BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16364
(276 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O14617|AP3D1_HUMAN AP-3 complex subunit delta-1 OS=Homo sapiens GN=AP3D1 PE=1 SV=1
Length = 1153
Score = 254 bits (649), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 117/139 (84%), Positives = 132/139 (94%)
Query: 1 MSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDK 60
MSKILKTHPKSVQSH+DLI+QCLDDKDESIRLRALDLLYGMVSKK LMEIVKKLM H+DK
Sbjct: 327 MSKILKTHPKSVQSHKDLILQCLDDKDESIRLRALDLLYGMVSKKNLMEIVKKLMTHVDK 386
Query: 61 AEGTMYRDELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDVAI 120
AEGT YRDELL+K+IDICSQ+NYQYITNFEWY+++LVELTR+EGTRHG L+AAQM+DVAI
Sbjct: 387 AEGTTYRDELLTKIIDICSQSNYQYITNFEWYISILVELTRLEGTRHGHLIAAQMLDVAI 446
Query: 121 RVSAVRAFAVAQMSSLLAS 139
RV A+R FAV+QMS+LL S
Sbjct: 447 RVKAIRKFAVSQMSALLDS 465
Score = 192 bits (488), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/129 (73%), Positives = 102/129 (79%), Gaps = 21/129 (16%)
Query: 169 IKFSSRMPNH---------------------MKYLGLLAMSKILKTHPKSVQSHRDLIMQ 207
I SS MPNH +KYLGLLAMSKILKTHPKSVQSH+DLI+Q
Sbjct: 288 ISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQ 347
Query: 208 CLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRDELLSKVIDICSQN 267
CLDDKDESIRLRALDLLYGMVSKK LMEIVKKLM H+DKAEGT YRDELL+K+IDICSQ+
Sbjct: 348 CLDDKDESIRLRALDLLYGMVSKKNLMEIVKKLMTHVDKAEGTTYRDELLTKIIDICSQS 407
Query: 268 NYQYITNFE 276
NYQYITNFE
Sbjct: 408 NYQYITNFE 416
>sp|O54774|AP3D1_MOUSE AP-3 complex subunit delta-1 OS=Mus musculus GN=Ap3d1 PE=1 SV=1
Length = 1199
Score = 253 bits (647), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 117/139 (84%), Positives = 132/139 (94%)
Query: 1 MSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDK 60
MSKILKTHPKSVQSH+DLI+QCLDDKDESIRLRALDLLYGMVSKK LMEIVKKLM H+DK
Sbjct: 327 MSKILKTHPKSVQSHKDLILQCLDDKDESIRLRALDLLYGMVSKKNLMEIVKKLMTHVDK 386
Query: 61 AEGTMYRDELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDVAI 120
AEGT YRDELL+K+IDICSQ+NYQ+ITNFEWY+++LVELTR+EGTRHG L+AAQM+DVAI
Sbjct: 387 AEGTTYRDELLTKIIDICSQSNYQHITNFEWYISILVELTRLEGTRHGHLIAAQMLDVAI 446
Query: 121 RVSAVRAFAVAQMSSLLAS 139
RV A+R FAV+QMSSLL S
Sbjct: 447 RVKAIRKFAVSQMSSLLDS 465
Score = 190 bits (483), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 94/129 (72%), Positives = 102/129 (79%), Gaps = 21/129 (16%)
Query: 169 IKFSSRMPNH---------------------MKYLGLLAMSKILKTHPKSVQSHRDLIMQ 207
I SS MPNH +KYLGLLAMSKILKTHPKSVQSH+DLI+Q
Sbjct: 288 ISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQSHKDLILQ 347
Query: 208 CLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRDELLSKVIDICSQN 267
CLDDKDESIRLRALDLLYGMVSKK LMEIVKKLM H+DKAEGT YRDELL+K+IDICSQ+
Sbjct: 348 CLDDKDESIRLRALDLLYGMVSKKNLMEIVKKLMTHVDKAEGTTYRDELLTKIIDICSQS 407
Query: 268 NYQYITNFE 276
NYQ+ITNFE
Sbjct: 408 NYQHITNFE 416
>sp|Q865S1|AP3D1_BOVIN AP-3 complex subunit delta-1 OS=Bos taurus GN=AP3D1 PE=1 SV=2
Length = 1207
Score = 251 bits (641), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 114/139 (82%), Positives = 132/139 (94%)
Query: 1 MSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDK 60
MSKIL+THPKSVQ+H+DL++QCLDDKDESIRLRALDLLYGMVSKK LMEIVKKLM H+DK
Sbjct: 327 MSKILRTHPKSVQAHKDLVLQCLDDKDESIRLRALDLLYGMVSKKNLMEIVKKLMTHVDK 386
Query: 61 AEGTMYRDELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDVAI 120
AEGT YRDELL+K+IDICSQ+NYQ+ITNFEWY+++LVELTR+EGTRHG L+AAQM+DVAI
Sbjct: 387 AEGTTYRDELLTKIIDICSQSNYQHITNFEWYISILVELTRLEGTRHGHLIAAQMLDVAI 446
Query: 121 RVSAVRAFAVAQMSSLLAS 139
RV A+R FAVAQMS+LL S
Sbjct: 447 RVKAIRRFAVAQMSALLDS 465
Score = 188 bits (477), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 91/129 (70%), Positives = 102/129 (79%), Gaps = 21/129 (16%)
Query: 169 IKFSSRMPNH---------------------MKYLGLLAMSKILKTHPKSVQSHRDLIMQ 207
I SS MPNH +KYLGLLAMSKIL+THPKSVQ+H+DL++Q
Sbjct: 288 ISLSSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKILRTHPKSVQAHKDLVLQ 347
Query: 208 CLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRDELLSKVIDICSQN 267
CLDDKDESIRLRALDLLYGMVSKK LMEIVKKLM H+DKAEGT YRDELL+K+IDICSQ+
Sbjct: 348 CLDDKDESIRLRALDLLYGMVSKKNLMEIVKKLMTHVDKAEGTTYRDELLTKIIDICSQS 407
Query: 268 NYQYITNFE 276
NYQ+ITNFE
Sbjct: 408 NYQHITNFE 416
>sp|P54362|AP3D_DROME AP-3 complex subunit delta OS=Drosophila melanogaster GN=g PE=1
SV=4
Length = 1034
Score = 223 bits (567), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 152/199 (76%), Gaps = 9/199 (4%)
Query: 1 MSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDK 60
MSKILKTHPKSVQ+H+DLI+ CLDDKDESIRLRALDLLYGMVSKK LMEIVK+L+ HM++
Sbjct: 328 MSKILKTHPKSVQAHKDLILACLDDKDESIRLRALDLLYGMVSKKNLMEIVKRLLGHMER 387
Query: 61 AEGTMYRDELLSKVIDICSQNNYQYITNFEWYMTVLVELTRME-GTRHGALVAAQMMDVA 119
AEG+ YRDELL KVI+IC+Q++Y Y+TNFEWY+TVLVEL ++E G+RHG L+A Q++DVA
Sbjct: 388 AEGSAYRDELLYKVIEICAQSSYLYVTNFEWYLTVLVELIQLEAGSRHGRLIAEQLLDVA 447
Query: 120 IRVSAVRAFAVAQMSSLLASPSPPLSQPSSRMAEMMFDEYSDRSSKIFNIKFSSRMPNHM 179
IRV VR FAV +M++LL + + +S S+ M E+++ ++ +F+ + +
Sbjct: 448 IRVPVVRQFAVNEMTNLLDTFT--VSAQSNSMYEVLY------AAAWIVGEFAGELEDAE 499
Query: 180 KYLGLLAMSKILKTHPKSV 198
K L +L ++L H + V
Sbjct: 500 KTLNILLRPRLLPGHIQGV 518
Score = 174 bits (440), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 85/129 (65%), Positives = 99/129 (76%), Gaps = 21/129 (16%)
Query: 169 IKFSSRMPNH---------------------MKYLGLLAMSKILKTHPKSVQSHRDLIMQ 207
I SS MPNH +KYLGLLAMSKILKTHPKSVQ+H+DLI+
Sbjct: 289 ISISSGMPNHSASIQLCVQKLRILIEDSDQNLKYLGLLAMSKILKTHPKSVQAHKDLILA 348
