Diaphorina citri psyllid: psy16375


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------9
MAMLTQFRKPNGVLPYFIIIVLPYFIIIVGLENILVLTKSIISIPSHLDSKIRIAQGLSKEGWSITKNFFLELTVLTAGLLTFFPVIQI
cccccccccccccccEEEEEEEcEEEEEEEcccEEEEHHHHHcccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHcccccccc
********KPNGVLPYFIIIVLPYFIIIVGLENILVLTKSIISIPSHLDSKIRIAQGLSKEGWSITKNFFLELTVLTAGLLTFFPVIQI
xxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MAMLTQFRKPNGVLPYFIIIVLPYFIIIVGLENILVLTKSIISIPSHLDSKIRIAQGLSKEGWSITKNFFLELTVLTAGLLTFFPVIQI

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Sterol regulatory element-binding protein cleavage-activating protein Escort protein required for cholesterol as well as lipid homeostasis. Regulates export of the SCAP/SREBF complex from the ER upon low cholesterol. Formation of a ternary complex with INSIG at high sterol concentrations leads to masking of an ER-export signal in SCAP and retention of the complex in the ER. Low sterol concentrations trigger release of INSIG, a conformational change in the SSC domain of SCAP, unmasking of the ER export signal, recruitment into COPII-coated vesicles, transport to the Golgi complex, proteolytic cleavage of SREBF in the Golgi, release of the transcription factor fragment of SREBF from the membrane, its import into the nucleus and up-regulation of LDLR, INSIG1 and the mevalonate pathway.confidentA2RRU4
Sterol regulatory element-binding protein cleavage-activating protein Escort protein required for cholesterol as well as lipid homeostasis. Regulates export of the SCAP/SREBF complex from the ER upon low cholesterol. Formation of a ternary complex with INSIG at high sterol concentrations leads to masking of an ER-export signal in SCAP and retention of the complex in the ER. Low sterol concentrations trigger release of INSIG, a conformational change in the SSC domain of SCAP, unmasking of the ER export signal, recruitment into COPII-coated vesicles, transport to the Golgi complex, proteolytic cleavage of SREBF in the Golgi, release of the transcription factor fragment of SREBF from the membrane, its import into the nucleus and up-regulation of LDLR, INSIG1 and the mevalonate pathway.confidentP97260
Sterol regulatory element-binding protein cleavage-activating protein Escort protein required for cholesterol as well as lipid homeostasis. Regulates export of the SCAP/SREBF complex from the ER upon low cholesterol. Formation of a ternary complex with INSIG at high sterol concentrations leads to masking of an ER-export signal in SCAP and retention of the complex in the ER. Low sterol concentrations trigger release of INSIG, a conformational change in the SSC domain of SCAP, unmasking of the ER export signal, recruitment into COPII-coated vesicles, transport to the Golgi complex, proteolytic cleavage of SREBF in the Golgi, release of the transcription factor fragment of SREBF from the membrane, its import into the nucleus and up-regulation of LDLR, INSIG1 and the mevalonate pathway.confidentQ12770

Prediction of Gene Ontology Terms ?

GO Term ?Description ?Confidence Level ?Parent GO Terms ?
GO:0005789 [CC]endoplasmic reticulum membraneprobableGO:0005737, GO:0005575, GO:0005783, GO:0044432, GO:0016020, GO:0044464, GO:0043229, GO:0005623, GO:0043231, GO:0044446, GO:0042175, GO:0044444, GO:0012505, GO:0044424, GO:0044425, GO:0005622, GO:0043227, GO:0043226, GO:0044422, GO:0031090
GO:0032933 [BP]SREBP signaling pathwayprobableGO:0009893, GO:0019222, GO:0031328, GO:0031326, GO:0031325, GO:0051173, GO:0031323, GO:0010628, GO:0023052, GO:0007165, GO:0050789, GO:0044699, GO:0080090, GO:0006984, GO:0051716, GO:0010604, GO:0051171, GO:0009891, GO:2000112, GO:0019219, GO:0010556, GO:0065007, GO:0048518, GO:0010468, GO:0045935, GO:0060255, GO:0009987, GO:0009889, GO:0050794, GO:0006950, GO:0044763, GO:0045893, GO:2001141, GO:0007154, GO:0044700, GO:0071501, GO:0006991, GO:0050896, GO:0051252, GO:0051254, GO:0006355, GO:0010557, GO:0006357, GO:0045944, GO:0033554, GO:0008150, GO:0048522
GO:0090110 [BP]cargo loading into COPII-coated vesicleprobableGO:0022607, GO:0070271, GO:0043933, GO:0006900, GO:0035459, GO:0061024, GO:0034622, GO:0044699, GO:0006888, GO:0071822, GO:0016044, GO:0016043, GO:0065003, GO:0071840, GO:0051641, GO:0006461, GO:0048193, GO:0006810, GO:0044765, GO:0044763, GO:0051649, GO:0051234, GO:0043623, GO:0051179, GO:0016482, GO:0006996, GO:0090114, GO:0016192, GO:0046907, GO:0016050, GO:0044085, GO:0008150, GO:0009987
GO:0030127 [CC]COPII vesicle coatprobableGO:0043227, GO:0043226, GO:0043229, GO:0030117, GO:0030133, GO:0030135, GO:0030134, GO:0005737, GO:0005575, GO:0031982, GO:0030662, GO:0016023, GO:0031410, GO:0016020, GO:0031988, GO:0044433, GO:0048475, GO:0030658, GO:0030659, GO:0012505, GO:0012506, GO:0012507, GO:0030120, GO:0031090, GO:0043234, GO:0032991, GO:0043231, GO:0044464, GO:0005623, GO:0005622, GO:0044446, GO:0044444, GO:0044424, GO:0044425, GO:0044422
GO:0005515 [MF]protein bindingprobableGO:0003674, GO:0005488
GO:0008203 [BP]cholesterol metabolic processprobableGO:0044238, GO:0044710, GO:0016125, GO:0008202, GO:0006629, GO:0006066, GO:0071704, GO:0008150, GO:0044281, GO:0008152, GO:1901360, GO:1901615
GO:0019217 [BP]regulation of fatty acid metabolic processprobableGO:0080090, GO:0019222, GO:0019216, GO:0031323, GO:0010565, GO:0050794, GO:0065007, GO:0008150, GO:0050789

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 3AQP, chain A
Confidence level:probable
Coverage over the Query: 20-88
View the alignment between query and template
View the model in PyMOL