESSITVPDIKFVIDFCLQRILVTDTL 400
Query: 96 SNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
+N+S+L+ EWAS+S+C QRAGR GR+ GRVY +V R
Sbjct: 401 TNFSTLRTEWASKSNCIQRAGRAGRLMSGRVYRLVDR 437
>sp|B4NBB0|SPNE_DROWI Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
willistoni GN=spn-E PE=3 SV=1
Length = 1432
Score = 120 bits (302), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 75/103 (72%)
Query: 30 PEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKV 89
P ++ I+ HS + + Q VF P G RKI+L+TNIAESSITVPDV YV+DFCL KV
Sbjct: 392 PALKVSIIRCHSLMTPDSQRDVFASPPVGYRKIILTTNIAESSITVPDVSYVIDFCLAKV 451
Query: 90 LTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
L +N+SSL+L WAS+S+C+QRAGRVGR+ GRVY MV +
Sbjct: 452 LVTDTATNFSSLRLVWASKSNCRQRAGRVGRLRSGRVYRMVPK 494
>sp|Q16JS8|SPNE_AEDAE Probable ATP-dependent RNA helicase spindle-E OS=Aedes aegypti
GN=spn-E PE=3 SV=1
Length = 1374
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 73/94 (77%)
Query: 39 LHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTVAEGSNY 98
LHS +P ++Q VF + PG RK++LSTNIAESSITVPDVK+++DFCL +VL +N+
Sbjct: 323 LHSILPADEQVKVFRKPAPGQRKVILSTNIAESSITVPDVKFIIDFCLQRVLFTDTTTNF 382
Query: 99 SSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
S+L+ EWAS+++C QR GR GRV +GRVY +V R
Sbjct: 383 STLRTEWASQANCIQRQGRAGRVMDGRVYRLVDR 416
>sp|B3M383|SPNE_DROAN Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
ananassae GN=spn-E PE=3 SV=1
Length = 1429
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 77/104 (74%)
Query: 29 KPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTK 88
+P ++ IV S + + Q VF+ P G RKI+L+TNIAESSITVPDV YV+DFCLTK
Sbjct: 387 EPSMKLFIVRCFSLMTPDAQRDVFSPPPSGFRKIILATNIAESSITVPDVSYVIDFCLTK 446
Query: 89 VLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
VL +N+SSL+L WAS+++C+QRAGRVGR+ GRVY MV +
Sbjct: 447 VLVTDTATNFSSLRLTWASKANCRQRAGRVGRLRSGRVYRMVHK 490
>sp|B8A4F4|TDRD9_DANRE Putative ATP-dependent RNA helicase TDRD9 OS=Danio rerio GN=tdrd9
PE=2 SV=1
Length = 1342
Score = 116 bits (291), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 55/94 (58%), Positives = 71/94 (75%)
Query: 39 LHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTVAEGSNY 98
LHS++ E+Q+ VF PG RKI+LSTNIAESS+TVPDVKYV+DFCL + L + +NY
Sbjct: 377 LHSTVTLEEQNGVFLVPVPGYRKIILSTNIAESSVTVPDVKYVIDFCLVRQLACDKETNY 436
Query: 99 SSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
L++ WAS++SC QR GR GRVS+G Y +VTR
Sbjct: 437 RCLRITWASKTSCNQRRGRAGRVSKGFCYRLVTR 470
>sp|B4JT42|SPNE_DROGR Probable ATP-dependent RNA helicase spindle-E OS=Drosophila
grimshawi GN=spn-E PE=3 SV=1
Length = 1434
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/105 (56%), Positives = 75/105 (71%), Gaps = 4/105 (3%)
Query: 30 PEVQWKIVVLHSSIPKEQQDLVFTRFPP--GVRKIVLSTNIAESSITVPDVKYVVDFCLT 87
P ++ IV HS + + Q+ VF PP G RK++L+TNIAESSITV DV YV+DFCL
Sbjct: 393 PNIKITIVRCHSLMSSDSQEDVFQ--PPLSGHRKVILTTNIAESSITVTDVSYVIDFCLA 450
Query: 88 KVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
KV+ + SN+S L LEWAS+ +C+QRAGRVGR GRVY MVT+
Sbjct: 451 KVMHIDTASNFSCLCLEWASKVNCRQRAGRVGRTRSGRVYRMVTK 495
>sp|Q28141|DHX9_BOVIN ATP-dependent RNA helicase A OS=Bos taurus GN=DHX9 PE=2 SV=1
Length = 1287
Score = 95.5 bits (236), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 67/100 (67%)
Query: 33 QWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTV 92
+++I+ LHS IP+E+Q VF P GV KI+LSTNIAE+SIT+ DV YV+D C KV
