RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16377
(1344 letters)
>d1xkua_ c.10.2.7 (A:) Decorin {Cow (Bos taurus) [TaxId: 9913]}
Length = 305
Score = 107 bits (266), Expect = 9e-26
Identities = 75/323 (23%), Positives = 137/323 (42%), Gaps = 30/323 (9%)
Query: 192 DLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALSSLRILNISSNH 251
LR++ S L + + L L+NN+I++I F L +L L + +N
Sbjct: 11 HLRVVQCSDLGLEKVP--KDL--PPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNK 66
Query: 252 LVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHIDETTFI 311
+ + G F+ + +Y KN L EL + L++ L + N ++ +
Sbjct: 67 ISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQE---LRVHENEITKVRKSVFNGL 123
Query: 312 GLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLHTIYLSE 371
+ ++ L + + + I+ F+ + L + + + +I I SL LH L
Sbjct: 124 NQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELH---LDG 180
Query: 372 NRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIPSALSE 431
N+I + A GL L+KL LS N + +D+ + N L+EL L++N +V++P L++
Sbjct: 181 NKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLAD 240
Query: 432 LPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKN 491
+++ + L N IS I + F G + S ++L N
Sbjct: 241 HKYIQVVYLHNNNISAIGSNDF------------------CPPGYNTKKASYSGVSLFSN 282
Query: 492 KIHQIEI--GTFEKNKRLAAIRL 512
+ EI TF AA++L
Sbjct: 283 PVQYWEIQPSTFRCVYVRAAVQL 305
Score = 97.0 bits (240), Expect = 3e-22
Identities = 71/277 (25%), Positives = 119/277 (42%), Gaps = 13/277 (4%)
Query: 318 ILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLHTIYLSENRIHHI 377
++ S+ L ++ D LDL+NN I I+D F +L NLHT+ L N+I I
Sbjct: 14 VVQCSDLGLEKVPKDLPPDT---ALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKI 70
Query: 378 TAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIPSALSELPFLKT 437
+ F L L +L LS N L + K K L+ + + + +
Sbjct: 71 SPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVE 130
Query: 438 LDLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKNKIHQIE 497
L + S IENG+F+ +++L+ +R+ D NI + G+ PSL L+L NKI +++
Sbjct: 131 LGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGL---PPSLTELHLDGNKITKVD 187
Query: 498 IGTFEKNKRLAAIRLDSNF-LTDINGVFTYLAQLLWLNLSENHLVWFDYAMV-PGNLKWL 555
+ + LA + L N NG L L+L+ N LV + ++ +
Sbjct: 188 AASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVV 247
Query: 556 DIHGNYISSLNN-----YYEIKDGLSIKNLDASHNRI 587
+H N IS++ + S + N +
Sbjct: 248 YLHNNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPV 284
Score = 92.8 bits (229), Expect = 7e-21
Identities = 57/262 (21%), Positives = 103/262 (39%), Gaps = 17/262 (6%)
Query: 316 LIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLHTIYLSENRIH 375
+L+L NN++T I FK+L L L L NN I I AF L L +YLS+N++
Sbjct: 33 TALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK 92
Query: 376 HITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVE---IPSALSEL 432
+ + L +L + N + + F + + ++L +N + A +
Sbjct: 93 ELPEKMP---KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGM 149
Query: 433 PFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKNK 492
L + + + I+ I G +L + L L N I + + L L +L L LS N
Sbjct: 150 KKLSYIRIADTNITTIPQGLPPSLTE---LHLDGNKITKVDAASLKGLNNLAKLGLSFNS 206
Query: 493 IHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTYLAQLLWLNLSENHLVWFDYAMVPG-- 550
I ++ G+ L + L++N L + G + + L N++
Sbjct: 207 ISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGSNDFCPPG 266
Query: 551 ------NLKWLDIHGNYISSLN 566
+ + + N +
Sbjct: 267 YNTKKASYSGVSLFSNPVQYWE 288
Score = 87.8 bits (216), Expect = 3e-19
Identities = 65/295 (22%), Positives = 114/295 (38%), Gaps = 21/295 (7%)
Query: 112 SKKLDLVPGSLDGLRELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSIRDIDTLGFA 171
L+ VP L + +L++ ++ I I D F +L N+ TL L N I I FA
Sbjct: 19 DLGLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFA 76
Query: 172 ----VRRASAESNSGEKIECSGGMDLRILDLSHNKLRTLGDYS-GITKFRRLQNLHLENN 226
+ R N +++ L+ L + N++ + + L
Sbjct: 77 PLVKLERLYLSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPL 136
Query: 227 EISQIAPNAFVALSSLRILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHK 286
+ S I AF + L + I+ ++ ++P+GL S E++ N + ++
Sbjct: 137 KSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLT---ELHLDGNKITKVDAASLKG 193
Query: 287 LEQLLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLR 346
L L L LS N +S+ L L+L+NN+L D ++Q + L
Sbjct: 194 LNNLAKLGLSFNSISAVDNGSLANT--PHLRELHLNNNKL-VKVPGGLADHKYIQVVYLH 250
Query: 347 NNSIGYIEDNAF------LSLYNLHTIYLSENRIHHITAH--LFNGLYVLSKLTL 393
NN+I I N F + + L N + + F +YV + + L
Sbjct: 251 NNNISAIGSNDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 305
Score = 74.7 bits (182), Expect = 7e-15
Identities = 45/169 (26%), Positives = 70/169 (41%), Gaps = 11/169 (6%)
Query: 744 CPKNCSCFHDQNWNTNVVDCSEQQISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKNM 803
CP C C + VV CS+ + VP +P D + L N I + F KN+
Sbjct: 4 CPFRCQC------HLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNL 57