Query: 208 CLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRDELLSKVIDICSQN 267
CLDDKDESIRLRALDLLYGMVSKK LMEIVK+L+ HM++AEG+ YRDELL KVI+IC+Q+
Sbjct: 349 CLDDKDESIRLRALDLLYGMVSKKNLMEIVKRLLGHMERAEGSAYRDELLYKVIEICAQS 408
Query: 268 NYQYITNFE 276
+Y Y+TNFE
Sbjct: 409 SYLYVTNFE 417
>sp|Q54WN0|AP3D_DICDI AP-3 complex subunit delta OS=Dictyostelium discoideum GN=ap3d1
PE=3 SV=1
Length = 1143
Score = 166 bits (419), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 76/157 (48%), Positives = 117/157 (74%), Gaps = 3/157 (1%)
Query: 1 MSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDK 60
++ I+K HPK+V HRDL++ CL+D D SIRLRALDLL GM SKK + +IV KL+ H+D
Sbjct: 308 LNNIMKIHPKAVSEHRDLVLNCLEDDDISIRLRALDLLPGMTSKKNIGDIVFKLLDHLDN 367
Query: 61 AEGTMYRDELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDVAI 120
AEG Y+++++ K+I++CS YQ+IT+FEWY+ +LV+L++++ + HG L+A+Q++DV I
Sbjct: 368 AEG-QYKEQIIEKIIELCSMGTYQFITDFEWYINILVKLSQIQDSIHGKLIASQLLDVVI 426
Query: 121 RVSAVRAFAVAQMSSLLASPSPPLSQPS-SRMAEMMF 156
RV VRA++ QM LL +P +S P+ M E+++
Sbjct: 427 RVKIVRAYSTRQMIELLKNPK-LMSNPTEGGMCEVLY 462
Score = 126 bits (316), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 79/99 (79%), Gaps = 1/99 (1%)
Query: 178 HMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIV 237
++KYLGLLA++ I+K HPK+V HRDL++ CL+D D SIRLRALDLL GM SKK + +IV
Sbjct: 299 NLKYLGLLALNNIMKIHPKAVSEHRDLVLNCLEDDDISIRLRALDLLPGMTSKKNIGDIV 358
Query: 238 KKLMVHMDKAEGTMYRDELLSKVIDICSQNNYQYITNFE 276
KL+ H+D AEG Y+++++ K+I++CS YQ+IT+FE
Sbjct: 359 FKLLDHLDNAEG-QYKEQIIEKIIELCSMGTYQFITDFE 396
>sp|Q9UTL8|AP3D_SCHPO AP-3 complex subunit delta OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=apl5 PE=3 SV=2
Length = 825
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/145 (37%), Positives = 89/145 (61%), Gaps = 4/145 (2%)
Query: 1 MSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHM-- 58
+ K+ THP V + D+I++CL D D SIRLRALDL+ +V+K+ + IVK LM+ +
Sbjct: 314 LRKLANTHPSLVSAQLDIILKCLVDTDTSIRLRALDLVNEIVNKENIRTIVKTLMLQLIV 373
Query: 59 --DKAEGTMYRDELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMM 116
D++ R+ +++I++ S++ Y I +FEW +TV V+L + G G L+ Q++
Sbjct: 374 SSDESAVEDIRNSTATRIIEMTSKSTYMNIADFEWLLTVYVDLANIPGIDTGTLLNNQII 433
Query: 117 DVAIRVSAVRAFAVAQMSSLLASPS 141
D+ +RV A+R F+V S + PS
Sbjct: 434 DLCVRVKALRPFSVDIFSQAILDPS 458
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 66/103 (64%), Gaps = 4/103 (3%)
Query: 178 HMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIV 237
++KY+ LL + K+ THP V + D+I++CL D D SIRLRALDL+ +V+K+ + IV
Sbjct: 305 NLKYIALLCLRKLANTHPSLVSAQLDIILKCLVDTDTSIRLRALDLVNEIVNKENIRTIV 364
Query: 238 KKLMVHM----DKAEGTMYRDELLSKVIDICSQNNYQYITNFE 276
K LM+ + D++ R+ +++I++ S++ Y I +FE
Sbjct: 365 KTLMLQLIVSSDESAVEDIRNSTATRIIEMTSKSTYMNIADFE 407
>sp|Q9C744|AP3D_ARATH AP-3 complex subunit delta OS=Arabidopsis thaliana GN=DELTA-ADR
PE=1 SV=1
Length = 869
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 85/141 (60%), Gaps = 1/141 (0%)
Query: 1 MSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDK 60
+S + H +V +++++++ + D+D +++L AL LL MV++ + EI + LM + K
Sbjct: 320 LSIVAPKHLWAVLENKEVVVKAMSDEDPNVKLEALHLLMAMVNEDNVSEISRILMNYALK 379
Query: 61 AEGTMYRDELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDVAI 120
++ ++ +E++ V+ CS+N Y+ I +F+WY+++L E+ R+ + G + Q++D+ +
Sbjct: 380 SD-PLFCNEIIFSVLSACSRNAYEIIVDFDWYLSLLGEMARIPHCQRGEDIEHQLIDIGM 438
Query: 121 RVSAVRAFAVAQMSSLLASPS 141
RV R V +LL P+
Sbjct: 439 RVRDARPQLVRVSWALLIDPA 459
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 66/101 (65%), Gaps = 2/101 (1%)
Query: 176 PNHMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLME 235
PN +KYLGL A+S + H +V +++++++ + D+D +++L AL LL MV++ + E
Sbjct: 310 PN-LKYLGLNALSIVAPKHLWAVLENKEVVVKAMSDEDPNVKLEALHLLMAMVNEDNVSE 368
Query: 236 IVKKLMVHMDKAEGTMYRDELLSKVIDICSQNNYQYITNFE 276
I + LM + K++ ++ +E++ V+ CS+N Y+ I +F+
Sbjct: 369 ISRILMNYALKSD-PLFCNEIIFSVLSACSRNAYEIIVDFD 408
>sp|Q8I8U2|AP1G_DICDI AP-1 complex subunit gamma OS=Dictyostelium discoideum GN=ap1g1
PE=1 SV=1
Length = 895
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 177 NHMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEI 236
N+++Y+ L +S+++ T ++VQ HR+ I++CL D D SIR RALDL+Y +V++ + +
Sbjct: 320 NNIRYVALNTLSRVVNTDIQAVQRHRNTIVECLKDPDVSIRCRALDLIYSLVTESNIRVL 379
Query: 237 VKKLMVHMDKAEGTMYRDELLSKV 260
V++L+ + A+ ++ EL++K+
Sbjct: 380 VRELLNFLLIADA-QFKSELVAKL 402
Score = 65.9 bits (159), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 85/161 (52%), Gaps = 7/161 (4%)
Query: 1 MSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDK 60
+S+++ T ++VQ HR+ I++CL D D SIR RALDL+Y +V++ + +V++L+ +
Sbjct: 330 LSRVVNTDIQAVQRHRNTIVECLKDPDVSIRCRALDLIYSLVTESNIRVLVRELLNFLLI 389
Query: 61 AEGTMYRDELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDVAI 120
A+ ++ EL++K+ + +Y N W + ++ + + G V + ++ +
Sbjct: 390 ADA-QFKSELVAKLCIVTE----KYAPNKRWQIDTILRVMSIAGNFIPDEVPSNLIQLIS 444
Query: 121 RVSAVRAFAVAQMSSLLASPSPPLSQPSSRMAEMMFDEYSD 161
+ ++AV ++ LA QP +++ EY D
Sbjct: 445 STPELSSYAVQKL--YLALKQDITQQPLTQVGLWCIGEYGD 483
>sp|Q86KI1|AP2A2_DICDI AP-2 complex subunit alpha-2 OS=Dictyostelium discoideum GN=ap2a1-1
PE=3 SV=1
Length = 989
Score = 63.2 bits (152), Expect = 2e-09, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 72/128 (56%), Gaps = 5/128 (3%)
Query: 12 VQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRDELL 71
++ ++D ++ L D D SIR RALDLLYGM K T IV +L+ ++ A+ + R+EL+
Sbjct: 370 IKKYQDTVLLSLKDSDISIRRRALDLLYGMCDKNTCKHIVAELLSYLQTADYAI-REELV 428