Sbjct: 677 RYQILPLHSQIPREEQRKVFDPVPSGVTKIILSTNIAETSITINDVVYVIDSCKQKVKLF 736
Query: 93 AEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
+N ++ WAS+++ +QR GR GRV G +++ +R
Sbjct: 737 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSR 776
>sp|O70133|DHX9_MOUSE ATP-dependent RNA helicase A OS=Mus musculus GN=Dhx9 PE=1 SV=2
Length = 1380
Score = 95.1 bits (235), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 67/100 (67%)
Query: 33 QWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTV 92
+++I+ LHS IP+E+Q VF P GV K++LSTNIAE+SIT+ DV YV+D C KV
Sbjct: 682 RYQILPLHSQIPREEQRKVFDPVPDGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLF 741
Query: 93 AEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
+N ++ WAS+++ +QR GR GRV G +++ +R
Sbjct: 742 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSR 781
>sp|Q5R874|DHX9_PONAB ATP-dependent RNA helicase A OS=Pongo abelii GN=DHX9 PE=2 SV=1
Length = 1269
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 67/100 (67%)
Query: 33 QWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTV 92
+++I+ LHS IP+E+Q VF P GV K++LSTNIAE+SIT+ DV YV+D C KV
Sbjct: 680 RYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLF 739
Query: 93 AEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
+N ++ WAS+++ +QR GR GRV G +++ +R
Sbjct: 740 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSR 779
>sp|Q08211|DHX9_HUMAN ATP-dependent RNA helicase A OS=Homo sapiens GN=DHX9 PE=1 SV=4
Length = 1270
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 67/100 (67%)
Query: 33 QWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTV 92
+++I+ LHS IP+E+Q VF P GV K++LSTNIAE+SIT+ DV YV+D C KV
Sbjct: 680 RYQILPLHSQIPREEQRKVFDPVPVGVTKVILSTNIAETSITINDVVYVIDSCKQKVKLF 739
Query: 93 AEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
+N ++ WAS+++ +QR GR GRV G +++ +R
Sbjct: 740 TAHNNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSR 779
>sp|Q7Z478|DHX29_HUMAN ATP-dependent RNA helicase DHX29 OS=Homo sapiens GN=DHX29 PE=1 SV=2
Length = 1369
Score = 92.4 bits (228), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 64/100 (64%)
Query: 33 QWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTV 92
++K++ LHS + + Q FT PPGVRKIVL+TNIAE+ IT+PDV +V+D TK
Sbjct: 897 RYKVIALHSILSTQDQAAAFTLPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKY 956
Query: 93 AEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
E S SSL + S++S QR GR GRV +G + M TR
Sbjct: 957 HESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRMYTR 996
>sp|Q9H2U1|DHX36_HUMAN Probable ATP-dependent RNA helicase DHX36 OS=Homo sapiens GN=DHX36
PE=1 SV=2
Length = 1008
Score = 92.4 bits (228), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 67/108 (62%)
Query: 22 LLCSSLNKPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYV 81
LL S + ++ I+ LHS +P Q VF R PPGVRKIV++TNIAE+SIT+ DV YV
Sbjct: 507 LLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKRTPPGVRKIVIATNIAETSITIDDVVYV 566
Query: 82 VDFCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYM 129
+D K +N S++ EW S+++ +QR GR GRV G Y++
Sbjct: 567 IDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHL 614
>sp|Q8VHK9|DHX36_MOUSE Probable ATP-dependent RNA helicase DHX36 OS=Mus musculus GN=Dhx36
PE=2 SV=2
Length = 1001
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 67/108 (62%)
Query: 22 LLCSSLNKPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYV 81
LL S + ++ I+ LHS +P Q VF + PPGVRKIV++TNIAE+SIT+ DV YV