Query: 804 LSLYVNNSQIEVILNQTFNGLSSLQVLHLENNLITHFYGYEFDNLEKLSELYLQENRIEY 863
+L + N++I I F L L+ L+L N + L+ EL + EN I
Sbjct: 58 HTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKTLQ---ELRVHENEITK 114
Query: 864 IANGTFNALISLQVLQLDGNRLKSFRAFDLNTNSM--LRKVYLGNNPFS 910
+ FN L + V++L N LKS + M L + + + +
Sbjct: 115 VRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT 163
Score = 72.4 bits (176), Expect = 5e-14
Identities = 64/339 (18%), Positives = 127/339 (37%), Gaps = 55/339 (16%)
Query: 34 GSNLSFVPTDLITKL-NIDCDATVLLDSSITTKSFQNIYSLEELKISNCKLVELPVDVFS 92
L VP DL +D + + I F+N+ +L L + N K+ ++ F+
Sbjct: 19 DLGLEKVPKDLPPDTALLDLQNNKI--TEIKDGDFKNLKNLHTLILINNKISKISPGAFA 76
Query: 93 GLRNLKRLTINTRNLQWDKSKKLDLVPGSLDGLRELQVLNISSSNIKSISDDVFCSLANI 152
L L+RL ++ L+ +P + + LQ L + + I + VF L +
Sbjct: 77 PLVKLERLYLSKNQLKE--------LPEKMP--KTLQELRVHENEITKVRKSVFNGLNQM 126
Query: 153 QTLNLSRNSIRDIDTLGFAVRRASAESNSGEKIECSGGMDLRILDLSHNKLRTLGDYSGI 212
+ L N ++ A G L + ++ + T+
Sbjct: 127 IVVELGTNPLKSSGIENGA---------------FQGMKKLSYIRIADTNITTIPQGL-- 169
Query: 213 TKFRRLQNLHLENNEISQIAPNAFVALSSLRILNISSNHLVSLPEGLFSSCRDISEIYAQ 272
L LHL+ N+I+++ + L++L L +S N + ++ G ++ + E++
Sbjct: 170 --PPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLN 227
Query: 273 KNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNELTRIDAK 332
N LV++ GL + + V+ L +N++S+ I F
Sbjct: 228 NNKLVKVPGGLAD-HKYIQVVYLHNNNISA--IGSNDFCPP------------------G 266
Query: 333 TFKDLVFLQRLDLRNNSIGY--IEDNAFLSLYNLHTIYL 369
+ L +N + Y I+ + F +Y + L
Sbjct: 267 YNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 305
Score = 63.9 bits (154), Expect = 3e-11
Identities = 59/273 (21%), Positives = 104/273 (38%), Gaps = 31/273 (11%)
Query: 408 NCSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDN 467
C L+ + S + ++P L P LDL N+I++I++G FKNL
Sbjct: 9 QCH-LRVVQCSDLGLEKVPKDLP--PDTALLDLQNNKITEIKDGDFKNL----------- 54
Query: 468 NIGNLSSGMLYELPSLEVLNLSKNKIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTYL 527
+L L L NKI +I G F +L + L N L ++
Sbjct: 55 -------------KNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLKELPEKMPKT 101
Query: 528 AQLLWLNLSENHLVWFDYAMVPGNLKWLDIHGNYISSLNNYYEIKDGL-SIKNLDASHNR 586
Q L ++ +E V + +++ N + S G+ + + +
Sbjct: 102 LQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTN 161
Query: 587 ILEISELSIPNSVEVLFINNNLIKSVKPHTFFDKSNLARVDIYANDITKLDLTALRLKPV 646
I I + +P S+ L ++ N I V + +NLA++ + N I+ +D +L P
Sbjct: 162 ITTIPQ-GLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPH 220
Query: 647 PQNKTLPEFYLGGNPFDCD--CSMDWLPIINNN 677
+ L L P + + + NNN
Sbjct: 221 LRELHLNNNKLVKVPGGLADHKYIQVVYLHNNN 253
Score = 60.8 bits (146), Expect = 3e-10
Identities = 52/320 (16%), Positives = 104/320 (32%), Gaps = 48/320 (15%)
Query: 576 SIKNLDASHNRILEISELSIPNSVEVLFINNNLIKSVKPHTFFDKSNLARVDIYANDITK 635
++ + S + ++ + +P +L + NN I +K F + NL + + N I+K
Sbjct: 11 HLRVVQCSDLGLEKVPK-DLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISK 69
Query: 636 LDLTALRLKPVPQNKTLPEFYLGGNPFDCDCSMDWLPIINNNTSPSMERQYPKIMDLDNV 695
+ A L YL N M + ++ +N
Sbjct: 70 ISPGAFA-----PLVKLERLYLSKNQLK-------------ELPEKMPKTLQELRVHENE 111
Query: 696 VCKMTYSRGSTHLPASEAAPSQYLCPYDIHCFALCHCCEFDACDCEMTCPKNCSCFHDQN 755
+ K+ S L + + +
Sbjct: 112 ITKVRKS----------------------VFNGLNQMIVVELGTNPLKSSGIENGAFQGM 149
Query: 756 WNTNVVDCSEQQISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKNMLSLYVNNSQIEV 815
+ + ++ I+T+P +P T ++LDGN + G N+ L ++ + I
Sbjct: 150 KKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSISA 209
Query: 816 ILNQTFNGLSSLQVLHLENNLITHFYGYEFDNLEKLSELYLQENRIEYIANGTFN----- 870
+ N + L+ LHL NN + + + + +YL N I I + F
Sbjct: 210 VDNGSLANTPHLRELHLNNNKLVKVP-GGLADHKYIQVVYLHNNNISAIGSNDFCPPGYN 268
Query: 871 -ALISLQVLQLDGNRLKSFR 889
S + L N ++ +
Sbjct: 269 TKKASYSGVSLFSNPVQYWE 288
Score = 51.2 bits (121), Expect = 4e-07
Identities = 45/291 (15%), Positives = 91/291 (31%), Gaps = 20/291 (6%)
Query: 548 VPGNLKWLDIHGNYISSLNNYYEIKDGLSIKNLDASHNRILEISELSIPN--SVEVLFIN 605
+P + LD+ N I+ + + + K+ ++ L +N+I +IS + +E L+++
Sbjct: 29 LPPDTALLDLQNNKITEIKDG-DFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 87
Query: 606 NNLIKSVKPHTFFDKSNLARVDIYANDITKLDLTALRLKPVPQNKTLPEFYLGGNP--FD 663
N +K + L + + K L V + T P G F
Sbjct: 88 KNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQ 147
Query: 664 CDCSMDWLPIINNNTSPSMERQYPKIMDLDNVVCKMTYSRGST--HLPASEAAPSQYLCP 721
+ ++ I + N + + P + +L K+T ++ L +
Sbjct: 148 GMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAKLGLSFNSI 207
Query: 722 YDIHCFALCHCCEFDACDCEMTCPKNCSCFHDQNWNTNVVDCSEQQISTVPPRIPMDATH 781
+ +L + + VV IS +
Sbjct: 208 SAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNNISAIGS-------- 259
Query: 782 VYLDGNTFKTIPNHVFIGRKNMLSLYVNNSQIEVILNQTFNGLSSLQVLHL 832
N F + + +SL+ N Q I TF + + L
Sbjct: 260 -----NDFCPPGYNTKKASYSGVSLFSNPVQYWEIQPSTFRCVYVRAAVQL 305
Score = 47.0 bits (110), Expect = 9e-06