Query: 72 SKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDVAIRVSAVRAFAVA 131
K+ ++ ++ +N+ WY+ V+++L G + +++ + ++A+A +
Sbjct: 429 IKIANLAE----KFASNYSWYVDVILQLITTAGDFVSDDIWFRVVKIVTNHEDIQAYAAS 484
Query: 132 QMSSLLAS 139
+ + L S
Sbjct: 485 TVFNALQS 492
Score = 59.7 bits (143), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/107 (33%), Positives = 63/107 (58%), Gaps = 6/107 (5%)
Query: 170 KFSSRMPNHMKYLGLLAMSKILKTHPKS---VQSHRDLIMQCLDDKDESIRLRALDLLYG 226
+F + +++YLGL AMS ++ ++ ++D ++ L D D SIR RALDLLYG
Sbjct: 339 RFITVKETNIRYLGLEAMSHFASLSNETSIMIKKYQDTVLLSLKDSDISIRRRALDLLYG 398
Query: 227 MVSKKTLMEIVKKLMVHMDKAEGTMYRDELLSKVIDICSQ--NNYQY 271
M K T IV +L+ ++ A+ + R+EL+ K+ ++ + +NY +
Sbjct: 399 MCDKNTCKHIVAELLSYLQTADYAI-REELVIKIANLAEKFASNYSW 444
>sp|Q12028|AP1G1_YEAST AP-1 complex subunit gamma-1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=APL4 PE=1 SV=1
Length = 832
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%)
Query: 170 KFSSRMPNHMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVS 229
KF + N+ KY+ L + K++ P +VQ HR I CL D D SIR+RAL+L + ++
Sbjct: 345 KFLAGKDNNTKYVSLNTLLKVVPQEPTAVQRHRKFISHCLQDTDVSIRMRALELSFAILD 404
Query: 230 KKTLMEIVKKLMVHMDKAE 248
L+E+V +LM + K +
Sbjct: 405 DSNLVELVNELMKFLAKQD 423
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 55/103 (53%), Gaps = 1/103 (0%)
Query: 3 KILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAE 62
K++ P +VQ HR I CL D D SIR+RAL+L + ++ L+E+V +LM + K +
Sbjct: 364 KVVPQEPTAVQRHRKFISHCLQDTDVSIRMRALELSFAILDDSNLVELVNELMKFLAKQD 423
Query: 63 GTMYRDELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGT 105
+D ++ + + + + + + W + V + ++ G+
Sbjct: 424 EDS-KDLIIYTIDHLIDTFDTRVVKDESWKLDVFFNILKLVGS 465
>sp|Q08951|AP3D_YEAST AP-3 complex subunit delta OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=APL5 PE=1 SV=1
Length = 932
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 80/162 (49%), Gaps = 25/162 (15%)
Query: 3 KILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAE 62
KI K + + LI++ L D D SIR +A++L+ G+V + L IV+ LM +
Sbjct: 340 KIGKINTDFISRFDQLIIRLLSDVDVSIRSKAIELVEGIVDEDNLKAIVQTLMKQFVDED 399
Query: 63 ------GTM---------------YRDELLSKVIDICSQNNYQYITNFEWYMTVLVELT- 100
G++ Y+ ++++ +I ICS +NY + +FEWY V+++L
Sbjct: 400 VVILQTGSIVYEKSKRIPIIIPENYKIKMVNVIISICSADNYSSVNDFEWYNAVIMDLAM 459
Query: 101 ---RMEGTRHGALVAAQMMDVAIRVSAVRAFAVAQMSSLLAS 139
+ G+ + Q ++ I+V ++R +A + L+++
Sbjct: 460 LCQDISDKSLGSKIGEQFRNLMIKVPSMREVTIANIIKLISN 501
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 22/125 (17%)
Query: 173 SRMPNHMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKT 232
S+ PN ++Y+ + KI K + + LI++ L D D SIR +A++L+ G+V +
Sbjct: 325 SQDPN-LRYISCILFYKIGKINTDFISRFDQLIIRLLSDVDVSIRSKAIELVEGIVDEDN 383
Query: 233 LMEIVKKLMVHMDKAE------GTM---------------YRDELLSKVIDICSQNNYQY 271
L IV+ LM + G++ Y+ ++++ +I ICS +NY
Sbjct: 384 LKAIVQTLMKQFVDEDVVILQTGSIVYEKSKRIPIIIPENYKIKMVNVIISICSADNYSS 443
Query: 272 ITNFE 276
+ +FE
Sbjct: 444 VNDFE 448
>sp|Q7QG73|AP2A_ANOGA AP-2 complex subunit alpha OS=Anopheles gambiae GN=alpha-Adaptin
PE=3 SV=4
Length = 934
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 78/133 (58%), Gaps = 6/133 (4%)
Query: 10 KSVQSHRDLIMQCLD-DKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRD 68
++V+ H+++++ + +KD S+R +A+DLLY M + EIV++++ +++ A+ ++ R+
Sbjct: 364 EAVKKHQEVVILSMKMEKDVSVRQQAVDLLYAMCDRSNAEEIVQEMLNYLETADYSI-RE 422
Query: 69 ELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDVAIRVSAVRAF 128
E++ KV + +Y T++ WY+ V++ L R+ G V +++ + I V+ +
Sbjct: 423 EMVLKVAILAE----KYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIVINREEVQGY 478
Query: 129 AVAQMSSLLASPS 141
A + L +P+
Sbjct: 479 AAKTVFEALQAPA 491
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 60/94 (63%), Gaps = 4/94 (4%)
Query: 170 KFSSRMPNHMKYLGLLAMSKILKTH--PKSVQSHRDLIMQCLD-DKDESIRLRALDLLYG 226
+F S +++YL L +M + + ++V+ H+++++ + +KD S+R +A+DLLY
Sbjct: 336 QFLSNRETNLRYLALESMCHLATSEFSHEAVKKHQEVVILSMKMEKDVSVRQQAVDLLYA 395
Query: 227 MVSKKTLMEIVKKLMVHMDKAEGTMYRDELLSKV 260
M + EIV++++ +++ A+ ++ R+E++ KV
Sbjct: 396 MCDRSNAEEIVQEMLNYLETADYSI-REEMVLKV 428
>sp|Q99128|AP1G1_USTMA AP-1 complex subunit gamma-1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=APL4 PE=3 SV=2
Length = 853
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 51/79 (64%)
Query: 170 KFSSRMPNHMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVS 229
KF S N+++Y+ L +SK++ +VQ HR++I+ CL D D SIR RAL+L Y +++
Sbjct: 317 KFLSNRDNNIRYVALNTLSKVVSMDTNAVQRHRNIILDCLRDGDISIRRRALELSYALIN 376
Query: 230 KKTLMEIVKKLMVHMDKAE 248
+ + + ++L+ ++ A+
Sbjct: 377 ESNVRVLTRELLSFLEVAD 395
Score = 52.4 bits (124), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 1 MSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDK 60
+SK++ +VQ HR++I+ CL D D SIR RAL+L Y ++++ + + ++L+ ++
Sbjct: 334 LSKVVSMDTNAVQRHRNIILDCLRDGDISIRRRALELSYALINESNVRVLTRELLSFLEV 393
Query: 61 AEGTMYRDELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEG 104
A+ L IC ++ N W++ ++ + ++ G
Sbjct: 394 ADNEFK----LGMTTQICLAAE-KFAPNKRWHIDTVLRVLKLAG 432
>sp|Q29N38|AP2A_DROPS AP-2 complex subunit alpha OS=Drosophila pseudoobscura
pseudoobscura GN=alpha-Adaptin PE=3 SV=1
Length = 939
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 76/133 (57%), Gaps = 6/133 (4%)
Query: 10 KSVQSHRDLIMQCLD-DKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRD 68
+ V+ H+++++ + +KD S+R A+DLLY M + EIV++++ +++ A+ ++ R+
Sbjct: 364 EEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYLETADYSI-RE 422
