Query psy16373
Match_columns 166
No_of_seqs 273 out of 1146
Neff 11.4
Searched_HMMs 29240
Date Fri Aug 16 19:39:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16373.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16373hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ynn_A Coatomer subunit beta'; 100.0 9.2E-29 3.2E-33 170.0 20.5 152 4-162 22-179 (304)
2 3ow8_A WD repeat-containing pr 100.0 3.2E-28 1.1E-32 168.6 20.2 153 4-163 131-287 (321)
3 1vyh_C Platelet-activating fac 100.0 2.2E-28 7.5E-33 174.4 19.0 152 5-163 118-273 (410)
4 4gqb_B Methylosome protein 50; 100.0 1.1E-27 3.8E-32 167.3 21.1 154 9-165 95-256 (344)
5 1got_B GT-beta; complex (GTP-b 100.0 1.5E-27 5.1E-32 166.3 21.6 157 4-163 106-265 (340)
6 3ow8_A WD repeat-containing pr 100.0 5.9E-28 2E-32 167.2 18.0 143 4-153 173-319 (321)
7 2ynn_A Coatomer subunit beta'; 100.0 2.3E-27 7.9E-32 163.0 20.6 155 4-164 106-268 (304)
8 3frx_A Guanine nucleotide-bind 100.0 3.9E-27 1.3E-31 162.9 21.5 154 7-163 30-193 (319)
9 4ery_A WD repeat-containing pr 100.0 4.7E-27 1.6E-31 161.6 20.4 152 4-162 32-187 (312)
10 2hes_X YDR267CP; beta-propelle 100.0 2.4E-27 8.2E-32 164.6 18.7 153 4-156 67-231 (330)
11 4gqb_B Methylosome protein 50; 100.0 1.9E-27 6.4E-32 166.2 18.2 150 4-160 136-294 (344)
12 2pbi_B Guanine nucleotide-bind 100.0 1.2E-26 4.1E-31 162.6 21.7 158 4-162 115-278 (354)
13 1vyh_C Platelet-activating fac 100.0 8.8E-27 3E-31 166.2 21.3 153 5-164 202-378 (410)
14 3frx_A Guanine nucleotide-bind 100.0 2.4E-26 8.1E-31 159.0 21.3 153 4-164 74-236 (319)
15 2xzm_R RACK1; ribosome, transl 100.0 4.5E-26 1.5E-30 158.9 21.4 155 6-162 38-209 (343)
16 1got_B GT-beta; complex (GTP-b 100.0 4.1E-26 1.4E-30 159.0 21.1 149 9-164 156-310 (340)
17 2pm7_B Protein transport prote 100.0 2.9E-26 1E-30 157.0 19.8 149 4-157 18-191 (297)
18 2hes_X YDR267CP; beta-propelle 100.0 4.4E-26 1.5E-30 158.3 19.9 150 9-163 26-194 (330)
19 2pbi_B Guanine nucleotide-bind 100.0 1.1E-25 3.6E-30 157.8 21.7 151 6-163 165-323 (354)
20 3fm0_A Protein CIAO1; WDR39,SG 99.9 4.5E-26 1.5E-30 159.1 19.2 151 4-158 25-184 (345)
21 3iz6_a 40S ribosomal protein R 99.9 2.3E-26 7.7E-31 162.5 17.0 147 6-158 217-378 (380)
22 1nr0_A Actin interacting prote 99.9 9.3E-26 3.2E-30 168.0 20.2 160 4-163 68-278 (611)
23 4ery_A WD repeat-containing pr 99.9 3.3E-25 1.1E-29 152.4 21.4 153 4-163 74-231 (312)
24 3fm0_A Protein CIAO1; WDR39,SG 99.9 8.4E-26 2.9E-30 157.8 18.4 147 4-155 70-225 (345)
25 3iz6_a 40S ribosomal protein R 99.9 1.2E-26 4E-31 164.0 14.2 160 4-163 117-288 (380)
26 4g56_B MGC81050 protein; prote 99.9 7.6E-26 2.6E-30 158.7 17.4 146 7-158 194-346 (357)
27 2aq5_A Coronin-1A; WD40 repeat 99.9 2.8E-25 9.6E-30 157.7 19.9 152 8-162 48-214 (402)
28 3v7d_B Cell division control p 99.9 6.5E-25 2.2E-29 158.2 21.8 158 6-163 216-389 (464)
29 1nr0_A Actin interacting prote 99.9 3.6E-25 1.2E-29 164.9 20.6 146 8-160 161-360 (611)
30 4g56_B MGC81050 protein; prote 99.9 2E-25 6.9E-30 156.6 18.1 157 4-163 51-221 (357)
31 2pm7_B Protein transport prote 99.9 8.8E-25 3E-29 149.7 19.8 145 7-156 67-239 (297)
32 3dm0_A Maltose-binding peripla 99.9 9.2E-25 3.2E-29 164.6 20.8 156 7-164 395-559 (694)
33 1erj_A Transcriptional repress 99.9 4E-25 1.4E-29 156.7 17.6 151 6-156 218-390 (393)
34 3bg1_A Protein SEC13 homolog; 99.9 6.7E-26 2.3E-30 156.5 13.1 148 4-156 22-199 (316)
35 4h5i_A Guanine nucleotide-exch 99.9 7E-25 2.4E-29 154.3 18.5 146 4-155 185-343 (365)
36 3f3f_A Nucleoporin SEH1; struc 99.9 2.1E-24 7.3E-29 149.1 20.1 157 7-163 71-345 (351)
37 1erj_A Transcriptional repress 99.9 2.1E-24 7E-29 153.1 19.8 145 5-157 133-289 (393)
38 4aez_A CDC20, WD repeat-contai 99.9 2.9E-24 9.9E-29 152.6 20.3 153 5-164 144-302 (401)
39 3vl1_A 26S proteasome regulato 99.9 4.7E-25 1.6E-29 156.9 16.1 152 5-163 107-286 (420)
40 4e54_B DNA damage-binding prot 99.9 4E-25 1.4E-29 158.6 15.2 151 7-162 132-334 (435)
41 1gxr_A ESG1, transducin-like e 99.9 6.5E-24 2.2E-28 146.6 20.8 158 4-164 60-223 (337)
42 2aq5_A Coronin-1A; WD40 repeat 99.9 1.3E-24 4.6E-29 154.2 17.7 153 6-158 93-257 (402)
43 2xzm_R RACK1; ribosome, transl 99.9 1.1E-23 3.6E-28 146.9 21.7 143 5-155 86-244 (343)
44 2ymu_A WD-40 repeat protein; u 99.9 1.8E-24 6.2E-29 159.4 18.7 139 4-152 435-577 (577)
45 3dm0_A Maltose-binding peripla 99.9 2.3E-24 7.7E-29 162.5 19.4 153 4-163 439-600 (694)
46 1p22_A F-BOX/WD-repeat protein 99.9 4.1E-24 1.4E-28 153.2 19.6 150 6-164 142-294 (435)
47 3vl1_A 26S proteasome regulato 99.9 1.1E-24 3.7E-29 155.0 16.4 153 4-164 65-221 (420)
48 2j04_B YDR362CP, TAU91; beta p 99.9 6.4E-25 2.2E-29 160.8 15.5 157 7-163 225-394 (524)
49 2oaj_A Protein SNI1; WD40 repe 99.9 2.2E-24 7.5E-29 166.6 19.1 158 4-163 444-672 (902)
50 1p22_A F-BOX/WD-repeat protein 99.9 6.4E-24 2.2E-28 152.2 19.9 150 6-164 182-334 (435)
51 1sq9_A Antiviral protein SKI8; 99.9 4E-24 1.4E-28 151.0 18.6 145 5-157 196-397 (397)
52 2ovr_B FBW7, F-BOX/WD repeat p 99.9 4.1E-24 1.4E-28 153.5 18.9 149 6-163 128-276 (445)
53 3f3f_A Nucleoporin SEH1; struc 99.9 7.7E-24 2.6E-28 146.3 19.0 150 4-156 20-250 (351)
54 3odt_A Protein DOA1; ubiquitin 99.9 8.1E-24 2.8E-28 144.8 18.8 149 6-164 154-305 (313)
55 3dwl_C Actin-related protein 2 99.9 4.7E-25 1.6E-29 155.0 12.9 154 5-163 65-248 (377)
56 3k26_A Polycomb protein EED; W 99.9 7.5E-24 2.6E-28 147.7 19.0 152 7-161 35-198 (366)
57 3dwl_C Actin-related protein 2 99.9 5.2E-25 1.8E-29 154.8 13.1 147 4-155 20-177 (377)
58 2j04_B YDR362CP, TAU91; beta p 99.9 4.9E-25 1.7E-29 161.4 13.4 142 8-155 278-428 (524)
59 3jrp_A Fusion protein of prote 99.9 8.9E-24 3E-28 148.0 19.2 151 4-159 20-195 (379)
60 3lrv_A PRE-mRNA-splicing facto 99.9 6E-24 2.1E-28 148.1 18.1 120 42-162 123-251 (343)
61 4aow_A Guanine nucleotide-bind 99.9 3.7E-23 1.3E-27 143.1 21.9 156 7-164 51-255 (340)
62 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.7E-23 5.7E-28 150.3 20.5 149 7-164 169-317 (445)
63 3ei3_B DNA damage-binding prot 99.9 3.2E-23 1.1E-27 146.1 21.1 151 6-163 130-290 (383)
64 3k26_A Polycomb protein EED; W 99.9 3.4E-24 1.2E-28 149.5 15.9 145 7-158 85-263 (366)
65 4gq1_A NUP37; propeller, trans 99.9 2.4E-24 8.1E-29 152.9 15.1 156 5-162 99-293 (393)
66 2ymu_A WD-40 repeat protein; u 99.9 1.3E-23 4.4E-28 154.9 19.4 150 4-164 394-547 (577)
67 3v7d_B Cell division control p 99.9 1.8E-23 6E-28 150.7 19.6 152 6-164 131-308 (464)
68 3sfz_A APAF-1, apoptotic pepti 99.9 1.3E-23 4.5E-28 166.4 20.1 153 4-163 624-782 (1249)
69 3gre_A Serine/threonine-protei 99.9 3E-23 1E-27 148.5 20.0 159 5-163 121-300 (437)
70 1k8k_C P40, ARP2/3 complex 41 99.9 2.7E-23 9.3E-28 145.4 19.0 155 5-164 62-242 (372)
71 1sq9_A Antiviral protein SKI8; 99.9 1.1E-23 3.7E-28 148.8 16.9 156 5-163 135-330 (397)
72 2xyi_A Probable histone-bindin 99.9 3E-23 1E-27 148.7 19.4 147 9-155 196-353 (430)
73 3mkq_A Coatomer beta'-subunit; 99.9 3E-23 1E-27 158.2 20.1 153 4-163 22-180 (814)
74 4aow_A Guanine nucleotide-bind 99.9 5E-23 1.7E-27 142.5 19.3 151 6-163 139-294 (340)
75 3gre_A Serine/threonine-protei 99.9 1E-23 3.5E-28 150.9 16.0 152 6-164 181-368 (437)
76 3ei3_B DNA damage-binding prot 99.9 5E-23 1.7E-27 145.1 18.8 148 8-162 87-247 (383)
77 3bg1_A Protein SEC13 homolog; 99.9 4.3E-24 1.5E-28 147.5 12.6 144 7-155 71-247 (316)
78 3odt_A Protein DOA1; ubiquitin 99.9 9.4E-23 3.2E-27 139.5 19.1 148 6-165 113-265 (313)
79 3mmy_A MRNA export factor; mRN 99.9 1.2E-22 4.1E-27 141.6 19.9 105 7-117 54-162 (368)
80 3dw8_B Serine/threonine-protei 99.9 3.4E-23 1.1E-27 148.3 17.5 154 4-158 37-261 (447)
81 2vdu_B TRNA (guanine-N(7)-)-me 99.9 5E-23 1.7E-27 148.2 18.1 152 6-164 113-280 (450)
82 1gxr_A ESG1, transducin-like e 99.9 2.5E-22 8.7E-27 138.6 20.6 149 5-159 107-259 (337)
83 2xyi_A Probable histone-bindin 99.9 1.7E-22 5.7E-27 144.8 19.7 157 7-163 141-318 (430)
84 3zwl_B Eukaryotic translation 99.9 2.5E-22 8.5E-27 140.1 19.9 152 4-163 41-257 (369)
85 3jrp_A Fusion protein of prote 99.9 3.2E-22 1.1E-26 140.1 20.4 146 7-157 69-242 (379)
86 4aez_A CDC20, WD repeat-contai 99.9 1.6E-22 5.5E-27 143.6 18.9 147 8-163 104-256 (401)
87 1pgu_A Actin interacting prote 99.9 5.4E-23 1.8E-27 152.2 17.1 143 7-155 456-614 (615)
88 1k8k_C P40, ARP2/3 complex 41 99.9 2.4E-22 8.2E-27 140.6 19.5 146 4-154 17-172 (372)
89 3vu4_A KMHSV2; beta-propeller 99.9 5.6E-22 1.9E-26 139.0 20.9 103 55-157 148-273 (355)
90 4gga_A P55CDC, cell division c 99.9 2.6E-22 9E-27 143.3 19.5 153 5-161 240-401 (420)
91 3zwl_B Eukaryotic translation 99.9 1.5E-22 5.3E-27 141.1 17.9 151 5-162 185-353 (369)
92 3jro_A Fusion protein of prote 99.9 1.3E-22 4.5E-27 154.3 18.7 150 4-158 18-192 (753)
93 1r5m_A SIR4-interacting protei 99.9 2.2E-22 7.4E-27 142.8 18.4 142 8-157 218-363 (425)
94 4a11_B DNA excision repair pro 99.9 4.7E-22 1.6E-26 140.5 19.9 150 6-162 155-372 (408)
95 3dw8_B Serine/threonine-protei 99.9 3.6E-22 1.2E-26 143.0 19.1 155 8-164 108-325 (447)
96 3mmy_A MRNA export factor; mRN 99.9 1.9E-22 6.4E-27 140.6 17.2 130 35-165 30-170 (368)
97 3i2n_A WD repeat-containing pr 99.9 2.9E-22 9.8E-27 139.4 17.9 147 4-158 177-356 (357)
98 2pm9_A Protein WEB1, protein t 99.9 8.4E-23 2.9E-27 144.9 14.4 158 7-164 126-303 (416)
99 4ggc_A P55CDC, cell division c 99.9 1.1E-21 3.9E-26 134.5 19.3 155 4-158 76-318 (318)
100 1pgu_A Actin interacting prote 99.9 1.5E-21 5.2E-26 144.5 21.3 126 40-165 156-293 (615)
101 2pm9_A Protein WEB1, protein t 99.9 1.7E-22 5.7E-27 143.4 15.5 147 7-160 178-342 (416)
102 3lrv_A PRE-mRNA-splicing facto 99.9 1.8E-22 6.2E-27 140.6 15.2 146 6-159 138-296 (343)
103 1r5m_A SIR4-interacting protei 99.9 2.3E-22 7.8E-27 142.6 16.0 142 6-154 258-424 (425)
104 3i2n_A WD repeat-containing pr 99.9 1.1E-21 3.6E-26 136.5 17.9 149 8-162 32-206 (357)
105 2oaj_A Protein SNI1; WD40 repe 99.9 8.5E-22 2.9E-26 152.3 18.7 143 9-160 71-247 (902)
106 2w18_A PALB2, fancn, partner a 99.9 5.8E-22 2E-26 136.7 15.6 138 7-153 193-355 (356)
107 1yfq_A Cell cycle arrest prote 99.9 9.6E-22 3.3E-26 136.2 16.4 147 5-158 21-183 (342)
108 2w18_A PALB2, fancn, partner a 99.9 3E-21 1E-25 133.1 18.5 143 15-163 155-322 (356)
109 3mkq_A Coatomer beta'-subunit; 99.9 2.3E-21 8E-26 147.8 19.8 155 4-164 106-268 (814)
110 4gq1_A NUP37; propeller, trans 99.9 2.1E-21 7E-26 137.8 18.1 109 53-161 100-224 (393)
111 2vdu_B TRNA (guanine-N(7)-)-me 99.9 7.3E-21 2.5E-25 136.9 20.4 155 5-163 159-352 (450)
112 3jro_A Fusion protein of prote 99.9 2.1E-21 7E-26 147.8 18.1 146 7-157 67-240 (753)
113 3vu4_A KMHSV2; beta-propeller 99.9 2.6E-21 9E-26 135.5 17.3 146 13-158 155-339 (355)
114 1yfq_A Cell cycle arrest prote 99.9 3.8E-21 1.3E-25 133.2 17.6 157 7-164 112-291 (342)
115 2j04_A TAU60, YPL007P, hypothe 99.9 2E-21 6.7E-26 141.7 15.9 142 4-158 94-257 (588)
116 4gga_A P55CDC, cell division c 99.9 2.7E-20 9.1E-25 132.9 20.6 154 4-164 156-319 (420)
117 2oit_A Nucleoporin 214KDA; NH2 99.9 2.8E-21 9.7E-26 138.8 15.6 120 42-162 90-229 (434)
118 3sfz_A APAF-1, apoptotic pepti 99.9 5.7E-21 2E-25 151.5 18.6 126 38-163 609-740 (1249)
119 4a11_B DNA excision repair pro 99.9 1.6E-20 5.4E-25 132.6 19.0 151 6-157 55-220 (408)
120 2j04_A TAU60, YPL007P, hypothe 99.9 8.5E-21 2.9E-25 138.4 17.2 150 4-158 24-214 (588)
121 4h5i_A Guanine nucleotide-exch 99.9 3.5E-20 1.2E-24 130.3 18.4 144 10-162 150-307 (365)
122 4ggc_A P55CDC, cell division c 99.9 9.3E-20 3.2E-24 125.0 19.8 143 9-159 38-185 (318)
123 4e54_B DNA damage-binding prot 99.9 1.2E-20 4.2E-25 135.3 13.6 151 5-163 219-395 (435)
124 2oit_A Nucleoporin 214KDA; NH2 99.8 2E-19 6.8E-24 129.2 16.9 150 6-156 103-279 (434)
125 3bws_A Protein LP49; two-domai 99.8 8E-19 2.8E-23 125.3 18.4 155 6-163 133-300 (433)
126 1l0q_A Surface layer protein; 99.8 5.8E-18 2E-22 119.4 21.3 148 7-164 2-156 (391)
127 3bws_A Protein LP49; two-domai 99.8 1.3E-16 4.6E-21 113.8 20.2 150 5-163 179-342 (433)
128 1l0q_A Surface layer protein; 99.8 2.8E-16 9.5E-21 110.8 20.7 147 8-164 45-198 (391)
129 2hqs_A Protein TOLB; TOLB, PAL 99.7 3.2E-14 1.1E-18 101.6 20.0 132 17-158 159-303 (415)
130 1nir_A Nitrite reductase; hemo 99.6 1.8E-13 6E-18 100.9 20.3 146 5-160 147-316 (543)
131 2hqs_A Protein TOLB; TOLB, PAL 99.6 2.1E-13 7.2E-18 97.4 19.1 145 4-158 187-347 (415)
132 3vgz_A Uncharacterized protein 99.6 9.6E-13 3.3E-17 91.3 20.3 150 8-164 102-271 (353)
133 1ri6_A Putative isomerase YBHE 99.6 3E-13 1E-17 93.3 15.5 147 5-158 3-164 (343)
134 3u4y_A Uncharacterized protein 99.6 2E-12 6.8E-17 89.1 19.3 145 5-158 8-163 (331)
135 1nir_A Nitrite reductase; hemo 99.5 5.5E-13 1.9E-17 98.3 15.0 110 53-164 148-266 (543)
136 3vgz_A Uncharacterized protein 99.5 3.3E-12 1.1E-16 88.6 17.8 142 14-164 161-312 (353)
137 1xip_A Nucleoporin NUP159; bet 99.5 1E-12 3.4E-17 92.8 15.2 149 4-162 46-200 (388)
138 2ojh_A Uncharacterized protein 99.5 2.8E-12 9.4E-17 86.5 16.7 115 46-160 130-263 (297)
139 1pby_B Quinohemoprotein amine 99.5 5.2E-12 1.8E-16 86.9 16.4 76 87-165 243-320 (337)
140 1pby_B Quinohemoprotein amine 99.5 3.1E-12 1E-16 88.1 15.2 147 8-164 2-172 (337)
141 2ecf_A Dipeptidyl peptidase IV 99.5 2.5E-12 8.4E-17 97.6 14.9 99 46-146 110-230 (741)
142 1jmx_B Amine dehydrogenase; ox 99.5 4.1E-12 1.4E-16 87.9 14.8 76 87-165 257-335 (349)
143 3u4y_A Uncharacterized protein 99.5 3.8E-11 1.3E-15 82.7 19.3 149 8-163 53-218 (331)
144 1xfd_A DIP, dipeptidyl aminope 99.5 1.5E-12 5.1E-17 98.5 13.1 148 6-162 27-244 (723)
145 3o4h_A Acylamino-acid-releasin 99.4 1.7E-12 5.8E-17 96.2 12.9 138 7-159 123-278 (582)
146 2ojh_A Uncharacterized protein 99.4 1E-11 3.5E-16 83.7 15.6 134 10-154 15-159 (297)
147 1ri6_A Putative isomerase YBHE 99.4 1.8E-11 6.3E-16 84.3 16.6 142 9-155 52-209 (343)
148 1k32_A Tricorn protease; prote 99.4 4.6E-12 1.6E-16 99.7 15.0 117 40-157 332-463 (1045)
149 1k32_A Tricorn protease; prote 99.4 1.5E-11 5.1E-16 96.8 16.7 115 41-156 375-503 (1045)
150 1jmx_B Amine dehydrogenase; ox 99.4 1.1E-11 3.9E-16 85.6 14.4 150 4-163 8-183 (349)
151 1xfd_A DIP, dipeptidyl aminope 99.4 6.2E-12 2.1E-16 95.2 13.9 153 4-162 69-296 (723)
152 2z3z_A Dipeptidyl aminopeptida 99.4 3.3E-11 1.1E-15 91.1 15.7 134 17-159 101-297 (706)
153 3scy_A Hypothetical bacterial 99.4 3.9E-10 1.3E-14 78.7 19.9 150 8-159 168-343 (361)
154 2ecf_A Dipeptidyl peptidase IV 99.3 1.8E-11 6.2E-16 92.9 12.2 115 44-160 36-186 (741)
155 3hfq_A Uncharacterized protein 99.3 6.9E-10 2.4E-14 77.0 18.2 148 8-159 153-323 (347)
156 3hfq_A Uncharacterized protein 99.3 3.1E-10 1.1E-14 78.8 16.3 139 14-157 13-174 (347)
157 1q7f_A NHL, brain tumor CG1071 99.3 1E-09 3.5E-14 74.2 18.5 143 7-159 132-284 (286)
158 3scy_A Hypothetical bacterial 99.3 4.9E-09 1.7E-13 73.1 20.5 146 8-154 111-290 (361)
159 3no2_A Uncharacterized protein 99.2 1.2E-09 4.3E-14 73.9 16.3 148 5-164 3-163 (276)
160 1z68_A Fibroblast activation p 99.2 1.2E-10 4E-15 88.3 11.9 129 7-145 27-189 (719)
161 2z3z_A Dipeptidyl aminopeptida 99.2 3.9E-10 1.3E-14 85.2 14.4 116 42-157 255-393 (706)
162 3o4h_A Acylamino-acid-releasin 99.2 7.6E-10 2.6E-14 82.0 14.9 109 47-159 114-231 (582)
163 3fvz_A Peptidyl-glycine alpha- 99.1 2.3E-08 7.7E-13 69.2 18.8 121 42-163 88-235 (329)
164 3fvz_A Peptidyl-glycine alpha- 99.1 2.2E-08 7.6E-13 69.2 18.4 149 7-162 102-284 (329)
165 3azo_A Aminopeptidase; POP fam 99.1 2.1E-09 7.2E-14 80.7 14.1 115 43-158 128-277 (662)
166 1z68_A Fibroblast activation p 99.1 2.8E-10 9.7E-15 86.2 9.4 149 4-161 68-297 (719)
167 1q7f_A NHL, brain tumor CG1071 99.1 3.6E-08 1.2E-12 66.5 18.4 118 43-163 119-245 (286)
168 1xip_A Nucleoporin NUP159; bet 99.1 1E-08 3.5E-13 72.5 15.6 116 8-137 98-224 (388)
169 1jof_A Carboxy-CIS,CIS-muconat 99.1 1.5E-07 5.2E-12 65.9 20.7 141 15-158 117-295 (365)
170 4a5s_A Dipeptidyl peptidase 4 99.0 1.5E-08 5E-13 77.3 15.7 127 7-144 28-190 (740)
171 3no2_A Uncharacterized protein 99.0 1.2E-08 4E-13 69.1 13.1 107 54-164 5-116 (276)
172 1jof_A Carboxy-CIS,CIS-muconat 99.0 3.6E-08 1.2E-12 69.0 15.8 144 9-156 159-342 (365)
173 4a5s_A Dipeptidyl peptidase 4 99.0 1.2E-09 4.1E-14 83.3 8.6 110 46-159 18-145 (740)
174 3dsm_A Uncharacterized protein 99.0 4.4E-08 1.5E-12 67.8 15.7 118 46-164 45-170 (328)
175 3azo_A Aminopeptidase; POP fam 99.0 9.7E-09 3.3E-13 77.1 12.8 115 42-157 185-327 (662)
176 2oiz_A Aromatic amine dehydrog 99.0 5.1E-09 1.7E-13 73.5 9.4 100 62-163 29-149 (361)
177 3pe7_A Oligogalacturonate lyas 98.9 4.2E-08 1.4E-12 68.9 13.8 111 50-160 41-182 (388)
178 1rwi_B Serine/threonine-protei 98.9 7.6E-08 2.6E-12 64.3 14.5 115 45-159 150-268 (270)
179 1qks_A Cytochrome CD1 nitrite 98.9 8.8E-07 3E-11 65.8 20.3 108 6-122 166-282 (567)
180 2dg1_A DRP35, lactonase; beta 98.9 3.4E-07 1.2E-11 63.1 16.9 119 39-157 39-173 (333)
181 2hz6_A Endoplasmic reticulum t 98.9 1.1E-10 3.9E-15 82.1 -0.8 143 8-164 10-158 (369)
182 2oiz_A Aromatic amine dehydrog 98.9 6.6E-08 2.3E-12 67.8 13.0 107 53-162 210-343 (361)
183 3pe7_A Oligogalacturonate lyas 98.9 2.2E-07 7.4E-12 65.2 15.3 115 42-157 78-227 (388)
184 1qks_A Cytochrome CD1 nitrite 98.9 1.6E-07 5.5E-12 69.7 15.1 110 53-164 166-284 (567)
185 3dsm_A Uncharacterized protein 98.9 3.8E-07 1.3E-11 63.1 15.7 110 47-159 133-257 (328)
186 2dg1_A DRP35, lactonase; beta 98.8 2.3E-06 7.9E-11 58.8 19.6 141 7-155 56-213 (333)
187 2bkl_A Prolyl endopeptidase; m 98.8 6.4E-08 2.2E-12 73.4 12.0 114 42-157 118-263 (695)
188 2hz6_A Endoplasmic reticulum t 98.8 6.2E-10 2.1E-14 78.4 1.0 110 53-164 8-120 (369)
189 2xdw_A Prolyl endopeptidase; a 98.8 1.2E-07 4.2E-12 72.0 13.4 112 43-155 123-268 (710)
190 3e5z_A Putative gluconolactona 98.8 2.6E-07 8.8E-12 62.7 13.7 115 46-164 116-254 (296)
191 1rwi_B Serine/threonine-protei 98.8 1E-06 3.5E-11 58.7 15.6 113 45-157 108-224 (270)
192 2bkl_A Prolyl endopeptidase; m 98.7 7.8E-07 2.7E-11 67.5 15.7 138 12-157 142-306 (695)
193 3q7m_A Lipoprotein YFGL, BAMB; 98.7 2.7E-06 9.3E-11 59.7 17.1 114 49-164 98-216 (376)
194 3sjl_D Methylamine dehydrogena 98.7 1.7E-07 5.9E-12 66.1 10.9 111 53-165 43-179 (386)
195 3nok_A Glutaminyl cyclase; bet 98.7 4.7E-06 1.6E-10 55.7 16.5 116 47-164 57-173 (268)
196 2gop_A Trilobed protease; beta 98.7 1.4E-06 4.7E-11 60.2 14.4 109 47-162 17-168 (347)
197 2gop_A Trilobed protease; beta 98.7 1.5E-06 5.3E-11 60.0 14.0 97 45-145 59-190 (347)
198 2z2n_A Virginiamycin B lyase; 98.7 1.3E-05 4.3E-10 54.0 18.2 114 43-158 55-173 (299)
199 3e5z_A Putative gluconolactona 98.6 4E-06 1.4E-10 56.8 14.6 113 42-159 169-290 (296)
200 2xdw_A Prolyl endopeptidase; a 98.6 5.9E-06 2E-10 62.8 16.9 110 47-157 173-322 (710)
201 3nol_A Glutamine cyclotransfer 98.6 9.6E-06 3.3E-10 54.2 15.2 127 35-164 32-164 (262)
202 3mbr_X Glutamine cyclotransfer 98.6 2.5E-05 8.5E-10 51.7 16.7 117 46-164 22-142 (243)
203 2mad_H Methylamine dehydrogena 98.6 3.7E-06 1.3E-10 59.3 13.6 109 53-164 31-166 (373)
204 2z2n_A Virginiamycin B lyase; 98.5 3.2E-05 1.1E-09 52.0 17.6 111 43-157 181-297 (299)
205 3q7m_A Lipoprotein YFGL, BAMB; 98.5 3.3E-06 1.1E-10 59.2 12.6 110 53-164 52-171 (376)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 98.5 3.2E-05 1.1E-09 52.5 16.4 110 46-155 173-299 (314)
207 2qc5_A Streptogramin B lactona 98.5 7.7E-05 2.6E-09 50.1 18.2 113 43-158 60-178 (300)
208 3c5m_A Oligogalacturonate lyas 98.5 3.3E-05 1.1E-09 54.0 16.6 114 42-158 185-332 (396)
209 3c75_H MADH, methylamine dehyd 98.5 1.8E-06 6E-11 61.9 10.1 111 53-165 83-219 (426)
210 3nok_A Glutaminyl cyclase; bet 98.4 6E-05 2.1E-09 50.4 16.3 115 48-165 99-220 (268)
211 2mad_H Methylamine dehydrogena 98.4 0.00012 4.2E-09 51.6 19.0 108 49-159 70-199 (373)
212 3c5m_A Oligogalacturonate lyas 98.4 4.5E-07 1.5E-11 63.6 6.6 114 47-160 38-182 (396)
213 1yiq_A Quinohemoprotein alcoho 98.4 5.1E-06 1.7E-10 63.1 12.1 61 105-165 454-515 (689)
214 1kb0_A Quinohemoprotein alcoho 98.4 3.5E-06 1.2E-10 63.9 11.2 110 55-165 328-517 (677)
215 1pjx_A Dfpase, DIISOPROPYLFLUO 98.4 3.7E-05 1.3E-09 52.2 15.3 118 45-164 117-265 (314)
216 1yr2_A Prolyl oligopeptidase; 98.4 5E-06 1.7E-10 63.6 11.7 112 43-156 161-304 (741)
217 2iwa_A Glutamine cyclotransfer 98.4 6.6E-05 2.3E-09 50.4 15.7 116 48-165 69-191 (266)
218 3hxj_A Pyrrolo-quinoline quino 98.4 1.1E-05 3.7E-10 55.2 12.3 112 46-163 138-251 (330)
219 3sjl_D Methylamine dehydrogena 98.4 7.1E-05 2.4E-09 53.0 16.3 108 50-158 83-212 (386)
220 3nol_A Glutamine cyclotransfer 98.4 8.3E-05 2.8E-09 49.7 15.7 115 48-165 90-211 (262)
221 2iwa_A Glutamine cyclotransfer 98.4 0.00017 5.7E-09 48.5 17.4 117 47-164 23-144 (266)
222 2qc5_A Streptogramin B lactona 98.3 0.00018 6.2E-09 48.3 18.2 111 44-157 103-219 (300)
223 3hrp_A Uncharacterized protein 98.3 2.1E-05 7.1E-10 56.2 12.2 111 45-157 131-251 (409)
224 3mbr_X Glutamine cyclotransfer 98.3 0.00023 7.8E-09 47.1 18.1 115 48-165 68-189 (243)
225 3g4e_A Regucalcin; six bladed 98.3 0.00012 4.1E-09 49.7 15.4 121 45-165 98-239 (297)
226 1yr2_A Prolyl oligopeptidase; 98.3 0.0002 6.7E-09 54.9 17.6 120 43-163 266-402 (741)
227 3g4e_A Regucalcin; six bladed 98.2 0.00011 3.9E-09 49.8 13.8 91 45-135 149-249 (297)
228 1kb0_A Quinohemoprotein alcoho 98.2 0.00015 5.1E-09 55.1 15.6 112 53-164 173-355 (677)
229 3c75_H MADH, methylamine dehyd 98.2 0.00028 9.6E-09 50.6 16.2 108 49-158 122-251 (426)
230 3dr2_A Exported gluconolactona 98.2 0.00053 1.8E-08 46.7 16.4 137 8-156 58-225 (305)
231 3hxj_A Pyrrolo-quinoline quino 98.1 7E-05 2.4E-09 51.2 11.5 114 45-164 177-292 (330)
232 2qe8_A Uncharacterized protein 98.1 0.00022 7.5E-09 49.5 14.0 115 45-160 17-159 (343)
233 1kv9_A Type II quinohemoprotei 98.1 0.00055 1.9E-08 51.9 16.9 61 105-165 437-498 (668)
234 2ghs_A AGR_C_1268P; regucalcin 98.1 0.00083 2.8E-08 46.3 16.6 108 44-156 89-213 (326)
235 3hrp_A Uncharacterized protein 98.1 0.00031 1.1E-08 50.1 14.4 104 50-154 176-297 (409)
236 2ad6_A Methanol dehydrogenase 98.0 7.2E-05 2.5E-09 55.7 11.0 61 104-165 442-504 (571)
237 1mda_H Methylamine dehydrogena 98.0 2.6E-05 9E-10 54.9 8.2 89 65-155 47-158 (368)
238 1yiq_A Quinohemoprotein alcoho 98.0 0.00049 1.7E-08 52.4 15.5 110 54-163 167-346 (689)
239 2ece_A 462AA long hypothetical 98.0 0.0015 5.2E-08 47.1 17.0 147 4-155 93-289 (462)
240 3iuj_A Prolyl endopeptidase; h 98.0 6.8E-05 2.3E-09 57.0 10.9 114 42-157 126-270 (693)
241 1flg_A Protein (quinoprotein e 98.0 8.2E-05 2.8E-09 55.5 11.0 60 105-165 465-526 (582)
242 1w6s_A Methanol dehydrogenase 98.0 0.00015 5E-09 54.3 11.6 61 104-165 451-513 (599)
243 3iuj_A Prolyl endopeptidase; h 97.9 0.001 3.4E-08 50.7 16.0 110 49-158 179-317 (693)
244 2ece_A 462AA long hypothetical 97.9 0.00015 5E-09 52.2 10.3 110 54-164 95-246 (462)
245 2ghs_A AGR_C_1268P; regucalcin 97.9 0.0021 7.1E-08 44.2 15.9 98 46-144 180-291 (326)
246 1kv9_A Type II quinohemoprotei 97.8 0.0012 4.2E-08 50.1 14.6 111 53-163 161-341 (668)
247 1w6s_A Methanol dehydrogenase 97.8 0.0004 1.4E-08 52.1 11.0 112 53-164 61-200 (599)
248 2qe8_A Uncharacterized protein 97.7 0.0023 7.8E-08 44.4 14.0 111 42-152 64-223 (343)
249 3dr2_A Exported gluconolactona 97.7 0.0022 7.5E-08 43.6 13.3 116 39-158 39-181 (305)
250 2ad6_A Methanol dehydrogenase 97.5 0.00082 2.8E-08 50.1 9.6 110 53-164 61-194 (571)
251 1mda_H Methylamine dehydrogena 97.4 0.0011 3.9E-08 46.6 9.0 75 90-165 269-356 (368)
252 2be1_A Serine/threonine-protei 97.4 0.00038 1.3E-08 48.4 6.4 111 54-164 10-139 (339)
253 1npe_A Nidogen, entactin; glyc 97.1 0.026 9E-07 37.4 20.2 117 46-164 123-247 (267)
254 1flg_A Protein (quinoprotein e 97.0 0.0081 2.8E-07 44.9 10.2 109 53-163 67-201 (582)
255 4a2l_A BT_4663, two-component 97.0 0.075 2.6E-06 41.1 17.8 113 44-157 356-482 (795)
256 3pbp_A Nucleoporin NUP82; beta 96.9 0.072 2.5E-06 38.3 13.5 101 53-155 31-158 (452)
257 1k3i_A Galactose oxidase precu 96.6 0.035 1.2E-06 42.0 10.8 105 53-157 197-325 (656)
258 1fwx_A Nitrous oxide reductase 96.5 0.017 5.9E-07 43.1 8.4 89 65-155 255-361 (595)
259 3v9f_A Two-component system se 96.5 0.2 6.8E-06 38.7 16.9 112 44-157 406-526 (781)
260 1fwx_A Nitrous oxide reductase 96.4 0.2 6.8E-06 37.6 14.8 109 46-156 135-309 (595)
261 3qqz_A Putative uncharacterize 96.3 0.12 4.2E-06 34.4 14.2 114 39-153 21-149 (255)
262 4a2l_A BT_4663, two-component 96.3 0.28 9.7E-06 37.9 18.8 111 44-156 214-340 (795)
263 2xn4_A Kelch-like protein 2; s 96.2 0.15 5E-06 34.4 11.5 104 52-157 154-278 (302)
264 3v9f_A Two-component system se 96.1 0.35 1.2E-05 37.3 15.2 112 45-158 363-481 (781)
265 1npe_A Nidogen, entactin; glyc 95.8 0.22 7.5E-06 32.9 19.7 112 45-157 79-200 (267)
266 2xn4_A Kelch-like protein 2; s 95.8 0.24 8.2E-06 33.3 11.1 104 52-157 107-231 (302)
267 3amr_A 3-phytase; beta-propell 95.7 0.32 1.1E-05 34.1 14.6 108 56-164 145-273 (355)
268 2xe4_A Oligopeptidase B; hydro 95.5 0.61 2.1E-05 36.0 15.1 107 49-155 225-354 (751)
269 2vpj_A Kelch-like protein 12; 95.4 0.35 1.2E-05 32.5 12.8 105 52-158 158-281 (301)
270 3v65_B Low-density lipoprotein 95.3 0.47 1.6E-05 33.5 18.7 119 45-163 202-326 (386)
271 3ii7_A Kelch-like protein 7; p 95.1 0.45 1.5E-05 32.1 11.9 105 51-157 53-180 (306)
272 3pbp_A Nucleoporin NUP82; beta 94.9 0.7 2.4E-05 33.4 15.3 106 46-153 67-210 (452)
273 2xe4_A Oligopeptidase B; hydro 94.9 0.24 8.4E-06 38.2 9.5 109 46-156 175-305 (751)
274 2fp8_A Strictosidine synthase; 94.8 0.57 1.9E-05 31.8 14.0 109 46-155 81-216 (322)
275 2fp8_A Strictosidine synthase; 94.8 0.58 2E-05 31.8 11.9 106 48-155 188-313 (322)
276 1zgk_A Kelch-like ECH-associat 94.7 0.61 2.1E-05 31.5 12.0 104 52-157 120-242 (308)
277 1n7d_A LDL receptor, low-densi 94.6 0.28 9.5E-06 37.6 9.1 115 48-163 499-622 (699)
278 2vpj_A Kelch-like protein 12; 94.6 0.63 2.2E-05 31.2 13.4 104 52-157 61-186 (301)
279 1tl2_A L10, protein (tachylect 94.4 0.61 2.1E-05 30.6 8.9 100 45-150 41-158 (236)
280 2xbg_A YCF48-like protein; pho 94.3 0.81 2.8E-05 31.4 14.1 108 44-153 204-320 (327)
281 3v64_C Agrin; beta propeller, 94.3 0.86 2.9E-05 31.6 17.7 107 48-155 119-234 (349)
282 3tc9_A Hypothetical hydrolase; 94.2 1.1 3.6E-05 32.2 16.1 109 44-154 178-300 (430)
283 3v64_C Agrin; beta propeller, 93.9 1 3.6E-05 31.2 20.0 119 45-163 159-283 (349)
284 3v65_B Low-density lipoprotein 93.7 1.2 4.2E-05 31.3 16.4 110 45-154 116-233 (386)
285 1zgk_A Kelch-like ECH-associat 93.5 1.1 3.8E-05 30.2 12.5 105 52-158 167-290 (308)
286 3sov_A LRP-6, low-density lipo 93.5 1.2 4.1E-05 30.5 20.0 118 45-163 122-246 (318)
287 4asc_A Kelch repeat and BTB do 93.3 1.2 4.2E-05 30.1 12.2 105 52-158 147-280 (315)
288 3f7f_A Nucleoporin NUP120; nuc 93.1 0.19 6.3E-06 38.6 5.5 37 128-164 223-259 (729)
289 3ii7_A Kelch-like protein 7; p 93.1 1.3 4.4E-05 29.7 13.4 105 51-157 99-227 (306)
290 1n7d_A LDL receptor, low-densi 93.1 0.64 2.2E-05 35.7 8.5 102 53-155 464-571 (699)
291 2p9w_A MAL S 1 allergenic prot 92.6 1.8 6.2E-05 30.1 15.7 93 63-156 99-216 (334)
292 2p4o_A Hypothetical protein; p 92.3 1.7 5.9E-05 29.2 12.4 71 86-158 33-107 (306)
293 2p9w_A MAL S 1 allergenic prot 92.3 2 6.8E-05 29.9 13.6 109 45-153 13-166 (334)
294 3m0c_C LDL receptor, low-densi 92.2 3.4 0.00011 32.4 20.0 109 47-155 473-589 (791)
295 3ei3_A DNA damage-binding prot 92.2 4.1 0.00014 33.4 17.4 108 45-153 514-634 (1158)
296 3tc9_A Hypothetical hydrolase; 92.2 2.4 8.1E-05 30.4 11.9 107 48-157 140-259 (430)
297 4gq2_M Nucleoporin NUP120; bet 91.8 3.2 0.00011 33.2 11.1 37 86-122 237-273 (950)
298 2woz_A Kelch repeat and BTB do 91.7 2.1 7.2E-05 28.9 10.1 105 52-158 157-290 (318)
299 4gq2_M Nucleoporin NUP120; bet 91.6 4.4 0.00015 32.4 12.0 37 128-164 237-275 (950)
300 3p5b_L Low density lipoprotein 91.2 2.9 0.0001 29.6 19.1 111 44-154 111-233 (400)
301 3qqz_A Putative uncharacterize 90.9 2.4 8.3E-05 28.2 18.4 110 43-153 119-251 (255)
302 1k3i_A Galactose oxidase precu 90.9 4.1 0.00014 30.8 14.9 65 53-118 253-326 (656)
303 2xzh_A Clathrin heavy chain 1; 90.8 3.1 0.00011 29.2 14.2 121 38-158 193-335 (365)
304 1ijq_A LDL receptor, low-densi 90.7 2.8 9.6E-05 28.5 19.4 108 47-155 79-195 (316)
305 2p4o_A Hypothetical protein; p 90.4 2.9 9.8E-05 28.1 16.8 110 45-156 32-148 (306)
306 3f7f_A Nucleoporin NUP120; nuc 90.3 1 3.4E-05 34.7 6.8 72 8-80 173-257 (729)
307 3ei3_A DNA damage-binding prot 90.2 6.8 0.00023 32.2 13.8 109 43-155 884-999 (1158)
308 4hw6_A Hypothetical protein, I 89.7 4.3 0.00015 29.1 12.0 110 47-158 141-262 (433)
309 2be1_A Serine/threonine-protei 88.9 1.8 6.3E-05 30.1 6.8 67 97-163 11-84 (339)
310 4fhn_B Nucleoporin NUP120; pro 88.5 3.5 0.00012 33.6 9.1 36 87-122 240-275 (1139)
311 2woz_A Kelch repeat and BTB do 88.4 4.3 0.00015 27.4 10.8 104 52-157 108-233 (318)
312 4fhn_B Nucleoporin NUP120; pro 88.1 2.7 9.2E-05 34.3 8.2 28 137-164 250-277 (1139)
313 2xbg_A YCF48-like protein; pho 88.1 4.7 0.00016 27.5 17.6 104 45-152 122-231 (327)
314 3p5b_L Low density lipoprotein 88.0 5.5 0.00019 28.2 20.4 110 46-155 160-277 (400)
315 4hw6_A Hypothetical protein, I 87.4 6.3 0.00022 28.3 15.0 69 86-154 229-303 (433)
316 1bpo_A Protein (clathrin); cla 87.3 7 0.00024 28.6 15.8 121 38-158 192-334 (494)
317 3m0c_C LDL receptor, low-densi 87.2 9.3 0.00032 30.0 20.9 118 45-162 514-639 (791)
318 1ijq_A LDL receptor, low-densi 87.0 5.4 0.00019 27.1 20.4 117 45-163 120-246 (316)
319 2uvk_A YJHT; unknown function, 86.8 5.8 0.0002 27.2 13.5 58 107-164 286-351 (357)
320 3sov_A LRP-6, low-density lipo 85.7 6.6 0.00023 26.8 18.0 107 47-154 81-196 (318)
321 2xzh_A Clathrin heavy chain 1; 85.1 8 0.00027 27.2 14.1 94 64-163 49-144 (365)
322 4asc_A Kelch repeat and BTB do 84.7 7 0.00024 26.3 13.9 103 53-157 45-176 (315)
323 3sbq_A Nitrous-oxide reductase 83.1 5.6 0.00019 30.1 7.0 69 87-156 325-409 (638)
324 3ott_A Two-component system se 82.8 14 0.00049 28.4 14.0 110 45-157 146-262 (758)
325 1tl2_A L10, protein (tachylect 81.9 2.3 7.8E-05 27.9 4.2 64 86-153 42-114 (236)
326 3sre_A PON1, serum paraoxonase 79.8 13 0.00045 26.0 17.4 107 46-155 113-252 (355)
327 1bpo_A Protein (clathrin); cla 79.5 16 0.00055 26.8 12.7 95 63-163 47-143 (494)
328 3amr_A 3-phytase; beta-propell 78.8 14 0.00049 25.9 15.1 114 8-123 145-272 (355)
329 3das_A Putative oxidoreductase 78.5 15 0.0005 25.7 10.0 71 85-155 32-116 (347)
330 3qhy_B Beta-lactamase inhibito 75.6 15 0.00053 24.5 13.3 104 45-154 63-167 (282)
331 1xi4_A Clathrin heavy chain; a 73.2 44 0.0015 28.7 9.9 94 64-157 226-333 (1630)
332 2zwa_A Leucine carboxyl methyl 73.0 30 0.001 26.6 13.5 111 48-158 494-638 (695)
333 3a9g_A Putative uncharacterize 71.9 22 0.00075 24.7 8.7 69 85-155 29-114 (354)
334 3qhy_B Beta-lactamase inhibito 71.7 20 0.00068 24.0 14.9 106 45-155 102-207 (282)
335 3s94_A LRP-6, low-density lipo 71.6 30 0.001 26.2 16.4 116 47-162 129-250 (619)
336 3kya_A Putative phosphatase; s 71.2 29 0.00098 25.7 10.7 107 47-154 141-277 (496)
337 2uvk_A YJHT; unknown function, 70.8 22 0.00076 24.2 14.7 52 52-105 64-128 (357)
338 4a0p_A LRP6, LRP-6, low-densit 70.3 33 0.0011 26.0 18.4 110 45-154 37-154 (628)
339 3ott_A Two-component system se 70.1 35 0.0012 26.3 14.5 110 44-157 21-132 (758)
340 1xi4_A Clathrin heavy chain; a 68.9 36 0.0012 29.2 8.6 87 63-155 47-134 (1630)
341 2ism_A Putative oxidoreductase 68.7 26 0.00089 24.2 10.2 68 85-155 31-114 (352)
342 1cru_A Protein (soluble quinop 64.8 37 0.0013 24.6 9.4 51 86-136 28-86 (454)
343 4a0p_A LRP6, LRP-6, low-densit 63.1 47 0.0016 25.2 20.0 116 46-163 124-245 (628)
344 3kya_A Putative phosphatase; s 62.8 44 0.0015 24.7 14.3 68 86-153 248-339 (496)
345 2zwa_A Leucine carboxyl methyl 58.0 62 0.0021 24.9 13.3 109 48-157 444-579 (695)
346 3s94_A LRP-6, low-density lipo 56.8 62 0.0021 24.5 18.1 107 46-153 350-465 (619)
347 3kci_A Probable E3 ubiquitin-p 54.6 52 0.0018 23.0 16.8 109 46-154 54-186 (389)
348 2ism_A Putative oxidoreductase 49.5 61 0.0021 22.3 13.6 98 45-143 31-152 (352)
349 3uc1_A DNA gyrase subunit A; D 46.9 68 0.0023 22.1 16.3 108 45-154 95-227 (327)
350 3sre_A PON1, serum paraoxonase 45.5 75 0.0026 22.2 11.1 57 85-142 221-283 (355)
351 3al9_A Plexin-A2; beta-propell 42.1 1.1E+02 0.0036 23.0 6.8 65 46-110 401-476 (539)
352 1q47_A Semaphorin 3A; beta pro 38.3 1.2E+02 0.0041 22.4 6.8 65 46-110 405-487 (495)
353 3a9g_A Putative uncharacterize 32.8 1.2E+02 0.0042 20.9 12.9 70 44-115 28-114 (354)
354 3kci_A Probable E3 ubiquitin-p 32.2 1.3E+02 0.0044 21.0 17.6 109 46-154 160-292 (389)
355 1cru_A Protein (soluble quinop 29.9 1.6E+02 0.0054 21.3 12.8 51 45-95 27-87 (454)
356 2z5e_A Proteasome assembling c 29.7 61 0.0021 18.8 3.1 30 122-151 16-45 (122)
357 1uhe_A Aspartate 1-decarboxyla 28.7 40 0.0014 18.7 2.1 18 147-164 18-35 (97)
358 1vc3_B L-aspartate-alpha-decar 27.6 43 0.0015 18.5 2.1 19 146-164 18-36 (96)
359 4gz8_A Semaphorin-3A; multi-do 26.4 2.3E+02 0.0078 22.0 6.6 55 56-110 431-495 (667)
360 3plx_B Aspartate 1-decarboxyla 26.2 47 0.0016 18.6 2.1 18 147-164 19-36 (102)
361 3of7_A Regulator of chromosome 25.4 1.9E+02 0.0066 20.8 13.8 109 44-154 66-231 (473)
362 3oug_A Aspartate 1-decarboxyla 25.3 57 0.0019 18.7 2.3 19 146-164 45-63 (114)
363 3mwp_A Nucleoprotein; structur 25.0 21 0.00071 25.9 0.7 17 142-158 163-179 (577)
364 3nvq_A Semaphorin-7A; beta-pro 24.4 2.4E+02 0.0081 21.5 6.6 57 55-111 381-445 (590)
365 1ukf_A Avirulence protein AVRP 23.5 1.5E+02 0.005 18.8 4.4 30 128-157 120-152 (188)
366 2g8s_A Glucose/sorbosone dehyd 22.7 1.9E+02 0.0065 19.8 13.1 56 46-101 19-86 (353)
367 4gz8_A Semaphorin-3A; multi-do 22.4 2.7E+02 0.0094 21.6 7.7 27 42-68 467-495 (667)
368 1pqh_A Aspartate 1-decarboxyla 21.9 69 0.0024 19.2 2.3 20 146-165 59-78 (143)
369 3das_A Putative oxidoreductase 21.8 2.1E+02 0.0071 19.9 13.1 76 39-114 26-115 (347)
370 3sbq_A Nitrous-oxide reductase 20.8 2.9E+02 0.01 21.3 7.9 62 53-115 333-408 (638)
371 3no0_A DNA gyrase subunit A; D 20.8 1.9E+02 0.0066 19.2 17.8 107 46-154 117-245 (276)
No 1
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=9.2e-29 Score=169.97 Aligned_cols=152 Identities=17% Similarity=0.223 Sum_probs=135.2
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH 81 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~ 81 (166)
++.+..+++|+.|+.+++|+..... ....+..|..+|.+++| ++++|++|+.|+.|++||+.+++.+..+.
T Consensus 22 sp~~~~l~s~~~dg~v~lWd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~ 94 (304)
T 2ynn_A 22 HPTEPWVLTTLYSGRVELWNYETQV-------EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE 94 (304)
T ss_dssp CSSSSEEEEEETTSEEEEEETTTTE-------EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCc-------eeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEEEe
Confidence 4567789999999999999986533 34466789999999999 88999999999999999999999999999
Q ss_pred CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC-eeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCccc
Q psy16373 82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG-ACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~ 157 (166)
+|...|.+++|+|++.++++++.|++|++||++++ .....+.+|...|.+++|+| ..+++++.|+.|++||++++.
T Consensus 95 ~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~ 174 (304)
T 2ynn_A 95 AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (304)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSS
T ss_pred CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCC
Confidence 99999999999999999999999999999999987 55667889999999999998 389999999999999998877
Q ss_pred ceeee
Q psy16373 158 LLSTI 162 (166)
Q Consensus 158 ~~~~~ 162 (166)
+...+
T Consensus 175 ~~~~~ 179 (304)
T 2ynn_A 175 PNFTL 179 (304)
T ss_dssp CSEEE
T ss_pred cccee
Confidence 65544
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.97 E-value=3.2e-28 Score=168.60 Aligned_cols=153 Identities=20% Similarity=0.280 Sum_probs=138.4
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH 81 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~ 81 (166)
++.+..+++|+.++.+.+|+..... ....+..|...|.+++| ++++|++|+.|+.|++||+++++.+..+.
T Consensus 131 spdg~~l~~g~~dg~v~i~~~~~~~-------~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~ 203 (321)
T 3ow8_A 131 SPDSQYLATGTHVGKVNIFGVESGK-------KEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLE 203 (321)
T ss_dssp CTTSSEEEEECTTSEEEEEETTTCS-------EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred CCCCCEEEEEcCCCcEEEEEcCCCc-------eeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc
Confidence 3456789999999999999986543 23356678889999999 88999999999999999999999999999
Q ss_pred CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373 82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL 159 (166)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~ 159 (166)
+|..+|.+++|+|++.++++++.|+.|++||+++++.+..+.+|...|.+++|+| .+|++++.|+.|++||+++++++
T Consensus 204 ~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~ 283 (321)
T 3ow8_A 204 GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCV 283 (321)
T ss_dssp CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEE
Confidence 9999999999999999999999999999999999999999999999999999998 48999999999999999999988
Q ss_pred eeee
Q psy16373 160 STIQ 163 (166)
Q Consensus 160 ~~~~ 163 (166)
.++.
T Consensus 284 ~~~~ 287 (321)
T 3ow8_A 284 HTFF 287 (321)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 7764
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=2.2e-28 Score=174.43 Aligned_cols=152 Identities=15% Similarity=0.252 Sum_probs=138.2
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG 82 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~ 82 (166)
+....+++|+.|+.+++|+..... ....+.+|...|.+++| ++++|++|+.|+.|++||+.+++.+..+.+
T Consensus 118 p~~~~l~s~s~Dg~i~vwd~~~~~-------~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~ 190 (410)
T 1vyh_C 118 PVFSVMVSASEDATIKVWDYETGD-------FERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHG 190 (410)
T ss_dssp SSSSEEEEEESSSCEEEEETTTCC-------CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCC
T ss_pred CCCCEEEEEeCCCeEEEEECCCCc-------EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcC
Confidence 345689999999999999976543 33467899999999999 788999999999999999999999999999
Q ss_pred CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccccee
Q psy16373 83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLS 160 (166)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~ 160 (166)
|...|.+++|+|++..+++++.|++|++||++++.++..+.+|...|.++.|++ ..+++++.|+.|++||+++++...
T Consensus 191 h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~ 270 (410)
T 1vyh_C 191 HDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKA 270 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceee
Confidence 999999999999999999999999999999999999999999999999999998 489999999999999999988776
Q ss_pred eee
Q psy16373 161 TIQ 163 (166)
Q Consensus 161 ~~~ 163 (166)
.+.
T Consensus 271 ~~~ 273 (410)
T 1vyh_C 271 ELR 273 (410)
T ss_dssp EEC
T ss_pred Eec
Confidence 654
No 4
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.96 E-value=1.1e-27 Score=167.34 Aligned_cols=154 Identities=15% Similarity=0.195 Sum_probs=129.7
Q ss_pred EEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCc
Q psy16373 9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGP 86 (166)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~ 86 (166)
.+++|+.|+.+++|+....+... .......+|...|.+++| ++++|++|+.|+.|++||+++++.+..+.+|...
T Consensus 95 ~l~~~s~dg~v~lWd~~~~~~~~---~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~ 171 (344)
T 4gqb_B 95 GILVASDSGAVELWELDENETLI---VSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQ 171 (344)
T ss_dssp EEEEEETTSEEEEEEECTTSSCE---EEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred eEEEEECCCEEEEEeccCCCcee---EeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCc
Confidence 57899999999999986554221 122345689999999999 8899999999999999999999999999999999
Q ss_pred eEEEEEcCCC-CEEEEecCCCcEEEEeCcCCeeeEEee--cccccEEEEEEcC---CeEEEeecCCcEEEEECCccccee
Q psy16373 87 ITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYSIQ--AHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGHLLS 160 (166)
Q Consensus 87 v~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~~~~~~~~--~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~~~~ 160 (166)
|.+++|+|++ ..+++++.|++|++||++++++...+. .+...+.+++|+| .++++++.|+.|++||+++++++.
T Consensus 172 V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~ 251 (344)
T 4gqb_B 172 VTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVL 251 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCE
T ss_pred eEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEE
Confidence 9999999986 578999999999999999998887764 3455789999997 378899999999999999999988
Q ss_pred eeeec
Q psy16373 161 TIQLQ 165 (166)
Q Consensus 161 ~~~~~ 165 (166)
++..+
T Consensus 252 ~~~~h 256 (344)
T 4gqb_B 252 SSAVH 256 (344)
T ss_dssp EEECC
T ss_pred EEcCC
Confidence 87643
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.96 E-value=1.5e-27 Score=166.27 Aligned_cols=157 Identities=18% Similarity=0.261 Sum_probs=138.4
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHG 82 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~ 82 (166)
++.+..+++|+.++.+++|+...... .......+.+|...|.++.| .++.+++++.|+.|++||+++++.+..+.+
T Consensus 106 s~~~~~l~s~~~d~~v~iw~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~ 182 (340)
T 1got_B 106 APSGNYVACGGLDNICSIYNLKTREG---NVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTG 182 (340)
T ss_dssp CTTSSEEEEEETTCEEEEEETTTCSB---SCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred CCCCCEEEEEeCCCeEEEEECccCCC---cceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcC
Confidence 34566889999999999999865431 12234467799999999999 777899999999999999999999999999
Q ss_pred CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccccee
Q psy16373 83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLS 160 (166)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~ 160 (166)
|...|.+++|+|++.++++++.|+.|++||++++.++..+.+|...|++++|+| +.+++++.|+.|++||+++++.+.
T Consensus 183 h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~ 262 (340)
T 1got_B 183 HTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred CCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 999999999999999999999999999999999999999999999999999998 599999999999999999887766
Q ss_pred eee
Q psy16373 161 TIQ 163 (166)
Q Consensus 161 ~~~ 163 (166)
.+.
T Consensus 263 ~~~ 265 (340)
T 1got_B 263 TYS 265 (340)
T ss_dssp EEC
T ss_pred EEc
Confidence 553
No 6
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.96 E-value=5.9e-28 Score=167.24 Aligned_cols=143 Identities=23% Similarity=0.371 Sum_probs=130.7
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH 81 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~ 81 (166)
++.+..+++|+.++.+++|+..... .+..+.+|..+|.+++| ++.+|++|+.|+.|++||+++++....+.
T Consensus 173 spdg~~lasg~~dg~i~iwd~~~~~-------~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 245 (321)
T 3ow8_A 173 SPDGKYLASGAIDGIINIFDIATGK-------LLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS 245 (321)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCc-------EEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc
Confidence 3456789999999999999976432 34567789999999999 78899999999999999999999999999
Q ss_pred CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEEC
Q psy16373 82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDR 153 (166)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~ 153 (166)
+|...|.+++|+|++.++++++.|+.|++||+++++++..+.+|...|.+++|+| ..|++++.|+.|++||.
T Consensus 246 ~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 246 GHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEEC
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeC
Confidence 9999999999999999999999999999999999999999999999999999998 48999999999999996
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.96 E-value=2.3e-27 Score=163.00 Aligned_cols=155 Identities=17% Similarity=0.228 Sum_probs=133.3
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTL 80 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~ 80 (166)
++.+..+++|+.|+.+++|+..... .....+.+|...|.+++| ++..|++|+.|+.|++||+.+......+
T Consensus 106 ~~~~~~l~sgs~D~~v~lWd~~~~~------~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~ 179 (304)
T 2ynn_A 106 HPTKPYVLSGSDDLTVKLWNWENNW------ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL 179 (304)
T ss_dssp CSSSSEEEEEETTSCEEEEEGGGTT------EEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEE
T ss_pred cCCCCEEEEECCCCeEEEEECCCCc------chhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcccee
Confidence 3456689999999999999986542 223456789999999999 3578999999999999999887666555
Q ss_pred c-CCCCceEEEEEcC--CCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373 81 H-GHCGPITTLFIDG--VSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQ 155 (166)
Q Consensus 81 ~-~~~~~v~~~~~~~--~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~ 155 (166)
. +|...+..++++| ++.++++++.|+.|++||+++++++..+.+|...|..++|+| ..|++++.|+.|++||+++
T Consensus 180 ~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~ 259 (304)
T 2ynn_A 180 TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (304)
T ss_dssp ECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred ccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 4 4667899999976 578999999999999999999999999999999999999999 4899999999999999999
Q ss_pred ccceeeeee
Q psy16373 156 GHLLSTIQL 164 (166)
Q Consensus 156 ~~~~~~~~~ 164 (166)
++.+.++..
T Consensus 260 ~~~~~~~~~ 268 (304)
T 2ynn_A 260 YKVEKTLNV 268 (304)
T ss_dssp CCEEEEECC
T ss_pred CceeeeccC
Confidence 998887754
No 8
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.96 E-value=3.9e-27 Score=162.87 Aligned_cols=154 Identities=20% Similarity=0.274 Sum_probs=135.1
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC 84 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~ 84 (166)
+.++++|+.|+.+++|+...... ....+...+.+|...|.+++| ++.+|++|+.|+.|++||+++++.+..+.+|.
T Consensus 30 ~~~l~s~s~D~~v~~W~~~~~~~--~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~ 107 (319)
T 3frx_A 30 PNLLLSASRDKTLISWKLTGDDQ--KFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHK 107 (319)
T ss_dssp TTEEEEEETTSEEEEEEEEEETT--EEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred ccEEEEecCCccEEEecCCCCCc--cccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCC
Confidence 36899999999999999864432 112355678899999999999 88999999999999999999999999999999
Q ss_pred CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--------eEEEeecCCcEEEEECCcc
Q psy16373 85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--------YVISLGQDERLCVWDRFQG 156 (166)
Q Consensus 85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--------~l~~~~~d~~i~~wd~~~~ 156 (166)
..|.+++|+|++.++++++.|++|++||++ +..+..+.+|...|.++.|.|. .+++++.|+.|++||++++
T Consensus 108 ~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~ 186 (319)
T 3frx_A 108 SDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF 186 (319)
T ss_dssp SCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTT
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc
Confidence 999999999999999999999999999996 5667788899999999999873 7999999999999999988
Q ss_pred cceeeee
Q psy16373 157 HLLSTIQ 163 (166)
Q Consensus 157 ~~~~~~~ 163 (166)
+....+.
T Consensus 187 ~~~~~~~ 193 (319)
T 3frx_A 187 QIEADFI 193 (319)
T ss_dssp EEEEEEC
T ss_pred hhheeec
Confidence 7665553
No 9
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=4.7e-27 Score=161.63 Aligned_cols=152 Identities=26% Similarity=0.375 Sum_probs=136.8
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH 81 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~ 81 (166)
++.+..+++|+.|+.+++|+..... ....+.+|...|.+++| ++++|++++.|+.|++||+++++.+..+.
T Consensus 32 s~~~~~l~s~~~dg~i~iw~~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 104 (312)
T 4ery_A 32 SPNGEWLASSSADKLIKIWGAYDGK-------FEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLK 104 (312)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCC-------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCCCEEEEeeCCCeEEEEeCCCcc-------cchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEc
Confidence 3456689999999999999875432 23456789999999999 78899999999999999999999999999
Q ss_pred CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373 82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL 159 (166)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~ 159 (166)
+|...|.+++|+|++.++++++.|+.+++||+++++.+..+..|..+|.+++|+| ..+++++.|+.|++||+++++.+
T Consensus 105 ~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~ 184 (312)
T 4ery_A 105 GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCL 184 (312)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcee
Confidence 9999999999999999999999999999999999999999999999999999998 48999999999999999998877
Q ss_pred eee
Q psy16373 160 STI 162 (166)
Q Consensus 160 ~~~ 162 (166)
..+
T Consensus 185 ~~~ 187 (312)
T 4ery_A 185 KTL 187 (312)
T ss_dssp EEE
T ss_pred eEE
Confidence 655
No 10
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.4e-27 Score=164.64 Aligned_cols=153 Identities=15% Similarity=0.274 Sum_probs=123.3
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc----cce
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ----QLL 77 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~----~~~ 77 (166)
++.+..+++|+.|+.+++|+................+.+|..+|.+++| ++++|++|+.|+.|++||+... +.+
T Consensus 67 sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~ 146 (330)
T 2hes_X 67 RPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECI 146 (330)
T ss_dssp CTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEE
T ss_pred CCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEE
Confidence 3456789999999999999875432111222345567899999999999 7889999999999999999532 456
Q ss_pred ehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC--eeeEEeecccccEEEEEEcCC----eEEEeecCCcEEEE
Q psy16373 78 FTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG--ACMYSIQAHDGCIHALTYSDS----YVISLGQDERLCVW 151 (166)
Q Consensus 78 ~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~--~~~~~~~~~~~~v~~i~~~~~----~l~~~~~d~~i~~w 151 (166)
..+.+|...|.+++|+|++.++++++.|++|++||.+++ +++..+.+|...|.+++|+|+ .+++++.|+.|++|
T Consensus 147 ~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw 226 (330)
T 2hes_X 147 SVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVW 226 (330)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEE
T ss_pred EEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEE
Confidence 678889999999999999999999999999999999876 678889999999999999984 68999999999999
Q ss_pred ECCcc
Q psy16373 152 DRFQG 156 (166)
Q Consensus 152 d~~~~ 156 (166)
|++++
T Consensus 227 ~~~~~ 231 (330)
T 2hes_X 227 KYMGD 231 (330)
T ss_dssp EEEEE
T ss_pred EecCC
Confidence 98765
No 11
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.96 E-value=1.9e-27 Score=166.20 Aligned_cols=150 Identities=19% Similarity=0.252 Sum_probs=127.1
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cC-cEEEEEecCCeEEEEEcccccceehh
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VS-NRVITGSQDHTLKVYKLEDQQLLFTL 80 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~-~~l~~~~~d~~v~v~~~~~~~~~~~~ 80 (166)
+..+.+|++|+.|+.+++|+.... ..+..+.+|...|.+++| ++ .+|++++.|+.|++||+++++....+
T Consensus 136 spdg~~l~sgs~d~~i~iwd~~~~-------~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~ 208 (344)
T 4gqb_B 136 LSSGTQAVSGSKDICIKVWDLAQQ-------VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQI 208 (344)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTT-------EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEEC
T ss_pred CCCCCEEEEEeCCCeEEEEECCCC-------cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeee
Confidence 445778999999999999998643 245577899999999999 34 57899999999999999999887766
Q ss_pred c--CCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC---eEEEeecCCcEEEEECC
Q psy16373 81 H--GHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS---YVISLGQDERLCVWDRF 154 (166)
Q Consensus 81 ~--~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~---~l~~~~~d~~i~~wd~~ 154 (166)
. .+...+.+++|+|+ +.++++|+.|+.|++||+++++++..+.+|...|++++|+|+ +|++++.|+.|++||++
T Consensus 209 ~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~ 288 (344)
T 4gqb_B 209 GCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSS 288 (344)
T ss_dssp C----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred ecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECC
Confidence 4 35567999999986 678899999999999999999999999999999999999983 68999999999999999
Q ss_pred ccccee
Q psy16373 155 QGHLLS 160 (166)
Q Consensus 155 ~~~~~~ 160 (166)
+++.+.
T Consensus 289 ~~~~~~ 294 (344)
T 4gqb_B 289 LSELFR 294 (344)
T ss_dssp CCEEEE
T ss_pred CCcEEE
Confidence 887653
No 12
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.96 E-value=1.2e-26 Score=162.59 Aligned_cols=158 Identities=18% Similarity=0.281 Sum_probs=136.5
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH 81 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~ 81 (166)
++.+..+++|+.|+.+.+|+......... ......+.+|...|.+++| ++..|++++.|++|++||+++++.+..+.
T Consensus 115 sp~g~~lasg~~d~~i~v~~~~~~~~~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~ 193 (354)
T 2pbi_B 115 APSGCAIACGGLDNKCSVYPLTFDKNENM-AAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFH 193 (354)
T ss_dssp CTTSSEEEEESTTSEEEEEECCCCTTCCS-GGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCCCEEEEeeCCCCEEEEEEeccccccc-cccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc
Confidence 34567899999999999998754322111 1234456789999999999 77799999999999999999999999999
Q ss_pred CCCCceEEEEEcCC--CCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373 82 GHCGPITTLFIDGV--SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 82 ~~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~ 157 (166)
+|...|.+++++|. +..+++|+.|+.+++||+++++++..+.+|...|++++|+| +.+++++.|+.|++||+++++
T Consensus 194 ~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~ 273 (354)
T 2pbi_B 194 GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADR 273 (354)
T ss_dssp CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCc
Confidence 99999999999874 68999999999999999999999999999999999999998 599999999999999999887
Q ss_pred ceeee
Q psy16373 158 LLSTI 162 (166)
Q Consensus 158 ~~~~~ 162 (166)
.+..+
T Consensus 274 ~~~~~ 278 (354)
T 2pbi_B 274 EVAIY 278 (354)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 65544
No 13
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=8.8e-27 Score=166.15 Aligned_cols=153 Identities=19% Similarity=0.334 Sum_probs=138.0
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG 82 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~ 82 (166)
+.+..+++|+.|+.+++|+..... ...++.+|...|.++.+ ++.+|++|+.|+.|++||+.+++....+.+
T Consensus 202 p~~~~l~s~s~D~~i~~wd~~~~~-------~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~ 274 (410)
T 1vyh_C 202 PNGDHIVSASRDKTIKMWEVQTGY-------CVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELRE 274 (410)
T ss_dssp SSSSEEEEEETTSEEEEEETTTCC-------EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred CCCCEEEEEeCCCeEEEEECCCCc-------EEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecC
Confidence 345689999999999999986543 34467799999999999 788999999999999999999999889999
Q ss_pred CCCceEEEEEcCC--------------------CCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEE
Q psy16373 83 HCGPITTLFIDGV--------------------SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVI 140 (166)
Q Consensus 83 ~~~~v~~~~~~~~--------------------~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~ 140 (166)
|...|.+++|+|+ +.++++|+.|+.|++||++++.++..+.+|...|.+++|+| .+|+
T Consensus 275 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~ 354 (410)
T 1vyh_C 275 HRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFIL 354 (410)
T ss_dssp CSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEE
T ss_pred CCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEE
Confidence 9999999999996 56899999999999999999999999999999999999998 4899
Q ss_pred EeecCCcEEEEECCcccceeeeee
Q psy16373 141 SLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 141 ~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
+++.|+.|++||+++++++.++..
T Consensus 355 s~s~D~~i~vwd~~~~~~~~~~~~ 378 (410)
T 1vyh_C 355 SCADDKTLRVWDYKNKRCMKTLNA 378 (410)
T ss_dssp EEETTTEEEEECCTTSCCCEEEEC
T ss_pred EEeCCCeEEEEECCCCceEEEEcC
Confidence 999999999999999998887764
No 14
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.96 E-value=2.4e-26 Score=158.98 Aligned_cols=153 Identities=20% Similarity=0.278 Sum_probs=134.7
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH 81 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~ 81 (166)
+..+.++++|+.|+.+++|+....+ ....+.+|..+|.+++| ++.+|++|+.|+.|++||++ ++.+..+.
T Consensus 74 s~dg~~l~s~s~D~~v~~wd~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~ 145 (319)
T 3frx_A 74 TADGAYALSASWDKTLRLWDVATGE-------TYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLL 145 (319)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTE-------EEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEEC
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCC-------eeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEe
Confidence 3456789999999999999986543 34467799999999999 78899999999999999997 55667788
Q ss_pred CCCCceEEEEEcCC------CCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEEC
Q psy16373 82 GHCGPITTLFIDGV------SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDR 153 (166)
Q Consensus 82 ~~~~~v~~~~~~~~------~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~ 153 (166)
+|...|.++.+.|. +..+++++.|+.|++||+++.+....+.+|...|.+++|+| .+|++++.|+.|++||+
T Consensus 146 ~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~ 225 (319)
T 3frx_A 146 GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNL 225 (319)
T ss_dssp CCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred ccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEC
Confidence 89999999999885 44899999999999999999999999999999999999998 48999999999999999
Q ss_pred Ccccceeeeee
Q psy16373 154 FQGHLLSTIQL 164 (166)
Q Consensus 154 ~~~~~~~~~~~ 164 (166)
++++.+.++..
T Consensus 226 ~~~~~~~~~~~ 236 (319)
T 3frx_A 226 AAKKAMYTLSA 236 (319)
T ss_dssp TTTEEEEEEEC
T ss_pred CCCcEEEEecC
Confidence 99988877654
No 15
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.95 E-value=4.5e-26 Score=158.92 Aligned_cols=155 Identities=20% Similarity=0.254 Sum_probs=129.0
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH 83 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~ 83 (166)
.+..|++|+.|+.+++|+....+...........+.+|..+|.+++| ++.++++++.|+.|++||+++++.+..+.+|
T Consensus 38 d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h 117 (343)
T 2xzm_R 38 DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGH 117 (343)
T ss_dssp CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECC
T ss_pred CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 56789999999999999986543322223445677899999999999 7889999999999999999999999999999
Q ss_pred CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee---cccccEEEEEEcCC------------eEEEeecCCcE
Q psy16373 84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ---AHDGCIHALTYSDS------------YVISLGQDERL 148 (166)
Q Consensus 84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~---~~~~~v~~i~~~~~------------~l~~~~~d~~i 148 (166)
...|.+++|+|++.++++++.|+.|++||+.... ..... .|...|.+++|+|+ ++++++.|+.|
T Consensus 118 ~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i 196 (343)
T 2xzm_R 118 QSEVYSVAFSPDNRQILSAGAEREIKLWNILGEC-KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRL 196 (343)
T ss_dssp CSCEEEEEECSSTTEEEEEETTSCEEEEESSSCE-EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEE
T ss_pred CCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCc-eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEE
Confidence 9999999999999999999999999999997443 33332 68889999999873 69999999999
Q ss_pred EEEECCcccceeee
Q psy16373 149 CVWDRFQGHLLSTI 162 (166)
Q Consensus 149 ~~wd~~~~~~~~~~ 162 (166)
++||. +.+....+
T Consensus 197 ~iwd~-~~~~~~~~ 209 (343)
T 2xzm_R 197 KVWNT-NFQIRYTF 209 (343)
T ss_dssp EEEET-TTEEEEEE
T ss_pred EEEcC-CCceeEEE
Confidence 99994 34444443
No 16
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=4.1e-26 Score=158.97 Aligned_cols=149 Identities=14% Similarity=0.195 Sum_probs=131.3
Q ss_pred EEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCc
Q psy16373 9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGP 86 (166)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~ 86 (166)
.+++++.|+.+++|+..... ....+.+|...|.+++| ++.++++|+.|+.|++||+++++....+.+|...
T Consensus 156 ~l~s~s~d~~i~~wd~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~ 228 (340)
T 1got_B 156 QIVTSSGDTTCALWDIETGQ-------QTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESD 228 (340)
T ss_dssp EEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSC
T ss_pred cEEEEECCCcEEEEECCCCc-------EEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCC
Confidence 47889999999999976543 34467789999999999 7889999999999999999999999999999999
Q ss_pred eEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec--ccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeee
Q psy16373 87 ITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA--HDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTI 162 (166)
Q Consensus 87 v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~--~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~ 162 (166)
|.+++|+|++.++++++.|+.|++||+++++.+..+.. +...|.+++|+| .++++++.|+.|++||+.+++.+..+
T Consensus 229 v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~ 308 (340)
T 1got_B 229 INAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVL 308 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEe
Confidence 99999999999999999999999999999988777653 234799999998 48999999999999999998887776
Q ss_pred ee
Q psy16373 163 QL 164 (166)
Q Consensus 163 ~~ 164 (166)
..
T Consensus 309 ~~ 310 (340)
T 1got_B 309 AG 310 (340)
T ss_dssp EC
T ss_pred ec
Confidence 53
No 17
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.95 E-value=2.9e-26 Score=157.02 Aligned_cols=149 Identities=14% Similarity=0.169 Sum_probs=126.4
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-c---CcEEEEEecCCeEEEEEccccc--ce
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-V---SNRVITGSQDHTLKVYKLEDQQ--LL 77 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~---~~~l~~~~~d~~v~v~~~~~~~--~~ 77 (166)
++.+..|++|+.|+.+++|+..... .....++.+|..+|.+++| . +++|++|+.|++|++||+++++ .+
T Consensus 18 s~~g~~las~s~D~~v~iw~~~~~~-----~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~ 92 (297)
T 2pm7_B 18 DYYGKRMATCSSDKTIKIFEVEGET-----HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQI 92 (297)
T ss_dssp CTTSSEEEEEETTSCEEEEEBCSSC-----BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCC
T ss_pred CCCCCEEEEEeCCCEEEEEecCCCC-----cEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEE
Confidence 4557789999999999999975321 1234577899999999999 2 6899999999999999998774 45
Q ss_pred ehhcCCCCceEEEEEcCC--CCEEEEecCCCcEEEEeCcCCe--eeEEeecccccEEEEEEcCC---------------e
Q psy16373 78 FTLHGHCGPITTLFIDGV--SMMSGSGSQDGLLCVWDTVTGA--CMYSIQAHDGCIHALTYSDS---------------Y 138 (166)
Q Consensus 78 ~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~v~~i~~~~~---------------~ 138 (166)
..+.+|...|.+++|+|+ +.++++++.|+.+++||++++. ....+.+|...|.+++|+|+ .
T Consensus 93 ~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~ 172 (297)
T 2pm7_B 93 AVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK 172 (297)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCE
T ss_pred EEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcce
Confidence 567789999999999997 8899999999999999998763 24567789999999999984 7
Q ss_pred EEEeecCCcEEEEECCccc
Q psy16373 139 VISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 139 l~~~~~d~~i~~wd~~~~~ 157 (166)
|++++.|+.|++||+++++
T Consensus 173 l~sgs~D~~v~lwd~~~~~ 191 (297)
T 2pm7_B 173 FVTGGADNLVKIWKYNSDA 191 (297)
T ss_dssp EEEEETTSCEEEEEEETTT
T ss_pred EEEEcCCCcEEEEEEcCCC
Confidence 9999999999999998766
No 18
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.4e-26 Score=158.31 Aligned_cols=150 Identities=17% Similarity=0.347 Sum_probs=119.6
Q ss_pred EEEecCCCceEEEeecccccceeeceeeeeee-ec-cCCceEEEEe--cCcEEEEEecCCeEEEEEccc-------ccce
Q psy16373 9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVEST-RA-HHQPITVLEC--VSNRVITGSQDHTLKVYKLED-------QQLL 77 (166)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~-------~~~~ 77 (166)
++++|+.|+.+++|+...... .....+ .+ |..+|.+++| ++++|++|+.|+.|++||+.. .+.+
T Consensus 26 ~las~~~D~~i~lw~~~~~~~-----~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~ 100 (330)
T 2hes_X 26 ILATGSTDRKIKLVSVKYDDF-----TLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLL 100 (330)
T ss_dssp EEEEEESSSCEEEEECSSSCC-----EEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEE
T ss_pred EEEEEcCCCEEEEEEecCCCe-----EEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeE
Confidence 899999999999999864321 122233 34 9999999999 788999999999999999953 3455
Q ss_pred ehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC----CeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEE
Q psy16373 78 FTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT----GACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVW 151 (166)
Q Consensus 78 ~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~----~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~w 151 (166)
..+.+|...|.+++|+|+++++++++.|++|++||++. .+++..+.+|...|.+++|+| .+|++++.|+.|++|
T Consensus 101 ~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW 180 (330)
T 2hes_X 101 AIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIW 180 (330)
T ss_dssp EEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEE
T ss_pred EEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEE
Confidence 67789999999999999999999999999999999953 256778889999999999998 489999999999999
Q ss_pred ECCcc--cceeeee
Q psy16373 152 DRFQG--HLLSTIQ 163 (166)
Q Consensus 152 d~~~~--~~~~~~~ 163 (166)
|.+++ +++..+.