Identities = 36/171 (21%), Positives = 69/171 (40%), Gaps = 8/171 (4%)
Query: 763 CSEQQISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKNMLSLYVNNSQIEVI--LNQT 820
S+ Q+ +P ++P + + N + VF G M+ + + + ++ N
Sbjct: 86 LSKNQLKELPEKMPKTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGA 145
Query: 821 FNGLSSLQVLHLENNLITHFYGYEFDNLEKLSELYLQENRIEYIANGTFNALISLQVLQL 880
F G+ L + + + IT +L EL+L N+I + + L +L L L
Sbjct: 146 FQGMKKLSYIRIADTNITTIPQGLPPSLT---ELHLDGNKITKVDAASLKGLNNLAKLGL 202
Query: 881 DGNRLKSFRAFDLNTNSMLRKVYLGNN---PFSCSCATLQELQTWIIDNSN 928
N + + L LR+++L NN A + +Q + N+N
Sbjct: 203 SFNSISAVDNGSLANTPHLRELHLNNNKLVKVPGGLADHKYIQVVYLHNNN 253
Score = 34.6 bits (78), Expect = 0.061
Identities = 18/78 (23%), Positives = 30/78 (38%)
Query: 851 LSELYLQENRIEYIANGTFNALISLQVLQLDGNRLKSFRAFDLNTNSMLRKVYLGNNPFS 910
+ L LQ N+I I +G F L +L L L N++ L ++YL N
Sbjct: 33 TALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK 92
Query: 911 CSCATLQELQTWIIDNSN 928
+ + + + N
Sbjct: 93 ELPEKMPKTLQELRVHEN 110
>d1fyxa_ c.23.2.1 (A:) Toll-like receptor 2, TLR2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 149
Score = 91.7 bits (227), Expect = 5e-22
Identities = 32/170 (18%), Positives = 62/170 (36%), Gaps = 43/170 (25%)
Query: 1036 KDEEFVLQSIVAELEHGNPSYQLCLHYRDLPHHSPYLQQHTTSPVVIEAAEASRRVILVL 1095
+D +V +V ELE+ NP ++LCLH RD H +
Sbjct: 15 RDAYWVENLMVQELENFNPPFKLCLHKRDFIHGKWIIDNI-------------------- 54
Query: 1096 TKNFLQTEWSRSDFLIEAAEASRRVILVLTKNFLQTEWSRSDFRSAIHEALTTKTHKLVL 1155
I++ E S + + VL++NF+++EW + + + +L
Sbjct: 55 ---------------IDSIEKSHKTVFVLSENFVKSEWCKYELDFSHFRLFDENNDAAIL 99
Query: 1156 V---EENIVPEAESDIELKPYLKSCMKIRW-----GEKRFWERLRYAMPT 1197
+ + +L+ + + + W + FW LR A+ +
Sbjct: 100 ILLEPIEKKAIPQRFCKLRKIMNTKTYLEWPMDEAQREGFWVNLRAAIKS 149
>d2omza2 c.10.2.1 (A:33-416) Internalin A {Listeria monocytogenes
[TaxId: 1639]}
Length = 384
Score = 88.1 bits (217), Expect = 7e-19
Identities = 78/364 (21%), Positives = 133/364 (36%), Gaps = 36/364 (9%)
Query: 121 SLDGLRELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSIRDIDTLGFAVRRASAESN 180
S L ++ L IKSI L N+ +N S N + DI L + N
Sbjct: 39 SQTDLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMN 96
Query: 181 SGEKIECSGGMDLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALS 240
+ + + + +L L + D + L L L +N IS I+ + +
Sbjct: 97 NNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSL 156
Query: 241 SLRILNISSNHLVSL-----------------PEGLFSSCRDISEIYAQKNSLVELSRGL 283
L L + + ++ + A N + +++
Sbjct: 157 QQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLG 216
Query: 284 FHKLEQLLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRL 343
L L L+ N L D T L L L+L+NN+++ + L L L
Sbjct: 217 ILT--NLDELSLNGNQLK----DIGTLASLTNLTDLDLANNQISNLAP--LSGLTKLTEL 268
Query: 344 DLRNNSIGYIEDNAFLSLYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSNNLLVNIDS 403
L N I I A L+ + ++ ++L N L+ LTL N + +I
Sbjct: 269 KLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKN----LTYLTLYFNNISDISP 324
Query: 404 KAFKNCSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLR 463
+ + L+ L ++N + ++ S L+ L + L G NQIS + NL ++T L
Sbjct: 325 --VSSLTKLQRLFFANNKVSDVSS-LANLTNINWLSAGHNQISDLT--PLANLTRITQLG 379
Query: 464 LVDN 467
L D
Sbjct: 380 LNDQ 383
Score = 85.1 bits (209), Expect = 7e-18
Identities = 77/397 (19%), Positives = 131/397 (32%), Gaps = 60/397 (15%)
Query: 123 DGLRELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSIRDIDTLGFAVRRASAESNSG 182
L E + +N+ L + TL R I+ ID + +
Sbjct: 19 TALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSIDGVEYLNN--------- 67
Query: 183 EKIECSGGMDLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALSSL 242
L ++ S+N+L + +TK + + + +I+ +A + +L
Sbjct: 68 ----------LTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTL 117
Query: 243 RILNISSNHLVSLPEGLFSSCRDISEI--------YAQKNSLVELSRGLFHKLEQLLVLD 294
I+ + L + I L ++ K L
Sbjct: 118 FNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTL 177
Query: 295 LSSNHLSSNHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIE 354
+ S+ D + L L L +NN+++ I L L L N + I
Sbjct: 178 ERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILT--NLDELSLNGNQLKDIG 235
Query: 355 DNAFLSLYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSNNLLVNIDS----------- 403
SL NL + L+ N+I ++ +GL L++L L N + NI
Sbjct: 236 --TLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLE 291
Query: 404 ---------KAFKNCSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIENGSFK 454
N L L L N I +I +S L L+ L N++S + S
Sbjct: 292 LNENQLEDISPISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFANNKVSDVS--SLA 348
Query: 455 NLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKN 491
NL + L N I +L+ L L + L L+
Sbjct: 349 NLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
Score = 72.7 bits (177), Expect = 7e-14
Identities = 77/364 (21%), Positives = 136/364 (37%), Gaps = 23/364 (6%)
Query: 206 LGDYSGITKFRRLQNLHLENNEISQIAPNAFVALSSLRILNISSNHLVSLP--------E 257