Sbjct: 500 LLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGVRKIVIATNIAETSITIDDVVYV 559
Query: 82 VDFCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYM 129
+D K +N S++ EW S+++ +QR GR GRV G Y++
Sbjct: 560 IDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAGRVQPGHCYHL 607
>sp|P24785|MLE_DROME Dosage compensation regulator OS=Drosophila melanogaster GN=mle
PE=2 SV=2
Length = 1293
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 65/100 (65%)
Query: 33 QWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTV 92
Q++I+ HS IP+++Q VF P GV KI+LSTNIAE+SIT+ D+ +V+D C ++
Sbjct: 684 QYQILPCHSQIPRDEQRKVFEPVPEGVTKIILSTNIAETSITIDDIVFVIDICKARMKLF 743
Query: 93 AEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
+N +S WAS+++ +QR GR GRV G + + +R
Sbjct: 744 TSHNNLTSYATVWASKTNLEQRKGRAGRVRPGFCFTLCSR 783
>sp|Q68FK8|DHX9_XENLA ATP-dependent RNA helicase A-like protein OS=Xenopus laevis GN=dhx9
PE=2 SV=1
Length = 1262
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%)
Query: 36 IVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTVAEG 95
I+ LHS IP+++Q VF P G+ K++LSTNIAE+SIT+ DV YV+D C KV
Sbjct: 685 ILPLHSQIPRDEQRKVFDPVPDGIIKVILSTNIAETSITINDVVYVIDSCKQKVKLFTSH 744
Query: 96 SNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
+N ++ WAS+++ +QR GR GRV G +++ ++
Sbjct: 745 NNMTNYATVWASKTNLEQRKGRAGRVRPGFCFHLCSK 781
>sp|Q6PGC1|DHX29_MOUSE ATP-dependent RNA helicase Dhx29 OS=Mus musculus GN=Dhx29 PE=2 SV=1
Length = 1365
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/100 (45%), Positives = 63/100 (63%)
Query: 33 QWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTV 92
+++++ LHS + + Q F PPGVRKIVL+TNIAE+ IT+PDV +V+D TK
Sbjct: 896 RYQVIALHSVLSTQDQAAAFMFPPPGVRKIVLATNIAETGITIPDVVFVIDTGRTKENKY 955
Query: 93 AEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
E S SSL + S++S QR GR GRV +G + + TR
Sbjct: 956 HESSQMSSLVETFVSKASALQRQGRAGRVRDGFCFRLYTR 995
>sp|A3KMI0|DHX29_XENLA ATP-dependent RNA helicase DHX29 OS=Xenopus laevis GN=dhx29 PE=2
SV=1
Length = 1362
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/100 (44%), Positives = 60/100 (60%)
Query: 33 QWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTV 92
++K++ LHS + + Q F P G RKIVL+TNIAE+ IT+PDV +V+D TK
Sbjct: 892 RYKLIALHSILSSQDQAEAFILPPAGTRKIVLATNIAETGITIPDVVFVIDAGRTKENRY 951
Query: 93 AEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
E S SSL + S++S QR GR GRV G + + TR
Sbjct: 952 HESSQMSSLVETFISKASALQRQGRAGRVRNGYCFRLYTR 991
>sp|Q5ZI74|DHX30_CHICK Putative ATP-dependent RNA helicase DHX30 OS=Gallus gallus GN=DHX30
PE=2 SV=1
Length = 1231
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 63/110 (57%)
Query: 23 LCSSLNKPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVV 82
L L ++ ++ +HS+IP Q +F R PPGVRKIVL+TNIAE+SIT+ D+ +VV
Sbjct: 731 LLEMLGSQNSRYLVLPVHSNIPMMDQQNIFQRPPPGVRKIVLATNIAETSITINDIVHVV 790
Query: 83 DFCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
D K + S L+ W S+S+ QR GR GR G Y++ R
Sbjct: 791 DSGTHKEERYDLKTKVSCLETVWVSKSNVVQRRGRAGRCQSGFAYHLFPR 840
>sp|Q14147|DHX34_HUMAN Probable ATP-dependent RNA helicase DHX34 OS=Homo sapiens GN=DHX34
PE=1 SV=2
Length = 1143
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 33 QWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTV 92
+W ++ LHS++ QD VF PPGVRK +LSTNIAE+S+T+ +++VVD K ++
Sbjct: 407 RWVVLPLHSALSVADQDKVFDVAPPGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSY 466