T Consensus 181 ~~~~~~~~~~~~~~ 194 (330)
T 2hes_X 181 KDYDDDWECVAVLN 194 (330)
T ss_dssp EEETTEEEEEEEEC
T ss_pred ECCCCCeeEEEEcc
Confidence 98765 4444443
No 19
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.95 E-value=1.1e-25 Score=157.79 Aligned_cols=151 Identities=15% Similarity=0.188 Sum_probs=131.6
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe----cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC----VSNRVITGSQDHTLKVYKLEDQQLLFTLH 81 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~l~~~~~d~~v~v~~~~~~~~~~~~~ 81 (166)
....+++++.|+.+++|+..... ....+.+|...|.++++ ++++|++|+.|+.|++||+++++.+..+.
T Consensus 165 ~~~~l~t~s~D~~v~lwd~~~~~-------~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~ 237 (354)
T 2pbi_B 165 SDMQILTASGDGTCALWDVESGQ-------LLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFE 237 (354)
T ss_dssp SSSEEEEEETTSEEEEEETTTCC-------EEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CCCEEEEEeCCCcEEEEeCCCCe-------EEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEec
Confidence 34578999999999999986543 34567799999999998 35799999999999999999999999999
Q ss_pred CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecc--cccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373 82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAH--DGCIHALTYSD--SYVISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~--~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~ 157 (166)
+|...|.+++|+|++..+++++.|+++++||+++.+.+..+..+ ...+.+++|+| .++++++.|+.|++||+.+++
T Consensus 238 ~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 238 THESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGS 317 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCS
T ss_pred CCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCc
Confidence 99999999999999999999999999999999998877766543 34789999998 589999999999999999988
Q ss_pred ceeeee
Q psy16373 158 LLSTIQ 163 (166)
Q Consensus 158 ~~~~~~ 163 (166)
.+..+.
T Consensus 318 ~~~~l~ 323 (354)
T 2pbi_B 318 RVSILF 323 (354)
T ss_dssp EEEEEC
T ss_pred eEEEEE
Confidence 777654
No 20
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.95 E-value=4.5e-26 Score=159.13 Aligned_cols=151 Identities=14% Similarity=0.239 Sum_probs=127.6
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc--cceeh
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ--QLLFT 79 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~--~~~~~ 79 (166)
++.+.+|++|+.|+.+++|+....... .......+|...|.+++| ++++|++|+.|+.+++|++..+ +.+..
T Consensus 25 sp~g~~las~~~D~~i~iw~~~~~~~~----~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~ 100 (345)
T 3fm0_A 25 NPAGTLLASCGGDRRIRIWGTEGDSWI----CKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTT 100 (345)
T ss_dssp CTTSSCEEEEETTSCEEEEEEETTEEE----EEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEE
T ss_pred CCCCCEEEEEcCCCeEEEEEcCCCcce----eeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEE
Confidence 455678999999999999997543211 111223589999999999 7899999999999999999866 45678
Q ss_pred hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC---eeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECC
Q psy16373 80 LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG---ACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRF 154 (166)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~---~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~ 154 (166)
+.+|...|.+++|+|+++++++++.|+.|++||++++ ..+..+.+|...|.+++|+| .+|++++.|+.|++||.+
T Consensus 101 ~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~ 180 (345)
T 3fm0_A 101 LEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREE 180 (345)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEE
T ss_pred ccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEec
Confidence 8899999999999999999999999999999999866 34567788999999999998 589999999999999998
Q ss_pred cccc
Q psy16373 155 QGHL 158 (166)
Q Consensus 155 ~~~~ 158 (166)
+++.
T Consensus 181 ~~~~ 184 (345)
T 3fm0_A 181 EDDW 184 (345)
T ss_dssp TTEE
T ss_pred CCCE
Confidence 7653
No 21
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.95 E-value=2.3e-26 Score=162.51 Aligned_cols=147 Identities=19% Similarity=0.273 Sum_probs=126.9
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH 83 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~ 83 (166)
.+..+++|+.|+.+++|+..... .....+.+|...|.+++| ++.+|++|+.|+.|++||+++++.+..+..+
T Consensus 217 ~~~~l~sgs~D~~v~~wd~~~~~------~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~ 290 (380)
T 3iz6_a 217 NANMFISGSCDTTVRLWDLRITS------RAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNRE 290 (380)
T ss_dssp SCCEEEEEETTSCEEEEETTTTC------CCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCC
T ss_pred CCCEEEEEECCCeEEEEECCCCC------cceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEeccc
Confidence 46789999999999999986432 234467799999999999 7889999999999999999998877666543
Q ss_pred C-------CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe----ecccccEEEEEEcC--CeEEEeecCCcEEE
Q psy16373 84 C-------GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI----QAHDGCIHALTYSD--SYVISLGQDERLCV 150 (166)
Q Consensus 84 ~-------~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~----~~~~~~v~~i~~~~--~~l~~~~~d~~i~~ 150 (166)
. ..|.+++|+|++.++++|+.||.|++||+.+++.+..+ .+|.+.|++++|+| .+|++++.|+.|++
T Consensus 291 ~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~i 370 (380)
T 3iz6_a 291 PDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKI 370 (380)
T ss_dssp CSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEE
T ss_pred ccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEE
Confidence 2 34899999999999999999999999999999888777 67899999999998 49999999999999
Q ss_pred EECCcccc
Q psy16373 151 WDRFQGHL 158 (166)
Q Consensus 151 wd~~~~~~ 158 (166)
|++...+.
T Consensus 371 W~~~~~~~ 378 (380)
T 3iz6_a 371 WAFSGHRK 378 (380)
T ss_dssp EECCSSSS
T ss_pred EecCCCcc
Confidence 99987654
No 22
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.95 E-value=9.3e-26 Score=168.00 Aligned_cols=160 Identities=16% Similarity=0.247 Sum_probs=134.6
Q ss_pred ccceEEEEecCCCceEEEeeccccccee---ec------------------------------------eeeeeeeeccC
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMT---LT------------------------------------CCKVESTRAHH 44 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~------------------------------------~~~~~~~~~~~ 44 (166)
++.+.++++|+.|+.+++|+........ .. ......+.+|.
T Consensus 68 spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~ 147 (611)
T 1nr0_A 68 SPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQA 147 (611)
T ss_dssp CTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCS
T ss_pred CCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCC
Confidence 5667899999999999999974211100 00 00122456889
Q ss_pred CceEEEEe--cCc-EEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373 45 QPITVLEC--VSN-RVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS 121 (166)
Q Consensus 45 ~~i~~~~~--~~~-~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~ 121 (166)
..|.+++| ++. .|++|+.|+.|++||..+++....+.+|...|.+++|+|++.++++++.|++|++||+++++.+..
T Consensus 148 ~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~ 227 (611)
T 1nr0_A 148 RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGV 227 (611)
T ss_dssp SCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeee
Confidence 99999999 443 699999999999999999988889999999999999999999999999999999999999998888
Q ss_pred ee-------cccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeee
Q psy16373 122 IQ-------AHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 122 ~~-------~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~ 163 (166)
+. +|.+.|.+++|+| .+|++++.|+.|++||+++++.+.++.
T Consensus 228 ~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~ 278 (611)
T 1nr0_A 228 FEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIP 278 (611)
T ss_dssp CBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred eccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeec
Confidence 74 7999999999998 489999999999999999998877664
No 23
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.95 E-value=3.3e-25 Score=152.40 Aligned_cols=153 Identities=22% Similarity=0.409 Sum_probs=134.8
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH 81 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~ 81 (166)
+..+..+++|+.++.+++|+..... ....+.+|...|.+++| ++++|++|+.|+.|++||+++++.+..+.
T Consensus 74 ~~~~~~l~s~~~d~~i~vwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 146 (312)
T 4ery_A 74 SSDSNLLVSASDDKTLKIWDVSSGK-------CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP 146 (312)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCC-------EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred cCCCCEEEEECCCCEEEEEECCCCc-------EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec
Confidence 3456789999999999999976543 34467789999999999 78899999999999999999999999999
Q ss_pred CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee-cccccEEEEEEcC--CeEEEeecCCcEEEEECCcccc
Q psy16373 82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ-AHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHL 158 (166)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~-~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~ 158 (166)
.|..+|.+++|+|++.++++++.|+.+++||+++++.+..+. .+..++..++|+| .++++++.|+.|++||+++++.
T Consensus 147 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 226 (312)
T 4ery_A 147 AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKC 226 (312)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcE
Confidence 999999999999999999999999999999999998887764 4566899999998 4899999999999999999988
Q ss_pred eeeee
Q psy16373 159 LSTIQ 163 (166)
Q Consensus 159 ~~~~~ 163 (166)
+..+.
T Consensus 227 ~~~~~ 231 (312)
T 4ery_A 227 LKTYT 231 (312)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 77664
No 24
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.95 E-value=8.4e-26 Score=157.75 Aligned_cols=147 Identities=15% Similarity=0.263 Sum_probs=126.4
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccc---cee
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ---LLF 78 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~---~~~ 78 (166)
++.+..|++|+.|+.+++|+..... ......+.+|..+|.+++| ++++|++|+.|+.|++||+.++. .+.
T Consensus 70 sp~g~~l~s~s~D~~v~iw~~~~~~-----~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~ 144 (345)
T 3fm0_A 70 SPCGNYLASASFDATTCIWKKNQDD-----FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVS 144 (345)
T ss_dssp CTTSSEEEEEETTSCEEEEEECCC------EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred CCCCCEEEEEECCCcEEEEEccCCC-----eEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEE
Confidence 3456789999999999999875432 2234567899999999999 78999999999999999998753 455
Q ss_pred hhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe--eeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECC
Q psy16373 79 TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA--CMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRF 154 (166)
Q Consensus 79 ~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~ 154 (166)
.+.+|...|.+++|+|++.++++++.|+.+++||.++++ +...+.+|...|++++|+| .+|++++.|+.|++||..
T Consensus 145 ~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~ 224 (345)
T 3fm0_A 145 VLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQY 224 (345)
T ss_dssp EECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred EecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccc
Confidence 677899999999999999999999999999999998775 4567889999999999998 489999999999999974
Q ss_pred c
Q psy16373 155 Q 155 (166)
Q Consensus 155 ~ 155 (166)
.
T Consensus 225 ~ 225 (345)
T 3fm0_A 225 L 225 (345)
T ss_dssp C
T ss_pred c
Confidence 3
No 25
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.95 E-value=1.2e-26 Score=163.98 Aligned_cols=160 Identities=19% Similarity=0.242 Sum_probs=134.3
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTL 80 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~ 80 (166)
++.+..+++|+.|+.+++|+................+.+|...|.++.| .+..|++|+.|+.|++||+.+++.+..+
T Consensus 117 s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~ 196 (380)
T 3iz6_a 117 APNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIF 196 (380)
T ss_dssp CTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEE
T ss_pred CCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEe
Confidence 4456789999999999999986533222222334467799999999999 3567999999999999999998877655
Q ss_pred -----cCCCCceEEEEEcC-CCCEEEEecCCCcEEEEeCc-CCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEE
Q psy16373 81 -----HGHCGPITTLFIDG-VSMMSGSGSQDGLLCVWDTV-TGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVW 151 (166)
Q Consensus 81 -----~~~~~~v~~~~~~~-~~~~~~~~~~d~~v~~~d~~-~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~w 151 (166)
.+|...|.++++++ ++.++++|+.|+.|++||++ ..+.+..+.+|...|++++|+| .++++++.|+.|++|
T Consensus 197 ~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lw 276 (380)
T 3iz6_a 197 GSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLF 276 (380)
T ss_dssp CCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEE
T ss_pred ecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEE
Confidence 57899999999977 68999999999999999998 5577888999999999999998 489999999999999
Q ss_pred ECCcccceeeee
Q psy16373 152 DRFQGHLLSTIQ 163 (166)
Q Consensus 152 d~~~~~~~~~~~ 163 (166)
|+++++.+..+.
T Consensus 277 d~~~~~~~~~~~ 288 (380)
T 3iz6_a 277 DMRTGHQLQVYN 288 (380)
T ss_dssp ETTTTEEEEEEC
T ss_pred ECCCCcEEEEec
Confidence 999998876654
No 26
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.94 E-value=7.6e-26 Score=158.73 Aligned_cols=146 Identities=13% Similarity=0.064 Sum_probs=121.5
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH 83 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~ 83 (166)
...+++++.|+.+++|+....... .......|...+.+++| .+.+|++|+.|+.|++||+++++.+..+.+|
T Consensus 194 ~~~~~s~~~dg~v~~wd~~~~~~~-----~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~ 268 (357)
T 4g56_B 194 DTIFLSCGEDGRILLWDTRKPKPA-----TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVH 268 (357)
T ss_dssp SSCEEEEETTSCEEECCTTSSSCB-----CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCC
T ss_pred CceeeeeccCCceEEEECCCCcee-----eeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEecc
Confidence 357889999999999998654321 11233457788999999 3568999999999999999999999999999
Q ss_pred CCceEEEEEcCCC-CEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCcccc
Q psy16373 84 CGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGHL 158 (166)
Q Consensus 84 ~~~v~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~~ 158 (166)
...|.+++|+|++ .++++++.|++|++||+++++.+..+ +|.+.|++++|+| .+|++++.|+.|++||+.+...
T Consensus 269 ~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 269 SQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp SSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC----
T ss_pred ceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCc
Confidence 9999999999986 67899999999999999999877655 6999999999997 3899999999999999976443
No 27
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.94 E-value=2.8e-25 Score=157.71 Aligned_cols=152 Identities=20% Similarity=0.314 Sum_probs=131.5
Q ss_pred EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccc-------cce
Q psy16373 8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQ-------QLL 77 (166)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~-------~~~ 77 (166)
..+++++.++.+.+|+....... ......+.+|..+|.+++| ++++|++|+.|+.|++||+.++ +.+
T Consensus 48 ~~~~~~~~~g~i~v~~~~~~~~~---~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~ 124 (402)
T 2aq5_A 48 ALICEASGGGAFLVLPLGKTGRV---DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPV 124 (402)
T ss_dssp EEEBCCSSSCCEEEEETTCCEEC---CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCS
T ss_pred EEEEEEcCCCEEEEEECccCCCC---CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCce
Confidence 45556888999999997543321 1233456789999999999 5689999999999999999987 567
Q ss_pred ehhcCCCCceEEEEEcCCC-CEEEEecCCCcEEEEeCcCCeeeEEe--ecccccEEEEEEcC--CeEEEeecCCcEEEEE
Q psy16373 78 FTLHGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYSI--QAHDGCIHALTYSD--SYVISLGQDERLCVWD 152 (166)
Q Consensus 78 ~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~~~~~~~--~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd 152 (166)
..+.+|...|.+++|+|++ ..+++++.|+.|++||+++++.+..+ ..|...|.+++|+| ..+++++.|+.|++||
T Consensus 125 ~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 204 (402)
T 2aq5_A 125 ITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIE 204 (402)
T ss_dssp EEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEE
T ss_pred EEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEe
Confidence 7888999999999999997 79999999999999999999999999 78999999999998 5899999999999999
Q ss_pred CCcccceeee
Q psy16373 153 RFQGHLLSTI 162 (166)
Q Consensus 153 ~~~~~~~~~~ 162 (166)
+++++.+..+
T Consensus 205 ~~~~~~~~~~ 214 (402)
T 2aq5_A 205 PRKGTVVAEK 214 (402)
T ss_dssp TTTTEEEEEE
T ss_pred CCCCceeeee
Confidence 9999888776
No 28
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.94 E-value=6.5e-25 Score=158.18 Aligned_cols=158 Identities=25% Similarity=0.340 Sum_probs=138.3
Q ss_pred ceEEEEecCCCceEEEeecccccceeece----------------eeeeeeeccCCceEEEEecCcEEEEEecCCeEEEE
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTC----------------CKVESTRAHHQPITVLECVSNRVITGSQDHTLKVY 69 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~ 69 (166)
.+..+++|+.++.+++|+........... .....+.+|...+.++..+++++++++.|+.|++|
T Consensus 216 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vw 295 (464)
T 3v7d_B 216 NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVW 295 (464)
T ss_dssp SCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEE
T ss_pred CCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEE
Confidence 45789999999999999986543221100 02445678999999998899999999999999999
Q ss_pred EcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEE
Q psy16373 70 KLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLC 149 (166)
Q Consensus 70 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~ 149 (166)
|+.+++.+..+.+|...|.+++++|++..+++++.|+.|++||+++++++..+.+|...|.++.|+++++++++.|+.|+
T Consensus 296 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~ 375 (464)
T 3v7d_B 296 DVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIR 375 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEEETTSEEE
T ss_pred ECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEECCcccceeeee
Q psy16373 150 VWDRFQGHLLSTIQ 163 (166)
Q Consensus 150 ~wd~~~~~~~~~~~ 163 (166)
+||++++.....+.
T Consensus 376 vwd~~~~~~~~~~~ 389 (464)
T 3v7d_B 376 GWDANDYSRKFSYH 389 (464)
T ss_dssp EEETTTCCEEEEEE
T ss_pred EEECCCCceeeeec
Confidence 99999887665543
No 29
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.94 E-value=3.6e-25 Score=164.86 Aligned_cols=146 Identities=16% Similarity=0.151 Sum_probs=126.6
Q ss_pred EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc----
Q psy16373 8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH---- 81 (166)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~---- 81 (166)
..+++|+.|+.+++|+.... ....++.+|...|.+++| ++++|++++.|+.|++||+.+++.+..+.
T Consensus 161 ~~l~s~s~D~~v~lwd~~~~-------~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~ 233 (611)
T 1nr0_A 161 FRIISGSDDNTVAIFEGPPF-------KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSL 233 (611)
T ss_dssp CEEEEEETTSCEEEEETTTB-------EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTS
T ss_pred eEEEEEeCCCeEEEEECCCC-------eEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccc
Confidence 47999999999999986432 234567899999999999 88999999999999999999888777663
Q ss_pred ---CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE-------------------------------------
Q psy16373 82 ---GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS------------------------------------- 121 (166)
Q Consensus 82 ---~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~------------------------------------- 121 (166)
+|...|.+++|+|++.++++++.|++|++||+++++.+..
T Consensus 234 ~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~ 313 (611)
T 1nr0_A 234 KNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPEL 313 (611)
T ss_dssp SSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTT
T ss_pred cccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCC
Confidence 7999999999999999999999999999999987765433
Q ss_pred ------eecccccEEEEEEcC--CeEEEeecCCcEEEEECCccccee
Q psy16373 122 ------IQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLS 160 (166)
Q Consensus 122 ------~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~ 160 (166)
+.+|...|++++|+| .+|++++.|+.|++||+.+++...
T Consensus 314 ~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~ 360 (611)
T 1nr0_A 314 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNR 360 (611)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE
T ss_pred CCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceee
Confidence 346888999999998 499999999999999999876544
No 30
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.94 E-value=2e-25 Score=156.58 Aligned_cols=157 Identities=17% Similarity=0.214 Sum_probs=121.4
Q ss_pred ccceEEEEecCC------CceEEEeecccccceeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccc
Q psy16373 4 SVHRIHLRTGSA------GSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQL 76 (166)
Q Consensus 4 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~ 76 (166)
++.+.+|++|+. |+.+.+|+........ .......+|...|.+++| ..+.+++++.|+.|++||+.+++.
T Consensus 51 SpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~---~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~ 127 (357)
T 4g56_B 51 RRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNE---SLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELWEILEKES 127 (357)
T ss_dssp CSSSCEEEEEECSSSSSCCEEEEEESSCC---CG---GGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC-------
T ss_pred CCCCCEEEEEcCCCCccccCeEEEEECCCCCcce---eEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccce
Confidence 566788999987 5667777654332111 122234578889999999 556778889999999999998765
Q ss_pred eeh----hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC---CeEEEeecCCcEE
Q psy16373 77 LFT----LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD---SYVISLGQDERLC 149 (166)
Q Consensus 77 ~~~----~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~ 149 (166)
... ..+|...|.+++|+|+++++++++.|+.|++||+++++.+..+.+|...|++++|++ ..+++++.|+.|+
T Consensus 128 ~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~ 207 (357)
T 4g56_B 128 LLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRIL 207 (357)
T ss_dssp -CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEE
T ss_pred eEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceE
Confidence 432 347899999999999999999999999999999999999999999999999999987 3789999999999
Q ss_pred EEECCcccceeeee
Q psy16373 150 VWDRFQGHLLSTIQ 163 (166)
Q Consensus 150 ~wd~~~~~~~~~~~ 163 (166)
+||+++++++..+.
T Consensus 208 ~wd~~~~~~~~~~~ 221 (357)
T 4g56_B 208 LWDTRKPKPATRID 221 (357)
T ss_dssp ECCTTSSSCBCBCC
T ss_pred EEECCCCceeeeee
Confidence 99999988776544
No 31
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.94 E-value=8.8e-25 Score=149.68 Aligned_cols=145 Identities=14% Similarity=0.236 Sum_probs=122.5
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c--CcEEEEEecCCeEEEEEcccccc--eehh
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V--SNRVITGSQDHTLKVYKLEDQQL--LFTL 80 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~--~~~l~~~~~d~~v~v~~~~~~~~--~~~~ 80 (166)
+..|++|+.|+.+++|+..... ......+.+|...|.+++| + +.+|++++.|+.|++||+++... ...+
T Consensus 67 g~~l~s~s~D~~v~iWd~~~~~-----~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 141 (297)
T 2pm7_B 67 GTILASCSYDGKVMIWKEENGR-----WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIII 141 (297)
T ss_dssp CSEEEEEETTTEEEEEEBSSSC-----BCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEE
T ss_pred CCEEEEEcCCCEEEEEEcCCCc-----eEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeee
Confidence 5689999999999999986432 1223356689999999999 3 67999999999999999987632 3456
Q ss_pred cCCCCceEEEEEcCC-------------CCEEEEecCCCcEEEEeCcCCe----eeEEeecccccEEEEEEcCC-----e
Q psy16373 81 HGHCGPITTLFIDGV-------------SMMSGSGSQDGLLCVWDTVTGA----CMYSIQAHDGCIHALTYSDS-----Y 138 (166)
Q Consensus 81 ~~~~~~v~~~~~~~~-------------~~~~~~~~~d~~v~~~d~~~~~----~~~~~~~~~~~v~~i~~~~~-----~ 138 (166)
.+|...|.+++|+|+ ++++++|+.|+.|++||+++++ ....+.+|...|.+++|+|+ +
T Consensus 142 ~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~ 221 (297)
T 2pm7_B 142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY 221 (297)
T ss_dssp ECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred ecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceE
Confidence 789999999999996 4699999999999999998765 56678899999999999984 7
Q ss_pred EEEeecCCcEEEEECCcc
Q psy16373 139 VISLGQDERLCVWDRFQG 156 (166)
Q Consensus 139 l~~~~~d~~i~~wd~~~~ 156 (166)
|++++.|+.|++||++++
T Consensus 222 las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 222 MASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp EEEEETTSCEEEEEESST
T ss_pred EEEEECCCcEEEEEeCCC
Confidence 999999999999999774
No 32
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.94 E-value=9.2e-25 Score=164.64 Aligned_cols=156 Identities=15% Similarity=0.179 Sum_probs=132.3
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC 84 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~ 84 (166)
..++++|+.|+.+++|+....... .......+.+|...|.+++| ++++|++|+.|+.|++||+.+++....+.+|.
T Consensus 395 ~~~l~s~s~D~~i~~W~~~~~~~~--~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~ 472 (694)
T 3dm0_A 395 ADIIVSASRDKSIILWKLTKDDKA--YGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHT 472 (694)
T ss_dssp CSEEEEEETTSEEEEEECCCSTTC--SCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred CCEEEEEeCCCcEEEEEccCCCcc--cccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCC
Confidence 458999999999999998654321 12234567899999999999 88999999999999999999999999999999
Q ss_pred CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe---ecccccEEEEEEcCC----eEEEeecCCcEEEEECCccc
Q psy16373 85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI---QAHDGCIHALTYSDS----YVISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~---~~~~~~v~~i~~~~~----~l~~~~~d~~i~~wd~~~~~ 157 (166)
..|.+++|+|++..+++++.|++|++||.......... .+|...|.+++|+|+ .+++++.|+.|++||+++++
T Consensus 473 ~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~ 552 (694)
T 3dm0_A 473 KDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCK 552 (694)
T ss_dssp SCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCC
T ss_pred CCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCc
Confidence 99999999999999999999999999998755433322 468889999999983 69999999999999999988
Q ss_pred ceeeeee
Q psy16373 158 LLSTIQL 164 (166)
Q Consensus 158 ~~~~~~~ 164 (166)
....+..
T Consensus 553 ~~~~~~~ 559 (694)
T 3dm0_A 553 LRSTLAG 559 (694)
T ss_dssp EEEEECC
T ss_pred EEEEEcC
Confidence 7766643
No 33
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=4e-25 Score=156.73 Aligned_cols=151 Identities=17% Similarity=0.212 Sum_probs=122.9
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccc---------
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQ--------- 74 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~--------- 74 (166)
.+..+++|+.|+.+++|+..................+|...|.+++| ++.+|++|+.|+.|++||+++.
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 297 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP 297 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence 56789999999999999976543211111111223579999999999 7889999999999999999763
Q ss_pred ---cceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--------CeEEEee
Q psy16373 75 ---QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--------SYVISLG 143 (166)
Q Consensus 75 ---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--------~~l~~~~ 143 (166)
.....+.+|...|.+++++|++.++++++.|+.|++||+++++++..+.+|...|.+++|++ +.+++++
T Consensus 298 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs 377 (393)
T 1erj_A 298 NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGS 377 (393)
T ss_dssp ---CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEE
T ss_pred CCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEEC
Confidence 23445678999999999999999999999999999999999999999999999999999975 3799999
Q ss_pred cCCcEEEEECCcc
Q psy16373 144 QDERLCVWDRFQG 156 (166)
Q Consensus 144 ~d~~i~~wd~~~~ 156 (166)
.|+.|++|+++..
T Consensus 378 ~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 378 GDCKARIWKYKKI 390 (393)
T ss_dssp TTSEEEEEEEEEC
T ss_pred CCCcEEECccccc
Confidence 9999999998654
No 34
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.94 E-value=6.7e-26 Score=156.52 Aligned_cols=148 Identities=16% Similarity=0.190 Sum_probs=124.3
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-c---CcEEEEEecCCeEEEEEccccc--ce
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-V---SNRVITGSQDHTLKVYKLEDQQ--LL 77 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~---~~~l~~~~~d~~v~v~~~~~~~--~~ 77 (166)
++.+..|++|+.|+.+++|+..... ......+.+|..+|.+++| . +++|++|+.|++|++||+++++ ..
T Consensus 22 s~~g~~lasgs~D~~v~lwd~~~~~-----~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~ 96 (316)
T 3bg1_A 22 DYYGTRLATCSSDRSVKIFDVRNGG-----QILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKS 96 (316)
T ss_dssp CGGGCEEEEEETTTEEEEEEEETTE-----EEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEE
T ss_pred cCCCCEEEEEeCCCeEEEEEecCCC-----cEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEE
Confidence 4557789999999999999976432 1234567899999999999 2 6899999999999999998863 55
Q ss_pred ehhcCCCCceEEEEEcCC--CCEEEEecCCCcEEEEeCcCCe---eeEEeecccccEEEEEEcCC---------------
Q psy16373 78 FTLHGHCGPITTLFIDGV--SMMSGSGSQDGLLCVWDTVTGA---CMYSIQAHDGCIHALTYSDS--------------- 137 (166)
Q Consensus 78 ~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~~---~~~~~~~~~~~v~~i~~~~~--------------- 137 (166)
..+.+|...|.+++|+|+ +.++++++.|+.+++||++.+. ....+.+|...|.+++|+|+
T Consensus 97 ~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~ 176 (316)
T 3bg1_A 97 HEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKP 176 (316)
T ss_dssp EEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCC
T ss_pred EEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCc
Confidence 667789999999999998 7899999999999999998753 23455678889999999874
Q ss_pred ----eEEEeecCCcEEEEECCcc
Q psy16373 138 ----YVISLGQDERLCVWDRFQG 156 (166)
Q Consensus 138 ----~l~~~~~d~~i~~wd~~~~ 156 (166)
.|++++.|+.|++||++.+
T Consensus 177 ~~~~~l~sgs~D~~v~lWd~~~~ 199 (316)
T 3bg1_A 177 NYIKRFASGGCDNLIKLWKEEED 199 (316)
T ss_dssp CCCCBEECCBTTSBCCEEEECTT
T ss_pred cccceEEEecCCCeEEEEEeCCC
Confidence 7999999999999999754
No 35
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.94 E-value=7e-25 Score=154.28 Aligned_cols=146 Identities=14% Similarity=0.064 Sum_probs=121.9
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCC----eEEEEEcccccc-
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDH----TLKVYKLEDQQL- 76 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~----~v~v~~~~~~~~- 76 (166)
++.+.++++++.++++++|...... .......+|...|.+++| ++..+++++.|+ .+++|++.....
T Consensus 185 spdg~~l~s~s~~~~~~~~~~~~~~------~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~ 258 (365)
T 4h5i_A 185 STDGKVVAYITGSSLEVISTVTGSC------IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTS 258 (365)
T ss_dssp CTTSSEEEEECSSCEEEEETTTCCE------EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEE
T ss_pred ccCCceEEeccceeEEEEEeccCcc------eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceec
Confidence 4567788999988888887754332 122234578889999999 888999999887 688899876532
Q ss_pred ---eehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe-ecccccEEEEEEcC--CeEEEeecCCcEEE
Q psy16373 77 ---LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI-QAHDGCIHALTYSD--SYVISLGQDERLCV 150 (166)
Q Consensus 77 ---~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~v~~i~~~~--~~l~~~~~d~~i~~ 150 (166)
...+.+|...|++++|+|+++++++|+.|++|++||+++++++..+ .+|..+|++++|+| .+|++++.|++|++
T Consensus 259 ~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrv 338 (365)
T 4h5i_A 259 VLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHI 338 (365)
T ss_dssp EEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred ceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 3456789999999999999999999999999999999999999885 78999999999999 49999999999999
Q ss_pred EECCc
Q psy16373 151 WDRFQ 155 (166)
Q Consensus 151 wd~~~ 155 (166)
||+..
T Consensus 339 w~ip~ 343 (365)
T 4h5i_A 339 IKLPL 343 (365)
T ss_dssp EECCT
T ss_pred EEcCC
Confidence 99854
No 36
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=2.1e-24 Score=149.13 Aligned_cols=157 Identities=12% Similarity=0.198 Sum_probs=129.4
Q ss_pred eEEEEecCCCceEEEeeccccccee--eceeeeeeeeccCCceEEEEe--c--CcEEEEEecCCeEEEEEcccccc----
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMT--LTCCKVESTRAHHQPITVLEC--V--SNRVITGSQDHTLKVYKLEDQQL---- 76 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~--~--~~~l~~~~~d~~v~v~~~~~~~~---- 76 (166)
+..+++|+.|+.+++|+........ ........+.+|..+|.+++| + +++|++++.|+.|++||+++++.
T Consensus 71 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 150 (351)
T 3f3f_A 71 GRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSW 150 (351)
T ss_dssp CSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCC
T ss_pred CCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccc
Confidence 6789999999999999986543211 111345567789999999999 5 88999999999999999875432
Q ss_pred --------------------------------------------------------eehhcCCCCceEEEEEcCCC----
Q psy16373 77 --------------------------------------------------------LFTLHGHCGPITTLFIDGVS---- 96 (166)
Q Consensus 77 --------------------------------------------------------~~~~~~~~~~v~~~~~~~~~---- 96 (166)
+..+.+|...|.+++|+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~ 230 (351)
T 3f3f_A 151 TLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWY 230 (351)
T ss_dssp EEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSS
T ss_pred cccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcc
Confidence 33455788999999999998
Q ss_pred CEEEEecCCCcEEEEeCcCC----------------------------------------------eeeEEeecccccEE
Q psy16373 97 MMSGSGSQDGLLCVWDTVTG----------------------------------------------ACMYSIQAHDGCIH 130 (166)
Q Consensus 97 ~~~~~~~~d~~v~~~d~~~~----------------------------------------------~~~~~~~~~~~~v~ 130 (166)
.++++++.||.|++||++++ +.+..+.+|...|+
T Consensus 231 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 310 (351)
T 3f3f_A 231 QLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVW 310 (351)
T ss_dssp EEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEE
T ss_pred eEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEE
Confidence 89999999999999999875 56777888999999
Q ss_pred EEEEcC--CeEEEeecCCcEEEEECCcccceeeee
Q psy16373 131 ALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 131 ~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~ 163 (166)
+++|+| .+|++++.|+.|++||+.+++.+..+.
T Consensus 311 ~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 311 SVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp EEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred EEEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence 999998 489999999999999999887665544
No 37
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.93 E-value=2.1e-24 Score=153.11 Aligned_cols=145 Identities=22% Similarity=0.358 Sum_probs=123.9
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG 82 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~ 82 (166)
..+..+++|+.|+.+++|+..... ....+.+|...|.+++| ++++|++++.|+.|++||+++++....+.
T Consensus 133 ~dg~~l~s~~~d~~i~iwd~~~~~-------~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~- 204 (393)
T 1erj_A 133 PDGKFLATGAEDRLIRIWDIENRK-------IVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS- 204 (393)
T ss_dssp TTSSEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-
T ss_pred CCCCEEEEEcCCCeEEEEECCCCc-------EEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-
Confidence 456789999999999999976432 34467799999999999 78899999999999999999988776665
Q ss_pred CCCceEEEEEcC-CCCEEEEecCCCcEEEEeCcCCeeeEEe-------ecccccEEEEEEcC--CeEEEeecCCcEEEEE
Q psy16373 83 HCGPITTLFIDG-VSMMSGSGSQDGLLCVWDTVTGACMYSI-------QAHDGCIHALTYSD--SYVISLGQDERLCVWD 152 (166)
Q Consensus 83 ~~~~v~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~~~~~~~-------~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd 152 (166)
+...+.+++++| ++.++++++.|+.|++||+++++.+..+ .+|...|.+++|+| ..+++++.|+.|++||
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd 284 (393)
T 1erj_A 205 IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN 284 (393)
T ss_dssp CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 567899999999 7999999999999999999999877766 56889999999998 4899999999999999
Q ss_pred CCccc
Q psy16373 153 RFQGH 157 (166)
Q Consensus 153 ~~~~~ 157 (166)
+++..
T Consensus 285 ~~~~~ 289 (393)
T 1erj_A 285 LQNAN 289 (393)
T ss_dssp C----
T ss_pred CCCCC
Confidence 98643
No 38
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.93 E-value=2.9e-24 Score=152.57 Aligned_cols=153 Identities=17% Similarity=0.353 Sum_probs=134.4
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcc-cccceehhcCC
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLE-DQQLLFTLHGH 83 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~-~~~~~~~~~~~ 83 (166)
..+..+++|+.++.+.+|+..... ....+.+|...|.+++|+++.+++++.|+.|++||++ .......+.+|
T Consensus 144 ~~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~ 216 (401)
T 4aez_A 144 HDGSFLSVGLGNGLVDIYDVESQT-------KLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGH 216 (401)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCC-------EEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred CCCCEEEEECCCCeEEEEECcCCe-------EEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCC
Confidence 356688999999999999976443 3445678999999999999999999999999999998 45667788899
Q ss_pred CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC---CeEEEee--cCCcEEEEECCcccc
Q psy16373 84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD---SYVISLG--QDERLCVWDRFQGHL 158 (166)
Q Consensus 84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~--~d~~i~~wd~~~~~~ 158 (166)
...|.+++|+|++.++++++.|+.|++||+++++++..+..|...|.+++|+| ..+++++ .|+.|++||+++++.
T Consensus 217 ~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~ 296 (401)
T 4aez_A 217 SSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR 296 (401)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE
T ss_pred CCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE
Confidence 99999999999999999999999999999999999999999999999999998 3666655 699999999999998
Q ss_pred eeeeee
Q psy16373 159 LSTIQL 164 (166)
Q Consensus 159 ~~~~~~ 164 (166)
+..+..
T Consensus 297 ~~~~~~ 302 (401)
T 4aez_A 297 VNTVDA 302 (401)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 887754
No 39
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.93 E-value=4.7e-25 Score=156.87 Aligned_cols=152 Identities=21% Similarity=0.271 Sum_probs=129.9
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG 82 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~ 82 (166)
..+..+++|+.++.+++|+..... ....+.+|...|.+++| ++++|++++.|+.|++||+.+++.+..+.+
T Consensus 107 ~~~~~l~~~~~dg~i~iwd~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~ 179 (420)
T 3vl1_A 107 LQMRRFILGTTEGDIKVLDSNFNL-------QREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIG 179 (420)
T ss_dssp SSSCEEEEEETTSCEEEECTTSCE-------EEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEEC
T ss_pred cCCCEEEEEECCCCEEEEeCCCcc-------eeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcC
Confidence 456689999999999999976432 23345689999999999 788999999999999999999999999999
Q ss_pred CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec---ccccEEEEEE---------------------cC--
Q psy16373 83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA---HDGCIHALTY---------------------SD-- 136 (166)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~---~~~~v~~i~~---------------------~~-- 136 (166)
|...|.+++|+|++..+++++.|+.+++||+++++.+..+.. +...+.+++| +|
T Consensus 180 h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 259 (420)
T 3vl1_A 180 HRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG 259 (420)
T ss_dssp CSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT
T ss_pred CCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC
Confidence 999999999999999999999999999999999999888875 3345555554 55
Q ss_pred CeEEEeecCCcEEEEECCcccceeeee
Q psy16373 137 SYVISLGQDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 137 ~~l~~~~~d~~i~~wd~~~~~~~~~~~ 163 (166)
.++++++.|+.|++||+++++.+..+.
T Consensus 260 ~~l~~~~~dg~i~i~d~~~~~~~~~~~ 286 (420)
T 3vl1_A 260 KYVIAGHVSGVITVHNVFSKEQTIQLP 286 (420)
T ss_dssp EEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred CEEEEEcCCCeEEEEECCCCceeEEcc
Confidence 389999999999999999988776653
No 40
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.93 E-value=4e-25 Score=158.59 Aligned_cols=151 Identities=16% Similarity=0.174 Sum_probs=121.6
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccc---------
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQ--------- 74 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~--------- 74 (166)
+.+|++|+.|+.|++|+...... .....+.+|..+|++++| ++++|++|+.|++|++||++++
T Consensus 132 ~~~lasGs~dg~i~lWd~~~~~~-----~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 206 (435)
T 4e54_B 132 PSTVAVGSKGGDIMLWNFGIKDK-----PTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSD 206 (435)
T ss_dssp TTCEEEEETTSCEEEECSSCCSC-----CEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCS
T ss_pred CCEEEEEeCCCEEEEEECCCCCc-----eeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccC
Confidence 45799999999999999865431 223345689999999999 4679999999999999998632
Q ss_pred ----------------------------------cceehhcCCCCceEEEEEcCCCC-EEEEecCCCcEEEEeCcCCeee
Q psy16373 75 ----------------------------------QLLFTLHGHCGPITTLFIDGVSM-MSGSGSQDGLLCVWDTVTGACM 119 (166)
Q Consensus 75 ----------------------------------~~~~~~~~~~~~v~~~~~~~~~~-~~~~~~~d~~v~~~d~~~~~~~ 119 (166)
+.+..+.+|...|.+++|+|++. ++++++.|+.|++||+++.+..
T Consensus 207 ~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~ 286 (435)
T 4e54_B 207 TINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGK 286 (435)
T ss_dssp SCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSS
T ss_pred CCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEeccccccc
Confidence 12234467888999999999865 7889999999999999877654
Q ss_pred EE---eecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeee
Q psy16373 120 YS---IQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTI 162 (166)
Q Consensus 120 ~~---~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~ 162 (166)
.. ..+|..+|++++|+| .+|++++.|+.|++||+++++....+
T Consensus 287 ~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~ 334 (435)
T 4e54_B 287 ASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGL 334 (435)
T ss_dssp SCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEE
T ss_pred ceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEE
Confidence 43 356889999999998 49999999999999999998776554
No 41
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.93 E-value=6.5e-24 Score=146.56 Aligned_cols=158 Identities=18% Similarity=0.212 Sum_probs=132.3
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccc--ceeh
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ--LLFT 79 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~--~~~~ 79 (166)
+..+..+++++ ++.+++|+........ ........+|..+|.+++| ++++|++++.|+.|++||+.+++ ....
T Consensus 60 ~~~~~~l~~~~-dg~i~iw~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~ 136 (337)
T 1gxr_A 60 SNPTRHVYTGG-KGCVKVWDISHPGNKS--PVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAE 136 (337)
T ss_dssp CSSSSEEEEEC-BSEEEEEETTSTTCCS--CSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEE
T ss_pred ecCCcEEEEcC-CCeEEEEECCCCCcee--eeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeee
Confidence 34566788888 8999999986543211 1111122378899999999 78899999999999999999876 5566
Q ss_pred hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373 80 LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~ 157 (166)
+..|...+.+++|+|+++.+++++.|+.+++||+++++.+..+..|...+.+++|+| +.+++++.|+.|++||+++++
T Consensus 137 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~ 216 (337)
T 1gxr_A 137 LTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGR 216 (337)
T ss_dssp EECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred cccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCc
Confidence 778999999999999999999999999999999999999999999999999999998 489999999999999999998
Q ss_pred ceeeeee
Q psy16373 158 LLSTIQL 164 (166)
Q Consensus 158 ~~~~~~~ 164 (166)
.+..+..
T Consensus 217 ~~~~~~~ 223 (337)
T 1gxr_A 217 QLQQHDF 223 (337)
T ss_dssp EEEEEEC
T ss_pred eEeeecC
Confidence 8776653
No 42
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.93 E-value=1.3e-24 Score=154.21 Aligned_cols=153 Identities=12% Similarity=0.152 Sum_probs=130.7
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cC-cEEEEEecCCeEEEEEcccccceehh--
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VS-NRVITGSQDHTLKVYKLEDQQLLFTL-- 80 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~-~~l~~~~~d~~v~v~~~~~~~~~~~~-- 80 (166)
.+..+++|+.|+.+++|+................+.+|...|.+++| ++ ++|++++.|+.|++||+++++.+..+
T Consensus 93 ~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 172 (402)
T 2aq5_A 93 NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP 172 (402)
T ss_dssp CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT
T ss_pred CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec
Confidence 56789999999999999987653222222345567899999999999 44 69999999999999999999998888
Q ss_pred cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe-eccccc-EEEEEEcCC--eEEEe---ecCCcEEEEEC
Q psy16373 81 HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI-QAHDGC-IHALTYSDS--YVISL---GQDERLCVWDR 153 (166)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~-v~~i~~~~~--~l~~~---~~d~~i~~wd~ 153 (166)
..|...|.+++|+|++..+++++.|+.+++||+++++.+..+ ..|.+. +..+.|+|+ +++++ +.|+.|++||+
T Consensus 173 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~ 252 (402)
T 2aq5_A 173 DVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDT 252 (402)
T ss_dssp TTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEET
T ss_pred CCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcC
Confidence 789999999999999999999999999999999999999888 678765 889999983 66666 68999999999
Q ss_pred Ccccc
Q psy16373 154 FQGHL 158 (166)
Q Consensus 154 ~~~~~ 158 (166)
++++.
T Consensus 253 ~~~~~ 257 (402)
T 2aq5_A 253 KHLEE 257 (402)
T ss_dssp TBCSS
T ss_pred ccccC
Confidence 98765
No 43
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.93 E-value=1.1e-23 Score=146.92 Aligned_cols=143 Identities=15% Similarity=0.285 Sum_probs=120.8
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccce--ehh
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLL--FTL 80 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~--~~~ 80 (166)
..+..+++|+.|+.+++|+..... ....+.+|..+|.+++| ++++|++++.|+.|++||+...... ...
T Consensus 86 ~~~~~l~s~s~D~~v~lwd~~~~~-------~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 158 (343)
T 2xzm_R 86 QENCFAISSSWDKTLRLWDLRTGT-------TYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEK 158 (343)
T ss_dssp SSTTEEEEEETTSEEEEEETTSSC-------EEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTT
T ss_pred CCCCEEEEEcCCCcEEEEECCCCc-------EEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecc
Confidence 345678999999999999986543 34467799999999999 7889999999999999999744322 223
Q ss_pred cCCCCceEEEEEcCCC----------CEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcE
Q psy16373 81 HGHCGPITTLFIDGVS----------MMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERL 148 (166)
Q Consensus 81 ~~~~~~v~~~~~~~~~----------~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i 148 (166)
..|...|.+++|+|++ .++++++.|+.|++|| .+.+....+.+|...|.+++|+| .+|++++.|+.|
T Consensus 159 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v 237 (343)
T 2xzm_R 159 ENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKL 237 (343)
T ss_dssp TSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEE
T ss_pred cCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeE
Confidence 3688999999999986 7899999999999999 45677788899999999999998 489999999999
Q ss_pred EEEECCc
Q psy16373 149 CVWDRFQ 155 (166)
Q Consensus 149 ~~wd~~~ 155 (166)
++||+++
T Consensus 238 ~iwd~~~ 244 (343)
T 2xzm_R 238 LIWDILN 244 (343)
T ss_dssp EEEESSC
T ss_pred EEEECCC
Confidence 9999954
No 44
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.93 E-value=1.8e-24 Score=159.41 Aligned_cols=139 Identities=17% Similarity=0.325 Sum_probs=124.0
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH 81 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~ 81 (166)
++....+++++.|+.+++|+... .....+.+|..+|.+++| ++.+|++++.|+.|++||. +++.+..+.
T Consensus 435 s~d~~~l~~~~~d~~v~~w~~~~--------~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~ 505 (577)
T 2ymu_A 435 SPDDQTIASASDDKTVKLWNRNG--------QLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT 505 (577)
T ss_dssp CTTSSEEEEEETTSEEEEEETTS--------CEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEE
T ss_pred CCCCCEEEEEcCCCEEEEEECCC--------CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEe
Confidence 34456889999999999998532 234467789999999999 8899999999999999995 578888899
Q ss_pred CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEE
Q psy16373 82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWD 152 (166)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd 152 (166)
+|...|++++|+|+++++++++.|+.|++||. +++.+..+.+|.+.|++++|+| .+|++++.|+.|++||
T Consensus 506 ~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 506 GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 99999999999999999999999999999995 6888999999999999999998 4899999999999997
No 45
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.93 E-value=2.3e-24 Score=162.53 Aligned_cols=153 Identities=18% Similarity=0.224 Sum_probs=131.5
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccccee---
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF--- 78 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~--- 78 (166)
+..+.++++|+.|+.+++|+..... ....+.+|...|.+++| ++++|++++.|+.|++||........
T Consensus 439 s~~g~~l~sgs~Dg~v~vwd~~~~~-------~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~ 511 (694)
T 3dm0_A 439 SSDGQFALSGSWDGELRLWDLAAGV-------STRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISE 511 (694)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTE-------EEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECS
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCc-------ceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeecc
Confidence 3456789999999999999986432 33467799999999999 78899999999999999986543322
Q ss_pred hhcCCCCceEEEEEcCCC--CEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECC
Q psy16373 79 TLHGHCGPITTLFIDGVS--MMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRF 154 (166)
Q Consensus 79 ~~~~~~~~v~~~~~~~~~--~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~ 154 (166)
...+|...|.+++|+|++ ..+++++.|+.|++||+++++....+.+|...|++++|+| .++++++.|+.|++||++
T Consensus 512 ~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~ 591 (694)
T 3dm0_A 512 GGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA 591 (694)
T ss_dssp STTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETT
T ss_pred CCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC
Confidence 234688999999999985 6899999999999999999999999999999999999998 489999999999999999
Q ss_pred cccceeeee
Q psy16373 155 QGHLLSTIQ 163 (166)
Q Consensus 155 ~~~~~~~~~ 163 (166)
+++.+..+.
T Consensus 592 ~~~~~~~~~ 600 (694)
T 3dm0_A 592 EGKKLYSLE 600 (694)
T ss_dssp TTEEEECCB
T ss_pred CCceEEEec
Confidence 998876654
No 46
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.93 E-value=4.1e-24 Score=153.23 Aligned_cols=150 Identities=21% Similarity=0.370 Sum_probs=132.1
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCC
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCG 85 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~ 85 (166)
.+..+++|+.++.+++|+....+ ....+.+|..+|.+++++++.|++|+.||.|++||+.+++.+..+.+|..
T Consensus 142 d~~~l~~g~~dg~i~iwd~~~~~-------~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~ 214 (435)
T 1p22_A 142 DDQKIVSGLRDNTIKIWDKNTLE-------CKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEMLNTLIHHCE 214 (435)
T ss_dssp CSSEEEEEESSSCEEEEESSSCC-------EEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEEEEECCCCS
T ss_pred CCCEEEEEeCCCeEEEEeCCCCe-------EEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCC
Confidence 45688999999999999975432 34467799999999999999999999999999999999999999999999
Q ss_pred ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeee---EEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeee
Q psy16373 86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACM---YSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTI 162 (166)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~---~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 162 (166)
.|.++++++ ..+++++.||.|++||++++... ..+.+|...|.++.|+++.+++++.|+.|++||+++++.+.++
T Consensus 215 ~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 292 (435)
T 1p22_A 215 AVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTL 292 (435)
T ss_dssp CEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred cEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEE
Confidence 999999974 58999999999999999887655 5677889999999998899999999999999999999888777
Q ss_pred ee
Q psy16373 163 QL 164 (166)
Q Consensus 163 ~~ 164 (166)
..
T Consensus 293 ~~ 294 (435)
T 1p22_A 293 NG 294 (435)
T ss_dssp EC
T ss_pred cC
Confidence 64
No 47
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.93 E-value=1.1e-24 Score=155.02 Aligned_cols=153 Identities=18% Similarity=0.149 Sum_probs=129.6
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH 81 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~ 81 (166)
+..+..+++++.++.+++|+...... ...+..| ..+....+ ++++|++++.|+.|++||+.+++....+.
T Consensus 65 s~~g~~l~~~~~d~~v~i~d~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 136 (420)
T 3vl1_A 65 EKVGSHLYKARLDGHDFLFNTIIRDG-------SKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ 136 (420)
T ss_dssp EEEETTEEEEEETTEEEEEECCSEET-------TTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT
T ss_pred eecCCeEEEEEcCCcEEEEEecccce-------eeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc
Confidence 34456789999999999999754431 1122333 22333344 88899999999999999999999888888
Q ss_pred CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373 82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL 159 (166)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~ 159 (166)
+|...|.+++|+|++.++++++.|+.|++||+++++.+..+.+|...|.+++|+| ..+++++.|+.|++||+++++.+
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTI 216 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCcee
Confidence 9999999999999999999999999999999999999999999999999999998 48999999999999999999988
Q ss_pred eeeee
Q psy16373 160 STIQL 164 (166)
Q Consensus 160 ~~~~~ 164 (166)
..+..
T Consensus 217 ~~~~~ 221 (420)
T 3vl1_A 217 HTFNR 221 (420)
T ss_dssp EEECB
T ss_pred EEeec
Confidence 87753
No 48
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=6.4e-25 Score=160.78 Aligned_cols=157 Identities=11% Similarity=0.061 Sum_probs=128.1
Q ss_pred eEEEEecCCCceEEEeeccccccee----eceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEccccc-ceehh
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMT----LTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQ-LLFTL 80 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~-~~~~~ 80 (166)
+.+|++++.|+.+++|+........ ....+...+.+|..+|.+++| .+..|++|+.||+|++||+++++ +...+
T Consensus 225 ~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~DgtV~lWD~~~~~~~~~~~ 304 (524)
T 2j04_B 225 VGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFKNGFVAEFDLTDPEVPSFYD 304 (524)
T ss_dssp SCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEETTSEEEEEETTBCSSCSEEE
T ss_pred CceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeCCCEEEEEECCCCCCceEEe
Confidence 4589999999999999986543110 011233467789999999999 66799999999999999999763 44567
Q ss_pred cCCCCceEEE--EEcCCC-CEEEEecCCCcEEEEeCcCCeeeEEeecccc--cEEEEEEcC--CeEEEeecCCcEEEEEC
Q psy16373 81 HGHCGPITTL--FIDGVS-MMSGSGSQDGLLCVWDTVTGACMYSIQAHDG--CIHALTYSD--SYVISLGQDERLCVWDR 153 (166)
Q Consensus 81 ~~~~~~v~~~--~~~~~~-~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~--~v~~i~~~~--~~l~~~~~d~~i~~wd~ 153 (166)
.+|...|.++ +++|++ .++++++.|+++++||+++++++..+.+|.. .|.+++|+| ..+++++.|+.|++||+
T Consensus 305 ~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~ 384 (524)
T 2j04_B 305 QVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPS 384 (524)
T ss_dssp ECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEET
T ss_pred ecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEEC
Confidence 8899999999 567877 8999999999999999999887777776653 578999999 37899999999999999
Q ss_pred Ccccceeeee
Q psy16373 154 FQGHLLSTIQ 163 (166)
Q Consensus 154 ~~~~~~~~~~ 163 (166)
+++.++.++.
T Consensus 385 ~~~~~~~~l~ 394 (524)
T 2j04_B 385 RAAFAVHPLV 394 (524)
T ss_dssp TCTTCCEEEE
T ss_pred cccccceeee
Confidence 9988766654
No 49
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.2e-24 Score=166.61 Aligned_cols=158 Identities=12% Similarity=0.180 Sum_probs=127.6
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeee-----eccCCceEEEEe--cCcEEEEEecCCeEEEEEccccc-
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVEST-----RAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ- 75 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~- 75 (166)
+..+..+++|+.|+.+++|+............. ..+ .+|...|.+++| ++.+|++|+.|++|++||+.+++
T Consensus 444 spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~-~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~ 522 (902)
T 2oaj_A 444 AEYGTAFITGHSNGSVRIYDASHGDIQDNASFE-VNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQF 522 (902)
T ss_dssp CSEEEEEEEEETTSEEEEEESSCCTTTTTBCEE-EEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC
T ss_pred cccCcEEEEecCCCcEEEEECCCccccCCceEE-eechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccc
Confidence 456889999999999999998654311100000 011 278899999999 89999999999999999998662
Q ss_pred --------------------------------------------ceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEE
Q psy16373 76 --------------------------------------------LLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVW 111 (166)
Q Consensus 76 --------------------------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~ 111 (166)
++..+.+|.+.|++++|+|+| ++++|+.|++|++|
T Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lw 601 (902)
T 2oaj_A 523 YSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLI 601 (902)
T ss_dssp ---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEE
T ss_pred cCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEE
Confidence 255677899999999999999 99999999999999
Q ss_pred eCcCCeeeE-----Eee-cccccEEEEEEc-----CC-----eEEEeecCCcEEEEEC---Ccccceeeee
Q psy16373 112 DTVTGACMY-----SIQ-AHDGCIHALTYS-----DS-----YVISLGQDERLCVWDR---FQGHLLSTIQ 163 (166)
Q Consensus 112 d~~~~~~~~-----~~~-~~~~~v~~i~~~-----~~-----~l~~~~~d~~i~~wd~---~~~~~~~~~~ 163 (166)
|+++...+. .+. +|.+.|++++|+ |+ +|++++.|++|++||+ .+|+.+.++.
T Consensus 602 d~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~ 672 (902)
T 2oaj_A 602 DRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLM 672 (902)
T ss_dssp ETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEE
T ss_pred ECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEec
Confidence 998877654 233 788899999999 64 8999999999999999 7777665543
No 50
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.93 E-value=6.4e-24 Score=152.22 Aligned_cols=150 Identities=22% Similarity=0.307 Sum_probs=134.3
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccce---ehhcC
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLL---FTLHG 82 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~---~~~~~ 82 (166)
.+..+++|+.|+.+++|+..... ....+.+|...|.+++++++.+++|+.|+.|++||+.+++.. ..+.+
T Consensus 182 ~~~~l~sg~~dg~i~vwd~~~~~-------~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~ 254 (435)
T 1p22_A 182 DERVIITGSSDSTVRVWDVNTGE-------MLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVG 254 (435)
T ss_dssp CSSEEEEEETTSCEEEEESSSCC-------EEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECC
T ss_pred CCCEEEEEcCCCeEEEEECCCCc-------EEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecC
Confidence 45689999999999999986543 344667899999999998889999999999999999987655 56778
Q ss_pred CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeee
Q psy16373 83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTI 162 (166)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 162 (166)
|...|.++++ ++..+++++.||.+++||+++++.+..+.+|...|.++.|+++.+++++.|+.|++||+++++++.++
T Consensus 255 ~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~~~~~~~~ 332 (435)
T 1p22_A 255 HRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVL 332 (435)
T ss_dssp CSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEEEE
T ss_pred CCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCCCCEEEEE
Confidence 9999999999 67899999999999999999999999999999999999999999999999999999999999988877
Q ss_pred ee
Q psy16373 163 QL 164 (166)
Q Consensus 163 ~~ 164 (166)
..
T Consensus 333 ~~ 334 (435)
T 1p22_A 333 EG 334 (435)
T ss_dssp CC
T ss_pred eC
Confidence 64
No 51
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.93 E-value=4e-24 Score=151.02 Aligned_cols=145 Identities=12% Similarity=0.160 Sum_probs=127.9
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeec---c---CCceEEEEe--cCcEEEEEecC---CeEEEEEccc
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRA---H---HQPITVLEC--VSNRVITGSQD---HTLKVYKLED 73 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~i~~~~~--~~~~l~~~~~d---~~v~v~~~~~ 73 (166)
..+ .+++++.++.+.+|+..... ....+.. | ..+|.+++| ++.+|++++.| +.|++||+++
T Consensus 196 ~~~-~l~~~~~dg~i~i~d~~~~~-------~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~ 267 (397)
T 1sq9_A 196 ERG-LIATGFNNGTVQISELSTLR-------PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF 267 (397)
T ss_dssp TTS-EEEEECTTSEEEEEETTTTE-------EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTT
T ss_pred CCc-eEEEEeCCCcEEEEECCCCc-------eeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 345 89999999999999986432 3345556 8 899999999 78999999999 9999999999
Q ss_pred ccceehhcC-------------CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee------cc---------
Q psy16373 74 QQLLFTLHG-------------HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ------AH--------- 125 (166)
Q Consensus 74 ~~~~~~~~~-------------~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~------~~--------- 125 (166)
++.+..+.. |...|.+++|+|++.++++++.|+.|++||+++++.+..+. .|
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 347 (397)
T 1sq9_A 268 GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDE 347 (397)
T ss_dssp CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCT
T ss_pred CcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhcccc
Confidence 999888888 99999999999999999999999999999999999999998 77
Q ss_pred ------cccEEEEEEcCC------------eEEEeecCCcEEEEECCccc
Q psy16373 126 ------DGCIHALTYSDS------------YVISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 126 ------~~~v~~i~~~~~------------~l~~~~~d~~i~~wd~~~~~ 157 (166)
..+|++++|+|+ .|++++.|+.|++||+++++
T Consensus 348 ~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 348 HGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp TSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC--
T ss_pred ccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCCCC
Confidence 899999999985 79999999999999998764
No 52
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.93 E-value=4.1e-24 Score=153.53 Aligned_cols=149 Identities=27% Similarity=0.385 Sum_probs=127.9
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCC
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCG 85 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~ 85 (166)
.+..+++|+.|+.+++|+..... ....+.+|..+|.+++++++.+++|+.|+.|++||+.+++.+..+.+|..
T Consensus 128 ~g~~l~sg~~dg~i~vwd~~~~~-------~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~ 200 (445)
T 2ovr_B 128 CGNRIVSGSDDNTLKVWSAVTGK-------CLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGECIHTLYGHTS 200 (445)
T ss_dssp ETTEEEEEETTSCEEEEETTTCC-------EEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred cCCEEEEEECCCcEEEEECCCCc-------EEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECCcCcEEEEECCCCC
Confidence 45678999999999999976433 34456789999999999888999999999999999999988888888999
Q ss_pred ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeee
Q psy16373 86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~ 163 (166)
.|.++.++ +..+++++.||.+++||+++++.+..+.+|...|.++.|+++.+++++.|+.|++||+++++.+.++.
T Consensus 201 ~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 276 (445)
T 2ovr_B 201 TVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQ 276 (445)
T ss_dssp CEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEEC
T ss_pred cEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEec
Confidence 99999885 46788999999999999999988888888888999999977889999999999999998888777665
No 53
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.93 E-value=7.7e-24 Score=146.34 Aligned_cols=150 Identities=17% Similarity=0.266 Sum_probs=125.4
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-c---CcEEEEEecCCeEEEEEcccc-----
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-V---SNRVITGSQDHTLKVYKLEDQ----- 74 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~---~~~l~~~~~d~~v~v~~~~~~----- 74 (166)
+..+..|++|+.++.+++|+....... ......+.+|..+|.+++| . +++|++++.|+.|++||+.++
T Consensus 20 ~~~~~~l~~~~~dg~i~iw~~~~~~~~---~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~ 96 (351)
T 3f3f_A 20 DFYGRHVATCSSDQHIKVFKLDKDTSN---WELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECS 96 (351)
T ss_dssp CSSSSEEEEEETTSEEEEEEECSSSCC---EEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTS
T ss_pred cCCCCEEEEeeCCCeEEEEECCCCCCc---ceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccccc
Confidence 445678999999999999998654311 2344567789999999999 2 789999999999999999876
Q ss_pred ----cceehhcCCCCceEEEEEcCC--CCEEEEecCCCcEEEEeCcCCee------------------------------
Q psy16373 75 ----QLLFTLHGHCGPITTLFIDGV--SMMSGSGSQDGLLCVWDTVTGAC------------------------------ 118 (166)
Q Consensus 75 ----~~~~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~~~------------------------------ 118 (166)
+.+..+..|...|.+++|+|+ +.++++++.|+.+++||+++++.
T Consensus 97 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (351)
T 3f3f_A 97 GRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWC 176 (351)
T ss_dssp SCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEEC
T ss_pred ccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEec
Confidence 456777889999999999999 99999999999999999875431
Q ss_pred ------------------------------eEEeecccccEEEEEEcCC------eEEEeecCCcEEEEECCcc
Q psy16373 119 ------------------------------MYSIQAHDGCIHALTYSDS------YVISLGQDERLCVWDRFQG 156 (166)
Q Consensus 119 ------------------------------~~~~~~~~~~v~~i~~~~~------~l~~~~~d~~i~~wd~~~~ 156 (166)
+..+.+|...|++++|+|+ ++++++.|+.|++||++++
T Consensus 177 p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 177 PSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEK 250 (351)
T ss_dssp CCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEEC
T ss_pred cCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCC
Confidence 3445578889999999985 6999999999999999875
No 54
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.93 E-value=8.1e-24 Score=144.84 Aligned_cols=149 Identities=15% Similarity=0.157 Sum_probs=127.0
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeeeec-cCCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRA-HHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH 83 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~ 83 (166)
.+..+++++.++.+.+|+.. .....+.. |...+.++++ ....+++++.|+.|++||+++++.+..+..|
T Consensus 154 ~~~~l~~~~~d~~i~i~d~~---------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~ 224 (313)
T 3odt_A 154 SENKFLTASADKTIKLWQND---------KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGH 224 (313)
T ss_dssp TTTEEEEEETTSCEEEEETT---------EEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred CCCEEEEEECCCCEEEEecC---------ceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcC
Confidence 45678899999999999832 12234444 8889999999 4445999999999999999999999999999
Q ss_pred CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC-CeEEEeecCCcEEEEECCcccceeee
Q psy16373 84 CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD-SYVISLGQDERLCVWDRFQGHLLSTI 162 (166)
Q Consensus 84 ~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~ 162 (166)
...|.+++|+|++ .+++++.|+.|++||+++++.+..+..|..+|.+++|+| +.+++++.|+.|++||+++++.+...
T Consensus 225 ~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 225 ESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSDNLVRIFSQEKSRWASED 303 (313)
T ss_dssp SSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETTSCEEEEESCGGGCCC--
T ss_pred CceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCCCcEEEEeCCCCceeehh
Confidence 9999999999998 588999999999999999999999999999999999998 46888999999999999998877665
Q ss_pred ee
Q psy16373 163 QL 164 (166)
Q Consensus 163 ~~ 164 (166)
..
T Consensus 304 ~~ 305 (313)
T 3odt_A 304 EI 305 (313)
T ss_dssp --
T ss_pred hh
Confidence 54
No 55
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.93 E-value=4.7e-25 Score=154.98 Aligned_cols=154 Identities=14% Similarity=0.109 Sum_probs=121.8
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccc---ceeh
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ---LLFT 79 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~---~~~~ 79 (166)
..+..|++++.|+.+++|+..... .......+.+|...|.+++| ++++|++++.|+.|++||+++++ ....
T Consensus 65 ~~~~~l~s~s~d~~v~vwd~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~ 140 (377)
T 3dwl_C 65 PKSNRIVTCSQDRNAYVYEKRPDG----TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKH 140 (377)
T ss_dssp TTTCCEEEEETTSSEEEC----------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEE
T ss_pred CCCCEEEEEeCCCeEEEEEcCCCC----ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeE
Confidence 345689999999999999986543 11233456689999999999 78899999999999999999876 3666
Q ss_pred hcC-CCCceEEEEEcCCCCEEEEecCCCcEEEEeCc------------------CCeeeEEeecccccEEEEEEcC--Ce
Q psy16373 80 LHG-HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV------------------TGACMYSIQAHDGCIHALTYSD--SY 138 (166)
Q Consensus 80 ~~~-~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~------------------~~~~~~~~~~~~~~v~~i~~~~--~~ 138 (166)
+.. |...|.+++|+|++.++++++.|+.+++||++ .++++..+ .|...|.+++|+| .+
T Consensus 141 ~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~ 219 (377)
T 3dwl_C 141 LKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNA 219 (377)
T ss_dssp ECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSC
T ss_pred eecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCE
Confidence 777 99999999999999999999999999999985 34556666 8899999999998 48
Q ss_pred EEEeecCCcEEEEECCcccc----eeeee
Q psy16373 139 VISLGQDERLCVWDRFQGHL----LSTIQ 163 (166)
Q Consensus 139 l~~~~~d~~i~~wd~~~~~~----~~~~~ 163 (166)
|++++.|+.|++||+++++. +..+.
T Consensus 220 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~ 248 (377)
T 3dwl_C 220 LAYAGHDSSVTIAYPSAPEQPPRALITVK 248 (377)
T ss_dssp EEEEETTTEEC-CEECSTTSCEEECCCEE
T ss_pred EEEEeCCCcEEEEECCCCCCcceeeEeec
Confidence 99999999999999999887 55544
No 56
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.93 E-value=7.5e-24 Score=147.73 Aligned_cols=152 Identities=13% Similarity=0.151 Sum_probs=124.8
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c----CcEEEEEecCCeEEEEEcccccceehh
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V----SNRVITGSQDHTLKVYKLEDQQLLFTL 80 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~----~~~l~~~~~d~~v~v~~~~~~~~~~~~ 80 (166)
...+++++.+ .+.+|+........ .........|...|.+++| + +.+|++|+.|+.|++||+.+++.+..+
T Consensus 35 ~~~~~~~~~~-~v~vw~~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~ 111 (366)
T 3k26_A 35 PLVFATVGSN-RVTLYECHSQGEIR--LLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHY 111 (366)
T ss_dssp CEEEEEEETT-EEEEEEECGGGCEE--EEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEE
T ss_pred ceEEEECCCC-EEEEEEcCCCcEEE--eeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeee
Confidence 3455555555 88888876543211 1111122246788999999 4 568999999999999999999999999
Q ss_pred cCCCCceEEEEEcC-CCCEEEEecCCCcEEEEeCcCCeeeEEe---ecccccEEEEEEcC--CeEEEeecCCcEEEEECC
Q psy16373 81 HGHCGPITTLFIDG-VSMMSGSGSQDGLLCVWDTVTGACMYSI---QAHDGCIHALTYSD--SYVISLGQDERLCVWDRF 154 (166)
Q Consensus 81 ~~~~~~v~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~~~~~~~---~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~ 154 (166)
.+|...|.+++|+| ++..+++++.||.|++||+++++.+..+ ..|...|.+++|+| +.+++++.|+.|++||++
T Consensus 112 ~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~ 191 (366)
T 3k26_A 112 VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRIN 191 (366)
T ss_dssp ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESC
T ss_pred cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECC
Confidence 99999999999999 8999999999999999999999998888 67999999999998 589999999999999999
Q ss_pred cccceee
Q psy16373 155 QGHLLST 161 (166)
Q Consensus 155 ~~~~~~~ 161 (166)
+++.+..
T Consensus 192 ~~~~~~~ 198 (366)
T 3k26_A 192 SKRMMNA 198 (366)
T ss_dssp SHHHHHH
T ss_pred CCccccc
Confidence 8776543
No 57
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.93 E-value=5.2e-25 Score=154.78 Aligned_cols=147 Identities=16% Similarity=0.131 Sum_probs=119.2
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccc---cee
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ---LLF 78 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~---~~~ 78 (166)
+..+..+++|+.++.+++|+..... ......+.+|..+|.+++| ++++|++++.|+.|++||+.+++ ...
T Consensus 20 s~~g~~l~~~~~d~~i~iw~~~~~~-----~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~ 94 (377)
T 3dwl_C 20 NSQRTEFVTTTATNQVELYEQDGNG-----WKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTL 94 (377)
T ss_dssp CSSSSEEECCCSSSCBCEEEEETTE-----EEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEE
T ss_pred CCCCCEEEEecCCCEEEEEEccCCc-----eEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeee
Confidence 4456789999999999999986432 1344567789999999999 77899999999999999999877 566
Q ss_pred hhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe---eeEEeec-ccccEEEEEEcC--CeEEEeecCCcEEEEE
Q psy16373 79 TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA---CMYSIQA-HDGCIHALTYSD--SYVISLGQDERLCVWD 152 (166)
Q Consensus 79 ~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~---~~~~~~~-~~~~v~~i~~~~--~~l~~~~~d~~i~~wd 152 (166)
.+..|...|.+++|+|++..+++++.|+.+++||+++++ ....+.. |...|.+++|+| .++++++.|+.|++||
T Consensus 95 ~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd 174 (377)
T 3dwl_C 95 VLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLS 174 (377)
T ss_dssp ECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEE
T ss_pred EecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEE
Confidence 777899999999999999999999999999999999876 4677777 999999999998 4899999999999999
Q ss_pred CCc
Q psy16373 153 RFQ 155 (166)
Q Consensus 153 ~~~ 155 (166)
+++
T Consensus 175 ~~~ 177 (377)
T 3dwl_C 175 AYV 177 (377)
T ss_dssp ECC
T ss_pred EEe
Confidence 853
No 58
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=4.9e-25 Score=161.40 Aligned_cols=142 Identities=11% Similarity=0.026 Sum_probs=122.6
Q ss_pred EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEE--Ee--cC-cEEEEEecCCeEEEEEcccccceehhcC
Q psy16373 8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVL--EC--VS-NRVITGSQDHTLKVYKLEDQQLLFTLHG 82 (166)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--~~--~~-~~l~~~~~d~~v~v~~~~~~~~~~~~~~ 82 (166)
..|++|+.|+.+++|+..... .+...+.+|..+|.++ .+ ++ .+|++|+.|++|++||+++++....+.+
T Consensus 278 ~~lasgs~DgtV~lWD~~~~~------~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~ 351 (524)
T 2j04_B 278 TTVVCGFKNGFVAEFDLTDPE------VPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVS 351 (524)
T ss_dssp SEEEEEETTSEEEEEETTBCS------SCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEE
T ss_pred CeEEEEeCCCEEEEEECCCCC------CceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccc
Confidence 479999999999999986432 1233567899999999 45 45 7899999999999999999887777766
Q ss_pred CCC--ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373 83 HCG--PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQ 155 (166)
Q Consensus 83 ~~~--~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~ 155 (166)
|.. .|.+++|+|++..+++++.|++|++||++++.++..+.+|.+.|++++|+| ..|++|+.|++|++||+..
T Consensus 352 ~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 352 RFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp ECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred ccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 653 478999999999999999999999999999988888999999999999999 4899999999999999754
No 59
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=8.9e-24 Score=148.00 Aligned_cols=151 Identities=14% Similarity=0.156 Sum_probs=128.8
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c--CcEEEEEecCCeEEEEEccccc--ce
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V--SNRVITGSQDHTLKVYKLEDQQ--LL 77 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~--~~~l~~~~~d~~v~v~~~~~~~--~~ 77 (166)
+..+..+++|+.++.+++|+..... ......+.+|..+|.+++| + +++|++++.|+.|++||+.+++ .+
T Consensus 20 s~~~~~l~~~~~dg~i~iw~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 94 (379)
T 3jrp_A 20 DYYGKRLATCSSDKTIKIFEVEGET-----HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQI 94 (379)
T ss_dssp CSSSSEEEEEETTSCEEEEEEETTE-----EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEE
T ss_pred cCCCCEEEEEECCCcEEEEecCCCc-----ceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEe
Confidence 4456789999999999999986322 2344567789999999999 3 7899999999999999999886 66
Q ss_pred ehhcCCCCceEEEEEcCC--CCEEEEecCCCcEEEEeCcCCe--eeEEeecccccEEEEEEcC---------------Ce
Q psy16373 78 FTLHGHCGPITTLFIDGV--SMMSGSGSQDGLLCVWDTVTGA--CMYSIQAHDGCIHALTYSD---------------SY 138 (166)
Q Consensus 78 ~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~v~~i~~~~---------------~~ 138 (166)
..+..|...|.+++|+|+ +..+++++.|+.+++||+++.. ....+..|...|.+++|+| ..
T Consensus 95 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 174 (379)
T 3jrp_A 95 AVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK 174 (379)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCE
T ss_pred eeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCE
Confidence 777889999999999999 9999999999999999998773 4445678899999999987 38
Q ss_pred EEEeecCCcEEEEECCcccce
Q psy16373 139 VISLGQDERLCVWDRFQGHLL 159 (166)
Q Consensus 139 l~~~~~d~~i~~wd~~~~~~~ 159 (166)
+++++.|+.|++||++++...
T Consensus 175 l~~~~~dg~i~i~d~~~~~~~ 195 (379)
T 3jrp_A 175 FVTGGADNLVKIWKYNSDAQT 195 (379)
T ss_dssp EEEEETTSCEEEEEEETTTTE
T ss_pred EEEEeCCCeEEEEEecCCCcc
Confidence 999999999999999877643
No 60
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=6e-24 Score=148.12 Aligned_cols=120 Identities=13% Similarity=0.108 Sum_probs=103.7
Q ss_pred ccCCceEEEEe----cCcEEEEEecCCeEEEEEcccccceehhc-CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC
Q psy16373 42 AHHQPITVLEC----VSNRVITGSQDHTLKVYKLEDQQLLFTLH-GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG 116 (166)
Q Consensus 42 ~~~~~i~~~~~----~~~~l~~~~~d~~v~v~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 116 (166)
+|..+|.++++ +++++++++.|+.|++||+++++...... .+...+.+++|+|++.++++|+.||.|++||++++
T Consensus 123 ~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~ 202 (343)
T 3lrv_A 123 DSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP 202 (343)
T ss_dssp CCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCT
T ss_pred CCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 56688999999 46789999999999999999988866553 35568999999999999999999999999999999
Q ss_pred eee-EEeec-ccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeee
Q psy16373 117 ACM-YSIQA-HDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTI 162 (166)
Q Consensus 117 ~~~-~~~~~-~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~ 162 (166)
+.+ ..+.. |.++|++++|+| .+|++++ |+.|++||+++++.+..+
T Consensus 203 ~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~ 251 (343)
T 3lrv_A 203 DQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAY 251 (343)
T ss_dssp TSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSS
T ss_pred CCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceee
Confidence 877 77887 999999999998 3788888 559999999998876543
No 61
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.93 E-value=3.7e-23 Score=143.14 Aligned_cols=156 Identities=19% Similarity=0.202 Sum_probs=129.0
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccc--------
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQL-------- 76 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~-------- 76 (166)
+.+|++|+.|+.+++|+....+. ....+...+.+|..+|.+++| ++++|++++.|+.|++|+......
T Consensus 51 ~~~l~S~s~D~~i~vWd~~~~~~--~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~ 128 (340)
T 4aow_A 51 PDMILSASRDKTIIMWKLTRDET--NYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHT 128 (340)
T ss_dssp TTEEEEEETTSCEEEEEECCSSS--CSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred CCEEEEEcCCCeEEEEECCCCCc--ccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCC
Confidence 46899999999999999865442 223345677899999999999 788999999999999998863211
Q ss_pred -----------------------------------eehhcCCCCceEEEEEcCC--CCEEEEecCCCcEEEEeCcCCeee
Q psy16373 77 -----------------------------------LFTLHGHCGPITTLFIDGV--SMMSGSGSQDGLLCVWDTVTGACM 119 (166)
Q Consensus 77 -----------------------------------~~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~~~~ 119 (166)
.....+|...+..++++++ ...+++++.|+.+++||+++++.+
T Consensus 129 ~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~ 208 (340)
T 4aow_A 129 KDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLK 208 (340)
T ss_dssp SCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEE
T ss_pred CceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCcee
Confidence 1123457778899999876 457889999999999999999999
Q ss_pred EEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373 120 YSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 120 ~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
..+.+|..+|++++|+| .+|++++.|+.|++||+++++++..+..
T Consensus 209 ~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~ 255 (340)
T 4aow_A 209 TNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG 255 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC
Confidence 99999999999999998 4899999999999999999988877654
No 62
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.93 E-value=1.7e-23 Score=150.35 Aligned_cols=149 Identities=26% Similarity=0.402 Sum_probs=132.7
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCCc
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGP 86 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~ 86 (166)
+..+++|+.|+.+++|+....+ ....+.+|...|.++.++++.+++|+.|+.|++||+.+++.+..+.+|...
T Consensus 169 ~~~l~s~~~dg~i~vwd~~~~~-------~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~ 241 (445)
T 2ovr_B 169 DNIIISGSTDRTLKVWNAETGE-------CIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAA 241 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSC
T ss_pred CCEEEEEeCCCeEEEEECCcCc-------EEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCccc
Confidence 4578999999999999976542 344667899999999998899999999999999999999998889999999
Q ss_pred eEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373 87 ITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 87 v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
|.++++ ++..+++++.|+.+++||+++++.+..+.+|...|.++.|++..+++++.|+.|++||+++++.+.++..
T Consensus 242 v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 317 (445)
T 2ovr_B 242 VRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTG 317 (445)
T ss_dssp EEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred EEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcC
Confidence 999998 6788999999999999999999999999999999999999888999999999999999999988876653
No 63
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.92 E-value=3.2e-23 Score=146.11 Aligned_cols=151 Identities=13% Similarity=0.165 Sum_probs=127.8
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH 83 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~ 83 (166)
.+..+++++.|+.+++|+..... ........+|...|.+++| ++++|++++.|+.|++||+ +++.+..+.+|
T Consensus 130 ~~~~l~s~~~d~~i~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h 203 (383)
T 3ei3_B 130 NTNQLFVSSIRGATTLRDFSGSV-----IQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLH 203 (383)
T ss_dssp EEEEEEEEETTTEEEEEETTSCE-----EEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECS
T ss_pred CCCEEEEEeCCCEEEEEECCCCc-----eEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccC
Confidence 45789999999999999987321 1112222345688999999 7899999999999999999 57778888899
Q ss_pred CCceEEEEEcCCCC-EEEEecCCCcEEEEeCcC----CeeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCc
Q psy16373 84 CGPITTLFIDGVSM-MSGSGSQDGLLCVWDTVT----GACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQ 155 (166)
Q Consensus 84 ~~~v~~~~~~~~~~-~~~~~~~d~~v~~~d~~~----~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~ 155 (166)
...|.+++|+|++. .+++++.|+.|++||+++ +..+..+ +|...|.+++|+| .++++++.|+.|++||+++
T Consensus 204 ~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~ 282 (383)
T 3ei3_B 204 KAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYD 282 (383)
T ss_dssp SSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTB
T ss_pred CCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCC
Confidence 99999999999988 999999999999999998 5566666 6899999999998 4899999999999999999
Q ss_pred ccceeeee
Q psy16373 156 GHLLSTIQ 163 (166)
Q Consensus 156 ~~~~~~~~ 163 (166)
++.+..+.