+ D T ++ L + I I + L++L +N S+N L +
Sbjct: 34 VTDTVSQTDLDQVTTLQADRLGIKSI--DGVEYLNNLTQINFSNNQLTDITPLKNLTKLV 91
Query: 258 GLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHIDETTFIGLIRLI 317
+ + I++I N LF+ + + +L+ + T + L
Sbjct: 92 DILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALS 151
Query: 318 ILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSI-GYIEDNAFLSLYNLHTIYLSENRIHH 376
L K L L L+ + S + + L NL ++ + N+I
Sbjct: 152 GLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISD 211
Query: 377 ITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIPSALSELPFLK 436
IT L +L+L+ N L +I + + + L +LDL++N I + LS L L
Sbjct: 212 ITPLGIL--TNLDELSLNGNQLKDIGT--LASLTNLTDLDLANNQISNLAP-LSGLTKLT 266
Query: 437 TLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKNKIHQI 496
L LG NQIS I L LT+L L +N + + + L +L L L N I I
Sbjct: 267 ELKLGANQISNIS--PLAGLTALTNLELNENQLED--ISPISNLKNLTYLTLYFNNISDI 322
Query: 497 EIGTFEKNKRLAAIRLDSNFLTDINGVFTYLAQLLWLNLSENHLVWFDYAMVPGNLKWLD 556
+L + +N ++D++ L + WL+ N + + L
Sbjct: 323 S--PVSSLTKLQRLFFANNKVSDVSS-LANLTNINWLSAGHNQISDLTPLANLTRITQLG 379
Query: 557 IHGN 560
++
Sbjct: 380 LNDQ 383
Score = 68.9 bits (167), Expect = 1e-12
Identities = 78/358 (21%), Positives = 128/358 (35%), Gaps = 54/358 (15%)
Query: 287 LEQLLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLR 346
L+Q+ L + S ID + L L +N SNN+LT I K+L L + +
Sbjct: 43 LDQVTTLQADRLGIKS--IDGVEY--LNNLTQINFSNNQLTDITP--LKNLTKLVDILMN 96
Query: 347 NNSIGYIEDNAFL---------------------------------SLYNLHTIYLSENR 373
NN I I A L ++ ++ + +
Sbjct: 97 NNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSL 156
Query: 374 IHHITAHLFNGLYVLSKLT----LSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIPSAL 429
+ L L+ LT L + D + L+ L ++N I +I
Sbjct: 157 QQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLG 216
Query: 430 SELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLS 489
L L L NQ+ I G+ +L LTDL L +N I NL+ L L L L L
Sbjct: 217 IL-TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLG 271
Query: 490 KNKIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTYLAQLLWLNLSENHLVWFDYAMVP 549
N+I I + + + L L +L L N++
Sbjct: 272 ANQISNISPLAGLTALT---NLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSL 328
Query: 550 GNLKWLDIHGNYISSLNNYYEIKDGLSIKNLDASHNRILEISELSIPNSVEVLFINNN 607
L+ L N +S ++ + + +I L A HN+I +++ L+ + L +N+
Sbjct: 329 TKLQRLFFANNKVSDVS---SLANLTNINWLSAGHNQISDLTPLANLTRITQLGLNDQ 383
Score = 66.2 bits (160), Expect = 8e-12
Identities = 60/354 (16%), Positives = 125/354 (35%), Gaps = 35/354 (9%)
Query: 57 LLDSSITT-KSFQNIYSLEELKISNCKLVELPVDVFSGLRNLKRLTIN------------ 103
I + + + +L ++ SN +L ++ L L + +N
Sbjct: 51 ADRLGIKSIDGVEYLNNLTQINFSNNQLTDIT--PLKNLTKLVDILMNNNQIADITPLAN 108
Query: 104 -TRNLQWDKSKKLDLVPGSLDGLRELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSI 162
T L L L L +SS+ I IS + + +
Sbjct: 109 LTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDL 168
Query: 163 RDIDTLGFAVRRASAESNSGEKIECSGGMDLRILDLSHNKLRTLGDYSGITKFRRLQNLH 222
+ + L R + + + + +L L ++N++ + + + L L
Sbjct: 169 KPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDI---TPLGILTNLDELS 225
Query: 223 LENNEISQIAPNAFVALSSLRILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRG 282
L N++ I +L++L L++++N + +L S ++E+ N + +S
Sbjct: 226 LNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP- 280
Query: 283 LFHKLEQLLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQR 342
L + + D + L L L L N ++ I L LQR
Sbjct: 281 -----LAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISP--VSSLTKLQR 333
Query: 343 LDLRNNSIGYIEDNAFLSLYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSNN 396
L NN + + + +L N++ + N+I +T L +++L L++
Sbjct: 334 LFFANNKVSDVS--SLANLTNINWLSAGHNQISDLTP--LANLTRITQLGLNDQ 383
Score = 60.8 bits (146), Expect = 5e-10
Identities = 48/364 (13%), Positives = 101/364 (27%), Gaps = 31/364 (8%)
Query: 563 SSLNNYYEIKDGLSIKNLDASHNRILEISELSIPNSVEVLFINNNLIKSVKPHTFFDKSN 622
+++ + D + L A I I + N++ + +NN + + P + +
Sbjct: 32 TNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITP--LKNLTK 89
Query: 623 LARVDIYANDITKLDLTALRLKPVPQNKTLPEFYLGGNPFDCDCSMDWLPIINNNTSPSM 682
L + + N I + A + + N + S
Sbjct: 90 LVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISA 149
Query: 683 ERQYPKIMDLDNVVCKMTYSRGSTHLPASEAAPSQYLCPYDIHCFALCHCCEFDACDCEM 742
+ L + S L + A + ++
Sbjct: 150 LSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQI 209
Query: 743 TCPKNCSCFHD------------------QNWNTNVVDCSEQQISTVPPRIPMDA-THVY 783
+ + N +D + QIS + P + T +
Sbjct: 210 SDITPLGILTNLDELSLNGNQLKDIGTLASLTNLTDLDLANNQISNLAPLSGLTKLTELK 269
Query: 784 LDGNTFKTIPNHVFIGRKNMLSLYVNNSQIEVILNQTFNGLSSLQVLHLENNLITHFYGY 843
L N I + L L N + + L +L L L N I+
Sbjct: 270 LGANQISNISPLAGLTALTNLELNENQLED----ISPISNLKNLTYLTLYFNNISDI--S 323
Query: 844 EFDNLEKLSELYLQENRIEYIANGTFNALISLQVLQLDGNRLKSFRAFDLNTNSMLRKVY 903
+L KL L+ N++ ++ + L ++ L N++ T + ++
Sbjct: 324 PVSSLTKLQRLFFANNKVSDVS--SLANLTNINWLSAGHNQISDLTPLANLTR--ITQLG 379