Query: 69 ELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDVAIRVSAVRAF 128
E++ KV + +Y T++ WY+ V++ L R+ G V +++ + I V+ +
Sbjct: 423 EMVLKVAILAE----KYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIVINREEVQGY 478
Query: 129 AVAQMSSLLASPS 141
A + L +P+
Sbjct: 479 AAKTVFEALQAPA 491
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 170 KFSSRMPNHMKYLGLLAMSKILKTH--PKSVQSHRDLIMQCLD-DKDESIRLRALDLLYG 226
+F S +++YL L +M + + + V+ H+++++ + +KD S+R A+DLLY
Sbjct: 336 QFLSNRETNLRYLALESMCHLATSEFSHEEVKKHQEVVILSMKMEKDVSVRQMAVDLLYA 395
Query: 227 MVSKKTLMEIVKKLMVHMDKAEGTMYRDELLSKV 260
M + EIV++++ +++ A+ ++ R+E++ KV
Sbjct: 396 MCDRGNAEEIVQEMLNYLETADYSI-REEMVLKV 428
>sp|P91926|AP2A_DROME AP-2 complex subunit alpha OS=Drosophila melanogaster
GN=alpha-Adaptin PE=1 SV=1
Length = 940
Score = 58.2 bits (139), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 76/133 (57%), Gaps = 6/133 (4%)
Query: 10 KSVQSHRDLIMQCLD-DKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRD 68
+ V+ H+++++ + +KD S+R A+DLLY M + EIV++++ +++ A+ ++ R+
Sbjct: 364 EEVKKHQEVVILSMKMEKDVSVRQMAVDLLYAMCDRGNAEEIVQEMLNYLETADYSI-RE 422
Query: 69 ELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDVAIRVSAVRAF 128
E++ KV + +Y T++ WY+ V++ L R+ G V +++ + I V+ +
Sbjct: 423 EMVLKVAILAE----KYATDYTWYVDVILNLIRIAGDYVSEEVWYRVIQIVINREEVQGY 478
Query: 129 AVAQMSSLLASPS 141
A + L +P+
Sbjct: 479 AAKTVFEALQAPA 491
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 58/94 (61%), Gaps = 4/94 (4%)
Query: 170 KFSSRMPNHMKYLGLLAMSKILKTH--PKSVQSHRDLIMQCLD-DKDESIRLRALDLLYG 226
+F S +++YL L +M + + + V+ H+++++ + +KD S+R A+DLLY
Sbjct: 336 QFLSNRETNLRYLALESMCHLATSEFSHEEVKKHQEVVILSMKMEKDVSVRQMAVDLLYA 395
Query: 227 MVSKKTLMEIVKKLMVHMDKAEGTMYRDELLSKV 260
M + EIV++++ +++ A+ ++ R+E++ KV
Sbjct: 396 MCDRGNAEEIVQEMLNYLETADYSI-REEMVLKV 428
>sp|Q9C0W7|AP2A_SCHPO AP-2 complex subunit alpha OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=apl3 PE=3 SV=1
Length = 878
Score = 57.8 bits (138), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 74/129 (57%), Gaps = 5/129 (3%)
Query: 11 SVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRDEL 70
S++ +++LI+ L KD S+R ++L+LLY M ++ IV L+ ++ + ++ +++L
Sbjct: 355 SLKHYKELILSSLRYKDVSLRKKSLELLYMMCDEENAKLIVADLLQYLPHLD-SVTQEDL 413
Query: 71 LSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDVAIRVSAVRAFAV 130
+SKV I + T++EWY+ V ++L R+ G V Q++ V + ++ +A
Sbjct: 414 ISKVAIISE----TFATDYEWYVDVTIQLLRIAGKSADDGVWHQLVHVIVNNEEIQEYAT 469
Query: 131 AQMSSLLAS 139
++ SLL S
Sbjct: 470 KRLFSLLQS 478
Score = 32.7 bits (73), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 197 SVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRDEL 256
S++ +++LI+ L KD S+R ++L+LLY M ++ IV L+ ++ + ++ +++L
Sbjct: 355 SLKHYKELILSSLRYKDVSLRKKSLELLYMMCDEENAKLIVADLLQYLPHLD-SVTQEDL 413
Query: 257 LSKV 260
+SKV
Sbjct: 414 ISKV 417
>sp|Q0VCK5|AP2A2_BOVIN AP-2 complex subunit alpha-2 OS=Bos taurus GN=AP2A2 PE=1 SV=1
Length = 938
Score = 57.0 bits (136), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 74/133 (55%), Gaps = 6/133 (4%)
Query: 10 KSVQSHRDLIMQCLD-DKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRD 68
++V++H + ++ L ++D S+R RA+DLLY M + +IV +++ +++ A+ ++ R+
Sbjct: 364 EAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSYLETADYSI-RE 422
Query: 69 ELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDVAIRVSAVRAF 128
E++ KV + +Y ++ WY+ ++ L R+ G V +++ + I V+ +
Sbjct: 423 EIVLKVAILAE----KYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGY 478
Query: 129 AVAQMSSLLASPS 141
A + L +P+
Sbjct: 479 AAKTVFEALQAPA 491
Score = 45.4 bits (106), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 170 KFSSRMPNHMKYLGLLAMSKILKTH--PKSVQSHRDLIMQCLD-DKDESIRLRALDLLYG 226
+F +++YL L +M + + ++V++H + ++ L ++D S+R RA+DLLY
Sbjct: 336 QFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYA 395
Query: 227 MVSKKTLMEIVKKLMVHMDKAEGTMYRDELLSKV 260
M + +IV +++ +++ A+ ++ R+E++ KV
Sbjct: 396 MCDRSNAQQIVAEMLSYLETADYSI-REEIVLKV 428
>sp|P18484|AP2A2_RAT AP-2 complex subunit alpha-2 OS=Rattus norvegicus GN=Ap2a2 PE=1
SV=3
Length = 938
Score = 57.0 bits (136), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 74/133 (55%), Gaps = 6/133 (4%)
Query: 10 KSVQSHRDLIMQCLD-DKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRD 68
++V++H + ++ L ++D S+R RA+DLLY M + +IV +++ +++ A+ ++ R+
Sbjct: 363 EAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSYLETADYSI-RE 421
Query: 69 ELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDVAIRVSAVRAF 128
E++ KV + +Y ++ WY+ ++ L R+ G V +++ + I V+ +
Sbjct: 422 EIVLKVAILAE----KYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGY 477
Query: 129 AVAQMSSLLASPS 141
A + L +P+
Sbjct: 478 AAKTVFEALQAPA 490
Score = 45.4 bits (106), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 170 KFSSRMPNHMKYLGLLAMSKILKTH--PKSVQSHRDLIMQCLD-DKDESIRLRALDLLYG 226
+F +++YL L +M + + ++V++H + ++ L ++D S+R RA+DLLY
Sbjct: 335 QFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYA 394
Query: 227 MVSKKTLMEIVKKLMVHMDKAEGTMYRDELLSKV 260
M + +IV +++ +++ A+ ++ R+E++ KV
Sbjct: 395 MCDRSNAQQIVAEMLSYLETADYSI-REEIVLKV 427
>sp|P17427|AP2A2_MOUSE AP-2 complex subunit alpha-2 OS=Mus musculus GN=Ap2a2 PE=1 SV=2
Length = 938
Score = 57.0 bits (136), Expect = 1e-07, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 74/133 (55%), Gaps = 6/133 (4%)
Query: 10 KSVQSHRDLIMQCLD-DKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRD 68
++V++H + ++ L ++D S+R RA+DLLY M + +IV +++ +++ A+ ++ R+