Query: 93 AEGSNYSSLQLEWASESSCQQRAGRVGRVSEG---RVY 127
+ LQ W S++S +QR GR GR G R+Y
Sbjct: 467 DPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCFRLY 504
>sp|Q5BJS0|DHX30_RAT Putative ATP-dependent RNA helicase DHX30 OS=Rattus norvegicus
GN=Dhx30 PE=1 SV=1
Length = 1194
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 64/110 (58%)
Query: 23 LCSSLNKPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVV 82
L +L E ++ I+ +HS+IP Q +F + P GVRKIVL+TNIAE+SITV D+ +VV
Sbjct: 688 LQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVV 747
Query: 83 DFCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
D L K + S L+ W S ++ QR GR GR G Y++ R
Sbjct: 748 DSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPR 797
>sp|Q99PU8|DHX30_MOUSE Putative ATP-dependent RNA helicase DHX30 OS=Mus musculus GN=Dhx30
PE=2 SV=1
Length = 1217
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 64/110 (58%)
Query: 23 LCSSLNKPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVV 82
L +L E ++ I+ +HS+IP Q +F + P GVRKIVL+TNIAE+SITV D+ +VV
Sbjct: 711 LQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPLGVRKIVLATNIAETSITVNDIVHVV 770
Query: 83 DFCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
D L K + S L+ W S ++ QR GR GR G Y++ R
Sbjct: 771 DSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPR 820
>sp|Q7L2E3|DHX30_HUMAN Putative ATP-dependent RNA helicase DHX30 OS=Homo sapiens GN=DHX30
PE=1 SV=1
Length = 1194
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%)
Query: 23 LCSSLNKPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVV 82
L +L E ++ I+ +HS+IP Q +F + P GVRKIVL+TNIAE+SIT+ D+ +VV
Sbjct: 688 LQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSITINDIVHVV 747
Query: 83 DFCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
D L K + S L+ W S ++ QR GR GR G Y++ R
Sbjct: 748 DSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPR 797
>sp|Q2NKY8|DHX30_BOVIN Putative ATP-dependent RNA helicase DHX30 OS=Bos taurus GN=DHX30
PE=2 SV=1
Length = 1220
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%)
Query: 23 LCSSLNKPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVV 82
L +L E ++ I+ +HS+IP Q +F + P GVRKIVL+TNIAE+SIT+ D+ +VV
Sbjct: 714 LQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPIGVRKIVLATNIAETSITINDIVHVV 773
Query: 83 DFCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
D L K + S L+ W S ++ QR GR GR G Y++ R
Sbjct: 774 DSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPR 823
>sp|O60114|YG65_SCHPO Uncharacterized helicase C15C4.05 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPBC15C4.05 PE=3 SV=1
Length = 1428
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 61/97 (62%)
Query: 36 IVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTVAEG 95
I +LHS++ QQ VF P G RKIVLSTNIAE+ +T+PDV V+D + + +
Sbjct: 937 IYMLHSTLSSAQQQSVFNIPPKGCRKIVLSTNIAETGVTIPDVTCVIDTGVHREMRYNSR 996
Query: 96 SNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
+ S L + S+++ +QR+GR GRV EG Y++ ++
Sbjct: 997 RHLSRLTDTFVSKANAKQRSGRAGRVQEGICYHLFSK 1033
>sp|Q6P5D3|DHX57_MOUSE Putative ATP-dependent RNA helicase DHX57 OS=Mus musculus GN=Dhx57
PE=2 SV=2
Length = 1388
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 58/93 (62%)
Query: 39 LHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTVAEGSNY 98
LHSS+ E+Q VF + P GV KI++STNIAE+SIT+ DV YV+D K G
Sbjct: 888 LHSSLSSEEQQAVFVKPPMGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDAGKGM 947