Query: 904 LGNN 907
L +
Sbjct: 380 LNDQ 383
Score = 58.9 bits (141), Expect = 2e-09
Identities = 72/382 (18%), Positives = 128/382 (33%), Gaps = 51/382 (13%)
Query: 312 GLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLHTIYLSE 371
L + L +T D + DL + L I I+ +L+ NL I S
Sbjct: 20 ALAEKMKTVLGKTNVT--DTVSQTDLDQVTTLQADRLGIKSIDGVEYLN--NLTQINFSN 75
Query: 372 NRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIPSALSE 431
N++ IT L L + ++NN + +I A L + ++ L+
Sbjct: 76 NQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTN 133
Query: 432 LPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGMLY------------- 478
L L+ + IS + + + + NL++
Sbjct: 134 LNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNKVSDISVL 193
Query: 479 -ELPSLEVLNLSKNKIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTYLAQLLWLNLSE 537
+L +LE L + N+I I N L + L+ N L DI G L L L+L+
Sbjct: 194 AKLTNLESLIATNNQISDITPLGILTN--LDELSLNGNQLKDI-GTLASLTNLTDLDLAN 250
Query: 538 NHLVWFDYAMVPGNLKWLDIHGNYISSLNNYYEIKDGLS-------------------IK 578
N + L L + N IS+++ + + +
Sbjct: 251 NQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLT 310
Query: 579 NLDASHNRILEISELSIPNSVEVLFINNNLIKSVKPHTFFDKSNLARVDIYANDITKLDL 638
L N I +IS +S ++ LF NN + + + +N+ + N I+ L
Sbjct: 311 YLTLYFNNISDISPVSSLTKLQRLFFANNKVSD--VSSLANLTNINWLSAGHNQISDLT- 367
Query: 639 TALRLKPVPQNKTLPEFYLGGN 660
P+ + + L
Sbjct: 368 ------PLANLTRITQLGLNDQ 383
Score = 54.6 bits (130), Expect = 4e-08
Identities = 58/430 (13%), Positives = 122/430 (28%), Gaps = 66/430 (15%)
Query: 407 KNCSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVD 466
+ + L + + S ++L + TL I I+ + L LT + +
Sbjct: 19 TALAEKMKTVLGKTNVTDTVS-QTDLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSN 75
Query: 467 NNIGNLSSGMLYELPSLEVLNLSKNKIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTY 526
N + +++ L L L + ++ N+I I N + + D T
Sbjct: 76 NQLTDITP--LKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTN 133
Query: 527 LAQLLWLNLSENHLVWFDYAMVPGNLKWLDIHGNYISSLNNYYEIKDGLSIKNLDASHNR 586
L +L + + + + L + + + N + D S N+
Sbjct: 134 LNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERL-------DISSNK 186
Query: 587 ILEISELSIPNSVEVLFINNNLIKSVKPHTFFDKSNLARVDIYANDITKLDLTALRLKPV 646
+ +IS L+ ++E L NN I + P +NL + + N + + +
Sbjct: 187 VSDISVLAKLTNLESLIATNNQISDITPLGIL--TNLDELSLNGNQLKDIG-------TL 237
Query: 647 PQNKTLPEFYLGGNPFDCDCSMDWLPIINNNTSPSMERQYPKIMDLDNVVCKMTYSRGST 706
L + L N ++ + K+ +L
Sbjct: 238 ASLTNLTDLDLANNQI---------------SNLAPLSGLTKLTELK------------- 269
Query: 707 HLPASEAAPSQYLCPYDIHCFALCHCCEFDACDCEMTCPKNCSCFHDQNWNTNVVDCSEQ 766
L I + N +
Sbjct: 270 ------------LGANQISNISPLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFN 317
Query: 767 QISTVPPRIPMDA-THVYLDGNTFKTIPNHVFIGRKNMLSLYVNNSQIEVILNQTFNGLS 825
IS + P + ++ N + + N+ L ++QI + L+
Sbjct: 318 NISDISPVSSLTKLQRLFFANNKVSDVSS--LANLTNINWLSAGHNQISDLTP--LANLT 373
Query: 826 SLQVLHLENN 835
+ L L +
Sbjct: 374 RITQLGLNDQ 383
Score = 44.6 bits (104), Expect = 7e-05
Identities = 47/302 (15%), Positives = 94/302 (31%), Gaps = 33/302 (10%)
Query: 388 LSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQISK 447
++ L + +ID + + L +++ S+N + +I L L L + + NQI+
Sbjct: 46 VTTLQADRLGIKSIDG--VEYLNNLTQINFSNNQLTDIT-PLKNLTKLVDILMNNNQIAD 102
Query: 448 IENGSFKNLQQLTDLRLVDNNIGNLSSGMLY---------ELPSLEVLNLSKNKIHQIEI 498
I + L + + + + L+ +
Sbjct: 103 ITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLSFG 162
Query: 499 GTFEKNKRLAAIRLDSNFLTDINGVFTY-----LAQLLWLNLSENHLVWFDYAMVPGNLK 553
K LA + N V L L L + N + + NL
Sbjct: 163 NQVTDLKPLANLTTLERLDISSNKVSDISVLAKLTNLESLIATNNQISDITPLGILTNLD 222
Query: 554 WLDIHGNYISSLNNYYEIKDGLSIKNLDASHNRILEISELSIPNSVEVLFINNNLIKSVK 613
L ++GN + + + ++ +LD ++N+I ++ LS + L + N I ++
Sbjct: 223 ELSLNGNQLKDIGTLASLT---NLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNIS 279
Query: 614 PHTFFDKSNL----------ARVDIYANDITKLDLTALRLK---PVPQNKTLPEFYLGGN 660
P ++T L L + PV L + N
Sbjct: 280 PLAGLTALTNLELNENQLEDISPISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFANN 339
Query: 661 PF 662
Sbjct: 340 KV 341
>d1ozna_ c.10.2.7 (A:) Reticulon 4 receptor (Nogo-66 receptor, Ngr)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 84.1 bits (206), Expect = 4e-18
Identities = 66/281 (23%), Positives = 101/281 (35%), Gaps = 9/281 (3%)
Query: 187 CSGGMDLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALSSLRILN 246
C + L+ + GI Q + L N IS + +F A +L IL
Sbjct: 8 CYNEPKVTT-SCPQQGLQAVP--VGI--PAASQRIFLHGNRISHVPAASFRACRNLTILW 62
Query: 247 IS-SNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHI 305
+ + + L + FH L +L L L +
Sbjct: 63 LHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCG--LQEL 120
Query: 306 DETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLH 365
F GL L L L +N L + TF+DL L L L N I + + AF L++L
Sbjct: 121 GPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLD 180
Query: 366 TIYLSENRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVEI 425