Sbjct: 363 EAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAQQIVAEMLSYLETADYSI-RE 421
Query: 69 ELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDVAIRVSAVRAF 128
E++ KV + +Y ++ WY+ ++ L R+ G V +++ + I V+ +
Sbjct: 422 EIVLKVAILAE----KYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGY 477
Query: 129 AVAQMSSLLASPS 141
A + L +P+
Sbjct: 478 AAKTVFEALQAPA 490
Score = 45.4 bits (106), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 170 KFSSRMPNHMKYLGLLAMSKILKTH--PKSVQSHRDLIMQCLD-DKDESIRLRALDLLYG 226
+F +++YL L +M + + ++V++H + ++ L ++D S+R RA+DLLY
Sbjct: 335 QFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYA 394
Query: 227 MVSKKTLMEIVKKLMVHMDKAEGTMYRDELLSKV 260
M + +IV +++ +++ A+ ++ R+E++ KV
Sbjct: 395 MCDRSNAQQIVAEMLSYLETADYSI-REEIVLKV 427
>sp|Q9ZUI6|AP1G2_ARATH AP-1 complex subunit gamma-2 OS=Arabidopsis thaliana GN=At1g60070
PE=2 SV=2
Length = 862
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 59/94 (62%), Gaps = 1/94 (1%)
Query: 170 KFSSRMPNHMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVS 229
KF S N+++Y+ L + + L ++VQ HR I++C+ D D SI+ RAL+L+Y +V+
Sbjct: 319 KFLSNRDNNIRYVALNMLMRSLTVDSQAVQRHRATILECVKDSDASIQKRALELIYLLVN 378
Query: 230 KKTLMEIVKKLMVHMDKAEGTMYRDELLSKVIDI 263
+ + + K+L+ +++ +E ++ +L +K+ I
Sbjct: 379 ENNVKPLAKELIEYLEVSEQD-FKGDLTAKICSI 411
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 10 KSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRDE 69
++VQ HR I++C+ D D SI+ RAL+L+Y +V++ + + K+L+ +++ +E ++ +
Sbjct: 345 QAVQRHRATILECVKDSDASIQKRALELIYLLVNENNVKPLAKELIEYLEVSEQD-FKGD 403
Query: 70 LLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGT 105
L +K+ I + + I WY+ ++++ GT
Sbjct: 404 LTAKICSIVEKFAPEKI----WYIDQMLKVLSEAGT 435
>sp|Q755A1|AP3D_ASHGO AP-3 complex subunit delta OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=APL5 PE=3 SV=1
Length = 899
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 82/154 (53%), Gaps = 17/154 (11%)
Query: 3 KILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLM---VHMD 59
KI K + + + LI++ L D D SIR + L+LL G+V++ L++ V++L+ V +D
Sbjct: 338 KIGKINTDFIANFDVLILRLLVDVDVSIRSKTLELLEGIVTEDNLVDFVQRLLKQFVDVD 397
Query: 60 K-----AEGTM-----YRDELLSKVIDICSQNNYQYITNFEWYMTVLVELT----RMEGT 105
K E ++ Y+ +++ + I + NY +T+FEWY+ +L +L ++
Sbjct: 398 KICVNDQEFSIDIPEYYKSKMIHAICKITAMKNYANVTDFEWYIALLSDLCIVSQDLQDK 457
Query: 106 RHGALVAAQMMDVAIRVSAVRAFAVAQMSSLLAS 139
+ Q+ ++ ++V +R +AQ+ L+ S
Sbjct: 458 TLAQKLGEQIRNIMVKVPDLRDRTLAQIVQLVKS 491
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 65/118 (55%), Gaps = 14/118 (11%)
Query: 172 SSRMPNHMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKK 231
+S PN ++YL + KI K + + + LI++ L D D SIR + L+LL G+V++
Sbjct: 322 TSNDPN-LRYLSCVLFYKIGKINTDFIANFDVLILRLLVDVDVSIRSKTLELLEGIVTED 380
Query: 232 TLMEIVKKLM---VHMDK-----AEGTM-----YRDELLSKVIDICSQNNYQYITNFE 276
L++ V++L+ V +DK E ++ Y+ +++ + I + NY +T+FE
Sbjct: 381 NLVDFVQRLLKQFVDVDKICVNDQEFSIDIPEYYKSKMIHAICKITAMKNYANVTDFE 438
>sp|O94973|AP2A2_HUMAN AP-2 complex subunit alpha-2 OS=Homo sapiens GN=AP2A2 PE=1 SV=2
Length = 939
Score = 56.2 bits (134), Expect = 3e-07, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 74/133 (55%), Gaps = 6/133 (4%)
Query: 10 KSVQSHRDLIMQCLD-DKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRD 68
++V++H + ++ L ++D S+R RA+DLLY M + +IV +++ +++ A+ ++ R+
Sbjct: 363 EAVKTHIETVINALKTERDVSVRQRAVDLLYAMCDRSNAPQIVAEMLSYLETADYSI-RE 421
Query: 69 ELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDVAIRVSAVRAF 128
E++ KV + +Y ++ WY+ ++ L R+ G V +++ + I V+ +
Sbjct: 422 EIVLKVAILAE----KYAVDYTWYVDTILNLIRIAGDYVSEEVWYRVIQIVINRDDVQGY 477
Query: 129 AVAQMSSLLASPS 141
A + L +P+
Sbjct: 478 AAKTVFEALQAPA 490
Score = 44.3 bits (103), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/94 (26%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 170 KFSSRMPNHMKYLGLLAMSKILKTH--PKSVQSHRDLIMQCLD-DKDESIRLRALDLLYG 226
+F +++YL L +M + + ++V++H + ++ L ++D S+R RA+DLLY
Sbjct: 335 QFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIETVINALKTERDVSVRQRAVDLLYA 394
Query: 227 MVSKKTLMEIVKKLMVHMDKAEGTMYRDELLSKV 260
M + +IV +++ +++ A+ ++ R+E++ KV
Sbjct: 395 MCDRSNAPQIVAEMLSYLETADYSI-REEIVLKV 427
>sp|O95782|AP2A1_HUMAN AP-2 complex subunit alpha-1 OS=Homo sapiens GN=AP2A1 PE=1 SV=3
Length = 977
Score = 55.5 bits (132), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 71/133 (53%), Gaps = 6/133 (4%)
Query: 10 KSVQSHRDLIMQCLD-DKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRD 68
++V++H D ++ L ++D S+R RA DLLY M + +IV +++ +++ A+ + R+
Sbjct: 364 EAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAI-RE 422
Query: 69 ELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDVAIRVSAVRAF 128
E++ KV + +Y ++ WY+ ++ L R+ G V +++ + V+ +
Sbjct: 423 EIVLKVAILAE----KYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRDDVQGY 478
Query: 129 AVAQMSSLLASPS 141
A + L +P+
Sbjct: 479 AAKTVFEALQAPA 491
Score = 45.1 bits (105), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 170 KFSSRMPNHMKYLGLLAMSKILKTH--PKSVQSHRDLIMQCLD-DKDESIRLRALDLLYG 226
+F +++YL L +M + + ++V++H D ++ L ++D S+R RA DLLY
Sbjct: 336 QFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIDTVINALKTERDVSVRQRAADLLYA 395
Query: 227 MVSKKTLMEIVKKLMVHMDKAEGTMYRDELLSKV 260
M + +IV +++ +++ A+ + R+E++ KV
Sbjct: 396 MCDRSNAKQIVSEMLRYLETADYAI-REEIVLKV 428
>sp|P17426|AP2A1_MOUSE AP-2 complex subunit alpha-1 OS=Mus musculus GN=Ap2a1 PE=1 SV=1
Length = 977
Score = 55.5 bits (132), Expect = 4e-07, Method: Composition-based stats.