Query: 99 SSLQLEWASESSCQQRAGRVGRVSEGRVYYMVT 131
SL+ + S+++ QR GR GRV+ G +++ T
Sbjct: 948 ESLEDTFVSQANALQRKGRAGRVASGVCFHLFT 980
>sp|Q9DBV3|DHX34_MOUSE Probable ATP-dependent RNA helicase DHX34 OS=Mus musculus GN=Dhx34
PE=2 SV=2
Length = 1145
Score = 79.7 bits (195), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 58/97 (59%)
Query: 33 QWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTV 92
+W ++ LHS++ QD VF P GVRK +LSTNIAE+S+T+ +++VVD K ++
Sbjct: 409 RWVVLPLHSALSVSDQDKVFDVAPAGVRKCILSTNIAETSVTIDGIRFVVDSGKVKEMSY 468
Query: 93 AEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYM 129
+ LQ W S++S +QR GR GR G Y +
Sbjct: 469 DPQAKLQRLQEFWISQASAEQRKGRAGRTGPGVCYRL 505
>sp|Q5R607|DHX30_PONAB Putative ATP-dependent RNA helicase DHX30 OS=Pongo abelii GN=DHX30
PE=2 SV=1
Length = 1194
Score = 79.0 bits (193), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 63/110 (57%)
Query: 23 LCSSLNKPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVV 82
L +L E ++ I+ +HS+IP Q +F + P GVRKIVL+TNIAE+S T+ D+ +VV
Sbjct: 688 LQEALGMHESKYLILPVHSNIPMMDQKAIFQQPPVGVRKIVLATNIAETSTTINDIVHVV 747
Query: 83 DFCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
D L K + S L+ W S ++ QR GR GR G Y++ R
Sbjct: 748 DSGLHKEERYDLKTKVSCLETVWVSRANVIQRRGRAGRCQSGFAYHLFPR 797
>sp|Q6P158|DHX57_HUMAN Putative ATP-dependent RNA helicase DHX57 OS=Homo sapiens GN=DHX57
PE=1 SV=2
Length = 1386
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%)
Query: 39 LHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTVAEGSNY 98
LHSS+ E+Q VF + P GV KI++STNIAE+SIT+ DV YV+D K
Sbjct: 886 LHSSLSSEEQQAVFVKPPAGVTKIIISTNIAETSITIDDVVYVIDSGKMKEKRYDASKGM 945
Query: 99 SSLQLEWASESSCQQRAGRVGRVSEGRVYYMVT 131
SL+ + S+++ QR GR GRV+ G +++ T
Sbjct: 946 ESLEDTFVSQANALQRKGRAGRVASGVCFHLFT 978
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 39 LHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTVAEGSNY 98
LH + E+Q +VF +P G RK++ +TNIAE+S+T+P VKYV+D + K +
Sbjct: 551 LHGKLSFEEQFMVFQNYP-GRRKVIFATNIAETSLTIPGVKYVIDSGMVKESKYEPRTGM 609
Query: 99 SSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
S L++ S+SS +QRAGR GR GR Y + ++
Sbjct: 610 SILKVCQVSQSSARQRAGRAGRTEPGRCYRLYSK 643
>sp|Q04217|DHR1_YEAST Probable ATP-dependent RNA helicase DHR1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=ECM16 PE=1
SV=1
Length = 1267
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 59/96 (61%)
Query: 36 IVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTVAEG 95
++ L+S +P ++Q VF + P G R +++TN+AE+S+T+P V+YVVD +K E
Sbjct: 731 VLPLYSLLPTKEQMRVFQKPPQGSRLCIVATNVAETSLTIPGVRYVVDSGRSKERKYNES 790
Query: 96 SNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVT 131
+ S ++ W S++S QR+GR GR G Y + +
Sbjct: 791 NGVQSFEVGWVSKASANQRSGRAGRTGPGHCYRLYS 826
>sp|O22243|C3H31_ARATH Zinc finger CCCH domain-containing protein 31 OS=Arabidopsis
thaliana GN=At2g47680 PE=2 SV=2
Length = 1015
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
Query: 34 WKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTVA 93
+++ +LH SI EQ L + RK++L+TNIAESS+T+P V YV+D C + +
Sbjct: 297 FEVHILHRSIDTEQA-LAAMKICRSRRKVILATNIAESSVTIPKVAYVIDSCRSLQVFWD 355
Query: 94 EGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMV 130
++QL W S S +QR GR GR +G VY +V
Sbjct: 356 PSRKRDAVQLVWVSRSQAEQRRGRTGRTCDGEVYRLV 392
>sp|Q1EHT7|C3H4_ORYSJ Zinc finger CCCH domain-containing protein 4 OS=Oryza sativa subsp.