+ L +NR+ H+ H F L L L L N L + ++A AL+ L L+ N V
Sbjct: 181 RLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCD 240
Query: 426 PSALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVD 466
A +L+ +++ + L L D
Sbjct: 241 CRARPLWAWLQKFRGSSSEVPCSLPQRLAG-RDLKRLAAND 280
Score = 73.7 bits (179), Expect = 1e-14
Identities = 47/195 (24%), Positives = 74/195 (37%), Gaps = 28/195 (14%)
Query: 744 CPKNCSCFHDQNWNTNVVDCSEQQISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKN- 802
CP C C+++ C +Q + VP IP + ++L GN +P F +N
Sbjct: 2 CPGACVCYNEPK---VTTSCPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNL 58
Query: 803 ------------------------MLSLYVNNSQIEVILNQTFNGLSSLQVLHLENNLIT 838
+N+Q+ + TF+GL L LHL+ +
Sbjct: 59 TILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQ 118
Query: 839 HFYGYEFDNLEKLSELYLQENRIEYIANGTFNALISLQVLQLDGNRLKSFRAFDLNTNSM 898
F L L LYLQ+N ++ + + TF L +L L L GNR+ S
Sbjct: 119 ELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHS 178
Query: 899 LRKVYLGNNPFSCSC 913
L ++ L N +
Sbjct: 179 LDRLLLHQNRVAHVH 193
Score = 64.4 bits (155), Expect = 2e-11
Identities = 51/272 (18%), Positives = 91/272 (33%), Gaps = 30/272 (11%)
Query: 319 LNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLHTIYLSENRIHHIT 378
+ L + QR+ L N I ++ +F + NL ++L N + I
Sbjct: 16 TSCPQQGLQAVPVGIPAAS---QRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARID 72
Query: 379 AHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIPSALSELPFLKTL 438
A F +L ++ P+ L L TL
Sbjct: 73 AAAFT----------------------GLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110
Query: 439 DLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKNKIHQIEI 498
L + ++ G F+ L L L L DN + L +L +L L L N+I +
Sbjct: 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPE 170
Query: 499 GTFEKNKRLAAIRLDSNFLTDIN-GVFTYLAQLLWLNLSENHLVWFDYAMV--PGNLKWL 555
F L + L N + ++ F L +L+ L L N+L + L++L
Sbjct: 171 RAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRALQYL 230
Query: 556 DIHGNYISSLNNYYEIKDGLSIKNLDASHNRI 587
++ N + ++ S + +
Sbjct: 231 RLNDNPWVCDCRARPLWA--WLQKFRGSSSEV 260
Score = 64.1 bits (154), Expect = 2e-11
Identities = 64/318 (20%), Positives = 107/318 (33%), Gaps = 51/318 (16%)
Query: 130 VLNISSSNIKSISDDVFCSLANIQTLNLSRNSIRDIDTLGFAVRRASAESNSGEKIECSG 189
+ ++++ + A Q + L N I + F
Sbjct: 15 TTSCPQQGLQAVPVGIP---AASQRIFLHGNRISHVPAASF-----------------RA 54
Query: 190 GMDLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALSSLRILNISS 249
+L IL L N L + + Q +N ++ + P F L L L++
Sbjct: 55 CRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDR 114
Query: 250 NHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHIDETT 309
L L GLF + +Y Q N+L L F L
Sbjct: 115 CGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGN-------------------- 154
Query: 310 FIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLHTIYL 369
L L L N ++ + + F+ L L RL L N + ++ +AF L L T+YL
Sbjct: 155 ------LTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYL 208
Query: 370 SENRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIV-EIPSA 428
N + + L L L L++N D +A + L++ SS+ + +P
Sbjct: 209 FANNLSALPTEALAPLRALQYLRLNDNPW-VCDCRARPLWAWLQKFRGSSSEVPCSLPQR 267
Query: 429 LSELPFLKTLDLGENQIS 446
L+ L N +
Sbjct: 268 LAGRDL---KRLAANDLQ 282
Score = 62.5 bits (150), Expect = 6e-11
Identities = 38/225 (16%), Positives = 74/225 (32%), Gaps = 4/225 (1%)
Query: 719 LCPYDIHCFALCHCCEFDACDCEMTCPKNCSCFHDQNWNTNVVDCSEQQISTVPPRIPMD 778
+ + + + + +
Sbjct: 47 VPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGR 106
Query: 779 ATHVYLDGNTFKTIPNHVFIGRKNMLSLYVNNSQIEVILNQTFNGLSSLQVLHLENNLIT 838
++LD + + +F G + LY+ ++ ++ + + TF L +L L L N I+
Sbjct: 107 LHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRIS 166
Query: 839 HFYGYEFDNLEKLSELYLQENRIEYIANGTFNALISLQVLQLDGNRLKSFRAFDLNTNSM 898
F L L L L +NR+ ++ F L L L L N L + L
Sbjct: 167 SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTEALAPLRA 226
Query: 899 LRKVYLGNNPFSCSCATLQELQTWIIDNSNKVKDGLDISCVIDES 943
L+ + L +NP+ C C + L W+ ++ C + +
Sbjct: 227 LQYLRLNDNPWVCDCR-ARPLWAWLQKFRGSSS---EVPCSLPQR 267
Score = 59.8 bits (143), Expect = 5e-10
Identities = 45/267 (16%), Positives = 87/267 (32%), Gaps = 30/267 (11%)
Query: 408 NCSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDN 467
+ +P + + + L N+IS + SF+ + LT L L N
Sbjct: 9 YNEPKVTTSCPQQGLQAVPVGIP--AASQRIFLHGNRISHVPAASFRACRNLTILWLHSN 66
Query: 468 NIGNLSSGMLYELPSLEVLNLSKNKIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTYL 527
+ G + + +
Sbjct: 67 VL--------------------ARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGR 106
Query: 528 AQLLWLNLSENHLVWFDYAMVPGNLKWLDIHGNYISSLNNYYEIKDGLSIKNLDASHNRI 587
L L+ + L++L + N + +L + +D ++ +L NRI
Sbjct: 107 LHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDT-FRDLGNLTHLFLHGNRI 165
Query: 588 LEISELSIPN--SVEVLFINNNLIKSVKPHTFFDKSNLARVDIYANDITKLDLTALRLKP 645
+ E + S++ L ++ N + V PH F D L + ++AN+++ L +
