BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy16369
         (101 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9V778|ADAS_DROME Alkyldihydroxyacetonephosphate synthase OS=Drosophila melanogaster
           GN=CG10253 PE=2 SV=1
          Length = 631

 Score = 62.4 bits (150), Expect = 7e-10,   Method: Composition-based stats.
 Identities = 28/44 (63%), Positives = 34/44 (77%)

Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           GD +DV++ +A IY +A KF G PAG  NG RGY+LTFVIAYIR
Sbjct: 424 GDLKDVQRQEALIYEIAEKFQGFPAGGQNGERGYILTFVIAYIR 467


>sp|O00116|ADAS_HUMAN Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Homo
           sapiens GN=AGPS PE=1 SV=1
          Length = 658

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/44 (59%), Positives = 35/44 (79%)

Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           GD E V +++ ++Y +A KFGG+ AGE NG RGY+LT+VIAYIR
Sbjct: 472 GDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIR 515


>sp|Q8C0I1|ADAS_MOUSE Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Mus
           musculus GN=Agps PE=1 SV=1
          Length = 645

 Score = 61.6 bits (148), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 26/44 (59%), Positives = 35/44 (79%)

Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           GD E V +++ ++Y +A KFGG+ AGE NG RGY+LT+VIAYIR
Sbjct: 459 GDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYIR 502


>sp|P97275|ADAS_CAVPO Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Cavia
           porcellus GN=AGPS PE=1 SV=1
          Length = 658

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/44 (56%), Positives = 35/44 (79%)

Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           GD E V +++ ++Y +A KFGG+ AGE NG RGY+LT+VIAY+R
Sbjct: 472 GDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMR 515


>sp|Q9EQR2|ADAS_RAT Alkyldihydroxyacetonephosphate synthase, peroxisomal OS=Rattus
           norvegicus GN=Agps PE=2 SV=1
          Length = 644

 Score = 60.5 bits (145), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 25/44 (56%), Positives = 35/44 (79%)

Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIR 95
           GD E V +++ ++Y +A KFGG+ AGE NG RGY+LT+VIAY+R
Sbjct: 458 GDREKVLQHEKQVYDIAAKFGGLAAGEDNGQRGYLLTYVIAYMR 501


>sp|O45218|ADAS_CAEEL Alkyldihydroxyacetonephosphate synthase OS=Caenorhabditis elegans
           GN=ads-1 PE=2 SV=1
          Length = 597

 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 19/48 (39%), Positives = 31/48 (64%)

Query: 52  GDPEDVKKNQAKIYSVALKFGGIPAGETNGMRGYMLTFVIAYIRIVPM 99
           G+ E+V +++ ++  +A +F G+  G  NG  GY LTF IAY+R + M
Sbjct: 401 GNREEVDQHEERLNKLAEQFHGVVGGAENGQYGYRLTFAIAYLRDLGM 448


>sp|Q9MA60|FH11_ARATH Formin-like protein 11 OS=Arabidopsis thaliana GN=FH11 PE=2 SV=1
          Length = 884

 Score = 31.2 bits (69), Expect = 1.8,   Method: Composition-based stats.
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 13  NRYLVETSTSYSRPRHYPLTDMRENEKPGIDSFGKPDS--HGDPEDVKKNQAKIYSVALK 70
           NR  V + +S+ R     L ++RE+EK  ++  G+     HGD    +KN  +I+ +   
Sbjct: 797 NRAFVSSMSSFLRYGEKSLEELREDEKRIMERVGEIAEYFHGDVRGDEKNPLRIFVIVRD 856

Query: 71  FGGI 74
           F G+
Sbjct: 857 FLGM 860


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.137    0.401 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,490,006
Number of Sequences: 539616
Number of extensions: 1577167
Number of successful extensions: 3253
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 3245
Number of HSP's gapped (non-prelim): 12
length of query: 101
length of database: 191,569,459
effective HSP length: 70
effective length of query: 31
effective length of database: 153,796,339
effective search space: 4767686509
effective search space used: 4767686509
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)