japonica GN=Os01g0256800 PE=2 SV=1
Length = 1007
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 7/113 (6%)
Query: 19 ISLLLCSSLNKPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDV 78
I LL SS+ +K+ +LH SI ++ L + RK++L+TNIAESS+T+P V
Sbjct: 284 IRLLSASSM------FKVHILHRSIDTDEA-LQTMKVSKSCRKVILATNIAESSVTIPGV 336
Query: 79 KYVVDFCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVT 131
YV+D C + + S +L W S+S +QR GR GR +G++Y +VT
Sbjct: 337 AYVIDSCRSLQVYWDPIRKTDSAELVWVSKSQAEQRKGRTGRTCDGQIYRLVT 389
>sp|Q38953|DHX8_ARATH Probable pre-mRNA-splicing factor ATP-dependent RNA helicase
OS=Arabidopsis thaliana GN=At3g26560 PE=1 SV=2
Length = 1168
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 57/96 (59%)
Query: 36 IVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTVAEG 95
I+ ++S++P E Q +F PPG RK+V++TNIAE+S+T+ + YVVD K
Sbjct: 759 ILPVYSALPSEMQSRIFDPPPPGKRKVVVATNIAEASLTIDGIYYVVDPGFAKQNVYNPK 818
Query: 96 SNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVT 131
SL + S++S +QRAGR GR G+ Y + T
Sbjct: 819 QGLESLVITPISQASAKQRAGRAGRTGPGKCYRLYT 854
>sp|Q10752|CDC28_SCHPO Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein
cdc28 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=cdc28 PE=3 SV=2
Length = 1055
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 61/110 (55%)
Query: 23 LCSSLNKPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVV 82
LC L K + + +++++P E Q +F PPG RK+VL+TNIAE+SIT+ V +V+
Sbjct: 650 LCRILGKRIPEIILCPIYANLPSELQAKIFDPTPPGARKVVLATNIAETSITIDGVNFVI 709
Query: 83 DFCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
D K + SL S +S QRAGR GRV G+ + + TR
Sbjct: 710 DSGFVKQNMYNPRTGMESLVSVPCSRASADQRAGRAGRVGPGKCFRLYTR 759
>sp|Q9H6S0|YTDC2_HUMAN Probable ATP-dependent RNA helicase YTHDC2 OS=Homo sapiens
GN=YTHDC2 PE=1 SV=2
Length = 1430
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 60/100 (60%)
Query: 33 QWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTV 92
++++ +LHS++ Q V P GVRKI+LSTNIAE+SITV DV +V+D K +
Sbjct: 655 RYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSF 714
Query: 93 AEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
+ + L++ W S++S QR GR GR G + + +R
Sbjct: 715 DALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSR 754
>sp|Q767K6|DHX16_PIG Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
OS=Sus scrofa GN=DHX16 PE=3 SV=1
Length = 1045
Score = 73.2 bits (178), Expect = 4e-13, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
Query: 24 CSSLNKPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVD 83
C L + ++ +++++P + Q +F PPG RK+V++TNIAE+S+T+ + YV+D
Sbjct: 636 CRRLGSKIRELLVLPIYANLPSDMQARIFQPTPPGARKVVVATNIAETSLTIEGIIYVLD 695
Query: 84 --FCLTKVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVT 131
FC K G SL + S++S QRAGR GRV+ G+ + + T
Sbjct: 696 PGFCKQKSYNPRTG--MESLTVTPCSKASANQRAGRAGRVAAGKCFRLYT 743
>sp|B2RR83|YTDC2_MOUSE Probable ATP-dependent RNA helicase YTHDC2 OS=Mus musculus
GN=Ythdc2 PE=2 SV=1
Length = 1445
Score = 73.2 bits (178), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 60/100 (60%)
Query: 33 QWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLTKVLTV 92
++++ +LHS++ Q V P GVRKI+LSTNIAE+SITV DV +V+D K +
Sbjct: 670 RYQVFMLHSNMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSF 729
Query: 93 AEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVTR 132
+ + L++ W S++S QR GR GR G + + +R
Sbjct: 730 DALNFVTMLKMVWISKASAIQRKGRAGRCRPGICFRLFSR 769
>sp|Q03319|PRH1_SCHPO Probable ATP-dependent RNA helicase prh1 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=prh1 PE=3 SV=2
Length = 719
Score = 73.2 bits (178), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 2/104 (1%)
Query: 28 NKPEVQWKIVVLHSSIPKEQQDLVFTRFPPGVRKIVLSTNIAESSITVPDVKYVVDFCLT 87
N P++Q L +S+P+EQQ VF RK+VLSTNIAE+S+T+ ++YV+D L
Sbjct: 334 NLPQIQ--ACPLFASLPQEQQLQVFLPALANHRKVVLSTNIAETSVTISGIRYVIDTGLA 391
Query: 88 KVLTVAEGSNYSSLQLEWASESSCQQRAGRVGRVSEGRVYYMVT 131
K+ SL ++ S+S+ QR+GR GR + G+ Y + T
Sbjct: 392 KIKQFNSKLGLESLTVQPISQSAAMQRSGRAGREAAGQCYRIYT 435
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,548,273
Number of Sequences: 539616
Number of extensions: 1618576
Number of successful extensions: 4656
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 297
Number of HSP's successfully gapped in prelim test: 52
Number of HSP's that attempted gapping in prelim test: 4315
Number of HSP's gapped (non-prelim): 354
length of query: 132
length of database: 191,569,459
effective HSP length: 98
effective length of query: 34
effective length of database: 138,687,091
effective search space: 4715361094
effective search space used: 4715361094
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)