Sbjct: 166 SSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSAL-----PTEA 220
Query: 646 VPQNKTLPEFYLGGNPFDCDCSMDWLP 672
+ + L L NP+ CDC L
Sbjct: 221 LAPLRALQYLRLNDNPWVCDCRARPLW 247
Score = 39.0 bits (89), Expect = 0.003
Identities = 28/148 (18%), Positives = 58/148 (39%), Gaps = 12/148 (8%)
Query: 61 SITTKSFQNIYSLEELKISNCKLVELPVDVFSGLRNLKRLTINTRNLQWDKSKKLDLVPG 120
++ +F+++ +L L + ++ +P F GL +L RL ++ + P
Sbjct: 143 ALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNR-------VAHVHPH 195
Query: 121 SLDGLRELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSIR-DIDTLGFAVRRASAES 179
+ L L L + ++N+ ++ + L +Q L L+ N D
Sbjct: 196 AFRDLGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRARPL-WAWLQKFR 254
Query: 180 NSGEKIECSGGMDLR---ILDLSHNKLR 204
S ++ CS L + L+ N L+
Sbjct: 255 GSSSEVPCSLPQRLAGRDLKRLAANDLQ 282
Score = 29.4 bits (64), Expect = 3.1
Identities = 29/256 (11%), Positives = 62/256 (24%), Gaps = 36/256 (14%)
Query: 580 LDASHNRILEISELSIPNSVEVLFINNNLIKSVKPHTFFDKSNLARVDIYANDITKLDLT 639
+ + IP + + +F++ N I V +F NL + +++N
Sbjct: 16 TSCPQQGLQAVPV-GIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNV------- 67
Query: 640 ALRLKPVPQNKTLPEFYLGGNPFDCDCSMDWLPIINNNTSPSMERQYPKIMDLDNVVCKM 699
N + + L
Sbjct: 68 -------------LARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRL------- 107
Query: 700 TYSRGSTHLPASEAAPSQYLCPYDIHCFALCHCCEFDACDCEMTCPKNCSCFHDQNWNTN 759
L + AL + + P + +
Sbjct: 108 ------HTLHLDRCGLQELGPGLFRGLAALQYLYLQ--DNALQALPDDTFRDLGNLTHLF 159
Query: 760 VVDCSEQQISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKNMLSLYVNNSQIEVILNQ 819
+ + R + L N + H F +++LY+ + + + +
Sbjct: 160 LHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSALPTE 219
Query: 820 TFNGLSSLQVLHLENN 835
L +LQ L L +N
Sbjct: 220 ALAPLRALQYLRLNDN 235
>d1fyva_ c.23.2.1 (A:) Toll-like receptor 1, TLR1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 161
Score = 76.3 bits (187), Expect = 2e-16
Identities = 34/170 (20%), Positives = 57/170 (33%), Gaps = 45/170 (26%)
Query: 1036 KDEEFVLQSIVAELEHGNPSYQLCLHYRDLPHHSPYLQQHTTSPVVIEAAEASRRVILVL 1095
D +V ++ LE Q+CLH R+
Sbjct: 22 HDSFWVKNELLPNLE--KEGMQICLHERNFVPGKSI------------------------ 55
Query: 1096 TKNFLQTEWSRSDFLIEAAEASRRVILVLTKNFLQTEWSRSDFRSAIHEALTTKTHKLVL 1155
+ +I E S + I VL+ NF+Q+EW + A H ++ L+L
Sbjct: 56 -----------VENIITCIEKSYKSIFVLSPNFVQSEWCHYELYFAHHNLFHEGSNSLIL 104
Query: 1156 VEENIVPEAE---SDIELKPYLKSCMKIRWGE-----KRFWERLRYAMPT 1197
+ +P+ S +LK + + W + FW LR A+
Sbjct: 105 ILLEPIPQYSIPSSYHKLKSLMARRTYLEWPKEKSKRGLFWANLRAAINI 154
>d1p9ag_ c.10.2.7 (G:) von Willebrand factor binding domain of
glycoprotein Ib alpha {Human (Homo sapiens) [TaxId:
9606]}
Length = 266
Score = 69.7 bits (169), Expect = 2e-13
Identities = 43/237 (18%), Positives = 79/237 (33%), Gaps = 49/237 (20%)
Query: 748 CSCFHDQNWNTNVVDCSEQQISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKNMLSLY 807
C + + V+C ++ ++ +PP +P D T ++L N T + + L
Sbjct: 4 CEV--SKVASHLEVNCDKRNLTALPPDLPKDTTILHLSENLLYTFSLATLMPYTRLTQLN 61
Query: 808 VNNSQ---------------------------------------------IEVILNQTFN 822
++ ++ + +
Sbjct: 62 LDRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALR 121
Query: 823 GLSSLQVLHLENNLITHFYGYEFDNLEKLSELYLQENRIEYIANGTFNALISLQVLQLDG 882
GL LQ L+L+ N + KL +L L N + + G N L +L L L
Sbjct: 122 GLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQE 181
Query: 883 NRLKSFRAFDLNTNSMLRKVYLGNNPFSCSCATLQELQTWIIDNSNKVKDGLDISCV 939
N L + + +L +L NP+ C+C + + W+ DN+ V V
Sbjct: 182 NSLYTIPK-GFFGSHLLPFAFLHGNPWLCNCE-ILYFRRWLQDNAENVYVWKQGVDV 236
Score = 62.8 bits (151), Expect = 4e-11
Identities = 44/205 (21%), Positives = 77/205 (37%), Gaps = 8/205 (3%)
Query: 239 LSSLRILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSN 298
++S +N +L +LP L +D + ++ +N L S +L L+L
Sbjct: 9 VASHLEVNCDKRNLTALPPDLP---KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRA 65
Query: 299 HLSSNHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAF 358
L+ +D T + ++ ++ + + L L LD+ N + + A
Sbjct: 66 ELTKLQVDGT-----LPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGAL 120
Query: 359 LSLYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLS 418
L L +YL N + + L L KL+L+NN L + + L L L
Sbjct: 121 RGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQ 180
Query: 419 SNAIVEIPSALSELPFLKTLDLGEN 443
N++ IP L L N
Sbjct: 181 ENSLYTIPKGFFGSHLLPFAFLHGN 205
Score = 60.9 bits (146), Expect = 2e-10
Identities = 46/266 (17%), Positives = 81/266 (30%), Gaps = 55/266 (20%)
Query: 406 FKNCSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLV 465
++ E++ + +P L L L EN + + +LT L L
Sbjct: 6 VSKVASHLEVNCDKRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNL- 62
Query: 466 DNNIGNLSSGMLYELPSLEVLNLSKNKIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFT 525
+ + LP L L+LS N++ + + + + G
Sbjct: 63 -DRAELTKLQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALR 121
Query: 526 YLAQLLWLNLSENHLVWFDYAMVPGNLKWLDIHGNYISSLNNYYEIKDGLSIKNLDASHN 585