T Consensus 283 ~~~~~~~~ 290 (383)
T 3ei3_B 283 WSKPDQII 290 (383)
T ss_dssp TTSCSEEE
T ss_pred Cccccccc
Confidence 88876665
No 64
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.92 E-value=3.4e-24 Score=149.50 Aligned_cols=145 Identities=15% Similarity=0.238 Sum_probs=126.3
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehh---
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTL--- 80 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~--- 80 (166)
+..+++|+.++.+++|+....+ ....+.+|..+|.+++| ++++|++++.|+.|++||+++++.+..+
T Consensus 85 ~~~l~~~~~dg~i~v~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 157 (366)
T 3k26_A 85 HPLLAVAGSRGIIRIINPITMQ-------CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGV 157 (366)
T ss_dssp CEEEEEEETTCEEEEECTTTCC-------EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECST
T ss_pred CCEEEEecCCCEEEEEEchhce-------EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccc
Confidence 5689999999999999976433 34456789999999999 5689999999999999999999888777
Q ss_pred cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee----------------------------cccccEEEE
Q psy16373 81 HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ----------------------------AHDGCIHAL 132 (166)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~----------------------------~~~~~v~~i 132 (166)
..|...|.+++|+|++..+++++.|+.+++||+++++....+. .|...|.++
T Consensus 158 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 237 (366)
T 3k26_A 158 EGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCV 237 (366)
T ss_dssp TSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEE
T ss_pred ccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEE
Confidence 6899999999999999999999999999999998776544333 388999999
Q ss_pred EEcCCeEEEeecCCcEEEEECCcccc
Q psy16373 133 TYSDSYVISLGQDERLCVWDRFQGHL 158 (166)
Q Consensus 133 ~~~~~~l~~~~~d~~i~~wd~~~~~~ 158 (166)
+|+++++++++.|+.|++||+++++.
T Consensus 238 ~~~~~~l~~~~~d~~i~~wd~~~~~~ 263 (366)
T 3k26_A 238 RWLGDLILSKSCENAIVCWKPGKMED 263 (366)
T ss_dssp EEETTEEEEECSSSEEEEEEESSTTC
T ss_pred EEcCCEEEEEecCCEEEEEeCCCccc
Confidence 99999999999999999999988754
No 65
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.92 E-value=2.4e-24 Score=152.87 Aligned_cols=156 Identities=12% Similarity=0.161 Sum_probs=119.5
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe----------cCcEEEEEecCCeEEEEEcccc
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC----------VSNRVITGSQDHTLKVYKLEDQ 74 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----------~~~~l~~~~~d~~v~v~~~~~~ 74 (166)
.....+++++.|+.+++|+....... .......+.+|.+.|++++| ++++|++++.|++|++||+.++
T Consensus 99 ~~~~~las~~~d~~v~lw~~~~~~~~--~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 99 VYSLFLACVCQDNTVRLIITKNETII--TQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp EEEEEEEEEETTSCEEEEEEETTEEE--EEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETT
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccc--eeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCC
Confidence 34668999999999999998655422 22334567899999999999 3578999999999999999988
Q ss_pred cceehhcCCCCceEEEEEcCCC-CEEEEecCCCcEEEEeCcCCeeeEEe-------------------------eccccc
Q psy16373 75 QLLFTLHGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMYSI-------------------------QAHDGC 128 (166)
Q Consensus 75 ~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~~~~~~~-------------------------~~~~~~ 128 (166)
.....+..|...+.+++|+|++ .++++++.|++|++||+++++..... .+|...
T Consensus 177 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 256 (393)
T 4gq1_A 177 GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS 256 (393)
T ss_dssp EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS
T ss_pred ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc
Confidence 8887788899999999999986 58999999999999999877543222 346667
Q ss_pred EEEEEEcC---CeEEEeecCCcEEEEECCcccceeee
Q psy16373 129 IHALTYSD---SYVISLGQDERLCVWDRFQGHLLSTI 162 (166)
Q Consensus 129 v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~~~~~~ 162 (166)
+.++.|.+ ..+++++.|+.+++||+.+++....+
T Consensus 257 v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l 293 (393)
T 4gq1_A 257 LANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEI 293 (393)
T ss_dssp CSEEEEETTTTCEEEEECTTSEEEEEEC---------
T ss_pred ceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceE
Confidence 88888863 48999999999999999887765544
No 66
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.92 E-value=1.3e-23 Score=154.91 Aligned_cols=150 Identities=19% Similarity=0.347 Sum_probs=130.4
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH 81 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~ 81 (166)
++.+..+++++.++.+++|+... .....+.+|...|.+++| ++.+|++++.|+.|++||. +++.+..+.
T Consensus 394 s~dg~~l~~~~~d~~v~~~~~~~--------~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~ 464 (577)
T 2ymu_A 394 SPDGQTIASASDDKTVKLWNRNG--------QLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLT 464 (577)
T ss_dssp CTTSSCEEEEETTSEEEEECTTC--------CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEE
T ss_pred CCCCCEEEEEeCCCEEEEEeCCC--------CEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEc
Confidence 34456789999999999998532 234567789999999999 7889999999999999996 467778888
Q ss_pred CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373 82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL 159 (166)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~ 159 (166)
+|...|.+++|+|++.++++++.|+.|++||. +++.+..+.+|...|++++|+| .+|++++.|+.|++||. +++.+
T Consensus 465 ~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~ 542 (577)
T 2ymu_A 465 GHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLL 542 (577)
T ss_dssp CCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEE
T ss_pred CCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEE
Confidence 99999999999999999999999999999995 7888899999999999999998 48999999999999995 67777
Q ss_pred eeeee
Q psy16373 160 STIQL 164 (166)
Q Consensus 160 ~~~~~ 164 (166)
.++..
T Consensus 543 ~~~~~ 547 (577)
T 2ymu_A 543 QTLTG 547 (577)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 77654
No 67
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.92 E-value=1.8e-23 Score=150.73 Aligned_cols=152 Identities=19% Similarity=0.251 Sum_probs=132.7
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC 84 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~ 84 (166)
.+..+++|+.|+.+++|+..... ....+.+|..+|.+++| .+..+++|+.|+.|++||+++++.+..+.+|.
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~-------~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~h~ 203 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKK-------FLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWDIKKGCCTHVFEGHN 203 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred CCCEEEEEcCCCcEEEEECCCCc-------EEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEECCCCcEEEEECCCC
Confidence 45689999999999999976443 44567799999999999 55599999999999999999999999999999
Q ss_pred CceEEEEEc--CCCCEEEEecCCCcEEEEeCcCCee-----------------------eEEeecccccEEEEEEcCCeE
Q psy16373 85 GPITTLFID--GVSMMSGSGSQDGLLCVWDTVTGAC-----------------------MYSIQAHDGCIHALTYSDSYV 139 (166)
Q Consensus 85 ~~v~~~~~~--~~~~~~~~~~~d~~v~~~d~~~~~~-----------------------~~~~~~~~~~v~~i~~~~~~l 139 (166)
..|.+++++ +++..+++++.|+.+++||++++.. +..+.+|...+.++..+++.+
T Consensus 204 ~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l 283 (464)
T 3v7d_B 204 STVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIV 283 (464)
T ss_dssp SCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEE
T ss_pred CccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEE
Confidence 999999998 5678999999999999999987652 456778889999998888999
Q ss_pred EEeecCCcEEEEECCcccceeeeee
Q psy16373 140 ISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 140 ~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
++++.|+.|++||+++++.+..+..
T Consensus 284 ~~~~~d~~i~vwd~~~~~~~~~~~~ 308 (464)
T 3v7d_B 284 VSGSYDNTLIVWDVAQMKCLYILSG 308 (464)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEeCCCeEEEEECCCCcEEEEecC
Confidence 9999999999999999988877653
No 68
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.92 E-value=1.3e-23 Score=166.41 Aligned_cols=153 Identities=20% Similarity=0.309 Sum_probs=137.7
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH 81 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~ 81 (166)
+..+..+++|+.++.+++|+..... ....+.+|...|.+++| ++++|++++.|+.|++||+.+++.+..+.
T Consensus 624 s~~~~~l~s~~~d~~i~vw~~~~~~-------~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~ 696 (1249)
T 3sfz_A 624 SQDGQRIASCGADKTLQVFKAETGE-------KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVHTYD 696 (1249)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCC-------EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCC-------EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEEEEc
Confidence 4456789999999999999986543 34467799999999999 78899999999999999999999999999
Q ss_pred CCCCceEEEEEcC--CCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373 82 GHCGPITTLFIDG--VSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 82 ~~~~~v~~~~~~~--~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~ 157 (166)
+|...|.+++|+| ++..+++++.|+.+++||+++++.+..+.+|...|++++|+| +.+++++.|+.|++||+++++
T Consensus 697 ~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~ 776 (1249)
T 3sfz_A 697 EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSAN 776 (1249)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTE
T ss_pred CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCc
Confidence 9999999999999 466899999999999999999999999999999999999998 489999999999999999988
Q ss_pred ceeeee
Q psy16373 158 LLSTIQ 163 (166)
Q Consensus 158 ~~~~~~ 163 (166)
....+.
T Consensus 777 ~~~~~~ 782 (1249)
T 3sfz_A 777 ERKSIN 782 (1249)
T ss_dssp EEEEEE
T ss_pred ccceec
Confidence 776654
No 69
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3e-23 Score=148.49 Aligned_cols=159 Identities=13% Similarity=0.205 Sum_probs=129.6
Q ss_pred cceEEEEecCCCceEEEeecccc---ccee-eceeeeeeee--c--cCCceEEEEe----cCcEEEEEecCCeEEEEEcc
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVE---EEMT-LTCCKVESTR--A--HHQPITVLEC----VSNRVITGSQDHTLKVYKLE 72 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~~--~--~~~~i~~~~~----~~~~l~~~~~d~~v~v~~~~ 72 (166)
..+..+++|+.|+.+++|+.... .... .....+..+. . +...+.++.+ ++.+|++++.|+.|++||++
T Consensus 121 ~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~ 200 (437)
T 3gre_A 121 PNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIR 200 (437)
T ss_dssp TTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETT
T ss_pred CCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCC
Confidence 34568999999999999988522 1111 0111122222 2 5667888875 58899999999999999999
Q ss_pred cccceehhcC--CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee-cccccEEEEEEcCC------eEEEee
Q psy16373 73 DQQLLFTLHG--HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ-AHDGCIHALTYSDS------YVISLG 143 (166)
Q Consensus 73 ~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~-~~~~~v~~i~~~~~------~l~~~~ 143 (166)
+++.+..+.. |...|.+++|+|++.++++++.||.|++||+++++++..+. .|..+|.+++|+|. ++++++
T Consensus 201 ~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~ 280 (437)
T 3gre_A 201 TLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGS 280 (437)
T ss_dssp TCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEES
T ss_pred CCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEc
Confidence 9999988887 88999999999999999999999999999999999999886 78889999977752 899999
Q ss_pred cCCcEEEEECCcccceeeee
Q psy16373 144 QDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 144 ~d~~i~~wd~~~~~~~~~~~ 163 (166)
.|+.|++||+++++.+..+.
T Consensus 281 ~dg~i~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 281 SKTFLTIWNFVKGHCQYAFI 300 (437)
T ss_dssp TTEEEEEEETTTTEEEEEEE
T ss_pred CCCcEEEEEcCCCcEEEEEE
Confidence 99999999999999887765
No 70
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.92 E-value=2.7e-23 Score=145.41 Aligned_cols=155 Identities=13% Similarity=0.113 Sum_probs=130.4
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccc----ee
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQL----LF 78 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~----~~ 78 (166)
..+..+++++.++.+++|+..... ......+..|...|.+++| ++++|++++.|+.|++||+...+. ..
T Consensus 62 ~~~~~l~~~~~dg~i~vwd~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~ 136 (372)
T 1k8k_C 62 PDSNRIVTCGTDRNAYVWTLKGRT-----WKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKH 136 (372)
T ss_dssp TTTTEEEEEETTSCEEEEEEETTE-----EEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCe-----eeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeee
Confidence 345678999999999999975433 1223344578899999999 788999999999999999988763 22
Q ss_pred hhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeC------------------cCCeeeEEeecccccEEEEEEcC--Ce
Q psy16373 79 TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT------------------VTGACMYSIQAHDGCIHALTYSD--SY 138 (166)
Q Consensus 79 ~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~------------------~~~~~~~~~~~~~~~v~~i~~~~--~~ 138 (166)
....|...|.+++|+|++.++++++.|+.+++||+ ..++.+..+..|...|.+++|+| ++
T Consensus 137 ~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 216 (372)
T 1k8k_C 137 IKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSR 216 (372)
T ss_dssp ECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSE
T ss_pred eecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCE
Confidence 33568899999999999999999999999999995 36788888889999999999998 49
Q ss_pred EEEeecCCcEEEEECCcccceeeeee
Q psy16373 139 VISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 139 l~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
+++++.|+.|++||+++++.+..+..
T Consensus 217 l~~~~~d~~i~i~d~~~~~~~~~~~~ 242 (372)
T 1k8k_C 217 VAWVSHDSTVCLADADKKMAVATLAS 242 (372)
T ss_dssp EEEEETTTEEEEEEGGGTTEEEEEEC
T ss_pred EEEEeCCCEEEEEECCCCceeEEEcc
Confidence 99999999999999999998877764
No 71
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.92 E-value=1.1e-23 Score=148.79 Aligned_cols=156 Identities=16% Similarity=0.222 Sum_probs=132.2
Q ss_pred cceEE-EEecCCCceEEEeeccc------ccceeeceeeeeee-------eccCCceEEEEe--cCcEEEEEecCCeEEE
Q psy16373 5 VHRIH-LRTGSAGSLLDFKKMQV------EEEMTLTCCKVEST-------RAHHQPITVLEC--VSNRVITGSQDHTLKV 68 (166)
Q Consensus 5 ~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-------~~~~~~i~~~~~--~~~~l~~~~~d~~v~v 68 (166)
..+.. +++++.++.+++|+... ..... ..+...+ ..|...|.+++| ++ .+++++.|+.|++
T Consensus 135 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i 211 (397)
T 1sq9_A 135 RLLSHRLVATDVKGTTYIWKFHPFADESNSLTLN--WSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQI 211 (397)
T ss_dssp ---CEEEEEEETTSCEEEEEEESSSSHHHHTTTC--CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEE
T ss_pred CCCceEEEEEeCCCcEEEEeCCccccccccceee--ccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEE
Confidence 34556 89999999999999876 32211 1111133 348889999999 56 9999999999999
Q ss_pred EEcccccceehhcC---C---CCceEEEEEcCCCCEEEEecCC---CcEEEEeCcCCeeeEEeec-------------cc
Q psy16373 69 YKLEDQQLLFTLHG---H---CGPITTLFIDGVSMMSGSGSQD---GLLCVWDTVTGACMYSIQA-------------HD 126 (166)
Q Consensus 69 ~~~~~~~~~~~~~~---~---~~~v~~~~~~~~~~~~~~~~~d---~~v~~~d~~~~~~~~~~~~-------------~~ 126 (166)
||+++++.+..+.. | ...|.+++|+|++.++++++.| +.|++||+++++.+..+.. |.
T Consensus 212 ~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (397)
T 1sq9_A 212 SELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHS 291 (397)
T ss_dssp EETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBS
T ss_pred EECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccC
Confidence 99999999888888 8 9999999999999999999999 9999999999999999988 99
Q ss_pred ccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeee
Q psy16373 127 GCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 127 ~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~ 163 (166)
..|.+++|+| .+|++++.|+.|++||+++++.+..+.
T Consensus 292 ~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 292 SWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred CcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 9999999998 599999999999999999999888876
No 72
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.92 E-value=3e-23 Score=148.71 Aligned_cols=147 Identities=18% Similarity=0.244 Sum_probs=124.9
Q ss_pred EEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccc---cceehhcC
Q psy16373 9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQ---QLLFTLHG 82 (166)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~---~~~~~~~~ 82 (166)
.|++|+.++.+.+|+................+.+|...|.+++| ++.+|++++.|+.|++||+++. +.+..+..
T Consensus 196 ~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~ 275 (430)
T 2xyi_A 196 YLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDA 275 (430)
T ss_dssp EEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEEC
T ss_pred eEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeec
Confidence 89999999999999987633211112234456689999999999 4678999999999999999987 56667778
Q ss_pred CCCceEEEEEcCCCC-EEEEecCCCcEEEEeCcC-CeeeEEeecccccEEEEEEcCC---eEEEeecCCcEEEEECCc
Q psy16373 83 HCGPITTLFIDGVSM-MSGSGSQDGLLCVWDTVT-GACMYSIQAHDGCIHALTYSDS---YVISLGQDERLCVWDRFQ 155 (166)
Q Consensus 83 ~~~~v~~~~~~~~~~-~~~~~~~d~~v~~~d~~~-~~~~~~~~~~~~~v~~i~~~~~---~l~~~~~d~~i~~wd~~~ 155 (166)
|...|++++|+|++. .+++++.||.|++||+++ ..++..+..|...|++++|+|+ .+++++.|+.|++||++.
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 999999999999876 688999999999999997 5778889999999999999983 699999999999999987
No 73
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.92 E-value=3e-23 Score=158.21 Aligned_cols=153 Identities=17% Similarity=0.219 Sum_probs=136.2
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH 81 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~ 81 (166)
++.+..+++|+.++.+.+|+..... ....+.+|..+|.+++| ++++|++++.|+.|++||+.+++.+..+.
T Consensus 22 sp~~~~la~~~~~g~v~iwd~~~~~-------~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~ 94 (814)
T 3mkq_A 22 HPTEPWVLTTLYSGRVEIWNYETQV-------EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFE 94 (814)
T ss_dssp CSSSSEEEEEETTSEEEEEETTTTE-------EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CCCCCEEEEEeCCCEEEEEECCCCc-------eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe
Confidence 4567789999999999999975432 34466789999999999 88899999999999999999999999999
Q ss_pred CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC-eeeEEeecccccEEEEEEcC---CeEEEeecCCcEEEEECCccc
Q psy16373 82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG-ACMYSIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~ 157 (166)
+|...|.+++|+|++..+++++.||.+++||++++ .....+.+|...|.+++|+| +.+++++.|+.|++||+++++
T Consensus 95 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~ 174 (814)
T 3mkq_A 95 AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQST 174 (814)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSS
T ss_pred cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 99999999999999999999999999999999987 67778888999999999998 389999999999999998887
Q ss_pred ceeeee
Q psy16373 158 LLSTIQ 163 (166)
Q Consensus 158 ~~~~~~ 163 (166)
....+.
T Consensus 175 ~~~~~~ 180 (814)
T 3mkq_A 175 PNFTLT 180 (814)
T ss_dssp CSEEEE
T ss_pred ceeEEe
Confidence 766654
No 74
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.92 E-value=5e-23 Score=142.47 Aligned_cols=151 Identities=18% Similarity=0.325 Sum_probs=129.3
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe----cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC----VSNRVITGSQDHTLKVYKLEDQQLLFTLH 81 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~~l~~~~~d~~v~v~~~~~~~~~~~~~ 81 (166)
....+++|+.|+.+++|+..... .......+|...+.++++ ...++++++.|+.|++||+++++.+..+.
T Consensus 139 ~~~~l~s~s~d~~~~~~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~ 212 (340)
T 4aow_A 139 DNRQIVSGSRDKTIKLWNTLGVC------KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI 212 (340)
T ss_dssp TSSCEEEEETTSCEEEECTTSCE------EEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred cCccceeecCCCeEEEEEeCCCc------eEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEec
Confidence 45578899999999999875433 223345688999999998 34578899999999999999999999999
Q ss_pred CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC-CeEEEeecCCcEEEEECCccccee
Q psy16373 82 GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD-SYVISLGQDERLCVWDRFQGHLLS 160 (166)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~~~~~ 160 (166)
+|...|.+++|+|+++++++++.|+.+++||+++.+++..+.. ...+.++.|+| ..+++++.|+.|++||++++..+.
T Consensus 213 ~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~ 291 (340)
T 4aow_A 213 GHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVD 291 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-SSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC-CceEEeeecCCCCceeeccCCCEEEEEECCCCeEEE
Confidence 9999999999999999999999999999999999999988875 56899999998 588888999999999999887766
Q ss_pred eee
Q psy16373 161 TIQ 163 (166)
Q Consensus 161 ~~~ 163 (166)
.+.
T Consensus 292 ~~~ 294 (340)
T 4aow_A 292 ELK 294 (340)
T ss_dssp EEC
T ss_pred ecc
Confidence 543
No 75
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1e-23 Score=150.93 Aligned_cols=152 Identities=14% Similarity=0.232 Sum_probs=128.8
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeeeec--cCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRA--HHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH 81 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~ 81 (166)
.+..+++|+.++.+++|+..... ....+.+ |...|.+++| ++.+|++|+.|+.|++||+++++.+..+.
T Consensus 181 ~~~~l~~~~~d~~i~iwd~~~~~-------~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 253 (437)
T 3gre_A 181 EKSLLVALTNLSRVIIFDIRTLE-------RLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWS 253 (437)
T ss_dssp SCEEEEEEETTSEEEEEETTTCC-------EEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEB
T ss_pred CCCEEEEEeCCCeEEEEeCCCCe-------eeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEe
Confidence 47789999999999999986543 2334555 8899999999 78899999999999999999998888776
Q ss_pred -CCCCceEEEEEcC----CCCEEEEecCCCcEEEEeCcCCeeeEEeec--------------------------ccccEE
Q psy16373 82 -GHCGPITTLFIDG----VSMMSGSGSQDGLLCVWDTVTGACMYSIQA--------------------------HDGCIH 130 (166)
Q Consensus 82 -~~~~~v~~~~~~~----~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~--------------------------~~~~v~ 130 (166)
.|...|.+++++| ++.++++++.|+.|++||+++++.+..+.+ |...|+
T Consensus 254 ~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~ 333 (437)
T 3gre_A 254 FGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALS 333 (437)
T ss_dssp CTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGC
T ss_pred cCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceE
Confidence 6888999996654 577999999999999999999988877764 455688
Q ss_pred EEEEcC-CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373 131 ALTYSD-SYVISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 131 ~i~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
+++|++ .+|++++.|+.|++||+++++.+..+..
T Consensus 334 ~l~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 334 TISVSNDKILLTDEATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp CEEEETTEEEEEEGGGTEEEEEETTCGGGCEEEEC
T ss_pred EEEECCceEEEecCCCCeEEEEECCCcccceEEec
Confidence 889987 4899999999999999999998877653
No 76
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.92 E-value=5e-23 Score=145.09 Aligned_cols=148 Identities=11% Similarity=0.161 Sum_probs=122.9
Q ss_pred EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhcC--
Q psy16373 8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHG-- 82 (166)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~-- 82 (166)
..+++|+.++.+++|+...... .......+|...|.+++| ++++|++++.|+.|++||+++ +.+..+..
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~ 160 (383)
T 3ei3_B 87 TTVAVGSKGGDIILWDYDVQNK-----TSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTD 160 (383)
T ss_dssp TEEEEEEBTSCEEEEETTSTTC-----EEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCC
T ss_pred CEEEEEcCCCeEEEEeCCCccc-----ceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccC
Confidence 6899999999999999875432 122233479999999999 347899999999999999986 44444443
Q ss_pred -CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC---eEEEeecCCcEEEEECCc---
Q psy16373 83 -HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS---YVISLGQDERLCVWDRFQ--- 155 (166)
Q Consensus 83 -~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~---~l~~~~~d~~i~~wd~~~--- 155 (166)
|...|.+++|+|++..+++++.|+.|++||+ +++++..+..|...|.+++|+|+ .+++++.|+.|++||+++
T Consensus 161 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 239 (383)
T 3ei3_B 161 SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKD 239 (383)
T ss_dssp CSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCS
T ss_pred CCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCc
Confidence 4478999999999999999999999999999 57788889999999999999983 899999999999999998
Q ss_pred -ccceeee
Q psy16373 156 -GHLLSTI 162 (166)
Q Consensus 156 -~~~~~~~ 162 (166)
+..+..+
T Consensus 240 ~~~~~~~~ 247 (383)
T 3ei3_B 240 KNSYIAEM 247 (383)
T ss_dssp TTCEEEEE
T ss_pred ccceEEEe
Confidence 4455444
No 77
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.91 E-value=4.3e-24 Score=147.48 Aligned_cols=144 Identities=15% Similarity=0.148 Sum_probs=121.1
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c--CcEEEEEecCCeEEEEEccccc---ceeh
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V--SNRVITGSQDHTLKVYKLEDQQ---LLFT 79 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~--~~~l~~~~~d~~v~v~~~~~~~---~~~~ 79 (166)
+..|++|+.|+.+++|+..... ......+.+|...|.+++| + +.+|++|+.|+.|++||++... ....
T Consensus 71 ~~~l~s~s~D~~v~iWd~~~~~-----~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~ 145 (316)
T 3bg1_A 71 GNILASCSYDRKVIIWREENGT-----WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKI 145 (316)
T ss_dssp SSCEEEEETTSCEEEECCSSSC-----CCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCB
T ss_pred CCEEEEEECCCEEEEEECCCCc-----ceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeee
Confidence 5689999999999999976432 1233456789999999999 3 6789999999999999998753 2455
Q ss_pred hcCCCCceEEEEEcCC-----------------CCEEEEecCCCcEEEEeCcCC---eeeEEeecccccEEEEEEcCC--
Q psy16373 80 LHGHCGPITTLFIDGV-----------------SMMSGSGSQDGLLCVWDTVTG---ACMYSIQAHDGCIHALTYSDS-- 137 (166)
Q Consensus 80 ~~~~~~~v~~~~~~~~-----------------~~~~~~~~~d~~v~~~d~~~~---~~~~~~~~~~~~v~~i~~~~~-- 137 (166)
+.+|...|.+++|+|+ +.++++++.|+.|++||++.. +++..+.+|...|.+++|+|+
T Consensus 146 ~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~ 225 (316)
T 3bg1_A 146 NNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIG 225 (316)
T ss_dssp TTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSS
T ss_pred eccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCC
Confidence 6789999999999987 368999999999999999755 466778899999999999983
Q ss_pred ----eEEEeecCCcEEEEECCc
Q psy16373 138 ----YVISLGQDERLCVWDRFQ 155 (166)
Q Consensus 138 ----~l~~~~~d~~i~~wd~~~ 155 (166)
.|++++.|+.|++||+.+
T Consensus 226 ~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 226 LPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CSCCEEEEEETTCEEEEEECSS
T ss_pred CCCceEEEEcCCCeEEEEEccC
Confidence 699999999999999876
No 78
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.91 E-value=9.4e-23 Score=139.54 Aligned_cols=148 Identities=22% Similarity=0.310 Sum_probs=128.1
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHG 82 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~ 82 (166)
.+..+++++.++.+.+|+. ......+..|..++.++.+ +++.+++++.|+.|++||. .+....+..
T Consensus 113 ~~~~l~~~~~d~~i~~~d~---------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~ 181 (313)
T 3odt_A 113 QDGVVISGSWDKTAKVWKE---------GSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSG 181 (313)
T ss_dssp ETTEEEEEETTSEEEEEET---------TEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEEEEECS
T ss_pred cCCEEEEEeCCCCEEEEcC---------CcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--CceEEEEec
Confidence 3457899999999999982 1234456789999999998 6889999999999999994 445555665
Q ss_pred -CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC-eEEEeecCCcEEEEECCccccee
Q psy16373 83 -HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS-YVISLGQDERLCVWDRFQGHLLS 160 (166)
Q Consensus 83 -~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~-~l~~~~~d~~i~~wd~~~~~~~~ 160 (166)
|...+.+++++|++. +++++.|+.+++||+++++++..+..|...|++++|+|+ .+++++.|+.|++||+++++.+.
T Consensus 182 ~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~ 260 (313)
T 3odt_A 182 IHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQ 260 (313)
T ss_dssp SCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEE
T ss_pred cCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeE
Confidence 889999999999988 889999999999999999999999999999999999994 89999999999999999999888
Q ss_pred eeeec
Q psy16373 161 TIQLQ 165 (166)
Q Consensus 161 ~~~~~ 165 (166)
.+..+
T Consensus 261 ~~~~~ 265 (313)
T 3odt_A 261 VITLP 265 (313)
T ss_dssp EEECS
T ss_pred EEecc
Confidence 77643
No 79
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.91 E-value=1.2e-22 Score=141.63 Aligned_cols=105 Identities=23% Similarity=0.252 Sum_probs=90.0
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC 84 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~ 84 (166)
+..+++|+.++.+++|+...... .....+.+|..+|.+++| ++++|++++.|+.|++||+.+++... +..|.
T Consensus 54 g~~l~~~~~dg~i~iw~~~~~~~-----~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~ 127 (368)
T 3mmy_A 54 GNFLIAGSWANDVRCWEVQDSGQ-----TIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ-IAQHD 127 (368)
T ss_dssp SEEEEEEETTSEEEEEEECTTSC-----EEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EEECS
T ss_pred ceEEEEECCCCcEEEEEcCCCCc-----eeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee-ecccc
Confidence 47899999999999999865221 222456789999999999 78899999999999999999887765 55699
Q ss_pred CceEEEEE--cCCCCEEEEecCCCcEEEEeCcCCe
Q psy16373 85 GPITTLFI--DGVSMMSGSGSQDGLLCVWDTVTGA 117 (166)
Q Consensus 85 ~~v~~~~~--~~~~~~~~~~~~d~~v~~~d~~~~~ 117 (166)
..|.+++| +|++.++++++.|+.+++||+++++
T Consensus 128 ~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 128 APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 99999999 8899999999999999999987664
No 80
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.91 E-value=3.4e-23 Score=148.30 Aligned_cols=154 Identities=14% Similarity=0.157 Sum_probs=122.7
Q ss_pred ccceEEEEecCCCceEEEeecccccc----eeeceeeeeeeeccC------------CceEEEEe--cC--cEEEEEecC
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEE----MTLTCCKVESTRAHH------------QPITVLEC--VS--NRVITGSQD 63 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~------------~~i~~~~~--~~--~~l~~~~~d 63 (166)
+..+.+|++|+.|+.+++|+...... ..........+.+|. .+|.+++| ++ ..|++++.|
T Consensus 37 s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d 116 (447)
T 3dw8_B 37 NHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTND 116 (447)
T ss_dssp CSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECS
T ss_pred CCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCC
Confidence 44567899999999999999865431 111223455677898 88999999 44 689999999
Q ss_pred CeEEEEEcccccce---------------------------------------eh-hcCCCCceEEEEEcCCCCEEEEec
Q psy16373 64 HTLKVYKLEDQQLL---------------------------------------FT-LHGHCGPITTLFIDGVSMMSGSGS 103 (166)
Q Consensus 64 ~~v~v~~~~~~~~~---------------------------------------~~-~~~~~~~v~~~~~~~~~~~~~~~~ 103 (166)
+.|++||+.+++.. .. ..+|...|.+++|+|++.+++++
T Consensus 117 ~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~- 195 (447)
T 3dw8_B 117 KTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA- 195 (447)
T ss_dssp SCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-
T ss_pred CeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-
Confidence 99999999875431 11 35799999999999999999998
Q ss_pred CCCcEEEEeCcCC-eeeE-------EeecccccEEEEEEcC---CeEEEeecCCcEEEEECCcccc
Q psy16373 104 QDGLLCVWDTVTG-ACMY-------SIQAHDGCIHALTYSD---SYVISLGQDERLCVWDRFQGHL 158 (166)
Q Consensus 104 ~d~~v~~~d~~~~-~~~~-------~~~~~~~~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~~ 158 (166)
.|+.|++||+++. +.+. .+.+|...|.+++|+| ..+++++.|+.|++||+++++.
T Consensus 196 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 196 DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 7999999999844 4444 2557889999999998 4799999999999999999886
No 81
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.91 E-value=5e-23 Score=148.22 Aligned_cols=152 Identities=12% Similarity=0.150 Sum_probs=129.0
Q ss_pred ceEE-EEecCCCceEEEeecc--cccceeeceeeeeeee--ccCCceEEEEe--cCcEEEEEecCCeEEEEEccccccee
Q psy16373 6 HRIH-LRTGSAGSLLDFKKMQ--VEEEMTLTCCKVESTR--AHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF 78 (166)
Q Consensus 6 ~~~~-~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~ 78 (166)
.+.. +++|+.++.+++|+.. ... ....+. .|...|.+++| ++.+|++++.++.+++|++.+++...
T Consensus 113 d~~~l~~~~~~dg~v~iwd~~~~~~~-------~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~ 185 (450)
T 2vdu_B 113 DESRLIACADSDKSLLVFDVDKTSKN-------VLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEK 185 (450)
T ss_dssp TSSEEEEEEGGGTEEEEEEECSSSSS-------CEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSS
T ss_pred CCCEEEEEECCCCeEEEEECcCCCCc-------eeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCccccc
Confidence 3444 5899999999999986 322 122232 56788999999 78899999999999999998876554
Q ss_pred ----hhcCCCCceEEEEEcCC---CCEEEEecCCCcEEEEeCcCCeeeEE-eecccccEEEEEEc-CCeEEEeecCCcEE
Q psy16373 79 ----TLHGHCGPITTLFIDGV---SMMSGSGSQDGLLCVWDTVTGACMYS-IQAHDGCIHALTYS-DSYVISLGQDERLC 149 (166)
Q Consensus 79 ----~~~~~~~~v~~~~~~~~---~~~~~~~~~d~~v~~~d~~~~~~~~~-~~~~~~~v~~i~~~-~~~l~~~~~d~~i~ 149 (166)
.+.+|...|.+++|+|+ +.++++++.|+.|++||+++++.+.. +.+|...|.+++|+ ..+|++++.|+.|+
T Consensus 186 ~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~~~l~s~~~d~~v~ 265 (450)
T 2vdu_B 186 FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDYLLLSAGGDDKIF 265 (450)
T ss_dssp CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEECSTTEEEEEESSSEEE
T ss_pred ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEECCCCEEEEEeCCCeEE
Confidence 77889999999999999 99999999999999999999988877 56899999999997 35999999999999
Q ss_pred EEECCcccceeeeee
Q psy16373 150 VWDRFQGHLLSTIQL 164 (166)
Q Consensus 150 ~wd~~~~~~~~~~~~ 164 (166)
+||+++++.+..+..
T Consensus 266 vwd~~~~~~~~~~~~ 280 (450)
T 2vdu_B 266 AWDWKTGKNLSTFDY 280 (450)
T ss_dssp EEETTTCCEEEEEEC
T ss_pred EEECCCCcEeeeecc
Confidence 999999998887763
No 82
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.91 E-value=2.5e-22 Score=138.58 Aligned_cols=149 Identities=15% Similarity=0.154 Sum_probs=129.7
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG 82 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~ 82 (166)
..+..+++++.++.+.+|+..... ......+..|...|.+++| +++++++++.|+.|++||+++++.+..+..
T Consensus 107 ~~~~~l~~~~~d~~i~~~d~~~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~ 181 (337)
T 1gxr_A 107 PDGCTLIVGGEASTLSIWDLAAPT-----PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQG 181 (337)
T ss_dssp TTSSEEEEEESSSEEEEEECCCC-------EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred CCCCEEEEEcCCCcEEEEECCCCC-----cceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeec
Confidence 345678899999999999986543 1234456788999999999 788999999999999999999999999999
Q ss_pred CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373 83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL 159 (166)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~ 159 (166)
|...+.+++|+|++..+++++.|+.+++||+++++.+..+. +...+.+++|+| ..+++++.|+.|++||+++++..
T Consensus 182 ~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~ 259 (337)
T 1gxr_A 182 HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY 259 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE
T ss_pred ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE
Confidence 99999999999999999999999999999999998888775 678899999998 48999999999999999887654
No 83
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.91 E-value=1.7e-22 Score=144.81 Aligned_cols=157 Identities=17% Similarity=0.219 Sum_probs=128.8
Q ss_pred eEEEEecCCCceEEEeeccccccee---eceeeeeeeeccCCceEEEEe--cCc-EEEEEecCCeEEEEEcccccc----
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMT---LTCCKVESTRAHHQPITVLEC--VSN-RVITGSQDHTLKVYKLEDQQL---- 76 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~--~~~-~l~~~~~d~~v~v~~~~~~~~---- 76 (166)
+.++++++.++.+.+|+........ ........+.+|...|.+++| ++. +|++|+.||.|++|++.++..
T Consensus 141 ~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 220 (430)
T 2xyi_A 141 ACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRV 220 (430)
T ss_dssp EEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGE
T ss_pred CcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCce
Confidence 6789999999999999986531111 113455677899999999999 445 999999999999999987322
Q ss_pred ---eehhcCCCCceEEEEEcC-CCCEEEEecCCCcEEEEeCcCC---eeeEEeecccccEEEEEEcCC---eEEEeecCC
Q psy16373 77 ---LFTLHGHCGPITTLFIDG-VSMMSGSGSQDGLLCVWDTVTG---ACMYSIQAHDGCIHALTYSDS---YVISLGQDE 146 (166)
Q Consensus 77 ---~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~---~~~~~~~~~~~~v~~i~~~~~---~l~~~~~d~ 146 (166)
...+.+|...|.+++|+| ++..+++++.|+.|++||++++ +++..+..|...|++++|+|+ .+++++.|+
T Consensus 221 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg 300 (430)
T 2xyi_A 221 IDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK 300 (430)
T ss_dssp EECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS
T ss_pred eccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC
Confidence 345668999999999999 6889999999999999999977 577788889999999999982 688999999
Q ss_pred cEEEEECCc-ccceeeee
Q psy16373 147 RLCVWDRFQ-GHLLSTIQ 163 (166)
Q Consensus 147 ~i~~wd~~~-~~~~~~~~ 163 (166)
.|++||+++ ..++..+.
T Consensus 301 ~v~vwd~~~~~~~~~~~~ 318 (430)
T 2xyi_A 301 TVALWDLRNLKLKLHSFE 318 (430)
T ss_dssp EEEEEETTCTTSCSEEEE
T ss_pred eEEEEeCCCCCCCeEEee
Confidence 999999998 45566654
No 84
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.5e-22 Score=140.06 Aligned_cols=152 Identities=18% Similarity=0.185 Sum_probs=125.5
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH 81 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~ 81 (166)
+..+..+++|+.++.+++|+..... ....+.+|...|.+++| ++++|++++.|+.|++||+.+++.+..+.
T Consensus 41 s~~~~~l~~~~~dg~i~vwd~~~~~-------~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 113 (369)
T 3zwl_B 41 NKEGDLLFSCSKDSSASVWYSLNGE-------RLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWK 113 (369)
T ss_dssp CTTSCEEEEEESSSCEEEEETTTCC-------EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEE
T ss_pred cCCCCEEEEEeCCCEEEEEeCCCch-------hhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEee
Confidence 4456789999999999999875432 34466789999999999 78899999999999999998765544332
Q ss_pred CCCC------------------------------------------------------------ceEEEEEcCCCCEEEE
Q psy16373 82 GHCG------------------------------------------------------------PITTLFIDGVSMMSGS 101 (166)
Q Consensus 82 ~~~~------------------------------------------------------------~v~~~~~~~~~~~~~~ 101 (166)
+.. .+.+++|+|++..+++
T Consensus 114 -~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 192 (369)
T 3zwl_B 114 -SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIA 192 (369)
T ss_dssp -CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEE
T ss_pred -cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEE
Confidence 222 5677777777788888
Q ss_pred ecCCCcEEEEeCcC-CeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeee
Q psy16373 102 GSQDGLLCVWDTVT-GACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 102 ~~~d~~v~~~d~~~-~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~ 163 (166)
++.||.|++||+++ .+.+..+..|...|.+++|+| .+|++++.|+.|++||+++++.+..+.
T Consensus 193 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 193 GHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec
Confidence 88889999999988 688888888999999999998 489999999999999999998887765
No 85
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=3.2e-22 Score=140.10 Aligned_cols=146 Identities=14% Similarity=0.228 Sum_probs=124.2
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c--CcEEEEEecCCeEEEEEccccc--ceehh
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V--SNRVITGSQDHTLKVYKLEDQQ--LLFTL 80 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~--~~~l~~~~~d~~v~v~~~~~~~--~~~~~ 80 (166)
+..+++|+.|+.+++|+..... ......+.+|...|.+++| + +.+|++++.|+.|++||+.+.. ....+
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~ 143 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGR-----WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII 143 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTE-----EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEE
T ss_pred CCEEEEeccCCEEEEEEcCCCc-----eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEe
Confidence 6789999999999999976543 1234456689999999999 4 7899999999999999998873 33456
Q ss_pred cCCCCceEEEEEcC-------------CCCEEEEecCCCcEEEEeCcCCe----eeEEeecccccEEEEEEcCC-----e
Q psy16373 81 HGHCGPITTLFIDG-------------VSMMSGSGSQDGLLCVWDTVTGA----CMYSIQAHDGCIHALTYSDS-----Y 138 (166)
Q Consensus 81 ~~~~~~v~~~~~~~-------------~~~~~~~~~~d~~v~~~d~~~~~----~~~~~~~~~~~v~~i~~~~~-----~ 138 (166)
..|...|.+++|+| ++..+++++.|+.|++||++++. ....+.+|...|.+++|+|+ +
T Consensus 144 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~ 223 (379)
T 3jrp_A 144 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY 223 (379)
T ss_dssp ECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCe
Confidence 68999999999999 68999999999999999998764 45667889999999999974 7
Q ss_pred EEEeecCCcEEEEECCccc
Q psy16373 139 VISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 139 l~~~~~d~~i~~wd~~~~~ 157 (166)
+++++.|+.|++||++++.
T Consensus 224 l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 224 LASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp EEEEETTSCEEEEEESSTT
T ss_pred EEEEeCCCEEEEEeCCCCC
Confidence 9999999999999998864
No 86
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.91 E-value=1.6e-22 Score=143.59 Aligned_cols=147 Identities=16% Similarity=0.179 Sum_probs=127.1
Q ss_pred EEEEecCCCceEEEeecccccceeeceeeeeeee-ccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373 8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR-AHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC 84 (166)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~ 84 (166)
..+++++.++.+++|+....... ..+. .|...|.+++| ++++|++|+.||.|++||+.+++.+..+.+|.
T Consensus 104 ~~l~~~~~d~~v~lw~~~~~~~~-------~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 176 (401)
T 4aez_A 104 LNVVAVALERNVYVWNADSGSVS-------ALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQ 176 (401)
T ss_dssp TSEEEEEETTEEEEEETTTCCEE-------EEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCS
T ss_pred CCEEEEECCCeEEEeeCCCCcEe-------EeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCC
Confidence 45777888999999998654311 1222 37889999999 78899999999999999999999999999999
Q ss_pred CceEEEEEcCCCCEEEEecCCCcEEEEeCc-CCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceee
Q psy16373 85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTV-TGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLST 161 (166)
Q Consensus 85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~-~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~ 161 (166)
..|.+++|+ +..+++++.||.+++||++ ....+..+.+|...|.+++|+| ..+++++.|+.|++||+++++.+..
T Consensus 177 ~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~ 254 (401)
T 4aez_A 177 ARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFT 254 (401)
T ss_dssp SCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEE
T ss_pred CceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEE
Confidence 999999994 5799999999999999999 5677888899999999999998 4899999999999999999888776
Q ss_pred ee
Q psy16373 162 IQ 163 (166)
Q Consensus 162 ~~ 163 (166)
+.
T Consensus 255 ~~ 256 (401)
T 4aez_A 255 KT 256 (401)
T ss_dssp EC
T ss_pred ec
Confidence 64
No 87
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.91 E-value=5.4e-23 Score=152.23 Aligned_cols=143 Identities=13% Similarity=0.204 Sum_probs=125.9
Q ss_pred eEEEEecCC-CceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC-
Q psy16373 7 RIHLRTGSA-GSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG- 82 (166)
Q Consensus 7 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~- 82 (166)
+..+++++. ++.+++|+...... .. ..+.+|...|.+++| ++++|++++.|+.|++||+.+++.+..+.+
T Consensus 456 ~~~l~~~~~~d~~i~~~~~~~~~~-----~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 529 (615)
T 1pgu_A 456 QNYVAVGLEEGNTIQVFKLSDLEV-----SF-DLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAF 529 (615)
T ss_dssp SSEEEEEETTTSCEEEEETTEEEE-----EE-ECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEECCSCC
T ss_pred CCEEEEeecCCCeEEEEECCCccc-----cc-cccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCcceeEeecC
Confidence 456778888 89999999865421 11 456689999999999 889999999999999999999999998888
Q ss_pred CCCceEEEEEcC----------CCCEEEEecCCCcEEEEeCcCC-eeeEEeecccccEEEEEEcC-CeEEEeecCCcEEE
Q psy16373 83 HCGPITTLFIDG----------VSMMSGSGSQDGLLCVWDTVTG-ACMYSIQAHDGCIHALTYSD-SYVISLGQDERLCV 150 (166)
Q Consensus 83 ~~~~v~~~~~~~----------~~~~~~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~~ 150 (166)
|...|++++|+| ++.++++++.|+.|++||++++ +++..+.+|...|++++|+| +.|++++.|+.|++
T Consensus 530 h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~l~s~~~d~~v~i 609 (615)
T 1pgu_A 530 RTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGADACIKR 609 (615)
T ss_dssp CSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTEEEEEETTSCEEE
T ss_pred CCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCCeEEecCCceEEE
Confidence 999999999999 9999999999999999999988 78888999999999999998 24999999999999
Q ss_pred EECCc
Q psy16373 151 WDRFQ 155 (166)
Q Consensus 151 wd~~~ 155 (166)
|++.+
T Consensus 610 w~~~~ 614 (615)
T 1pgu_A 610 WNVVL 614 (615)
T ss_dssp EEEC-
T ss_pred Eeeec
Confidence 99865
No 88
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.91 E-value=2.4e-22 Score=140.61 Aligned_cols=146 Identities=10% Similarity=0.089 Sum_probs=122.0
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccccee--h
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF--T 79 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~--~ 79 (166)
+..+..+++|+.++.+++|+..... ......+.+|...|.+++| ++++|++++.|+.|++||+++++... .
T Consensus 17 s~~~~~l~~~~~d~~v~i~~~~~~~-----~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~ 91 (372)
T 1k8k_C 17 NKDRTQIAICPNNHEVHIYEKSGNK-----WVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLV 91 (372)
T ss_dssp CTTSSEEEEECSSSEEEEEEEETTE-----EEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEEEE
T ss_pred CCCCCEEEEEeCCCEEEEEeCCCCc-----EEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeeeEE
Confidence 3456789999999999999976432 1245567789999999999 78899999999999999998876443 3
Q ss_pred hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee---eEE-eecccccEEEEEEcC--CeEEEeecCCcEEEEEC
Q psy16373 80 LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC---MYS-IQAHDGCIHALTYSD--SYVISLGQDERLCVWDR 153 (166)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~---~~~-~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~ 153 (166)
+..|...|.+++|+|++.++++++.|+.+++||++.+.. ... ...|...|.+++|+| ..+++++.|+.|++||+
T Consensus 92 ~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 171 (372)
T 1k8k_C 92 ILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSA 171 (372)
T ss_dssp CCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred eecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEc
Confidence 456889999999999999999999999999999987763 233 356788999999998 48999999999999996
Q ss_pred C
Q psy16373 154 F 154 (166)
Q Consensus 154 ~ 154 (166)
+
T Consensus 172 ~ 172 (372)
T 1k8k_C 172 Y 172 (372)
T ss_dssp C
T ss_pred c
Confidence 4
No 89
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.91 E-value=5.6e-22 Score=138.95 Aligned_cols=103 Identities=18% Similarity=0.261 Sum_probs=89.7
Q ss_pred cEEEE--EecCCeEEEEEccccc----------------ceehhcCCCCceEEEEEcCCCCEEEEecCCCc-EEEEeCcC
Q psy16373 55 NRVIT--GSQDHTLKVYKLEDQQ----------------LLFTLHGHCGPITTLFIDGVSMMSGSGSQDGL-LCVWDTVT 115 (166)
Q Consensus 55 ~~l~~--~~~d~~v~v~~~~~~~----------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~-v~~~d~~~ 115 (166)
..++. |+.||.|++||+.+++ .+..+.+|...|.+++|+|++.++++++.|++ |++||+++
T Consensus 148 ~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~ 227 (355)
T 3vu4_A 148 GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTED 227 (355)
T ss_dssp TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTT
T ss_pred cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 34444 5788999999998765 26778899999999999999999999999998 99999999
Q ss_pred CeeeEEee-c-ccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373 116 GACMYSIQ-A-HDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 116 ~~~~~~~~-~-~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~ 157 (166)
++++..+. + |...|.+++|+| .+|++++.|+.|++||++.+.
T Consensus 228 ~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 228 GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 99999998 5 899999999999 489999999999999998764
No 90
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.91 E-value=2.6e-22 Score=143.33 Aligned_cols=153 Identities=20% Similarity=0.279 Sum_probs=124.7
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEE--EecCCeEEEEEcccccceeh
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVIT--GSQDHTLKVYKLEDQQLLFT 79 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~--~~~d~~v~v~~~~~~~~~~~ 79 (166)
..+..+++++.|+.+.+|+....... .........|...|.+++| .+..+++ |+.|+.|++||+.+++....
T Consensus 240 ~~g~~l~s~~~D~~v~i~~~~~~~~~---~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~ 316 (420)
T 4gga_A 240 PDGRHLASGGNDNLVNVWPSAPGEGG---WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA 316 (420)
T ss_dssp TTSSEEEEEETTSCEEEEESSCCSSC---SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEE
T ss_pred CCCCeeeeeeccccceEEeecccccc---ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccccee
Confidence 34567899999999999987654321 1233455688999999999 4566665 45799999999999998887
Q ss_pred hcCCCCceEEEEEcCCCCEEEEec--CCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373 80 LHGHCGPITTLFIDGVSMMSGSGS--QDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQ 155 (166)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~~~~~~--~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~ 155 (166)
+..+ ..+.++.++|++..+++++ .|+.|++||+++++++..+.+|.+.|++++|+| .+|++++.|++|++||+.+
T Consensus 317 ~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 317 VDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp EECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred eccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 7744 5788999999988887654 789999999999999999999999999999998 4899999999999999987
Q ss_pred ccceee
Q psy16373 156 GHLLST 161 (166)
Q Consensus 156 ~~~~~~ 161 (166)
..+..+
T Consensus 396 ~~~~~~ 401 (420)
T 4gga_A 396 LDPARR 401 (420)
T ss_dssp SSCC--
T ss_pred CCccch
Confidence 665543
No 91
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.5e-22 Score=141.12 Aligned_cols=151 Identities=15% Similarity=0.088 Sum_probs=132.3
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG 82 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~ 82 (166)
..+..+++++.++.+.+|+..... .....+..|..+|.+++| ++.+|++++.|+.|++||+++++.+..+.
T Consensus 185 ~~~~~l~~~~~dg~i~i~d~~~~~------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~- 257 (369)
T 3zwl_B 185 TKGKYIIAGHKDGKISKYDVSNNY------EYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE- 257 (369)
T ss_dssp GGGCEEEEEETTSEEEEEETTTTT------EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-
T ss_pred CCCCEEEEEcCCCEEEEEECCCCc------EeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-
Confidence 345688999999999999986532 234466789999999999 88899999999999999999998888777
Q ss_pred CCCceEEEEEcCCCCEEEEecCCC--------------cEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCC
Q psy16373 83 HCGPITTLFIDGVSMMSGSGSQDG--------------LLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDE 146 (166)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~~~~~d~--------------~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~ 146 (166)
+...+.+++++|++..+++++.++ .+++||..+++.+..+.+|...|++++|+| .+|++++.|+
T Consensus 258 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg 337 (369)
T 3zwl_B 258 TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDG 337 (369)
T ss_dssp CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCC
Confidence 778899999999999999999888 899999999999999999999999999998 4899999999
Q ss_pred cEEEEECCcccceeee
Q psy16373 147 RLCVWDRFQGHLLSTI 162 (166)
Q Consensus 147 ~i~~wd~~~~~~~~~~ 162 (166)
.|++|+++++.....+
T Consensus 338 ~v~iw~~~~~~~~~~~ 353 (369)
T 3zwl_B 338 FIRLHHFEKSYFDFKY 353 (369)
T ss_dssp EEEEEEECHHHHTCCC
T ss_pred eEEEEECccccchhHH
Confidence 9999999887665544
No 92
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.3e-22 Score=154.29 Aligned_cols=150 Identities=14% Similarity=0.160 Sum_probs=128.6
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c--CcEEEEEecCCeEEEEEccccc--ce
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V--SNRVITGSQDHTLKVYKLEDQQ--LL 77 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~--~~~l~~~~~d~~v~v~~~~~~~--~~ 77 (166)
+..+..+++|+.++.+++|+..... ......+.+|..+|.+++| + +++|++|+.||.|++||+.+++ ..
T Consensus 18 s~dg~~latg~~dg~I~vwd~~~~~-----~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~ 92 (753)
T 3jro_A 18 DYYGKRLATCSSDKTIKIFEVEGET-----HKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQI 92 (753)
T ss_dssp CSSSCCEEEEETTTEEEEEEEETTE-----EEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEEE
T ss_pred CCCCCeEEEEECCCcEEEEecCCCC-----CccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccccc
Confidence 4556789999999999999976322 2344567799999999999 4 7899999999999999999886 66
Q ss_pred ehhcCCCCceEEEEEcCC--CCEEEEecCCCcEEEEeCcCC--eeeEEeecccccEEEEEEcC---------------Ce
Q psy16373 78 FTLHGHCGPITTLFIDGV--SMMSGSGSQDGLLCVWDTVTG--ACMYSIQAHDGCIHALTYSD---------------SY 138 (166)
Q Consensus 78 ~~~~~~~~~v~~~~~~~~--~~~~~~~~~d~~v~~~d~~~~--~~~~~~~~~~~~v~~i~~~~---------------~~ 138 (166)
..+.+|...|.+++|+|+ +..+++++.||.|++||++++ .....+.+|...|.++.|+| ..
T Consensus 93 ~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~ 172 (753)
T 3jro_A 93 AVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRK 172 (753)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCC
T ss_pred ccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCE
Confidence 777889999999999999 999999999999999999877 34456678899999999987 38
Q ss_pred EEEeecCCcEEEEECCcccc
Q psy16373 139 VISLGQDERLCVWDRFQGHL 158 (166)
Q Consensus 139 l~~~~~d~~i~~wd~~~~~~ 158 (166)
+++++.|+.|++||++++..
T Consensus 173 l~sgs~dg~I~iwd~~~~~~ 192 (753)
T 3jro_A 173 FVTGGADNLVKIWKYNSDAQ 192 (753)
T ss_dssp EEEEETTSCEEEEEEETTTT
T ss_pred EEEEECCCeEEEEeccCCcc
Confidence 99999999999999988743
No 93
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.2e-22 Score=142.78 Aligned_cols=142 Identities=18% Similarity=0.148 Sum_probs=127.9
Q ss_pred EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCC
Q psy16373 8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCG 85 (166)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~ 85 (166)
..+++++.++.+.+|+..... ....+.+|..+|.+++| ++++|++++.|+.|++||+.+++.+..+..|..
T Consensus 218 ~~~~~~~~~g~i~~~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 290 (425)
T 1r5m_A 218 DKFVIPGPKGAIFVYQITEKT-------PTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQ 290 (425)
T ss_dssp TEEEEECGGGCEEEEETTCSS-------CSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSS
T ss_pred CEEEEEcCCCeEEEEEcCCCc-------eeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCc
Confidence 357888889999999976542 23355688999999999 788999999999999999999999888889999
Q ss_pred ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373 86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~ 157 (166)
.|.+++|+|++ .+++++.|+.+++||+++++.+..+..|...|.+++|+| .++++++.|+.|++||+++++
T Consensus 291 ~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 291 SIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp CEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred cEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 99999999999 999999999999999999999999999999999999998 589999999999999999887
No 94
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.91 E-value=4.7e-22 Score=140.47 Aligned_cols=150 Identities=15% Similarity=0.233 Sum_probs=118.8
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCc-EEEEEecCCeEEEEEccccc-ceehh-
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSN-RVITGSQDHTLKVYKLEDQQ-LLFTL- 80 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~-~l~~~~~d~~v~v~~~~~~~-~~~~~- 80 (166)
....+++++.++.+.+|+..... ....+.+|..+|.+++| ++. .+++++.|+.|++||++++. ....+
T Consensus 155 ~~~~~~~~~~~~~v~~~d~~~~~-------~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~ 227 (408)
T 4a11_B 155 KHCLVAVGTRGPKVQLCDLKSGS-------CSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLD 227 (408)
T ss_dssp SCCEEEEEESSSSEEEEESSSSC-------CCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECC
T ss_pred CCcEEEEEcCCCeEEEEeCCCcc-------eeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccccc
Confidence 44588999999999999986443 23456789999999999 455 69999999999999998654 22222
Q ss_pred --------------cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC------------------------------
Q psy16373 81 --------------HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG------------------------------ 116 (166)
Q Consensus 81 --------------~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~------------------------------ 116 (166)
..|...|.+++|+|++.++++++.|+.+++||++++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (408)
T 4a11_B 228 QHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEF 307 (408)
T ss_dssp TTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCE
T ss_pred ccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceE
Confidence 568899999999999999999999999999998754
Q ss_pred -----------------eeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeee
Q psy16373 117 -----------------ACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTI 162 (166)
Q Consensus 117 -----------------~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~ 162 (166)
+++..+.+|...|++++|+| .+|++++.|+.|++||+++++++...
T Consensus 308 ~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~ 372 (408)
T 4a11_B 308 VFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDD 372 (408)
T ss_dssp EEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-------
T ss_pred EEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCC
Confidence 34556677899999999998 48999999999999999998877643
No 95
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.90 E-value=3.6e-22 Score=142.99 Aligned_cols=155 Identities=14% Similarity=0.158 Sum_probs=122.9
Q ss_pred EEEEecCCCceEEEeecccccceee--------------------------------ceeeeee-eeccCCceEEEEe--
Q psy16373 8 IHLRTGSAGSLLDFKKMQVEEEMTL--------------------------------TCCKVES-TRAHHQPITVLEC-- 52 (166)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~-~~~~~~~i~~~~~-- 52 (166)
..+++++.|+.+++|+......... ....... ..+|...|.+++|
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 5788999999999999865321100 0001112 3579999999999
Q ss_pred cCcEEEEEecCCeEEEEEccc-cccee-------hhcCCCCceEEEEEcCCC-CEEEEecCCCcEEEEeCcCCee----e
Q psy16373 53 VSNRVITGSQDHTLKVYKLED-QQLLF-------TLHGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGAC----M 119 (166)
Q Consensus 53 ~~~~l~~~~~d~~v~v~~~~~-~~~~~-------~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~~~----~ 119 (166)
++++|++| .|+.|++||+++ ++... .+.+|...|.+++|+|++ ..+++++.||.|++||+++++. +
T Consensus 188 ~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 266 (447)
T 3dw8_B 188 DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHS 266 (447)
T ss_dssp TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTC
T ss_pred CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcccccee
Confidence 78899998 799999999994 44433 466899999999999998 9999999999999999998886 6
Q ss_pred EEeecccc------------cEEEEEEcC--CeEEEeecCCcEEEEECCc-ccceeeeee
Q psy16373 120 YSIQAHDG------------CIHALTYSD--SYVISLGQDERLCVWDRFQ-GHLLSTIQL 164 (166)
Q Consensus 120 ~~~~~~~~------------~v~~i~~~~--~~l~~~~~d~~i~~wd~~~-~~~~~~~~~ 164 (166)
..+..|.. .|.+++|+| .+|++++. +.|++||+++ ++++..+..
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~ 325 (447)
T 3dw8_B 267 KLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQV 325 (447)
T ss_dssp EEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEES
T ss_pred eEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeec
Confidence 77887776 899999998 48888888 9999999997 777776653
No 96
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.90 E-value=1.9e-22 Score=140.64 Aligned_cols=130 Identities=22% Similarity=0.335 Sum_probs=113.8
Q ss_pred eeeeeeeccCCceEEEEe--c---CcEEEEEecCCeEEEEEccc-ccce-ehhcCCCCceEEEEEcCCCCEEEEecCCCc
Q psy16373 35 CKVESTRAHHQPITVLEC--V---SNRVITGSQDHTLKVYKLED-QQLL-FTLHGHCGPITTLFIDGVSMMSGSGSQDGL 107 (166)
Q Consensus 35 ~~~~~~~~~~~~i~~~~~--~---~~~l~~~~~d~~v~v~~~~~-~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~ 107 (166)
.....+.+|...|.+++| + +++|++|+.|+.|++||+.+ ++.+ ..+.+|...|.+++|+|++.++++++.||.
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~ 109 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKT 109 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSE
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCc
Confidence 445567799999999999 4 48999999999999999997 4444 677889999999999999999999999999
Q ss_pred EEEEeCcCCeeeEEeecccccEEEEEE--cC--CeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373 108 LCVWDTVTGACMYSIQAHDGCIHALTY--SD--SYVISLGQDERLCVWDRFQGHLLSTIQLQ 165 (166)
Q Consensus 108 v~~~d~~~~~~~~~~~~~~~~v~~i~~--~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 165 (166)
|++||+++++.+. +..|...|.+++| ++ ..+++++.|+.|++||+++++.+..+..+
T Consensus 110 v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~ 170 (368)
T 3mmy_A 110 AKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLP 170 (368)
T ss_dssp EEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECS
T ss_pred EEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecC
Confidence 9999999988766 5568999999999 66 37999999999999999999988877643
No 97
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.90 E-value=2.9e-22 Score=139.42 Aligned_cols=147 Identities=11% Similarity=0.062 Sum_probs=121.8
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEec-----CcEEEEEecCCeEEEEEccccccee
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECV-----SNRVITGSQDHTLKVYKLEDQQLLF 78 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~l~~~~~d~~v~v~~~~~~~~~~ 78 (166)
+..+..+++++.++.+++|+...... .....|...|.+++|. ++.+++++.|+.|++||+++++...
T Consensus 177 ~~~~~~l~~~~~d~~i~i~d~~~~~~--------~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 248 (357)
T 3i2n_A 177 NQEERVVCAGYDNGDIKLFDLRNMAL--------RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTK 248 (357)
T ss_dssp C-CCCEEEEEETTSEEEEEETTTTEE--------EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTT
T ss_pred CCCCCEEEEEccCCeEEEEECccCce--------eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCccc
Confidence 35677899999999999999865431 1235678899999993 5889999999999999999887766
Q ss_pred hhc-----CCCCceEEEEEcCCCC-EEEEecCCCcEEEEeCcCC-------------------eeeEEeecccccEEEEE
Q psy16373 79 TLH-----GHCGPITTLFIDGVSM-MSGSGSQDGLLCVWDTVTG-------------------ACMYSIQAHDGCIHALT 133 (166)
Q Consensus 79 ~~~-----~~~~~v~~~~~~~~~~-~~~~~~~d~~v~~~d~~~~-------------------~~~~~~~~~~~~v~~i~ 133 (166)
.+. +|...|.+++|+|++. ++++++.||.+++||++++ +.+..+.+|..+|++++
T Consensus 249 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~ 328 (357)
T 3i2n_A 249 GFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLD 328 (357)
T ss_dssp EEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEE
T ss_pred ceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEE
Confidence 655 8999999999999988 8999999999999999754 35677888999999999
Q ss_pred EcCC--eEE-EeecCCcEEEEECCcccc
Q psy16373 134 YSDS--YVI-SLGQDERLCVWDRFQGHL 158 (166)
Q Consensus 134 ~~~~--~l~-~~~~d~~i~~wd~~~~~~ 158 (166)
|+|+ .++ +++.|+.|++||+.+.+.
T Consensus 329 ~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 329 WSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp ECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred EcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 9983 676 899999999999987654
No 98
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.90 E-value=8.4e-23 Score=144.93 Aligned_cols=158 Identities=12% Similarity=0.181 Sum_probs=131.8
Q ss_pred eEEEEecCCCceEEEeecccccceee--ceeeeeeeeccCCceEEEEe--c-CcEEEEEecCCeEEEEEcccccceehhc
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTL--TCCKVESTRAHHQPITVLEC--V-SNRVITGSQDHTLKVYKLEDQQLLFTLH 81 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~i~~~~~--~-~~~l~~~~~d~~v~v~~~~~~~~~~~~~ 81 (166)
+..+++++.++.+++|+......... .........+|...|.+++| + +.+|++++.|+.|++||+++++.+..+.
T Consensus 126 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 205 (416)
T 2pm9_A 126 DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLS 205 (416)
T ss_dssp TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEe
Confidence 56889999999999999865541100 11112234678999999999 4 6799999999999999999998888777
Q ss_pred CC------CCceEEEEEcCCC-CEEEEecCCC---cEEEEeCcCC-eeeEEee-cccccEEEEEEcC---CeEEEeecCC
Q psy16373 82 GH------CGPITTLFIDGVS-MMSGSGSQDG---LLCVWDTVTG-ACMYSIQ-AHDGCIHALTYSD---SYVISLGQDE 146 (166)
Q Consensus 82 ~~------~~~v~~~~~~~~~-~~~~~~~~d~---~v~~~d~~~~-~~~~~~~-~~~~~v~~i~~~~---~~l~~~~~d~ 146 (166)
.+ ...|.+++|+|++ ..+++++.|+ .|++||++++ .++..+. +|...|.+++|+| .++++++.|+
T Consensus 206 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg 285 (416)
T 2pm9_A 206 YTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN 285 (416)
T ss_dssp CCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS
T ss_pred ccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCC
Confidence 66 7889999999996 6899999998 9999999986 6777787 8999999999987 4899999999
Q ss_pred cEEEEECCcccceeeeee
Q psy16373 147 RLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 147 ~i~~wd~~~~~~~~~~~~ 164 (166)
.|++||+++++++..+..
T Consensus 286 ~v~~wd~~~~~~~~~~~~ 303 (416)
T 2pm9_A 286 TVLLWNPESAEQLSQFPA 303 (416)
T ss_dssp EEEEECSSSCCEEEEEEC
T ss_pred CEEEeeCCCCccceeecC
Confidence 999999999998887764
No 99
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.90 E-value=1.1e-21 Score=134.51 Aligned_cols=155 Identities=17% Similarity=0.210 Sum_probs=118.3
Q ss_pred ccceEEEEecCCCceEEEeecccccceee----------------------------------ceeeeeeeeccCCceEE
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTL----------------------------------TCCKVESTRAHHQPITV 49 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~i~~ 49 (166)
+..+..+++|+.|+.+++|+.+..+.... .......+.+|...+.+
T Consensus 76 ~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (318)
T 4ggc_A 76 IKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCG 155 (318)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEE
T ss_pred CCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEE
Confidence 45667888889999988888754332110 01223445688899999
Q ss_pred EEe--cCcEEEEEecCCeEEEEEcccccceeh----h-------------------------------------------
Q psy16373 50 LEC--VSNRVITGSQDHTLKVYKLEDQQLLFT----L------------------------------------------- 80 (166)
Q Consensus 50 ~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~----~------------------------------------------- 80 (166)
+.+ .++++++++.|+.|++||+++++.... .
T Consensus 156 ~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~ 235 (318)
T 4ggc_A 156 LRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS 235 (318)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEE
T ss_pred EEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccc
Confidence 999 888999999999999999976532110 0
Q ss_pred -cCCCCceEEEEEcCCCCEEEEe--cCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373 81 -HGHCGPITTLFIDGVSMMSGSG--SQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQ 155 (166)
Q Consensus 81 -~~~~~~v~~~~~~~~~~~~~~~--~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~ 155 (166)
..+...+..+.++|.+..++++ +.|+.|++||+++++++..+.+|.+.|++++|+| .+|++++.|++|++||+.+
T Consensus 236 ~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 236 AVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred cccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 1123345677778877766654 4799999999999999999999999999999998 4899999999999999977
Q ss_pred ccc
Q psy16373 156 GHL 158 (166)
Q Consensus 156 ~~~ 158 (166)
..+
T Consensus 316 ~dP 318 (318)
T 4ggc_A 316 LDP 318 (318)
T ss_dssp CCC
T ss_pred CCC
Confidence 543
No 100
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.90 E-value=1.5e-21 Score=144.48 Aligned_cols=126 Identities=17% Similarity=0.218 Sum_probs=112.3
Q ss_pred eeccCCceEEEEe--cCc-EEEEEecCCeEEEEEcccccceehhcCCCC---ceEEEEEcCC-CCEEEEecCCCcEEEEe
Q psy16373 40 TRAHHQPITVLEC--VSN-RVITGSQDHTLKVYKLEDQQLLFTLHGHCG---PITTLFIDGV-SMMSGSGSQDGLLCVWD 112 (166)
Q Consensus 40 ~~~~~~~i~~~~~--~~~-~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~---~v~~~~~~~~-~~~~~~~~~d~~v~~~d 112 (166)
+.+|...|.+++| ++. .+++++.|+.|++||+.+++.+..+.+|.. .|.+++|+|+ ++++++++.|+.+++||
T Consensus 156 ~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd 235 (615)
T 1pgu_A 156 VSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFD 235 (615)
T ss_dssp CCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEE
T ss_pred eecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEE
Confidence 4456777888888 443 799999999999999999999999999998 9999999999 99999999999999999
Q ss_pred CcCCeeeEEe-e---cccccEEEEEEc-CCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373 113 TVTGACMYSI-Q---AHDGCIHALTYS-DSYVISLGQDERLCVWDRFQGHLLSTIQLQ 165 (166)
Q Consensus 113 ~~~~~~~~~~-~---~~~~~v~~i~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 165 (166)
+++++.+..+ . .|...|.+++|+ ...+++++.|+.|++||+++++.+..+..+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 293 (615)
T 1pgu_A 236 GKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLD 293 (615)
T ss_dssp TTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCC
Confidence 9999999988 6 899999999996 358999999999999999999888877643
No 101
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.7e-22 Score=143.39 Aligned_cols=147 Identities=15% Similarity=0.170 Sum_probs=126.5
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeec------cCCceEEEEe--cC-cEEEEEecCC---eEEEEEcccc
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRA------HHQPITVLEC--VS-NRVITGSQDH---TLKVYKLEDQ 74 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~i~~~~~--~~-~~l~~~~~d~---~v~v~~~~~~ 74 (166)
+..+++++.++.+++|+...... ...+.. |...|.+++| ++ .++++++.|+ .|++||++++
T Consensus 178 ~~~l~~~~~dg~v~iwd~~~~~~-------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~ 250 (416)
T 2pm9_A 178 AHVFASAGSSNFASIWDLKAKKE-------VIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA 250 (416)
T ss_dssp TTEEEEESSSSCEEEEETTTTEE-------EEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST
T ss_pred CcEEEEEcCCCCEEEEECCCCCc-------ceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC
Confidence 56889999999999999865431 222233 3789999999 43 5899999998 9999999986
Q ss_pred -cceehhc-CCCCceEEEEEcC-CCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC---CeEEEeecCCcE
Q psy16373 75 -QLLFTLH-GHCGPITTLFIDG-VSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD---SYVISLGQDERL 148 (166)
Q Consensus 75 -~~~~~~~-~~~~~v~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~---~~l~~~~~d~~i 148 (166)
+.+..+. +|...|.+++|+| ++.++++++.|+.+++||+++++++..+..|...|.+++|+| .++++++.|+.|
T Consensus 251 ~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i 330 (416)
T 2pm9_A 251 NTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKI 330 (416)
T ss_dssp TSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEE
T ss_pred CCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcE
Confidence 6677777 8999999999999 899999999999999999999999999999999999999998 489999999999
Q ss_pred EEEECCccccee
Q psy16373 149 CVWDRFQGHLLS 160 (166)
Q Consensus 149 ~~wd~~~~~~~~ 160 (166)
++||+.++....
T Consensus 331 ~iw~~~~~~~~~ 342 (416)
T 2pm9_A 331 EVQTLQNLTNTL 342 (416)
T ss_dssp EEEESCCCCCSS
T ss_pred EEEEccCCCCCc
Confidence 999998876543
No 102
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.8e-22 Score=140.64 Aligned_cols=146 Identities=10% Similarity=0.002 Sum_probs=115.6
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeee-eccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccce-ehhc
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVEST-RAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLL-FTLH 81 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~-~~~~ 81 (166)
.+..+++|+.|+.+++|+...... .... ..|...+.+++| ++.+|++|+.|+.|++||+++++.+ ..+.
T Consensus 138 ~~~~l~s~s~dg~i~~wd~~~~~~-------~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~ 210 (343)
T 3lrv_A 138 NTEYFIWADNRGTIGFQSYEDDSQ-------YIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFP 210 (343)
T ss_dssp -CCEEEEEETTCCEEEEESSSSCE-------EEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECC
T ss_pred CCCEEEEEeCCCcEEEEECCCCcE-------EEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEe
Confidence 567899999999999999875442 1122 245567999999 7889999999999999999999877 7788
Q ss_pred C-CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec---ccccEE--EEEEcC--CeEEEeec-CCcEEEEE
Q psy16373 82 G-HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA---HDGCIH--ALTYSD--SYVISLGQ-DERLCVWD 152 (166)
Q Consensus 82 ~-~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~---~~~~v~--~i~~~~--~~l~~~~~-d~~i~~wd 152 (166)
. |..+|.+++|+|++.++++++ ++.|++||+++++.+..+.. |...+. +++|+| .++++++. |+.|++|+
T Consensus 211 ~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~ 289 (343)
T 3lrv_A 211 VDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYK 289 (343)
T ss_dssp CCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEE
Confidence 7 999999999999999999999 45999999998877655543 333443 599998 48888888 99999999
Q ss_pred CCcccce
Q psy16373 153 RFQGHLL 159 (166)
Q Consensus 153 ~~~~~~~ 159 (166)
+.+....
T Consensus 290 ~~~~~~~ 296 (343)
T 3lrv_A 290 FDKKTKN 296 (343)
T ss_dssp ECTTTCS
T ss_pred Ecccccc
Confidence 8665443
No 103
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.90 E-value=2.3e-22 Score=142.64 Aligned_cols=142 Identities=18% Similarity=0.074 Sum_probs=124.9
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCC
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC 84 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~ 84 (166)
.+..+++++.++.+++|+..... ....+.+|...|.+++| ....+++++.|+.|++||+.+++.+..+..|.
T Consensus 258 ~~~~l~~~~~d~~i~i~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 330 (425)
T 1r5m_A 258 TNKLLLSASDDGTLRIWHGGNGN-------SQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIVDG 330 (425)
T ss_dssp TTTEEEEEETTSCEEEECSSSBS-------CSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEECTT
T ss_pred CCCEEEEEcCCCEEEEEECCCCc-------cceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEecccCC
Confidence 44578899999999999976533 23355678999999999 33399999999999999999999999999999
Q ss_pred CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe--------------------eeEEeecccc--cEEEEEEcC--CeEE
Q psy16373 85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA--------------------CMYSIQAHDG--CIHALTYSD--SYVI 140 (166)
Q Consensus 85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~--------------------~~~~~~~~~~--~v~~i~~~~--~~l~ 140 (166)
..+.+++|+|++.++++++.||.|++||+++++ .+..+..|.. .|++++|+| .+|+
T Consensus 331 ~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 410 (425)
T 1r5m_A 331 VPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKIS 410 (425)
T ss_dssp CCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEE
T ss_pred ccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEE
Confidence 999999999999999999999999999999888 8888988876 999999998 4899
Q ss_pred EeecCCcEEEEECC
Q psy16373 141 SLGQDERLCVWDRF 154 (166)
Q Consensus 141 ~~~~d~~i~~wd~~ 154 (166)
+++.|+.|++||++
T Consensus 411 ~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 411 VAYSLQEGSVVAIP 424 (425)
T ss_dssp EEESSSCCEEEECC
T ss_pred EEecCceEEEEeec
Confidence 99999999999985
No 104
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.89 E-value=1.1e-21 Score=136.54 Aligned_cols=149 Identities=16% Similarity=0.209 Sum_probs=120.6
Q ss_pred EEEEecCC---CceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c---CcEEEEEecCCeEEEEEccccc-cee
Q psy16373 8 IHLRTGSA---GSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V---SNRVITGSQDHTLKVYKLEDQQ-LLF 78 (166)
Q Consensus 8 ~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~---~~~l~~~~~d~~v~v~~~~~~~-~~~ 78 (166)
.++++|+. ++.+++|+....... .....+|..+|.+++| + +++|++++.|+.|++||+.+++ .+.
T Consensus 32 ~l~~~~s~~~~d~~v~iw~~~~~~~~------~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~ 105 (357)
T 3i2n_A 32 KFVTMGNFARGTGVIQLYEIQHGDLK------LLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVY 105 (357)
T ss_dssp EEEEEEC--CCCEEEEEEEECSSSEE------EEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSE
T ss_pred eEEEecCccCCCcEEEEEeCCCCccc------ceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEE
Confidence 56777776 899999998654311 1122378899999999 4 5899999999999999999887 888
Q ss_pred hhcCCCCceEEEEE------cCCCCEEEEecCCCcEEEEeCcCCe-eeEEeecccc----cEEEEE----EcC--CeEEE
Q psy16373 79 TLHGHCGPITTLFI------DGVSMMSGSGSQDGLLCVWDTVTGA-CMYSIQAHDG----CIHALT----YSD--SYVIS 141 (166)
Q Consensus 79 ~~~~~~~~v~~~~~------~~~~~~~~~~~~d~~v~~~d~~~~~-~~~~~~~~~~----~v~~i~----~~~--~~l~~ 141 (166)
.+.+|...|.++++ +|+++.+++++.|+.+++||+++++ ++..+..|.+ .+.+++ |++ ..+++
T Consensus 106 ~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 185 (357)
T 3i2n_A 106 SVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCA 185 (357)
T ss_dssp EECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEE
T ss_pred EEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEE
Confidence 88999999999954 6789999999999999999999886 6777766554 788888 455 58999
Q ss_pred eecCCcEEEEECCcccceeee
Q psy16373 142 LGQDERLCVWDRFQGHLLSTI 162 (166)
Q Consensus 142 ~~~d~~i~~wd~~~~~~~~~~ 162 (166)
++.|+.|++||+++++.+...
T Consensus 186 ~~~d~~i~i~d~~~~~~~~~~ 206 (357)
T 3i2n_A 186 GYDNGDIKLFDLRNMALRWET 206 (357)
T ss_dssp EETTSEEEEEETTTTEEEEEE
T ss_pred EccCCeEEEEECccCceeeec
Confidence 999999999999998875543
No 105
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=8.5e-22 Score=152.27 Aligned_cols=143 Identities=17% Similarity=0.192 Sum_probs=120.2
Q ss_pred EEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccce---------
Q psy16373 9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLL--------- 77 (166)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~--------- 77 (166)
++++++.|+.+++|+..... .+..+. |...|.+++| ++++|++|+.||.|++||+++++..
T Consensus 71 ~L~S~s~D~~v~lWd~~~~~-------~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~ 142 (902)
T 2oaj_A 71 YLVVINAKDTVYVLSLYSQK-------VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQK 142 (902)
T ss_dssp EEEEEETTCEEEEEETTTCS-------EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHH
T ss_pred EEEEEECcCeEEEEECCCCc-------EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccc
Confidence 68888888899988876432 122332 6678999999 8899999999999999999987653
Q ss_pred --ehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeEEeecc------------------cccEEEEEEcC
Q psy16373 78 --FTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMYSIQAH------------------DGCIHALTYSD 136 (166)
Q Consensus 78 --~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~------------------~~~v~~i~~~~ 136 (166)
..+.+|.+.|.+++|+|+ +..+++++.|+.+ +||+++++++..+..| ...|++++|+|
T Consensus 143 ~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp 221 (902)
T 2oaj_A 143 SSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP 221 (902)
T ss_dssp HHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT
T ss_pred cccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcC
Confidence 344679999999999996 5789999999999 9999999988888765 46799999998
Q ss_pred --CeEEEeecCCcEEEEECCccccee
Q psy16373 137 --SYVISLGQDERLCVWDRFQGHLLS 160 (166)
Q Consensus 137 --~~l~~~~~d~~i~~wd~~~~~~~~ 160 (166)
.+|++++.|+.|++||+++++++.