Identities = 32/133 (24%), Positives = 71/133 (53%), Gaps = 6/133 (4%)
Query: 10 KSVQSHRDLIMQCLD-DKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRD 68
++V++H D ++ L ++D S+R RA DLLY M + +IV +++ +++ A+ + R+
Sbjct: 364 EAVKTHIDTVINALKTERDVSVRQRAADLLYAMCDRSNAKQIVSEMLRYLETADYAI-RE 422
Query: 69 ELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDVAIRVSAVRAF 128
E++ KV + +Y ++ WY+ ++ L R+ G V +++ + V+ +
Sbjct: 423 EIVLKVAILAE----KYAVDYSWYVDTILNLIRIAGDYVSEEVWYRVLQIVTNRDDVQGY 478
Query: 129 AVAQMSSLLASPS 141
A + L +P+
Sbjct: 479 AAKTVFEALQAPA 491
Score = 45.1 bits (105), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/94 (27%), Positives = 55/94 (58%), Gaps = 4/94 (4%)
Query: 170 KFSSRMPNHMKYLGLLAMSKILKTH--PKSVQSHRDLIMQCLD-DKDESIRLRALDLLYG 226
+F +++YL L +M + + ++V++H D ++ L ++D S+R RA DLLY
Sbjct: 336 QFLQHRETNLRYLALESMCTLASSEFSHEAVKTHIDTVINALKTERDVSVRQRAADLLYA 395
Query: 227 MVSKKTLMEIVKKLMVHMDKAEGTMYRDELLSKV 260
M + +IV +++ +++ A+ + R+E++ KV
Sbjct: 396 MCDRSNAKQIVSEMLRYLETADYAI-REEIVLKV 428
>sp|Q8L7A9|AP4E_ARATH AP-4 complex subunit epsilon OS=Arabidopsis thaliana GN=At1g31730
PE=1 SV=1
Length = 938
Score = 54.3 bits (129), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 54/97 (55%)
Query: 170 KFSSRMPNHMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVS 229
KF +++KY+G+ + +++K P + H+ ++ CL+D D++++ + +LLY M
Sbjct: 332 KFLKSDSHNLKYMGIDGLGRLIKISPDIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTK 391
Query: 230 KKTLMEIVKKLMVHMDKAEGTMYRDELLSKVIDICSQ 266
+ IV +++ +M Y+ E+ S+ +++ Q
Sbjct: 392 SSNVEVIVDRMIDYMISINDNHYKTEIASRCVELAEQ 428
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/142 (19%), Positives = 68/142 (47%), Gaps = 18/142 (12%)
Query: 1 MSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDK 60
+ +++K P + H+ ++ CL+D D++++ + +LLY M + IV +++ +M
Sbjct: 349 LGRLIKISPDIAEQHQLAVIDCLEDPDDTLKRKTFELLYKMTKSSNVEVIVDRMIDYMIS 408
Query: 61 AEGTMYRDELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMM---- 116
Y+ E+ S+ +++ Q+ + +W++ ++ ++ G VA +M
Sbjct: 409 INDNHYKTEIASRCVELAE----QFAPSNQWFIQIMNKVFEHAGDLVNIKVAHNLMRLIA 464
Query: 117 ----------DVAIRVSAVRAF 128
D +R+SAV ++
Sbjct: 465 EGFGEDDDDADSKLRLSAVESY 486
>sp|Q8LPK4|AP2A2_ARATH AP-2 complex subunit alpha-2 OS=Arabidopsis thaliana GN=ALPHAC-AD
PE=1 SV=1
Length = 1013
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 170 KF-SSRMPNHMKYLGLLAMSKILKTHPKS--VQSHRDLIMQCLDDKDESIRLRALDLLYG 226
KF S R PN ++YLGL M+++L ++ H+ I+ L D D SIR RALDLLYG
Sbjct: 326 KFISVREPN-IRYLGLENMTRMLMVTDVQDIIKKHQSQIITSLKDPDISIRRRALDLLYG 384
Query: 227 MVSKKTLMEIVKKLMVHMDKAEGTMYRDEL 256
M +IV++L+ ++ AE +M R+EL
Sbjct: 385 MCDVSNAKDIVEELLQYLSTAEFSM-REEL 413
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 12 VQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRDELL 71
++ H+ I+ L D D SIR RALDLLYGM +IV++L+ ++ AE +M R+EL
Sbjct: 356 IKKHQSQIITSLKDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFSM-REELS 414
Query: 72 SKVIDICSQNNYQYITNFEWYMTVLVELTRMEG 104
K + ++ + WY+ V+++L G
Sbjct: 415 LKAAILAE----KFAPDLSWYVDVILQLIDKAG 443
>sp|Q8LPL6|AP2A1_ARATH AP-2 complex subunit alpha-1 OS=Arabidopsis thaliana GN=ALPHA-ADR
PE=1 SV=1
Length = 1012
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 5/90 (5%)
Query: 170 KF-SSRMPNHMKYLGLLAMSKILKTHPKS--VQSHRDLIMQCLDDKDESIRLRALDLLYG 226
KF S R PN ++YLGL M+++L ++ H+ I+ L D D SIR RALDLLYG
Sbjct: 326 KFISVREPN-IRYLGLENMTRMLMVTDVQDIIKKHQSQIITSLKDPDISIRRRALDLLYG 384
Query: 227 MVSKKTLMEIVKKLMVHMDKAEGTMYRDEL 256
M +IV++L+ ++ AE +M R+EL
Sbjct: 385 MCDVSNAKDIVEELLQYLSTAEFSM-REEL 413
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 12 VQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRDELL 71
++ H+ I+ L D D SIR RALDLLYGM +IV++L+ ++ AE +M R+EL
Sbjct: 356 IKKHQSQIITSLKDPDISIRRRALDLLYGMCDVSNAKDIVEELLQYLSTAEFSM-REELS 414
Query: 72 SKVIDICSQNNYQYITNFEWYMTVLVELTRMEG 104
K + ++ + WY+ V+++L G
Sbjct: 415 LKAAILAE----KFAPDLSWYVDVILQLIDKAG 443
>sp|Q54VE0|AP4E_DICDI AP-4 complex subunit epsilon OS=Dictyostelium discoideum GN=ap4e1
PE=3 SV=1
Length = 1080
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 178 HMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIV 237
+++Y G+ A++ I+K PK V ++ +++ L+ DE+++ ++ DLLY M ++ ++ +
Sbjct: 388 NLRYFGIKALASIVKVSPKLVLPYQVEVIESLESPDETLKRKSFDLLYKMTNQTNVVPVC 447
Query: 238 KKLMVHMDKAEGTMYRDELLSKVIDIC---SQNNYQYI 272
KL+ + ++ ++ EL+S++ +I S N+ YI
Sbjct: 448 SKLIEQLVLSKDQNFKSELISQITNIAEKYSPNDIWYI 485
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/96 (23%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 1 MSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDK 60
++ I+K PK V ++ +++ L+ DE+++ ++ DLLY M ++ ++ + KL+ +
Sbjct: 397 LASIVKVSPKLVLPYQVEVIESLESPDETLKRKSFDLLYKMTNQTNVVPVCSKLIEQLVL 456
Query: 61 AEGTMYRDELLSKVIDICSQNNYQYITNFEWYMTVL 96
++ ++ EL+S++ +I +Y N WY+ +
Sbjct: 457 SKDQNFKSELISQITNIAE----KYSPNDIWYIDTI 488
>sp|Q5R5M2|AP1G1_PONAB AP-1 complex subunit gamma-1 OS=Pongo abelii GN=AP1G1 PE=2 SV=1
Length = 822
Score = 51.6 bits (122), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%)
Query: 178 HMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIV 237
+++Y+ L ++ K ++T +VQ HR I+ CL D D SI+ RA++L + +V+ + ++
Sbjct: 323 NIRYVALTSLLKTVRTDHNTVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMM 382
Query: 238 KKLMVHMDKAEGTMYRD 254
K+L+ +D E D
Sbjct: 383 KELLYFLDSCEPEFKAD 399
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 73/164 (44%), Gaps = 17/164 (10%)