T Consensus 222 dg~~lasgs~Dg~i~lWd~~~g~~~~ 247 (902)
T 2oaj_A 222 NSLHIITIHEDNSLVFWDANSGHMIM 247 (902)
T ss_dssp TSSEEEEEETTCCEEEEETTTCCEEE
T ss_pred CCCEEEEEECCCeEEEEECCCCcEEE
Confidence 489999999999999999988765
No 106
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.89 E-value=5.8e-22 Score=136.69 Aligned_cols=138 Identities=10% Similarity=0.119 Sum_probs=103.3
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeecc---CCceEEEEe--cCcEE------------EEEecCCeEEEE
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAH---HQPITVLEC--VSNRV------------ITGSQDHTLKVY 69 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~--~~~~l------------~~~~~d~~v~v~ 69 (166)
+..+++|+.|+.+++|+....+ .+.++.+| ...+.+++| ++.++ ++|+.|+++++|
T Consensus 193 ~~~LaSgS~D~TIkIWDl~TGk-------~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklW 265 (356)
T 2w18_A 193 QEALLGTTIMNNIVIWNLKTGQ-------LLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVI 265 (356)
T ss_dssp TTEEEEEETTSEEEEEETTTCC-------EEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEE
T ss_pred CceEEEecCCCcEEEEECCCCc-------EEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEE
Confidence 3678999999999999986543 23344443 235666677 56554 678899999999
Q ss_pred Ecccccceehh-----cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEE-EEEEcCC--eEEE
Q psy16373 70 KLEDQQLLFTL-----HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIH-ALTYSDS--YVIS 141 (166)
Q Consensus 70 ~~~~~~~~~~~-----~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~-~i~~~~~--~l~~ 141 (166)
|..+++.+..+ .+|.....+..++ +..+++++.|++|++||+++++.+.++.+|...+. .++|+|+ +|++
T Consensus 266 d~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaS 343 (356)
T 2w18_A 266 NPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLA 343 (356)
T ss_dssp ETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEE
T ss_pred ECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEE
Confidence 99999876544 3566554444443 77899999999999999999999999998887655 5899994 8999
Q ss_pred eecCCcEEEEEC
Q psy16373 142 LGQDERLCVWDR 153 (166)
Q Consensus 142 ~~~d~~i~~wd~ 153 (166)
|+.|++|++||+
T Consensus 344 GS~D~TIklWd~ 355 (356)
T 2w18_A 344 GQKDGNIFVYHY 355 (356)
T ss_dssp ECTTSCEEEEEE
T ss_pred EECCCcEEEecC
Confidence 999999999995
No 107
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.89 E-value=9.6e-22 Score=136.21 Aligned_cols=147 Identities=13% Similarity=0.064 Sum_probs=124.7
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCc-EEEEEecCCeEEEEEc-ccccceehh
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSN-RVITGSQDHTLKVYKL-EDQQLLFTL 80 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~-~l~~~~~d~~v~v~~~-~~~~~~~~~ 80 (166)
..+..+++++.++.+++|+....... .....+.+|...|.+++| +++ +|++++.|+.|++||+ .+++. ..+
T Consensus 21 ~~~~~l~~~~~d~~v~iw~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~ 95 (342)
T 1yfq_A 21 PSKSLLLITSWDGSLTVYKFDIQAKN----VDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-QAL 95 (342)
T ss_dssp GGGTEEEEEETTSEEEEEEEETTTTE----EEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE-EEC
T ss_pred CCCCEEEEEcCCCeEEEEEeCCCCcc----ccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce-Eec
Confidence 34567899999999999998654311 122344589999999999 788 9999999999999999 76654 667
Q ss_pred cC--CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC---------CeeeEEeecccccEEEEEEcCCeEEEeecCCcEE
Q psy16373 81 HG--HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT---------GACMYSIQAHDGCIHALTYSDSYVISLGQDERLC 149 (166)
Q Consensus 81 ~~--~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~---------~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~ 149 (166)
.+ |...|.+++|+| +..+++++.|+.+++||+++ ++++..+. |...|.+++|+++.+++++.|+.|+
T Consensus 96 ~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~ 173 (342)
T 1yfq_A 96 TNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQ 173 (342)
T ss_dssp BSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSEEEEEESTTEEE
T ss_pred cccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCcEEEEeCCCeEE
Confidence 78 999999999999 99999999999999999988 77777666 8889999999998899999999999
Q ss_pred EEECCc-ccc
Q psy16373 150 VWDRFQ-GHL 158 (166)
Q Consensus 150 ~wd~~~-~~~ 158 (166)
+||+++ +..
T Consensus 174 i~d~~~~~~~ 183 (342)
T 1yfq_A 174 WFRLPLCEDD 183 (342)
T ss_dssp EEESSCCTTC
T ss_pred EEECCccccc
Confidence 999988 553
No 108
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.89 E-value=3e-21 Score=133.13 Aligned_cols=143 Identities=12% Similarity=0.135 Sum_probs=109.4
Q ss_pred CCceEEEeecccccceeeceeeeeeeeccCCceEEEEe-----cCcEEEEEecCCeEEEEEcccccceehhcCCC---Cc
Q psy16373 15 AGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC-----VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHC---GP 86 (166)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-----~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~---~~ 86 (166)
.++.+++|...... ..+..+.+|...+..++| ++..|++++.|++|++||+++++.++++.+|. ..
T Consensus 155 ~d~~V~~~~~s~dG------~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~ 228 (356)
T 2w18_A 155 SDQQVEVMTFAEDG------GGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQAS 228 (356)
T ss_dssp TTCEEEEEEECTTS------CEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CC
T ss_pred CCCcEEEEEECCCC------ceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceee
Confidence 47778888774432 122344566666655555 45899999999999999999999999998654 35
Q ss_pred eEEEEEcCCCCEE------------EEecCCCcEEEEeCcCCeeeEEe-----ecccccEEEEEEcCCeEEEeecCCcEE
Q psy16373 87 ITTLFIDGVSMMS------------GSGSQDGLLCVWDTVTGACMYSI-----QAHDGCIHALTYSDSYVISLGQDERLC 149 (166)
Q Consensus 87 v~~~~~~~~~~~~------------~~~~~d~~v~~~d~~~~~~~~~~-----~~~~~~v~~i~~~~~~l~~~~~d~~i~ 149 (166)
+.+++|+|++..+ ++|+.|+++++||..+++.+..+ .+|.....+..++...+++++.|++|+
T Consensus 229 v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~lASgS~DgTIk 308 (356)
T 2w18_A 229 VCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCAAAILTSGTIA 308 (356)
T ss_dssp CEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEEEEEETTSCEE
T ss_pred eEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEEEEEcCCCcEE
Confidence 7788999999876 56788999999999999887765 356655656666667899999999999
Q ss_pred EEECCcccceeeee
Q psy16373 150 VWDRFQGHLLSTIQ 163 (166)
Q Consensus 150 ~wd~~~~~~~~~~~ 163 (166)
+||+.+++.+.+++
T Consensus 309 IWDl~tGk~l~tL~ 322 (356)
T 2w18_A 309 IWDLLLGQCTALLP 322 (356)
T ss_dssp EEETTTCSEEEEEC
T ss_pred EEECCCCcEEEEec
Confidence 99999999998876
No 109
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.89 E-value=2.3e-21 Score=147.85 Aligned_cols=155 Identities=16% Similarity=0.207 Sum_probs=133.8
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccceehh
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTL 80 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~ 80 (166)
+..+..+++++.++.+++|+..... .....+.+|..+|.+++| +++.+++++.|+.|++||+.+++....+
T Consensus 106 s~~~~~l~~~~~dg~i~vw~~~~~~------~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 179 (814)
T 3mkq_A 106 HPTKPYVLSGSDDLTVKLWNWENNW------ALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL 179 (814)
T ss_dssp CSSSSEEEEEETTSEEEEEEGGGTS------EEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEE
T ss_pred eCCCCEEEEEcCCCEEEEEECCCCc------eEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEE
Confidence 3455678999999999999986542 233456789999999999 3568999999999999999988777776
Q ss_pred cCCC-CceEEEEEcC--CCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373 81 HGHC-GPITTLFIDG--VSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQ 155 (166)
Q Consensus 81 ~~~~-~~v~~~~~~~--~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~ 155 (166)
..+. ..+.+++|+| ++..+++++.||.+++||+++++.+..+.+|...|.+++|+| +.+++++.|+.|++||+.+
T Consensus 180 ~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~ 259 (814)
T 3mkq_A 180 TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSST 259 (814)
T ss_dssp ECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT
T ss_pred ecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 6554 8899999999 899999999999999999999999999999999999999999 4899999999999999999
Q ss_pred ccceeeeee
Q psy16373 156 GHLLSTIQL 164 (166)
Q Consensus 156 ~~~~~~~~~ 164 (166)
++.+..+..
T Consensus 260 ~~~~~~~~~ 268 (814)
T 3mkq_A 260 YKVEKTLNV 268 (814)
T ss_dssp CSEEEEECC
T ss_pred CcEEEEeec
Confidence 888776653
No 110
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.89 E-value=2.1e-21 Score=137.77 Aligned_cols=109 Identities=14% Similarity=0.118 Sum_probs=94.4
Q ss_pred cCcEEEEEecCCeEEEEEcccccc-----eehhcCCCCceEEEEEcC--------CCCEEEEecCCCcEEEEeCcCCeee
Q psy16373 53 VSNRVITGSQDHTLKVYKLEDQQL-----LFTLHGHCGPITTLFIDG--------VSMMSGSGSQDGLLCVWDTVTGACM 119 (166)
Q Consensus 53 ~~~~l~~~~~d~~v~v~~~~~~~~-----~~~~~~~~~~v~~~~~~~--------~~~~~~~~~~d~~v~~~d~~~~~~~ 119 (166)
.+.+|++++.|++|++||.++++. +..+.+|.+.|.+++|+| +++++++++.|++|++||++++.++
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~ 179 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI 179 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee
Confidence 445799999999999999987643 456789999999999987 6889999999999999999999888
Q ss_pred EEeecccccEEEEEEcCC---eEEEeecCCcEEEEECCcccceee
Q psy16373 120 YSIQAHDGCIHALTYSDS---YVISLGQDERLCVWDRFQGHLLST 161 (166)
Q Consensus 120 ~~~~~~~~~v~~i~~~~~---~l~~~~~d~~i~~wd~~~~~~~~~ 161 (166)
..+..|..++.+++|+|+ +|++++.|+.|++||+++++....
T Consensus 180 ~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~ 224 (393)
T 4gq1_A 180 LAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEE 224 (393)
T ss_dssp EEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----
T ss_pred eeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCccccc
Confidence 888889999999999983 799999999999999998876543
No 111
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=7.3e-21 Score=136.95 Aligned_cols=155 Identities=14% Similarity=0.126 Sum_probs=125.3
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c---CcEEEEEecCCeEEEEEcccccceeh
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V---SNRVITGSQDHTLKVYKLEDQQLLFT 79 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~---~~~l~~~~~d~~v~v~~~~~~~~~~~ 79 (166)
+.+..+++|+.++.+..|+........ .....+.+|...|.+++| + +.+|++++.|+.|++||+.+++.+..
T Consensus 159 p~~~~l~~~~~~g~v~~~~~~~~~~~~---~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~ 235 (450)
T 2vdu_B 159 EDDTTVIIADKFGDVYSIDINSIPEEK---FTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDK 235 (450)
T ss_dssp TTSSEEEEEETTSEEEEEETTSCCCSS---CCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEE
T ss_pred CCCCEEEEEeCCCcEEEEecCCccccc---ccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeee
Confidence 345678888889988888875433111 023356789999999999 5 67999999999999999999888776
Q ss_pred -hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecc-------------------------cccEEEEE
Q psy16373 80 -LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAH-------------------------DGCIHALT 133 (166)
Q Consensus 80 -~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~-------------------------~~~v~~i~ 133 (166)
+.+|...|.+++|+ ++.++++++.|+.|++||+++++.+..+..+ ...|..++
T Consensus 236 ~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 314 (450)
T 2vdu_B 236 WLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKII 314 (450)
T ss_dssp ECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEE
T ss_pred eecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEE
Confidence 56899999999999 9999999999999999999999988877632 34688999
Q ss_pred EcC--CeEEEee-cCCcEEEEEC--Ccc---cceeeee
Q psy16373 134 YSD--SYVISLG-QDERLCVWDR--FQG---HLLSTIQ 163 (166)
Q Consensus 134 ~~~--~~l~~~~-~d~~i~~wd~--~~~---~~~~~~~ 163 (166)
|+| .++++++ .|+.|++|++ .++ +.+..+.
T Consensus 315 ~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~ 352 (450)
T 2vdu_B 315 KSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIIT 352 (450)
T ss_dssp ECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEE
T ss_pred EeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEec
Confidence 998 4888888 8999999999 555 4444444
No 112
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.88 E-value=2.1e-21 Score=147.77 Aligned_cols=146 Identities=14% Similarity=0.223 Sum_probs=125.2
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c--CcEEEEEecCCeEEEEEccccc--ceehh
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V--SNRVITGSQDHTLKVYKLEDQQ--LLFTL 80 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~--~~~l~~~~~d~~v~v~~~~~~~--~~~~~ 80 (166)
+..+++|+.|+.+++|+..... ......+.+|..+|.+++| + ++.+++|+.|+.|++||+.++. ....+
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~~~~-----~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~ 141 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEENGR-----WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII 141 (753)
T ss_dssp CSEEEEEETTSCEEEEEEETTE-----EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCc-----ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEe
Confidence 6789999999999999976532 2244456789999999999 4 7899999999999999998873 34456
Q ss_pred cCCCCceEEEEEcC-------------CCCEEEEecCCCcEEEEeCcCC----eeeEEeecccccEEEEEEcCC-----e
Q psy16373 81 HGHCGPITTLFIDG-------------VSMMSGSGSQDGLLCVWDTVTG----ACMYSIQAHDGCIHALTYSDS-----Y 138 (166)
Q Consensus 81 ~~~~~~v~~~~~~~-------------~~~~~~~~~~d~~v~~~d~~~~----~~~~~~~~~~~~v~~i~~~~~-----~ 138 (166)
.+|...|.+++|+| ++..+++++.||.|++||++++ .....+.+|..+|++++|+|+ .
T Consensus 142 ~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~ 221 (753)
T 3jro_A 142 DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY 221 (753)
T ss_dssp ECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred ecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCE
Confidence 68999999999999 4899999999999999999877 556678889999999999975 7
Q ss_pred EEEeecCCcEEEEECCccc
Q psy16373 139 VISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 139 l~~~~~d~~i~~wd~~~~~ 157 (166)
+++++.|+.|++||+++++
T Consensus 222 l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 222 LASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp EEEEESSSCEEEEEESSSS
T ss_pred EEEEecCCEEEEecCCCCC
Confidence 9999999999999998864
No 113
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.88 E-value=2.6e-21 Score=135.54 Aligned_cols=146 Identities=16% Similarity=0.130 Sum_probs=113.7
Q ss_pred cCCCceEEEeeccccccee--------eceee-eeeeeccCCceEEEEe--cCcEEEEEecCCe-EEEEEcccccceehh
Q psy16373 13 GSAGSLLDFKKMQVEEEMT--------LTCCK-VESTRAHHQPITVLEC--VSNRVITGSQDHT-LKVYKLEDQQLLFTL 80 (166)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~-v~v~~~~~~~~~~~~ 80 (166)
|+.++.+++|+........ ....+ ...+.+|..+|.+++| ++.+|++|+.|++ |++||+++++.+..+
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~ 234 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREF 234 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEE
Confidence 7899999999986532110 00112 5567899999999999 8899999999998 999999999999998
Q ss_pred c-C-CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee--eEEee---------------------cccccEEEEEEc
Q psy16373 81 H-G-HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC--MYSIQ---------------------AHDGCIHALTYS 135 (166)
Q Consensus 81 ~-~-~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~--~~~~~---------------------~~~~~v~~i~~~ 135 (166)
. + |...|.+++|+|++.++++++.|+++++||++.... ...+. ....+...++|+
T Consensus 235 ~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 314 (355)
T 3vu4_A 235 RRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWI 314 (355)
T ss_dssp ECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEES
T ss_pred EcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEe
Confidence 8 5 999999999999999999999999999999975531 11110 011233668999
Q ss_pred CC--eEEEeecCCcEEEEECCcccc
Q psy16373 136 DS--YVISLGQDERLCVWDRFQGHL 158 (166)
Q Consensus 136 ~~--~l~~~~~d~~i~~wd~~~~~~ 158 (166)
++ .+++++.||.+++|++..++.
T Consensus 315 ~d~~~l~~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 315 SESSLVVVWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp SSSEEEEEETTTTEEEEEEEEEETT
T ss_pred CCCCEEEEEeCCCeEEEEEEEcCCC
Confidence 83 899999999999999877654
No 114
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.88 E-value=3.8e-21 Score=133.21 Aligned_cols=157 Identities=13% Similarity=0.151 Sum_probs=125.8
Q ss_pred eEEEEecCCCceEEEeeccccccee--eceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEccc-ccc--eehhc
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMT--LTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLED-QQL--LFTLH 81 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~-~~~--~~~~~ 81 (166)
+..+++++.++.+++|+........ ........+. |...|.+++|.++.+++++.|+.|++||+++ +.. .....
T Consensus 112 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 190 (342)
T 1yfq_A 112 DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEES 190 (342)
T ss_dssp TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEEC
T ss_pred CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeec
Confidence 5678899999999999986411100 0011222333 7889999999666699999999999999998 542 23344
Q ss_pred CCCCceEEEEEcC-CCCEEEEecCCCcEEEEeCcCC------eeeEEeecccc---------cEEEEEEcC--CeEEEee
Q psy16373 82 GHCGPITTLFIDG-VSMMSGSGSQDGLLCVWDTVTG------ACMYSIQAHDG---------CIHALTYSD--SYVISLG 143 (166)
Q Consensus 82 ~~~~~v~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~------~~~~~~~~~~~---------~v~~i~~~~--~~l~~~~ 143 (166)
.|...+.+++|+| ++..+++++.||.+++|+++.. +....+..|.. .|.+++|+| .+|++++
T Consensus 191 ~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~ 270 (342)
T 1yfq_A 191 GLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG 270 (342)
T ss_dssp SCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE
T ss_pred CCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEec
Confidence 6788999999999 9999999999999999999876 77788887765 999999998 5899999
Q ss_pred cCCcEEEEECCcccceeeeee
Q psy16373 144 QDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 144 ~d~~i~~wd~~~~~~~~~~~~ 164 (166)
.|+.|++||+++++.+..+..
T Consensus 271 ~dg~i~vwd~~~~~~~~~~~~ 291 (342)
T 1yfq_A 271 SDGIISCWNLQTRKKIKNFAK 291 (342)
T ss_dssp TTSCEEEEETTTTEEEEECCC
T ss_pred CCceEEEEcCccHhHhhhhhc
Confidence 999999999999998877654
No 115
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.88 E-value=2e-21 Score=141.68 Aligned_cols=142 Identities=11% Similarity=0.036 Sum_probs=116.5
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCC-----ceEEEEe--cCcEEEEEecCCeEEEEEcccccc
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQ-----PITVLEC--VSNRVITGSQDHTLKVYKLEDQQL 76 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~ 76 (166)
++.+..+++++.++.+++|+.+. ....+. |.. .+.+++| ++++|++|+.||.|++||+.++..
T Consensus 94 SPdG~~LAs~s~dg~V~iwd~~~---------~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l 163 (588)
T 2j04_A 94 SPIDDWMAVLSNNGNVSVFKDNK---------MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSE 163 (588)
T ss_dssp CSSSSCEEEEETTSCEEEEETTE---------EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTT
T ss_pred CCCCCEEEEEeCCCcEEEEeCCc---------eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcc
Confidence 56778899999999999998432 222334 444 5999999 999999999999999999998753
Q ss_pred -------eehh----cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee---eEEe-ecccccEEEEEEcCCeEEE
Q psy16373 77 -------LFTL----HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC---MYSI-QAHDGCIHALTYSDSYVIS 141 (166)
Q Consensus 77 -------~~~~----~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~---~~~~-~~~~~~v~~i~~~~~~l~~ 141 (166)
+..+ .+|...|.+++|+|++ +++++.|+++++||+..+.. ...+ .+|...|.+++|+...+++
T Consensus 164 ~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~~LAS 241 (588)
T 2j04_A 164 NTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDYKVVL 241 (588)
T ss_dssp TCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETTEEEE
T ss_pred ccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEECCEEEE
Confidence 4555 5678899999999999 78888999999999987763 3456 3788899999999667887
Q ss_pred eecCCcEEEEECCcccc
Q psy16373 142 LGQDERLCVWDRFQGHL 158 (166)
Q Consensus 142 ~~~d~~i~~wd~~~~~~ 158 (166)
++ ++.|++||+.+++.
T Consensus 242 a~-~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 242 TC-PGYVHKIDLKNYSI 257 (588)
T ss_dssp EC-SSEEEEEETTTTEE
T ss_pred Ee-CCeEEEEECCCCeE
Confidence 76 79999999987766
No 116
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.88 E-value=2.7e-20 Score=132.95 Aligned_cols=154 Identities=18% Similarity=0.310 Sum_probs=131.0
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccc-cceehhcC
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQ-QLLFTLHG 82 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~-~~~~~~~~ 82 (166)
+..+.++++|+.|+.+++|+..... .+..+.+|...+.++++++..|++|+.|+.+++||.... ..+..+.+
T Consensus 156 spdg~~lasgs~Dg~v~iWd~~~~~-------~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~ 228 (420)
T 4gga_A 156 IKEGNYLAVGTSSAEVQLWDVQQQK-------RLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSG 228 (420)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTE-------EEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEEC
T ss_pred CCCCCEEEEEECCCeEEEEEcCCCc-------EEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEecc
Confidence 4456789999999999999986543 345677999999999999999999999999999999864 45567788
Q ss_pred CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe----eeEEeecccccEEEEEEcC---CeEEE--eecCCcEEEEEC
Q psy16373 83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA----CMYSIQAHDGCIHALTYSD---SYVIS--LGQDERLCVWDR 153 (166)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~----~~~~~~~~~~~v~~i~~~~---~~l~~--~~~d~~i~~wd~ 153 (166)
|...+..+.++|++..+++++.|+.+++|+..+++ .+.....|...|.+++|+| ..+++ ++.|+.|++||+
T Consensus 229 h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~ 308 (420)
T 4gga_A 229 HSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNV 308 (420)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEET
T ss_pred cccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeC
Confidence 99999999999999999999999999999998764 3556677889999999998 35555 457999999999
Q ss_pred Ccccceeeeee
Q psy16373 154 FQGHLLSTIQL 164 (166)
Q Consensus 154 ~~~~~~~~~~~ 164 (166)
++++++..+..
T Consensus 309 ~t~~~~~~~~~ 319 (420)
T 4gga_A 309 CSGACLSAVDA 319 (420)
T ss_dssp TTTEEEEEEEC
T ss_pred Cccccceeecc
Confidence 99998877664
No 117
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=2.8e-21 Score=138.77 Aligned_cols=120 Identities=10% Similarity=0.054 Sum_probs=102.2
Q ss_pred ccCCceEEEEe--cCcEEE----EEecCCeEEEEEcccc--------cc---eehhcCCCCceEEEEEcCC-CCEEEEec
Q psy16373 42 AHHQPITVLEC--VSNRVI----TGSQDHTLKVYKLEDQ--------QL---LFTLHGHCGPITTLFIDGV-SMMSGSGS 103 (166)
Q Consensus 42 ~~~~~i~~~~~--~~~~l~----~~~~d~~v~v~~~~~~--------~~---~~~~~~~~~~v~~~~~~~~-~~~~~~~~ 103 (166)
.+...|.+++| ++++|+ +++.|+.|++||+.+. +. ...+.+|...|.+++|+|+ +.++++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 45678999999 788888 7888999999999765 11 3455678999999999998 88999999
Q ss_pred CCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeee
Q psy16373 104 QDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTI 162 (166)
Q Consensus 104 ~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~ 162 (166)
.||+|++||++++..+....+|...|.+++|+| .+|++++.|+.|++||++ ++....+
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~ 229 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVI 229 (434)
T ss_dssp TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEE
T ss_pred CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Ccccccc
Confidence 999999999999877777777899999999998 599999999999999998 4444433
No 118
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.88 E-value=5.7e-21 Score=151.45 Aligned_cols=126 Identities=19% Similarity=0.279 Sum_probs=118.2
Q ss_pred eeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC
Q psy16373 38 ESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT 115 (166)
Q Consensus 38 ~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 115 (166)
..+.+|...|++++| ++.++++|+.|+.|++||+.+++.+..+.+|...|.+++|+|++.++++++.|+.|++||+.+
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~ 688 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSAT 688 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCC
Confidence 356789999999999 889999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeeeEEeecccccEEEEEEcC--C--eEEEeecCCcEEEEECCcccceeeee
Q psy16373 116 GACMYSIQAHDGCIHALTYSD--S--YVISLGQDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 116 ~~~~~~~~~~~~~v~~i~~~~--~--~l~~~~~d~~i~~wd~~~~~~~~~~~ 163 (166)
++.+..+.+|...|.+++|+| + .+++++.|+.|++||+++++.+..+.
T Consensus 689 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~ 740 (1249)
T 3sfz_A 689 GKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMF 740 (1249)
T ss_dssp CCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEEC
T ss_pred CceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheec
Confidence 999999999999999999987 2 78999999999999999998877664
No 119
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.88 E-value=1.6e-20 Score=132.63 Aligned_cols=151 Identities=16% Similarity=0.251 Sum_probs=124.7
Q ss_pred ceEEEEecCCCceEEEeecccccceeece-eee-----eeeeccCCceEEEEe---cCcEEEEEecCCeEEEEEcccccc
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTC-CKV-----ESTRAHHQPITVLEC---VSNRVITGSQDHTLKVYKLEDQQL 76 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----~~~~~~~~~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~ 76 (166)
.+..+++|+.++.+++|+........... ... ....+|..+|.+++| ++.+|++++.|+.|++||+.+++.
T Consensus 55 ~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 134 (408)
T 4a11_B 55 EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQT 134 (408)
T ss_dssp TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCcc
Confidence 56789999999999999987544222111 110 011358999999999 456899999999999999999888
Q ss_pred eehhcCCCCceEEEEEcCC---CCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC---eEEEeecCCcEEE
Q psy16373 77 LFTLHGHCGPITTLFIDGV---SMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS---YVISLGQDERLCV 150 (166)
Q Consensus 77 ~~~~~~~~~~v~~~~~~~~---~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~---~l~~~~~d~~i~~ 150 (166)
...+. +...+.++.+.|. +..+++++.|+.+++||+++++.+..+..|...|.+++|+|+ .+++++.|+.|++
T Consensus 135 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i 213 (408)
T 4a11_B 135 ADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKL 213 (408)
T ss_dssp EEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred ceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEE
Confidence 77766 7788999999885 459999999999999999999999999999999999999983 5889999999999
Q ss_pred EECCccc
Q psy16373 151 WDRFQGH 157 (166)
Q Consensus 151 wd~~~~~ 157 (166)
||++++.
T Consensus 214 ~d~~~~~ 220 (408)
T 4a11_B 214 WDVRRAS 220 (408)
T ss_dssp EETTCSS
T ss_pred EECCCCC
Confidence 9998765
No 120
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.87 E-value=8.5e-21 Score=138.36 Aligned_cols=150 Identities=9% Similarity=0.067 Sum_probs=116.0
Q ss_pred ccceEEEEecCCCceEEEeeccccccee--------e-------------c-eeeeeeee-ccCCceEEEEe--cCcEEE
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMT--------L-------------T-CCKVESTR-AHHQPITVLEC--VSNRVI 58 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~-------------~-~~~~~~~~-~~~~~i~~~~~--~~~~l~ 58 (166)
+..+..+|+++.|+.++ +........ . . ......+. .|...|.+++| +|..|+
T Consensus 24 SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LA 101 (588)
T 2j04_A 24 ARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMA 101 (588)
T ss_dssp CTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEE
T ss_pred CCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEE
Confidence 56788999999999996 222111000 0 0 00001122 45788999999 899999
Q ss_pred EEecCCeEEEEEcccccceehhcCCCC-----ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe-------eeEEe----
Q psy16373 59 TGSQDHTLKVYKLEDQQLLFTLHGHCG-----PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA-------CMYSI---- 122 (166)
Q Consensus 59 ~~~~d~~v~v~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~-------~~~~~---- 122 (166)
+++.||.|++||.+. .+..+. |.. .+.+++|+|+|+++++|+.||+|++||+++++ .+..+
T Consensus 102 s~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~ 178 (588)
T 2j04_A 102 VLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSD 178 (588)
T ss_dssp EEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSC
T ss_pred EEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeeccc
Confidence 999999999999654 555556 655 49999999999999999999999999999875 35666
Q ss_pred ecccccEEEEEEcCCeEEEeecCCcEEEEECCcccc
Q psy16373 123 QAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHL 158 (166)
Q Consensus 123 ~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~ 158 (166)
.+|...|.+++|+|+.+++++.|+.+++||+..+..
T Consensus 179 ~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~ 214 (588)
T 2j04_A 179 AGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSH 214 (588)
T ss_dssp TTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSS
T ss_pred ccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCcc
Confidence 567789999999996699999999999999987773
No 121
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.87 E-value=3.5e-20 Score=130.34 Aligned_cols=144 Identities=7% Similarity=-0.018 Sum_probs=114.7
Q ss_pred EEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccccccee--hhcCCCC
Q psy16373 10 LRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF--TLHGHCG 85 (166)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~--~~~~~~~ 85 (166)
+++++.|+.+++|+..... ....+ .|...|.+++| ++.++++++.+ .+.+|+..+++.+. ....|..
T Consensus 150 ~as~~~d~~i~iwd~~~~~-------~~~~~-~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~ 220 (365)
T 4h5i_A 150 IASSKVPAIMRIIDPSDLT-------EKFEI-ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNW 220 (365)
T ss_dssp EEESCSSCEEEEEETTTTE-------EEEEE-ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTE
T ss_pred EEECCCCCEEEEeECCCCc-------EEEEe-CCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCC
Confidence 4577789999999986543 12233 46778999999 78889888754 56677776665543 3456888
Q ss_pred ceEEEEEcCCCCEEEEecCCC----cEEEEeCcCCee----eEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCc
Q psy16373 86 PITTLFIDGVSMMSGSGSQDG----LLCVWDTVTGAC----MYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQ 155 (166)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~d~----~v~~~d~~~~~~----~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~ 155 (166)
.|.+++|+|++..+++++.|+ .++.|++..... ...+.+|..+|++++|+| .+|++|+.|+.|++||+++
T Consensus 221 ~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~ 300 (365)
T 4h5i_A 221 SLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKD 300 (365)
T ss_dssp EEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT
T ss_pred CEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC
Confidence 999999999999999998887 688899876643 345678889999999999 4899999999999999999
Q ss_pred ccceeee
Q psy16373 156 GHLLSTI 162 (166)
Q Consensus 156 ~~~~~~~ 162 (166)
++++.++
T Consensus 301 ~~~~~~~ 307 (365)
T 4h5i_A 301 LSMSKIF 307 (365)
T ss_dssp TEEEEEE
T ss_pred CcEEEEe
Confidence 9988765
No 122
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.86 E-value=9.3e-20 Score=124.98 Aligned_cols=143 Identities=15% Similarity=0.222 Sum_probs=119.7
Q ss_pred EEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCc
Q psy16373 9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGP 86 (166)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~ 86 (166)
.|++| .|+.|++|+....+ ......+.+|...|.+++| ++++|++|+.|+.|++||+++++.+..+.+|...
T Consensus 38 ~lAvg-~D~tV~iWd~~tg~-----~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~ 111 (318)
T 4ggc_A 38 VLAVA-LDNSVYLWSASSGD-----ILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSAR 111 (318)
T ss_dssp EEEEE-ETTEEEEEETTTCC-----EEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred EEEEE-eCCEEEEEECCCCC-----EEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccce
Confidence 45555 47889999976543 1222344578889999999 8899999999999999999999999999999998
Q ss_pred eEEEEEcCCCCEEEEecCCCcEEEEeCcCC-eeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373 87 ITTLFIDGVSMMSGSGSQDGLLCVWDTVTG-ACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL 159 (166)
Q Consensus 87 v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~-~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~ 159 (166)
+.++... +..+++++.++.+++|+.... ..+..+.+|...+..+.+.+ ..+++++.|+.|++||+++++..
T Consensus 112 ~~~~~~~--~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~ 185 (318)
T 4ggc_A 112 VGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG 185 (318)
T ss_dssp EEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTB
T ss_pred EEEeecC--CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCccc
Confidence 8877664 578999999999999998865 56677888999999999987 58999999999999999987643
No 123
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.85 E-value=1.2e-20 Score=135.30 Aligned_cols=151 Identities=14% Similarity=0.153 Sum_probs=116.5
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--c-CcEEEEEecCCeEEEEEcccccceehh-
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--V-SNRVITGSQDHTLKVYKLEDQQLLFTL- 80 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~-~~~l~~~~~d~~v~v~~~~~~~~~~~~- 80 (166)
..+.++++|+.++.+++|+.... .+..+.+|...|.+++| + ..++++|+.|+.|++||+++.+....+
T Consensus 219 ~~~~~l~~g~~dg~i~~wd~~~~--------~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~ 290 (435)
T 4e54_B 219 ASSRMVVTGDNVGNVILLNMDGK--------ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFL 290 (435)
T ss_dssp TTTTEEEEECSSSBEEEEESSSC--------BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCS
T ss_pred CCCCEEEEEeCCCcEeeeccCcc--------eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEE
Confidence 34568999999999999997532 23456789999999999 3 347889999999999999887654333
Q ss_pred --cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccc------cEEEEEEcC--CeEEEee-------
Q psy16373 81 --HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDG------CIHALTYSD--SYVISLG------- 143 (166)
Q Consensus 81 --~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~------~v~~i~~~~--~~l~~~~------- 143 (166)
.+|...|++++|+|++.++++++.|+.|++||++++.....+..|.. .+....|++ +.++++.
T Consensus 291 ~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 370 (435)
T 4e54_B 291 YSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFK 370 (435)
T ss_dssp BCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSC
T ss_pred EeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeE
Confidence 56899999999999999999999999999999999887777655432 122344554 2333332
Q ss_pred -----cCCcEEEEECCcccceeeee
Q psy16373 144 -----QDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 144 -----~d~~i~~wd~~~~~~~~~~~ 163 (166)
.++.|++||..+++.+.++.
T Consensus 371 ~~~~~~~~~i~iwd~~~g~~~~~l~ 395 (435)
T 4e54_B 371 SCTPYELRTIDVFDGNSGKMMCQLY 395 (435)
T ss_dssp CSSTTCCCCEEEECSSSCCEEEEEC
T ss_pred EEEecCCCEEEEEECCCCcEEEEEe
Confidence 34679999999998877653
No 124
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.84 E-value=2e-19 Score=129.21 Aligned_cols=150 Identities=9% Similarity=0.033 Sum_probs=113.3
Q ss_pred ceEEEE----ecCCCceEEEeecccccce----eeceeeeeeeeccCCceEEEEe--c-CcEEEEEecCCeEEEEEcccc
Q psy16373 6 HRIHLR----TGSAGSLLDFKKMQVEEEM----TLTCCKVESTRAHHQPITVLEC--V-SNRVITGSQDHTLKVYKLEDQ 74 (166)
Q Consensus 6 ~~~~~~----~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~--~-~~~l~~~~~d~~v~v~~~~~~ 74 (166)
.+..++ +|+.|+.+++|+....... .........+.+|...|.+++| + +++|++++.|+.|++||++++
T Consensus 103 dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~ 182 (434)
T 2oit_A 103 DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET 182 (434)
T ss_dssp TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS
T ss_pred CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC
Confidence 345666 8999999999998653100 0011123455689999999999 3 678999999999999999988
Q ss_pred cceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecc-------cccEEEEEEcCC-eEE--Eeec
Q psy16373 75 QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAH-------DGCIHALTYSDS-YVI--SLGQ 144 (166)
Q Consensus 75 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~-------~~~v~~i~~~~~-~l~--~~~~ 144 (166)
.......+|...|.+++|+|++.++++|+.||.|++||++ ++....+..| ...|.++.|+++ .++ ..+.
T Consensus 183 ~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~ 261 (434)
T 2oit_A 183 VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAA 261 (434)
T ss_dssp EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEET
T ss_pred cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccC
Confidence 7666666788999999999999999999999999999998 5555555433 338899999984 222 2333
Q ss_pred CC------cEEEEECCcc
Q psy16373 145 DE------RLCVWDRFQG 156 (166)
Q Consensus 145 d~------~i~~wd~~~~ 156 (166)
|| .+++|++++.
T Consensus 262 dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 262 DGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TCCSSSCCEEEEEECCCT
T ss_pred CCccCCCCceEEEEeccC
Confidence 43 3899999865
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.83 E-value=8e-19 Score=125.28 Aligned_cols=155 Identities=13% Similarity=0.049 Sum_probs=125.8
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCC
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH 83 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~ 83 (166)
.+.++++++.++.+.+|+....+.. .......+.+|...|.+++| ++.++++++.|+.|++||+++++.+..+..|
T Consensus 133 ~~~~~~~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~ 210 (433)
T 3bws_A 133 NTRLAIPLLEDEGMDVLDINSGQTV--RLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLT 210 (433)
T ss_dssp SSEEEEEBTTSSSEEEEETTTCCEE--EECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECS
T ss_pred CCeEEEEeCCCCeEEEEECCCCeEe--eecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCC
Confidence 5678888888998999987654321 11112234578899999999 7888999999999999999999888888889
Q ss_pred CCceEEEEEcCCCCEE-EEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEee--------cCCcEEEEE
Q psy16373 84 CGPITTLFIDGVSMMS-GSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLG--------QDERLCVWD 152 (166)
Q Consensus 84 ~~~v~~~~~~~~~~~~-~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~--------~d~~i~~wd 152 (166)
...+.+++|+|++..+ ++++.|+.|++||+++++.+..+..+ ..+..++|+| +.+++++ .|+.|++||
T Consensus 211 ~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d 289 (433)
T 3bws_A 211 GKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYS 289 (433)
T ss_dssp SSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEE
T ss_pred CCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEE
Confidence 9999999999998877 55568999999999999988887754 4589999998 3777777 488999999
Q ss_pred CCcccceeeee
Q psy16373 153 RFQGHLLSTIQ 163 (166)
Q Consensus 153 ~~~~~~~~~~~ 163 (166)
+++++.+..+.
T Consensus 290 ~~~~~~~~~~~ 300 (433)
T 3bws_A 290 MDKEKLIDTIG 300 (433)
T ss_dssp TTTTEEEEEEE
T ss_pred CCCCcEEeecc
Confidence 99888776553
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.83 E-value=5.8e-18 Score=119.37 Aligned_cols=148 Identities=8% Similarity=0.091 Sum_probs=118.8
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEE-EEEecCCeEEEEEcccccceehhcCC
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRV-ITGSQDHTLKVYKLEDQQLLFTLHGH 83 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l-~~~~~d~~v~v~~~~~~~~~~~~~~~ 83 (166)
++++++++.++.+++|+....+ ....+..|. .+.+++| +++.+ ++++.|+.|++||+.+++.+..+..+
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~-------~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~ 73 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNK-------VTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAG 73 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTE-------EEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECS
T ss_pred CEEEEEcCCCCEEEEEECCCCe-------EEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECC
Confidence 5789999999999999976442 223344454 4789999 67666 67778999999999999888887755
Q ss_pred CCceEEEEEcCCCCEEE-EecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eE-EEeecCCcEEEEECCcccce
Q psy16373 84 CGPITTLFIDGVSMMSG-SGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YV-ISLGQDERLCVWDRFQGHLL 159 (166)
Q Consensus 84 ~~~v~~~~~~~~~~~~~-~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l-~~~~~d~~i~~wd~~~~~~~ 159 (166)
. .+.+++|+|+++.++ +++.++.|++||+++++.+..+..+ ..+.+++|+|+ .+ ++++.|+.|++||+++++.+
T Consensus 74 ~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 151 (391)
T 1l0q_A 74 S-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI 151 (391)
T ss_dssp S-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE
T ss_pred C-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE
Confidence 5 899999999998774 5567799999999999988887754 56789999984 55 67778999999999999887
Q ss_pred eeeee
Q psy16373 160 STIQL 164 (166)
Q Consensus 160 ~~~~~ 164 (166)
..+..
T Consensus 152 ~~~~~ 156 (391)
T 1l0q_A 152 NTVSV 156 (391)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 76654
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.77 E-value=1.3e-16 Score=113.78 Aligned_cols=150 Identities=9% Similarity=0.029 Sum_probs=120.1
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEE-EEecCCeEEEEEcccccceehhc
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVI-TGSQDHTLKVYKLEDQQLLFTLH 81 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~-~~~~d~~v~v~~~~~~~~~~~~~ 81 (166)
..+..+++++.++.+.+|+..... ....+..|...+.+++| +++.++ +++.|+.|++||+++++.+..+.
T Consensus 179 ~~~~~~~s~~~d~~v~~~d~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~ 251 (433)
T 3bws_A 179 EHNELWVSQMQANAVHVFDLKTLA-------YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD 251 (433)
T ss_dssp GGTEEEEEEGGGTEEEEEETTTCC-------EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC
T ss_pred CCCEEEEEECCCCEEEEEECCCce-------EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec
Confidence 356788999999999999975432 23345578889999999 666664 55579999999999988877776
Q ss_pred CCCCceEEEEEcCCCCEEEEec--------CCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC---eEEEeecCCcEEE
Q psy16373 82 GHCGPITTLFIDGVSMMSGSGS--------QDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS---YVISLGQDERLCV 150 (166)
Q Consensus 82 ~~~~~v~~~~~~~~~~~~~~~~--------~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~---~l~~~~~d~~i~~ 150 (166)
.+ ..+.+++++|++..+++++ .|+.|++||+++++.+..+ .+...+..++|+|+ .+++++.|+.|++
T Consensus 252 ~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v 329 (433)
T 3bws_A 252 KI-GLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEV 329 (433)
T ss_dssp CC-SEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEE
T ss_pred CC-CCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEE
Confidence 54 4589999999999988887 5889999999998877665 35668889999983 4566688999999
Q ss_pred EECCcccceeeee
Q psy16373 151 WDRFQGHLLSTIQ 163 (166)
Q Consensus 151 wd~~~~~~~~~~~ 163 (166)
||+.+++.+..+.
T Consensus 330 ~d~~~~~~~~~~~ 342 (433)
T 3bws_A 330 YDLKEKKVQKSIP 342 (433)
T ss_dssp EETTTTEEEEEEE
T ss_pred EECCCCcEEEEec
Confidence 9999988877665
No 128
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.77 E-value=2.8e-16 Score=110.78 Aligned_cols=147 Identities=12% Similarity=0.088 Sum_probs=114.5
Q ss_pred EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEE-EEecCCeEEEEEcccccceehhcCCC
Q psy16373 8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVI-TGSQDHTLKVYKLEDQQLLFTLHGHC 84 (166)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~-~~~~d~~v~v~~~~~~~~~~~~~~~~ 84 (166)
.++++++.++.+.+|+....+ ....+..+. .+.+++| +++.|+ +++.++.|++||+.+++.+..+..+
T Consensus 45 ~l~~~~~~d~~i~v~d~~~~~-------~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~- 115 (391)
T 1l0q_A 45 KVYVANAHSNDVSIIDTATNN-------VIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG- 115 (391)
T ss_dssp EEEEEEGGGTEEEEEETTTTE-------EEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-
T ss_pred EEEEECCCCCeEEEEECCCCe-------EEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-
Confidence 455788888999999875432 222333333 8899999 677665 5556799999999999887777644
Q ss_pred CceEEEEEcCCCCEE-EEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eE-EEeecCCcEEEEECCccccee
Q psy16373 85 GPITTLFIDGVSMMS-GSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YV-ISLGQDERLCVWDRFQGHLLS 160 (166)
Q Consensus 85 ~~v~~~~~~~~~~~~-~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l-~~~~~d~~i~~wd~~~~~~~~ 160 (166)
..+.+++|+|+++.+ ++++.++.|++||+++++.+..+..+ ..+..++|+|+ .+ ++++.|+.|++||+++++.+.
T Consensus 116 ~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 116 KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE
Confidence 568999999999877 78888999999999999988888765 45689999983 55 567788999999999988776
Q ss_pred eeee
Q psy16373 161 TIQL 164 (166)
Q Consensus 161 ~~~~ 164 (166)
.+..
T Consensus 195 ~~~~ 198 (391)
T 1l0q_A 195 TVKV 198 (391)
T ss_dssp EEEC
T ss_pred EEec
Confidence 6643
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.67 E-value=3.2e-14 Score=101.62 Aligned_cols=132 Identities=10% Similarity=-0.010 Sum_probs=104.1
Q ss_pred ceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCC---eEEEEEcccccceehhcCCCCceEEEE
Q psy16373 17 SLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDH---TLKVYKLEDQQLLFTLHGHCGPITTLF 91 (166)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~---~v~v~~~~~~~~~~~~~~~~~~v~~~~ 91 (166)
+.+.+|+.... ....+.+|...+.+++| +++.|++++.++ .|++||+.+++.. .+..|...+.+++
T Consensus 159 ~~i~i~d~~g~--------~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~ 229 (415)
T 2hqs_A 159 YELRVSDYDGY--------NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPA 229 (415)
T ss_dssp EEEEEEETTSC--------SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEE
T ss_pred ceEEEEcCCCC--------CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEE
Confidence 68888887532 12355678889999999 888999999875 9999999988764 4566888899999
Q ss_pred EcCCCCEEE-EecCCCc--EEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEeec-CC--cEEEEECCcccc
Q psy16373 92 IDGVSMMSG-SGSQDGL--LCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLGQ-DE--RLCVWDRFQGHL 158 (166)
Q Consensus 92 ~~~~~~~~~-~~~~d~~--v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~-d~--~i~~wd~~~~~~ 158 (166)
|+|+++.++ +++.++. |++||+++++. ..+..|...+..++|+|+ .|++++. ++ .|.+||+.+++.
T Consensus 230 ~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~ 303 (415)
T 2hqs_A 230 FSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP 303 (415)
T ss_dssp ECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC
T ss_pred EcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE
Confidence 999999887 6666654 99999988775 566778889999999984 6777765 44 688889887764
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.62 E-value=1.8e-13 Score=100.95 Aligned_cols=146 Identities=7% Similarity=0.042 Sum_probs=116.4
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeee-ccCCceEEEEe--cCcEEEEEecCCeEEEEEc--ccccceeh
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR-AHHQPITVLEC--VSNRVITGSQDHTLKVYKL--EDQQLLFT 79 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~--~~~~~~~~ 79 (166)
..+..+++++.++.+.+|+....+ .+.++. ++. +.++++ ++++|++++.|+.|.+||+ .+++.+.+
T Consensus 147 p~~~~~vs~~~d~~V~v~D~~t~~-------~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~ 217 (543)
T 1nir_A 147 LPNLFSVTLRDAGQIALVDGDSKK-------IVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE 217 (543)
T ss_dssp GGGEEEEEEGGGTEEEEEETTTCC-------EEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred CCCEEEEEEcCCCeEEEEECCCce-------EEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEE
Confidence 456788999999999999865433 233444 333 778888 8899999999999999999 78888877
Q ss_pred hcCCCCceEEEEEcC----CCCEEEEecC-CCcEEEEeCcCCeeeEEeecc----------cc-cEEEEEEcCC---eEE
Q psy16373 80 LHGHCGPITTLFIDG----VSMMSGSGSQ-DGLLCVWDTVTGACMYSIQAH----------DG-CIHALTYSDS---YVI 140 (166)
Q Consensus 80 ~~~~~~~v~~~~~~~----~~~~~~~~~~-d~~v~~~d~~~~~~~~~~~~~----------~~-~v~~i~~~~~---~l~ 140 (166)
+. +...+..++|+| +++++++++. +++|.+||..+++++..+..+ .. .+..+.++++ +++
T Consensus 218 i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~v 296 (543)
T 1nir_A 218 IK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIV 296 (543)
T ss_dssp EE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEE
T ss_pred Ee-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEE
Confidence 77 455679999999 9999988874 899999999999998887642 22 6888999872 677
Q ss_pred EeecCCcEEEEECCccccee
Q psy16373 141 SLGQDERLCVWDRFQGHLLS 160 (166)
Q Consensus 141 ~~~~d~~i~~wd~~~~~~~~ 160 (166)
+...++.|.+||..+.+.+.
T Consensus 297 s~~~~g~i~vvd~~~~~~l~ 316 (543)
T 1nir_A 297 NVKETGKVLLVNYKDIDNLT 316 (543)
T ss_dssp EETTTTEEEEEECTTSSSCE
T ss_pred EECCCCeEEEEEecCCCcce
Confidence 77789999999998876554
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.61 E-value=2.1e-13 Score=97.39 Aligned_cols=145 Identities=13% Similarity=0.014 Sum_probs=106.6
Q ss_pred ccceEEEEecCCCc---eEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEE-EEecCC--eEEEEEccccc
Q psy16373 4 SVHRIHLRTGSAGS---LLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVI-TGSQDH--TLKVYKLEDQQ 75 (166)
Q Consensus 4 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~-~~~~d~--~v~v~~~~~~~ 75 (166)
++.+..++.++.++ .+.+|+...... ..+..|...+.+++| +++.|+ +++.++ .|.+||+.+++
T Consensus 187 Spdg~~la~~s~~~~~~~i~~~d~~tg~~--------~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~ 258 (415)
T 2hqs_A 187 SPDGSKLAYVTFESGRSALVIQTLANGAV--------RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ 258 (415)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETTTCCE--------EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred cCCCCEEEEEEecCCCcEEEEEECCCCcE--------EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC
Confidence 34455667666654 788888754321 134567778999999 777777 666555 49999998876
Q ss_pred ceehhcCCCCceEEEEEcCCCCEEEEecC-CC--cEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecC---Cc
Q psy16373 76 LLFTLHGHCGPITTLFIDGVSMMSGSGSQ-DG--LLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQD---ER 147 (166)
Q Consensus 76 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~--~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d---~~ 147 (166)
. ..+..|...+.+++|+|+++.++.++. ++ .+.+||+.+++. ..+..+...+..++|+| ++|++++.+ ..
T Consensus 259 ~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~ 336 (415)
T 2hqs_A 259 I-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQH 336 (415)
T ss_dssp E-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEE
T ss_pred E-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceE
Confidence 5 556678889999999999998887775 44 677889887764 34555667888999999 467777654 58
Q ss_pred EEEEECCcccc
Q psy16373 148 LCVWDRFQGHL 158 (166)
Q Consensus 148 i~~wd~~~~~~ 158 (166)
|.+||+.+++.
T Consensus 337 i~~~d~~~~~~ 347 (415)
T 2hqs_A 337 IAKQDLATGGV 347 (415)
T ss_dssp EEEEETTTCCE
T ss_pred EEEEECCCCCE
Confidence 99999988765
No 132
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.59 E-value=9.6e-13 Score=91.27 Aligned_cols=150 Identities=13% Similarity=0.071 Sum_probs=112.2
Q ss_pred EEEEecCCCceEEEeecccccceeeceeeeeeeeccC---------CceEEEEe--cCcEEEEEe--cCCeEEEEEcccc
Q psy16373 8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHH---------QPITVLEC--VSNRVITGS--QDHTLKVYKLEDQ 74 (166)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~i~~~~~--~~~~l~~~~--~d~~v~v~~~~~~ 74 (166)
..++++..++.+.+|+...... ...+..+. ..+.++.+ +++.++.++ .++.|.+||..++
T Consensus 102 ~l~v~~~~~~~v~~~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~ 174 (353)
T 3vgz_A 102 TLWFGNTVNSAVTAIDAKTGEV-------KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI 174 (353)
T ss_dssp EEEEEETTTTEEEEEETTTCCE-------EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT
T ss_pred EEEEEecCCCEEEEEeCCCCee-------EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC
Confidence 4666777777888887654331 11222211 12677888 677777665 4789999999999
Q ss_pred cceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec----ccccEEEEEEcC--CeEEEeec-CCc
Q psy16373 75 QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA----HDGCIHALTYSD--SYVISLGQ-DER 147 (166)
Q Consensus 75 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~----~~~~v~~i~~~~--~~l~~~~~-d~~ 147 (166)
+....+..+...+.+++++|+++.+++++.++.+.+||+.+++.+..+.. +...+..++|+| +.++.++. ++.
T Consensus 175 ~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 254 (353)
T 3vgz_A 175 KLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAE 254 (353)
T ss_dssp EEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSE
T ss_pred ceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCE
Confidence 88877775666688999999999999999999999999999988877654 445678899998 35655554 589
Q ss_pred EEEEECCcccceeeeee
Q psy16373 148 LCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 148 i~~wd~~~~~~~~~~~~ 164 (166)
|.+||..+++.+..+..
T Consensus 255 v~~~d~~~~~~~~~~~~ 271 (353)
T 3vgz_A 255 VLVVDTRNGNILAKVAA 271 (353)
T ss_dssp EEEEETTTCCEEEEEEC
T ss_pred EEEEECCCCcEEEEEEc
Confidence 99999999998877764
No 133
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.56 E-value=3e-13 Score=93.32 Aligned_cols=147 Identities=12% Similarity=0.134 Sum_probs=103.8
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecC-CeEEEEEcc--ccc--ce
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQD-HTLKVYKLE--DQQ--LL 77 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d-~~v~v~~~~--~~~--~~ 77 (166)
.+++.+++++.++.+.+|+....... ..... ..+...+.+++| ++++|++++.+ +.|.+|++. +++ .+
T Consensus 3 ~~~~l~~~~~~~~~v~~~~~~~~~~~----~~~~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~ 77 (343)
T 1ri6_A 3 LKQTVYIASPESQQIHVWNLNHEGAL----TLTQV-VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFA 77 (343)
T ss_dssp CEEEEEEEEGGGTEEEEEEECTTSCE----EEEEE-EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE
T ss_pred ceEEEEEeCCCCCeEEEEEECCCCcE----EEeee-EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeec
Confidence 45677788788899999987532211 11111 245667888888 78888888876 999999997 443 33
Q ss_pred ehhcCCCCceEEEEEcCCCCEEEEec-CCCcEEEEeCc---CCeeeEEeecccccEEEEEEcCC--eEEEee-cCCcEEE
Q psy16373 78 FTLHGHCGPITTLFIDGVSMMSGSGS-QDGLLCVWDTV---TGACMYSIQAHDGCIHALTYSDS--YVISLG-QDERLCV 150 (166)
Q Consensus 78 ~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~v~~~d~~---~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~-~d~~i~~ 150 (166)
..+..+. .+..++|+|+++.+++++ .++.+.+||+. ..+.+..+.. ...+..++|+|+ .+++++ .++.|.+
T Consensus 78 ~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~~ 155 (343)
T 1ri6_A 78 AESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICL 155 (343)
T ss_dssp EEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEE
T ss_pred cccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC-CCCceEEEECCCCCEEEEecCCCCEEEE
Confidence 4444333 788999999999776554 58899999994 4444555543 345788999983 677776 7999999
Q ss_pred EECCc-ccc
Q psy16373 151 WDRFQ-GHL 158 (166)
Q Consensus 151 wd~~~-~~~ 158 (166)
||+.+ ++.
T Consensus 156 ~d~~~~~~~ 164 (343)
T 1ri6_A 156 FTVSDDGHL 164 (343)
T ss_dssp EEECTTSCE
T ss_pred EEecCCCce
Confidence 99987 543
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.56 E-value=2e-12 Score=89.12 Aligned_cols=145 Identities=7% Similarity=-0.025 Sum_probs=106.3
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEec-CCeEEEEEcccccc-eehh
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQ-DHTLKVYKLEDQQL-LFTL 80 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~-d~~v~v~~~~~~~~-~~~~ 80 (166)
..+..+++++.++.+.+|+....+. ...+..+.... ++++ +++++++++. ++.|.+||..+++. ...+
T Consensus 8 ~~~~~~v~~~~~~~v~~~d~~~~~~-------~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~ 79 (331)
T 3u4y_A 8 TSNFGIVVEQHLRRISFFSTDTLEI-------LNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAI 79 (331)
T ss_dssp CCCEEEEEEGGGTEEEEEETTTCCE-------EEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEE
T ss_pred CCCEEEEEecCCCeEEEEeCcccce-------eeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEec
Confidence 4567788899999999998754431 11222334455 8888 6776666655 89999999999887 6666
Q ss_pred cCCCCceEEEEEcCCCCEEEEecCCC---cEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEe-ecCCc-EEEEEC
Q psy16373 81 HGHCGPITTLFIDGVSMMSGSGSQDG---LLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISL-GQDER-LCVWDR 153 (166)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~~~~~~~d~---~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~-~~d~~-i~~wd~ 153 (166)
..+..+..+++++|++++++++..++ .+.+||+.+++.+..+..+ .....++|+|+ +++++ ..++. |.+|++
T Consensus 80 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~ 158 (331)
T 3u4y_A 80 QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKI 158 (331)
T ss_dssp EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEE
T ss_pred ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEE
Confidence 66666666699999999988665553 8999999999888877653 45589999994 45555 45588 999998
Q ss_pred Ccccc
Q psy16373 154 FQGHL 158 (166)
Q Consensus 154 ~~~~~ 158 (166)
.....
T Consensus 159 ~~~g~ 163 (331)
T 3u4y_A 159 DADGV 163 (331)
T ss_dssp CTTCC
T ss_pred CCCCc
Confidence 75443
No 135
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.52 E-value=5.5e-13 Score=98.32 Aligned_cols=110 Identities=7% Similarity=-0.018 Sum_probs=95.0
Q ss_pred cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeC--cCCeeeEEeecccccEE
Q psy16373 53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT--VTGACMYSIQAHDGCIH 130 (166)
Q Consensus 53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~--~~~~~~~~~~~~~~~v~ 130 (166)
++..+++++.|++|.+||..+++.+..+..+.. +..++++|+++++++++.|+.|.+||+ .+++.+..+.. ...+.
T Consensus 148 ~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~~p~ 225 (543)
T 1nir_A 148 PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GIEAR 225 (543)
T ss_dssp GGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CSEEE
T ss_pred CCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CCCcc
Confidence 677888889999999999999999888874333 889999999999999999999999999 88888888874 45678
Q ss_pred EEEEcC----C--eEEEeec-CCcEEEEECCcccceeeeee
Q psy16373 131 ALTYSD----S--YVISLGQ-DERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 131 ~i~~~~----~--~l~~~~~-d~~i~~wd~~~~~~~~~~~~ 164 (166)
.++|+| + ++++++. ++.|.+||..+++++.++..
T Consensus 226 ~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~ 266 (543)
T 1nir_A 226 SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVST 266 (543)
T ss_dssp EEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEEC
T ss_pred eEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecc
Confidence 999998 5 7777774 89999999999999888764
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.52 E-value=3.3e-12 Score=88.59 Aligned_cols=142 Identities=14% Similarity=0.058 Sum_probs=103.5
Q ss_pred CCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC----CCCce
Q psy16373 14 SAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG----HCGPI 87 (166)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~----~~~~v 87 (166)
..++.+.+|+..... ....+..+...+.++++ +++.+++++.++.+.+||..+++....+.. +...+
T Consensus 161 ~~~~~i~~~d~~~~~-------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 233 (353)
T 3vgz_A 161 GKESVIWVVDGGNIK-------LKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFF 233 (353)
T ss_dssp SSSCEEEEEETTTTE-------EEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCE
T ss_pred CCCceEEEEcCCCCc-------eEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCccc
Confidence 345666666654322 22233333444667777 788999999999999999999887766653 45567
Q ss_pred EEEEEcCCCCEEEEec-CCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEee-cCCcEEEEECCcccceeeee
Q psy16373 88 TTLFIDGVSMMSGSGS-QDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLG-QDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 88 ~~~~~~~~~~~~~~~~-~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~~~~~~~~~~ 163 (166)
..++++|+++.++.++ .++.+.+||+.+++.+..+..... ..++|+| +.++.++ .++.|.+||..+++.+..+.
T Consensus 234 ~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~ 311 (353)
T 3vgz_A 234 INISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFD 311 (353)
T ss_dssp EEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEe
Confidence 8899999988665554 458999999999988887765332 4688888 3455555 68999999999998887776
Q ss_pred e
Q psy16373 164 L 164 (166)
Q Consensus 164 ~ 164 (166)
.
T Consensus 312 ~ 312 (353)
T 3vgz_A 312 T 312 (353)
T ss_dssp C
T ss_pred c
Confidence 4
No 137
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.52 E-value=1e-12 Score=92.77 Aligned_cols=149 Identities=11% Similarity=0.038 Sum_probs=106.9
Q ss_pred ccceEEEEecCCCceEEEeecccccce----eeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceeh
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEM----TLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFT 79 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~ 79 (166)
++++.++++|+.++++. |+....... .....+.. ...+.. |..++|+++.|+++ .++.|++||+.+......
T Consensus 46 s~~~gll~a~~~~~l~v-~~~~~l~~~~~~~~~~~~~~~-~~~lp~-V~~l~fd~~~L~v~-~~~~l~v~dv~sl~~~~~ 121 (388)
T 1xip_A 46 SNSKSLFVAASGSKAVV-GELQLLRDHITSDSTPLTFKW-EKEIPD-VIFVCFHGDQVLVS-TRNALYSLDLEELSEFRT 121 (388)
T ss_dssp ETTTTEEEEEETTEEEE-EEHHHHHHHHHSSSCCCCCSE-EEECTT-EEEEEEETTEEEEE-ESSEEEEEESSSTTCEEE
T ss_pred cCCCCEEEEeCCCEEEE-EEhhHhhhhhccccccccceE-EeeCCC-eeEEEECCCEEEEE-cCCcEEEEEchhhhccCc
Confidence 45566778888887777 554322200 00011111 123555 99999988889988 889999999987665555
Q ss_pred hcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccc-
Q psy16373 80 LHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHL- 158 (166)
Q Consensus 80 ~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~- 158 (166)
...|...+.++.+.+. .+++++.||.+.+||++++.... +...|++++|+|+-++.+..||.+++|+...++.
T Consensus 122 ~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG~~vg~~dg~i~~~~~~~~~~~ 195 (388)
T 1xip_A 122 VTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQLAVLLKDRSFQSFAWRNGEME 195 (388)
T ss_dssp EEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSEEEEEETTSCEEEEEEETTEEE
T ss_pred cceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCceEEEEcCCcEEEEcCCCcccc
Confidence 5667777888776543 38888999999999999776543 4568999999997788999999999998876664
Q ss_pred -eeee
Q psy16373 159 -LSTI 162 (166)
Q Consensus 159 -~~~~ 162 (166)
..++
T Consensus 196 ~k~~I 200 (388)
T 1xip_A 196 KQFEF 200 (388)
T ss_dssp EEEEE
T ss_pred cccee
Confidence 4444
No 138
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.51 E-value=2.8e-12 Score=86.49 Aligned_cols=115 Identities=15% Similarity=0.085 Sum_probs=88.7
Q ss_pred ceEEEEe--cCcEEE-EEecCCeEEEEEccc-ccceehhcCCCCceEEEEEcCCCCEEEEec-CCCcEEEEeCc-CCeee
Q psy16373 46 PITVLEC--VSNRVI-TGSQDHTLKVYKLED-QQLLFTLHGHCGPITTLFIDGVSMMSGSGS-QDGLLCVWDTV-TGACM 119 (166)
Q Consensus 46 ~i~~~~~--~~~~l~-~~~~d~~v~v~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~v~~~d~~-~~~~~ 119 (166)
.+.+++| +++.|+ +++.++.+.+|++.. ......+..+...+.+++|+|+++.++.++ .++.+.+|++. .+..+
T Consensus 130 ~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~ 209 (297)
T 2ojh_A 130 PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSV 209 (297)
T ss_dssp SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCE
T ss_pred CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCc
Confidence 4788888 677666 788899999999643 233455566778899999999999877655 58899999886 55666
Q ss_pred EEeecccccEEEEEEcC--CeEEEeecC-----------CcEEEEECCccccee
Q psy16373 120 YSIQAHDGCIHALTYSD--SYVISLGQD-----------ERLCVWDRFQGHLLS 160 (166)
Q Consensus 120 ~~~~~~~~~v~~i~~~~--~~l~~~~~d-----------~~i~~wd~~~~~~~~ 160 (166)
..+..+...+..+.|+| .+|++++.+ +.|.+||+.+++...
T Consensus 210 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~ 263 (297)
T 2ojh_A 210 ERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVET 263 (297)
T ss_dssp EECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEE
T ss_pred EEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCcee
Confidence 77777888899999998 467777665 569999998876543
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.48 E-value=5.2e-12 Score=86.88 Aligned_cols=76 Identities=13% Similarity=0.037 Sum_probs=63.9
Q ss_pred eEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373 87 ITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 87 v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
+.+++++|++++++++ ++.+.+||+.+++.+..+.. ...+.+++|+| +.+++++.++.|.+||+.+++.+..+..
T Consensus 243 ~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 243 YFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp EEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred eeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 4568999999988887 79999999999988877764 34567899998 4788888899999999999999888875
Q ss_pred c
Q psy16373 165 Q 165 (166)
Q Consensus 165 ~ 165 (166)
+
T Consensus 320 ~ 320 (337)
T 1pby_B 320 P 320 (337)
T ss_dssp G
T ss_pred C
Confidence 4
No 140
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.48 E-value=3.1e-12 Score=88.06 Aligned_cols=147 Identities=13% Similarity=0.008 Sum_probs=106.3
Q ss_pred EEEEecCCCceEEEeecccccceeeceeeeeeee-ccCC-ceEEEEe--cCcEE-EEEecCCeEEEEEcccccceehhcC
Q psy16373 8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR-AHHQ-PITVLEC--VSNRV-ITGSQDHTLKVYKLEDQQLLFTLHG 82 (166)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~i~~~~~--~~~~l-~~~~~d~~v~v~~~~~~~~~~~~~~ 82 (166)
..+++++.++.+.+|+....+ ....+. ++.. .+.++++ +++.+ +++..++.|.+||+.+++.+..+..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~-------~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~ 74 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMA-------VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDL 74 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTE-------EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEEC
T ss_pred cEEEEcCCCCeEEEEECCCCc-------EEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEc
Confidence 367888888899998875432 112222 2211 3667778 66555 5556679999999999887766553
Q ss_pred C-----CCceEEEEEcCCCCEEEEec------------CCCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEee
Q psy16373 83 H-----CGPITTLFIDGVSMMSGSGS------------QDGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLG 143 (166)
Q Consensus 83 ~-----~~~v~~~~~~~~~~~~~~~~------------~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~ 143 (166)
. ...+..++++|+++.++++. .++.+.+||+.+++.+..+.. ...+..++|+|+ .++++
T Consensus 75 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~- 152 (337)
T 1pby_B 75 STPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL- 152 (337)
T ss_dssp CBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE-
T ss_pred CCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe-
Confidence 2 12567899999998888875 579999999999888877764 445778899983 56666
Q ss_pred cCCcEEEEECCcccceeeeee
Q psy16373 144 QDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 144 ~d~~i~~wd~~~~~~~~~~~~ 164 (166)
++.|.+||+.+++.+..+..
T Consensus 153 -~~~i~~~d~~~~~~~~~~~~ 172 (337)
T 1pby_B 153 -GRDLHVMDPEAGTLVEDKPI 172 (337)
T ss_dssp -SSSEEEEETTTTEEEEEECS
T ss_pred -CCeEEEEECCCCcEeeeeec
Confidence 68899999999887766543
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.46 E-value=2.5e-12 Score=97.61 Aligned_cols=99 Identities=15% Similarity=0.045 Sum_probs=77.2
Q ss_pred ceEEEEe--cCcEEEEEecCCeEEEEEccccc--ceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373 46 PITVLEC--VSNRVITGSQDHTLKVYKLEDQQ--LLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS 121 (166)
Q Consensus 46 ~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~ 121 (166)
.+.+++| ++++|++++. +.|.+||+.+++ ....+..+...+..++|+|+|+.++.++ ++.|++||+.+++....
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQL 187 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEEC
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEe
Confidence 3677888 8888998886 999999999873 4456667888899999999999999886 56899999998876654
Q ss_pred eeccccc----------------EEEEEEcCC--eEEEeecCC
Q psy16373 122 IQAHDGC----------------IHALTYSDS--YVISLGQDE 146 (166)
Q Consensus 122 ~~~~~~~----------------v~~i~~~~~--~l~~~~~d~ 146 (166)
...+... +..++|+|+ .|++++.|+
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 4433332 467999994 788877665
No 142
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.46 E-value=4.1e-12 Score=87.89 Aligned_cols=76 Identities=12% Similarity=-0.007 Sum_probs=62.7
Q ss_pred eEEEEEcC-CCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeee
Q psy16373 87 ITTLFIDG-VSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 87 v~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~ 163 (166)
+.+++++| +++.++++ ++.+.+||+++++.+..+.. ...+..++|+| +.|++++.++.|.+||.++++.+..++
T Consensus 257 ~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~ 333 (349)
T 1jmx_B 257 YFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIK 333 (349)
T ss_dssp EEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEE
T ss_pred ceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeee
Confidence 45667789 99888887 88999999999988877764 34567899998 377778889999999999999998887
Q ss_pred ec
Q psy16373 164 LQ 165 (166)
Q Consensus 164 ~~ 165 (166)
++
T Consensus 334 ~~ 335 (349)
T 1jmx_B 334 LP 335 (349)
T ss_dssp CS
T ss_pred cC
Confidence 65
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.46 E-value=3.8e-11 Score=82.69 Aligned_cols=149 Identities=8% Similarity=0.024 Sum_probs=100.8
Q ss_pred EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCC---eEEEEEcccccceehhcC
Q psy16373 8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDH---TLKVYKLEDQQLLFTLHG 82 (166)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~---~v~v~~~~~~~~~~~~~~ 82 (166)
.+++++..++.+..|+...... ....+..+..+..++++ ++++++++..++ .|.+||+.+++.+..+..
T Consensus 53 ~l~~~~~~~~~i~~~d~~~~~~------~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~ 126 (331)
T 3u4y_A 53 NVVVTSDFCQTLVQIETQLEPP------KVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI 126 (331)
T ss_dssp EEEEEESTTCEEEEEECSSSSC------EEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC
T ss_pred EEEEEeCCCCeEEEEECCCCce------eEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC
Confidence 4556666577777777654331 12334455556655777 788888655553 899999999888777664
Q ss_pred CCCceEEEEEcCCCCEEE-EecCCCc-EEEEeCcCCeee----EEeecccccEEEEEEcCC--eEEEee-cCCcEEEEEC
Q psy16373 83 HCGPITTLFIDGVSMMSG-SGSQDGL-LCVWDTVTGACM----YSIQAHDGCIHALTYSDS--YVISLG-QDERLCVWDR 153 (166)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~-~~~~d~~-v~~~d~~~~~~~----~~~~~~~~~v~~i~~~~~--~l~~~~-~d~~i~~wd~ 153 (166)
.....+++|+|++++++ +...++. +.+|++.....+ ............++|+|+ +++.++ .++.|.+||+
T Consensus 127 -~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~ 205 (331)
T 3u4y_A 127 -PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILET 205 (331)
T ss_dssp -CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred -CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEEC
Confidence 34568999999987554 4456678 999998754322 111223455788999983 455544 6889999999
Q ss_pred Ccccc---eeeee
Q psy16373 154 FQGHL---LSTIQ 163 (166)
Q Consensus 154 ~~~~~---~~~~~ 163 (166)
.+++. +..+.
T Consensus 206 ~~~~~~~~~~~~~ 218 (331)
T 3u4y_A 206 QNPENITLLNAVG 218 (331)
T ss_dssp SSTTSCEEEEEEE
T ss_pred CCCcccceeeecc
Confidence 99988 66554
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.45 E-value=1.5e-12 Score=98.49 Aligned_cols=148 Identities=5% Similarity=-0.123 Sum_probs=104.8
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCC---ceEEEEe--cCcEEEEEecC---------CeEEEEEc
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQ---PITVLEC--VSNRVITGSQD---------HTLKVYKL 71 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~--~~~~l~~~~~d---------~~v~v~~~ 71 (166)
.+.++++ +.++.+.+|+...... ...+.+|.. .|.+++| ++++|++++.+ +.+.+||+
T Consensus 27 dg~~~~~-~~dg~i~~~d~~~g~~-------~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~ 98 (723)
T 1xfd_A 27 DTEFIYR-EQKGTVRLWNVETNTS-------TVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKI 98 (723)
T ss_dssp SSCBCCC-CSSSCEEEBCGGGCCC-------EEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEES
T ss_pred CCcEEEE-eCCCCEEEEECCCCcE-------EEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEEC
Confidence 3444555 6677888888765432 122334443 4888888 88999998764 78889999
Q ss_pred ccccc--eehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccE------------------EE
Q psy16373 72 EDQQL--LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCI------------------HA 131 (166)
Q Consensus 72 ~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v------------------~~ 131 (166)
.+++. +.....|...+..++|+|+|+.++.++. +.|++||+.+++.......+...+ ..
T Consensus 99 ~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~ 177 (723)
T 1xfd_A 99 PHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIA 177 (723)
T ss_dssp SSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEE
T ss_pred CCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcce
Confidence 98865 2222345556889999999999998875 799999999887766555433333 78
Q ss_pred EEEcCC--eEEEeecCC----------------------------------cEEEEECCcccceeee
Q psy16373 132 LTYSDS--YVISLGQDE----------------------------------RLCVWDRFQGHLLSTI 162 (166)
Q Consensus 132 i~~~~~--~l~~~~~d~----------------------------------~i~~wd~~~~~~~~~~ 162 (166)
++|+|+ .|++++.|+ .|++||+.+++....+
T Consensus 178 ~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l 244 (723)
T 1xfd_A 178 HWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEM 244 (723)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEEC
T ss_pred EEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEe
Confidence 999994 777776543 7999999888754433
No 145
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.45 E-value=1.7e-12 Score=96.18 Aligned_cols=138 Identities=9% Similarity=0.028 Sum_probs=103.1
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecC----CeEEEEEcccccceehh
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQD----HTLKVYKLEDQQLLFTL 80 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d----~~v~v~~~~~~~~~~~~ 80 (166)
+..+++++.++.. +|+...... ..+..+.. .+++| +|+.|++++.+ ..|.+||+.+++.. .+
T Consensus 123 ~~~~~s~~~~~~~-l~d~~~g~~--------~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l 190 (582)
T 3o4h_A 123 AVVFTGATEDRVA-LYALDGGGL--------RELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VF 190 (582)
T ss_dssp CEEEEEECSSCEE-EEEEETTEE--------EEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EE
T ss_pred eEEEEecCCCCce-EEEccCCcE--------EEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-Ee
Confidence 3566677777666 565533221 11222222 56666 89999988877 78999999887754 56
Q ss_pred cCCCCceEEEEEcCCCCEEEEecCCC--cEEEEeCcCCeeeEEeecccccEEEEE--------EcCC--eEEEeecCCcE
Q psy16373 81 HGHCGPITTLFIDGVSMMSGSGSQDG--LLCVWDTVTGACMYSIQAHDGCIHALT--------YSDS--YVISLGQDERL 148 (166)
Q Consensus 81 ~~~~~~v~~~~~~~~~~~~~~~~~d~--~v~~~d~~~~~~~~~~~~~~~~v~~i~--------~~~~--~l~~~~~d~~i 148 (166)
..|...+..++|+|+|+.++++..++ .|++||+.+++.. .+..|...+..++ |+|+ .+++++.|+.+
T Consensus 191 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~ 269 (582)
T 3o4h_A 191 DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRS 269 (582)
T ss_dssp CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEE
T ss_pred ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcE
Confidence 77888899999999999999888888 8999999988877 6666766666666 9984 77888899999
Q ss_pred EEEECCcccce
Q psy16373 149 CVWDRFQGHLL 159 (166)
Q Consensus 149 ~~wd~~~~~~~ 159 (166)
++|++ ++.+
T Consensus 270 ~l~~~--g~~~ 278 (582)
T 3o4h_A 270 AVFID--GERV 278 (582)
T ss_dssp EEEET--TEEE
T ss_pred EEEEE--CCee
Confidence 99998 5443
No 146
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.45 E-value=1e-11 Score=83.70 Aligned_cols=134 Identities=9% Similarity=-0.039 Sum_probs=95.4
Q ss_pred EEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccc-ccceehhcCC-CC
Q psy16373 10 LRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLED-QQLLFTLHGH-CG 85 (166)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~-~~~~~~~~~~-~~ 85 (166)
...++.++.+.+|+..... ...+..|...+.+++| ++++|++++ ++.|.+||+.+ ++.......+ ..
T Consensus 15 ~~~~~~~~~i~~~d~~~~~--------~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~ 85 (297)
T 2ojh_A 15 GPGGSMRSSIEIFNIRTRK--------MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATI 85 (297)
T ss_dssp ---CCCCEEEEEEETTTTE--------EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCC
T ss_pred cCCCCcceeEEEEeCCCCc--------eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccc
Confidence 3455678889888875433 1134467889999999 788888876 78999999998 7776665555 36
Q ss_pred ceEEEEEcCCCCEEEEec--CCCcEEEE--eCcCCeeeEEeecccccEEEEEEcCC--eEE-EeecCCcEEEEECC
Q psy16373 86 PITTLFIDGVSMMSGSGS--QDGLLCVW--DTVTGACMYSIQAHDGCIHALTYSDS--YVI-SLGQDERLCVWDRF 154 (166)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~--~d~~v~~~--d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~-~~~~d~~i~~wd~~ 154 (166)
.+.+++|+|+++.+++++ .++...+| +..+++ ...+..+ ..+..++|+|+ .++ ++..|+.+.+|++.
T Consensus 86 ~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~ 159 (297)
T 2ojh_A 86 CNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIYSMD 159 (297)
T ss_dssp BCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEEEEE
T ss_pred cccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCCCCEEEEEECCCCceEEEEEE
Confidence 788999999999999988 33445555 544444 3444433 35888999983 454 77889999999853
No 147
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.44 E-value=1.8e-11 Score=84.35 Aligned_cols=142 Identities=9% Similarity=0.102 Sum_probs=93.3
Q ss_pred EEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEec-CCeEEEEEc---ccccceehhcC
Q psy16373 9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQ-DHTLKVYKL---EDQQLLFTLHG 82 (166)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~-d~~v~v~~~---~~~~~~~~~~~ 82 (166)
+++++..++.+.+|+....... ......+..+. .+.+++| +++++++++. ++.|.+||+ ...+....+..
T Consensus 52 l~~~~~~~~~v~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 127 (343)
T 1ri6_A 52 LYVGVRPEFRVLAYRIAPDDGA---LTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEG 127 (343)
T ss_dssp EEEEETTTTEEEEEEECTTTCC---EEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECC
T ss_pred EEEeecCCCeEEEEEecCCCCc---eeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccC
Confidence 4444444488888887522110 11222333333 6778888 7777766654 889999999 44444444443
Q ss_pred CCCceEEEEEcCCCCEEEEec-CCCcEEEEeCcC-CeeeE----Eeec-ccccEEEEEEcCC--eEEEee-cCCcEEEEE
Q psy16373 83 HCGPITTLFIDGVSMMSGSGS-QDGLLCVWDTVT-GACMY----SIQA-HDGCIHALTYSDS--YVISLG-QDERLCVWD 152 (166)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~~~~-~d~~v~~~d~~~-~~~~~----~~~~-~~~~v~~i~~~~~--~l~~~~-~d~~i~~wd 152 (166)
...+.+++|+|+++.+++++ .++.+.+||+.+ ++... .+.. ....+..++|+|+ .++.++ .++.|.+||
T Consensus 128 -~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~ 206 (343)
T 1ri6_A 128 -LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWE 206 (343)
T ss_dssp -CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred -CCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 34588999999998777776 889999999987 54322 2222 2346788999983 555554 789999999
Q ss_pred CCc
Q psy16373 153 RFQ 155 (166)
Q Consensus 153 ~~~ 155 (166)
+..
T Consensus 207 ~~~ 209 (343)
T 1ri6_A 207 LKD 209 (343)
T ss_dssp SSC
T ss_pred ecC
Confidence 953
No 148
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.43 E-value=4.6e-12 Score=99.71 Aligned_cols=117 Identities=12% Similarity=0.081 Sum_probs=96.9
Q ss_pred eeccCC-ceEEEEe-cCcEEEEEecCCeEE-EEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCC
Q psy16373 40 TRAHHQ-PITVLEC-VSNRVITGSQDHTLK-VYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTG 116 (166)
Q Consensus 40 ~~~~~~-~i~~~~~-~~~~l~~~~~d~~v~-v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~ 116 (166)
+..|.. .+.+++| +++.|+.++.+..+. +|++.+++... +..|...+..++|+|+++.+++++.++.+++||+.++
T Consensus 332 ~~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg 410 (1045)
T 1k32_A 332 VPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG 410 (1045)
T ss_dssp CSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred ccCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCC
Confidence 345666 7888888 677888888888888 89998765443 3477788999999999999999999999999999999
Q ss_pred eeeEEeecccccEEEEEEcCC--eEEEeecCC----------cEEEEECCccc
Q psy16373 117 ACMYSIQAHDGCIHALTYSDS--YVISLGQDE----------RLCVWDRFQGH 157 (166)
Q Consensus 117 ~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~----------~i~~wd~~~~~ 157 (166)
+.......|...+..++|+|+ +|++++.++ .|++||+.+++
T Consensus 411 ~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 411 KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred ceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 887777788889999999994 677776644 89999998876
No 149
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.42 E-value=1.5e-11 Score=96.84 Aligned_cols=115 Identities=11% Similarity=0.040 Sum_probs=97.4
Q ss_pred eccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCC----------cE
Q psy16373 41 RAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDG----------LL 108 (166)
Q Consensus 41 ~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~----------~v 108 (166)
.+|...+.+++| +++.|++++.++.|++||+.+++....+..|...+.+++|+|++++++.++.++ .+
T Consensus 375 ~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i 454 (1045)
T 1k32_A 375 EENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAI 454 (1045)
T ss_dssp CCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEE
T ss_pred cCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeE
Confidence 367778999999 889999999999999999999887777667888999999999999998876644 89
Q ss_pred EEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcc
Q psy16373 109 CVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQG 156 (166)
Q Consensus 109 ~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~ 156 (166)
++||+.+++ +..+..|...+..++|+| ..|++++.++....|+....
T Consensus 455 ~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 455 HVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVL 503 (1045)
T ss_dssp EEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSS
T ss_pred EEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhcc
Confidence 999999887 666777888889999998 47888888888888876543
No 150
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.41 E-value=1.1e-11 Score=85.63 Aligned_cols=150 Identities=9% Similarity=-0.018 Sum_probs=104.5
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeeeccC-CceEEEEe--cCcEEE-EEecCCeEEEEEcccccceeh
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHH-QPITVLEC--VSNRVI-TGSQDHTLKVYKLEDQQLLFT 79 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~--~~~~l~-~~~~d~~v~v~~~~~~~~~~~ 79 (166)
+..+..+++++.++.+.+|+..... ....+..+. ..+..+++ +++.++ ++..++.|.+||+.+++....
T Consensus 8 ~~~~~~~v~~~~~~~v~~~d~~~~~-------~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~ 80 (349)
T 1jmx_B 8 KAGHEYMIVTNYPNNLHVVDVASDT-------VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH 80 (349)
T ss_dssp CTTCEEEEEEETTTEEEEEETTTTE-------EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cCCCEEEEEeCCCCeEEEEECCCCc-------EEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEE
Confidence 4456788888889999999875432 112222222 24567777 666554 555789999999998887766
Q ss_pred hcCCC------CceEEEEEcCCCCEEEEecCC------------CcEEEEeCcCCee---eEEeecccccEEEEEEcCC-
Q psy16373 80 LHGHC------GPITTLFIDGVSMMSGSGSQD------------GLLCVWDTVTGAC---MYSIQAHDGCIHALTYSDS- 137 (166)
Q Consensus 80 ~~~~~------~~v~~~~~~~~~~~~~~~~~d------------~~v~~~d~~~~~~---~~~~~~~~~~v~~i~~~~~- 137 (166)
+.... ..+..++++|+++++++++.+ +.+.+||+.+++. +..+.. ...+.+++|+|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg 159 (349)
T 1jmx_B 81 ANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDG 159 (349)
T ss_dssp EESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTS
T ss_pred EEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCC
Confidence 55322 237889999999999888765 8999999988533 333433 345788899983
Q ss_pred eEEEeecCCcEEEEECCcccceeeee
Q psy16373 138 YVISLGQDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 138 ~l~~~~~d~~i~~wd~~~~~~~~~~~ 163 (166)
.+++++ +.|.+||+.+++.+..+.
T Consensus 160 ~l~~~~--~~i~~~d~~~~~~~~~~~ 183 (349)
T 1jmx_B 160 SLYVAG--PDIYKMDVKTGKYTVALP 183 (349)
T ss_dssp CEEEES--SSEEEECTTTCCEEEEEC
T ss_pred cEEEcc--CcEEEEeCCCCceecccc
Confidence 455554 449999999998877654
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.41 E-value=6.2e-12 Score=95.15 Aligned_cols=153 Identities=8% Similarity=-0.035 Sum_probs=104.3
Q ss_pred ccceEEEEecCCC---------ceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcc
Q psy16373 4 SVHRIHLRTGSAG---------SLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLE 72 (166)
Q Consensus 4 ~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~ 72 (166)
++.+..+++++.+ +.+.+|+...... ..+....+|...+..++| +++.|+.++. +.|++||+.
T Consensus 69 SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-----~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~ 142 (723)
T 1xfd_A 69 SPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-----QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHV 142 (723)
T ss_dssp CTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-----EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSS
T ss_pred CCCCCEEEEEecCccceeecceeeEEEEECCCCce-----EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECC
Confidence 3445555655543 5666777654331 112222345555778888 8888998876 799999999
Q ss_pred cccceehhcCCCCc------------------eEEEEEcCCCCEEEEecCCC----------------------------
Q psy16373 73 DQQLLFTLHGHCGP------------------ITTLFIDGVSMMSGSGSQDG---------------------------- 106 (166)
Q Consensus 73 ~~~~~~~~~~~~~~------------------v~~~~~~~~~~~~~~~~~d~---------------------------- 106 (166)
+++.......+... +.+++|+|+++.++.++.++
T Consensus 143 ~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 222 (723)
T 1xfd_A 143 GKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAG 222 (723)
T ss_dssp SSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTT
T ss_pred CCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCC
Confidence 88765544443333 37899999999999886543
Q ss_pred ------cEEEEeCcCCeeeEEeecc------cccEEEEEEcCC--eEEEeec----CCcEEEEECCcccceeee
Q psy16373 107 ------LLCVWDTVTGACMYSIQAH------DGCIHALTYSDS--YVISLGQ----DERLCVWDRFQGHLLSTI 162 (166)
Q Consensus 107 ------~v~~~d~~~~~~~~~~~~~------~~~v~~i~~~~~--~l~~~~~----d~~i~~wd~~~~~~~~~~ 162 (166)
.+++||+.+++....+..+ ...+..++|+|+ .+++... +..|.+||+.+++....+
T Consensus 223 ~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~ 296 (723)
T 1xfd_A 223 SENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKH 296 (723)
T ss_dssp SCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEE
T ss_pred CCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEE
Confidence 7999999888765556543 567899999994 5545432 357999999988765543
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.37 E-value=3.3e-11 Score=91.09 Aligned_cols=134 Identities=13% Similarity=0.119 Sum_probs=97.6
Q ss_pred ceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEccc-----ccceehhcCCCCc---
Q psy16373 17 SLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLED-----QQLLFTLHGHCGP--- 86 (166)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~-----~~~~~~~~~~~~~--- 86 (166)
+.+.+|+..... ...+..+...+.+++| +++.|+.+ .++.|.+||+.+ ++.......+...
T Consensus 101 ~~i~~~d~~~~~--------~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~ 171 (706)
T 2z3z_A 101 GGLVGFDMLARK--------VTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVY 171 (706)
T ss_dssp TEEEEEETTTTE--------EEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEE
T ss_pred CEEEEEECCCCc--------eEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEc
Confidence 677777764332 1123345566777888 78888884 689999999998 7665544433332
Q ss_pred -----------eEEEEEcCCCCEEEEec---------------------------------CCCcEEEEeCcCCeeeEEe
Q psy16373 87 -----------ITTLFIDGVSMMSGSGS---------------------------------QDGLLCVWDTVTGACMYSI 122 (166)
Q Consensus 87 -----------v~~~~~~~~~~~~~~~~---------------------------------~d~~v~~~d~~~~~~~~~~ 122 (166)
+.+++|+|+++.+++++ .+..+++||+.+++.....
T Consensus 172 g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~ 251 (706)
T 2z3z_A 172 GQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQ 251 (706)
T ss_dssp SSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECC
T ss_pred ccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeec
Confidence 47899999999999887 4468999999988765443
Q ss_pred e--cccccEEEEEEcCC--eEEEeecCC-----cEEEEECCcccce
Q psy16373 123 Q--AHDGCIHALTYSDS--YVISLGQDE-----RLCVWDRFQGHLL 159 (166)
Q Consensus 123 ~--~~~~~v~~i~~~~~--~l~~~~~d~-----~i~~wd~~~~~~~ 159 (166)
. .|...+..++|+|+ .|++++.++ .|.+||+.+++..
T Consensus 252 ~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~ 297 (706)
T 2z3z_A 252 TGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFV 297 (706)
T ss_dssp CCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEE
T ss_pred cCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCcee
Confidence 2 45678899999994 688877765 8999999988433
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.37 E-value=3.9e-10 Score=78.71 Aligned_cols=150 Identities=8% Similarity=0.007 Sum_probs=95.4
Q ss_pred EEEEecCCCceEEEeecccccc------eeec-eeeeeeeeccCCceEEEEe--cCcEEEEEe-cCCeEEEEEcccccc-
Q psy16373 8 IHLRTGSAGSLLDFKKMQVEEE------MTLT-CCKVESTRAHHQPITVLEC--VSNRVITGS-QDHTLKVYKLEDQQL- 76 (166)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~~~~~~~~~~~~i~~~~~--~~~~l~~~~-~d~~v~v~~~~~~~~- 76 (166)
.+++++..++.+.+|+...... .... ...... ..+......++| +++++++++ .++.|.+|++.+++.
T Consensus 168 ~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~ 246 (361)
T 3scy_A 168 YLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFK-VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLD 246 (361)
T ss_dssp EEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE-CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEE
T ss_pred EEEEEeCCCCEEEEEEEcCCCCcccccceeeccccccee-cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceE
Confidence 3555666667777776654321 1100 001111 123445678888 777777776 689999999986643
Q ss_pred -eehh---cCCCCceEEEEEcCCCCEEEEecC--CCcEEEEeCc--CCe--eeEEeecccccEEEEEEcCC--eEEEee-
Q psy16373 77 -LFTL---HGHCGPITTLFIDGVSMMSGSGSQ--DGLLCVWDTV--TGA--CMYSIQAHDGCIHALTYSDS--YVISLG- 143 (166)
Q Consensus 77 -~~~~---~~~~~~v~~~~~~~~~~~~~~~~~--d~~v~~~d~~--~~~--~~~~~~~~~~~v~~i~~~~~--~l~~~~- 143 (166)
+..+ ..+......++|+|++++++++.. ++.+.+|++. +++ .+..+.. ...+..++|+|+ +|++++
T Consensus 247 ~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~ 325 (361)
T 3scy_A 247 EIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACR 325 (361)
T ss_dssp EEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEET
T ss_pred EeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEEC
Confidence 2222 233455789999999998866655 4899999985 444 3444444 456778999983 677777
Q ss_pred cCCcEEEE--ECCcccce
Q psy16373 144 QDERLCVW--DRFQGHLL 159 (166)
Q Consensus 144 ~d~~i~~w--d~~~~~~~ 159 (166)
.++.|.+| |..+++..
T Consensus 326 ~~~~v~v~~~d~~~g~~~ 343 (361)
T 3scy_A 326 DTNVIQIFERDQATGLLT 343 (361)
T ss_dssp TTTEEEEEEECTTTCCEE
T ss_pred CCCCEEEEEEECCCCcEe
Confidence 57889996 55566543
No 154
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.33 E-value=1.8e-11 Score=92.89 Aligned_cols=115 Identities=15% Similarity=0.100 Sum_probs=91.0
Q ss_pred CCceEEEEe--cCcEEEEEec-CC-----eEEEEEcccccceehhcCCC------------------------CceEEEE
Q psy16373 44 HQPITVLEC--VSNRVITGSQ-DH-----TLKVYKLEDQQLLFTLHGHC------------------------GPITTLF 91 (166)
Q Consensus 44 ~~~i~~~~~--~~~~l~~~~~-d~-----~v~v~~~~~~~~~~~~~~~~------------------------~~v~~~~ 91 (166)
...+.+++| ++++|++++. |+ .|.+||+.+++....+..+. ..+.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 346889999 8899999998 88 99999999887655444332 2378899
Q ss_pred EcCCCCEEEEecCCCcEEEEeCcCCe--eeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCccccee
Q psy16373 92 IDGVSMMSGSGSQDGLLCVWDTVTGA--CMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLLS 160 (166)
Q Consensus 92 ~~~~~~~~~~~~~d~~v~~~d~~~~~--~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~~~ 160 (166)
|+|+++.+++++. +.+++||+.++. .+..+..+...+..++|+|+ .|+.++ ++.|++||+.+++...
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~ 186 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQ 186 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEE
Confidence 9999999998876 899999998873 34556667788999999994 677666 5699999998876543
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.31 E-value=6.9e-10 Score=77.00 Aligned_cols=148 Identities=9% Similarity=0.040 Sum_probs=95.4
Q ss_pred EEEEecCCCceEEEeecccccceeeceeeeeeeec-cCCceEEEEe--cCcEEEE-EecCCeEEEEEccc--ccc--eeh
Q psy16373 8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRA-HHQPITVLEC--VSNRVIT-GSQDHTLKVYKLED--QQL--LFT 79 (166)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~--~~~~l~~-~~~d~~v~v~~~~~--~~~--~~~ 79 (166)
.+++++..++.+.+|+....... .....+.. .......++| +++++++ ...++.+.+|++.. ++. +..
T Consensus 153 ~l~v~~~~~~~v~~~~~~~~g~~----~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~ 228 (347)
T 3hfq_A 153 RLAVIDLGSDKVYVYNVSDAGQL----SEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGI 228 (347)
T ss_dssp CEEEEETTTTEEEEEEECTTSCE----EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEE
T ss_pred cEEEEeCCCCEEEEEEECCCCcE----EEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeee
Confidence 36666667777777776522211 11111121 2235667888 7776555 55689999999874 332 222
Q ss_pred hcCCC------CceEEEEEcCCCCEE-EEecCCCcEEEEeCcC---CeeeEEeecccccEEEEEEcCC--eEEEeec-CC
Q psy16373 80 LHGHC------GPITTLFIDGVSMMS-GSGSQDGLLCVWDTVT---GACMYSIQAHDGCIHALTYSDS--YVISLGQ-DE 146 (166)
Q Consensus 80 ~~~~~------~~v~~~~~~~~~~~~-~~~~~d~~v~~~d~~~---~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~-d~ 146 (166)
+.... ..+..++|+|+++++ ++...++.+.+|++.. .+.+..+..+...+..++|+|+ +|++++. ++
T Consensus 229 ~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 308 (347)
T 3hfq_A 229 VKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTD 308 (347)
T ss_dssp EESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTT
T ss_pred eeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCC
Confidence 22211 358899999999876 5566689999999872 2455555555666789999983 6777775 48
Q ss_pred cEEEE--ECCcccce
Q psy16373 147 RLCVW--DRFQGHLL 159 (166)
Q Consensus 147 ~i~~w--d~~~~~~~ 159 (166)
.|.+| |..+++..
T Consensus 309 ~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 309 NATLYARDLTSGKLS 323 (347)
T ss_dssp EEEEEEECTTTCCEE
T ss_pred cEEEEEEeCCCCeEE
Confidence 99999 55566654
No 156
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.31 E-value=3.1e-10 Score=78.78 Aligned_cols=139 Identities=13% Similarity=0.121 Sum_probs=88.6
Q ss_pred CCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEec---CCeEEEEEccccc--ceehhcCCCCc
Q psy16373 14 SAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQ---DHTLKVYKLEDQQ--LLFTLHGHCGP 86 (166)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~---d~~v~v~~~~~~~--~~~~~~~~~~~ 86 (166)
+.++-+.+|......... ... ....+......++| +++ |++++. ++.|.+|++.+++ .+..+..+...
T Consensus 13 ~~~~~i~v~~~d~~tg~~---~~~-~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~ 87 (347)
T 3hfq_A 13 KTSQGIYQGTLDTTAKTL---TND-GLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTP 87 (347)
T ss_dssp SSCCEEEEEEEETTTTEE---EEE-EEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCC
T ss_pred CCCCCEEEEEEcCCCCeE---EEe-eeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCC
Confidence 344556666665422111 111 12234455667888 666 665554 6899999997664 34444446677
Q ss_pred eEEEEEcCCCCEEEEec-CCCcEEEEeCc-CC--eeeEEeecc---------cccEEEEEEcC--CeEEEeecCCcEEEE
Q psy16373 87 ITTLFIDGVSMMSGSGS-QDGLLCVWDTV-TG--ACMYSIQAH---------DGCIHALTYSD--SYVISLGQDERLCVW 151 (166)
Q Consensus 87 v~~~~~~~~~~~~~~~~-~d~~v~~~d~~-~~--~~~~~~~~~---------~~~v~~i~~~~--~~l~~~~~d~~i~~w 151 (166)
+..++++|+++++++++ .++.+.+|++. ++ ..+..+... ...+..++|+| ..+++...++.|.+|
T Consensus 88 p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~ 167 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVY 167 (347)
T ss_dssp CSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred CEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEE
Confidence 88999999999887776 77899999996 33 333333221 12478899998 344444567889999
Q ss_pred ECC-ccc
Q psy16373 152 DRF-QGH 157 (166)
Q Consensus 152 d~~-~~~ 157 (166)
++. +++
T Consensus 168 ~~~~~g~ 174 (347)
T 3hfq_A 168 NVSDAGQ 174 (347)
T ss_dssp EECTTSC
T ss_pred EECCCCc
Confidence 998 443
No 157
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.31 E-value=1e-09 Score=74.19 Aligned_cols=143 Identities=13% Similarity=0.097 Sum_probs=96.2
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeee--ccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcC
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR--AHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHG 82 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~ 82 (166)
+.++++...++.+..++.... ....+. ++...+.++++ +++++++...++.|.+||.. ++.+..+..
T Consensus 132 g~l~v~~~~~~~i~~~~~~g~--------~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~ 202 (286)
T 1q7f_A 132 GRIIVVECKVMRVIIFDQNGN--------VLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGG 202 (286)
T ss_dssp SCEEEEETTTTEEEEECTTSC--------EEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESC
T ss_pred CCEEEEECCCCEEEEEcCCCC--------EEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEcc
Confidence 345555555555655553211 111121 34456788998 56666666778999999985 444444433
Q ss_pred C--CCceEEEEEcCCCCEEEEecCCC-cEEEEeCcCCeeeEEeecccc--cEEEEEEcC-CeEEEeecCCcEEEEECCcc
Q psy16373 83 H--CGPITTLFIDGVSMMSGSGSQDG-LLCVWDTVTGACMYSIQAHDG--CIHALTYSD-SYVISLGQDERLCVWDRFQG 156 (166)
Q Consensus 83 ~--~~~v~~~~~~~~~~~~~~~~~d~-~v~~~d~~~~~~~~~~~~~~~--~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~ 156 (166)
+ ...+..++++++++.+++...++ .|.+||. +++.+..+..+.. .+.+++++| ..++.++.|+.|++|+....
T Consensus 203 ~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 203 EGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLASKDYRLYIYRYVQL 281 (286)
T ss_dssp TTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEEETTTEEEEEECSCC
T ss_pred CCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEECCCCeEEEEEcccc
Confidence 2 35789999999999998887776 9999995 5666666654432 467899998 45555578999999998765
Q ss_pred cce
Q psy16373 157 HLL 159 (166)
Q Consensus 157 ~~~ 159 (166)
.++
T Consensus 282 ~pv 284 (286)
T 1q7f_A 282 APV 284 (286)
T ss_dssp CCT
T ss_pred ccc
Confidence 543
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.26 E-value=4.9e-09 Score=73.12 Aligned_cols=146 Identities=5% Similarity=0.065 Sum_probs=91.2
Q ss_pred EEEEecCCCceEEEeecccccceeeceeeeeeee--------ccCCceEEEEe--cCcEEEEEe-cCCeEEEEEcccccc
Q psy16373 8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR--------AHHQPITVLEC--VSNRVITGS-QDHTLKVYKLEDQQL 76 (166)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~~~--~~~~l~~~~-~d~~v~v~~~~~~~~ 76 (166)
.++++...++.+.+|+.......... ....... .+...+.+++| +++++++++ .++.|.+|++.....
T Consensus 111 ~l~~~~~~~~~v~~~~~~~~g~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~ 189 (361)
T 3scy_A 111 NIVTANYSGGSITVFPIGQDGALLPA-SDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNAN 189 (361)
T ss_dssp EEEEEETTTTEEEEEEBCTTSCBCSC-SEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCC
T ss_pred EEEEEECCCCEEEEEEeCCCCcCccc-ceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCC
Confidence 35555556778888887543211100 0000011 12234578888 777666555 489999999875431
Q ss_pred ------e-------ehhcCCCCceEEEEEcCCCCEEEEec-CCCcEEEEeCcCCee--eEEee---cccccEEEEEEcCC
Q psy16373 77 ------L-------FTLHGHCGPITTLFIDGVSMMSGSGS-QDGLLCVWDTVTGAC--MYSIQ---AHDGCIHALTYSDS 137 (166)
Q Consensus 77 ------~-------~~~~~~~~~v~~~~~~~~~~~~~~~~-~d~~v~~~d~~~~~~--~~~~~---~~~~~v~~i~~~~~ 137 (166)
+ ............++|+|+++++++++ .++.|.+||+.+++. +..+. .+......++|+|+
T Consensus 190 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spd 269 (361)
T 3scy_A 190 ADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPD 269 (361)
T ss_dssp TTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTT
T ss_pred cccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCC
Confidence 1 11122445678999999998776665 689999999987743 33332 22345679999983
Q ss_pred --eEEEeec--CCcEEEEECC
Q psy16373 138 --YVISLGQ--DERLCVWDRF 154 (166)
Q Consensus 138 --~l~~~~~--d~~i~~wd~~ 154 (166)
+|+++.. ++.|.+|++.
T Consensus 270 g~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 270 GKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp SSEEEEEECSSSCEEEEEEEC
T ss_pred CCEEEEECCCCCCEEEEEEEc
Confidence 6766655 4889999985
No 159
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.25 E-value=1.2e-09 Score=73.91 Aligned_cols=148 Identities=12% Similarity=0.069 Sum_probs=107.9
Q ss_pred cceEEEEecCCCceEEEeecccccceeeceeeeeeeeccC-CceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc
Q psy16373 5 VHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHH-QPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH 81 (166)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~ 81 (166)
.....+++++.++.+.+++....+ .+..+..+. ..+.++.+ ++++++ +.++.|..||. +++.+.++.
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~-------~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~ 72 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKE-------IVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIA 72 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTE-------EEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEE
T ss_pred CCCcEEEeeCCCCEEEEEECCCCe-------EEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEc
Confidence 345778889999999988864433 233444443 35667777 777777 45788999999 788888887
Q ss_pred CC-CCceEEEEEcCCCCEEEEecC-CCcEEEEeCcCCeeeEEeec------ccccEEEEEEcC--CeEEEeecCCcEEEE
Q psy16373 82 GH-CGPITTLFIDGVSMMSGSGSQ-DGLLCVWDTVTGACMYSIQA------HDGCIHALTYSD--SYVISLGQDERLCVW 151 (166)
Q Consensus 82 ~~-~~~v~~~~~~~~~~~~~~~~~-d~~v~~~d~~~~~~~~~~~~------~~~~v~~i~~~~--~~l~~~~~d~~i~~w 151 (166)
.+ ...+.+..+.++++.+++.+. ++.+..+|. +++.+..+.. +......+++.+ +++++...++.|..|
T Consensus 73 ~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~ 151 (276)
T 3no2_A 73 APAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREI 151 (276)
T ss_dssp CCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEE
T ss_pred CCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEE
Confidence 64 357889999999999998876 778888885 6777666542 112333445555 588888889999999
Q ss_pred ECCcccceeeeee
Q psy16373 152 DRFQGHLLSTIQL 164 (166)
Q Consensus 152 d~~~~~~~~~~~~ 164 (166)
|.. |+.+.++..
T Consensus 152 d~~-G~~~w~~~~ 163 (276)
T 3no2_A 152 APN-GQLLNSVKL 163 (276)
T ss_dssp CTT-SCEEEEEEC
T ss_pred CCC-CCEEEEEEC
Confidence 987 999988765
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.24 E-value=1.2e-10 Score=88.30 Aligned_cols=129 Identities=12% Similarity=0.038 Sum_probs=87.2
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCC---ceEEEEe--cCcEEEEEec---------CCeEEEEEcc
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQ---PITVLEC--VSNRVITGSQ---------DHTLKVYKLE 72 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~i~~~~~--~~~~l~~~~~---------d~~v~v~~~~ 72 (166)
+..++++ .++.+.+|+...... ...+.++.. .+.+++| ++++|++++. ++.+++||+.
T Consensus 27 g~~~~~~-~d~~i~~~~~~~g~~-------~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 27 QEYLHQS-ADNNIVLYNIETGQS-------YTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp SEEEEEC-TTSCEEEEESSSCCE-------EEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred CeEEEEc-CCCCEEEEEcCCCcE-------EEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 4344444 577888888754431 112223322 3788888 8899988876 7899999999
Q ss_pred cccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe-ecccccE-----------------EEEEE
Q psy16373 73 DQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI-QAHDGCI-----------------HALTY 134 (166)
Q Consensus 73 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~-~~~~~~v-----------------~~i~~ 134 (166)
+++.+.... ....+..++|+|+|+.++.+. ++.|++||+.+++..... .++...+ ..++|
T Consensus 99 ~g~~~~~~~-l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~w 176 (719)
T 1z68_A 99 NGEFVRGNE-LPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWW 176 (719)
T ss_dssp TTEECCSSC-CCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEE
T ss_pred CCcccccee-cCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEE
Confidence 887631111 124688899999999999875 789999999887654422 2222222 47999
Q ss_pred cCC--eEEEeecC
Q psy16373 135 SDS--YVISLGQD 145 (166)
Q Consensus 135 ~~~--~l~~~~~d 145 (166)
+|+ .|++++.|
T Consensus 177 SPDG~~la~~~~d 189 (719)
T 1z68_A 177 SPNGKFLAYAEFN 189 (719)
T ss_dssp CTTSSEEEEEEEE
T ss_pred CCCCCEEEEEEEC
Confidence 994 78877755
No 161
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.23 E-value=3.9e-10 Score=85.21 Aligned_cols=116 Identities=13% Similarity=0.116 Sum_probs=85.3
Q ss_pred ccCCceEEEEe--cCcEEEEEecCC-----eEEEEEcccccceehhc--CCC---CceEEEEEcC--CCCEEEEecCCCc
Q psy16373 42 AHHQPITVLEC--VSNRVITGSQDH-----TLKVYKLEDQQLLFTLH--GHC---GPITTLFIDG--VSMMSGSGSQDGL 107 (166)
Q Consensus 42 ~~~~~i~~~~~--~~~~l~~~~~d~-----~v~v~~~~~~~~~~~~~--~~~---~~v~~~~~~~--~~~~~~~~~~d~~ 107 (166)
.|...+.+++| +++.|++++.++ .|.+||+.+++....+. .+. ..+..+.|+| +++++++++.|+.
T Consensus 255 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~ 334 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGW 334 (706)
T ss_dssp CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSS
T ss_pred CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCc
Confidence 46678999999 888898887775 99999999883333322 122 2346789999 9999999999999
Q ss_pred EEEEeCc-CCeeeEEeecccccEEE-EEEcCC--eEEEe-ecCC----cEEEEECCccc
Q psy16373 108 LCVWDTV-TGACMYSIQAHDGCIHA-LTYSDS--YVISL-GQDE----RLCVWDRFQGH 157 (166)
Q Consensus 108 v~~~d~~-~~~~~~~~~~~~~~v~~-i~~~~~--~l~~~-~~d~----~i~~wd~~~~~ 157 (166)
+++|++. ++..+..+..+...+.. ++|+|+ .|+.+ ..++ .|..||..+++
T Consensus 335 ~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 335 NHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp CEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred cEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 9999876 66777777777777876 799983 55444 4444 67777877664
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.21 E-value=7.6e-10 Score=82.04 Aligned_cols=109 Identities=17% Similarity=0.103 Sum_probs=81.1
Q ss_pred eEEEEecCc-EEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC----CcEEEEeCcCCeeeEE
Q psy16373 47 ITVLECVSN-RVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD----GLLCVWDTVTGACMYS 121 (166)
Q Consensus 47 i~~~~~~~~-~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d----~~v~~~d~~~~~~~~~ 121 (166)
+.+++++++ .+++.+.++.+.+||+.+++.......+ . .+++|+|+|+.+++++.+ +.|++||+.+++.. .
T Consensus 114 ~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~ 189 (582)
T 3o4h_A 114 ILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-V 189 (582)
T ss_dssp EEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-E
T ss_pred eeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-E
Confidence 445555554 3344444455569999988654433322 2 789999999999987766 78999999888754 5
Q ss_pred eecccccEEEEEEcCC--eEEEeecCC--cEEEEECCcccce
Q psy16373 122 IQAHDGCIHALTYSDS--YVISLGQDE--RLCVWDRFQGHLL 159 (166)
Q Consensus 122 ~~~~~~~v~~i~~~~~--~l~~~~~d~--~i~~wd~~~~~~~ 159 (166)
+..|...+..++|+|+ .|+++..++ .|++||+.+++..
T Consensus 190 l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 190 FDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp ECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred eecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 6778888999999994 788777788 8999999887765
No 163
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.14 E-value=2.3e-08 Score=69.21 Aligned_cols=121 Identities=12% Similarity=0.102 Sum_probs=88.1
Q ss_pred ccCCceEEEEe--cCcEEEEEecCCeEEEEEccccc-ceehh---------cCCCCceEEEEEcC-CCCEEEEec-CCCc
Q psy16373 42 AHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ-LLFTL---------HGHCGPITTLFIDG-VSMMSGSGS-QDGL 107 (166)
Q Consensus 42 ~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~-~~~~~---------~~~~~~v~~~~~~~-~~~~~~~~~-~d~~ 107 (166)
++......+++ +++++++...++.|++||..... .+..+ ..+......++++| ++..+++.+ .++.
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~ 167 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSR 167 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCE
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCe
Confidence 34456788888 67778887888999999986442 33333 23445689999999 788888886 6899
Q ss_pred EEEEeCcCCeeeEEeeccc----------ccEEEEEEcC--CeE-EEeecCCcEEEEECCcccceeeee
Q psy16373 108 LCVWDTVTGACMYSIQAHD----------GCIHALTYSD--SYV-ISLGQDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 108 v~~~d~~~~~~~~~~~~~~----------~~v~~i~~~~--~~l-~~~~~d~~i~~wd~~~~~~~~~~~ 163 (166)
|++|| .++..+..+.... .....++++| +.+ ++...++.|++||..+++.+..+.
T Consensus 168 I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~ 235 (329)
T 3fvz_A 168 IVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIK 235 (329)
T ss_dssp EEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred EEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEe
Confidence 99999 5677666664221 2378899987 344 444567899999998888877663
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.13 E-value=2.2e-08 Score=69.24 Aligned_cols=149 Identities=9% Similarity=0.077 Sum_probs=100.8
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeee---------eccCCceEEEEe---cCcEEEEEe-cCCeEEEEEccc
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVEST---------RAHHQPITVLEC---VSNRVITGS-QDHTLKVYKLED 73 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~i~~~~~---~~~~l~~~~-~d~~v~v~~~~~ 73 (166)
+.++++...++.+..++...... .+..+ .++......+++ ++.++++.+ .++.|++|+ .+
T Consensus 102 g~l~v~d~~~~~v~~~~~~g~~~------~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~ 174 (329)
T 3fvz_A 102 GNYWVTDVALHQVFKLDPHSKEG------PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PS 174 (329)
T ss_dssp SCEEEEETTTTEEEEECTTCSSC------CSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TT
T ss_pred CCEEEEECCCCEEEEEeCCCCeE------EEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CC
Confidence 34566666666666666532210 11111 234446788898 245555554 589999999 45
Q ss_pred ccceehhcC----------CCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeEEee--cccccEEEEEEcCCeEE
Q psy16373 74 QQLLFTLHG----------HCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMYSIQ--AHDGCIHALTYSDSYVI 140 (166)
Q Consensus 74 ~~~~~~~~~----------~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~~~~--~~~~~v~~i~~~~~~l~ 140 (166)
++.+..+.. +......++++|+ +..+++...++.|++||..+++.+..+. .+...+..++|+|..++
T Consensus 175 g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~ 254 (329)
T 3fvz_A 175 GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLF 254 (329)
T ss_dssp SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEE
T ss_pred CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEE
Confidence 665555432 2234789999998 8888888889999999998888888774 34567888999986444
Q ss_pred Eeec--------CCcEEEEECCcccceeee
Q psy16373 141 SLGQ--------DERLCVWDRFQGHLLSTI 162 (166)
Q Consensus 141 ~~~~--------d~~i~~wd~~~~~~~~~~ 162 (166)
.... +..|++||..+++.+..+
T Consensus 255 ~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 255 AVNGKPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp EEECCCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred EeCCCEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 4432 348999999999888766
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.13 E-value=2.1e-09 Score=80.70 Aligned_cols=115 Identities=10% Similarity=-0.017 Sum_probs=85.5
Q ss_pred cCCceEEEEe--cCcEEEEEecC----------CeEEEEEccc------ccceehhc-CCCCceEEEEEcCCCCEEEEec
Q psy16373 43 HHQPITVLEC--VSNRVITGSQD----------HTLKVYKLED------QQLLFTLH-GHCGPITTLFIDGVSMMSGSGS 103 (166)
Q Consensus 43 ~~~~i~~~~~--~~~~l~~~~~d----------~~v~v~~~~~------~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~ 103 (166)
|...+.+++| +++.|+.++.+ ..|.+||+.+ ++. ..+. .+...+..++|+|+|+.++..+
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~ 206 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLA 206 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEE
Confidence 5567888888 88899988877 5899999987 544 3444 5566788899999999998776
Q ss_pred CC--------CcEEEEeCc-CC---eeeEEeecccccEEEEEEcCC--eEEEeecCC--cEEEEECCcccc
Q psy16373 104 QD--------GLLCVWDTV-TG---ACMYSIQAHDGCIHALTYSDS--YVISLGQDE--RLCVWDRFQGHL 158 (166)
Q Consensus 104 ~d--------~~v~~~d~~-~~---~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~--~i~~wd~~~~~~ 158 (166)
.+ ..|++||+. ++ +.......+...+..+.|+|+ +++++..++ .|..||+.+++.
T Consensus 207 ~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~ 277 (662)
T 3azo_A 207 WDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAA 277 (662)
T ss_dssp ECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCE
T ss_pred CCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCce
Confidence 44 379999998 56 443334445678999999983 667777777 677777656553
No 166
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.13 E-value=2.8e-10 Score=86.19 Aligned_cols=149 Identities=14% Similarity=0.067 Sum_probs=96.2
Q ss_pred ccceEEEEecCC---------CceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcc
Q psy16373 4 SVHRIHLRTGSA---------GSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLE 72 (166)
Q Consensus 4 ~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~ 72 (166)
++.+..++.++. ++.+.+|+....+... ...+ ...+..++| +|+.|+.+. ++.|++|++.
T Consensus 68 SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~-----~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~ 138 (719)
T 1z68_A 68 SPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR-----GNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRP 138 (719)
T ss_dssp CTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-----SSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESST
T ss_pred CCCCCeEEEEecCceeEEeecceEEEEEECCCCcccc-----ceec---CcccccceECCCCCEEEEEE-CCeEEEEeCC
Confidence 344555555554 5677778765433100 0111 135777888 888888875 7899999998
Q ss_pred cccceehh-cCCCCce-----------------EEEEEcCCCCEEEEecCCC----------------------------
Q psy16373 73 DQQLLFTL-HGHCGPI-----------------TTLFIDGVSMMSGSGSQDG---------------------------- 106 (166)
Q Consensus 73 ~~~~~~~~-~~~~~~v-----------------~~~~~~~~~~~~~~~~~d~---------------------------- 106 (166)
+++..... .++...+ .+++|+|+|+.++.++.|.
T Consensus 139 ~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g 218 (719)
T 1z68_A 139 GDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAG 218 (719)
T ss_dssp TSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTT
T ss_pred CCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCC
Confidence 87654332 2222222 4899999999999887552
Q ss_pred ------cEEEEeCcCCeee--------EEeecccccEEEEEEcCC--eEEEeecC----CcEEEEE----CCcccceee
Q psy16373 107 ------LLCVWDTVTGACM--------YSIQAHDGCIHALTYSDS--YVISLGQD----ERLCVWD----RFQGHLLST 161 (166)
Q Consensus 107 ------~v~~~d~~~~~~~--------~~~~~~~~~v~~i~~~~~--~l~~~~~d----~~i~~wd----~~~~~~~~~ 161 (166)
.+++||+.+++.. ..+.+|...+..++|+|+ .+++.... ..|.+|| +.+++....
T Consensus 219 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~ 297 (719)
T 1z68_A 219 AKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKT 297 (719)
T ss_dssp SCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGG
T ss_pred CCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEE
Confidence 7889999877642 123357778999999995 44443322 2488899 777765443
No 167
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.11 E-value=3.6e-08 Score=66.54 Aligned_cols=118 Identities=10% Similarity=0.169 Sum_probs=84.8
Q ss_pred cCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc--CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee
Q psy16373 43 HHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH--GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC 118 (166)
Q Consensus 43 ~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~ 118 (166)
+...+.++++ +++++++...++.|.+||.. ++.+..+. .+...+..++++++++.+++...++.|.+||. +++.
T Consensus 119 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~ 196 (286)
T 1q7f_A 119 ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQY 196 (286)
T ss_dssp TCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCE
T ss_pred cCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCE
Confidence 3456788888 66777776778999999965 44444443 34456899999999998888888999999997 4555
Q ss_pred eEEeecc--cccEEEEEEcCC--eEEEeecCC-cEEEEECCcccceeeee
Q psy16373 119 MYSIQAH--DGCIHALTYSDS--YVISLGQDE-RLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 119 ~~~~~~~--~~~v~~i~~~~~--~l~~~~~d~-~i~~wd~~~~~~~~~~~ 163 (166)
+..+..+ ...+..++++++ .+++...++ .|.+||. +++.+..+.
T Consensus 197 ~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~ 245 (286)
T 1q7f_A 197 LRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALE 245 (286)
T ss_dssp EEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEE
T ss_pred EEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEc
Confidence 6666433 256789999883 445554565 9999995 566666554
No 168
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.10 E-value=1e-08 Score=72.49 Aligned_cols=116 Identities=10% Similarity=0.091 Sum_probs=86.0
Q ss_pred EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCCce
Q psy16373 8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPI 87 (166)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v 87 (166)
..++.+ .++.+.+|+........ ....|..++.++.+....+++++.||.+.+||+.++.... +...|
T Consensus 98 ~~L~v~-~~~~l~v~dv~sl~~~~-------~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~----~~~~V 165 (388)
T 1xip_A 98 DQVLVS-TRNALYSLDLEELSEFR-------TVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ----LAQNV 165 (388)
T ss_dssp TEEEEE-ESSEEEEEESSSTTCEE-------EEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE----EEESE
T ss_pred CEEEEE-cCCcEEEEEchhhhccC-------ccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc----ccCCc
Confidence 355556 77788888876543211 2345566788888833348889999999999999776542 45689
Q ss_pred EEEEEcCCCCEEEEecCCCcEEEEeCcCCee--eEEe------e---cccccEEEEEEcCC
Q psy16373 88 TTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC--MYSI------Q---AHDGCIHALTYSDS 137 (166)
Q Consensus 88 ~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~--~~~~------~---~~~~~v~~i~~~~~ 137 (166)
++++|+|.| ++.|..||.+++|+....+. ...+ . +|...|.++.|.++
T Consensus 166 s~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~ 224 (388)
T 1xip_A 166 TSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSP 224 (388)
T ss_dssp EEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSS
T ss_pred eEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecC
Confidence 999999999 67788999999999877764 4555 2 36778999999974
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.07 E-value=1.5e-07 Score=65.88 Aligned_cols=141 Identities=7% Similarity=-0.004 Sum_probs=89.8
Q ss_pred CCceEEEeecccccceeeceeeeeeee-ccCCceEEEEe--cCcEEEEEec-CCeEEEEEcc-cccce--ehhc--CCCC
Q psy16373 15 AGSLLDFKKMQVEEEMTLTCCKVESTR-AHHQPITVLEC--VSNRVITGSQ-DHTLKVYKLE-DQQLL--FTLH--GHCG 85 (166)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~--~~~~l~~~~~-d~~v~v~~~~-~~~~~--~~~~--~~~~ 85 (166)
.++.+.+|+........ .....+. .+...+.+++| +++++++++. ++.|.+|++. +++.. ..+. .+..
T Consensus 117 ~~g~v~v~~~~~~g~~~---~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~ 193 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLE---KNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGD 193 (365)
T ss_dssp SCCEEEEEEECTTCCEE---EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTC
T ss_pred CCceEEEEccCCCCcCc---ceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCC
Confidence 56677777765322111 1111111 24567889999 7778877654 6899999998 66542 2333 2356
Q ss_pred ceEEEEEcCCCCEEEEec-CCCcEEEEeCc--CCeee---EEee-------cccc------cEEEEE-EcCC--eEEEee
Q psy16373 86 PITTLFIDGVSMMSGSGS-QDGLLCVWDTV--TGACM---YSIQ-------AHDG------CIHALT-YSDS--YVISLG 143 (166)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~-~d~~v~~~d~~--~~~~~---~~~~-------~~~~------~v~~i~-~~~~--~l~~~~ 143 (166)
.+..++|+|+++++++++ .++.+.+|++. +++.. ..+. +|.. .+..++ |+|+ +|++++
T Consensus 194 ~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~ 273 (365)
T 1jof_A 194 HPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASS 273 (365)
T ss_dssp CEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEE
T ss_pred CCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEEC
Confidence 689999999998887765 46899999765 45432 1222 1121 478899 9984 676665
Q ss_pred cC-C-----cEEEEECC-cccc
Q psy16373 144 QD-E-----RLCVWDRF-QGHL 158 (166)
Q Consensus 144 ~d-~-----~i~~wd~~-~~~~ 158 (166)
.+ . .|.+|++. +++.
T Consensus 274 ~~~~~~~~~~i~v~~~~~~g~~ 295 (365)
T 1jof_A 274 RANKFELQGYIAGFKLRDCGSI 295 (365)
T ss_dssp EESSTTSCCEEEEEEECTTSCE
T ss_pred CCCCCCCCCeEEEEEECCCCCE
Confidence 43 3 89999996 5554
No 170
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.04 E-value=1.5e-08 Score=77.34 Aligned_cols=127 Identities=10% Similarity=-0.039 Sum_probs=85.3
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCC-----ceEEEEe--cCcEEEEEecC---------CeEEEEE
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQ-----PITVLEC--VSNRVITGSQD---------HTLKVYK 70 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~i~~~~~--~~~~l~~~~~d---------~~v~v~~ 70 (166)
+..++++ ++.+.+|+....... ..+.+|.. ....++| ++++|+.++.+ +.+.+||
T Consensus 28 g~~~~~~--~~~i~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d 98 (740)
T 4a5s_A 28 HEYLYKQ--ENNILVFNAEYGNSS-------VFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYD 98 (740)
T ss_dssp SEEEEEE--TTEEEEEETTTCCEE-------EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred CcEEEEc--CCcEEEEECCCCceE-------EEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEE
Confidence 4566665 778888887654321 12333332 2333556 88999988876 5667999
Q ss_pred cccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE-eecccccE-----------------EEE
Q psy16373 71 LEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS-IQAHDGCI-----------------HAL 132 (166)
Q Consensus 71 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~-~~~~~~~v-----------------~~i 132 (166)
+.+++.. .+..+...+...+|+|+|+.++.+ .++.|++||+.+++..+. ..++...+ ..+
T Consensus 99 ~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~ 176 (740)
T 4a5s_A 99 LNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSAL 176 (740)
T ss_dssp TTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCE
T ss_pred CCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcce
Confidence 9988754 456677889999999999999887 478999999987764432 22222222 248
Q ss_pred EEcCC--eEEEeec
Q psy16373 133 TYSDS--YVISLGQ 144 (166)
Q Consensus 133 ~~~~~--~l~~~~~ 144 (166)
.|+|+ .|+..+.
T Consensus 177 ~wSpDg~~la~~~~ 190 (740)
T 4a5s_A 177 WWSPNGTFLAYAQF 190 (740)
T ss_dssp EECTTSSEEEEEEE
T ss_pred EECCCCCEEEEEEE
Confidence 89994 6766643
No 171
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.03 E-value=1.2e-08 Score=69.14 Aligned_cols=107 Identities=8% Similarity=0.073 Sum_probs=86.9
Q ss_pred CcEEEEEecCCeEEEEEcccccceehhcCCC-CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeeccc-ccEEE
Q psy16373 54 SNRVITGSQDHTLKVYKLEDQQLLFTLHGHC-GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHD-GCIHA 131 (166)
Q Consensus 54 ~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~v~~ 131 (166)
++.|++++.++.|.+||.++++.+.++..+. ..+.++.+.|+++.++ +.++.+..||. +++.+..+..+. ..+.+
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~ 81 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQT 81 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccc
Confidence 5788999999999999999999999888765 4788999999999888 34778999998 899998887653 46778
Q ss_pred EEEcC--CeEEEeec-CCcEEEEECCcccceeeeee
Q psy16373 132 LTYSD--SYVISLGQ-DERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 132 i~~~~--~~l~~~~~-d~~i~~wd~~~~~~~~~~~~ 164 (166)
+.+.+ +.+++.+. ++.|..+|. +|+.+.++.+
T Consensus 82 ~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~ 116 (276)
T 3no2_A 82 ARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEF 116 (276)
T ss_dssp EEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEE
T ss_pred cEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEec
Confidence 88877 46776666 677888875 7888777664
No 172
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.02 E-value=3.6e-08 Score=69.05 Aligned_cols=144 Identities=7% Similarity=-0.040 Sum_probs=88.2
Q ss_pred EEEecCCCceEEEeecccccceeeceeeeeeee--ccCCceEEEEe--cCcEEEEEec-CCeEEEEEcc--cccce----
Q psy16373 9 HLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR--AHHQPITVLEC--VSNRVITGSQ-DHTLKVYKLE--DQQLL---- 77 (166)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~--~~~~l~~~~~-d~~v~v~~~~--~~~~~---- 77 (166)
++++...++.+.+|+..... .. .....+. .|...+..++| +++++++++. ++.|.+|++. +++..
T Consensus 159 l~~~~~~~~~v~~~~~~~~g--~~--~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~ 234 (365)
T 1jof_A 159 LYSADLTANKLWTHRKLASG--EV--ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHH 234 (365)
T ss_dssp EEEEETTTTEEEEEEECTTS--CE--EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred EEEEcCCCCEEEEEEECCCC--CE--EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccc
Confidence 33344345567777764211 11 1111222 23456788888 7778877764 7899999875 44432
Q ss_pred --ehhcC----CCC------ceEEEE-EcCCCCEEEEecCCC------cEEEEeCc-CCeeeE---EeecccccEEEEEE
Q psy16373 78 --FTLHG----HCG------PITTLF-IDGVSMMSGSGSQDG------LLCVWDTV-TGACMY---SIQAHDGCIHALTY 134 (166)
Q Consensus 78 --~~~~~----~~~------~v~~~~-~~~~~~~~~~~~~d~------~v~~~d~~-~~~~~~---~~~~~~~~v~~i~~ 134 (166)
..+.. |.. .+..++ |+|+++++++++.+. .|.+|++. +++... ....+...+..++|
T Consensus 235 ~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~ 314 (365)
T 1jof_A 235 SFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAV 314 (365)
T ss_dssp EEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCE
T ss_pred eEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCccccee
Confidence 12221 122 478999 999999887765432 89999986 565433 13233444556778
Q ss_pred cC-----CeEEEeec-CCcEEEEECCcc
Q psy16373 135 SD-----SYVISLGQ-DERLCVWDRFQG 156 (166)
Q Consensus 135 ~~-----~~l~~~~~-d~~i~~wd~~~~ 156 (166)
+| ++|++++. ++.|.+|++...
T Consensus 315 sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 315 SPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred cCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 76 37888776 489999998654
No 173
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.01 E-value=1.2e-09 Score=83.31 Aligned_cols=110 Identities=9% Similarity=-0.039 Sum_probs=84.5
Q ss_pred ceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCc-----eEEEEEcCCCCEEEEecCC---------CcEE
Q psy16373 46 PITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGP-----ITTLFIDGVSMMSGSGSQD---------GLLC 109 (166)
Q Consensus 46 ~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~-----v~~~~~~~~~~~~~~~~~d---------~~v~ 109 (166)
...++.| ++.+++++ |+.|++||+.+++....+.+|... ...+.|+|+++.++.++.+ +.+.
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~ 95 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYD 95 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEE
Confidence 3457788 66777775 999999999998876666655432 2458899999999988775 5677
Q ss_pred EEeCcCCeeeEEeecccccEEEEEEcCC--eEEEeecCCcEEEEECCcccce
Q psy16373 110 VWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLGQDERLCVWDRFQGHLL 159 (166)
Q Consensus 110 ~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~~i~~wd~~~~~~~ 159 (166)
+||+.+++.. .+..+...+...+|+|+ .|+.+ .|+.|++||+.+++..
T Consensus 96 ~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 96 IYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSY 145 (740)
T ss_dssp EEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCE
T ss_pred EEECCCCcEE-EcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceE
Confidence 9999998754 35666778999999994 66666 5789999999877643
No 174
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.01 E-value=4.4e-08 Score=67.78 Aligned_cols=118 Identities=9% Similarity=0.013 Sum_probs=88.6
Q ss_pred ceEEEEecCc-EEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec
Q psy16373 46 PITVLECVSN-RVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA 124 (166)
Q Consensus 46 ~i~~~~~~~~-~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~ 124 (166)
....+.++++ ..++...++.|.+||..+++.+.++. .......+++++++..+++...++.|.+||..+++....+..
T Consensus 45 ~~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~ 123 (328)
T 3dsm_A 45 VAQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIEC 123 (328)
T ss_dssp CEEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEEC
T ss_pred cceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEc
Confidence 3567777444 45555567999999999999888775 345688999988886666655889999999999988777654
Q ss_pred cc-----ccEEEEEEcCCeEEEee--cCCcEEEEECCcccceeeeee
Q psy16373 125 HD-----GCIHALTYSDSYVISLG--QDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 125 ~~-----~~v~~i~~~~~~l~~~~--~d~~i~~wd~~~~~~~~~~~~ 164 (166)
.. .....+++..+.++.+. .++.|.++|+.+++.+.++..
T Consensus 124 g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~ 170 (328)
T 3dsm_A 124 PDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTI 170 (328)
T ss_dssp TTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEEC
T ss_pred CCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc
Confidence 33 13445666667777666 488999999999988877764
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.99 E-value=9.7e-09 Score=77.13 Aligned_cols=115 Identities=16% Similarity=0.066 Sum_probs=79.2
Q ss_pred ccCCceEEEEe--cCcEEEEEecC--------CeEEEEEcc-cc---cceehhcCCCCceEEEEEcCCCCEEEEecCCC-
Q psy16373 42 AHHQPITVLEC--VSNRVITGSQD--------HTLKVYKLE-DQ---QLLFTLHGHCGPITTLFIDGVSMMSGSGSQDG- 106 (166)
Q Consensus 42 ~~~~~i~~~~~--~~~~l~~~~~d--------~~v~v~~~~-~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~- 106 (166)
.+...+..++| +++.|+.++.+ ..|.+||+. ++ +.......+...+..+.|+|+++.+++++.++
T Consensus 185 ~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~ 264 (662)
T 3azo_A 185 DAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGW 264 (662)
T ss_dssp SCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSS
T ss_pred cCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCC
Confidence 34456667777 88899887755 379999998 46 33333344567899999999999888888888
Q ss_pred -cEEEEeCcCCeeeEEeeccccc--------EEEEEEcC--CeEEEeecCCcEEEE--ECCccc
Q psy16373 107 -LLCVWDTVTGACMYSIQAHDGC--------IHALTYSD--SYVISLGQDERLCVW--DRFQGH 157 (166)
Q Consensus 107 -~v~~~d~~~~~~~~~~~~~~~~--------v~~i~~~~--~~l~~~~~d~~i~~w--d~~~~~ 157 (166)
.+.+||+.+++.......+... +..++|++ ..++++.. +.+++| |..+++
T Consensus 265 ~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 265 WNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp CEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred eEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc
Confidence 6667777666644333332222 45688876 46777777 888888 554443
No 176
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.95 E-value=5.1e-09 Score=73.51 Aligned_cols=100 Identities=9% Similarity=0.113 Sum_probs=79.0
Q ss_pred cCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEec----------CCCcEEEEeCcCCeeeEEeecc------
Q psy16373 62 QDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS----------QDGLLCVWDTVTGACMYSIQAH------ 125 (166)
Q Consensus 62 ~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~d~~v~~~d~~~~~~~~~~~~~------ 125 (166)
.|+.|.+||..+++.+..+..+..+ .++++|+++++.+++ .++.|.+||..+.+.+..+...
T Consensus 29 ~d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~ 106 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQG 106 (361)
T ss_dssp GGCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCB
T ss_pred ccCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCcccccc
Confidence 4789999999999888877766555 899999999888875 2568999999998888877532
Q ss_pred cccEEEEEEcC--CeEEEeec--CCcEEEEECCcccceee-ee
Q psy16373 126 DGCIHALTYSD--SYVISLGQ--DERLCVWDRFQGHLLST-IQ 163 (166)
Q Consensus 126 ~~~v~~i~~~~--~~l~~~~~--d~~i~~wd~~~~~~~~~-~~ 163 (166)
......++++| .+++++.. ++.|.+||+.+++.+.+ +.
T Consensus 107 g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~ 149 (361)
T 2oiz_A 107 LNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTA 149 (361)
T ss_dssp CCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGG
T ss_pred CCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEec
Confidence 23345788988 47887764 57899999999988776 44
No 177
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.94 E-value=4.2e-08 Score=68.86 Aligned_cols=111 Identities=14% Similarity=-0.042 Sum_probs=80.9
Q ss_pred EEe--cCcEEEEEec-CC--eEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec
Q psy16373 50 LEC--VSNRVITGSQ-DH--TLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA 124 (166)
Q Consensus 50 ~~~--~~~~l~~~~~-d~--~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~ 124 (166)
.+| +++.|+.++. ++ .|.+||+.+++......++...+....|+|+++.++.++.++.+++||+.+++....+..
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~ 120 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQV 120 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEEC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeec
Confidence 566 7888888877 66 488889988887666666655555678999999999999899999999999887666665
Q ss_pred ccccEEEEEE--cCC--eEEE----------------------eecCCcEEEEECCccccee
Q psy16373 125 HDGCIHALTY--SDS--YVIS----------------------LGQDERLCVWDRFQGHLLS 160 (166)
Q Consensus 125 ~~~~v~~i~~--~~~--~l~~----------------------~~~d~~i~~wd~~~~~~~~ 160 (166)
+...+....| +++ .++. ...+..|.+||+.+++...
T Consensus 121 ~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~ 182 (388)
T 3pe7_A 121 PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV 182 (388)
T ss_dssp CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE
T ss_pred hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE
Confidence 5554443433 553 4432 2234679999998886543
No 178
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.94 E-value=7.6e-08 Score=64.27 Aligned_cols=115 Identities=6% Similarity=-0.018 Sum_probs=82.4
Q ss_pred CceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe
Q psy16373 45 QPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI 122 (166)
Q Consensus 45 ~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~ 122 (166)
..+.++++ +++++++...++.|.+||............+...+.++++++++..+++...++.|.+||..........
T Consensus 150 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~ 229 (270)
T 1rwi_B 150 NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLP 229 (270)
T ss_dssp CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECC
T ss_pred CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeec
Confidence 34567777 5666666666789999998876544333333366889999999988888888899999998655433222
Q ss_pred ecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373 123 QAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL 159 (166)
Q Consensus 123 ~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~ 159 (166)
..+...+..+++++ ..+++...++.|++++....+.+
T Consensus 230 ~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 230 FTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHHHH 268 (270)
T ss_dssp CCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGGSC
T ss_pred cCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcccc
Confidence 22335678999987 35666667899999998877654
No 179
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.91 E-value=8.8e-07 Score=65.77 Aligned_cols=108 Identities=6% Similarity=-0.066 Sum_probs=78.3
Q ss_pred ceEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcc--cccceehhc
Q psy16373 6 HRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLE--DQQLLFTLH 81 (166)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~--~~~~~~~~~ 81 (166)
....+++...++.+.+++....+ .+..+.. ...+..+.+ +++++++++.|+.|.+||+. +.+.+.++.
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~-------v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~ 237 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYE-------IKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK 237 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCC-------EEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCe-------EEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEe
Confidence 45677888888888888765433 1122221 223457777 88999999999999999995 777777766
Q ss_pred CCCCceEEEEEc----CCCCEEEEecC-CCcEEEEeCcCCeeeEEe
Q psy16373 82 GHCGPITTLFID----GVSMMSGSGSQ-DGLLCVWDTVTGACMYSI 122 (166)
Q Consensus 82 ~~~~~v~~~~~~----~~~~~~~~~~~-d~~v~~~d~~~~~~~~~~ 122 (166)
.. .....++++ |+++++++++. ++.+.++|..+.+.+..+
T Consensus 238 ~G-~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i 282 (567)
T 1qks_A 238 IG-SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQ 282 (567)
T ss_dssp CC-SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEE
T ss_pred cC-CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEE
Confidence 43 345789999 69988777664 589999999888776654
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.90 E-value=3.4e-07 Score=63.05 Aligned_cols=119 Identities=8% Similarity=-0.051 Sum_probs=83.7
Q ss_pred eeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC----CcEEEEe
Q psy16373 39 STRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD----GLLCVWD 112 (166)
Q Consensus 39 ~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d----~~v~~~d 112 (166)
.+..+...+.+++| ++++++++..++.|.+||..+++.......+...+.+++++|+++++++...+ +.|.+||
T Consensus 39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d 118 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAAT 118 (333)
T ss_dssp EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEEC
T ss_pred EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEe
Confidence 44455566788999 66766777888999999998776554333456789999999999988877666 6899999
Q ss_pred CcCCeeeEEee--cccccEEEEEEcC-CeEEEeec-------CCcEEEEECCccc
Q psy16373 113 TVTGACMYSIQ--AHDGCIHALTYSD-SYVISLGQ-------DERLCVWDRFQGH 157 (166)
Q Consensus 113 ~~~~~~~~~~~--~~~~~v~~i~~~~-~~l~~~~~-------d~~i~~wd~~~~~ 157 (166)
..++.....+. .+...+..++++| +.++.++. .+.|..+|..+++
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~ 173 (333)
T 2dg1_A 119 ENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRT 173 (333)
T ss_dssp TTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCC
T ss_pred CCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCE
Confidence 88776543332 2345688999998 34444443 2556667765444
No 181
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.89 E-value=1.1e-10 Score=82.14 Aligned_cols=143 Identities=11% Similarity=0.044 Sum_probs=73.5
Q ss_pred EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCC
Q psy16373 8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCG 85 (166)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~ 85 (166)
..+++++.++.+..|+....+. ...+.. .++.+..+ ++..+++++.|+.|+.||.++++.+..+..+..
T Consensus 10 ~~v~~gs~dg~v~a~d~~tG~~-------~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~ 80 (369)
T 2hz6_A 10 TLLFVSTLDGSLHAVSKRTGSI-------KWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP 80 (369)
T ss_dssp TEEEEEETTSEEEEEETTTCCE-------EEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH
T ss_pred CEEEEEcCCCEEEEEECCCCCE-------EEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc
Confidence 4566677777787777654331 112222 23333333 555777778999999999998877655443211
Q ss_pred c-eE-EEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEc--CCeEEEeecCCcEEEEECCcccceee
Q psy16373 86 P-IT-TLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYS--DSYVISLGQDERLCVWDRFQGHLLST 161 (166)
Q Consensus 86 ~-v~-~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~ 161 (166)
. +. +..+. .+..+++++.++.+..||.++++.+..+..+.. ..++ .+.+++++.|+.|+.||.++|+.+.+
T Consensus 81 ~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~ 155 (369)
T 2hz6_A 81 ELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----DSLSPSTSLLYLGRTEYTITMYDTKTRELRWN 155 (369)
T ss_dssp HHHTTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCE
T ss_pred cccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----ccccccCCEEEEEecCCEEEEEECCCCCEEEe
Confidence 1 10 00111 234567778899999999999998887765432 2233 36888899999999999999998877
Q ss_pred eee
Q psy16373 162 IQL 164 (166)
Q Consensus 162 ~~~ 164 (166)
++.
T Consensus 156 ~~~ 158 (369)
T 2hz6_A 156 ATY 158 (369)
T ss_dssp EEE
T ss_pred Eec
Confidence 653
No 182
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.88 E-value=6.6e-08 Score=67.84 Aligned_cols=107 Identities=17% Similarity=0.059 Sum_probs=76.5
Q ss_pred cCcEEEEEecCCeEEEEEcccccce--ehhcC------CC----CceEEEEEcCCCCEEEEecC-----------CCcEE
Q psy16373 53 VSNRVITGSQDHTLKVYKLEDQQLL--FTLHG------HC----GPITTLFIDGVSMMSGSGSQ-----------DGLLC 109 (166)
Q Consensus 53 ~~~~l~~~~~d~~v~v~~~~~~~~~--~~~~~------~~----~~v~~~~~~~~~~~~~~~~~-----------d~~v~ 109 (166)
++..++..+.++.|.++|+...... ..+.. +. .....++++|++..+..+.. +..+.
T Consensus 210 ~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~ 289 (361)
T 2oiz_A 210 DKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIW 289 (361)
T ss_dssp CSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEE
T ss_pred cCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEE
Confidence 4566666778899999998654321 11100 00 11113688999766665432 34899
Q ss_pred EEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcc--cceeee
Q psy16373 110 VWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQG--HLLSTI 162 (166)
Q Consensus 110 ~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~--~~~~~~ 162 (166)
+||+++++.+..+..+. +..++|+| .++++++. +.|.+||..++ +.+.++
T Consensus 290 viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 290 VMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp EEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEE
T ss_pred EEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEe
Confidence 99999999999998776 88999998 47777776 99999999999 888776
No 183
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.87 E-value=2.2e-07 Score=65.21 Aligned_cols=115 Identities=10% Similarity=-0.086 Sum_probs=79.5
Q ss_pred ccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEE--EEcCCCCEEEEe---------------
Q psy16373 42 AHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTL--FIDGVSMMSGSG--------------- 102 (166)
Q Consensus 42 ~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~--~~~~~~~~~~~~--------------- 102 (166)
++...+....| +++.|+.++.++.+.+||+.+++....+..+...+... .++|++..++..
T Consensus 78 ~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~ 157 (388)
T 3pe7_A 78 GRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKK 157 (388)
T ss_dssp SSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHH
T ss_pred CCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccch
Confidence 44444434556 88999999999999999999887665555555544433 348888888632
Q ss_pred -------cCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC-C--eEEEeec------CCcEEEEECCccc
Q psy16373 103 -------SQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD-S--YVISLGQ------DERLCVWDRFQGH 157 (166)
Q Consensus 103 -------~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~--~l~~~~~------d~~i~~wd~~~~~ 157 (166)
..+..+.+||+.+++... +..+...+..+.|+| + .|+.+.. ...|.++|...+.
T Consensus 158 ~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~ 227 (388)
T 3pe7_A 158 FHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN 227 (388)
T ss_dssp HHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC
T ss_pred hhhhhccCCcceEEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc
Confidence 244689999999886543 444566788999999 5 5555554 2378888876543
No 184
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.87 E-value=1.6e-07 Score=69.69 Aligned_cols=110 Identities=9% Similarity=-0.057 Sum_probs=88.3
Q ss_pred cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc--CCeeeEEeecccccEE
Q psy16373 53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV--TGACMYSIQAHDGCIH 130 (166)
Q Consensus 53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~--~~~~~~~~~~~~~~v~ 130 (166)
.+..+++...++.|.++|..+++.+..+.. ...+..+.++|+++++.+++.|+.|.+||+. +.+.+..+.... ...
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~-~P~ 243 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS-EAR 243 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS-EEE
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC-CCc
Confidence 344566777889999999999988887763 3456799999999999999999999999996 778888776533 346
Q ss_pred EEEEc----CC--eEEEeec-CCcEEEEECCcccceeeeee
Q psy16373 131 ALTYS----DS--YVISLGQ-DERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 131 ~i~~~----~~--~l~~~~~-d~~i~~wd~~~~~~~~~~~~ 164 (166)
.++|+ |+ ++++++. ++.+.++|..+.+.+..+.+
T Consensus 244 ~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~ 284 (567)
T 1qks_A 244 SIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQST 284 (567)
T ss_dssp EEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEEC
T ss_pred eeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEec
Confidence 89999 43 6666665 68999999999999888764
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.85 E-value=3.8e-07 Score=63.06 Aligned_cols=110 Identities=9% Similarity=-0.042 Sum_probs=82.0
Q ss_pred eEEEEecCcEEEEEe--cCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC----------CcEEEEeCc
Q psy16373 47 ITVLECVSNRVITGS--QDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD----------GLLCVWDTV 114 (166)
Q Consensus 47 i~~~~~~~~~l~~~~--~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d----------~~v~~~d~~ 114 (166)
...+++++..++.+. .++.|.++|..+++.+..+.. ......+.++|+++.++++..+ +.|.++|.+
T Consensus 133 p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~ 211 (328)
T 3dsm_A 133 TEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTI-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAE 211 (328)
T ss_dssp CCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEEC-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETT
T ss_pred cceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEc-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECC
Confidence 445666566666655 489999999999887776654 2345788899999988887655 789999999
Q ss_pred CCeeeEEeecc-cccEEEEEEcC--CeEEEeecCCcEEEEECCcccce
Q psy16373 115 TGACMYSIQAH-DGCIHALTYSD--SYVISLGQDERLCVWDRFQGHLL 159 (166)
Q Consensus 115 ~~~~~~~~~~~-~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~ 159 (166)
+++....+... ......++++| +.++++.. .|.+||..+++..
T Consensus 212 t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~ 257 (328)
T 3dsm_A 212 TFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVP 257 (328)
T ss_dssp TTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCC
T ss_pred CCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCcee
Confidence 99877666532 23678999997 46666654 8999999887753
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.85 E-value=2.3e-06 Score=58.84 Aligned_cols=141 Identities=8% Similarity=-0.091 Sum_probs=88.5
Q ss_pred eEEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecC----CeEEEEEcccccceehh
Q psy16373 7 RIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQD----HTLKVYKLEDQQLLFTL 80 (166)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d----~~v~v~~~~~~~~~~~~ 80 (166)
+.+++++..++.+..|+...... ......+...+.++++ +++++++...+ +.|.+||..+++....+
T Consensus 56 g~l~~~~~~~~~i~~~d~~~~~~-------~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~ 128 (333)
T 2dg1_A 56 GQLFLLDVFEGNIFKINPETKEI-------KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDII 128 (333)
T ss_dssp SCEEEEETTTCEEEEECTTTCCE-------EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEE
T ss_pred CCEEEEECCCCEEEEEeCCCCcE-------EEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEE
Confidence 34555666666666665433221 1111134567899999 56666666555 68999999876543222
Q ss_pred c--CCCCceEEEEEcCCCCEEEEecC------CCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEe-ecCCcEE
Q psy16373 81 H--GHCGPITTLFIDGVSMMSGSGSQ------DGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISL-GQDERLC 149 (166)
Q Consensus 81 ~--~~~~~v~~~~~~~~~~~~~~~~~------d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~-~~d~~i~ 149 (166)
. .+...+.+++++|+++.+++... .+.+..+|..+++... +......+..++|+|+ .++.+ ..++.|.
T Consensus 129 ~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~ 207 (333)
T 2dg1_A 129 EDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVTETTANRLH 207 (333)
T ss_dssp CSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEEEGGGTEEE
T ss_pred ccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEEeCCCCeEE
Confidence 2 23457899999999988887654 3566667765544332 2223345788999984 45444 4578999
Q ss_pred EEECCc
Q psy16373 150 VWDRFQ 155 (166)
Q Consensus 150 ~wd~~~ 155 (166)
+||..+
T Consensus 208 ~~d~~~ 213 (333)
T 2dg1_A 208 RIALED 213 (333)
T ss_dssp EEEECT
T ss_pred EEEecC
Confidence 999864
No 187
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.83 E-value=6.4e-08 Score=73.37 Aligned_cols=114 Identities=7% Similarity=-0.128 Sum_probs=79.9
Q ss_pred ccCCceEEEEe--cCcEEE-----EEecCCeEEEEEcccccceehhcCCCCce--EEEEEcCCCCEEEEecCCCc-----
Q psy16373 42 AHHQPITVLEC--VSNRVI-----TGSQDHTLKVYKLEDQQLLFTLHGHCGPI--TTLFIDGVSMMSGSGSQDGL----- 107 (166)
Q Consensus 42 ~~~~~i~~~~~--~~~~l~-----~~~~d~~v~v~~~~~~~~~~~~~~~~~~v--~~~~~~~~~~~~~~~~~d~~----- 107 (166)
+|...+..++| ++++|+ .|+.+..|++||+.+++.+.. .+...+ ..++|+|+++.++.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~ 195 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV--DVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKV 195 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS--CCBSCCTTCCCEECTTSSEEEEEECCCCTTSCG
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC--cccCcccccceEEecCCCEEEEEEecCCCCCcc
Confidence 45557888888 888888 344457899999999876511 122222 68999999999998888766
Q ss_pred --------EEEEeCcCCe----eeEEeecccccEEEEEEcCC--eEEEeecCC----cEEEEECCccc
Q psy16373 108 --------LCVWDTVTGA----CMYSIQAHDGCIHALTYSDS--YVISLGQDE----RLCVWDRFQGH 157 (166)
Q Consensus 108 --------v~~~d~~~~~----~~~~~~~~~~~v~~i~~~~~--~l~~~~~d~----~i~~wd~~~~~ 157 (166)
|++|++.++. .+.....+...+..+.|+|+ +|+..+.++ .|.+|+..+++
T Consensus 196 ~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~ 263 (695)
T 2bkl_A 196 DERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD 263 (695)
T ss_dssp GGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS
T ss_pred ccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc
Confidence 9999998775 33333345567889999994 666666554 67777665443
No 188
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.82 E-value=6.2e-10 Score=78.37 Aligned_cols=110 Identities=13% Similarity=0.096 Sum_probs=65.5
Q ss_pred cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccc-cEE-
Q psy16373 53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDG-CIH- 130 (166)
Q Consensus 53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~-~v~- 130 (166)
.++.+++++.|+.|..||..+++.+..+.. ..+.+..+..++..+++++.|+.++.||.++++.+..+..+.. .+.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 688899999999999999999998877765 3444444445677788888999999999999987766654321 111
Q ss_pred EEEE-cCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373 131 ALTY-SDSYVISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 131 ~i~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
...+ ..+.+++++.|+.|+.||.++|+.+.++..
T Consensus 86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~ 120 (369)
T 2hz6_A 86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSS 120 (369)
T ss_dssp CSCC-----CCCCEEEEEEEEECCC----------
T ss_pred CceEecCCEEEEEeCCCEEEEEECCCCcEEEEecC
Confidence 1111 335788888999999999999998877654
No 189
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.82 E-value=1.2e-07 Score=71.96 Aligned_cols=112 Identities=13% Similarity=-0.015 Sum_probs=80.0
Q ss_pred cCCceEEEEe--cCcEEEEEecCC-----eEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCc--------
Q psy16373 43 HHQPITVLEC--VSNRVITGSQDH-----TLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGL-------- 107 (166)
Q Consensus 43 ~~~~i~~~~~--~~~~l~~~~~d~-----~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~-------- 107 (166)
|...+..++| ++++|+.+..++ .|++||+.+++....... ...+..++|+|+++.++.++.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~-~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLE-RVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEE-EECSCCEEECTTSSEEEEEECCCCSSCCSSSC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCccccc-CcccceEEEEeCCCEEEEEEECCccccccccc
Confidence 4446778888 888888765543 899999999877653222 223678999999999988877765
Q ss_pred --------EEEEeCcCCee----eEEeecccccEEEEEEcCC--eEEEeec-----CCcEEEEECCc
Q psy16373 108 --------LCVWDTVTGAC----MYSIQAHDGCIHALTYSDS--YVISLGQ-----DERLCVWDRFQ 155 (166)
Q Consensus 108 --------v~~~d~~~~~~----~~~~~~~~~~v~~i~~~~~--~l~~~~~-----d~~i~~wd~~~ 155 (166)
|++|++.++.. +.....+...+..+.|+|+ +|+..+. +..|.+||+.+
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 99999987752 2222224455788999984 5655554 57899999976
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.82 E-value=2.6e-07 Score=62.75 Aligned_cols=115 Identities=10% Similarity=-0.047 Sum_probs=76.8
Q ss_pred ceEEEEe--cCcEEEE----Ee-------------cCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCC
Q psy16373 46 PITVLEC--VSNRVIT----GS-------------QDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDG 106 (166)
Q Consensus 46 ~i~~~~~--~~~~l~~----~~-------------~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~ 106 (166)
.+..+++ +++++++ |. ..+.|..++.. ++ ...+..+......++++|+++.+++.+.++
T Consensus 116 ~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~ 193 (296)
T 3e5z_A 116 SPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDN 193 (296)
T ss_dssp CCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTT
T ss_pred CCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCC
Confidence 4566777 6777776 32 13455555554 33 333444566778999999999887778889
Q ss_pred cEEEEeCc-CCee---eEEeecccccEEEEEEcC-CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373 107 LLCVWDTV-TGAC---MYSIQAHDGCIHALTYSD-SYVISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 107 ~v~~~d~~-~~~~---~~~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
.|.+||+. +++. ...+..+...+..+++++ ..++.++ ++.|.+||.. ++.+..+..
T Consensus 194 ~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~~~~~~~~ 254 (296)
T 3e5z_A 194 ATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-GDELGRVLT 254 (296)
T ss_dssp EEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-SCEEEEEEC
T ss_pred eEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-CCEEEEEEC
Confidence 99999986 4443 223333344566789987 4566666 8899999986 777666654
No 191
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.78 E-value=1e-06 Score=58.71 Aligned_cols=113 Identities=3% Similarity=-0.089 Sum_probs=78.4
Q ss_pred CceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe
Q psy16373 45 QPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI 122 (166)
Q Consensus 45 ~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~ 122 (166)
..+.++++ +++++++...++.|.+|+..+.............+.+++++++++.+++...++.|.+||..........
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~ 187 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLP 187 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECC
T ss_pred CCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeec
Confidence 45788888 5666666667889999976654433222223345788999999998888777889999998766544332
Q ss_pred ecccccEEEEEEcCC-eEEEee-cCCcEEEEECCccc
Q psy16373 123 QAHDGCIHALTYSDS-YVISLG-QDERLCVWDRFQGH 157 (166)
Q Consensus 123 ~~~~~~v~~i~~~~~-~l~~~~-~d~~i~~wd~~~~~ 157 (166)
..+...+..++++++ .++.+. .++.|..||.....
T Consensus 188 ~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~ 224 (270)
T 1rwi_B 188 FTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTT 224 (270)
T ss_dssp CSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSC
T ss_pred ccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCc
Confidence 333356788999884 555554 57789999986543
No 192
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.75 E-value=7.8e-07 Score=67.48 Aligned_cols=138 Identities=8% Similarity=-0.062 Sum_probs=87.4
Q ss_pred ecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCe-------------EEEEEccccc-
Q psy16373 12 TGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHT-------------LKVYKLEDQQ- 75 (166)
Q Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~-------------v~v~~~~~~~- 75 (166)
.|+.+..+++|+....+... ...+... ....++| +++.|+.++.+.. |++|++.++.
T Consensus 142 ~G~~~~~i~v~dl~tg~~~~-----~~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~ 214 (695)
T 2bkl_A 142 NAADEAVLHVIDVDSGEWSK-----VDVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPS 214 (695)
T ss_dssp TTCSCCEEEEEETTTCCBCS-----SCCBSCC--TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGG
T ss_pred CCCceEEEEEEECCCCCCcC-----CcccCcc--cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCch
Confidence 55555678888875543210 0011111 1156778 7888998888765 9999998765
Q ss_pred ---ceehhcCCCCceEEEEEcCCCCEEEEecCCC----cEEEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeec----
Q psy16373 76 ---LLFTLHGHCGPITTLFIDGVSMMSGSGSQDG----LLCVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQ---- 144 (166)
Q Consensus 76 ---~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~----~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~---- 144 (166)
.+.....+...+..+.++|+|++++..+.++ .+++++..+++ ...+..+...+....+.++.++..+.
T Consensus 215 ~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~ 293 (695)
T 2bkl_A 215 KDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHAWKDRFYVLTDEGAP 293 (695)
T ss_dssp GCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEEETTEEEEEECTTCT
T ss_pred hceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEecCCcEEEEECCCCC
Confidence 3333334556788999999999888776655 67777765554 34444455555555565532544443
Q ss_pred CCcEEEEECCccc
Q psy16373 145 DERLCVWDRFQGH 157 (166)
Q Consensus 145 d~~i~~wd~~~~~ 157 (166)
++.|.+||+.+++
T Consensus 294 ~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 294 RQRVFEVDPAKPA 306 (695)
T ss_dssp TCEEEEEBTTBCS
T ss_pred CCEEEEEeCCCCC
Confidence 5789999998765
No 193
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.73 E-value=2.7e-06 Score=59.65 Aligned_cols=114 Identities=12% Similarity=0.137 Sum_probs=80.5
Q ss_pred EEEecCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeeccccc
Q psy16373 49 VLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGC 128 (166)
Q Consensus 49 ~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~ 128 (166)
.+...+..++.++.++.|..+|.++++.+................ +..++.++.++.+..+|.++++.+.........
T Consensus 98 ~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~ 175 (376)
T 3q7m_A 98 GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPS 175 (376)
T ss_dssp EEEEETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC--
T ss_pred CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCc
Confidence 334478888889999999999999998876655332221122222 346777788999999999999988777543221
Q ss_pred E-----EEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373 129 I-----HALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 129 v-----~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
. .......+.++.++.++.|..+|.++++.+.+...
T Consensus 176 ~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~ 216 (376)
T 3q7m_A 176 LSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRI 216 (376)
T ss_dssp ---CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEEC
T ss_pred eeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEec
Confidence 1 22233357888888899999999999998877653
No 194
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.73 E-value=1.7e-07 Score=66.13 Aligned_cols=111 Identities=14% Similarity=0.053 Sum_probs=86.3
Q ss_pred cCcEEEEEec-----CCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEec----------CCCcEEEEeCcCCe
Q psy16373 53 VSNRVITGSQ-----DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS----------QDGLLCVWDTVTGA 117 (166)
Q Consensus 53 ~~~~l~~~~~-----d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~d~~v~~~d~~~~~ 117 (166)
+++.++.... ++.|.+.|..+++.+.++.....+ . +.++|+++.+..++ .++.|.+||..+.+
T Consensus 43 d~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~ 120 (386)
T 3sjl_D 43 DARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL 120 (386)
T ss_dssp CTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe
Confidence 6666666654 679999999999998888765555 4 99999998877665 35789999999999
Q ss_pred eeEEeeccc-------ccEEEEEEcC--CeEEEeec--CCcEEEEECCcccceeeeeec
Q psy16373 118 CMYSIQAHD-------GCIHALTYSD--SYVISLGQ--DERLCVWDRFQGHLLSTIQLQ 165 (166)
Q Consensus 118 ~~~~~~~~~-------~~v~~i~~~~--~~l~~~~~--d~~i~~wd~~~~~~~~~~~~~ 165 (166)
.+..+.... .....++|+| .+++.+.. ++.|.++|+.+++.+.++.++
T Consensus 121 v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~ 179 (386)
T 3sjl_D 121 PTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP 179 (386)
T ss_dssp EEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred EEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC
Confidence 888875321 1334688888 47777764 689999999999999988764
No 195
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.70 E-value=4.7e-06 Score=55.70 Aligned_cols=116 Identities=16% Similarity=0.087 Sum_probs=87.0
Q ss_pred eEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecc
Q psy16373 47 ITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAH 125 (166)
Q Consensus 47 i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~ 125 (166)
...+.+ .+.+..+.+.++.|+++|+++++.+..+......-..+++..+ ..+.....++.+.++|.++.+.+.++...