Query: 3 KILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAE 62
K ++T +VQ HR I+ CL D D SI+ RA++L + +V+ + ++K+L+ +D E
Sbjct: 334 KTVRTDHNTVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCE 393
Query: 63 GTMYRDELLSKVIDICSQNNY----QYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDV 118
D C+ + +Y + W++ ++ + G+ ++ +
Sbjct: 394 PEFKAD---------CASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQL 444
Query: 119 AIRVSAVRAFAVAQM-SSLLASPSPPLSQPSSRMAEMMFDEYSD 161
+ A+ V ++ ++L S QP ++A EY D
Sbjct: 445 ITNSVEMHAYTVQRLYKAILGDYS---QQPLVQVAAWCIGEYGD 485
>sp|Q84K16|AP1G1_ARATH AP-1 complex subunit gamma-1 OS=Arabidopsis thaliana GN=GAMMA-ADR
PE=1 SV=1
Length = 876
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 170 KFSSRMPNHMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVS 229
+F S N+++Y+ L + K + ++VQ HR I++C+ D D SIR RAL+L+ +V+
Sbjct: 319 RFLSNRDNNIRYVALNMLMKAITFDDQAVQRHRVTILECVKDPDASIRKRALELVTLLVN 378
Query: 230 KKTLMEIVKKLMVHMDKAEGTMYRDELLSKV 260
+ + ++ K+L+ +++ ++ ++++L +K+
Sbjct: 379 ENNVTQLTKELIDYLEISDED-FKEDLSAKI 408
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 54/84 (64%), Gaps = 5/84 (5%)
Query: 10 KSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEGTMYRDE 69
++VQ HR I++C+ D D SIR RAL+L+ +V++ + ++ K+L+ +++ ++ ++++
Sbjct: 345 QAVQRHRVTILECVKDPDASIRKRALELVTLLVNENNVTQLTKELIDYLEISDED-FKED 403
Query: 70 LLSKVIDICSQNNYQYITNFEWYM 93
L +K+ I + + + + WY+
Sbjct: 404 LSAKICFIVEKFSPEKL----WYI 423
>sp|O43747|AP1G1_HUMAN AP-1 complex subunit gamma-1 OS=Homo sapiens GN=AP1G1 PE=1 SV=5
Length = 822
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%)
Query: 178 HMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIV 237
+++Y+ L ++ K ++T +VQ HR I+ CL D D SI+ RA++L + +V+ + ++
Sbjct: 323 NIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMM 382
Query: 238 KKLMVHMDKAEGTMYRD 254
K+L+ +D E D
Sbjct: 383 KELLYFLDSCEPEFKAD 399
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 73/164 (44%), Gaps = 17/164 (10%)
Query: 3 KILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAE 62
K ++T +VQ HR I+ CL D D SI+ RA++L + +V+ + ++K+L+ +D E
Sbjct: 334 KTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCE 393
Query: 63 GTMYRDELLSKVIDICSQNNY----QYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDV 118
D C+ + +Y + W++ ++ + G+ ++ +
Sbjct: 394 PEFKAD---------CASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQL 444
Query: 119 AIRVSAVRAFAVAQM-SSLLASPSPPLSQPSSRMAEMMFDEYSD 161
+ A+ V ++ ++L S QP ++A EY D
Sbjct: 445 ITNSVEMHAYTVQRLYKAILGDYS---QQPLVQVAAWCIGEYGD 485
>sp|P22892|AP1G1_MOUSE AP-1 complex subunit gamma-1 OS=Mus musculus GN=Ap1g1 PE=1 SV=3
Length = 822
Score = 51.2 bits (121), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 46/77 (59%)
Query: 178 HMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIV 237
+++Y+ L ++ K ++T +VQ HR I+ CL D D SI+ RA++L + +V+ + ++
Sbjct: 323 NIRYVALTSLLKTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMM 382
Query: 238 KKLMVHMDKAEGTMYRD 254
K+L+ +D E D
Sbjct: 383 KELLYFLDSCEPEFKAD 399
Score = 45.8 bits (107), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/164 (21%), Positives = 73/164 (44%), Gaps = 17/164 (10%)
Query: 3 KILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAE 62
K ++T +VQ HR I+ CL D D SI+ RA++L + +V+ + ++K+L+ +D E
Sbjct: 334 KTVQTDHNAVQRHRSTIVDCLKDLDVSIKRRAMELSFALVNGNNIRGMMKELLYFLDSCE 393
Query: 63 GTMYRDELLSKVIDICSQNNY----QYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDV 118
D C+ + +Y + W++ ++ + G+ ++ +
Sbjct: 394 PEFKAD---------CASGIFLAAEKYAPSKRWHIDTIMRVLTTAGSYVRDDAVPNLIQL 444
Query: 119 AIRVSAVRAFAVAQM-SSLLASPSPPLSQPSSRMAEMMFDEYSD 161
+ A+ V ++ ++L S QP ++A EY D
Sbjct: 445 ITNSVEMHAYTVQRLYKAILGDYS---QQPLVQVAAWCIGEYGD 485
>sp|Q9UU81|AP1G1_SCHPO AP-1 complex subunit gamma-1 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=apl4 PE=3 SV=1
Length = 865
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 4/95 (4%)
Query: 155 MFDEYSDRSSKIFNI----KFSSRMPNHMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLD 210
+ D SD S ++ + KF N+ +Y+ L + ++ + +VQ HR I+ CL+
Sbjct: 324 ILDLNSDSSLRVLGVNILAKFLGNRDNNTRYVALNMLKLVVNSEENAVQRHRSTILACLN 383
Query: 211 DKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMD 245
D D SI+ RAL+L +V++ + +V++L+ +D
Sbjct: 384 DVDSSIQSRALELSTFLVNEANVRFMVRELLSFLD 418
Score = 48.5 bits (114), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 50/101 (49%), Gaps = 5/101 (4%)
Query: 4 ILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAEG 63
++ + +VQ HR I+ CL+D D SI+ RAL+L +V++ + +V++L+ +D
Sbjct: 363 VVNSEENAVQRHRSTILACLNDVDSSIQSRALELSTFLVNEANVRFMVRELLSFLDNVS- 421
Query: 64 TMYRDELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEG 104
DEL ++ + N W+ L+ + + G
Sbjct: 422 ----DELRGSTAQYITEVTNAFAPNKRWHFDTLLRVFKSAG 458
>sp|Q80V94|AP4E1_MOUSE AP-4 complex subunit epsilon-1 OS=Mus musculus GN=Ap4e1 PE=2 SV=3
Length = 1122
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 178 HMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIV 237
++KYLGL A++ +++ P H+ I++CLD D I+ L+LLY + + + ++ IV
Sbjct: 350 NLKYLGLKALTYVIQQDPSLALQHQITIIECLDHPDPIIKRETLELLYRITNAQNVVVIV 409
Query: 238 KKLM--VHMDKAE 248
+K++ +H K E
Sbjct: 410 QKMLEYLHQSKEE 422
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 54/104 (51%), Gaps = 4/104 (3%)
Query: 1 MSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDK 60
++ +++ P H+ I++CLD D I+ L+LLY + + + ++ IV+K++ ++ +
Sbjct: 359 LTYVIQQDPSLALQHQITIIECLDHPDPIIKRETLELLYRITNAQNVVVIVQKMLEYLHQ 418