T Consensus 57 tqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g~-~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~ 135 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDGE-RLYQLTWTEGLLFTWSGMPPQRERTTRYS 135 (268)
T ss_dssp EEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECSS-CEEEEESSSCEEEEEETTTTEEEEEEECS
T ss_pred cceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeCC-EEEEEEccCCEEEEEECCcCcEEEEEeCC
Confidence 468888 5555667777889999999999888776222222244666543 45555667899999999999999998753
Q ss_pred cccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373 126 DGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 126 ~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
.. -+.+++....|+.+..++.|.++|..+.+.+.++++
T Consensus 136 ~e-GwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 136 GE-GWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp SC-CCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred Cc-eeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 33 356777777888887899999999999999888875
No 196
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.69 E-value=1.4e-06 Score=60.23 Aligned_cols=109 Identities=12% Similarity=0.087 Sum_probs=75.0
Q ss_pred eEEEEecCcEEEEEe---------cCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC---C--cEEEEe
Q psy16373 47 ITVLECVSNRVITGS---------QDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD---G--LLCVWD 112 (166)
Q Consensus 47 i~~~~~~~~~l~~~~---------~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d---~--~v~~~d 112 (166)
+....++++.++... .++.|.+||+.+++.. .+ ..+..+.|+|+++.++..+.+ + .+.+||
T Consensus 17 ~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~ 91 (347)
T 2gop_A 17 LSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKVSEIWVAD 91 (347)
T ss_dssp EEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEE
T ss_pred cccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEE
Confidence 344444677666542 3678999999877643 22 467889999999988877643 3 488889
Q ss_pred CcCCeeeEEeecccccEEEEEEcCC--eEEEeecC---------------------------CcEEEEECCcccceeee
Q psy16373 113 TVTGACMYSIQAHDGCIHALTYSDS--YVISLGQD---------------------------ERLCVWDRFQGHLLSTI 162 (166)
Q Consensus 113 ~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~~d---------------------------~~i~~wd~~~~~~~~~~ 162 (166)
+.+++....... .. +..+.|+|+ .|+.++.+ ..|.+||+.+++.+..+
T Consensus 92 ~~~g~~~~l~~~-~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l 168 (347)
T 2gop_A 92 LETLSSKKILEA-KN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEF 168 (347)
T ss_dssp TTTTEEEEEEEE-SE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEE
T ss_pred CCCCceEEEEcC-CC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeee
Confidence 888776554443 34 899999983 66666532 56999999887763433
No 197
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.66 E-value=1.5e-06 Score=59.98 Aligned_cols=97 Identities=11% Similarity=0.048 Sum_probs=67.9
Q ss_pred CceEEEEe--cCcEEEEEecC---C--eEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC------------
Q psy16373 45 QPITVLEC--VSNRVITGSQD---H--TLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD------------ 105 (166)
Q Consensus 45 ~~i~~~~~--~~~~l~~~~~d---~--~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d------------ 105 (166)
..+..+.| +++.|+..+.+ + .|.+|++.+++........ . +..+.|+|+++.++.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~ 136 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDD 136 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEECTTSSEEEEEEECCCC---------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeECCCCCEEEEEEccCCCcCCcEEEcc
Confidence 34667788 78888877654 3 4777888877654433333 3 8999999999988877532
Q ss_pred ---------------CcEEEEeCcCCeeeEEeecccccEEEEEEcCC-eEEEeecC
Q psy16373 106 ---------------GLLCVWDTVTGACMYSIQAHDGCIHALTYSDS-YVISLGQD 145 (166)
Q Consensus 106 ---------------~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~-~l~~~~~d 145 (166)
..+.+||+.+++.+..+.. . .+..+.|+|+ .++++..+
T Consensus 137 ~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg~~~~~~~~ 190 (347)
T 2gop_A 137 VPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDKIVVNVPHR 190 (347)
T ss_dssp CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTEEEEEEECC
T ss_pred cceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCeEEEEEecc
Confidence 5788999988877455554 3 7788999996 45555443
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.66 E-value=1.3e-05 Score=54.01 Aligned_cols=114 Identities=7% Similarity=-0.046 Sum_probs=76.8
Q ss_pred cCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeE
Q psy16373 43 HHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMY 120 (166)
Q Consensus 43 ~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~ 120 (166)
+...+.++++ ++.+.++...++.|..|+.........+......+.++++.+++..+++...++.+..||. +++...
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~ 133 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE 133 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE
Confidence 3456888888 5666666556789999998622111112224457899999999998888777889999998 554332
Q ss_pred E-eecccccEEEEEEcC-CeEEEee-cCCcEEEEECCcccc
Q psy16373 121 S-IQAHDGCIHALTYSD-SYVISLG-QDERLCVWDRFQGHL 158 (166)
Q Consensus 121 ~-~~~~~~~v~~i~~~~-~~l~~~~-~d~~i~~wd~~~~~~ 158 (166)
. .......+..+++++ +.++.+. .++.|..||. +++.
T Consensus 134 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~ 173 (299)
T 2z2n_A 134 YELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDI 173 (299)
T ss_dssp EECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCE
T ss_pred ecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcE
Confidence 2 222345678899987 3454444 4678999998 5554
No 199
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.61 E-value=4e-06 Score=56.84 Aligned_cols=113 Identities=12% Similarity=0.058 Sum_probs=80.6
Q ss_pred ccCCceEEEEe--cCcEEEEEecCCeEEEEEcc-cccc---eehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC
Q psy16373 42 AHHQPITVLEC--VSNRVITGSQDHTLKVYKLE-DQQL---LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT 115 (166)
Q Consensus 42 ~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~-~~~~---~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 115 (166)
.+......++| +++.+++.+.++.|.+|++. +++. ...+..+...+.+++++++++.+++. ++.|.+||..
T Consensus 169 ~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~- 245 (296)
T 3e5z_A 169 RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD- 245 (296)
T ss_dssp CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-
T ss_pred cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-
Confidence 44455678888 67777777778999999996 4433 22223344556789999999987776 7889999986
Q ss_pred CeeeEEeecccccEEEEEEc-CC--eEEEeecCCcEEEEECCcccce
Q psy16373 116 GACMYSIQAHDGCIHALTYS-DS--YVISLGQDERLCVWDRFQGHLL 159 (166)
Q Consensus 116 ~~~~~~~~~~~~~v~~i~~~-~~--~l~~~~~d~~i~~wd~~~~~~~ 159 (166)
++.+..+..+.. +++++|. ++ .|+.++.+ .+.-++.++.+..
T Consensus 246 g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~-~l~~~~~~~~~~~ 290 (296)
T 3e5z_A 246 GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVST-EFWSIETNVRGLE 290 (296)
T ss_dssp SCEEEEEECSSC-CCEEEEESTTSCEEEEEETT-EEEEEECSCCBCC
T ss_pred CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCC-eEEEEEccccccc
Confidence 777777776666 8899994 53 67777765 4556676665543
No 200
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.61 E-value=5.9e-06 Score=62.83 Aligned_cols=110 Identities=8% Similarity=-0.110 Sum_probs=75.5
Q ss_pred eEEEEe--cCcEEEEEecCCe----------------EEEEEcccccc----eehhcCCCCceEEEEEcCCCCEEEEecC
Q psy16373 47 ITVLEC--VSNRVITGSQDHT----------------LKVYKLEDQQL----LFTLHGHCGPITTLFIDGVSMMSGSGSQ 104 (166)
Q Consensus 47 i~~~~~--~~~~l~~~~~d~~----------------v~v~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 104 (166)
+..++| +++.|+.++.++. |.+|++.+++. +.....+...+..+.++|++++++..+.
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 556788 7888988887765 99999987653 2222234555789999999998887654
Q ss_pred -----CCcEEEEeCcC------Ce-eeEEeecccccEEEEEEcC--CeEEEeecC----CcEEEEECCccc
Q psy16373 105 -----DGLLCVWDTVT------GA-CMYSIQAHDGCIHALTYSD--SYVISLGQD----ERLCVWDRFQGH 157 (166)
Q Consensus 105 -----d~~v~~~d~~~------~~-~~~~~~~~~~~v~~i~~~~--~~l~~~~~d----~~i~~wd~~~~~ 157 (166)
+..+++||+.+ +. ....+..+...+.. .|++ +.++..+.+ ..|.+||+.++.
T Consensus 253 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 253 EGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPE 322 (710)
T ss_dssp CSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred ccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 56899999986 43 35556655555544 3554 555554442 369999998764
No 201
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.58 E-value=9.6e-06 Score=54.15 Aligned_cols=127 Identities=16% Similarity=0.030 Sum_probs=88.9
Q ss_pred eeeeeeeccCCc--eEEEEe-cCcEEEEEecCC--eEEEEEcccccceehhcCCCC-ceEEEEEcCCCCEEEEecCCCcE
Q psy16373 35 CKVESTRAHHQP--ITVLEC-VSNRVITGSQDH--TLKVYKLEDQQLLFTLHGHCG-PITTLFIDGVSMMSGSGSQDGLL 108 (166)
Q Consensus 35 ~~~~~~~~~~~~--i~~~~~-~~~~l~~~~~d~--~v~v~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~d~~v 108 (166)
..+.++ .|... ...+.| ++.++.+.+.+| .|+++|+++++.+..+..... .--.++... ...+.....++.+
T Consensus 32 ~vv~~~-phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g-~~ly~ltw~~~~v 109 (262)
T 3nol_A 32 QIVHSY-PHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWK-DKIVGLTWKNGLG 109 (262)
T ss_dssp EEEEEE-ECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEE
T ss_pred EEEEEe-cCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeC-CEEEEEEeeCCEE
Confidence 344444 34333 467888 555566666665 999999999998877654322 123455543 3444555678899
Q ss_pred EEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373 109 CVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 109 ~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
.++|.++.+.+.++.... .-+.+++..+.|+.+..++.|.++|..+.+.+.++++
T Consensus 110 ~v~D~~t~~~~~ti~~~~-eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDG-EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp EEEETTTCCEEEEEECSS-CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred EEEECccCcEEEEEECCC-CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 999999999999887533 2246667777777777788899999999998888765
No 202
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.56 E-value=2.5e-05 Score=51.68 Aligned_cols=117 Identities=12% Similarity=-0.058 Sum_probs=85.4
Q ss_pred ceEEEEecCcE-EEEEecC--CeEEEEEcccccceehhcCCCC-ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373 46 PITVLECVSNR-VITGSQD--HTLKVYKLEDQQLLFTLHGHCG-PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS 121 (166)
Q Consensus 46 ~i~~~~~~~~~-l~~~~~d--~~v~v~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~ 121 (166)
-...+.|+++. ..+.+.+ ..|+.+|+++++.+..+..... .-..+++.. +..+.....++.+.++|.++.+.+.+
T Consensus 22 ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~~~~v~v~D~~tl~~~~t 100 (243)
T 3mbr_X 22 FTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTWRNHEGFVYDLATLTPRAR 100 (243)
T ss_dssp CEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEESSSSEEEEEETTTTEEEEE
T ss_pred ccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEeeCCEEEEEECCcCcEEEE
Confidence 45688884454 4455554 4999999999998877653322 223445543 44555567789999999999999999
Q ss_pred eecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373 122 IQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 122 ~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
+..... -+.++.....|+.+..++.|.++|..+.+.+.++++
T Consensus 101 i~~~~~-Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 101 FRYPGE-GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp EECSSC-CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EeCCCC-ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 875433 356777777777777889999999999999888875
No 203
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.55 E-value=3.7e-06 Score=59.33 Aligned_cols=109 Identities=11% Similarity=-0.018 Sum_probs=80.4
Q ss_pred cCcEEEEEec--CC---eEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEec----------CCCcEEEEeCcCCe
Q psy16373 53 VSNRVITGSQ--DH---TLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS----------QDGLLCVWDTVTGA 117 (166)
Q Consensus 53 ~~~~l~~~~~--d~---~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~d~~v~~~d~~~~~ 117 (166)
++..++.... .. .|.++|..+++.+..+.....+ .+.++|+++.+..+. .++.+.++|..+.+
T Consensus 31 ~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~ 108 (373)
T 2mad_H 31 DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFL 108 (373)
T ss_pred CCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCc
Confidence 5565555543 22 8899999999888777654444 999999999888875 36789999999888
Q ss_pred eeEEeecc-------cccEEEEEEcC--CeEEEeec--CCcEEEEECCcccceee-eee
Q psy16373 118 CMYSIQAH-------DGCIHALTYSD--SYVISLGQ--DERLCVWDRFQGHLLST-IQL 164 (166)
Q Consensus 118 ~~~~~~~~-------~~~v~~i~~~~--~~l~~~~~--d~~i~~wd~~~~~~~~~-~~~ 164 (166)
.+..+... ......++|+| .+++.++. ++.|.++| .+++.+.+ +..
T Consensus 109 ~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~ 166 (373)
T 2mad_H 109 PIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS 166 (373)
T ss_pred EEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC
Confidence 87766432 12234788998 47777764 47899999 99988877 654
No 204
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.54 E-value=3.2e-05 Score=51.98 Aligned_cols=111 Identities=3% Similarity=-0.101 Sum_probs=75.1
Q ss_pred cCCceEEEEe--cCcEEEEEecCCeEEEEEccccccee-hhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeee
Q psy16373 43 HHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF-TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACM 119 (166)
Q Consensus 43 ~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~ 119 (166)
....+.++++ ++.+.++...++.|.+||. +++... ....+...+.+++++++++.+++...++.|..||. +++ +
T Consensus 181 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~-~ 257 (299)
T 2z2n_A 181 PASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNI-I 257 (299)
T ss_dssp TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTE-E
T ss_pred CCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCc-e
Confidence 3455778888 5666555556789999999 555332 12234567899999999998887767889999998 454 2
Q ss_pred EEe--ecccccEEEEEEcC-CeEEEeecCCcEEEEECCccc
Q psy16373 120 YSI--QAHDGCIHALTYSD-SYVISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 120 ~~~--~~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~~ 157 (166)
..+ ..+...+.++++ + +.++.++..+.|..++.++++
T Consensus 258 ~~~~~~~~~~~~~~i~~-~~g~l~v~~~~~~l~~~~~~~~~ 297 (299)
T 2z2n_A 258 EEYPIQIKSAEPHGICF-DGETIWFAMECDKIGKLTLIKDN 297 (299)
T ss_dssp EEEECSSSSCCEEEEEE-CSSCEEEEETTTEEEEEEEC---
T ss_pred EEEeCCCCCCccceEEe-cCCCEEEEecCCcEEEEEcCccc
Confidence 333 233456788888 6 566666656778888876653
No 205
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.52 E-value=3.3e-06 Score=59.22 Aligned_cols=110 Identities=14% Similarity=0.179 Sum_probs=80.5
Q ss_pred cCcEEEEEecCCeEEEEEcccccceehhcCC---------CCceE-EEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe
Q psy16373 53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH---------CGPIT-TLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI 122 (166)
Q Consensus 53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~---------~~~v~-~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~ 122 (166)
.++.++.++.++.|..+|.++++.+...... ...+. .... .+..+..++.++.+..+|.++++.+...
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~tG~~~W~~ 129 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTSDGTVAWQT 129 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE--eCCEEEEEcCCCEEEEEECCCCCEEEEE
Confidence 6788888888999999999999887655432 12232 2333 3456667788999999999999988776
Q ss_pred ecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373 123 QAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 123 ~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
..............+.++.++.++.|..+|.++|+.+.++..
T Consensus 130 ~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 130 KVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp ECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred eCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeC
Confidence 644332222334467888899999999999999998887764
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.48 E-value=3.2e-05 Score=52.51 Aligned_cols=110 Identities=9% Similarity=0.073 Sum_probs=77.5
Q ss_pred ceEEEEec------CcEEEEE-ecCCeEEEEEcc-ccc-----ceehhcCCC-CceEEEEEcCCCCEEEEecCCCcEEEE
Q psy16373 46 PITVLECV------SNRVITG-SQDHTLKVYKLE-DQQ-----LLFTLHGHC-GPITTLFIDGVSMMSGSGSQDGLLCVW 111 (166)
Q Consensus 46 ~i~~~~~~------~~~l~~~-~~d~~v~v~~~~-~~~-----~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~d~~v~~~ 111 (166)
....++++ ++.++.+ ..++.|.+|+.. +++ ....+..+. ..+..++++++++.+++...++.|.+|
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~ 252 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVF 252 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEE
Confidence 34555554 3345544 467899999986 333 222333343 567889999999998888788899999
Q ss_pred eCcCCeeeEEeecccccEEEEEEcC--CeEEEee-cCCcEEEEECCc
Q psy16373 112 DTVTGACMYSIQAHDGCIHALTYSD--SYVISLG-QDERLCVWDRFQ 155 (166)
Q Consensus 112 d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~~ 155 (166)
|.++++.+..+..+...+.+++|++ +.|+.++ .++.|..|++..
T Consensus 253 d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 253 GPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp CTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred cCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 9987777666666667789999987 3355554 467899999865
No 207
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.48 E-value=7.7e-05 Score=50.14 Aligned_cols=113 Identities=7% Similarity=-0.026 Sum_probs=76.6
Q ss_pred cCCceEEEEe--cCcEEEEEecCCeEEEEEcccccce-ehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeee
Q psy16373 43 HHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLL-FTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACM 119 (166)
Q Consensus 43 ~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~ 119 (166)
....+.++++ ++++.++...++.|..+|.. ++.. ..+......+.++++.+++..+++...++.+..+|.. ++..
T Consensus 60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~ 137 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY 137 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE
T ss_pred CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE
Confidence 3456788888 55666655557889999987 5432 1222234668999999999988887778899999987 5443
Q ss_pred E-EeecccccEEEEEEcC-CeEEEee-cCCcEEEEECCcccc
Q psy16373 120 Y-SIQAHDGCIHALTYSD-SYVISLG-QDERLCVWDRFQGHL 158 (166)
Q Consensus 120 ~-~~~~~~~~v~~i~~~~-~~l~~~~-~d~~i~~wd~~~~~~ 158 (166)
. .+......+..+++++ +.++.+. .++.|..+|. +++.
T Consensus 138 ~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~ 178 (300)
T 2qc5_A 138 EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKL 178 (300)
T ss_dssp EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE
T ss_pred EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcE
Confidence 2 2222345678899987 3455444 4678999987 5443
No 208
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.47 E-value=3.3e-05 Score=54.03 Aligned_cols=114 Identities=9% Similarity=-0.127 Sum_probs=72.2
Q ss_pred ccCCceEEEEe---cCcEEEEEecC------CeEEEEEcccccceehhcCC-CCceEEEEEcCCCCEEEEecCC-----C
Q psy16373 42 AHHQPITVLEC---VSNRVITGSQD------HTLKVYKLEDQQLLFTLHGH-CGPITTLFIDGVSMMSGSGSQD-----G 106 (166)
Q Consensus 42 ~~~~~i~~~~~---~~~~l~~~~~d------~~v~v~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~d-----~ 106 (166)
.+...+..+.| ++..|+..+.+ ..|.+||+..++........ ...+..+.|+|+++.++..+.+ +
T Consensus 185 ~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 264 (396)
T 3c5m_A 185 QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDR 264 (396)
T ss_dssp EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCE
T ss_pred cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccc
Confidence 45566778888 25556665543 36888888765433322211 2357889999999877666433 3
Q ss_pred cEEEEeCcCCeeeEEeecccccEEEEEEcC-C--eEEEee----------------cCCcEEEEECCcccc
Q psy16373 107 LLCVWDTVTGACMYSIQAHDGCIHALTYSD-S--YVISLG----------------QDERLCVWDRFQGHL 158 (166)
Q Consensus 107 ~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~--~l~~~~----------------~d~~i~~wd~~~~~~ 158 (166)
.+.+||+.+++....... .. .. +.|+| + .++.++ .+..|.+||+.+++.
T Consensus 265 ~l~~~d~~~g~~~~l~~~-~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 265 VIYKANPETLENEEVMVM-PP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp EEEEECTTTCCEEEEEEC-CS-EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC
T ss_pred eEEEEECCCCCeEEeeeC-CC-CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce
Confidence 499999988765432221 11 23 78887 4 555543 347899999987764
No 209
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.46 E-value=1.8e-06 Score=61.92 Aligned_cols=111 Identities=13% Similarity=0.006 Sum_probs=85.4
Q ss_pred cCcEEEEEecC-----CeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEec----------CCCcEEEEeCcCCe
Q psy16373 53 VSNRVITGSQD-----HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS----------QDGLLCVWDTVTGA 117 (166)
Q Consensus 53 ~~~~l~~~~~d-----~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~d~~v~~~d~~~~~ 117 (166)
++..++..... +.|.++|..+.+.+.++..-..+ .+.++|+++.+..+. .++.|.++|..+.+
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 56666655542 69999999999999888765555 899999998877765 36789999999999
Q ss_pred eeEEeecc-------cccEEEEEEcC--CeEEEeec--CCcEEEEECCcccceeeeeec
Q psy16373 118 CMYSIQAH-------DGCIHALTYSD--SYVISLGQ--DERLCVWDRFQGHLLSTIQLQ 165 (166)
Q Consensus 118 ~~~~~~~~-------~~~v~~i~~~~--~~l~~~~~--d~~i~~wd~~~~~~~~~~~~~ 165 (166)
.+..+... ......+.|+| .+++.+.. ++.|.+.|+.+++.+.++.++
T Consensus 161 vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~ 219 (426)
T 3c75_H 161 PIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVP 219 (426)
T ss_dssp EEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcC
Confidence 88877532 12234678888 47777764 578999999999999888763
No 210
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.44 E-value=6e-05 Score=50.43 Aligned_cols=115 Identities=12% Similarity=-0.046 Sum_probs=83.2
Q ss_pred EEEEecCcE-EEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecc-
Q psy16373 48 TVLECVSNR-VITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAH- 125 (166)
Q Consensus 48 ~~~~~~~~~-l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~- 125 (166)
..+.+.++. ....-.++.+.++|.++.+.+.++.... .-..++ +++..++.+..++.+.++|.++.+.+..+...
T Consensus 99 eGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~-eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~ 175 (268)
T 3nok_A 99 EGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTRYSG-EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKL 175 (268)
T ss_dssp EEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEECSS-CCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred eEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEeCCC-ceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCC
Confidence 346664444 4444468999999999999988877422 223444 45666666667889999999999888877542
Q ss_pred -cc---cEEEEEEcCCeEEEee-cCCcEEEEECCcccceeeeeec
Q psy16373 126 -DG---CIHALTYSDSYVISLG-QDERLCVWDRFQGHLLSTIQLQ 165 (166)
Q Consensus 126 -~~---~v~~i~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~ 165 (166)
.. .++.+.|....++... .+..|.+-|.++++.+..+.+.
T Consensus 176 ~g~~v~~lNeLe~~dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~ 220 (268)
T 3nok_A 176 RGQPVELINELECANGVIYANIWHSSDVLEIDPATGTVVGVIDAS 220 (268)
T ss_dssp TTEECCCEEEEEEETTEEEEEETTCSEEEEECTTTCBEEEEEECH
T ss_pred CCcccccccccEEeCCEEEEEECCCCeEEEEeCCCCcEEEEEECC
Confidence 22 4567788777777666 5788999999999999988764
No 211
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.44 E-value=0.00012 Score=51.58 Aligned_cols=108 Identities=9% Similarity=-0.113 Sum_probs=77.1
Q ss_pred EEEe--cCcEEEEEe----------cCCeEEEEEcccccceehhcCC-------CCceEEEEEcCCCCEEEEecC--CCc
Q psy16373 49 VLEC--VSNRVITGS----------QDHTLKVYKLEDQQLLFTLHGH-------CGPITTLFIDGVSMMSGSGSQ--DGL 107 (166)
Q Consensus 49 ~~~~--~~~~l~~~~----------~d~~v~v~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~--d~~ 107 (166)
.+.+ +++.++.+. .++.|.++|..+.+.+..+... ......+.++|++++++.++. +..
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 6666 888888875 3678999999988776655321 123458999999999988764 478
Q ss_pred EEEEeCcCCeeeEE-eecccccEEEEEEcCCeEEEeecCCcEEEEECCcccce
Q psy16373 108 LCVWDTVTGACMYS-IQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLL 159 (166)
Q Consensus 108 v~~~d~~~~~~~~~-~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~ 159 (166)
|.++| .+++.+.. +.. ...+....+.+..+++.+.|+.+.++|. +++.+
T Consensus 150 v~viD-~t~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~ 199 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSS-PTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAA 199 (373)
T ss_pred EEEEE-CCCCEEeEEcCC-CceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEE
Confidence 99999 99988877 543 2233222223356677778999999999 77665
No 212
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.44 E-value=4.5e-07 Score=63.62 Aligned_cols=114 Identities=14% Similarity=-0.046 Sum_probs=73.1
Q ss_pred eEEEEe--cCcEEEEEecC---CeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373 47 ITVLEC--VSNRVITGSQD---HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS 121 (166)
Q Consensus 47 i~~~~~--~~~~l~~~~~d---~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~ 121 (166)
+.+++| +++.|+..... ..+.+||+.+++.......+......+.|+|+++.++..+.++.+++||+.+++....
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~ 117 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVI 117 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEE
Confidence 556667 78887766543 4788889988765443332322233478999999999988888999999988876555
Q ss_pred eecccccEEE---E----------------EEcC--CeEEEe-----ecCCcEEEEECCccccee
Q psy16373 122 IQAHDGCIHA---L----------------TYSD--SYVISL-----GQDERLCVWDRFQGHLLS 160 (166)
Q Consensus 122 ~~~~~~~v~~---i----------------~~~~--~~l~~~-----~~d~~i~~wd~~~~~~~~ 160 (166)
...+...... + .|+| +.++.. ..+..|.+||+.+++...
T Consensus 118 ~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~ 182 (396)
T 3c5m_A 118 YTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEV 182 (396)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEE
T ss_pred EecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEe
Confidence 4433332222 2 3344 222222 356689999998876543
No 213
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.41 E-value=5.1e-06 Score=63.14 Aligned_cols=61 Identities=18% Similarity=0.217 Sum_probs=47.6
Q ss_pred CCcEEEEeCcCCeeeEEeecccccEE-EEEEcCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373 105 DGLLCVWDTVTGACMYSIQAHDGCIH-ALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ 165 (166)
Q Consensus 105 d~~v~~~d~~~~~~~~~~~~~~~~v~-~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 165 (166)
+|.+..||+++++.+..+..+..... .+.-..+.++.++.|+.|+.||.++|+.+.+++++
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 37799999999999888765432211 23334578999999999999999999999988764
No 214
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.41 E-value=3.5e-06 Score=63.88 Aligned_cols=110 Identities=16% Similarity=0.170 Sum_probs=80.2
Q ss_pred cEEEEEecCCeEEEEEcccccceehhcCCC-----------Cce------------------------EEEEEcCCCCEE
Q psy16373 55 NRVITGSQDHTLKVYKLEDQQLLFTLHGHC-----------GPI------------------------TTLFIDGVSMMS 99 (166)
Q Consensus 55 ~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~-----------~~v------------------------~~~~~~~~~~~~ 99 (166)
..++.++.+|.+.++|..+++.+..+.... .++ ..++++|+...+
T Consensus 328 ~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~ 407 (677)
T 1kb0_A 328 KVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLV 407 (677)
T ss_dssp EEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEE
T ss_pred eEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEE
Confidence 678899999999999999998876543211 001 146778876666
Q ss_pred EEecC-------------------------------------------CCcEEEEeCcCCeeeEEeecccccEEE--EEE
Q psy16373 100 GSGSQ-------------------------------------------DGLLCVWDTVTGACMYSIQAHDGCIHA--LTY 134 (166)
Q Consensus 100 ~~~~~-------------------------------------------d~~v~~~d~~~~~~~~~~~~~~~~v~~--i~~ 134 (166)
.+... .+.+..||+.+++.+..+.. ..++.. +.-
T Consensus 408 yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~-~~~~~~g~~~~ 486 (677)
T 1kb0_A 408 YLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH-VSPWNGGTLTT 486 (677)
T ss_dssp EEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE-SSSCCCCEEEE
T ss_pred EEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCC-CCCCcCcceEe
Confidence 55422 27899999999998887763 333332 233
Q ss_pred cCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373 135 SDSYVISLGQDERLCVWDRFQGHLLSTIQLQ 165 (166)
Q Consensus 135 ~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 165 (166)
..+.++.++.|+.+++||.++++.+.++.++
T Consensus 487 ~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 517 (677)
T 1kb0_A 487 AGNVVFQGTADGRLVAYHAATGEKLWEAPTG 517 (677)
T ss_dssp TTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CCCEEEEECCCCcEEEEECCCCceeeeeeCC
Confidence 3468888999999999999999999998764
No 215
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.41 E-value=3.7e-05 Score=52.19 Aligned_cols=118 Identities=11% Similarity=0.095 Sum_probs=75.0
Q ss_pred CceEEEEe--cCcEEEEEecC---------------CeEEEEEcccccceehhcCCCCceEEEEEc----CCCCE-EEEe
Q psy16373 45 QPITVLEC--VSNRVITGSQD---------------HTLKVYKLEDQQLLFTLHGHCGPITTLFID----GVSMM-SGSG 102 (166)
Q Consensus 45 ~~i~~~~~--~~~~l~~~~~d---------------~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~-~~~~ 102 (166)
..+.++++ ++++.++...+ +.|..++.. ++... +..+......++++ |+++. +++.
T Consensus 117 ~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~ 194 (314)
T 1pjx_A 117 QGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAE 194 (314)
T ss_dssp BCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEE
T ss_pred cCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE-eccCCCCcceEEEecccCCCCCEEEEEE
Confidence 34778888 56666665544 567777765 43322 22233456889999 99865 4555
Q ss_pred cCCCcEEEEeCc-CCe-----eeEEeeccc-ccEEEEEEcC-CeE-EEeecCCcEEEEECCcccceeeeee
Q psy16373 103 SQDGLLCVWDTV-TGA-----CMYSIQAHD-GCIHALTYSD-SYV-ISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 103 ~~d~~v~~~d~~-~~~-----~~~~~~~~~-~~v~~i~~~~-~~l-~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
..++.|.+||.. +++ ....+..+. .....+++++ ..+ ++...++.|..||..+++.+..+..
T Consensus 195 ~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~ 265 (314)
T 1pjx_A 195 TPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRC 265 (314)
T ss_dssp TTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEEC
T ss_pred CCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeC
Confidence 677899999986 443 222233333 5577899987 344 4444678999999987777665543
No 216
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.39 E-value=5e-06 Score=63.57 Aligned_cols=112 Identities=13% Similarity=-0.007 Sum_probs=75.0
Q ss_pred cCCceEEEEe--cCcEEEEEecC-----CeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCc--------
Q psy16373 43 HHQPITVLEC--VSNRVITGSQD-----HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGL-------- 107 (166)
Q Consensus 43 ~~~~i~~~~~--~~~~l~~~~~d-----~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~-------- 107 (166)
|...+..++| ++++|+.++.+ ..|++||+.+++.+.. ..+...+..++|+|+ +.++.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~ 238 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQA 238 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-EEEEEESCCCEESTT-SEEEEEECCCC--------
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-cCCCceeccEEEECC-CEEEEEEecCccccccccc
Confidence 3346778888 78888876553 4699999999876543 112222357899999 88887776554
Q ss_pred ------EEEEeCcCCee--eEEee--cccccEEEEEEcCC--eEEEeecC-----CcEEEEECCcc
Q psy16373 108 ------LCVWDTVTGAC--MYSIQ--AHDGCIHALTYSDS--YVISLGQD-----ERLCVWDRFQG 156 (166)
Q Consensus 108 ------v~~~d~~~~~~--~~~~~--~~~~~v~~i~~~~~--~l~~~~~d-----~~i~~wd~~~~ 156 (166)
|++|++.++.. ...+. .+...+..+.|+|+ +|+..+.+ ..|.+||+.++
T Consensus 239 ~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 239 LNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred CCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 88999876642 22222 23335788999984 56665543 38999999776
No 217
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.39 E-value=6.6e-05 Score=50.44 Aligned_cols=116 Identities=12% Similarity=0.014 Sum_probs=82.3
Q ss_pred EEEEecCcEEEEEe-cCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeeccc
Q psy16373 48 TVLECVSNRVITGS-QDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHD 126 (166)
Q Consensus 48 ~~~~~~~~~l~~~~-~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~ 126 (166)
..+.+.++.|+.+. .++.+.++|..+.+.+.++......-.. +++++..+..+..++.+.++|..+.+.+..+....
T Consensus 69 eGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g~g--lt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~ 146 (266)
T 2iwa_A 69 EGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDGWG--LATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKY 146 (266)
T ss_dssp EEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECCSSSCCE--EEECSSSEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred EEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECCCCCeEE--EEECCCEEEEECCCCeEEEEECCCCcEEEEEEECC
Confidence 35666555555544 5799999999999888877532122123 44566656566678899999999988887775321
Q ss_pred --c---cEEEEEEcCCeEEEee-cCCcEEEEECCcccceeeeeec
Q psy16373 127 --G---CIHALTYSDSYVISLG-QDERLCVWDRFQGHLLSTIQLQ 165 (166)
Q Consensus 127 --~---~v~~i~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~ 165 (166)
. ..+.+.|....++... .++.|.+-|..+++.+..+.+.
T Consensus 147 ~~~p~~~~nele~~dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~ 191 (266)
T 2iwa_A 147 NGHRVIRLNELEYINGEVWANIWQTDCIARISAKDGTLLGWILLP 191 (266)
T ss_dssp TTEECCCEEEEEEETTEEEEEETTSSEEEEEETTTCCEEEEEECH
T ss_pred CCcccccceeEEEECCEEEEecCCCCeEEEEECCCCcEEEEEECC
Confidence 1 3567788776666665 4789999999999999988763
No 218
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.39 E-value=1.1e-05 Score=55.25 Aligned_cols=112 Identities=10% Similarity=0.026 Sum_probs=79.9
Q ss_pred ceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec
Q psy16373 46 PITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA 124 (166)
Q Consensus 46 ~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~ 124 (166)
.+.++.. .+..++.++.++.+..+|.. ++....+......+.++...+++..++.. +.+..+| .+++.+..+..
T Consensus 138 ~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~ 212 (330)
T 3hxj_A 138 IYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYA 212 (330)
T ss_dssp CCSCCEECTTSCEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECC
T ss_pred eeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEcc
Confidence 3444555 35567778888999999998 77666555555566777777777766554 7899999 77777766665
Q ss_pred ccccEEEEEEcCC-eEEEeecCCcEEEEECCcccceeeee
Q psy16373 125 HDGCIHALTYSDS-YVISLGQDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 125 ~~~~v~~i~~~~~-~l~~~~~d~~i~~wd~~~~~~~~~~~ 163 (166)
....+.++...++ .++.++.++.|..+|. +++.+..+.
T Consensus 213 ~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~-~g~~~~~~~ 251 (330)
T 3hxj_A 213 GYWTVTRPAISEDGTIYVTSLDGHLYAINP-DGTEKWRFK 251 (330)
T ss_dssp SSCCCSCCEECTTSCEEEEETTTEEEEECT-TSCEEEEEE
T ss_pred CCcceeceEECCCCeEEEEcCCCeEEEECC-CCCEeEEee
Confidence 5556777777774 8888888888888874 566665554
No 219
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.38 E-value=7.1e-05 Score=52.96 Aligned_cols=108 Identities=10% Similarity=-0.093 Sum_probs=77.9
Q ss_pred EEe--cCcEEEEEe----------cCCeEEEEEcccccceehhcCC-------CCceEEEEEcCCCCEEEEecC--CCcE
Q psy16373 50 LEC--VSNRVITGS----------QDHTLKVYKLEDQQLLFTLHGH-------CGPITTLFIDGVSMMSGSGSQ--DGLL 108 (166)
Q Consensus 50 ~~~--~~~~l~~~~----------~d~~v~v~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~--d~~v 108 (166)
+.+ ++++++.++ .++.|.+||..+.+.+.++... ......+.++|+++++..+.. ++.|
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence 666 788777765 3678999999999888776422 123567999999998887764 6899
Q ss_pred EEEeCcCCeeeEEeecccccEEEEEEcCCeEEEeecCCcEEEEECCc-ccc
Q psy16373 109 CVWDTVTGACMYSIQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQ-GHL 158 (166)
Q Consensus 109 ~~~d~~~~~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~-~~~ 158 (166)
.++|+.+++.+..+.... ...........+++.+.||.+.+.++.+ ++.
T Consensus 163 sVID~~t~~vv~tI~v~g-~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v 212 (386)
T 3sjl_D 163 GVVDLEGKAFKRMLDVPD-CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTP 212 (386)
T ss_dssp EEEETTTTEEEEEEECCS-EEEEEEEETTEEEEEETTSCEEEEECCSSSCC
T ss_pred EEEECCCCcEEEEEECCC-cceeecCCCceeEEECCCCCEEEEECCCCCeE
Confidence 999999999998885422 1111111235677888899999999876 554
No 220
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.37 E-value=8.3e-05 Score=49.68 Aligned_cols=115 Identities=10% Similarity=0.053 Sum_probs=82.5
Q ss_pred EEEEecCcEEEEEe-cCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecc-
Q psy16373 48 TVLECVSNRVITGS-QDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAH- 125 (166)
Q Consensus 48 ~~~~~~~~~l~~~~-~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~- 125 (166)
..+.+.++.|+... .++.+.++|.++.+.+.++..... -..++ +++..++.+..++.+.++|..+.+.+..+...
T Consensus 90 eGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~e-G~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~ 166 (262)
T 3nol_A 90 EGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGE-GWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTA 166 (262)
T ss_dssp EEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEE
T ss_pred eEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCC-ceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEecc
Confidence 34666555555544 589999999999998888774321 12333 45666666666788999999999888877542
Q ss_pred -c---ccEEEEEEcCCeEEEee-cCCcEEEEECCcccceeeeeec
Q psy16373 126 -D---GCIHALTYSDSYVISLG-QDERLCVWDRFQGHLLSTIQLQ 165 (166)
Q Consensus 126 -~---~~v~~i~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~ 165 (166)
. ..++.+.|....++... .+..|.+.|.++++.+..+.+.
T Consensus 167 ~g~~~~~lNELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~ 211 (262)
T 3nol_A 167 HGEELPELNELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLN 211 (262)
T ss_dssp TTEECCCEEEEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECT
T ss_pred CCccccccceeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECC
Confidence 1 23456778777777666 5789999999999999988864
No 221
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.36 E-value=0.00017 Score=48.50 Aligned_cols=117 Identities=8% Similarity=-0.049 Sum_probs=84.1
Q ss_pred eEEEEecC-cEEEEEec---CCeEEEEEcccccceehhcC-CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373 47 ITVLECVS-NRVITGSQ---DHTLKVYKLEDQQLLFTLHG-HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS 121 (166)
Q Consensus 47 i~~~~~~~-~~l~~~~~---d~~v~v~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~ 121 (166)
...+.+++ ..|+.++. ++.|.++|..+++.+..+.. .......+++.. +..+++.-.++.+.++|..+.+.+..
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~~ 101 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIKN 101 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTEEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEEE
Confidence 57888832 45555442 58999999999998877652 222334566653 35566667789999999999999988
Q ss_pred eecccccEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373 122 IQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 122 ~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
+......-+.++.+...++++..++.|.+.|..+.+.+.++.+
T Consensus 102 i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~V 144 (266)
T 2iwa_A 102 FTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNV 144 (266)
T ss_dssp EECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEE
Confidence 8543122245777667777777889999999999988888765
No 222
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.34 E-value=0.00018 Score=48.28 Aligned_cols=111 Identities=6% Similarity=-0.026 Sum_probs=75.3
Q ss_pred CCceEEEEe--cCcEEEEEecCCeEEEEEccccccee-hhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeE
Q psy16373 44 HQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLF-TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMY 120 (166)
Q Consensus 44 ~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~ 120 (166)
...+.++++ ++.+.++...++.|..+|.. ++... .+......+..+++.++++.+++...++.+..+|. +++...
T Consensus 103 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~ 180 (300)
T 2qc5_A 103 DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE 180 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE
T ss_pred CCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE
Confidence 356788888 56666665557899999987 54332 22324456899999999998887777889999998 554433
Q ss_pred E-eecccccEEEEEEcC-CeEEEee-cCCcEEEEECCccc
Q psy16373 121 S-IQAHDGCIHALTYSD-SYVISLG-QDERLCVWDRFQGH 157 (166)
Q Consensus 121 ~-~~~~~~~v~~i~~~~-~~l~~~~-~d~~i~~wd~~~~~ 157 (166)
. .......+..+++++ +.++.+. ..+.|..||. +++
T Consensus 181 ~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~ 219 (300)
T 2qc5_A 181 YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGE 219 (300)
T ss_dssp EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCc
Confidence 1 222334678899987 4555554 4567999997 444
No 223
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.29 E-value=2.1e-05 Score=56.15 Aligned_cols=111 Identities=10% Similarity=0.089 Sum_probs=78.2
Q ss_pred CceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCC--cEEEEeCcCCeeeE
Q psy16373 45 QPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDG--LLCVWDTVTGACMY 120 (166)
Q Consensus 45 ~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~--~v~~~d~~~~~~~~ 120 (166)
.....+++ +++++++...++.|++||..++.......... ... ++++++++.++.+..++ .+.+++...+....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFK-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCC-BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCC-CCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 35678888 56666666667999999998776554433322 233 99999999888877765 78889887665433
Q ss_pred Ee---ec-ccccEEEEEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373 121 SI---QA-HDGCIHALTYSD--SYVISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 121 ~~---~~-~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~ 157 (166)
.+ .. ....+..++++| ..|+.+..++.|+.||..++.
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~ 251 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE 251 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC
Confidence 33 12 345567899998 467777778899999987665
No 224
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.28 E-value=0.00023 Score=47.09 Aligned_cols=115 Identities=16% Similarity=0.073 Sum_probs=82.4
Q ss_pred EEEEecCcEEE-EEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeeccc
Q psy16373 48 TVLECVSNRVI-TGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHD 126 (166)
Q Consensus 48 ~~~~~~~~~l~-~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~ 126 (166)
..+.+.++.|+ ..-.++.+.++|.++.+.+.++..... -..++ +++..+..+..++.+.++|..+.+.+..+....
T Consensus 68 eGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~-Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~ 144 (243)
T 3mbr_X 68 AGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRYPGE-GWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA 144 (243)
T ss_dssp EEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEECSSC-CCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred eEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeCCCC-ceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc
Confidence 34555445444 444689999999999998888774332 24444 455555555568899999999998888775422
Q ss_pred -----ccEEEEEEcCCeEEEee-cCCcEEEEECCcccceeeeeec
Q psy16373 127 -----GCIHALTYSDSYVISLG-QDERLCVWDRFQGHLLSTIQLQ 165 (166)
Q Consensus 127 -----~~v~~i~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~ 165 (166)
..++.+.+....++... .+..|.+-|.++++.+..+.+.
T Consensus 145 ~g~~~~~lNeLe~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~ 189 (243)
T 3mbr_X 145 GGRPLDNLNELEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQ 189 (243)
T ss_dssp TTEECCCEEEEEEETTEEEEEETTTTEEEEECTTTCBEEEEEECG
T ss_pred CCcccccceeeEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECC
Confidence 24567778777676666 5778999999999999988864
No 225
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.28 E-value=0.00012 Score=49.72 Aligned_cols=121 Identities=12% Similarity=0.066 Sum_probs=74.4
Q ss_pred CceEEEEe--cCcEEEEEecC---------CeEEEEEcccccceehhcCCCCceEEEEEcCCCCEE-EEecCCCcEEEEe
Q psy16373 45 QPITVLEC--VSNRVITGSQD---------HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMS-GSGSQDGLLCVWD 112 (166)
Q Consensus 45 ~~i~~~~~--~~~~l~~~~~d---------~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~d~~v~~~d 112 (166)
..++.+++ ++++.++.... ..-.+|.+........+.......+.++|+|+++.+ ++.+.++.|..||
T Consensus 98 ~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~ 177 (297)
T 3g4e_A 98 NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFD 177 (297)
T ss_dssp EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEe
Confidence 34677888 56655543221 233455554322222222233456889999998755 5556678999998
Q ss_pred C--cCCee-----eEEeecccccEEEEEEcC-CeEEEee-cCCcEEEEECCcccceeeeeec
Q psy16373 113 T--VTGAC-----MYSIQAHDGCIHALTYSD-SYVISLG-QDERLCVWDRFQGHLLSTIQLQ 165 (166)
Q Consensus 113 ~--~~~~~-----~~~~~~~~~~v~~i~~~~-~~l~~~~-~d~~i~~wd~~~~~~~~~~~~~ 165 (166)
+ .++.. ...+..+......+++++ ..++.+. .++.|..||..+++.+..+..+
T Consensus 178 ~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p 239 (297)
T 3g4e_A 178 YDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLP 239 (297)
T ss_dssp ECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECS
T ss_pred ccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECC
Confidence 7 45532 222233345667889987 3454444 5677999999989988877654
No 226
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.26 E-value=0.0002 Score=54.85 Aligned_cols=120 Identities=12% Similarity=-0.012 Sum_probs=75.8
Q ss_pred cCCceEEEEe--cCcEEEEEecCC-----eEEEEEcccc--cceehhcCCCCceEEEEEcCCCCEEEEecC----CCcEE
Q psy16373 43 HHQPITVLEC--VSNRVITGSQDH-----TLKVYKLEDQ--QLLFTLHGHCGPITTLFIDGVSMMSGSGSQ----DGLLC 109 (166)
Q Consensus 43 ~~~~i~~~~~--~~~~l~~~~~d~-----~v~v~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~----d~~v~ 109 (166)
+...+..+.| ++++|+..+.++ .|.+||+.++ +....+..+...+.... .|++..++..+. ++.|.
T Consensus 266 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~ 344 (741)
T 1yr2_A 266 LPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIV 344 (741)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEE
T ss_pred CCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEE
Confidence 3345778888 788888777544 8999999876 31344554544444443 477777776654 34599
Q ss_pred EEeCcCC--eeeEEeecccccEEEEEEcCC-eEEEeecCCcEEEEECC-cccceeeee
Q psy16373 110 VWDTVTG--ACMYSIQAHDGCIHALTYSDS-YVISLGQDERLCVWDRF-QGHLLSTIQ 163 (166)
Q Consensus 110 ~~d~~~~--~~~~~~~~~~~~v~~i~~~~~-~l~~~~~d~~i~~wd~~-~~~~~~~~~ 163 (166)
+||+.++ .....+..+...+..+.|..+ .+++...|+..++|.+. +++.+..+.
T Consensus 345 ~~d~~~~~~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~ 402 (741)
T 1yr2_A 345 RVDLSGSTPRFDTVVPESKDNLESVGIAGNRLFASYIHDAKSQVLAFDLDGKPAGAVS 402 (741)
T ss_dssp EEECSSSSCEEEEEECCCSSEEEEEEEEBTEEEEEEEETTEEEEEEEETTSCEEEECB
T ss_pred EEeCCCCccccEEEecCCCCeEEEEEEECCEEEEEEEECCEEEEEEEeCCCCceeecc
Confidence 9999874 333333444455667777764 66777778877777553 355444443
No 227
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.20 E-value=0.00011 Score=49.85 Aligned_cols=91 Identities=12% Similarity=0.116 Sum_probs=68.1
Q ss_pred CceEEEEe--cCcEEE-EEecCCeEEEEEc--ccccc-----eehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373 45 QPITVLEC--VSNRVI-TGSQDHTLKVYKL--EDQQL-----LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV 114 (166)
Q Consensus 45 ~~i~~~~~--~~~~l~-~~~~d~~v~v~~~--~~~~~-----~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~ 114 (166)
...+.++| +++.|+ +.+.++.|.+|++ .++.. ...+..+......++++++++++++...++.|..||..
T Consensus 149 ~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~ 228 (297)
T 3g4e_A 149 DISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV 228 (297)
T ss_dssp SBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT
T ss_pred ccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC
Confidence 34567888 566554 5556789999987 34432 22222334567899999999988888788899999999
Q ss_pred CCeeeEEeecccccEEEEEEc
Q psy16373 115 TGACMYSIQAHDGCIHALTYS 135 (166)
Q Consensus 115 ~~~~~~~~~~~~~~v~~i~~~ 135 (166)
+++.+..+..+...+++++|.
T Consensus 229 tG~~~~~i~~p~~~~t~~~f~ 249 (297)
T 3g4e_A 229 TGKRLQTVKLPVDKTTSCCFG 249 (297)
T ss_dssp TCCEEEEEECSSSBEEEEEEE
T ss_pred CceEEEEEECCCCCceEEEEe
Confidence 899888888776789999998
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.19 E-value=0.00015 Score=55.08 Aligned_cols=112 Identities=18% Similarity=0.255 Sum_probs=78.6
Q ss_pred cCcEEEEEec------CCeEEEEEcccccceehhcCCCC--------------------------------ceEEEEEcC
Q psy16373 53 VSNRVITGSQ------DHTLKVYKLEDQQLLFTLHGHCG--------------------------------PITTLFIDG 94 (166)
Q Consensus 53 ~~~~l~~~~~------d~~v~v~~~~~~~~~~~~~~~~~--------------------------------~v~~~~~~~ 94 (166)
.++.++.++. ++.|+.+|.++++.+..+..... ....++++|
T Consensus 173 ~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~ 252 (677)
T 1kb0_A 173 FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDA 252 (677)
T ss_dssp ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEET
T ss_pred ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcC
Confidence 4556666553 79999999999988766543211 112567888
Q ss_pred CCCEEEEecCCC-------------------cEEEEeCcCCeeeEEeec--cc--------ccE-EEEEEcC---CeEEE
Q psy16373 95 VSMMSGSGSQDG-------------------LLCVWDTVTGACMYSIQA--HD--------GCI-HALTYSD---SYVIS 141 (166)
Q Consensus 95 ~~~~~~~~~~d~-------------------~v~~~d~~~~~~~~~~~~--~~--------~~v-~~i~~~~---~~l~~ 141 (166)
++..+..+..++ .|..+|.++++.+..++. |. .++ ....... +.++.
T Consensus 253 ~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~ 332 (677)
T 1kb0_A 253 ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILH 332 (677)
T ss_dssp TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEE
T ss_pred CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEE
Confidence 878887776654 599999999999888764 21 122 2222233 57889
Q ss_pred eecCCcEEEEECCcccceeeeee
Q psy16373 142 LGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 142 ~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
++.+|.++++|.++|+.+..++.
T Consensus 333 ~~~~G~l~~lD~~tG~~l~~~~~ 355 (677)
T 1kb0_A 333 APKNGFFFVLDRTNGKFISAKNF 355 (677)
T ss_dssp CCTTSEEEEEETTTCCEEEEEES
T ss_pred ECCCCEEEEEECCCCCEeccccc
Confidence 99999999999999999887653
No 229
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.19 E-value=0.00028 Score=50.63 Aligned_cols=108 Identities=9% Similarity=-0.153 Sum_probs=75.5
Q ss_pred EEEe--cCcEEEEEe----------cCCeEEEEEcccccceehhcCC-------CCceEEEEEcCCCCEEEEecC--CCc
Q psy16373 49 VLEC--VSNRVITGS----------QDHTLKVYKLEDQQLLFTLHGH-------CGPITTLFIDGVSMMSGSGSQ--DGL 107 (166)
Q Consensus 49 ~~~~--~~~~l~~~~----------~d~~v~v~~~~~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~~~~~--d~~ 107 (166)
.+.+ +++.++.+. .++.|.++|..+.+.+.++... ......+.++|+++++..+.. ++.
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~ 201 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPA 201 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCe
Confidence 5666 777777765 4679999999999887776421 123467899999998888764 578
Q ss_pred EEEEeCcCCeeeEEeecccccEEEEEE-cCCeEEEeecCCcEEEEECCcccc
Q psy16373 108 LCVWDTVTGACMYSIQAHDGCIHALTY-SDSYVISLGQDERLCVWDRFQGHL 158 (166)
Q Consensus 108 v~~~d~~~~~~~~~~~~~~~~v~~i~~-~~~~l~~~~~d~~i~~wd~~~~~~ 158 (166)
|.+.|+.+.+.+..+..... ..+.- .+..+++.+.|+.+.+.+..+++.
T Consensus 202 VsVID~~t~kvv~~I~v~g~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v 251 (426)
T 3c75_H 202 VGVVDLEGKTFDRMLDVPDC--YHIFPASPTVFYMNCRDGSLARVDFADGET 251 (426)
T ss_dssp EEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEETTSSEEEEECCTTCC
T ss_pred EEEEECCCCeEEEEEEcCCc--eeeccCCCcEEEEEcCCCCEEEEECCCCcE
Confidence 99999999998888764221 11211 224566667778777777755443
No 230
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.15 E-value=0.00053 Score=46.67 Aligned_cols=137 Identities=7% Similarity=-0.044 Sum_probs=83.5
Q ss_pred EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehh---cC
Q psy16373 8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTL---HG 82 (166)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~---~~ 82 (166)
.+++++..++.+..|+.. .. ...+..+...+..+++ +++++++...++.|.+|+.. ++..... .+
T Consensus 58 ~l~~~d~~~~~i~~~~~~-g~--------~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~ 127 (305)
T 3dr2_A 58 TLVWSDLVGRRVLGWRED-GT--------VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAG 127 (305)
T ss_dssp EEEEEETTTTEEEEEETT-SC--------EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETT
T ss_pred EEEEEECCCCEEEEEeCC-CC--------EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCC
Confidence 355666666666555432 11 1123334566788888 66655555556889999986 4322111 11
Q ss_pred -CCCceEEEEEcCCCCEEEE----ecC-------------CCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEe
Q psy16373 83 -HCGPITTLFIDGVSMMSGS----GSQ-------------DGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISL 142 (166)
Q Consensus 83 -~~~~v~~~~~~~~~~~~~~----~~~-------------d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~ 142 (166)
....+..++++++++.+++ |.. .+.|..+|..+++..... .....+.++|+|+ .|+.+
T Consensus 128 ~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~ 205 (305)
T 3dr2_A 128 KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVS 205 (305)
T ss_dssp EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEE
T ss_pred CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEE
Confidence 1134678999999998886 332 246777887666543332 3345678999984 57766
Q ss_pred ecC------CcEEEEECCcc
Q psy16373 143 GQD------ERLCVWDRFQG 156 (166)
Q Consensus 143 ~~d------~~i~~wd~~~~ 156 (166)
... +.|..|++..+
T Consensus 206 ~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 206 QTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp ECCC---CCCEEEEEEEETT
T ss_pred ecCCcCCCCCEEEEEEecCC
Confidence 654 68999998654
No 231
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.11 E-value=7e-05 Score=51.19 Aligned_cols=114 Identities=11% Similarity=0.051 Sum_probs=75.9
Q ss_pred CceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee
Q psy16373 45 QPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ 123 (166)
Q Consensus 45 ~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~ 123 (166)
..+.++.. .+..+..++ +.+..+| .+++....+......+.++...+++..++ ++.++.+..+|. +++.+..+.
T Consensus 177 ~~~~~~~~d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~~-~g~~~~~~~ 251 (330)
T 3hxj_A 177 AITSAASIGKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYV-TSLDGHLYAINP-DGTEKWRFK 251 (330)
T ss_dssp CCCSCCEECTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEE-EETTTEEEEECT-TSCEEEEEE
T ss_pred CceeeeEEcCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEE-EcCCCeEEEECC-CCCEeEEee
Confidence 34455555 344455555 8889999 67766665555556678888888776555 456777888874 566666655
Q ss_pred cccccEEEEEEc-CCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373 124 AHDGCIHALTYS-DSYVISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 124 ~~~~~v~~i~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
.....+..+... .+.++.++.++.|..+|. +++.+..+..
T Consensus 252 ~~~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~~~~~ 292 (330)
T 3hxj_A 252 TGKRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKWNFET 292 (330)
T ss_dssp CSSCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEEEEEC
T ss_pred CCCCccccceEcCCCeEEEecCCCCEEEECC-CCcEEEEEEc
Confidence 444434445556 368888998989999996 6777666553
No 232
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.10 E-value=0.00022 Score=49.49 Aligned_cols=115 Identities=14% Similarity=0.099 Sum_probs=76.4
Q ss_pred CceEEEEe--cCcEEEEEec--CCeEEEEEcccccceehh-------cCCCCceEEEEEcCCCCEEEEecC-----CCcE
Q psy16373 45 QPITVLEC--VSNRVITGSQ--DHTLKVYKLEDQQLLFTL-------HGHCGPITTLFIDGVSMMSGSGSQ-----DGLL 108 (166)
Q Consensus 45 ~~i~~~~~--~~~~l~~~~~--d~~v~v~~~~~~~~~~~~-------~~~~~~v~~~~~~~~~~~~~~~~~-----d~~v 108 (166)
.....+++ +++.+++... ++.++||.+.+++.. .+ ..+...+..++++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 46778888 6677777532 342555555444332 12 124567899999999887776543 5789
Q ss_pred EEEeCcCCeeeEEeecc------cccEEEEEEcC--CeEEEe-e---cCCcEEEEECCccccee
Q psy16373 109 CVWDTVTGACMYSIQAH------DGCIHALTYSD--SYVISL-G---QDERLCVWDRFQGHLLS 160 (166)
Q Consensus 109 ~~~d~~~~~~~~~~~~~------~~~v~~i~~~~--~~l~~~-~---~d~~i~~wd~~~~~~~~ 160 (166)
.+||+.+++.+..+... ...+..+++++ +.++.+ . .++.|.+||+.+++...
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r 159 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAAR 159 (343)
T ss_dssp EEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEE
T ss_pred EEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEE
Confidence 99999999877666432 23467899985 355444 3 57899999998776544
No 233
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.09 E-value=0.00055 Score=51.94 Aligned_cols=61 Identities=16% Similarity=0.250 Sum_probs=47.5
Q ss_pred CCcEEEEeCcCCeeeEEeecccccE-EEEEEcCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373 105 DGLLCVWDTVTGACMYSIQAHDGCI-HALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ 165 (166)
Q Consensus 105 d~~v~~~d~~~~~~~~~~~~~~~~v-~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 165 (166)
+|.+..||+.+++.+.....+.... ..+....+.++.++.|+.++.||.++++.+.+++++
T Consensus 437 ~g~l~A~D~~tG~~~W~~~~~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~ 498 (668)
T 1kv9_A 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQ 498 (668)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cceEEEEeCCCCcEEEEccCCCCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCC
Confidence 4789999999999888776433221 234445678999999999999999999999988754
No 234
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.09 E-value=0.00083 Score=46.25 Aligned_cols=108 Identities=12% Similarity=-0.021 Sum_probs=67.0
Q ss_pred CCceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc--C--CCCceEEEEEcCCCCEEEEecC------CCcEEEE
Q psy16373 44 HQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH--G--HCGPITTLFIDGVSMMSGSGSQ------DGLLCVW 111 (166)
Q Consensus 44 ~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~--~--~~~~v~~~~~~~~~~~~~~~~~------d~~v~~~ 111 (166)
...+.++.+ ++++++ ++. ..|.+||..+++...... . ....+.++.++|+++.+++... .+.+..+
T Consensus 89 ~~~v~~i~~~~dg~l~v-~~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~ 166 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLI-ASD-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHV 166 (326)
T ss_dssp SSCEEEEEEEETTEEEE-EET-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEE
T ss_pred CCcceEEEEeCCCeEEE-EEC-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEE
Confidence 356888888 555554 444 459999998776432111 1 1245889999999987776532 2455555
Q ss_pred eCcCCeeeEEeecccccEEEEEEcCC--eEEEe-ecCCcEEEEECC--cc
Q psy16373 112 DTVTGACMYSIQAHDGCIHALTYSDS--YVISL-GQDERLCVWDRF--QG 156 (166)
Q Consensus 112 d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~-~~d~~i~~wd~~--~~ 156 (166)
+ +++.. .+.........++|+++ .++.+ +.++.|.+||+. ++
T Consensus 167 ~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 167 A--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTG 213 (326)
T ss_dssp E--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTC
T ss_pred e--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccC
Confidence 5 45433 23223345678999983 45444 456889999985 55
No 235
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.07 E-value=0.00031 Score=50.13 Aligned_cols=104 Identities=13% Similarity=-0.011 Sum_probs=67.5
Q ss_pred EEe--cCcEEEEEecCC--eEEEEEcccccceehh----cCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeE
Q psy16373 50 LEC--VSNRVITGSQDH--TLKVYKLEDQQLLFTL----HGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMY 120 (166)
Q Consensus 50 ~~~--~~~~l~~~~~d~--~v~v~~~~~~~~~~~~----~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~ 120 (166)
+++ +++.|+.+..++ .|.+++...+.....+ ......+.+++++|+ +..++ +..++.|..||..++....
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~~~ 254 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEVTL 254 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCEEE
Confidence 666 777888887765 7888888765443332 213456788999995 55554 6678899999998765322
Q ss_pred E----eeccccc--EEEEEEcC--CeEEEe-ecCCcEEEEECC
Q psy16373 121 S----IQAHDGC--IHALTYSD--SYVISL-GQDERLCVWDRF 154 (166)
Q Consensus 121 ~----~~~~~~~--v~~i~~~~--~~l~~~-~~d~~i~~wd~~ 154 (166)
. ..+.... ...++|+| +.|+.+ ..++.|+.|+..
T Consensus 255 ~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~ 297 (409)
T 3hrp_A 255 IKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPD 297 (409)
T ss_dssp EEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTT
T ss_pred EecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecC
Confidence 2 1122222 23899998 355444 457889999865
No 236
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.04 E-value=7.2e-05 Score=55.70 Aligned_cols=61 Identities=18% Similarity=0.156 Sum_probs=46.3
Q ss_pred CCCcEEEEeCcCCeeeEEeecccccEE--EEEEcCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373 104 QDGLLCVWDTVTGACMYSIQAHDGCIH--ALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ 165 (166)
Q Consensus 104 ~d~~v~~~d~~~~~~~~~~~~~~~~v~--~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 165 (166)
.++.+..||+.+++.+.++.... .+. .+....+.++.++.|+.|+.+|.++++.+.++++.
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CCCeEEEEECCCCCEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 35789999999999887775322 221 12334578888999999999999999999988764
No 237
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.03 E-value=2.6e-05 Score=54.87 Aligned_cols=89 Identities=12% Similarity=-0.080 Sum_probs=69.7
Q ss_pred eEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEec----------CCCcEEEEeCcCCeeeEEeeccc-------c
Q psy16373 65 TLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS----------QDGLLCVWDTVTGACMYSIQAHD-------G 127 (166)
Q Consensus 65 ~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~----------~d~~v~~~d~~~~~~~~~~~~~~-------~ 127 (166)
.|.++|..+++.+.++.....+ .+.++|++..+..+. .++.|.+||+.+++.+..+.... .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 8889999999999888765555 799999988887775 36789999999999999886431 1
Q ss_pred cEEEEEEcC--CeEEEeec--CCcEEE--EECCc
Q psy16373 128 CIHALTYSD--SYVISLGQ--DERLCV--WDRFQ 155 (166)
Q Consensus 128 ~v~~i~~~~--~~l~~~~~--d~~i~~--wd~~~ 155 (166)
....++++| .+++++.. +..+.+ +|..+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 234688888 37777764 456888 89876
No 238
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.03 E-value=0.00049 Score=52.44 Aligned_cols=110 Identities=17% Similarity=0.210 Sum_probs=76.6
Q ss_pred CcEEEEEe------cCCeEEEEEcccccceehhcCC--C-----------------------------CceEEEEEcCCC
Q psy16373 54 SNRVITGS------QDHTLKVYKLEDQQLLFTLHGH--C-----------------------------GPITTLFIDGVS 96 (166)
Q Consensus 54 ~~~l~~~~------~d~~v~v~~~~~~~~~~~~~~~--~-----------------------------~~v~~~~~~~~~ 96 (166)
+..++.++ .++.|..||.++++.+..+... . ..-..++++|+.
T Consensus 167 ~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~ 246 (689)
T 1yiq_A 167 NGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPEL 246 (689)
T ss_dssp TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTT
T ss_pred CCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCC
Confidence 44555544 3789999999999887655420 0 011256788888
Q ss_pred CEEEEecCCCc-------------------EEEEeCcCCeeeEEeec--cc-------cc--EEEEEEcC---CeEEEee
Q psy16373 97 MMSGSGSQDGL-------------------LCVWDTVTGACMYSIQA--HD-------GC--IHALTYSD---SYVISLG 143 (166)
Q Consensus 97 ~~~~~~~~d~~-------------------v~~~d~~~~~~~~~~~~--~~-------~~--v~~i~~~~---~~l~~~~ 143 (166)
..+..+..++. +..+|.++++.+..++. |. .+ +..+.+.. +.++.++
T Consensus 247 ~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~ 326 (689)
T 1yiq_A 247 NLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAP 326 (689)
T ss_dssp TEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECC
T ss_pred CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEEC
Confidence 88888877763 99999999999888764 21 11 12233333 2788899
Q ss_pred cCCcEEEEECCcccceeeee
Q psy16373 144 QDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 144 ~d~~i~~wd~~~~~~~~~~~ 163 (166)
.+|.++++|.++|+.+...+
T Consensus 327 ~~G~l~~lD~~tG~~l~~~~ 346 (689)
T 1yiq_A 327 KNGFFYVIDRATGELLSAKG 346 (689)
T ss_dssp TTSEEEEEETTTCCEEEEEE
T ss_pred CCCeEEEEECCCCCEecccc
Confidence 99999999999999986544
No 239
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.03 E-value=0.0015 Score=47.09 Aligned_cols=147 Identities=8% Similarity=0.004 Sum_probs=93.0
Q ss_pred ccceEEEEecCCCceEEEeecccccceeeceeeeeeee--------ccCCceEEEEe--cCcEEEEEecC------CeEE
Q psy16373 4 SVHRIHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTR--------AHHQPITVLEC--VSNRVITGSQD------HTLK 67 (166)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~i~~~~~--~~~~l~~~~~d------~~v~ 67 (166)
..+++++++|..++.|.+.+........ +...+++ +... -..+.. ++ .++++..+ +.+.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p---~~~k~ie~~~~~~~~g~s~-Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~ 167 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREP---KIIKVIEPEEVKKVSGYSR-LHTVHCGPDA-IYISALGNEEGEGPGGIL 167 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSC---EEEEEECHHHHHHHHCEEE-EEEEEECSSC-EEEEEEEETTSCSCCEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCc---eeeeeechhhcccccCCCc-ccceeECCCe-EEEEcCCCcCCCCCCeEE
Confidence 3478899999999988887764322111 1111221 1111 122333 55 66665555 7899
Q ss_pred EEEcccccceehhcCCC---CceEEEEEcCCCCEEEEec-------------------CCCcEEEEeCcCCeeeEEeecc
Q psy16373 68 VYKLEDQQLLFTLHGHC---GPITTLFIDGVSMMSGSGS-------------------QDGLLCVWDTVTGACMYSIQAH 125 (166)
Q Consensus 68 v~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~-------------------~d~~v~~~d~~~~~~~~~~~~~ 125 (166)
++|.++.+.+.++.... ..-..+.|+|+++.+++.. .+.+|.+||+.+++.+.++...
T Consensus 168 vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 168 MLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp EECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred EEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 99999998887776321 2235688899999888874 3679999999998888887653
Q ss_pred -c-ccEEEEEE--cCC--eEEEee------cCCcEEEEECCc
Q psy16373 126 -D-GCIHALTY--SDS--YVISLG------QDERLCVWDRFQ 155 (166)
Q Consensus 126 -~-~~v~~i~~--~~~--~l~~~~------~d~~i~~wd~~~ 155 (166)
. .....+.| +|+ +.+.++ .+++|.+|....
T Consensus 248 ~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~ 289 (462)
T 2ece_A 248 EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED 289 (462)
T ss_dssp TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET
T ss_pred CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC
Confidence 1 23345555 773 555554 566787765543
No 240
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.03 E-value=6.8e-05 Score=57.01 Aligned_cols=114 Identities=16% Similarity=0.043 Sum_probs=74.0
Q ss_pred ccCCceEEEEe--cCcEEEE-----EecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCC--------
Q psy16373 42 AHHQPITVLEC--VSNRVIT-----GSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDG-------- 106 (166)
Q Consensus 42 ~~~~~i~~~~~--~~~~l~~-----~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~-------- 106 (166)
++...+..++| ++++|+- |+....|++||+.+++.+.. .........++|+ +++.++.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~ 203 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSA 203 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TTTEEEEEESSCCC------
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CCCEEEEEEecCcccccccc
Confidence 35556778888 7887774 33346799999999876543 1111113567899 998888777663
Q ss_pred -----cEEEEeCcCCe----eeEEeec-ccccEEEEEEcCC--eE-EEeec---CCcEEEEECCccc
Q psy16373 107 -----LLCVWDTVTGA----CMYSIQA-HDGCIHALTYSDS--YV-ISLGQ---DERLCVWDRFQGH 157 (166)
Q Consensus 107 -----~v~~~d~~~~~----~~~~~~~-~~~~v~~i~~~~~--~l-~~~~~---d~~i~~wd~~~~~ 157 (166)
.|++|++.+.. .+..... +......+.|+|+ +| ++... ++.|.++|+.++.
T Consensus 204 ~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~ 270 (693)
T 3iuj_A 204 RTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQEN 270 (693)
T ss_dssp -CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTT
T ss_pred cCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCC
Confidence 39999987664 2333333 3445678899984 44 33332 3589999987763
No 241
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.02 E-value=8.2e-05 Score=55.53 Aligned_cols=60 Identities=22% Similarity=0.232 Sum_probs=46.5
Q ss_pred CCcEEEEeCcCCeeeEEeecccccEE--EEEEcCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373 105 DGLLCVWDTVTGACMYSIQAHDGCIH--ALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ 165 (166)
Q Consensus 105 d~~v~~~d~~~~~~~~~~~~~~~~v~--~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 165 (166)
+|.+..||+.+++.+.+..... ++. .+....+.++.++.|+.++.||.++|+.+.+++++
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~ 526 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTG 526 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCC
Confidence 5789999999999887765432 221 23334578888999999999999999999988764
No 242
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.97 E-value=0.00015 Score=54.35 Aligned_cols=61 Identities=16% Similarity=0.189 Sum_probs=46.5
Q ss_pred CCCcEEEEeCcCCeeeEEeecccccEE--EEEEcCCeEEEeecCCcEEEEECCcccceeeeeec
Q psy16373 104 QDGLLCVWDTVTGACMYSIQAHDGCIH--ALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQLQ 165 (166)
Q Consensus 104 ~d~~v~~~d~~~~~~~~~~~~~~~~v~--~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 165 (166)
.+|.+..||+.+++.+...... .+.. .+.-..+.++.++.|+.|+.||.++|+.+.+++++
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~ 513 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIP 513 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred CcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCC
Confidence 3578999999999888776422 1221 13445578888999999999999999999988764
No 243
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=97.95 E-value=0.001 Score=50.65 Aligned_cols=110 Identities=14% Similarity=0.030 Sum_probs=68.8
Q ss_pred EEEe-cCcEEEEEecCC-------------eEEEEEcccccc----eehhcC-CCCceEEEEEcCCCCEEEEec----CC
Q psy16373 49 VLEC-VSNRVITGSQDH-------------TLKVYKLEDQQL----LFTLHG-HCGPITTLFIDGVSMMSGSGS----QD 105 (166)
Q Consensus 49 ~~~~-~~~~l~~~~~d~-------------~v~v~~~~~~~~----~~~~~~-~~~~v~~~~~~~~~~~~~~~~----~d 105 (166)
.++| +++.|+.++.+. .|.+|++.+... +..... +......+.++|++++++... .+
T Consensus 179 ~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~ 258 (693)
T 3iuj_A 179 GISWLGNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSG 258 (693)
T ss_dssp CCEEETTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSC
T ss_pred cEEEeCCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCC
Confidence 3445 788888887774 499999976542 223233 334567899999998875432 23
Q ss_pred CcEEEEeCcCCe-eeEEeecccccEEEEEE-cCCeE-EEeecC---CcEEEEECCcccc
Q psy16373 106 GLLCVWDTVTGA-CMYSIQAHDGCIHALTY-SDSYV-ISLGQD---ERLCVWDRFQGHL 158 (166)
Q Consensus 106 ~~v~~~d~~~~~-~~~~~~~~~~~v~~i~~-~~~~l-~~~~~d---~~i~~wd~~~~~~ 158 (166)
..++++|+.++. ....+..+......... ..+.+ +....+ +.|..+|+.++..
T Consensus 259 ~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~ 317 (693)
T 3iuj_A 259 NRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGP 317 (693)
T ss_dssp CEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCG
T ss_pred cEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCc
Confidence 589999997763 34455555554444322 23444 444333 5799999987654
No 244
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.92 E-value=0.00015 Score=52.24 Aligned_cols=110 Identities=10% Similarity=0.150 Sum_probs=77.4
Q ss_pred CcE-EEEEecCCeEEEEEcccc----cceehhc-------CCCCceEEEEEcCCCCEEEEecCC------CcEEEEeCcC
Q psy16373 54 SNR-VITGSQDHTLKVYKLEDQ----QLLFTLH-------GHCGPITTLFIDGVSMMSGSGSQD------GLLCVWDTVT 115 (166)
Q Consensus 54 ~~~-l~~~~~d~~v~v~~~~~~----~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~d------~~v~~~d~~~ 115 (166)
.++ ++.+-.+++|.++|+.+. +....+. .....-..+...|++ .++++..+ +.+.+.|.++
T Consensus 95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T 173 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYS 173 (462)
T ss_dssp SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTT
T ss_pred CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCC
Confidence 444 555667899999999755 3333331 112245667788999 66666555 7899999999
Q ss_pred CeeeEEeeccccc---EEEEEEcC--CeEEEee-------------------cCCcEEEEECCcccceeeeee
Q psy16373 116 GACMYSIQAHDGC---IHALTYSD--SYVISLG-------------------QDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 116 ~~~~~~~~~~~~~---v~~i~~~~--~~l~~~~-------------------~d~~i~~wd~~~~~~~~~~~~ 164 (166)
.+.+..+.....+ -..+.|+| +.+++.. .+.+|.+||+.+++.++++.+
T Consensus 174 ~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 174 FEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp CCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred CeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 9999888633222 34577787 5777774 368999999999888888876
No 245
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.91 E-value=0.0021 Score=44.25 Aligned_cols=98 Identities=10% Similarity=0.037 Sum_probs=67.6
Q ss_pred ceEEEEe--cCcEEEEE-ecCCeEEEEEcc--cc-cc-----eehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373 46 PITVLEC--VSNRVITG-SQDHTLKVYKLE--DQ-QL-----LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV 114 (166)
Q Consensus 46 ~i~~~~~--~~~~l~~~-~~d~~v~v~~~~--~~-~~-----~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~ 114 (166)
....++| +++.++.+ +.++.|.+|++. ++ +. ...+.........++++++++++++...++.|..||.
T Consensus 180 ~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~- 258 (326)
T 2ghs_A 180 IPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT- 258 (326)
T ss_dssp SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-
T ss_pred ccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-
Confidence 4567777 56666544 457899999986 45 32 1222223455788999999988887767788999998
Q ss_pred CCeeeEEeecccccEEEEEEc-C--CeEEEeec
Q psy16373 115 TGACMYSIQAHDGCIHALTYS-D--SYVISLGQ 144 (166)
Q Consensus 115 ~~~~~~~~~~~~~~v~~i~~~-~--~~l~~~~~ 144 (166)
+++.+..+..+...+++++|. + +.|+.++.
T Consensus 259 ~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 259 DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred CCCEEEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence 677777776666678999998 5 35544443
No 246
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.83 E-value=0.0012 Score=50.06 Aligned_cols=111 Identities=19% Similarity=0.226 Sum_probs=76.7
Q ss_pred cCcEEEEEec------CCeEEEEEcccccceehhcCC--C-----------------------------CceEEEEEcCC
Q psy16373 53 VSNRVITGSQ------DHTLKVYKLEDQQLLFTLHGH--C-----------------------------GPITTLFIDGV 95 (166)
Q Consensus 53 ~~~~l~~~~~------d~~v~v~~~~~~~~~~~~~~~--~-----------------------------~~v~~~~~~~~ 95 (166)
.+..++.+.. ++.|..+|.++++.+.++... . .....++++|+
T Consensus 161 ~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~ 240 (668)
T 1kv9_A 161 VKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPE 240 (668)
T ss_dssp ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETT
T ss_pred ECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCC
Confidence 3455555543 589999999999887665421 0 01124678887
Q ss_pred CCEEEEecCCC-------------------cEEEEeCcCCeeeEEeec--cc-------ccE--EEEEEcC---CeEEEe
Q psy16373 96 SMMSGSGSQDG-------------------LLCVWDTVTGACMYSIQA--HD-------GCI--HALTYSD---SYVISL 142 (166)
Q Consensus 96 ~~~~~~~~~d~-------------------~v~~~d~~~~~~~~~~~~--~~-------~~v--~~i~~~~---~~l~~~ 142 (166)
...+..+..++ .|..+|.++++.+..++. |. .+. ..+.+.. +.++.+
T Consensus 241 ~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~ 320 (668)
T 1kv9_A 241 LDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQA 320 (668)
T ss_dssp TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEEC
T ss_pred CCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEE
Confidence 77777777665 399999999999888764 21 222 2333443 268899
Q ss_pred ecCCcEEEEECCcccceeeee
Q psy16373 143 GQDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 143 ~~d~~i~~wd~~~~~~~~~~~ 163 (166)
+.+|.++++|.++|+.+..++
T Consensus 321 ~~~G~l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 321 PKNGFFYVLDRTNGKLISAEK 341 (668)
T ss_dssp CTTSEEEEEETTTCCEEEEEE
T ss_pred CCCCEEEEEECCCCCEecccc
Confidence 999999999999999886544
No 247
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.77 E-value=0.0004 Score=52.06 Aligned_cols=112 Identities=13% Similarity=0.052 Sum_probs=75.8
Q ss_pred cCcEEEEEec-CCeEEEEEc-ccccceehhcCCCC-----------ceEEEEEcCCCCE----EEEecCCCcEEEEeCcC
Q psy16373 53 VSNRVITGSQ-DHTLKVYKL-EDQQLLFTLHGHCG-----------PITTLFIDGVSMM----SGSGSQDGLLCVWDTVT 115 (166)
Q Consensus 53 ~~~~l~~~~~-d~~v~v~~~-~~~~~~~~~~~~~~-----------~v~~~~~~~~~~~----~~~~~~d~~v~~~d~~~ 115 (166)
.+..++.++. ++.|.-+|. .+++.+.++..... ....+++.|.+.. ++.++.|+.+..+|.++
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~T 140 (599)
T 1w6s_A 61 VDGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAET 140 (599)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTT
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCC
Confidence 4667777777 899999999 89988766543221 0123455433333 77778899999999999
Q ss_pred CeeeEEeecccc----cEE-EEEEcCCeEEEeec------CCcEEEEECCcccceeeeee
Q psy16373 116 GACMYSIQAHDG----CIH-ALTYSDSYVISLGQ------DERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 116 ~~~~~~~~~~~~----~v~-~i~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~ 164 (166)
++.+........ .+. ......+.++.++. ++.|+.+|.++|+.+.++..
T Consensus 141 G~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 141 GETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp CCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 998877643220 111 11223456666653 79999999999999988764
No 248
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.75 E-value=0.0023 Score=44.36 Aligned_cols=111 Identities=10% Similarity=0.029 Sum_probs=72.6
Q ss_pred ccCCceEEEEe--cCcEEEEEec-----CCeEEEEEcccccceehhcC------CCCceEEEEEcCC-CCEEEEec---C
Q psy16373 42 AHHQPITVLEC--VSNRVITGSQ-----DHTLKVYKLEDQQLLFTLHG------HCGPITTLFIDGV-SMMSGSGS---Q 104 (166)
Q Consensus 42 ~~~~~i~~~~~--~~~~l~~~~~-----d~~v~v~~~~~~~~~~~~~~------~~~~v~~~~~~~~-~~~~~~~~---~ 104 (166)
.+...+..+++ +++++++-.. +..|.+||+.+++.+..+.. +...+..++++++ +..+++.. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 45567899999 3444444333 57999999998876655432 2235689999976 55556655 5
Q ss_pred CCcEEEEeCcCCeeeEEeeccc-----------------------------ccEEEEEEcCC--eEEEeecCC-cEEEEE
Q psy16373 105 DGLLCVWDTVTGACMYSIQAHD-----------------------------GCIHALTYSDS--YVISLGQDE-RLCVWD 152 (166)
Q Consensus 105 d~~v~~~d~~~~~~~~~~~~~~-----------------------------~~v~~i~~~~~--~l~~~~~d~-~i~~wd 152 (166)
++.|.+||+.+++....+..|. ..+..++|+|+ .|+.+..++ .+..++
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 7899999998776655443221 13577999983 677776655 444444
No 249
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.72 E-value=0.0022 Score=43.60 Aligned_cols=116 Identities=6% Similarity=-0.102 Sum_probs=75.1
Q ss_pred eeeccCCceEEEEe--cCc-EEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC
Q psy16373 39 STRAHHQPITVLEC--VSN-RVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT 115 (166)
Q Consensus 39 ~~~~~~~~i~~~~~--~~~-~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 115 (166)
.+...........| +++ ++++...++.|..|+.. ++ ...+..+...+..++++++++++++...++.|..|+..
T Consensus 39 ~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~- 115 (305)
T 3dr2_A 39 TLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD- 115 (305)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred EEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-
Confidence 34444455677888 566 56777778999999884 43 33444456678999999999987776666889999975
Q ss_pred CeeeEEeecc-----cccEEEEEEcCC-eEEE-----eec-------------CCcEEEEECCcccc
Q psy16373 116 GACMYSIQAH-----DGCIHALTYSDS-YVIS-----LGQ-------------DERLCVWDRFQGHL 158 (166)
Q Consensus 116 ~~~~~~~~~~-----~~~v~~i~~~~~-~l~~-----~~~-------------d~~i~~wd~~~~~~ 158 (166)
++.. .+..+ ...+..++++++ .++. +.. .+.|..+|..+++.
T Consensus 116 g~~~-~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~ 181 (305)
T 3dr2_A 116 GQAH-LLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL 181 (305)
T ss_dssp SCEE-EEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC
T ss_pred CCEE-EEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE
Confidence 5432 22111 124567888873 3443 321 25678888766654
No 250
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.52 E-value=0.00082 Score=50.07 Aligned_cols=110 Identities=13% Similarity=0.074 Sum_probs=74.4
Q ss_pred cCcEEEEEec-CCeEEEEEc-ccccceehhcCCCC----------c-eEEEEEcCCCCEEEEecCCCcEEEEeCcCCeee
Q psy16373 53 VSNRVITGSQ-DHTLKVYKL-EDQQLLFTLHGHCG----------P-ITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACM 119 (166)
Q Consensus 53 ~~~~l~~~~~-d~~v~v~~~-~~~~~~~~~~~~~~----------~-v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~ 119 (166)
.+..++.++. ++.|..+|. .+++.+.++..... . ...+.+ .+..++.++.|+.+..+|.++++.+
T Consensus 61 ~~g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~ 138 (571)
T 2ad6_A 61 IGDMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKIN 138 (571)
T ss_dssp ETTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred ECCEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEE
Confidence 4667777777 899999999 89988766542211 0 011223 2456777788999999999999988
Q ss_pred EEeecccc----cEE-EEEEcCCeEEEeec------CCcEEEEECCcccceeeeee
Q psy16373 120 YSIQAHDG----CIH-ALTYSDSYVISLGQ------DERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 120 ~~~~~~~~----~v~-~i~~~~~~l~~~~~------d~~i~~wd~~~~~~~~~~~~ 164 (166)
........ .+. ......+.++.++. ++.|..+|.++|+.+.++..
T Consensus 139 W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 139 WEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp EEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 77653210 111 11123466666665 78999999999999988764
No 251
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.44 E-value=0.0011 Score=46.64 Aligned_cols=75 Identities=11% Similarity=-0.082 Sum_probs=57.4
Q ss_pred EEEcCCCCEEEEecC---------CCcEEEEeCcCCeeeEEeecccccEEEEEEcCC---eEEEee-cCCcEEEEECCcc
Q psy16373 90 LFIDGVSMMSGSGSQ---------DGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS---YVISLG-QDERLCVWDRFQG 156 (166)
Q Consensus 90 ~~~~~~~~~~~~~~~---------d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~---~l~~~~-~d~~i~~wd~~~~ 156 (166)
+.++|++..+..+.. +..+.++|+.+.+.+..+.... ....++|+++ .+++.. .++.|.++|+.++
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~ 347 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASD 347 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSC
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCC
Confidence 678999776665432 2356699999999988886533 5788999983 456666 5899999999999
Q ss_pred cceeeeeec
Q psy16373 157 HLLSTIQLQ 165 (166)
Q Consensus 157 ~~~~~~~~~ 165 (166)
+.+.++...
T Consensus 348 kvv~~I~vg 356 (368)
T 1mda_H 348 QDQSSVELD 356 (368)
T ss_dssp EEEEECCCC
T ss_pred cEEEEEECC
Confidence 999988754
No 252
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.43 E-value=0.00038 Score=48.42 Aligned_cols=111 Identities=11% Similarity=0.153 Sum_probs=73.8
Q ss_pred CcEEEEEecCCeEEEEEcccccceehhcCC-CCceEEEEE--cC-CCCEEEEe-cCCCcEEEEeCcCCeeeEEeecc---
Q psy16373 54 SNRVITGSQDHTLKVYKLEDQQLLFTLHGH-CGPITTLFI--DG-VSMMSGSG-SQDGLLCVWDTVTGACMYSIQAH--- 125 (166)
Q Consensus 54 ~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~-~~~v~~~~~--~~-~~~~~~~~-~~d~~v~~~d~~~~~~~~~~~~~--- 125 (166)
++.++.++.||.|.-+|.++|+.+.++... ..++....- .+ ++..++.. ..||.+..++..++.....+...
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccce
Confidence 457888999999999999999888776643 122222110 01 22334343 68999999999888655544321
Q ss_pred -cccEEE---EEE-------cCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373 126 -DGCIHA---LTY-------SDSYVISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 126 -~~~v~~---i~~-------~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
.+++.. ... ..+.+++++.++.+...|+++|+.+.++..
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 112221 011 446889999999999999999999988764
No 253
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.11 E-value=0.026 Score=37.38 Aligned_cols=117 Identities=9% Similarity=-0.010 Sum_probs=74.6
Q ss_pred ceEEEEe--cCcEEEEEec---CCeEEEEEcccccceehhc-CCCCceEEEEEcCCCC-EEEEecCCCcEEEEeCcCCee
Q psy16373 46 PITVLEC--VSNRVITGSQ---DHTLKVYKLEDQQLLFTLH-GHCGPITTLFIDGVSM-MSGSGSQDGLLCVWDTVTGAC 118 (166)
Q Consensus 46 ~i~~~~~--~~~~l~~~~~---d~~v~v~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~-~~~~~~~d~~v~~~d~~~~~~ 118 (166)
....+++ ++..|+.+.. .+.|..+++.... ...+. ........+++++++. .+++....+.|..+|......
T Consensus 123 ~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~ 201 (267)
T 1npe_A 123 NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGR 201 (267)
T ss_dssp SEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEE
T ss_pred CccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCce
Confidence 4567778 3566655553 3688888876332 22221 2234578999999754 556666678999999875443
Q ss_pred eEEeecccccEEEEEEcCCeEEEee-cCCcEEEEECCcccceeeeee
Q psy16373 119 MYSIQAHDGCIHALTYSDSYVISLG-QDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 119 ~~~~~~~~~~v~~i~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~~ 164 (166)
...+... .....++...+.++.+. ..+.|..+|..+++.+.++..
T Consensus 202 ~~~~~~~-~~P~gi~~d~~~lyva~~~~~~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 202 RKVLEGL-QYPFAVTSYGKNLYYTDWKTNSVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp EEEEECC-CSEEEEEEETTEEEEEETTTTEEEEEETTTTEEEEEECC
T ss_pred EEEecCC-CCceEEEEeCCEEEEEECCCCeEEEEeCCCCCceEEEcc
Confidence 3333322 22356666666666666 457899999999988887754
No 254
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.03 E-value=0.0081 Score=44.93 Aligned_cols=109 Identities=15% Similarity=0.060 Sum_probs=71.2
Q ss_pred cCcEEEEEecCCeEEEEEcccccceehhcCCCCc---------eEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee
Q psy16373 53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGP---------ITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ 123 (166)
Q Consensus 53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~---------v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~ 123 (166)
.+..++.++.++.|..+|.++++.+.++...... ...+.+ .+..++.++.|+.+..+|.++++.+....
T Consensus 67 ~~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~--~~~~v~~~t~dg~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 67 SDGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAI--YGDKVFFGTLDASVVALNKNTGKVVWKKK 144 (582)
T ss_dssp ETTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEE--ETTEEEEEETTTEEEEEESSSCCEEEEEE
T ss_pred ECCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEE--ECCEEEEEeCCCEEEEEECCCCCEEeeec
Confidence 4666666666455999999999887766533211 011222 24566677889999999999999887765
Q ss_pred cccc----cEE-EEEEcCC------eEEEeec------CCcEEEEECCcccceeeee
Q psy16373 124 AHDG----CIH-ALTYSDS------YVISLGQ------DERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 124 ~~~~----~v~-~i~~~~~------~l~~~~~------d~~i~~wd~~~~~~~~~~~ 163 (166)
.... .+. ......+ .+++++. ++.|..+|.++|+.+.+..
T Consensus 145 ~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~ 201 (582)
T 1flg_A 145 FADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRP 201 (582)
T ss_dssp CSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEE
T ss_pred CCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecC
Confidence 4321 111 1111223 6666653 7899999999999988664
No 255
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.02 E-value=0.075 Score=41.10 Aligned_cols=113 Identities=13% Similarity=0.104 Sum_probs=76.0
Q ss_pred CCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhc--------CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373 44 HQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLH--------GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV 114 (166)
Q Consensus 44 ~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~ 114 (166)
...|.++.. ....|..|+.++.+..|+..+++...-.. .....|.++...+++..+..|+.++-+..+|.+
T Consensus 356 ~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~ 435 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRN 435 (795)
T ss_dssp CSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETT
T ss_pred CCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCC
Confidence 346888888 45567788888889999987654322111 123568999988888834456666678999988
Q ss_pred CCeeeEEee----cccccEEEEEEcC-CeEEEeecCCcEEEEECCccc
Q psy16373 115 TGACMYSIQ----AHDGCIHALTYSD-SYVISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 115 ~~~~~~~~~----~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~~ 157 (166)
+++...... .....|.++...+ +.|+.++. +.|..||..+++
T Consensus 436 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~ 482 (795)
T 4a2l_A 436 SGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQRS 482 (795)
T ss_dssp TCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTTE
T ss_pred CCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCCe
Confidence 765332211 1235688888876 57777776 458889887654
No 256
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.85 E-value=0.072 Score=38.31 Aligned_cols=101 Identities=13% Similarity=0.204 Sum_probs=70.7
Q ss_pred cCcEEEEEecCCeEEEEEcccccceehhcCC----CCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe-----------
Q psy16373 53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGH----CGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA----------- 117 (166)
Q Consensus 53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~----------- 117 (166)
++..++.+- ++.||..++......+.+... -..+..+..+|+|.+++..+ +..|.+..+..+.
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccc
Confidence 666666543 478888888754444444332 22577899999999999875 5578888876321
Q ss_pred -eeEEeec------ccccEEEEEEcC-----CeEEEeecCCcEEEEECCc
Q psy16373 118 -CMYSIQA------HDGCIHALTYSD-----SYVISLGQDERLCVWDRFQ 155 (166)
Q Consensus 118 -~~~~~~~------~~~~v~~i~~~~-----~~l~~~~~d~~i~~wd~~~ 155 (166)
..+.+.- ...+|..+.|+| ..|++-..|+.|++||+..
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 1122321 246799999999 3899999999999999986
No 257
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.58 E-value=0.035 Score=42.02 Aligned_cols=105 Identities=10% Similarity=0.039 Sum_probs=63.9
Q ss_pred cCcEEEEEecCC-----------eEEEEEccccccee--hhc-CCCCceEEEEEcCCCCEEEEecC-CCcEEEEeCcCCe
Q psy16373 53 VSNRVITGSQDH-----------TLKVYKLEDQQLLF--TLH-GHCGPITTLFIDGVSMMSGSGSQ-DGLLCVWDTVTGA 117 (166)
Q Consensus 53 ~~~~l~~~~~d~-----------~v~v~~~~~~~~~~--~~~-~~~~~v~~~~~~~~~~~~~~~~~-d~~v~~~d~~~~~ 117 (166)
++..++.|+.+. .+.+||..+++... .+. .+.....+.++..++..++.|+. +..+.+||..+.+
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~ 276 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDS 276 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTE
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCc
Confidence 566777776432 58889998765322 221 12233445677788899999884 4589999988764
Q ss_pred ee--EEeecccccEEEEEE-cCCeEEEee-cC-----CcEEEEECCccc
Q psy16373 118 CM--YSIQAHDGCIHALTY-SDSYVISLG-QD-----ERLCVWDRFQGH 157 (166)
Q Consensus 118 ~~--~~~~~~~~~v~~i~~-~~~~l~~~~-~d-----~~i~~wd~~~~~ 157 (166)
.. ..+...+.....+.. ....++.|+ .+ ..+.+||..+.+
T Consensus 277 W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 277 WIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred eeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 33 222222223333444 335666666 33 568999997765
No 258
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.50 E-value=0.017 Score=43.14 Aligned_cols=89 Identities=9% Similarity=-0.054 Sum_probs=57.5
Q ss_pred eEEEEEccc--ccc-eehhcCCCCceEEEEEcCCCCEEEEe-cCCCcEEEEeCcCCe------------eeEEeeccccc
Q psy16373 65 TLKVYKLED--QQL-LFTLHGHCGPITTLFIDGVSMMSGSG-SQDGLLCVWDTVTGA------------CMYSIQAHDGC 128 (166)
Q Consensus 65 ~v~v~~~~~--~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~-~~d~~v~~~d~~~~~------------~~~~~~~~~~~ 128 (166)
.|.+.|..+ ++. +..+.. .....++.++|+|++++.+ ..+.++.++|+.+.+ ....... ...
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~g 332 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLG 332 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSC
T ss_pred cEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-CCC
Confidence 366666665 322 223321 2345788999999876655 467899999998653 2333332 345
Q ss_pred EEEEEEcC-CeEEE-eecCCcEEEEECCc
Q psy16373 129 IHALTYSD-SYVIS-LGQDERLCVWDRFQ 155 (166)
Q Consensus 129 v~~i~~~~-~~l~~-~~~d~~i~~wd~~~ 155 (166)
...++|++ ..+++ .-.|+.|..||+.+
T Consensus 333 P~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 333 PLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred cceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 67899998 44444 44599999999987
No 259
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.49 E-value=0.2 Score=38.67 Aligned_cols=112 Identities=4% Similarity=-0.016 Sum_probs=74.3
Q ss_pred CCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehh--cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeE
Q psy16373 44 HQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTL--HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMY 120 (166)
Q Consensus 44 ~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~ 120 (166)
...|.++.. ....|..|+.++.+..++..+++..... ......|.++...+++...+.. . +-+..+|..+++...
T Consensus 406 ~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~ 483 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWIGT-H-AGVFVIDLASKKVIH 483 (781)
T ss_dssp CSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEEEE-T-TEEEEEESSSSSCCE
T ss_pred CcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEEEE-C-CceEEEeCCCCeEEe
Confidence 456888888 4566777887778999998766543221 1134578999888888766654 3 458889987665433
Q ss_pred Eeecc-----cccEEEEEEcC-CeEEEeecCCcEEEEECCccc
Q psy16373 121 SIQAH-----DGCIHALTYSD-SYVISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 121 ~~~~~-----~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~~ 157 (166)
..... ...|.++...+ +.|..++.++-|..||..+++
T Consensus 484 ~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~ 526 (781)
T 3v9f_A 484 HYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQL 526 (781)
T ss_dssp EECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCE
T ss_pred cccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCe
Confidence 22211 35688888876 577778775557788876543
No 260
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=96.39 E-value=0.2 Score=37.59 Aligned_cols=109 Identities=13% Similarity=-0.021 Sum_probs=72.5
Q ss_pred ceEEEEe----cCcEEEEEe------------------cCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEec
Q psy16373 46 PITVLEC----VSNRVITGS------------------QDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGS 103 (166)
Q Consensus 46 ~i~~~~~----~~~~l~~~~------------------~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 103 (166)
....+++ +++++++++ .++.+.+.|.++.+...++.--. ....++++|++.++.+.+
T Consensus 135 ~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~ 213 (595)
T 1fwx_A 135 GIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTS 213 (595)
T ss_dssp SEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEE
T ss_pred CCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEe
Confidence 3455554 677877774 35689999999888877766322 346677899988888777
Q ss_pred CCC--------------------------------------cEEEEeCcC--Cee-eEEeecccccEEEEEEcCC--eE-
Q psy16373 104 QDG--------------------------------------LLCVWDTVT--GAC-MYSIQAHDGCIHALTYSDS--YV- 139 (166)
Q Consensus 104 ~d~--------------------------------------~v~~~d~~~--~~~-~~~~~~~~~~v~~i~~~~~--~l- 139 (166)
.+. .|.+.|.++ ++. +..+.. ......+.++|+ ++
T Consensus 214 ~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~ 292 (595)
T 1fwx_A 214 YNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLC 292 (595)
T ss_dssp SCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEE
T ss_pred cCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEE
Confidence 553 366667666 433 344432 223456888884 44
Q ss_pred EEeecCCcEEEEECCcc
Q psy16373 140 ISLGQDERLCVWDRFQG 156 (166)
Q Consensus 140 ~~~~~d~~i~~wd~~~~ 156 (166)
++...+..|.++|+.+.
T Consensus 293 V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 293 VAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp EECTTSSBEEEEEGGGH
T ss_pred EeCCCCCeEEEEECccc
Confidence 44446889999999865
No 261
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.32 E-value=0.12 Score=34.42 Aligned_cols=114 Identities=15% Similarity=0.101 Sum_probs=74.9
Q ss_pred eeeccCCceEEEEe--cCcE-EEEEecCCeEEEEEcccccceehhcC-CCCceEEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373 39 STRAHHQPITVLEC--VSNR-VITGSQDHTLKVYKLEDQQLLFTLHG-HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV 114 (166)
Q Consensus 39 ~~~~~~~~i~~~~~--~~~~-l~~~~~d~~v~v~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~ 114 (166)
.+++-...+..+++ +++. +++...++.|...|.. ++.+..+.- -......+++.+++.++++.-.++.+.++++.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 44455567899999 3454 4557778899999998 777666532 22457888998888877776677888888876
Q ss_pred CCee---eEEee------cccccEEEEEEcC--CeEEEeecCCcEEEEEC
Q psy16373 115 TGAC---MYSIQ------AHDGCIHALTYSD--SYVISLGQDERLCVWDR 153 (166)
Q Consensus 115 ~~~~---~~~~~------~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~ 153 (166)
.... +.... ......-.++|+| +.|+++.+.....+|..
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEE
Confidence 4432 22221 1223457899998 47777776554455544
No 262
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.25 E-value=0.28 Score=37.93 Aligned_cols=111 Identities=10% Similarity=0.041 Sum_probs=74.5
Q ss_pred CCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhc-------CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC
Q psy16373 44 HQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLH-------GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT 115 (166)
Q Consensus 44 ~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 115 (166)
...|.++.. ....+..|+.++.+..||..+++...... .....|.++...+++...+.. .+ -+.++|..+
T Consensus 214 ~~~i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt-~~-Gl~~~~~~~ 291 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVATEGAGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGT-FN-DLNIYHEGT 291 (795)
T ss_dssp CCCEEEEEEEETTEEEEEEBSSCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEE-SS-CEEEEETTT
T ss_pred CCeeEEEEEcCCCCEEEEECCCCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEe-CC-hhheEcCCC
Confidence 456888887 55667777766668899987654322111 123569999998888877654 44 488899876
Q ss_pred CeeeEEeec-------ccccEEEEEEcC-CeEEEeecCCcEEEEECCcc
Q psy16373 116 GACMYSIQA-------HDGCIHALTYSD-SYVISLGQDERLCVWDRFQG 156 (166)
Q Consensus 116 ~~~~~~~~~-------~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~ 156 (166)
+........ ....|.++..++ +.|..|+.++-|..|+..++
T Consensus 292 ~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~ 340 (795)
T 4a2l_A 292 DSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRN 340 (795)
T ss_dssp TEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECGGGG
T ss_pred CeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCCCcc
Confidence 654322111 134688998887 68888888888999987554
No 263
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.23 E-value=0.15 Score=34.42 Aligned_cols=104 Identities=12% Similarity=0.107 Sum_probs=56.8
Q ss_pred ecCcEEEEEecC-------CeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCC-----CcEEEEeCcCCe
Q psy16373 52 CVSNRVITGSQD-------HTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQD-----GLLCVWDTVTGA 117 (166)
Q Consensus 52 ~~~~~l~~~~~d-------~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~~~d~~~~~ 117 (166)
.++..++.|+.+ ..+.+||+.+.+.. ..+.........+.+ ++..++.|+.+ ..+.+||+.+.+
T Consensus 154 ~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 154 VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 377777777642 45888998875432 222222222222222 46677777654 368899987664
Q ss_pred ee--EEeecccccEEEEEEcCCeEEEeecC-----CcEEEEECCccc
Q psy16373 118 CM--YSIQAHDGCIHALTYSDSYVISLGQD-----ERLCVWDRFQGH 157 (166)
Q Consensus 118 ~~--~~~~~~~~~v~~i~~~~~~l~~~~~d-----~~i~~wd~~~~~ 157 (166)
-. ..+.........+......++.|+.+ ..+.+||+.+.+
T Consensus 232 W~~~~~~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 232 WRQVADMNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EeeCCCCCCccccCeEEEECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 32 22221122223344444566666654 348999987654
No 264
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.07 E-value=0.35 Score=37.35 Aligned_cols=112 Identities=7% Similarity=0.003 Sum_probs=74.6
Q ss_pred CceEEEEe-cCcEEEEEecCCeEEEEEcccccceehh---cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeE
Q psy16373 45 QPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTL---HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMY 120 (166)
Q Consensus 45 ~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~ 120 (166)
..|.++.. ....|..|+.++.+..++..+++...-. ......|.++...+++...+ |+.++-+..+|.++++...
T Consensus 363 ~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~~ 441 (781)
T 3v9f_A 363 KVVSSVCDDGQGKLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQI 441 (781)
T ss_dssp SCEEEEEECTTSCEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEEE
T ss_pred cceEEEEEcCCCCEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEEE
Confidence 45888888 4466777887778999998765432211 12346789998888877665 5555668888887665332
Q ss_pred Eee--cccccEEEEEEcC-CeEEEeecCCcEEEEECCcccc
Q psy16373 121 SIQ--AHDGCIHALTYSD-SYVISLGQDERLCVWDRFQGHL 158 (166)
Q Consensus 121 ~~~--~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~~~ 158 (166)
... .....|.++...+ +.|..++. +.|..+|..+++.
T Consensus 442 ~~~~~~~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~~~ 481 (781)
T 3v9f_A 442 IELEKNELLDVRVFYEDKNKKIWIGTH-AGVFVIDLASKKV 481 (781)
T ss_dssp CCSTTTCCCCEEEEEECTTSEEEEEET-TEEEEEESSSSSC
T ss_pred eccCCCCCCeEEEEEECCCCCEEEEEC-CceEEEeCCCCeE
Confidence 111 1235788888876 57777776 5688899876543
No 265
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.81 E-value=0.22 Score=32.87 Aligned_cols=112 Identities=12% Similarity=-0.004 Sum_probs=66.7
Q ss_pred CceEEEEe--cCcEEEEE-ecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecC--CCcEEEEeCcCCee
Q psy16373 45 QPITVLEC--VSNRVITG-SQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQ--DGLLCVWDTVTGAC 118 (166)
Q Consensus 45 ~~i~~~~~--~~~~l~~~-~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~--d~~v~~~d~~~~~~ 118 (166)
.....+++ .+..|+.+ ...+.|.+++...................++++|+ +..+++... .+.|..+++... .
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~ 157 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-N 157 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-C
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-C
Confidence 35677888 34555544 45688999998643221111212245689999996 444555433 468888887533 2
Q ss_pred eEEee-cccccEEEEEEcC--CeEEEee-cCCcEEEEECCccc
Q psy16373 119 MYSIQ-AHDGCIHALTYSD--SYVISLG-QDERLCVWDRFQGH 157 (166)
Q Consensus 119 ~~~~~-~~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~~~~ 157 (166)
...+. ..-.....+++++ +.|+.+. ..+.|..+|.....
T Consensus 158 ~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~ 200 (267)
T 1npe_A 158 RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG 200 (267)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE
T ss_pred cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc
Confidence 22222 2223567899987 4565555 46789999986543
No 266
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.80 E-value=0.24 Score=33.32 Aligned_cols=104 Identities=10% Similarity=0.143 Sum_probs=55.9
Q ss_pred ecCcEEEEEecCC-----eEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCC-------CcEEEEeCcCCe
Q psy16373 52 CVSNRVITGSQDH-----TLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQD-------GLLCVWDTVTGA 117 (166)
Q Consensus 52 ~~~~~l~~~~~d~-----~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d-------~~v~~~d~~~~~ 117 (166)
+++..++.|+.++ .+.+||+.+.+.. ..+...........+ ++..++.|+.+ ..+..||+.+.+
T Consensus 107 ~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 107 LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNE 184 (302)
T ss_dssp ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTE
T ss_pred ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCc
Confidence 3777777777553 5778888765432 222211222222222 45666666543 358889987664
Q ss_pred ee--EEeecccccEEEEEEcCCeEEEeecC-----CcEEEEECCccc
Q psy16373 118 CM--YSIQAHDGCIHALTYSDSYVISLGQD-----ERLCVWDRFQGH 157 (166)
Q Consensus 118 ~~--~~~~~~~~~v~~i~~~~~~l~~~~~d-----~~i~~wd~~~~~ 157 (166)
-. ..+.........+.+....++.|+.+ ..+.+||+.+.+
T Consensus 185 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 185 WTYIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp EEEECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred EEECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 32 22222222333344444566666653 468899987654
No 267
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.72 E-value=0.32 Score=34.08 Aligned_cols=108 Identities=10% Similarity=0.182 Sum_probs=74.4
Q ss_pred EEEEEecCCeEEEEEcc-------cccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc-----CCeeeEEee
Q psy16373 56 RVITGSQDHTLKVYKLE-------DQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV-----TGACMYSIQ 123 (166)
Q Consensus 56 ~l~~~~~d~~v~v~~~~-------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~-----~~~~~~~~~ 123 (166)
+++....+|.+..|++. +.+.++++.. .+.+..+...+....+..+-++.-|..++.+ ++..+..+.
T Consensus 145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~ 223 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRAD 223 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBS
T ss_pred EEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEec
Confidence 57788888999999983 3455666663 4578888899887888888888777777754 234454442
Q ss_pred -c-ccccEEEEEE--cC---CeEEEee-cCCcEEEEECC-cccceeeeee
Q psy16373 124 -A-HDGCIHALTY--SD---SYVISLG-QDERLCVWDRF-QGHLLSTIQL 164 (166)
Q Consensus 124 -~-~~~~v~~i~~--~~---~~l~~~~-~d~~i~~wd~~-~~~~~~~~~~ 164 (166)
+ ....+..|+. .+ .+|++++ .++.+.+||.. +.+.+..|.+
T Consensus 224 ~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~I 273 (355)
T 3amr_A 224 GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFRI 273 (355)
T ss_dssp SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEEE
T ss_pred CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEEe
Confidence 1 1235666766 33 3666666 57799999996 6677777754
No 268
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.53 E-value=0.61 Score=36.03 Aligned_cols=107 Identities=12% Similarity=0.018 Sum_probs=62.6
Q ss_pred EEEe--cCcEEEEEecC-----CeEEEEEcccccce--ehhc-CCCCceEEEEEcCCCCEEEEecC---CCcEEEEeCcC
Q psy16373 49 VLEC--VSNRVITGSQD-----HTLKVYKLEDQQLL--FTLH-GHCGPITTLFIDGVSMMSGSGSQ---DGLLCVWDTVT 115 (166)
Q Consensus 49 ~~~~--~~~~l~~~~~d-----~~v~v~~~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~~~~~~~---d~~v~~~d~~~ 115 (166)
.+.| +++.|+....+ ..|.++++.++... ..+. ........+.++|++++++.... ...+.++|+.+
T Consensus 225 ~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 225 EIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp CCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred eEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 4667 67777766654 36788888765422 2222 22234567899999998876542 34688889876
Q ss_pred Ce-ee--EEe-ecccccEEEEEEcC-CeEEEe-ecC----CcEEEEECCc
Q psy16373 116 GA-CM--YSI-QAHDGCIHALTYSD-SYVISL-GQD----ERLCVWDRFQ 155 (166)
Q Consensus 116 ~~-~~--~~~-~~~~~~v~~i~~~~-~~l~~~-~~d----~~i~~wd~~~ 155 (166)
+. .. ..+ .........+.|+. +.|+.. ..+ ..|..+|+.+
T Consensus 305 ~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 305 GNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp CTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 52 12 333 22345566677554 444433 333 3577777764
No 269
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.40 E-value=0.35 Score=32.46 Aligned_cols=105 Identities=10% Similarity=0.085 Sum_probs=58.0
Q ss_pred ecCcEEEEEecC-----CeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCC-----CcEEEEeCcCCeee
Q psy16373 52 CVSNRVITGSQD-----HTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQD-----GLLCVWDTVTGACM 119 (166)
Q Consensus 52 ~~~~~l~~~~~d-----~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~~~d~~~~~~~ 119 (166)
.++..++.|+.+ ..+.+||+.+.+.. ..+.........+.+ ++..++.|+.+ ..+.+||+.+.+-.
T Consensus 158 ~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 158 ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEE
Confidence 377777777654 46888998765432 222211222222333 45677777654 46889998866432
Q ss_pred --EEeecccccEEEEEEcCCeEEEeecC-----CcEEEEECCcccc
Q psy16373 120 --YSIQAHDGCIHALTYSDSYVISLGQD-----ERLCVWDRFQGHL 158 (166)
Q Consensus 120 --~~~~~~~~~v~~i~~~~~~l~~~~~d-----~~i~~wd~~~~~~ 158 (166)
..+.........+.+....++.++.+ ..+.+||+.+.+.
T Consensus 236 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 236 TVTSMTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred ECCCCCCcccceeEEEECCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 22222222233344444566666654 4678899876543
No 270
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.33 E-value=0.47 Score=33.47 Aligned_cols=119 Identities=9% Similarity=-0.024 Sum_probs=69.7
Q ss_pred CceEEEEe--cCcEEEEEe-cC-CeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeee
Q psy16373 45 QPITVLEC--VSNRVITGS-QD-HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACM 119 (166)
Q Consensus 45 ~~i~~~~~--~~~~l~~~~-~d-~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~ 119 (166)
.....+++ .+..|+... .. +.|...+...................++++|+ +.++++-...+.|..+|+......
T Consensus 202 ~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~ 281 (386)
T 3v65_B 202 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK 281 (386)
T ss_dssp SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCE
T ss_pred CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeE
Confidence 34567777 344444443 34 67888877643222222222334689999976 555566566788999998643322
Q ss_pred EEeecccccEEEEEEcCCeEEEe-ecCCcEEEEECCcccceeeee
Q psy16373 120 YSIQAHDGCIHALTYSDSYVISL-GQDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 120 ~~~~~~~~~v~~i~~~~~~l~~~-~~d~~i~~wd~~~~~~~~~~~ 163 (166)
..+.........+++..+.++.+ ...+.|..+|..+++.+..+.
T Consensus 282 ~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 282 AVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp EEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEECCCCCceEEEEECCEEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 22222223445666666555444 456788888877777666654
No 271
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.12 E-value=0.45 Score=32.06 Aligned_cols=105 Identities=12% Similarity=0.069 Sum_probs=57.1
Q ss_pred EecCcEEEEEecC----CeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCC------CcEEEEeCcCCee
Q psy16373 51 ECVSNRVITGSQD----HTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQD------GLLCVWDTVTGAC 118 (166)
Q Consensus 51 ~~~~~~l~~~~~d----~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d------~~v~~~d~~~~~~ 118 (166)
..++..++.|+.+ ..+.+||..+.+.. ..+......-....+ ++..++.|+.+ ..+.+||+.+.+-
T Consensus 53 ~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W 130 (306)
T 3ii7_A 53 FWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESW 130 (306)
T ss_dssp EETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEE
T ss_pred EECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCce
Confidence 3477777777754 67888998876432 222221222222222 46677777654 4688899887643
Q ss_pred eE--EeecccccEEEEEEcCCeEEEeec---------CCcEEEEECCccc
Q psy16373 119 MY--SIQAHDGCIHALTYSDSYVISLGQ---------DERLCVWDRFQGH 157 (166)
Q Consensus 119 ~~--~~~~~~~~v~~i~~~~~~l~~~~~---------d~~i~~wd~~~~~ 157 (166)
.. .+.........+......++.|+. -..+.+||+.+.+
T Consensus 131 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~ 180 (306)
T 3ii7_A 131 HTKPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATET 180 (306)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTE
T ss_pred EeCCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCe
Confidence 22 222222222333444445555543 3458889887764
No 272
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.95 E-value=0.7 Score=33.39 Aligned_cols=106 Identities=10% Similarity=0.080 Sum_probs=68.8
Q ss_pred ceEEEEe--cCcEEEEEecCCeEEEEEcccccce------------ehhcC------CCCceEEEEEcCC---CCEEEEe
Q psy16373 46 PITVLEC--VSNRVITGSQDHTLKVYKLEDQQLL------------FTLHG------HCGPITTLFIDGV---SMMSGSG 102 (166)
Q Consensus 46 ~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~------------~~~~~------~~~~v~~~~~~~~---~~~~~~~ 102 (166)
.|..+.. +|++|+..+ +..|.|..+..+... +.+.- ...+|..+.|||- +..+++-
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 4666666 777877765 568899888732110 11111 2467999999997 5678888
Q ss_pred cCCCcEEEEeCcCC--eeeEEee---------cccccEEEEEEcCC----eEEEeecCCcEEEEEC
Q psy16373 103 SQDGLLCVWDTVTG--ACMYSIQ---------AHDGCIHALTYSDS----YVISLGQDERLCVWDR 153 (166)
Q Consensus 103 ~~d~~v~~~d~~~~--~~~~~~~---------~~~~~v~~i~~~~~----~l~~~~~d~~i~~wd~ 153 (166)
..|+.|++||+... ++. .+. .....|.+++|.++ ++++.+.+|.|+....
T Consensus 146 tsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlcP 210 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFYP 210 (452)
T ss_dssp ETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEESS
T ss_pred ecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEECC
Confidence 99999999999753 222 232 12256888999874 3444557777765543
No 273
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=94.91 E-value=0.24 Score=38.18 Aligned_cols=109 Identities=7% Similarity=-0.057 Sum_probs=64.0
Q ss_pred ceEEEEe---cCcEEEEEec-C----CeEEEEEcccc-cceehhcCCCCceEEEEEcCCCCEEEEecCC-----CcEEEE
Q psy16373 46 PITVLEC---VSNRVITGSQ-D----HTLKVYKLEDQ-QLLFTLHGHCGPITTLFIDGVSMMSGSGSQD-----GLLCVW 111 (166)
Q Consensus 46 ~i~~~~~---~~~~l~~~~~-d----~~v~v~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~~~ 111 (166)
.+...+| ++++|+.+.. + ..|+++|+.++ +.+... -......+.|+|+++.++....+ ..|..+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~--~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADK--VSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCC--EEEECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcc--ccCceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 4444555 5666664432 3 35999999988 632210 01123468899998877666554 257778
Q ss_pred eCcCCee--eEEee-cccccEEEEEEcCC--eEEEee---cCCcEEEEECCcc
Q psy16373 112 DTVTGAC--MYSIQ-AHDGCIHALTYSDS--YVISLG---QDERLCVWDRFQG 156 (166)
Q Consensus 112 d~~~~~~--~~~~~-~~~~~v~~i~~~~~--~l~~~~---~d~~i~~wd~~~~ 156 (166)
++.++.. ...+. ........+.|+|+ +|+... ....|.++|+.++
T Consensus 253 ~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 253 VMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp ETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred ECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 8876532 22222 22234567889984 444433 2456888898775
No 274
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=94.83 E-value=0.57 Score=31.83 Aligned_cols=109 Identities=13% Similarity=0.027 Sum_probs=68.9
Q ss_pred ceEEEEec--CcEEEEEecCCeEEEEEcccccc--eehh-cC-CCCceEEEEEcC-CCCEEEEecC--------------
Q psy16373 46 PITVLECV--SNRVITGSQDHTLKVYKLEDQQL--LFTL-HG-HCGPITTLFIDG-VSMMSGSGSQ-------------- 104 (166)
Q Consensus 46 ~i~~~~~~--~~~l~~~~~d~~v~v~~~~~~~~--~~~~-~~-~~~~v~~~~~~~-~~~~~~~~~~-------------- 104 (166)
....++++ +..|+.+...+.+..+|..+++. +... .+ .......+++.+ +++.+++...
T Consensus 81 ~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~ 160 (322)
T 2fp8_A 81 RTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDT 160 (322)
T ss_dssp CEEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHH
T ss_pred CCceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcc
Confidence 46788883 56777776666788888775532 1111 11 113468899999 8888776532
Q ss_pred ---CCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEe-ecCCcEEEEECCc
Q psy16373 105 ---DGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISL-GQDERLCVWDRFQ 155 (166)
Q Consensus 105 ---d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~-~~d~~i~~wd~~~ 155 (166)
++.+..+|..+++....... -.....++++++ .|+.+ ...+.|..|++..
T Consensus 161 ~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 161 SDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred cCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 36788888776654322221 123456889884 56555 4568899999874
No 275
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=94.80 E-value=0.58 Score=31.77 Aligned_cols=106 Identities=14% Similarity=-0.017 Sum_probs=65.3
Q ss_pred EEEEe--cCcEEEEE-ecCCeEEEEEcccccc--eehhcCCCCceEEEEEcCCCCEEEEecC----------CCcEEEEe
Q psy16373 48 TVLEC--VSNRVITG-SQDHTLKVYKLEDQQL--LFTLHGHCGPITTLFIDGVSMMSGSGSQ----------DGLLCVWD 112 (166)
Q Consensus 48 ~~~~~--~~~~l~~~-~~d~~v~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~----------d~~v~~~d 112 (166)
+.+++ +++.|+.+ ...+.|.++++..... ...+....+ ...+++.++|+++++... .+.|..+|
T Consensus 188 ~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d 266 (322)
T 2fp8_A 188 GGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFD 266 (322)
T ss_dssp CEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEEC
T ss_pred cceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEEC
Confidence 45677 55655555 4568999999874211 111111123 678999999988777654 45688888
Q ss_pred CcCCeeeEEeeccc----ccEEEEEEcCCeEEEee-cCCcEEEEECCc
Q psy16373 113 TVTGACMYSIQAHD----GCIHALTYSDSYVISLG-QDERLCVWDRFQ 155 (166)
Q Consensus 113 ~~~~~~~~~~~~~~----~~v~~i~~~~~~l~~~~-~d~~i~~wd~~~ 155 (166)
. .++.+..+.... ..++.+++..+.|+.++ ..+.|..+++..
T Consensus 267 ~-~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 267 E-FGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp T-TSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSSCSEEEEEEC--
T ss_pred C-CCCEEEEEECCCCCccccceEEEEeCCEEEEeecCCCceEEEeccc
Confidence 6 466666665432 24566666666555554 567898888754
No 276
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.68 E-value=0.61 Score=31.50 Aligned_cols=104 Identities=8% Similarity=0.033 Sum_probs=56.5
Q ss_pred ecCcEEEEEecC-----CeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCC-----CcEEEEeCcCCeee
Q psy16373 52 CVSNRVITGSQD-----HTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQD-----GLLCVWDTVTGACM 119 (166)
Q Consensus 52 ~~~~~l~~~~~d-----~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~~~d~~~~~~~ 119 (166)
.++..++.|+.+ ..+.+||..+.+.. ..+......-....+ ++..++.|+.+ ..+..||+.+.+-.
T Consensus 120 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 197 (308)
T 1zgk_A 120 IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWR 197 (308)
T ss_dssp ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEe
Confidence 377777777643 46788898765432 222211222222223 46677777654 45888998766432
Q ss_pred --EEeecccccEEEEEEcCCeEEEeecC-----CcEEEEECCccc
Q psy16373 120 --YSIQAHDGCIHALTYSDSYVISLGQD-----ERLCVWDRFQGH 157 (166)
Q Consensus 120 --~~~~~~~~~v~~i~~~~~~l~~~~~d-----~~i~~wd~~~~~ 157 (166)
..+.........+.+....++.|+.+ ..+.+||+.+.+
T Consensus 198 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 198 MITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp ECCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred eCCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 22222222233344444566666554 568899987654
No 277
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.64 E-value=0.28 Score=37.63 Aligned_cols=115 Identities=10% Similarity=-0.011 Sum_probs=63.5
Q ss_pred EEEEe--cCcEEEEEec--CCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeEEe
Q psy16373 48 TVLEC--VSNRVITGSQ--DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMYSI 122 (166)
Q Consensus 48 ~~~~~--~~~~l~~~~~--d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~~~ 122 (166)
..+++ .+..|+.+.. .+.|.+.++........+.......+.|+++|+ +.++++-...+.|..+++.... ...+
T Consensus 499 ~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-~~~~ 577 (699)
T 1n7d_A 499 RAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTI 577 (699)
T ss_dssp CCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-CEEE
T ss_pred ceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-eEEE
Confidence 45555 2344443332 266776666532211111112234578999987 5566666677889999986432 2222
Q ss_pred ec---ccccEEEEEEcCCe-EEEeecCCcEEEEECCcccceeeee
Q psy16373 123 QA---HDGCIHALTYSDSY-VISLGQDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 123 ~~---~~~~v~~i~~~~~~-l~~~~~d~~i~~wd~~~~~~~~~~~ 163 (166)
.. .-.....|++..+. +++....+.|..+|..+++.+..+.
T Consensus 578 ~~~~~~~~~P~glavd~~~lywtd~~~~~V~~~d~~~G~~~~~i~ 622 (699)
T 1n7d_A 578 LEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 622 (699)
T ss_dssp CCCSSSCSSCCCCEEETTEEEEECSTTTCEEEEETTTEEEEECCC
T ss_pred EecCCcCCCceEeEEECCEEEEEeCCCCeEEEEEccCCCceEEee
Confidence 21 11222345555654 4455556889999988887766554
No 278
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.58 E-value=0.63 Score=31.19 Aligned_cols=104 Identities=14% Similarity=0.132 Sum_probs=56.7
Q ss_pred ecCcEEEEEecC-----CeEEEEEccccc---c--eehhcCCCCceEEEEEcCCCCEEEEecCC-----CcEEEEeCcCC
Q psy16373 52 CVSNRVITGSQD-----HTLKVYKLEDQQ---L--LFTLHGHCGPITTLFIDGVSMMSGSGSQD-----GLLCVWDTVTG 116 (166)
Q Consensus 52 ~~~~~l~~~~~d-----~~v~v~~~~~~~---~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~~~d~~~~ 116 (166)
.++..++.|+.+ ..+.+||..+.+ . +..+......-....+ ++..++.|+.+ ..+.++|+.+.
T Consensus 61 ~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 61 LHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred ECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCC
Confidence 377777777754 468899988765 2 2222211222222222 46677777644 35888898765
Q ss_pred ee--eEEeecccccEEEEEEcCCeEEEeecC-----CcEEEEECCccc
Q psy16373 117 AC--MYSIQAHDGCIHALTYSDSYVISLGQD-----ERLCVWDRFQGH 157 (166)
Q Consensus 117 ~~--~~~~~~~~~~v~~i~~~~~~l~~~~~d-----~~i~~wd~~~~~ 157 (166)
+. +..+.........+.+....++.|+.+ ..+..||+.+.+
T Consensus 139 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~ 186 (301)
T 2vpj_A 139 QWSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGH 186 (301)
T ss_dssp EEEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTE
T ss_pred eEEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCc
Confidence 43 333322222233344444555666543 458888887654
No 279
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.36 E-value=0.61 Score=30.56 Aligned_cols=100 Identities=8% Similarity=-0.015 Sum_probs=58.5
Q ss_pred CceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCce--------EEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373 45 QPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPI--------TTLFIDGVSMMSGSGSQDGLLCVWDTV 114 (166)
Q Consensus 45 ~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v--------~~~~~~~~~~~~~~~~~d~~v~~~d~~ 114 (166)
..+..++| ++. |... .++.+.-.+..+.....-+.. ...| .++.|.|++.+.++ .||.|.-++..
T Consensus 41 ~~~~~laf~P~G~-LYaV-~~G~Ly~~~~~t~~~~~W~~s-~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSPGGE-LYGV-LNDKIYKGTPPTHDNDNWMGR-AKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECTTSC-EEEE-ETTEEEEESCCCSTTCCHHHH-CEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred ccceeEEECCCcc-EEEE-eCCeEEEECCCCCCccccccc-ccEecccccccceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 46778998 455 4444 777766666544222111111 1222 67889999999888 56988877753
Q ss_pred CCee---e--EEeec--ccccEEEEEEcC-CeEEEeecCCcEEE
Q psy16373 115 TGAC---M--YSIQA--HDGCIHALTYSD-SYVISLGQDERLCV 150 (166)
Q Consensus 115 ~~~~---~--~~~~~--~~~~v~~i~~~~-~~l~~~~~d~~i~~ 150 (166)
+... + ....+ -=..+..|.|.| ..|+... |+.++-
T Consensus 116 ~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr 158 (236)
T 1tl2_A 116 QSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYK 158 (236)
T ss_dssp CSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEE
T ss_pred cCCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEe
Confidence 3211 0 01111 113678899998 5777777 887543
No 280
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.32 E-value=0.81 Score=31.37 Aligned_cols=108 Identities=10% Similarity=0.002 Sum_probs=62.9
Q ss_pred CCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhc----CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee
Q psy16373 44 HQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLH----GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC 118 (166)
Q Consensus 44 ~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~ 118 (166)
...+..+.+ .+..++.++.+|.+.+.+...++.-..+. .....+.++.+.+++..++.+. ++.+ .+....++.
T Consensus 204 ~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~t 281 (327)
T 2xbg_A 204 SRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQT 281 (327)
T ss_dssp SSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSS
T ss_pred CCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcc
Confidence 456777877 33445566677887776433232222121 1223578898988777777654 6656 333333433
Q ss_pred eEEee---cccccEEEEEEc-CCeEEEeecCCcEEEEEC
Q psy16373 119 MYSIQ---AHDGCIHALTYS-DSYVISLGQDERLCVWDR 153 (166)
Q Consensus 119 ~~~~~---~~~~~v~~i~~~-~~~l~~~~~d~~i~~wd~ 153 (166)
-..+. .....+.++.|. ++.++.++.+|.|.-++-
T Consensus 282 W~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 282 WQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILLRYVT 320 (327)
T ss_dssp CEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEEEECC
T ss_pred cEEcCccCCCCCCeEEEEEECCCceEEEcCCceEEEEcC
Confidence 23232 123456778885 467888888998776653
No 281
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=94.31 E-value=0.86 Score=31.62 Aligned_cols=107 Identities=9% Similarity=-0.070 Sum_probs=64.5
Q ss_pred EEEEe---cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCC-CcEEEEeCcCCeeeEEe
Q psy16373 48 TVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQD-GLLCVWDTVTGACMYSI 122 (166)
Q Consensus 48 ~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d-~~v~~~d~~~~~~~~~~ 122 (166)
..+++ .+.+.++-...+.|.+.+.........+.........++++|. +.++.+-... +.|...++.... ...+
T Consensus 119 ~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~ 197 (349)
T 3v64_C 119 GGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRII 197 (349)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEES
T ss_pred cEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEE
Confidence 45555 3445555556788999988754322222233355789999986 5555555555 788888875432 2222
Q ss_pred -ecccccEEEEEEcC--CeEEEee-cCCcEEEEECCc
Q psy16373 123 -QAHDGCIHALTYSD--SYVISLG-QDERLCVWDRFQ 155 (166)
Q Consensus 123 -~~~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~~ 155 (166)
...-...+.+++++ +.|+.+. ..+.|..+|+..
T Consensus 198 ~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 198 ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp CCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC
Confidence 22223467899986 4555554 456788888753
No 282
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=94.19 E-value=1.1 Score=32.22 Aligned_cols=109 Identities=7% Similarity=0.006 Sum_probs=64.7
Q ss_pred CCceEEEEe--cCcEEEEEecC----C-eEEEEEcccccce--ehhcCCCCceEEEEEcC-CCCEEEEecCCCcEEEEeC
Q psy16373 44 HQPITVLEC--VSNRVITGSQD----H-TLKVYKLEDQQLL--FTLHGHCGPITTLFIDG-VSMMSGSGSQDGLLCVWDT 113 (166)
Q Consensus 44 ~~~i~~~~~--~~~~l~~~~~d----~-~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~v~~~d~ 113 (166)
......+++ +++.|+.+... . .+.+.+. .+... ..+. .......++++| ++..+++-..++.|..++.
T Consensus 178 ~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~ 255 (430)
T 3tc9_A 178 LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDF 255 (430)
T ss_dssp CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEET
T ss_pred CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEEC
Confidence 345677888 67756655541 1 3333343 33222 1222 123457788999 6887877777889999998
Q ss_pred cCCeeeEEeec-ccccEEEEEEcC--CeEEEee-cCCcEEEEECC
Q psy16373 114 VTGACMYSIQA-HDGCIHALTYSD--SYVISLG-QDERLCVWDRF 154 (166)
Q Consensus 114 ~~~~~~~~~~~-~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~ 154 (166)
..+........ .......++|+| ++|+.+. ..+.|..++..
T Consensus 256 ~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 256 TTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp TTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 76654222221 123457899998 4455554 56788887754
No 283
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=93.93 E-value=1 Score=31.20 Aligned_cols=119 Identities=9% Similarity=-0.033 Sum_probs=69.5
Q ss_pred CceEEEEec--CcEEEEE-ecC-CeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeee
Q psy16373 45 QPITVLECV--SNRVITG-SQD-HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACM 119 (166)
Q Consensus 45 ~~i~~~~~~--~~~l~~~-~~d-~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~ 119 (166)
.....++++ +..|+.. ... +.|...+.................+.++++|+ +.++++-...+.|..+|+......
T Consensus 159 ~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~ 238 (349)
T 3v64_C 159 EKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRK 238 (349)
T ss_dssp SCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceE
Confidence 345677772 4444443 344 77888887643222222222345689999976 555555566778999998643322
Q ss_pred EEeecccccEEEEEEcCCeEEEee-cCCcEEEEECCcccceeeee
Q psy16373 120 YSIQAHDGCIHALTYSDSYVISLG-QDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 120 ~~~~~~~~~v~~i~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~ 163 (166)
..+...-.....+++..+.++.+. ..+.|..+|..+|+.+..+.
T Consensus 239 ~~~~~~~~~P~giav~~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 239 AVISQGLPHPFAITVFEDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp EEECSSCSSEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEeCCCCCceEEEEECCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 222222233456666666555554 56778888876777666554
No 284
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=93.70 E-value=1.2 Score=31.30 Aligned_cols=110 Identities=8% Similarity=-0.091 Sum_probs=65.7
Q ss_pred CceEEEEe--cCcE-EEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeE
Q psy16373 45 QPITVLEC--VSNR-VITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMY 120 (166)
Q Consensus 45 ~~i~~~~~--~~~~-l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~ 120 (166)
.....++| .++. +++-...+.|..++.........+.........+++++. +..+++-...+.|.+.++.......
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~ 195 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 195 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence 34677888 3344 445456788999998765433222222334567888875 5566666667788888876443222
Q ss_pred EeecccccEEEEEEcC--CeEEEeec-C-CcEEEEECC
Q psy16373 121 SIQAHDGCIHALTYSD--SYVISLGQ-D-ERLCVWDRF 154 (166)
Q Consensus 121 ~~~~~~~~v~~i~~~~--~~l~~~~~-d-~~i~~wd~~ 154 (166)
.+...-.....++++| ..|+.+.. . +.|...++.
T Consensus 196 l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 196 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 2322224567888886 45555443 3 567777764
No 285
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.52 E-value=1.1 Score=30.20 Aligned_cols=105 Identities=10% Similarity=0.076 Sum_probs=57.7
Q ss_pred ecCcEEEEEecC-----CeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCC-----CcEEEEeCcCCeee
Q psy16373 52 CVSNRVITGSQD-----HTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQD-----GLLCVWDTVTGACM 119 (166)
Q Consensus 52 ~~~~~l~~~~~d-----~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~~~d~~~~~~~ 119 (166)
+++..++.|+.+ ..+.+||+.+.+.. ..+.........+.+ ++..++.|+.+ ..+.+||+.+.+-.
T Consensus 167 ~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 167 LNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWT 244 (308)
T ss_dssp ETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred ECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEE
Confidence 377777777654 45888998765432 222211222223333 56677777654 46889998766432
Q ss_pred --EEeecccccEEEEEEcCCeEEEeecC-----CcEEEEECCcccc
Q psy16373 120 --YSIQAHDGCIHALTYSDSYVISLGQD-----ERLCVWDRFQGHL 158 (166)
Q Consensus 120 --~~~~~~~~~v~~i~~~~~~l~~~~~d-----~~i~~wd~~~~~~ 158 (166)
..+.........+......++.|+.+ ..+.+||+.+.+-
T Consensus 245 ~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 245 FVAPMKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp ECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred ECCCCCCCccceEEEEECCEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence 22222222233344444566666643 4678899877543
No 286
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=93.49 E-value=1.2 Score=30.50 Aligned_cols=118 Identities=8% Similarity=0.001 Sum_probs=69.8
Q ss_pred CceEEEEe--cCcEEEEEe--cCCeEEEEEcccccceehh-cCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCee
Q psy16373 45 QPITVLEC--VSNRVITGS--QDHTLKVYKLEDQQLLFTL-HGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGAC 118 (166)
Q Consensus 45 ~~i~~~~~--~~~~l~~~~--~d~~v~v~~~~~~~~~~~~-~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~ 118 (166)
.....+++ .+..|+.+. ..+.|...+..... ...+ ...-...+.++++++ +..+++-...+.|..+|+.....
T Consensus 122 ~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~ 200 (318)
T 3sov_A 122 DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR 200 (318)
T ss_dssp SSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce
Confidence 34567777 344555544 35778888776322 2222 222344689999986 55555556678999999864322
Q ss_pred eEEeecccccEEEEEEcCCeE-EEeecCCcEEEEECCcccceeeee
Q psy16373 119 MYSIQAHDGCIHALTYSDSYV-ISLGQDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 119 ~~~~~~~~~~v~~i~~~~~~l-~~~~~d~~i~~wd~~~~~~~~~~~ 163 (166)
.............+++..+.+ ++-...+.|..+|..+|+.+..+.
T Consensus 201 ~~~~~~~~~~P~glav~~~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 201 QAVVKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp EEEECSCCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EEEecCCCCCceEEEEeCCEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 222222223445666666544 444456789999988887766554
No 287
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.29 E-value=1.2 Score=30.05 Aligned_cols=105 Identities=5% Similarity=0.005 Sum_probs=56.8
Q ss_pred ecCcEEEEEec------CCeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCCC-----cEEEEeCcCCee
Q psy16373 52 CVSNRVITGSQ------DHTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQDG-----LLCVWDTVTGAC 118 (166)
Q Consensus 52 ~~~~~l~~~~~------d~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d~-----~v~~~d~~~~~~ 118 (166)
.++..++.|+. -..+.+||..+.+-. ..+......-....+ ++..++.|+.++ .+.+||+.+.+-
T Consensus 147 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 147 HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 47777777775 246888998875432 222211212222223 456777776544 577889876643
Q ss_pred e--EEeecccccEEEEEEcCCeEEEeecC--------------CcEEEEECCcccc
Q psy16373 119 M--YSIQAHDGCIHALTYSDSYVISLGQD--------------ERLCVWDRFQGHL 158 (166)
Q Consensus 119 ~--~~~~~~~~~v~~i~~~~~~l~~~~~d--------------~~i~~wd~~~~~~ 158 (166)
. ..+.........+.+....++.|+.+ ..+.+||+.+.+-
T Consensus 225 ~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 280 (315)
T 4asc_A 225 APFEAFPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKW 280 (315)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred EECCCCCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChh
Confidence 2 22222222333444455566666653 2477888876643
No 288
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=93.14 E-value=0.19 Score=38.61 Aligned_cols=37 Identities=24% Similarity=0.450 Sum_probs=31.8
Q ss_pred cEEEEEEcCCeEEEeecCCcEEEEECCcccceeeeee
Q psy16373 128 CIHALTYSDSYVISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 128 ~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
.|.++.+...++++-+.|+++|+||+++++++.+..+
T Consensus 223 ~Is~~~~~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLFHERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEETTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEeccCCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4666677778999999999999999999999887765
No 289
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.10 E-value=1.3 Score=29.74 Aligned_cols=105 Identities=10% Similarity=0.054 Sum_probs=56.0
Q ss_pred EecCcEEEEEecC------CeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecC---------CCcEEEEeC
Q psy16373 51 ECVSNRVITGSQD------HTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQ---------DGLLCVWDT 113 (166)
Q Consensus 51 ~~~~~~l~~~~~d------~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~---------d~~v~~~d~ 113 (166)
..++..++.|+.+ ..+.+||..+.+.. ..+......-..+.+ ++..++.|+. -..+.+||+
T Consensus 99 ~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~ 176 (306)
T 3ii7_A 99 AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDP 176 (306)
T ss_dssp EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEET
T ss_pred EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCC
Confidence 3377777777765 46888998876432 222211111222222 4566666653 345888998
Q ss_pred cCCee--eEEeecccccEEEEEEcCCeEEEeecC-----CcEEEEECCccc
Q psy16373 114 VTGAC--MYSIQAHDGCIHALTYSDSYVISLGQD-----ERLCVWDRFQGH 157 (166)
Q Consensus 114 ~~~~~--~~~~~~~~~~v~~i~~~~~~l~~~~~d-----~~i~~wd~~~~~ 157 (166)
.+.+- +..+.........+......++.|+.+ ..+.+||+.+.+
T Consensus 177 ~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 177 ATETWTELCPMIEARKNHGLVFVKDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp TTTEEEEECCCSSCCBSCEEEEETTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred CCCeEEECCCccchhhcceEEEECCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 76643 222222222233344444555555543 458888887654
No 290
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.08 E-value=0.64 Score=35.67 Aligned_cols=102 Identities=13% Similarity=-0.020 Sum_probs=57.1
Q ss_pred cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCC-CcEEEEeCcCCeeeEEee-cccccE
Q psy16373 53 VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQD-GLLCVWDTVTGACMYSIQ-AHDGCI 129 (166)
Q Consensus 53 ~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d-~~v~~~d~~~~~~~~~~~-~~~~~v 129 (166)
.++++++-...+.|.+.++........+.........++++|. +.++++-... +.|...++.... ...+. ..-...
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~~P 542 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWP 542 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCSSC
T ss_pred CCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCCCc
Confidence 3445555556788999988754332222222344578889886 4444443222 677777764322 22221 112234
Q ss_pred EEEEEcC--CeEEEee-cCCcEEEEECCc
Q psy16373 130 HALTYSD--SYVISLG-QDERLCVWDRFQ 155 (166)
Q Consensus 130 ~~i~~~~--~~l~~~~-~d~~i~~wd~~~ 155 (166)
+.|+|++ +.|+.+. ..+.|..+++..
T Consensus 543 nGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 543 NGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp CCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred cEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 5788886 3555444 456788888753
No 291
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=92.59 E-value=1.8 Score=30.07 Aligned_cols=93 Identities=8% Similarity=0.070 Sum_probs=63.6
Q ss_pred CCeEEEEEcc---cccceehhc--C-----------CCCceEEEEEcCCCCEEEEecCC-CcEEEEeCcCCeeeEEee--
Q psy16373 63 DHTLKVYKLE---DQQLLFTLH--G-----------HCGPITTLFIDGVSMMSGSGSQD-GLLCVWDTVTGACMYSIQ-- 123 (166)
Q Consensus 63 d~~v~v~~~~---~~~~~~~~~--~-----------~~~~v~~~~~~~~~~~~~~~~~d-~~v~~~d~~~~~~~~~~~-- 123 (166)
+..|..+|+. +++.+.... . -......++..++|+..++++.. +.|...+.... .+..+.
T Consensus 99 ~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~~~~~~ 177 (334)
T 2p9w_A 99 ASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVSTFAWE 177 (334)
T ss_dssp CCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEEEEEEC
T ss_pred CCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEeeeeec
Confidence 6789999998 776653322 1 11247899999999999998888 88877776433 333221
Q ss_pred c----ccccEEEEEEcC--CeEEEeecCCcEEEEECCcc
Q psy16373 124 A----HDGCIHALTYSD--SYVISLGQDERLCVWDRFQG 156 (166)
Q Consensus 124 ~----~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~ 156 (166)
. .....+.|+++| ..|++...++.|..+|+++.
T Consensus 178 ~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 178 SGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp CCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 1 112356899997 36666656999999998743
No 292
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=92.33 E-value=1.7 Score=29.25 Aligned_cols=71 Identities=10% Similarity=0.107 Sum_probs=39.4
Q ss_pred ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC-CeEEEeec--CC-cEEEEECCcccc
Q psy16373 86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD-SYVISLGQ--DE-RLCVWDRFQGHL 158 (166)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~~l~~~~~--d~-~i~~wd~~~~~~ 158 (166)
....++++++++.+++...++.|..+|.... ....+. .......+++.+ +.++.+.. ++ .|..+|..+++.
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 4567777777776666666777777776543 222222 233566777776 33444442 22 355566555543
No 293
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=92.27 E-value=2 Score=29.85 Aligned_cols=109 Identities=6% Similarity=0.017 Sum_probs=69.0
Q ss_pred CceEEEEec--CcEEEEEe-cCCeEEEEEccccccee-hhcC----C--CCceEEEEE---cCCCCEEEEec--------
Q psy16373 45 QPITVLECV--SNRVITGS-QDHTLKVYKLEDQQLLF-TLHG----H--CGPITTLFI---DGVSMMSGSGS-------- 103 (166)
Q Consensus 45 ~~i~~~~~~--~~~l~~~~-~d~~v~v~~~~~~~~~~-~~~~----~--~~~v~~~~~---~~~~~~~~~~~-------- 103 (166)
-.-.++.|+ ...++.++ ..++|..|+...+.... .+.. . ...+..+.+ .|+++++++..
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 334577883 45555555 78999999997553222 2221 1 113578999 68877777543
Q ss_pred -----CCCcEEEEeCc---CCeeeEEee--ccc-----------ccEEEEEEcC--CeEEEeecC-CcEEEEEC
Q psy16373 104 -----QDGLLCVWDTV---TGACMYSIQ--AHD-----------GCIHALTYSD--SYVISLGQD-ERLCVWDR 153 (166)
Q Consensus 104 -----~d~~v~~~d~~---~~~~~~~~~--~~~-----------~~v~~i~~~~--~~l~~~~~d-~~i~~wd~ 153 (166)
.+..+..+|+. +++.+.... ... .....++..+ +..++.+.. +.|...+.
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeC
Confidence 25779999998 777665543 111 2477888887 466667666 66655554
No 294
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=92.24 E-value=3.4 Score=32.37 Aligned_cols=109 Identities=10% Similarity=-0.069 Sum_probs=65.4
Q ss_pred eEEEEe--cC-cEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCC-CcEEEEeCcCCeeeEE
Q psy16373 47 ITVLEC--VS-NRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQD-GLLCVWDTVTGACMYS 121 (166)
Q Consensus 47 i~~~~~--~~-~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d-~~v~~~d~~~~~~~~~ 121 (166)
...|++ .+ +++++-...+.|.+.++........+.........|+++|. +.++++-... +.|...++........
T Consensus 473 P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~l 552 (791)
T 3m0c_C 473 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL 552 (791)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE
T ss_pred cceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEE
Confidence 445555 34 55555566789999998754332222233445789999987 5555554333 6788888864433222
Q ss_pred eecccccEEEEEEcC--CeEEEeec-CCcEEEEECCc
Q psy16373 122 IQAHDGCIHALTYSD--SYVISLGQ-DERLCVWDRFQ 155 (166)
Q Consensus 122 ~~~~~~~v~~i~~~~--~~l~~~~~-d~~i~~wd~~~ 155 (166)
+...-.....|++++ +.|+.+.. .+.|...++..
T Consensus 553 v~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG 589 (791)
T 3m0c_C 553 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 589 (791)
T ss_dssp ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 332224567888885 56666643 46788888743
No 295
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=92.21 E-value=4.1 Score=33.37 Aligned_cols=108 Identities=15% Similarity=0.120 Sum_probs=68.3
Q ss_pred CceEEEEecCcEEEEEecCCeEEEEEcccccceeh-hcCCCCceEEEEEcCC------CCEEEEecC-CCcEEEEeCcCC
Q psy16373 45 QPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFT-LHGHCGPITTLFIDGV------SMMSGSGSQ-DGLLCVWDTVTG 116 (166)
Q Consensus 45 ~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~-~~~~~~~v~~~~~~~~------~~~~~~~~~-d~~v~~~d~~~~ 116 (166)
..|...+.++.+++.++ ++.+.++.+.+++.... -..-...|.|+++.|. ..+++.|.. |++++++++.+.
T Consensus 514 ~~I~~As~n~~~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l 592 (1158)
T 3ei3_A 514 KNISVASCNSSQVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSF 592 (1158)
T ss_dssp CCCCEEEECSSEEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTC
T ss_pred CEEEEEEeCCCEEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCC
Confidence 35766677566666664 67888888765432111 0123467999998763 468888886 999999999877
Q ss_pred eeeEEeecc-cccEEEEE---EcC-CeEEEeecCCcEEEEEC
Q psy16373 117 ACMYSIQAH-DGCIHALT---YSD-SYVISLGQDERLCVWDR 153 (166)
Q Consensus 117 ~~~~~~~~~-~~~v~~i~---~~~-~~l~~~~~d~~i~~wd~ 153 (166)
+.+....-. .....++. +.. .++..+-.||.+.-+.+
T Consensus 593 ~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~ 634 (1158)
T 3ei3_A 593 ELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGL 634 (1158)
T ss_dssp CEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEE
T ss_pred CeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEE
Confidence 665443211 12233333 323 47888888998755544
No 296
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=92.16 E-value=2.4 Score=30.42 Aligned_cols=107 Identities=6% Similarity=-0.026 Sum_probs=61.1
Q ss_pred EEEEec---CcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecC-CC----cEEEEeCcCCeee
Q psy16373 48 TVLECV---SNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQ-DG----LLCVWDTVTGACM 119 (166)
Q Consensus 48 ~~~~~~---~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~-d~----~v~~~d~~~~~~~ 119 (166)
..++++ +..|+.+...+.|+.+|+..++... +.........++++++++.+..+.. ++ .+...+. .+...
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~-~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~ 217 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVST-VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFK 217 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEE-EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSC
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEE-EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCcee
Confidence 456664 3556666655888889987654432 2224456789999999985544443 22 2333443 22211
Q ss_pred --EEeecccccEEEEEEcC--CeEEEee-cCCcEEEEECCccc
Q psy16373 120 --YSIQAHDGCIHALTYSD--SYVISLG-QDERLCVWDRFQGH 157 (166)
Q Consensus 120 --~~~~~~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~~~~ 157 (166)
..+.. ......++++| ..|+.+. .++.|..++...+.
T Consensus 218 ~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~ 259 (430)
T 3tc9_A 218 VITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE 259 (430)
T ss_dssp SEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE
T ss_pred eeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc
Confidence 22221 12345677777 3555544 56788888887554
No 297
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.81 E-value=3.2 Score=33.21 Aligned_cols=37 Identities=24% Similarity=0.152 Sum_probs=31.8
Q ss_pred ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe
Q psy16373 86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI 122 (166)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~ 122 (166)
.+.+++..++..++.+-+.|+++++|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 4677777888889999999999999999999887765
No 298
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=91.70 E-value=2.1 Score=28.93 Aligned_cols=105 Identities=9% Similarity=0.046 Sum_probs=55.3
Q ss_pred ecCcEEEEEec------CCeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCC-----CcEEEEeCcCCee
Q psy16373 52 CVSNRVITGSQ------DHTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQD-----GLLCVWDTVTGAC 118 (166)
Q Consensus 52 ~~~~~l~~~~~------d~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d-----~~v~~~d~~~~~~ 118 (166)
.++..++.|+. ...+.+||..+.+-. ..+...........+ ++..++.|+.+ ..+.+||+.+.+-
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 234 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNKW 234 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCCE
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCeE
Confidence 36777777764 245889998876432 222211111222222 45666666543 2466888876532
Q ss_pred --eEEeecccccEEEEEEcCCeEEEeecC--------------CcEEEEECCcccc
Q psy16373 119 --MYSIQAHDGCIHALTYSDSYVISLGQD--------------ERLCVWDRFQGHL 158 (166)
Q Consensus 119 --~~~~~~~~~~v~~i~~~~~~l~~~~~d--------------~~i~~wd~~~~~~ 158 (166)
+..+.........+.+....++.|+.+ ..+.+||+.+.+-
T Consensus 235 ~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 290 (318)
T 2woz_A 235 EVMTEFPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEW 290 (318)
T ss_dssp EECCCCSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEE
T ss_pred EECCCCCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEe
Confidence 222222222333344444566666543 4578889877554
No 299
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.60 E-value=4.4 Score=32.41 Aligned_cols=37 Identities=24% Similarity=0.333 Sum_probs=30.0
Q ss_pred cEEEEEEcC--CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373 128 CIHALTYSD--SYVISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 128 ~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
.+.+++..+ .++++.+.|+++|+|++.+++++.+..+
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 345555555 4899999999999999999999887654
No 300
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=91.19 E-value=2.9 Score=29.59 Aligned_cols=111 Identities=13% Similarity=0.033 Sum_probs=66.6
Q ss_pred CCceEEEEe--cCcEEE-EEecCCeEEEEEccccc----ceehhcCCCCceEEEEEcC-CCCEEEEecCCCcEEEEeCcC
Q psy16373 44 HQPITVLEC--VSNRVI-TGSQDHTLKVYKLEDQQ----LLFTLHGHCGPITTLFIDG-VSMMSGSGSQDGLLCVWDTVT 115 (166)
Q Consensus 44 ~~~i~~~~~--~~~~l~-~~~~d~~v~v~~~~~~~----~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~d~~v~~~d~~~ 115 (166)
...+..++| .++.|+ +-...+.|..+++.... ....+.........+++.+ .++.+++-...+.|.+.++..
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 445778888 344444 44456888888886521 2222222334578899987 466666767788999999875
Q ss_pred CeeeEEeecccccEEEEEEcC--CeEEEeec--CCcEEEEECC
Q psy16373 116 GACMYSIQAHDGCIHALTYSD--SYVISLGQ--DERLCVWDRF 154 (166)
Q Consensus 116 ~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~--d~~i~~wd~~ 154 (166)
......+...-.....|+++| +.|+.... .+.|...++.
T Consensus 191 ~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 191 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 543333332234467888887 45555542 3667777764
No 301
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=90.93 E-value=2.4 Score=28.17 Aligned_cols=110 Identities=8% Similarity=0.055 Sum_probs=69.3
Q ss_pred cCCceEEEEe--cCcEEEEEecCCeEEEEEccc---ccceehh-------cCCCCceEEEEEcCC-CCEEEEecCCCcEE
Q psy16373 43 HHQPITVLEC--VSNRVITGSQDHTLKVYKLED---QQLLFTL-------HGHCGPITTLFIDGV-SMMSGSGSQDGLLC 109 (166)
Q Consensus 43 ~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~---~~~~~~~-------~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~ 109 (166)
.......+++ .++.|+++.......+|.+.. ...+..+ ..+.....+++++|. +.+++....++.+.
T Consensus 119 ~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~ 198 (255)
T 3qqz_A 119 TNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQ 198 (255)
T ss_dssp CSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred ccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEE
Confidence 3455789999 555777777665556666541 1111111 113345789999998 66777777888999
Q ss_pred EEeCcCCeeeEEeeccc---------ccEEEEEEcC-CeEEEeecCCcEEEEEC
Q psy16373 110 VWDTVTGACMYSIQAHD---------GCIHALTYSD-SYVISLGQDERLCVWDR 153 (166)
Q Consensus 110 ~~d~~~~~~~~~~~~~~---------~~v~~i~~~~-~~l~~~~~d~~i~~wd~ 153 (166)
.+|.. ++.+..+.-.. ..--.|+|.+ ..|+..++.+.++.+.-
T Consensus 199 ~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvsE~n~~y~f~~ 251 (255)
T 3qqz_A 199 EVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVSEPNRFYRFTP 251 (255)
T ss_dssp EECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEETTTEEEEEEC
T ss_pred EEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEcCCceEEEEEe
Confidence 99965 55555543221 1446789988 46777788877776653
No 302
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=90.91 E-value=4.1 Score=30.83 Aligned_cols=65 Identities=11% Similarity=0.055 Sum_probs=43.0
Q ss_pred cCcEEEEEe-cCCeEEEEEccccccee--hhcCCCCceEEEEEcCCCCEEEEec-CC-----CcEEEEeCcCCee
Q psy16373 53 VSNRVITGS-QDHTLKVYKLEDQQLLF--TLHGHCGPITTLFIDGVSMMSGSGS-QD-----GLLCVWDTVTGAC 118 (166)
Q Consensus 53 ~~~~l~~~~-~d~~v~v~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~-~d-----~~v~~~d~~~~~~ 118 (166)
++..++.|+ .+..+.+||..+.+... .+..... -.+.+..++++.++.|+ .+ ..+.+||..+.+.
T Consensus 253 ~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 253 NGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp TSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred CCCEEEeCCCCCCceEEecCcCCceeECCCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence 788888887 45689999998764332 2221111 13455567888888888 34 4689999987653
No 303
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=90.80 E-value=3.1 Score=29.15 Aligned_cols=121 Identities=11% Similarity=0.139 Sum_probs=76.2
Q ss_pred eeeeccCCceEEEEecCc-----EEEEEec---CCeEEEEEcccc---ccee-----h--hc--CCCCceEEEEEcCCCC
Q psy16373 38 ESTRAHHQPITVLECVSN-----RVITGSQ---DHTLKVYKLEDQ---QLLF-----T--LH--GHCGPITTLFIDGVSM 97 (166)
Q Consensus 38 ~~~~~~~~~i~~~~~~~~-----~l~~~~~---d~~v~v~~~~~~---~~~~-----~--~~--~~~~~v~~~~~~~~~~ 97 (166)
+.+++|.+....+..+++ +++.+.. .+.+++.++... .+.. . +. ...+..-++.+++...
T Consensus 193 Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kyg 272 (365)
T 2xzh_A 193 QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD 272 (365)
T ss_dssp EEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTT
T ss_pred ceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCC
Confidence 345566655555555222 3444433 268888888432 1111 0 11 1234556788888777
Q ss_pred EEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccc
Q psy16373 98 MSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHL 158 (166)
Q Consensus 98 ~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~ 158 (166)
.+..-+.-|.+.+||++++.++..-+-..++|..-+-++ .-++.....|.|.--.+.....
T Consensus 273 viyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~~~i 335 (365)
T 2xzh_A 273 VVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 335 (365)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECTTTH
T ss_pred EEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECcccE
Confidence 777778999999999999999987766666775555443 5677777788776666655443
No 304
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=90.68 E-value=2.8 Score=28.50 Aligned_cols=108 Identities=13% Similarity=0.009 Sum_probs=64.1
Q ss_pred eEEEEe--cC-cEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCC-CcEEEEeCcCCeeeEE
Q psy16373 47 ITVLEC--VS-NRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQD-GLLCVWDTVTGACMYS 121 (166)
Q Consensus 47 i~~~~~--~~-~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d-~~v~~~d~~~~~~~~~ 121 (166)
...+++ .+ ++.++-...+.|.+.+.........+.........++++|. +..+++.... +.|...++. +.....
T Consensus 79 p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~ 157 (316)
T 1ijq_A 79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYS 157 (316)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEE
T ss_pred cCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEE
Confidence 355665 34 44455556789999998744322222223346789999986 4444554333 678888875 333333
Q ss_pred ee-cccccEEEEEEcC--CeEEEee-cCCcEEEEECCc
Q psy16373 122 IQ-AHDGCIHALTYSD--SYVISLG-QDERLCVWDRFQ 155 (166)
Q Consensus 122 ~~-~~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~~ 155 (166)
+. ..-...+.+++++ +.|+.+. ..+.|..+|...
T Consensus 158 ~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 158 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 32 2223567899986 4665555 456899998853
No 305
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=90.40 E-value=2.9 Score=28.15 Aligned_cols=110 Identities=8% Similarity=0.012 Sum_probs=65.3
Q ss_pred CceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC--CcEEEEeCcCCeeeE
Q psy16373 45 QPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD--GLLCVWDTVTGACMY 120 (166)
Q Consensus 45 ~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d--~~v~~~d~~~~~~~~ 120 (166)
.....+++ +++++++-..++.|..+|.... ....+. .......+++.++++.+++.... ..+..+|..+++...
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGN-QQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCC-EEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCc-eEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 34667888 5665556557899999988753 222222 23468899999999877665432 246677777776432
Q ss_pred Eeec-ccccEEEEEEcC-CeEEEee-cCCcEEEEECCcc
Q psy16373 121 SIQA-HDGCIHALTYSD-SYVISLG-QDERLCVWDRFQG 156 (166)
Q Consensus 121 ~~~~-~~~~v~~i~~~~-~~l~~~~-~d~~i~~wd~~~~ 156 (166)
.... .......++..+ ..++.+. .++.|..+|..++
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 2211 111223343333 4444444 4788888887643
No 306
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=90.31 E-value=1 Score=34.74 Aligned_cols=72 Identities=17% Similarity=0.116 Sum_probs=44.9
Q ss_pred EEEEecCCCceEEEeecccccceeeceee--------eeeeec-----cCCceEEEEecCcEEEEEecCCeEEEEEcccc
Q psy16373 8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCK--------VESTRA-----HHQPITVLECVSNRVITGSQDHTLKVYKLEDQ 74 (166)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~-----~~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~ 74 (166)
..+++-.+||++++..... .+....... ..-+.+ ....|.++.++..++++-+.|+++|+|+++++
T Consensus 173 ~liVsL~DGGLLrL~r~~~-~d~~~~~Fnd~s~l~SL~~lf~~~~~~~~~~~Is~~~~~~~fLftL~~Dh~LRiWsL~t~ 251 (729)
T 3f7f_A 173 FSVVFLEDGGLLGLKKVDG-VHYEPLLFNDNSYLKCLTRFFSRSSKSDYDSVISCKLFHERYLIVLTQNCHLKIWDLTSF 251 (729)
T ss_dssp BEEEEETTSCEECCEESSS-SCEECCCCCCCGGGGGGSTTCCTTCSSCCCCEEEEEEETTTEEEEEETTCEEEEEETTTT
T ss_pred eEEEEEcCCCEEEEEeccC-CCcceeeecCCchhhhhHHhhcCCCCCCcCceEEEeccCCcEEEEEEcCCeEEEEEcCCC
Confidence 3677778888887765432 111100000 000111 22346777778889999999999999999998
Q ss_pred cceehh
Q psy16373 75 QLLFTL 80 (166)
Q Consensus 75 ~~~~~~ 80 (166)
+++...
T Consensus 252 ~lv~t~ 257 (729)
T 3f7f_A 252 TLIQDY 257 (729)
T ss_dssp EEEEEE
T ss_pred ceEEee
Confidence 866544
No 307
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=90.20 E-value=6.8 Score=32.16 Aligned_cols=109 Identities=11% Similarity=0.105 Sum_probs=65.9
Q ss_pred cCCceEEEEe-cCcEEEEEecCCeEEEEEccccccee-hhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc--CCee
Q psy16373 43 HHQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLF-TLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV--TGAC 118 (166)
Q Consensus 43 ~~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~--~~~~ 118 (166)
..+++++++- .| +|++| ....+++|++...+.+. ....+. .+..+.....+++++.|+.-..+.+...+ ..+
T Consensus 884 v~g~v~al~~~~g-~Lla~-ig~~l~vy~l~~~~~L~~~~~~~~-~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~- 959 (1158)
T 3ei3_A 884 VKGAVYSMVEFNG-KLLAS-INSTVRLYEWTTEKELRTECNHYN-NIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGN- 959 (1158)
T ss_dssp ESSCEEEEEEETT-EEEEE-ETTEEEEEEECTTSCEEEEEEECC-CSCEEEEEEETTEEEEEESSBCEEEEEEETTTTE-
T ss_pred cCCcCEEEeeeCC-EEEEE-cCCEEEEEECCCCceEEEEeeccc-cEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCe-
Confidence 4678999998 66 44443 35799999998655433 111111 12222332346788888877777765433 332
Q ss_pred eEEee--cccccEEEEEEc-CCeEEEeecCCcEEEEECCc
Q psy16373 119 MYSIQ--AHDGCIHALTYS-DSYVISLGQDERLCVWDRFQ 155 (166)
Q Consensus 119 ~~~~~--~~~~~v~~i~~~-~~~l~~~~~d~~i~~wd~~~ 155 (166)
+..+. .....++++.+- .+.++.+..++.|.+.....
T Consensus 960 L~~~a~D~~~~~vta~~~ld~~t~l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 960 FEEIARDFNPNWMSAVEILDDDNFLGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEEEECCSCBCEEEEEEEETTEEEEEETTSEEEEEEECT
T ss_pred EEEEEeecccccEEEEEEEccCcEEEEcCCCcEEEEecCC
Confidence 22222 234567777774 47888899999988886543
No 308
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=89.72 E-value=4.3 Score=29.14 Aligned_cols=110 Identities=10% Similarity=0.058 Sum_probs=61.7
Q ss_pred eEEEEec----CcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCC---Cc-EEEEeCcCCee
Q psy16373 47 ITVLECV----SNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQD---GL-LCVWDTVTGAC 118 (166)
Q Consensus 47 i~~~~~~----~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d---~~-v~~~d~~~~~~ 118 (166)
...++++ ...|+.+...+.|+.+|..+++.... .........++++++++++++.... .. +...+...+..