Query: 61 AEGTMYRDELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEG 104
++ L+ ++ ++ +Y + W++ + + + G
Sbjct: 419 SKEEHIIISLVGRIAELAE----KYAPDNVWFIQTMNAVFSVGG 458
>sp|Q9UPM8|AP4E1_HUMAN AP-4 complex subunit epsilon-1 OS=Homo sapiens GN=AP4E1 PE=1 SV=2
Length = 1137
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 51/86 (59%)
Query: 178 HMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIV 237
++KYLGL A++ +++ P H+ I++CLD D I+ L+LLY + + + + IV
Sbjct: 351 NLKYLGLKALTYVIQQDPTLALQHQMTIIECLDHPDPIIKRETLELLYRITNAQNITVIV 410
Query: 238 KKLMVHMDKAEGTMYRDELLSKVIDI 263
+K++ ++ +++ L+ K+ ++
Sbjct: 411 QKMLEYLHQSKEEYVIVNLVGKIAEL 436
Score = 37.7 bits (86), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 20/104 (19%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 1 MSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDK 60
++ +++ P H+ I++CLD D I+ L+LLY + + + + IV+K++ ++ +
Sbjct: 360 LTYVIQQDPTLALQHQMTIIECLDHPDPIIKRETLELLYRITNAQNITVIVQKMLEYLHQ 419
Query: 61 AEGTMYRDELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEG 104
++ L+ K+ ++ +Y + W++ + + + G
Sbjct: 420 SKEEYVIVNLVGKIAELAE----KYAPDNAWFIQTMNAVFSVGG 459
>sp|O88512|AP1G2_MOUSE AP-1 complex subunit gamma-like 2 OS=Mus musculus GN=Ap1g2 PE=2
SV=2
Length = 791
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 45/77 (58%)
Query: 178 HMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIV 237
+++Y+ L ++ +++++ +VQ HR +++CL + D S+ RAL+L +V+ + ++
Sbjct: 324 NIRYVALTSLLQLVQSDHSAVQRHRSTVVECLQETDASLSRRALELSLALVNSSNVRAMM 383
Query: 238 KKLMVHMDKAEGTMYRD 254
++L ++ + D
Sbjct: 384 QELQAFLESCPPDLRAD 400
Score = 36.6 bits (83), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/159 (18%), Positives = 72/159 (45%), Gaps = 7/159 (4%)
Query: 3 KILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAE 62
+++++ +VQ HR +++CL + D S+ RAL+L +V+ + ++++L ++
Sbjct: 335 QLVQSDHSAVQRHRSTVVECLQETDASLSRRALELSLALVNSSNVRAMMQELQAFLESCP 394
Query: 63 GTMYRDELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDVAIRV 122
+ D + I + ++ ++ + W++ ++ + G A + +
Sbjct: 395 PDLRAD--CASGILLAAE---RFAPSKRWHIDTILHVLTTAGAHVRDDAVANLTQLIGEA 449
Query: 123 SAVRAFAVAQMSSLLASPSPPLSQPSSRMAEMMFDEYSD 161
+ ++V ++ S LA QP ++A EY D
Sbjct: 450 EELHTYSVRRLYSALAEDIS--QQPLVQVAAWCIGEYGD 486
>sp|O75843|AP1G2_HUMAN AP-1 complex subunit gamma-like 2 OS=Homo sapiens GN=AP1G2 PE=1
SV=1
Length = 785
Score = 40.0 bits (92), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 45/77 (58%)
Query: 178 HMKYLGLLAMSKILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIV 237
+++Y+ L ++ +++++ +VQ HR +++CL + D S+ RAL+L +V+ + ++
Sbjct: 324 NIRYVALTSLLRLVQSDHSAVQRHRPTVVECLRETDASLSRRALELSLALVNSSNVRAMM 383
Query: 238 KKLMVHMDKAEGTMYRD 254
++L ++ + D
Sbjct: 384 QELQAFLESCPPDLRAD 400
Score = 38.5 bits (88), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/159 (18%), Positives = 73/159 (45%), Gaps = 7/159 (4%)
Query: 3 KILKTHPKSVQSHRDLIMQCLDDKDESIRLRALDLLYGMVSKKTLMEIVKKLMVHMDKAE 62
+++++ +VQ HR +++CL + D S+ RAL+L +V+ + ++++L ++
Sbjct: 335 RLVQSDHSAVQRHRPTVVECLRETDASLSRRALELSLALVNSSNVRAMMQELQAFLESCP 394
Query: 63 GTMYRDELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGALVAAQMMDVAIRV 122
+ D + I + ++ ++ W++ ++ + GT A + +
Sbjct: 395 PDLRAD--CASGILLAAE---RFAPTKRWHIDTILHVLTTAGTHVRDDAVANLTQLIGGA 449
Query: 123 SAVRAFAVAQMSSLLASPSPPLSQPSSRMAEMMFDEYSD 161
+ A++V ++ + LA QP ++A EY D
Sbjct: 450 QELHAYSVRRLYNALAEDIS--QQPLVQVAAWCIGEYGD 486
>sp|Q0C406|TNAA_HYPNA Tryptophanase OS=Hyphomonas neptunium (strain ATCC 15444) GN=tnaA
PE=3 SV=1
Length = 454
Score = 33.5 bits (75), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Query: 142 PPLSQPSSRMAEMMFDEYSDRSSKIFNIKFSSRMPNHMKYLGLLAMSKILKTHPKSVQSH 201
PPL P + M++ R+ +I + F R P+ + G + + ++ QSH
Sbjct: 356 PPLEYPGQALTCAMYETGGIRACEIGTVMFG-RKPDGTEAPGAMDLVRLAMPRRVYTQSH 414
Query: 202 RDLIMQCLDD 211
D +++ L+D
Sbjct: 415 ADYVVEVLED 424
>sp|Q4JQU7|DPOL_VZVO DNA polymerase catalytic subunit OS=Varicella-zoster virus (strain
Oka vaccine) GN=ORF28 PE=3 SV=1
Length = 1194
Score = 32.7 bits (73), Expect = 3.2, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 51 VKKLMVHMDKAEGTMYRDELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGAL 110
+K L++ K G +Y ++L K +D+ +NN Q+I + Y LVEL + T A
Sbjct: 896 IKLLLITKKKYIGVIYGGKVLMKGVDLVRKNNCQFIND---YARKLVELLLYDDTVSRAA 952
Query: 111 VAAQMMDVA 119
A + +A
Sbjct: 953 AEASCVSIA 961
>sp|P09252|DPOL_VZVD DNA polymerase catalytic subunit OS=Varicella-zoster virus (strain
Dumas) GN=ORF28 PE=3 SV=1
Length = 1194
Score = 32.7 bits (73), Expect = 3.2, Method: Composition-based stats.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 51 VKKLMVHMDKAEGTMYRDELLSKVIDICSQNNYQYITNFEWYMTVLVELTRMEGTRHGAL 110
+K L++ K G +Y ++L K +D+ +NN Q+I + Y LVEL + T A
Sbjct: 896 IKLLLITKKKYIGVIYGGKVLMKGVDLVRKNNCQFIND---YARKLVELLLYDDTVSRAA 952
Query: 111 VAAQMMDVA 119
A + +A
Sbjct: 953 AEASCVSIA 961
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.132 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,483,925
Number of Sequences: 539616
Number of extensions: 3017541
Number of successful extensions: 9307
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 9210
Number of HSP's gapped (non-prelim): 89
length of query: 276
length of database: 191,569,459
effective HSP length: 116
effective length of query: 160
effective length of database: 128,974,003
effective search space: 20635840480
effective search space used: 20635840480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)