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~-~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIK-TTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEE-CCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEe-ecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence 4577774 25566665558899999877655433 2244568899999999866554322 12 33333222211
Q ss_pred -eEEeecccccEEEEEEcC--CeEEEee-cCCcEEEEECCcccc
Q psy16373 119 -MYSIQAHDGCIHALTYSD--SYVISLG-QDERLCVWDRFQGHL 158 (166)
Q Consensus 119 -~~~~~~~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~~~~~ 158 (166)
...+. .-.....+++++ ..|+.+. .++.|+.+|..++..
T Consensus 220 ~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 220 ERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL 262 (433)
T ss_dssp CEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE
T ss_pred cccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE
Confidence 01111 112234566776 3555444 466788888776654
No 309
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=88.93 E-value=1.8 Score=30.09 Aligned_cols=67 Identities=13% Similarity=0.146 Sum_probs=45.7
Q ss_pred CEEEEecCCCcEEEEeCcCCeeeEEeeccc-ccEEEEEEc----CCeEEEe--ecCCcEEEEECCcccceeeee
Q psy16373 97 MMSGSGSQDGLLCVWDTVTGACMYSIQAHD-GCIHALTYS----DSYVISL--GQDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 97 ~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~-~~v~~i~~~----~~~l~~~--~~d~~i~~wd~~~~~~~~~~~ 163 (166)
..++.++.||.+.-+|.++|+....+.... .++....-. .+.++.+ ..||.|..++..+|.....+.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~ 84 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLS 84 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeec
Confidence 467788999999999999999999887541 232221111 1234433 579999999998886655443
No 310
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=88.52 E-value=3.5 Score=33.62 Aligned_cols=36 Identities=25% Similarity=0.155 Sum_probs=29.3
Q ss_pred eEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEe
Q psy16373 87 ITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSI 122 (166)
Q Consensus 87 v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~ 122 (166)
+.+++..++..++.+-+.|+++++|++.++.++.+.
T Consensus 240 ~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 240 IISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp BSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 345556677788889999999999999999887764
No 311
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=88.40 E-value=4.3 Score=27.40 Aligned_cols=104 Identities=10% Similarity=0.074 Sum_probs=54.4
Q ss_pred ecCcEEEEEecC-------CeEEEEEccccccee--hhcCCCCceEEEEEcCCCCEEEEecC------CCcEEEEeCcCC
Q psy16373 52 CVSNRVITGSQD-------HTLKVYKLEDQQLLF--TLHGHCGPITTLFIDGVSMMSGSGSQ------DGLLCVWDTVTG 116 (166)
Q Consensus 52 ~~~~~l~~~~~d-------~~v~v~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~------d~~v~~~d~~~~ 116 (166)
.++..++.|+.+ ..+.+||..+.+... .+......-..+. .++..++.|+. -..+.+||+.+.
T Consensus 108 ~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 108 VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTT
T ss_pred ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCC
Confidence 377777777754 357788887654322 2221111112222 34566666654 235889998876
Q ss_pred eee--EEeecccccEEEEEEcCCeEEEeecC-----CcEEEEECCccc
Q psy16373 117 ACM--YSIQAHDGCIHALTYSDSYVISLGQD-----ERLCVWDRFQGH 157 (166)
Q Consensus 117 ~~~--~~~~~~~~~v~~i~~~~~~l~~~~~d-----~~i~~wd~~~~~ 157 (166)
+-. ..+.........+.+....++.|+.+ ..+.+||+.+.+
T Consensus 186 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 186 DWKDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEEECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 432 22222222233344444555666543 356788887654
No 312
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=88.14 E-value=2.7 Score=34.28 Aligned_cols=28 Identities=29% Similarity=0.343 Sum_probs=25.4
Q ss_pred CeEEEeecCCcEEEEECCcccceeeeee
Q psy16373 137 SYVISLGQDERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 137 ~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 164 (166)
.++++.+.|+++|+|++.+++++.+..+
T Consensus 250 ~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 250 NVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp TEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred cEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 5899999999999999999999988764
No 313
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=88.13 E-value=4.7 Score=27.54 Aligned_cols=104 Identities=8% Similarity=0.092 Sum_probs=58.3
Q ss_pred CceEEEEe-cCcEEEEEecCCeEE-EEEc-ccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeC--cCCeee
Q psy16373 45 QPITVLEC-VSNRVITGSQDHTLK-VYKL-EDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT--VTGACM 119 (166)
Q Consensus 45 ~~i~~~~~-~~~~l~~~~~d~~v~-v~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~--~~~~~~ 119 (166)
..+..+.+ .+..++.++.++.+. -.|- ++.+.+. ......+..+.+.+++..++.+...+..+-.|- .+.+.+
T Consensus 122 ~~~~~i~~~~~~~~~~~~~~g~v~~S~DgG~tW~~~~--~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~ 199 (327)
T 2xbg_A 122 GSPRLIKALGNGSAEMITNVGAIYRTKDSGKNWQALV--QEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPH 199 (327)
T ss_dssp SCEEEEEEEETTEEEEEETTCCEEEESSTTSSEEEEE--CSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEE
T ss_pred CCeEEEEEECCCCEEEEeCCccEEEEcCCCCCCEEee--cCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeEC
Confidence 34666776 444444445556442 2221 1112221 234456889999998888877655444444552 344444
Q ss_pred EEeecccccEEEEEEcC-CeEEEeecCCcEEEEE
Q psy16373 120 YSIQAHDGCIHALTYSD-SYVISLGQDERLCVWD 152 (166)
Q Consensus 120 ~~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd 152 (166)
. ......+..+.+.+ +.++.++.++.++..+
T Consensus 200 ~--~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~ 231 (327)
T 2xbg_A 200 N--RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSD 231 (327)
T ss_dssp E--CCSSSCEEEEEECTTSCEEEEETTTEEEEEE
T ss_pred C--CCCCCccceeEECCCCCEEEEeCCceEEEec
Confidence 2 22345678888876 4666667777776663
No 314
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=88.01 E-value=5.5 Score=28.19 Aligned_cols=110 Identities=11% Similarity=-0.074 Sum_probs=66.1
Q ss_pred ceEEEEe---cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecC-CCcEEEEeCcCCeeeE
Q psy16373 46 PITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQ-DGLLCVWDTVTGACMY 120 (166)
Q Consensus 46 ~i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~-d~~v~~~d~~~~~~~~ 120 (166)
....+++ .+++.++-...+.|.+.++........+.........++++|. +.++.+-.. .+.|...++.......
T Consensus 160 ~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 239 (400)
T 3p5b_L 160 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 239 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEE
T ss_pred CcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEE
Confidence 4556666 3445555556788988888754333333333445789999986 445554422 4688888876433222
Q ss_pred EeecccccEEEEEEcC--CeEEEee-cCCcEEEEECCc
Q psy16373 121 SIQAHDGCIHALTYSD--SYVISLG-QDERLCVWDRFQ 155 (166)
Q Consensus 121 ~~~~~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~~ 155 (166)
.....-...+.|++++ +.|+.+. ..+.|..+|+..
T Consensus 240 ~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 240 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC
Confidence 2222224567889986 4666664 456788888753
No 315
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=87.44 E-value=6.3 Score=28.27 Aligned_cols=69 Identities=9% Similarity=0.065 Sum_probs=45.5
Q ss_pred ceEEEEEcC-CCCEEEEecCCCcEEEEeCcCCeeeEEe-ecc-cccEEEEEEcC--CeEEEee-cCCcEEEEECC
Q psy16373 86 PITTLFIDG-VSMMSGSGSQDGLLCVWDTVTGACMYSI-QAH-DGCIHALTYSD--SYVISLG-QDERLCVWDRF 154 (166)
Q Consensus 86 ~v~~~~~~~-~~~~~~~~~~d~~v~~~d~~~~~~~~~~-~~~-~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~ 154 (166)
....++++| ++..+++-..++.|+.+|..++.....+ ... ...-..++|+| +.|+.+. ..+.|..++..
T Consensus 229 ~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 346788899 6777777777889999998877652222 211 12234699998 3455554 46788887754
No 316
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=87.31 E-value=7 Score=28.62 Aligned_cols=121 Identities=10% Similarity=0.134 Sum_probs=78.0
Q ss_pred eeeeccCCceEEEEecC-----cEEEEEecC---CeEEEEEcccc---ccee-----h-h---cCCCCceEEEEEcCCCC
Q psy16373 38 ESTRAHHQPITVLECVS-----NRVITGSQD---HTLKVYKLEDQ---QLLF-----T-L---HGHCGPITTLFIDGVSM 97 (166)
Q Consensus 38 ~~~~~~~~~i~~~~~~~-----~~l~~~~~d---~~v~v~~~~~~---~~~~-----~-~---~~~~~~v~~~~~~~~~~ 97 (166)
+.++||.+....+..++ ..++.+... +.+++.++... .... . + ..-.+...++.+++...
T Consensus 192 Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg 271 (494)
T 1bpo_A 192 QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD 271 (494)
T ss_dssp EEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT
T ss_pred chheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC
Confidence 44567766665555532 234444442 78999988542 1100 1 0 11234567888888877
Q ss_pred EEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC--CeEEEeecCCcEEEEECCcccc
Q psy16373 98 MSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD--SYVISLGQDERLCVWDRFQGHL 158 (166)
Q Consensus 98 ~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~--~~l~~~~~d~~i~~wd~~~~~~ 158 (166)
.+..-+.-|.+.++|+.++.++..-+-...+|..-+.+. .-++.....|.|.--.+.....
T Consensus 272 viyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e~~i 334 (494)
T 1bpo_A 272 VVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENI 334 (494)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECTTTH
T ss_pred EEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEccccc
Confidence 777788999999999999999987766666766555543 4667777777776665554443
No 317
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=87.18 E-value=9.3 Score=29.95 Aligned_cols=118 Identities=10% Similarity=-0.004 Sum_probs=69.3
Q ss_pred CceEEEEe--cCcEEEEEec--CCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeee
Q psy16373 45 QPITVLEC--VSNRVITGSQ--DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACM 119 (166)
Q Consensus 45 ~~i~~~~~--~~~~l~~~~~--d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~ 119 (166)
.....|++ ....|+.... .+.|.+.++........+.........|++++. +.++++-.....|...++......
T Consensus 514 ~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~ 593 (791)
T 3m0c_C 514 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK 593 (791)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceE
Confidence 34567777 3345554442 367888887643332222223356789999976 445555556678999998644332
Q ss_pred EEeecc--cccEEEEEEcCCeEEEee-cCCcEEEEECCcccceeee
Q psy16373 120 YSIQAH--DGCIHALTYSDSYVISLG-QDERLCVWDRFQGHLLSTI 162 (166)
Q Consensus 120 ~~~~~~--~~~v~~i~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~ 162 (166)
..+... -....+|++..+.|+.+. ..+.|...|..+|+.+..+
T Consensus 594 ~v~~~~~~l~~P~glav~~~~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 594 TILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEecCCCccCCCCEEEEeCCEEEEEECCCCEEEEEeCCCCcceEEe
Confidence 222221 123346676666666555 4577888887777766555
No 318
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=87.04 E-value=5.4 Score=27.07 Aligned_cols=117 Identities=13% Similarity=0.044 Sum_probs=68.9
Q ss_pred CceEEEEe--cCcEEEEEec-C-CeEEEEEcccccceehh-cCCCCceEEEEEcCCC-CEEEEecCCCcEEEEeCcCCee
Q psy16373 45 QPITVLEC--VSNRVITGSQ-D-HTLKVYKLEDQQLLFTL-HGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGAC 118 (166)
Q Consensus 45 ~~i~~~~~--~~~~l~~~~~-d-~~v~v~~~~~~~~~~~~-~~~~~~v~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~~~ 118 (166)
.....+++ .+..|+.+.. . +.|...+.... ....+ ...-.....+++++++ ..+++-...+.|..+|+....
T Consensus 120 ~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~- 197 (316)
T 1ijq_A 120 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN- 197 (316)
T ss_dssp CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-
T ss_pred CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-
Confidence 34567777 3455554443 2 67888877532 22222 1223457899999874 455555667799999986432
Q ss_pred eEEe-ec--ccccEEEEEEcCCeEEEee-cCCcEEEEECCcccceeeee
Q psy16373 119 MYSI-QA--HDGCIHALTYSDSYVISLG-QDERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 119 ~~~~-~~--~~~~v~~i~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~~ 163 (166)
...+ .. .-.....+++..+.++.+. ..+.|..+|..+++.+..+.
T Consensus 198 ~~~~~~~~~~~~~P~giav~~~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 198 RKTILEDEKRLAHPFSLAVFEDKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp CEEEEECTTTTSSEEEEEEETTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred eEEEeecCCccCCcEEEEEECCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 2222 21 1223456676666555544 56789999987887666553
No 319
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=86.83 E-value=5.8 Score=27.20 Aligned_cols=58 Identities=9% Similarity=-0.063 Sum_probs=31.8
Q ss_pred cEEEEeCcCC--eeeEEeecccccEEEEEEcCCeEEEeecCC------cEEEEECCcccceeeeee
Q psy16373 107 LLCVWDTVTG--ACMYSIQAHDGCIHALTYSDSYVISLGQDE------RLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 107 ~v~~~d~~~~--~~~~~~~~~~~~v~~i~~~~~~l~~~~~d~------~i~~wd~~~~~~~~~~~~ 164 (166)
.+.+||+.+. ..+..+........++.+....++.|+.++ .+.++++++++.+...+.
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence 4678888754 344444333333344555556777777542 466668888887765544
No 320
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=85.75 E-value=6.6 Score=26.82 Aligned_cols=107 Identities=10% Similarity=-0.037 Sum_probs=63.1
Q ss_pred eEEEEe---cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEec-CCCcEEEEeCcCCeeeEE
Q psy16373 47 ITVLEC---VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGS-QDGLLCVWDTVTGACMYS 121 (166)
Q Consensus 47 i~~~~~---~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~-~d~~v~~~d~~~~~~~~~ 121 (166)
...+++ .+++.++-...+.|.+++.........+.........++++|. +.++.+-. ..+.|...++.... ...
T Consensus 81 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~ 159 (318)
T 3sov_A 81 PDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-RFI 159 (318)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS-CEE
T ss_pred ccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC-eEE
Confidence 344555 3445555556788999998754322222233455789999986 44455442 35788888875332 222
Q ss_pred e-ecccccEEEEEEcC--CeEEEee-cCCcEEEEECC
Q psy16373 122 I-QAHDGCIHALTYSD--SYVISLG-QDERLCVWDRF 154 (166)
Q Consensus 122 ~-~~~~~~v~~i~~~~--~~l~~~~-~d~~i~~wd~~ 154 (166)
+ ...-...+.+++++ +.|+.+. ..+.|..+|+.
T Consensus 160 ~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~d 196 (318)
T 3sov_A 160 IINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLD 196 (318)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred EEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCC
Confidence 2 22223457899986 4565554 45778888875
No 321
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=85.06 E-value=8 Score=27.16 Aligned_cols=94 Identities=7% Similarity=0.081 Sum_probs=62.5
Q ss_pred CeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEcC-CeEEEe
Q psy16373 64 HTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYSD-SYVISL 142 (166)
Q Consensus 64 ~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~-~~l~~~ 142 (166)
..|.+.|+.+.....+.. . ..-+.-.+|....++.-. ..++.++|+++.+.+..+.- .+.|.--.|-. +.|...
T Consensus 49 ~~VvIiDl~n~~~~~Rrp--i-~AdsAIMnP~~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~~L~lV 123 (365)
T 2xzh_A 49 AQVVIIDMNDPSNPIRRP--I-SADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVALV 123 (365)
T ss_dssp EEEEEEETTSTTSCEEEE--C-CCSEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSSEEEEE
T ss_pred CEEEEEECCCCCCccccc--c-ccceeeeCCCccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCCeEEEE
Confidence 478888998754432111 0 112334588888777765 67899999999999988875 45776777754 666555
Q ss_pred ecCCcEEEEECCc-ccceeeee
Q psy16373 143 GQDERLCVWDRFQ-GHLLSTIQ 163 (166)
Q Consensus 143 ~~d~~i~~wd~~~-~~~~~~~~ 163 (166)
+ +..|+.|++.. ..+++.+.
T Consensus 124 T-~taVyHWs~~~~s~P~kvFd 144 (365)
T 2xzh_A 124 T-DNAVYHWSMEGESQPVKMFD 144 (365)
T ss_dssp E-SSEEEEEESSTTCCCEEEEE
T ss_pred c-CCcEEEEcccCCCCCceeee
Confidence 5 46899999864 34444444
No 322
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=84.72 E-value=7 Score=26.27 Aligned_cols=103 Identities=12% Similarity=0.074 Sum_probs=53.8
Q ss_pred cCcEEEEEec-----------CCeEEEEEcccccce--ehhcCCCCceEEEEEcCCCCEEEEecCC--------CcEEEE
Q psy16373 53 VSNRVITGSQ-----------DHTLKVYKLEDQQLL--FTLHGHCGPITTLFIDGVSMMSGSGSQD--------GLLCVW 111 (166)
Q Consensus 53 ~~~~l~~~~~-----------d~~v~v~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~~~~~~~d--------~~v~~~ 111 (166)
++..++.|+. ...+..||..+.+.. ..+......-....+ ++..++.|+.+ ..+.++
T Consensus 45 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~ 122 (315)
T 4asc_A 45 ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCY 122 (315)
T ss_dssp TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEE
T ss_pred CCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEE
Confidence 7777777773 122778888775432 122111111122222 45666666632 358889
Q ss_pred eCcCCee--eEEeecccccEEEEEEcCCeEEEeec-C-----CcEEEEECCccc
Q psy16373 112 DTVTGAC--MYSIQAHDGCIHALTYSDSYVISLGQ-D-----ERLCVWDRFQGH 157 (166)
Q Consensus 112 d~~~~~~--~~~~~~~~~~v~~i~~~~~~l~~~~~-d-----~~i~~wd~~~~~ 157 (166)
|+.+.+- +..+.........+......++.|+. + ..+.+||+.+.+
T Consensus 123 d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 123 DRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp ETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred CCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 9876642 22222222233334444455666665 2 468888887654
No 323
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=83.09 E-value=5.6 Score=30.06 Aligned_cols=69 Identities=4% Similarity=-0.148 Sum_probs=46.5
Q ss_pred eEEEEEcCCCCEEEEec-CCCcEEEEeCcCC------ee-------eEEeecccccEEEEEEcC-CeEEEee-cCCcEEE
Q psy16373 87 ITTLFIDGVSMMSGSGS-QDGLLCVWDTVTG------AC-------MYSIQAHDGCIHALTYSD-SYVISLG-QDERLCV 150 (166)
Q Consensus 87 v~~~~~~~~~~~~~~~~-~d~~v~~~d~~~~------~~-------~~~~~~~~~~v~~i~~~~-~~l~~~~-~d~~i~~ 150 (166)
...+.++|+|.+++.++ .+.++.++|++.- +. ..... -.-.....+|++ ...+|.- .|..|..
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvk 403 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVK 403 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEE
Confidence 46788999998877654 5779999998732 11 11222 123456788987 4555554 6999999
Q ss_pred EECCcc
Q psy16373 151 WDRFQG 156 (166)
Q Consensus 151 wd~~~~ 156 (166)
|++...
T Consensus 404 Wni~~a 409 (638)
T 3sbq_A 404 WNMEEA 409 (638)
T ss_dssp EEHHHH
T ss_pred EeccHH
Confidence 999764
No 324
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=82.84 E-value=14 Score=28.38 Aligned_cols=110 Identities=16% Similarity=0.144 Sum_probs=63.0
Q ss_pred CceEEEEe-cCcEEEEEecCCeEEEEEccccccee-hhcC----CCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee
Q psy16373 45 QPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLF-TLHG----HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC 118 (166)
Q Consensus 45 ~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~-~~~~----~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~ 118 (166)
..|.++.. ....|..|..+ .+..++..+++... .... ....|.++...+++..+..|+. +-+..+|..+++.
T Consensus 146 ~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~ 223 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYVGTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQI 223 (758)
T ss_dssp SCEEEEEECTTCCEEEEETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEE
T ss_pred CeEEEEEEcCCCCEEEEeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeE
Confidence 35777777 34555556654 57778876654321 1111 1234888888776654334443 3577888776643
Q ss_pred eEEeecccccEEEEEEcC-CeEEEeecCCcEEEEECCccc
Q psy16373 119 MYSIQAHDGCIHALTYSD-SYVISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 119 ~~~~~~~~~~v~~i~~~~-~~l~~~~~d~~i~~wd~~~~~ 157 (166)
..........|.++...+ +.|..|+. +-+.+++..+++
T Consensus 224 ~~~~~l~~~~i~~i~~d~~g~lWigT~-~Gl~~~~~~~~~ 262 (758)
T 3ott_A 224 KQTEAFHNNSIKSLALDGNGDLLAGTD-NGLYVYHNDTTP 262 (758)
T ss_dssp EEEEEEEEEEEEEEEECTTCCEEEEET-TEEEEECCTTSC
T ss_pred EeccCCCCCeEEEEEEcCCCCEEEEeC-CceeEEecCCCc
Confidence 221111234577777765 57777774 457888876543
No 325
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=81.87 E-value=2.3 Score=27.90 Aligned_cols=64 Identities=11% Similarity=0.107 Sum_probs=40.2
Q ss_pred ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeeccccc--------EEEEEEcCC-eEEEeecCCcEEEEEC
Q psy16373 86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGC--------IHALTYSDS-YVISLGQDERLCVWDR 153 (166)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~--------v~~i~~~~~-~l~~~~~d~~i~~wd~ 153 (166)
.+..++|+|++.+.+. .+|.+.-.+..+... ..+.+.... -.++.|+++ .|+.+ .|+.|+-++.
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~-~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav-~dG~iyr~~p 114 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDN-DNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV-SKDKLYKASP 114 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTT-CCHHHHCEEEECSCGGGCSEEEECTTSCEEEE-ETTEEEEESC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCc-ccccccccEecccccccceEEEECCCCCEEEe-CCCEEEEeCC
Confidence 5679999999998877 677777666544211 111111112 257888884 55555 6798887775
No 326
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=79.77 E-value=13 Score=25.99 Aligned_cols=107 Identities=9% Similarity=0.178 Sum_probs=61.9
Q ss_pred ceEEEEe----cCc-EEEEE-ec--CCeEEEEEccccc----ceehhcCC-CCceEEEEEcCCCCEEEEecC--------
Q psy16373 46 PITVLEC----VSN-RVITG-SQ--DHTLKVYKLEDQQ----LLFTLHGH-CGPITTLFIDGVSMMSGSGSQ-------- 104 (166)
Q Consensus 46 ~i~~~~~----~~~-~l~~~-~~--d~~v~v~~~~~~~----~~~~~~~~-~~~v~~~~~~~~~~~~~~~~~-------- 104 (166)
....+.+ ++. +|+.+ .. +..+.+|++.... .+..+.+. -...+++.+.++|..+++...
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~ 192 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLK 192 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHH
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccc
Confidence 4556666 233 34444 22 5678888876532 22333322 245789999999988877541
Q ss_pred ---------CCcEEEEeCcCCeeeEEeecccccEEEEEEcCC--eEEEee-cCCcEEEEECCc
Q psy16373 105 ---------DGLLCVWDTVTGACMYSIQAHDGCIHALTYSDS--YVISLG-QDERLCVWDRFQ 155 (166)
Q Consensus 105 ---------d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~~~--~l~~~~-~d~~i~~wd~~~ 155 (166)
.|.+.-+|. ++ +..+...-..-+.++|+|+ .++.+. ..+.|..|++..
T Consensus 193 ~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 193 SWEMHLGLAWSFVTYYSP--ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp HHHHHTTCCCEEEEEECT--TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cchhhccCCccEEEEEEC--Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 234444554 32 2222222235688999984 555554 578899999864
No 327
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=79.53 E-value=16 Score=26.81 Aligned_cols=95 Identities=8% Similarity=0.069 Sum_probs=62.2
Q ss_pred CCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEE-cCCeEEE
Q psy16373 63 DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTY-SDSYVIS 141 (166)
Q Consensus 63 d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~-~~~~l~~ 141 (166)
...|.+.|+.+.....+.. -..-+.-.+|..+.++.-. ..++.++|+++...+..+.-. +.|.--.| +++.|..
T Consensus 47 ~~~vvIiDl~~~~~~~rrp---i~AdsAIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~-e~VvfWkWis~~~l~l 121 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRP---ISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMT-DDVTFWKWISLNTVAL 121 (494)
T ss_dssp CCEEEEEETTSTTSCEEEE---CCCSEEEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECS-SCCCEEEEEETTEEEE
T ss_pred CCeEEEEECCCCCcceecc---cccceeeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecC-CCceEEEecCCCeEEE
Confidence 3478888988754432111 0112344688887777665 679999999999999888753 45655666 4566655
Q ss_pred eecCCcEEEEECCc-ccceeeee
Q psy16373 142 LGQDERLCVWDRFQ-GHLLSTIQ 163 (166)
Q Consensus 142 ~~~d~~i~~wd~~~-~~~~~~~~ 163 (166)
.+ +..|+.|++.. ..+++.+.
T Consensus 122 VT-~taVyHWsi~~~s~P~kvFd 143 (494)
T 1bpo_A 122 VT-DNAVYHWSMEGESQPVKMFD 143 (494)
T ss_dssp EC-SSEEEEEESSSSCCCEEEEE
T ss_pred Ec-CCeeEEecccCCCCchhhee
Confidence 55 56899999864 34444444
No 328
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=78.84 E-value=14 Score=25.89 Aligned_cols=114 Identities=11% Similarity=0.175 Sum_probs=66.4
Q ss_pred EEEEecCCCceEEEeecccccceeeceeeeeeeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcc-----cccceehh
Q psy16373 8 IHLRTGSAGSLLDFKKMQVEEEMTLTCCKVESTRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLE-----DQQLLFTL 80 (166)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~-----~~~~~~~~ 80 (166)
+.+++... +.+..|............+.++++.-. ..+..+.. ....|+.+-.+..|..++.+ +.+.+..+
T Consensus 145 yafV~~k~-G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~ 222 (355)
T 3amr_A 145 YAMVTGKE-GEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRA 222 (355)
T ss_dssp EEEEECSS-SEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEB
T ss_pred EEEEECCC-CeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEe
Confidence 34444444 555555554332223344555555532 35566666 56789999988777666754 23344333
Q ss_pred c-CC-CCceEEEEE--cCCCC--EEEEecCCCcEEEEeCc-CCeeeEEee
Q psy16373 81 H-GH-CGPITTLFI--DGVSM--MSGSGSQDGLLCVWDTV-TGACMYSIQ 123 (166)
Q Consensus 81 ~-~~-~~~v~~~~~--~~~~~--~~~~~~~d~~v~~~d~~-~~~~~~~~~ 123 (166)
. ++ ...+..|++ .+++. .++++-.+.++.+||.+ +.+.+..|.
T Consensus 223 ~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 223 DGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp SSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred cCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 2 22 236888887 44444 44554467799999997 667777774
No 329
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=78.47 E-value=15 Score=25.71 Aligned_cols=71 Identities=14% Similarity=0.060 Sum_probs=45.7
Q ss_pred CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee--eEEe----ecccccEEEEEEcCC-----eEEEe---ecCCcEEE
Q psy16373 85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC--MYSI----QAHDGCIHALTYSDS-----YVISL---GQDERLCV 150 (166)
Q Consensus 85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~--~~~~----~~~~~~v~~i~~~~~-----~l~~~---~~d~~i~~ 150 (166)
.....+++.|++..+++--..|.|++++..+++. +..+ .........|+++|+ .|+.. ..++.|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 4568999999999888765589999998665543 2222 122456789999983 44432 23455655
Q ss_pred EECCc
Q psy16373 151 WDRFQ 155 (166)
Q Consensus 151 wd~~~ 155 (166)
|....
T Consensus 112 ~~~~~ 116 (347)
T 3das_A 112 MLYDE 116 (347)
T ss_dssp EEBCT
T ss_pred EEeCC
Confidence 65543
No 330
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=75.64 E-value=15 Score=24.54 Aligned_cols=104 Identities=7% Similarity=0.068 Sum_probs=53.9
Q ss_pred CceEEEEe-cCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEee
Q psy16373 45 QPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQ 123 (166)
Q Consensus 45 ~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~ 123 (166)
..|..++. ....++. . ||.|..|-......+..-..-...|..++.......+ -. ||.+..|-....-.+..-.
T Consensus 63 ~~i~~ia~G~~hs~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~hs~a--l~-~G~v~~wG~n~~gqlg~~~ 137 (282)
T 3qhy_B 63 SGVDAIAAGNYHSLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAWASYA--LK-DGKVIAWGDDSDGQTTVPA 137 (282)
T ss_dssp SCCCEEEECSSEEEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETTEEEE--EE-TTEEEEEECCTTSTTSCCG
T ss_pred CCEEEEEeCCCEEEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCCEEEE--Ee-CCeEEEecCCCCCcCCCCc
Confidence 35777777 4444444 4 8999999876432221111112357777665433333 24 8888888654321111111
Q ss_pred cccccEEEEEEcCCeEEEeecCCcEEEEECC
Q psy16373 124 AHDGCIHALTYSDSYVISLGQDERLCVWDRF 154 (166)
Q Consensus 124 ~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~ 154 (166)
.....|..++....+.+.-. |+.+..|-..
T Consensus 138 ~~~~~i~~i~~G~~~~~~l~-~G~v~~wG~n 167 (282)
T 3qhy_B 138 EAQSGVTALDGGVYTALAVK-NGGVIAWGDN 167 (282)
T ss_dssp GGGSSEEEEEECSSEEEEEE-TTEEEEEECC
T ss_pred cCCCCeEEEEcccCEEEEEE-CCEEEEecCC
Confidence 12235666665554433334 6777777543
No 331
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=73.19 E-value=44 Score=28.73 Aligned_cols=94 Identities=12% Similarity=0.143 Sum_probs=56.4
Q ss_pred CeEEEEEcccc---cceeh------hc---CCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEE
Q psy16373 64 HTLKVYKLEDQ---QLLFT------LH---GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHA 131 (166)
Q Consensus 64 ~~v~v~~~~~~---~~~~~------~~---~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~ 131 (166)
+.+++.++... .+... +. ...+...++..++....+..-+.-|.+.++|+.++.++..-+-...+|..
T Consensus 226 ~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~ 305 (1630)
T 1xi4_A 226 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFV 305 (1630)
T ss_pred ceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEE
Confidence 78888888543 11110 00 11233456777777667777788999999999999887765544455544
Q ss_pred EEEcC--CeEEEeecCCcEEEEECCccc
Q psy16373 132 LTYSD--SYVISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 132 i~~~~--~~l~~~~~d~~i~~wd~~~~~ 157 (166)
.+.++ .-++.....|.|.--.+....
T Consensus 306 ~~~~~~~~g~~~vnr~G~vl~v~v~~~~ 333 (1630)
T 1xi4_A 306 TAPHEATAGIIGVNRKGQVLSVCVEEEN 333 (1630)
T ss_pred eccCCCCCceEEEcCCceEEEEEEccch
Confidence 44333 345555566665554444433
No 332
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=72.99 E-value=30 Score=26.61 Aligned_cols=111 Identities=12% Similarity=0.042 Sum_probs=61.9
Q ss_pred EEEEe-cCcEEEEEecCC--eEEEEEcccccceeh-----hcCCCCceEEEEEcCC-CCEEEEecC--C-----CcEEEE
Q psy16373 48 TVLEC-VSNRVITGSQDH--TLKVYKLEDQQLLFT-----LHGHCGPITTLFIDGV-SMMSGSGSQ--D-----GLLCVW 111 (166)
Q Consensus 48 ~~~~~-~~~~l~~~~~d~--~v~v~~~~~~~~~~~-----~~~~~~~v~~~~~~~~-~~~~~~~~~--d-----~~v~~~ 111 (166)
.+..+ ++..++.|+.++ .+.+||..+.+.... +........++.+... +..++.|+. + ..+..|
T Consensus 494 ~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~y 573 (695)
T 2zwa_A 494 SACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIF 573 (695)
T ss_dssp EEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEE
T ss_pred eEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEE
Confidence 34444 777788887654 688999987643221 1111222233455544 667777765 2 358889
Q ss_pred eCcCCe--------eeEEe-ecccccEEEEEEc-CCeEEEeec--------CCcEEEEECCcccc
Q psy16373 112 DTVTGA--------CMYSI-QAHDGCIHALTYS-DSYVISLGQ--------DERLCVWDRFQGHL 158 (166)
Q Consensus 112 d~~~~~--------~~~~~-~~~~~~v~~i~~~-~~~l~~~~~--------d~~i~~wd~~~~~~ 158 (166)
|+.+.. .+... .........+.+. ...++.|+. ...+.+||+.+.+.
T Consensus 574 d~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 574 KYDAENATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp EECTTCSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred EccCCccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 987665 11111 1112233445566 455566653 34688999887653
No 333
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=71.94 E-value=22 Score=24.65 Aligned_cols=69 Identities=12% Similarity=0.029 Sum_probs=43.3
Q ss_pred CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCe-eeEEee---cccccEEEEEEcCC-----eEEEeec----C----Cc
Q psy16373 85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGA-CMYSIQ---AHDGCIHALTYSDS-----YVISLGQ----D----ER 147 (166)
Q Consensus 85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~-~~~~~~---~~~~~v~~i~~~~~-----~l~~~~~----d----~~ 147 (166)
.....+++.|+++++++ ..++.|+++| .+++ .+..+. ........|+++|+ .|+.+.. + ..
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~ 106 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNR 106 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceE
Confidence 34678999999986665 4568999887 3454 222221 12345788999985 5655543 2 56
Q ss_pred EEEEECCc
Q psy16373 148 LCVWDRFQ 155 (166)
Q Consensus 148 i~~wd~~~ 155 (166)
|..|+...
T Consensus 107 v~r~~~~~ 114 (354)
T 3a9g_A 107 VIRGRLDG 114 (354)
T ss_dssp EEEEEECS
T ss_pred EEEEEECC
Confidence 77777654
No 334
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=71.65 E-value=20 Score=24.01 Aligned_cols=106 Identities=8% Similarity=0.020 Sum_probs=58.8
Q ss_pred CceEEEEecCcEEEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeec
Q psy16373 45 QPITVLECVSNRVITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQA 124 (166)
Q Consensus 45 ~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~ 124 (166)
..|..++......+.-. +|.|..|-......+..-......|..++.......++ . ||.+..|-....-.+..-..
T Consensus 102 ~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~l--~-~G~v~~wG~n~~gqlg~p~~ 177 (282)
T 3qhy_B 102 SGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALAV--K-NGGVIAWGDNYFGQTTVPAE 177 (282)
T ss_dssp SSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEEE--E-TTEEEEEECCTTSTTSCCGG
T ss_pred CCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEEE--E-CCEEEEecCCCCCCCCCcee
Confidence 36788888444444445 99999998765322211111234577776644332222 3 68899886543211111111
Q ss_pred ccccEEEEEEcCCeEEEeecCCcEEEEECCc
Q psy16373 125 HDGCIHALTYSDSYVISLGQDERLCVWDRFQ 155 (166)
Q Consensus 125 ~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~ 155 (166)
....|..++....+.+.. .|+.|..|-...
T Consensus 178 ~~~~v~~i~~G~~hs~al-~~G~v~~wG~n~ 207 (282)
T 3qhy_B 178 AQSGVDDVAGGIFHSLAL-KDGKVIAWGDNR 207 (282)
T ss_dssp GGSSEEEEEECSSEEEEE-ETTEEEEEECCT
T ss_pred cCCCeEEEEecCCEEEEE-ECCeEEEEECCC
Confidence 134677777766544444 688888886543
No 335
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=71.65 E-value=30 Score=26.17 Aligned_cols=116 Identities=8% Similarity=-0.020 Sum_probs=62.9
Q ss_pred eEEEEe--cCcEEEEEec--CCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373 47 ITVLEC--VSNRVITGSQ--DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMYS 121 (166)
Q Consensus 47 i~~~~~--~~~~l~~~~~--d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~~ 121 (166)
...|++ .+..|+.... .+.|...++................+.++++++ ++.+++-...+.|...|+........
T Consensus 129 P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~ 208 (619)
T 3s94_A 129 PRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAV 208 (619)
T ss_dssp CCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC--
T ss_pred CceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEE
Confidence 445666 3344444442 356666666532221111223345789999986 55555556677899998864433222
Q ss_pred eecccccEEEEEEcCCeEEEee-cCCcEEEEECCcccceeee
Q psy16373 122 IQAHDGCIHALTYSDSYVISLG-QDERLCVWDRFQGHLLSTI 162 (166)
Q Consensus 122 ~~~~~~~v~~i~~~~~~l~~~~-~d~~i~~wd~~~~~~~~~~ 162 (166)
..+.-.....+++.++.++.+. ..+.|...|..+++....+
T Consensus 209 ~~~~~~~P~gi~~~~~~ly~td~~~~~V~~~d~~tg~~~~~i 250 (619)
T 3s94_A 209 VKGSLPHPFALTLFEDILYWTDWSTHSILACNKYTGEGLREI 250 (619)
T ss_dssp -------CCCEEESSSEEEEECTTTCSEEEEESSSCCCCEEC
T ss_pred EeCCCCCceEEEEeCCEEEEecCCCCEEEEEECCCCcccEEE
Confidence 2211112245677776655554 5678999998887765443
No 336
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=71.18 E-value=29 Score=25.65 Aligned_cols=107 Identities=9% Similarity=-0.021 Sum_probs=60.5
Q ss_pred eEEEEecC---cEEEEEe-cCCeEEEEEcccccceehhcC---CCCceEEEEE-------cCCCCEEEEecCCC------
Q psy16373 47 ITVLECVS---NRVITGS-QDHTLKVYKLEDQQLLFTLHG---HCGPITTLFI-------DGVSMMSGSGSQDG------ 106 (166)
Q Consensus 47 i~~~~~~~---~~l~~~~-~d~~v~v~~~~~~~~~~~~~~---~~~~v~~~~~-------~~~~~~~~~~~~d~------ 106 (166)
...|++++ ..|+.+. ..+.|++.|++++........ .......++| ++++..+..+...+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 45667742 3444444 447788899887655433222 1235789999 99988555554433
Q ss_pred -cEEEEeCcC-Ceee-----EEeecccccEEEEEEcC--CeEEEe-ecCCcEEEEECC
Q psy16373 107 -LLCVWDTVT-GACM-----YSIQAHDGCIHALTYSD--SYVISL-GQDERLCVWDRF 154 (166)
Q Consensus 107 -~v~~~d~~~-~~~~-----~~~~~~~~~v~~i~~~~--~~l~~~-~~d~~i~~wd~~ 154 (166)
.+.+++... +... ..+... .....++.+| ..|+.+ -.++.|..+|+.
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred ceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 255665333 1211 122211 2234677787 355544 456779999987
No 337
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=70.80 E-value=22 Score=24.24 Aligned_cols=52 Identities=10% Similarity=0.063 Sum_probs=28.2
Q ss_pred ecCcEEEEEec-C---------CeEEEEEcccccce--ehhc-CCCCceEEEEEcCCCCEEEEecCC
Q psy16373 52 CVSNRVITGSQ-D---------HTLKVYKLEDQQLL--FTLH-GHCGPITTLFIDGVSMMSGSGSQD 105 (166)
Q Consensus 52 ~~~~~l~~~~~-d---------~~v~v~~~~~~~~~--~~~~-~~~~~v~~~~~~~~~~~~~~~~~d 105 (166)
.++.+++.|+. + ..+.+||..+.+.. ..+. ........+. .++..++.|+.+
T Consensus 64 ~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~ 128 (357)
T 2uvk_A 64 IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV--HNGKAYVTGGVN 128 (357)
T ss_dssp ETTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE--ETTEEEEEECCC
T ss_pred ECCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE--ECCEEEEEeCcC
Confidence 37777777765 2 46888998876432 2222 1111122222 356777777754
No 338
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=70.31 E-value=33 Score=26.05 Aligned_cols=110 Identities=9% Similarity=-0.061 Sum_probs=65.4
Q ss_pred CceEEEEe--cCcE-EEEEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeE
Q psy16373 45 QPITVLEC--VSNR-VITGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMY 120 (166)
Q Consensus 45 ~~i~~~~~--~~~~-l~~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~ 120 (166)
.....++| .++. +++-..++.|..+++........+.........+++++. ++.+++-...+.|.+.++.......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 34677888 3444 445556788998888754332222222245678888865 5566666667889999986443222
Q ss_pred EeecccccEEEEEEcC--CeEEEeec--CCcEEEEECC
Q psy16373 121 SIQAHDGCIHALTYSD--SYVISLGQ--DERLCVWDRF 154 (166)
Q Consensus 121 ~~~~~~~~v~~i~~~~--~~l~~~~~--d~~i~~wd~~ 154 (166)
.+...-.....++++| ..|+.... .+.|...++.
T Consensus 117 l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~d 154 (628)
T 4a0p_A 117 LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMD 154 (628)
T ss_dssp EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCC
Confidence 2222223457888887 46665542 4566666653
No 339
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=70.11 E-value=35 Score=26.26 Aligned_cols=110 Identities=12% Similarity=0.078 Sum_probs=65.2
Q ss_pred CCceEEEEe-cCcEEEEEecCCeEEEEEcccccceehh-cCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373 44 HQPITVLEC-VSNRVITGSQDHTLKVYKLEDQQLLFTL-HGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYS 121 (166)
Q Consensus 44 ~~~i~~~~~-~~~~l~~~~~d~~v~v~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~ 121 (166)
...|.++.- ....|..|..+| +..||-.+.+..... ......|.++....++...+ ++.+| +..+|..+.+....
T Consensus 21 ~n~V~~I~qD~~G~lWigT~~G-L~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gT~~G-l~~yd~~~~~f~~~ 97 (758)
T 3ott_A 21 ASVVSCFLQDSEGLIWIGSNKG-LFSYDGYSTQQHFTYGENNNTRIYCGVIIDNTYLYM-GTDNG-ILVYNYRADRYEQP 97 (758)
T ss_dssp CCCEEEEEECTTSCEEEEESSC-EEEECSSCEEECSCTTSTTSSCEEEEEEETTTEEEE-EETTE-EEEEETTTTEECCC
T ss_pred cceEEEEEECCCCCEEEEECCC-ccccCCCceEEEEccCCCCCceEEEEEEcCCCcEEE-EeCCC-eEEEeCCCCEEECc
Confidence 356889988 556777777766 556775432221111 11235688888777765554 44555 77899876643221
Q ss_pred eecccccEEEEEEcCCeEEEeecCCcEEEEECCccc
Q psy16373 122 IQAHDGCIHALTYSDSYVISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 122 ~~~~~~~v~~i~~~~~~l~~~~~d~~i~~wd~~~~~ 157 (166)
.......|.++....+.|..++.+ .|..+|..+++
T Consensus 98 ~~~~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~~ 132 (758)
T 3ott_A 98 ETDFPTDVRTMALQGDTLWLGALN-GLYTYQLQSRK 132 (758)
T ss_dssp SCCCCSCEEEEEEETTEEEEEETT-EEEEEETTTCC
T ss_pred ccCCCceEEEEEecCCcEEEEcCC-cceeEeCCCCe
Confidence 111123466665556677777766 67888876544
No 340
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=68.95 E-value=36 Score=29.20 Aligned_cols=87 Identities=8% Similarity=0.043 Sum_probs=57.2
Q ss_pred CCeEEEEEcccccceehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcCCeeeEEeecccccEEEEEEc-CCeEEE
Q psy16373 63 DHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGACMYSIQAHDGCIHALTYS-DSYVIS 141 (166)
Q Consensus 63 d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~i~~~-~~~l~~ 141 (166)
...|.+.|+.++..+.+. .-..-+.-.+|..+.++.-. ..++.++|+.+...+.++.- ..+|.--.|- ++.|..
T Consensus 47 ~~~vvIidl~~~~~~~rr---pi~AdsAIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~~l~l 121 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRR---PISADSAIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNTVAL 121 (1630)
T ss_pred CceEEEEECCCCCCcccc---cccchhhccCCCcceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCCeeEE
Confidence 347888999875433111 01112344678777776654 67999999999888887764 4566666774 455555
Q ss_pred eecCCcEEEEECCc
Q psy16373 142 LGQDERLCVWDRFQ 155 (166)
Q Consensus 142 ~~~d~~i~~wd~~~ 155 (166)
.+ +..|+.|++..
T Consensus 122 VT-~~aVyHW~~~~ 134 (1630)
T 1xi4_A 122 VT-DNAVYHWSMEG 134 (1630)
T ss_pred Ec-CCeEEEeccCC
Confidence 54 46799999953
No 341
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=68.74 E-value=26 Score=24.20 Aligned_cols=68 Identities=10% Similarity=0.064 Sum_probs=44.2
Q ss_pred CceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee--eEEee---cccccEEEEEEcCC-----eEEEeecC------CcE
Q psy16373 85 GPITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC--MYSIQ---AHDGCIHALTYSDS-----YVISLGQD------ERL 148 (166)
Q Consensus 85 ~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~--~~~~~---~~~~~v~~i~~~~~-----~l~~~~~d------~~i 148 (166)
.....+++.|+++.+++ ..++.|.+++ +++. +..+. ........++++|+ .|+.+... ..|
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 34679999999986665 4568999988 4432 22221 11345788999986 66665542 567
Q ss_pred EEEECCc
Q psy16373 149 CVWDRFQ 155 (166)
Q Consensus 149 ~~wd~~~ 155 (166)
..++...
T Consensus 108 ~r~~~~~ 114 (352)
T 2ism_A 108 VRLRHLG 114 (352)
T ss_dssp EEEEECS
T ss_pred EEEEeCC
Confidence 7777654
No 342
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=64.85 E-value=37 Score=24.56 Aligned_cols=51 Identities=6% Similarity=0.124 Sum_probs=34.0
Q ss_pred ceEEEEEcCCCCEEEEecCCCcEEEEeCcCCee--eEEeec------ccccEEEEEEcC
Q psy16373 86 PITTLFIDGVSMMSGSGSQDGLLCVWDTVTGAC--MYSIQA------HDGCIHALTYSD 136 (166)
Q Consensus 86 ~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~~--~~~~~~------~~~~v~~i~~~~ 136 (166)
....+++.|+++++++-...+.|++++..++.. +..+.. .......|+|+|
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~P 86 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHP 86 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECT
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECC
Confidence 467999999999887755445788887655533 222221 234667899997
No 343
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=63.08 E-value=47 Score=25.21 Aligned_cols=116 Identities=13% Similarity=0.011 Sum_probs=70.1
Q ss_pred ceEEEEec--CcEEEEEe--cCCeEEEEEcccccceehhcCCCCceEEEEEcCCC-CEEEEecCCCcEEEEeCcCCeeeE
Q psy16373 46 PITVLECV--SNRVITGS--QDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGVS-MMSGSGSQDGLLCVWDTVTGACMY 120 (166)
Q Consensus 46 ~i~~~~~~--~~~l~~~~--~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~~~~~d~~v~~~d~~~~~~~~ 120 (166)
....++++ ...|+... ..+.|...++..... ..+.........+++++++ ..+++-...+.|...|+..... .
T Consensus 124 ~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~-~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~ 201 (628)
T 4a0p_A 124 SPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSER-TTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-E 201 (628)
T ss_dssp CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-E
T ss_pred CcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCce-EEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-E
Confidence 44677773 34555544 246777777754332 2222234567899999874 4555556677899999865433 2
Q ss_pred EeecccccEEEEEEcCCeEEEeec-CCcEEEEECCcccceeeee
Q psy16373 121 SIQAHDGCIHALTYSDSYVISLGQ-DERLCVWDRFQGHLLSTIQ 163 (166)
Q Consensus 121 ~~~~~~~~v~~i~~~~~~l~~~~~-d~~i~~wd~~~~~~~~~~~ 163 (166)
.+...-.....+++..+.++.+.. .+.|...|..+++....+.
T Consensus 202 v~~~~l~~P~glav~~~~ly~tD~~~~~I~~~dk~tg~~~~~l~ 245 (628)
T 4a0p_A 202 VIADDLPHPFGLTQYQDYIYWTDWSRRSIERANKTSGQNRTIIQ 245 (628)
T ss_dssp EEEECCSCEEEEEEETTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred EeeccCCCceEEEEECCEEEEecCCCCEEEEEECCCCCceEEEe
Confidence 232222334567777776666654 6789889987877655443
No 344
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=62.85 E-value=44 Score=24.70 Aligned_cols=68 Identities=12% Similarity=0.048 Sum_probs=43.8
Q ss_pred ceEEEEEcCC-CCEEEEecCCCcEEEEeCc-------CCee-----------eEE-ee-cccccEEEEEEcC--CeEEEe
Q psy16373 86 PITTLFIDGV-SMMSGSGSQDGLLCVWDTV-------TGAC-----------MYS-IQ-AHDGCIHALTYSD--SYVISL 142 (166)
Q Consensus 86 ~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~-------~~~~-----------~~~-~~-~~~~~v~~i~~~~--~~l~~~ 142 (166)
....++++|+ +.++++...++.|..+|+. ++.. ... +. +.......++|+| +.|+.+
T Consensus 248 ~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYva 327 (496)
T 3kya_A 248 QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFG 327 (496)
T ss_dssp CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEE
T ss_pred CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEE
Confidence 3467788994 6777777788899999987 4443 112 11 1223457899998 445555
Q ss_pred e-cCCcEEEEEC
Q psy16373 143 G-QDERLCVWDR 153 (166)
Q Consensus 143 ~-~d~~i~~wd~ 153 (166)
. ..+.|+.++.
T Consensus 328 D~~~h~I~kid~ 339 (496)
T 3kya_A 328 VINNHYFMRSDY 339 (496)
T ss_dssp ETTTTEEEEEEE
T ss_pred eCCCCEEEEEec
Confidence 4 4677888554
No 345
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=58.01 E-value=62 Score=24.89 Aligned_cols=109 Identities=7% Similarity=0.040 Sum_probs=58.7
Q ss_pred EEEEe--cCcEEEEEecC------CeEEEEEcccccc--eehhcCCCCceEEEEEcCCCCEEEEecCCC--cEEEEeCcC
Q psy16373 48 TVLEC--VSNRVITGSQD------HTLKVYKLEDQQL--LFTLHGHCGPITTLFIDGVSMMSGSGSQDG--LLCVWDTVT 115 (166)
Q Consensus 48 ~~~~~--~~~~l~~~~~d------~~v~v~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~--~v~~~d~~~ 115 (166)
.+... ++..++.|+.+ ..+.+||..+.+. +..+...... .+.+.-.++..++.|+.++ .+.+||..+
T Consensus 444 s~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t 522 (695)
T 2zwa_A 444 TFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGPAMLLYNVTE 522 (695)
T ss_dssp EEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSCSEEEEETTT
T ss_pred EEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCCCEEEEECCC
Confidence 34444 56666677643 3577888887533 2222211111 2233323677888887654 689999887
Q ss_pred CeeeEE-----eecccccEEEEEEcC---CeEEEeec--C-----CcEEEEECCccc
Q psy16373 116 GACMYS-----IQAHDGCIHALTYSD---SYVISLGQ--D-----ERLCVWDRFQGH 157 (166)
Q Consensus 116 ~~~~~~-----~~~~~~~v~~i~~~~---~~l~~~~~--d-----~~i~~wd~~~~~ 157 (166)
...... +........++.+.. ..++.|+. + ..+..||+.+.+
T Consensus 523 ~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 523 EIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 643221 111122223345553 35566654 2 458899988776
No 346
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=56.77 E-value=62 Score=24.52 Aligned_cols=107 Identities=7% Similarity=-0.040 Sum_probs=63.6
Q ss_pred ceEEEEec--CcEEE-EEecCCeEEEEEcccccceehhcCCCCceEEEEEcCC-CCEEEEecCCCcEEEEeCcCCeeeEE
Q psy16373 46 PITVLECV--SNRVI-TGSQDHTLKVYKLEDQQLLFTLHGHCGPITTLFIDGV-SMMSGSGSQDGLLCVWDTVTGACMYS 121 (166)
Q Consensus 46 ~i~~~~~~--~~~l~-~~~~d~~v~v~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~~~d~~v~~~d~~~~~~~~~ 121 (166)
.+..++++ ++.|+ +-...+.|..++.........+.........+++... ++.+.+-...+.|.+.++.... ...
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~-~~~ 428 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM-RKI 428 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEE
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe-EEE
Confidence 45678882 44444 4445788888888754332222222345678899864 6666776777899999886443 223
Q ss_pred ee-cccccEEEEEEcC--CeEEEeec--CCcEEEEEC
Q psy16373 122 IQ-AHDGCIHALTYSD--SYVISLGQ--DERLCVWDR 153 (166)
Q Consensus 122 ~~-~~~~~v~~i~~~~--~~l~~~~~--d~~i~~wd~ 153 (166)
+. ..-.....|+++| +.|+.+.. ...|...++
T Consensus 429 l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~ 465 (619)
T 3s94_A 429 LISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAAL 465 (619)
T ss_dssp EECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred EEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEcc
Confidence 32 2224567888887 46655543 245555554
No 347
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=54.64 E-value=52 Score=23.02 Aligned_cols=109 Identities=11% Similarity=0.021 Sum_probs=65.2
Q ss_pred ceEEEEecCcEEEEEecCCeEEEEEcccccce-----------ehhc-CCCCceEEEEEcCCCCEEEEecCCCcEEEEeC
Q psy16373 46 PITVLECVSNRVITGSQDHTLKVYKLEDQQLL-----------FTLH-GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT 113 (166)
Q Consensus 46 ~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~-----------~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~ 113 (166)
.+..++......+.-..||.|..|-....-.+ ..+. .....+..+++.......+.-..||.|+.|-.
T Consensus 54 ~i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~ 133 (389)
T 3kci_A 54 RPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGE 133 (389)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEEC
T ss_pred ceEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeC
Confidence 45566666666666678999999975432111 0111 11223455666555566666678999999954
Q ss_pred cCC-----------eeeEEeecc-cccEEEEEEcCCeEEEeecCCcEEEEECC
Q psy16373 114 VTG-----------ACMYSIQAH-DGCIHALTYSDSYVISLGQDERLCVWDRF 154 (166)
Q Consensus 114 ~~~-----------~~~~~~~~~-~~~v~~i~~~~~~l~~~~~d~~i~~wd~~ 154 (166)
... .....+... ...|..++....+.+....||.|+.|-..
T Consensus 134 n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n 186 (389)
T 3kci_A 134 AEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKG 186 (389)
T ss_dssp CGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTSCEEEEECC
T ss_pred CCCCcCCCCCCccCcCCeEecccCCCeEEEEEeCcCeEEEEeCCCeEEEeCCC
Confidence 321 111112211 23677788777777778889999999653
No 348
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=49.53 E-value=61 Score=22.31 Aligned_cols=98 Identities=5% Similarity=-0.002 Sum_probs=52.4
Q ss_pred CceEEEEe--cCcEEEEEecCCeEEEEEcccccceehhc---CCCCceEEEEEcCC----CCEEEEecCC-----CcEEE
Q psy16373 45 QPITVLEC--VSNRVITGSQDHTLKVYKLEDQQLLFTLH---GHCGPITTLFIDGV----SMMSGSGSQD-----GLLCV 110 (166)
Q Consensus 45 ~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~~~~~---~~~~~v~~~~~~~~----~~~~~~~~~d-----~~v~~ 110 (166)
..-..+++ ++. ++.+..++.|.+++-.+.+.+..+. ........++++|+ +..+++-... ..|..
T Consensus 31 ~~P~~ia~~pdG~-l~V~e~~g~I~~i~~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 31 EVPWALAFLPDGG-MLIAERPGRIRLFREGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp SCEEEEEECTTSC-EEEEETTTEEEEEETTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred CCceEEEEcCCCe-EEEEeCCCeEEEEECCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 34568888 555 5555667999999821112222111 12346789999998 4444443322 56777
Q ss_pred EeCcCCe-----eeEE-eec---ccccEEEEEEcCC-eEEEee
Q psy16373 111 WDTVTGA-----CMYS-IQA---HDGCIHALTYSDS-YVISLG 143 (166)
Q Consensus 111 ~d~~~~~-----~~~~-~~~---~~~~v~~i~~~~~-~l~~~~ 143 (166)
++..... .+.. +.. .......++|.|+ .|+.+.
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 7765431 1211 221 0112357888883 454443
No 349
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=46.93 E-value=68 Score=22.10 Aligned_cols=108 Identities=10% Similarity=-0.005 Sum_probs=64.3
Q ss_pred CceEEEEe-----cCcEEEEEecCCeEEEEEcccccce-------ehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEe
Q psy16373 45 QPITVLEC-----VSNRVITGSQDHTLKVYKLEDQQLL-------FTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWD 112 (166)
Q Consensus 45 ~~i~~~~~-----~~~~l~~~~~d~~v~v~~~~~~~~~-------~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d 112 (166)
..|.++.. +...++..+.+|.++--.+...... ..++. .+.+..+........++..+..|.+..+.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 44555544 3678999999999999887653221 12332 34444444444455677778888887776
Q ss_pred Cc--CC---------eeeEEeecccccEEEEEE-cC-CeEEEeecCCcEEEEECC
Q psy16373 113 TV--TG---------ACMYSIQAHDGCIHALTY-SD-SYVISLGQDERLCVWDRF 154 (166)
Q Consensus 113 ~~--~~---------~~~~~~~~~~~~v~~i~~-~~-~~l~~~~~d~~i~~wd~~ 154 (166)
.. .- ...-.+.. ...|.++.. .+ ..++.++..|.++.-.+.
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~ 227 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRFNI-DDRLLSLNVVREGTYLLVATSGGYAKRTAIE 227 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCCCT-TCCEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred CcccccCcCCcCCCCeeeecCCC-CCEEEEEEEECCCCEEEEEeCCCcEEEEEHH
Confidence 65 21 11122222 334555444 33 488888999988877653
No 350
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=45.50 E-value=75 Score=22.21 Aligned_cols=57 Identities=5% Similarity=-0.065 Sum_probs=34.7
Q ss_pred CceEEEEEcCCCCEEEEe-cCCCcEEEEeCcC-Cee--eEEeecccccEEEEEEcC--CeEEEe
Q psy16373 85 GPITTLFIDGVSMMSGSG-SQDGLLCVWDTVT-GAC--MYSIQAHDGCIHALTYSD--SYVISL 142 (166)
Q Consensus 85 ~~v~~~~~~~~~~~~~~~-~~d~~v~~~d~~~-~~~--~~~~~~~~~~v~~i~~~~--~~l~~~ 142 (166)
...+.++|+|+++.+..+ +..+.|..|++.. ++. ...+. ..+..-.++.++ ..++++
T Consensus 221 ~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva 283 (355)
T 3sre_A 221 DFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVG 283 (355)
T ss_dssp SSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEE
T ss_pred cccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEE
Confidence 456899999998766554 5567999999863 322 22232 234445667765 344443
No 351
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=42.09 E-value=1.1e+02 Score=22.97 Aligned_cols=65 Identities=14% Similarity=0.085 Sum_probs=41.0
Q ss_pred ceEEEEe----cCcEEEEEecCCeEEEEEccccc----ceehhc--CCCCceE-EEEEcCCCCEEEEecCCCcEEE
Q psy16373 46 PITVLEC----VSNRVITGSQDHTLKVYKLEDQQ----LLFTLH--GHCGPIT-TLFIDGVSMMSGSGSQDGLLCV 110 (166)
Q Consensus 46 ~i~~~~~----~~~~l~~~~~d~~v~v~~~~~~~----~~~~~~--~~~~~v~-~~~~~~~~~~~~~~~~d~~v~~ 110 (166)
..++++. +-..++.|..+|.|.-..+.... .+.++. ....+|. .+.++++...+..++.++.+++
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 4666666 23457888999998866554321 222222 2245675 8889988888888877665544
No 352
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=38.30 E-value=1.2e+02 Score=22.42 Aligned_cols=65 Identities=14% Similarity=0.065 Sum_probs=41.4
Q ss_pred ceEEEEe------cCc--EEEEEecCCeEEEEEccccc--------ceehhcC--CCCceEEEEEcCCCCEEEEecCCCc
Q psy16373 46 PITVLEC------VSN--RVITGSQDHTLKVYKLEDQQ--------LLFTLHG--HCGPITTLFIDGVSMMSGSGSQDGL 107 (166)
Q Consensus 46 ~i~~~~~------~~~--~l~~~~~d~~v~v~~~~~~~--------~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~d~~ 107 (166)
..++|+. +++ .++.|..+|.|.-.-+.... .+.++.. ...+|..+.++++...+..++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 4677766 143 47788889988755443211 2222332 3468899999999888888887776
Q ss_pred EEE
Q psy16373 108 LCV 110 (166)
Q Consensus 108 v~~ 110 (166)
+++
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
No 353
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=32.77 E-value=1.2e+02 Score=20.89 Aligned_cols=70 Identities=7% Similarity=-0.123 Sum_probs=41.3
Q ss_pred CCceEEEEe--cCcEEEEEecCCeEEEEEccccc-ceehhc---CCCCceEEEEEcCC----CCEEEEecC---C----C
Q psy16373 44 HQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQ-LLFTLH---GHCGPITTLFIDGV----SMMSGSGSQ---D----G 106 (166)
Q Consensus 44 ~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~-~~~~~~---~~~~~v~~~~~~~~----~~~~~~~~~---d----~ 106 (166)
...-..+++ +++ |+.+..++.|.+++. +++ .+..+. ........++++|+ +..+++-.. + .
T Consensus 28 l~~P~~ia~~pdG~-l~V~e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR-YLVTERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTE-EEEEETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCe-EEEEeCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 344578888 455 666667799999873 343 222211 12345789999997 444444332 2 4
Q ss_pred cEEEEeCcC
Q psy16373 107 LLCVWDTVT 115 (166)
Q Consensus 107 ~v~~~d~~~ 115 (166)
.|..++...
T Consensus 106 ~v~r~~~~~ 114 (354)
T 3a9g_A 106 RVIRGRLDG 114 (354)
T ss_dssp EEEEEEECS
T ss_pred EEEEEEECC
Confidence 566676654
No 354
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=32.21 E-value=1.3e+02 Score=21.01 Aligned_cols=109 Identities=6% Similarity=0.036 Sum_probs=64.2
Q ss_pred ceEEEEecCcEEEEEecCCeEEEEEcccccce-----------ehhc-CCCCceEEEEEcCCCCEEEEecCCCcEEEEeC
Q psy16373 46 PITVLECVSNRVITGSQDHTLKVYKLEDQQLL-----------FTLH-GHCGPITTLFIDGVSMMSGSGSQDGLLCVWDT 113 (166)
Q Consensus 46 ~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~-----------~~~~-~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~ 113 (166)
.|..++......+.-..+|.|..|-....-.+ ..+. .....|..++........+.-..||.+..|-.
T Consensus 160 ~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~ 239 (389)
T 3kci_A 160 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGD 239 (389)
T ss_dssp CEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEEC
T ss_pred eEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeC
Confidence 67777776666666678999999976432110 0011 11234666665432344555578899999954
Q ss_pred cCC-----------eeeEEeecc-cccEEEEEEcCCeEEEeecCCcEEEEECC
Q psy16373 114 VTG-----------ACMYSIQAH-DGCIHALTYSDSYVISLGQDERLCVWDRF 154 (166)
Q Consensus 114 ~~~-----------~~~~~~~~~-~~~v~~i~~~~~~l~~~~~d~~i~~wd~~ 154 (166)
... .....+... ...|..++....+.+....|+.|..|-..
T Consensus 240 n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n 292 (389)
T 3kci_A 240 GDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG 292 (389)
T ss_dssp CGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEEEEEETTSCEEEEECC
T ss_pred CCCCCCCCCCCCCccccEEecccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCC
Confidence 311 111112211 22577777777777777889999999754
No 355
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=29.86 E-value=1.6e+02 Score=21.29 Aligned_cols=51 Identities=8% Similarity=-0.024 Sum_probs=30.5
Q ss_pred CceEEEEe--cCcEEEEEecCCeEEEEEcccccc--eehhcC------CCCceEEEEEcCC
Q psy16373 45 QPITVLEC--VSNRVITGSQDHTLKVYKLEDQQL--LFTLHG------HCGPITTLFIDGV 95 (166)
Q Consensus 45 ~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~--~~~~~~------~~~~v~~~~~~~~ 95 (166)
..-..|+| +++++++-...+.|++++..+++. +..+.. .......++++|+
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 34568888 666665544335788887654432 222211 2355779999994
No 356
>2z5e_A Proteasome assembling chaperone 3; beta sandwich, homodimer; 2.00A {Homo sapiens}
Probab=29.68 E-value=61 Score=18.81 Aligned_cols=30 Identities=7% Similarity=0.087 Sum_probs=19.7
Q ss_pred eecccccEEEEEEcCCeEEEeecCCcEEEE
Q psy16373 122 IQAHDGCIHALTYSDSYVISLGQDERLCVW 151 (166)
Q Consensus 122 ~~~~~~~v~~i~~~~~~l~~~~~d~~i~~w 151 (166)
+.+....+....|+...+++.+..|++-.|
T Consensus 16 I~Gv~Tevv~~~FsD~ilV~VTQ~Gk~Gt~ 45 (122)
T 2z5e_A 16 VCGVPTQVVCTAFSSHILVVVTQFGKMGTL 45 (122)
T ss_dssp ETTEEEEEEEEECSSEEEEEEESTTCCCEE
T ss_pred ECCeeeEEEEEecCCEEEEEEEeCCeeeEE
Confidence 444455666677777788888877765443
No 357
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=28.65 E-value=40 Score=18.71 Aligned_cols=18 Identities=22% Similarity=0.268 Sum_probs=11.8
Q ss_pred cEEEEECCcccceeeeee
Q psy16373 147 RLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 147 ~i~~wd~~~~~~~~~~~~ 164 (166)
.|.+||+.+|..+.++-.
T Consensus 18 ~V~IvNvnNG~RfeTYvI 35 (97)
T 1uhe_A 18 KVEIVDVNNGERFSTYVI 35 (97)
T ss_dssp EEEEEETTTCCEEEEECE
T ss_pred EEEEEECCCCceEEEEEE
Confidence 466777777776666543
No 358
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=27.56 E-value=43 Score=18.54 Aligned_cols=19 Identities=32% Similarity=0.464 Sum_probs=12.4
Q ss_pred CcEEEEECCcccceeeeee
Q psy16373 146 ERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 146 ~~i~~wd~~~~~~~~~~~~ 164 (166)
-.|.+||+.+|..+.++-.
T Consensus 18 E~V~IvNvnNG~Rf~TYvI 36 (96)
T 1vc3_B 18 EQVDIYDITNGARLTTYAL 36 (96)
T ss_dssp CEEEEEETTTCCEEEEECE
T ss_pred CEEEEEECCCCceEEEEEE
Confidence 3567777777777666543
No 359
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=26.38 E-value=2.3e+02 Score=21.99 Aligned_cols=55 Identities=15% Similarity=0.126 Sum_probs=35.3
Q ss_pred EEEEEecCCeEEEE-Eccccc-------ceehhc--CCCCceEEEEEcCCCCEEEEecCCCcEEE
Q psy16373 56 RVITGSQDHTLKVY-KLEDQQ-------LLFTLH--GHCGPITTLFIDGVSMMSGSGSQDGLLCV 110 (166)
Q Consensus 56 ~l~~~~~d~~v~v~-~~~~~~-------~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~d~~v~~ 110 (166)
.++.|..+|.|.-. ...... .+.+++ ....+|..+.++++...+..++.++.+++
T Consensus 431 VlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 431 VMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 57788899988633 222111 122222 24567889999999888888888876655
No 360
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=26.17 E-value=47 Score=18.63 Aligned_cols=18 Identities=17% Similarity=0.207 Sum_probs=11.8
Q ss_pred cEEEEECCcccceeeeee
Q psy16373 147 RLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 147 ~i~~wd~~~~~~~~~~~~ 164 (166)
.|.+||+.+|..+.++-.
T Consensus 19 ~V~I~NvnNG~Rf~TYvI 36 (102)
T 3plx_B 19 KVQVVNVNNGARFETYTI 36 (102)
T ss_dssp EEEEEETTTCCEEEEECE
T ss_pred EEEEEECCCCcEEEEEEE
Confidence 566777777776666543
No 361
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=25.44 E-value=1.9e+02 Score=20.84 Aligned_cols=109 Identities=13% Similarity=0.162 Sum_probs=64.0
Q ss_pred CCceEEEEecCcEEEEEecCCeEEEEEccccccee----------------------------------hhcC-------
Q psy16373 44 HQPITVLECVSNRVITGSQDHTLKVYKLEDQQLLF----------------------------------TLHG------- 82 (166)
Q Consensus 44 ~~~i~~~~~~~~~l~~~~~d~~v~v~~~~~~~~~~----------------------------------~~~~------- 82 (166)
...|..++......+.-..||.|..|-....-.+. .+..
T Consensus 66 ~~~i~~va~G~~Ht~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~l~~~~ 145 (473)
T 3of7_A 66 EAKIISFAVGGMHTLALDEESNVWSWGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLA 145 (473)
T ss_dssp TTCEEEEEECSSEEEEEETTCCEEEEECCTTSTTCSCCC---------------------CCHHHHSCEECCGGGCHHHH
T ss_pred CCCEEEEEeCCCeEEEEecCCeEEEeECCCCCCCCCCCcccccccccccccccCccccccccccccCceecccccCCccc
Confidence 34688888866666666789999999664321110 0000
Q ss_pred CCCceEEEEEcCCCCEEEEecCCCcEEEEeCc---CCe------------eeEEeecc-cccEEEEEEcCCeEEEeecCC
Q psy16373 83 HCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV---TGA------------CMYSIQAH-DGCIHALTYSDSYVISLGQDE 146 (166)
Q Consensus 83 ~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~---~~~------------~~~~~~~~-~~~v~~i~~~~~~l~~~~~d~ 146 (166)
....|..++... ...+.-..+|.|+.|-.. .+. ....+... ...|..|+....+.+....+|
T Consensus 146 ~~~~i~~va~G~--~hs~alt~~G~vy~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~G~~hs~alt~~G 223 (473)
T 3of7_A 146 EGHKVVQLAATD--NMSCALFSNGEVYAWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEG 223 (473)
T ss_dssp TTCCEEEEEECS--SEEEEEETTSCEEEEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEECSSEEEEEETTS
T ss_pred CCCcEEEEEccC--CEEEEEeCCCeEEEeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEecCCeEEEEeCCC
Confidence 123466665543 333444678999999741 111 01111111 234778887778888888899
Q ss_pred cEEEEECC
Q psy16373 147 RLCVWDRF 154 (166)
Q Consensus 147 ~i~~wd~~ 154 (166)
.|..|-..
T Consensus 224 ~v~~wG~n 231 (473)
T 3of7_A 224 MVFAWGNG 231 (473)
T ss_dssp CEEEEECC
T ss_pred eEEEEeCC
Confidence 99999654
No 362
>3oug_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta barrel; HET: MSE; 1.55A {Francisella tularensis subsp} SCOP: b.52.2.0
Probab=25.29 E-value=57 Score=18.68 Aligned_cols=19 Identities=26% Similarity=0.286 Sum_probs=12.5
Q ss_pred CcEEEEECCcccceeeeee
Q psy16373 146 ERLCVWDRFQGHLLSTIQL 164 (166)
Q Consensus 146 ~~i~~wd~~~~~~~~~~~~ 164 (166)
-.|.+||+.+|..+.++-.
T Consensus 45 E~V~I~NvnNG~Rf~TYvI 63 (114)
T 3oug_A 45 EKVQVVNLNNGERLETYVI 63 (114)
T ss_dssp BEEEEEETTTCCEEEEEEE
T ss_pred CEEEEEECCCCceEEEEEE
Confidence 3567777777777666544
No 363
>3mwp_A Nucleoprotein; structural genomics, scottish structural PROT facility, SSPF, nuclear protein; 1.79A {Lassa virus josiah} PDB: 3mwt_A 3mx2_A* 3mx5_A* 3r3l_A 3t5q_A 3t5n_A
Probab=25.04 E-value=21 Score=25.92 Aligned_cols=17 Identities=35% Similarity=0.608 Sum_probs=8.2
Q ss_pred eecCCcEEEEECCcccc
Q psy16373 142 LGQDERLCVWDRFQGHL 158 (166)
Q Consensus 142 ~~~d~~i~~wd~~~~~~ 158 (166)
+..+|.|++||+++...
T Consensus 163 ~~~~GVVrvWDVkd~sl 179 (577)
T 3mwp_A 163 AGRDGVVRVWDVKNAEL 179 (577)
T ss_dssp ---CCEECSEECSCGGG
T ss_pred CCCCCeEEEEecCCHHH
Confidence 34456666666665443
No 364
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=24.45 E-value=2.4e+02 Score=21.53 Aligned_cols=57 Identities=14% Similarity=0.029 Sum_probs=35.6
Q ss_pred cEEEEEecCCeEEEEEccccc------ceehhc--CCCCceEEEEEcCCCCEEEEecCCCcEEEE
Q psy16373 55 NRVITGSQDHTLKVYKLEDQQ------LLFTLH--GHCGPITTLFIDGVSMMSGSGSQDGLLCVW 111 (166)
Q Consensus 55 ~~l~~~~~d~~v~v~~~~~~~------~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~ 111 (166)
..++.|..+|.|.-.-+.... .+.++. ....+|..+.++++...+..++.++.+++-
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEcc
Confidence 357788889988754443211 112222 234678899999887788777766655543
No 365
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=23.51 E-value=1.5e+02 Score=18.78 Aligned_cols=30 Identities=10% Similarity=0.257 Sum_probs=20.3
Q ss_pred cEEEEEEcC---CeEEEeecCCcEEEEECCccc
Q psy16373 128 CIHALTYSD---SYVISLGQDERLCVWDRFQGH 157 (166)
Q Consensus 128 ~v~~i~~~~---~~l~~~~~d~~i~~wd~~~~~ 157 (166)
-+.++.|.+ .-+.+.+.++++.++|..-|+
T Consensus 120 hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 120 HLLSLRFANVQGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp EEEEEEETTTEEEEEEEEEETTEEEEEETTTEE
T ss_pred eEEEEEecCCCceeEEeccCCCeEEEeCCCCce
Confidence 344455544 245666778999999997765
No 366
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=22.67 E-value=1.9e+02 Score=19.83 Aligned_cols=56 Identities=9% Similarity=-0.019 Sum_probs=32.9
Q ss_pred ceEEEEe--cCcEEEEEecCCeEEEEEccccc--ceehh----cCCCCceEEEEEcCC----CCEEEE
Q psy16373 46 PITVLEC--VSNRVITGSQDHTLKVYKLEDQQ--LLFTL----HGHCGPITTLFIDGV----SMMSGS 101 (166)
Q Consensus 46 ~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~--~~~~~----~~~~~~v~~~~~~~~----~~~~~~ 101 (166)
.-..|++ +++.++.+...+.|++++..... .+..+ .........++++|+ +..+++
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 4567888 66625555678999999854221 11111 112345689999995 444444
No 367
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=22.41 E-value=2.7e+02 Score=21.55 Aligned_cols=27 Identities=15% Similarity=0.245 Sum_probs=20.2
Q ss_pred ccCCceEEEEe--cCcEEEEEecCCeEEE
Q psy16373 42 AHHQPITVLEC--VSNRVITGSQDHTLKV 68 (166)
Q Consensus 42 ~~~~~i~~~~~--~~~~l~~~~~d~~v~v 68 (166)
....+|..|.+ +.+.|+.++.++.++|
T Consensus 467 ~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 467 REPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp SSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred CCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 34567888888 7788888888776665
No 368
>1pqh_A Aspartate 1-decarboxylase; pyruvoyl dependent decarboxylase, protein SELF-processing; 1.29A {Escherichia coli} SCOP: b.52.2.1 PDB: 1pqf_A 1pt1_A 1pt0_A 1pyq_A 1ppy_A 1pqe_A 1pyu_B 3tm7_B 1aw8_B 1pyu_A 3tm7_A 1aw8_A
Probab=21.92 E-value=69 Score=19.15 Aligned_cols=20 Identities=25% Similarity=0.534 Sum_probs=14.2
Q ss_pred CcEEEEECCcccceeeeeec
Q psy16373 146 ERLCVWDRFQGHLLSTIQLQ 165 (166)
Q Consensus 146 ~~i~~wd~~~~~~~~~~~~~ 165 (166)
-.|.+||+.+|..+.++-..
T Consensus 59 EkV~IvNvnNG~RfeTYvI~ 78 (143)
T 1pqh_A 59 EAIDIWNVTNGKRFSTYAIA 78 (143)
T ss_dssp CEEEEEETTTCCEEEEEEEE
T ss_pred CEEEEEECCCCceEEEEEEE
Confidence 46788888888877766543
No 369
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=21.76 E-value=2.1e+02 Score=19.93 Aligned_cols=76 Identities=8% Similarity=-0.037 Sum_probs=44.1
Q ss_pred eeeccCCceEEEEe--cCcEEEEEecCCeEEEEEcccccc--eehh----cCCCCceEEEEEcCC----CCEEEEe--cC
Q psy16373 39 STRAHHQPITVLEC--VSNRVITGSQDHTLKVYKLEDQQL--LFTL----HGHCGPITTLFIDGV----SMMSGSG--SQ 104 (166)
Q Consensus 39 ~~~~~~~~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~--~~~~----~~~~~~v~~~~~~~~----~~~~~~~--~~ 104 (166)
.+......-..|++ ++.++++-...|.|++++..+++. +..+ .........++++|+ +...++- ..
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~ 105 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSAS 105 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSS
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCC
Confidence 33334455678988 666666654489999998665432 2111 123456789999995 4444432 23
Q ss_pred CCcEEEEeCc
Q psy16373 105 DGLLCVWDTV 114 (166)
Q Consensus 105 d~~v~~~d~~ 114 (166)
+..|.-|...
T Consensus 106 ~~~v~R~~~~ 115 (347)
T 3das_A 106 DNRIVRMLYD 115 (347)
T ss_dssp SEEEEEEEBC
T ss_pred CCEEEEEEeC
Confidence 3455555544
No 370
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=20.82 E-value=2.9e+02 Score=21.28 Aligned_cols=62 Identities=11% Similarity=-0.002 Sum_probs=43.8
Q ss_pred cCcEEEE-EecCCeEEEEEcccccc-------------eehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCcC
Q psy16373 53 VSNRVIT-GSQDHTLKVYKLEDQQL-------------LFTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTVT 115 (166)
Q Consensus 53 ~~~~l~~-~~~d~~v~v~~~~~~~~-------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~~ 115 (166)
+|.+++. |-.+.++.++|++.... ..+.. -.......+|.++|+...+..-|..+..|++..
T Consensus 333 DGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 333 DGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp TSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEETTTTEEEEEEHHH
T ss_pred CCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeeeecceEEEEeccH
Confidence 7777655 45689999999985321 11112 123356778999997777888999999999864
No 371
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=20.82 E-value=1.9e+02 Score=19.19 Aligned_cols=107 Identities=5% Similarity=-0.046 Sum_probs=62.5
Q ss_pred ceEEEEe--cCcEEEEEecCCeEEEEEcccccce---------ehhcCCCCceEEEEEcCCCCEEEEecCCCcEEEEeCc
Q psy16373 46 PITVLEC--VSNRVITGSQDHTLKVYKLEDQQLL---------FTLHGHCGPITTLFIDGVSMMSGSGSQDGLLCVWDTV 114 (166)
Q Consensus 46 ~i~~~~~--~~~~l~~~~~d~~v~v~~~~~~~~~---------~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~v~~~d~~ 114 (166)
.+..+.. ..+.++..+..|.+..+...+-... -.+. ....|..+...++...++..+..|.++...+.
T Consensus 117 ~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 117 EVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp CEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEEETTSCEEEEEGG
T ss_pred EEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHH
Confidence 3444444 5567888889999988877543221 1222 23456665554556678888899999888764
Q ss_pred C-------CeeeEEeecccccEEEEE-EcC-CeEEEeecCCcEEE--EECC
Q psy16373 115 T-------GACMYSIQAHDGCIHALT-YSD-SYVISLGQDERLCV--WDRF 154 (166)
Q Consensus 115 ~-------~~~~~~~~~~~~~v~~i~-~~~-~~l~~~~~d~~i~~--wd~~ 154 (166)
. ++-+..+. ..+.+..+. ..+ +.++..+.+|.+.. ++..
T Consensus 196 e~~~~~R~gkGv~~i~-~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 196 EIPKTNRGVKGTEVSG-TKDTLVDLIPIKEEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp GSCCCCTTCCCEECCC-SSSCEEEEEEESSEEEEEEEETTSCEEEEEEEGG
T ss_pred HcccCCCCCcceEEEc-CCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCHH
Confidence 2 22233332 233444433 333 46777777787766 7654
Done!