L +L L L N L PG L + NN E+ G
Sbjct: 122 GLGELQELYLKGNELKTLP----PGLLTPTPKLEKLSLANNNLTELPAG----------- 166
Query: 586 RILEISELSIPNSVEVLFINNNLIKSVKPHTFFDKSNLARVDIYANDITKLDLTALRLKP 645
L+ +++ L + N + ++ P FF
Sbjct: 167 ------LLNGLENLDTLLLQENSLYTI-PKGFFG-------------------------- 193
Query: 646 VPQNKTLPEFYLGGNPFDCDCSMDWL 671
+ LP +L GNP+ C+C + +
Sbjct: 194 ---SHLLPFAFLHGNPWLCNCEILYF 216
Score = 54.0 bits (128), Expect = 3e-08
Identities = 40/211 (18%), Positives = 66/211 (31%), Gaps = 10/211 (4%)
Query: 186 ECSGGMDLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALSSLRIL 245
E S ++ L L + + LHL N + + + + L L
Sbjct: 5 EVSKVASHLEVNCDKRNLTAL--PPDL--PKDTTILHLSENLLYTFSLATLMPYTRLTQL 60
Query: 246 NISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHI 305
N+ L + + S +L + L + +
Sbjct: 61 NLDRAELTK-----LQVDGTLPVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSL 115
Query: 306 DETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLH 365
GL L L L NEL + L++L L NN++ + L NL
Sbjct: 116 PLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLD 175
Query: 366 TIYLSENRIHHITAHLFNGLYVLSKLTLSNN 396
T+ L EN ++ I F ++L L N
Sbjct: 176 TLLLQENSLYTIPKGFFG-SHLLPFAFLHGN 205
Score = 50.1 bits (118), Expect = 6e-07
Identities = 37/190 (19%), Positives = 71/190 (37%), Gaps = 6/190 (3%)
Query: 112 SKKLDLVPGSLDGLRELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNS---IRDIDTL 168
+ L +P L ++ +L++S + + + S + LNL R ++ TL
Sbjct: 19 KRNLTALPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQVDGTL 76
Query: 169 GFAVRRASAESNSGEKIECSGGMDLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEI 228
+ + + + T + LQ L+L+ NE+
Sbjct: 77 PVLGTLDLSHNQLQSLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNEL 136
Query: 229 SQIAPNAFVALSSLRILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLE 288
+ P L L++++N+L LP GL + ++ + Q+NSL + +G F
Sbjct: 137 KTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLYTIPKGFF-GSH 195
Query: 289 QLLVLDLSSN 298
L L N
Sbjct: 196 LLPFAFLHGN 205
>d1w8aa_ c.10.2.7 (A:) Slit {Fruit fly (Drosophila melanogaster)
[TaxId: 7227]}
Length = 192
Score = 63.7 bits (153), Expect = 7e-12
Identities = 40/186 (21%), Positives = 65/186 (34%), Gaps = 7/186 (3%)
Query: 744 CPKNCSCFHDQNWNTNVVDCSEQQISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKNM 803
CP C C VDC+ + + +P IP+ T + L+ N I + GR
Sbjct: 2 CPAMCHC------EGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPH 55
Query: 804 LSLYVNNSQIEVILNQTFNGLSSLQVLH-LENNLITHFYGYEFDNLEKLSELYLQENRIE 862
L + +S L N I F L +L L L +N+I
Sbjct: 56 LVKLELKRNQLTGIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQIS 115
Query: 863 YIANGTFNALISLQVLQLDGNRLKSFRAFDLNTNSMLRKVYLGNNPFSCSCATLQELQTW 922
+ G+F L SL L L N + +K G + + ++++Q
Sbjct: 116 CVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRDVQIK 175
Query: 923 IIDNSN 928
+ +S
Sbjct: 176 DLPHSE 181
Score = 40.6 bits (93), Expect = 4e-04
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 3/100 (3%)
Query: 108 QWDKSKKLDLVPGSLDGLRELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSIRDIDT 167
Q ++K ++ GL +L+ LN+ + I + F L ++ +LNL+ N
Sbjct: 84 QLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCH 143
Query: 168 LGFAVRRASAESNSGEKIECSGGMDLR---ILDLSHNKLR 204
L + +S +G C +R I DL H++ +
Sbjct: 144 LAWFAEWLRKKSLNGGAARCGAPSKVRDVQIKDLPHSEFK 183
Score = 40.6 bits (93), Expect = 5e-04
Identities = 30/180 (16%), Positives = 59/180 (32%), Gaps = 8/180 (4%)
Query: 241 SLRILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHL 300
++ + L +P + +E+ N L +S LV +
Sbjct: 9 EGTTVDCTGRGLKEIPRDIPL---HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQ 65
Query: 301 SSNHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLS 360
+ L L N++ I K F L L+ L+L +N I + +F
Sbjct: 66 LTGIEPNAFEGASHI-QELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEH 124
Query: 361 LYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLSSN 420
L +L ++ + + HL L K +L+ ++ ++ DL +
Sbjct: 125 LNSLTSLN-LASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRD---VQIKDLPHS 180
Score = 32.5 bits (72), Expect = 0.24
Identities = 42/172 (24%), Positives = 73/172 (42%), Gaps = 6/172 (3%)
Query: 391 LTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIPSAL--SELPFLKTLDLGENQISKI 448
+ + L I + EL L+ N + I S LP L L+L NQ++ I
Sbjct: 13 VDCTGRGLKEIPRDIPLH---TTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGI 69
Query: 449 ENGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKNKIHQIEIGTFEKNKRLA 508
E +F+ + +L+L +N I +S+ M L L+ LNL N+I + G+FE L
Sbjct: 70 EPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLT 129
Query: 509 AIRLDSNFLTDINGVFTYLAQLLWLNLSENHLVWFDYAMVPGNLKWLDIHGN 560
++ L SN + + L +L+ + V ++ D+ +
Sbjct: 130 SLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAPSKVRD-VQIKDLPHS 180
Score = 32.1 bits (71), Expect = 0.34
Identities = 25/160 (15%), Positives = 50/160 (31%), Gaps = 30/160 (18%)
Query: 192 DLRILDLSHNKLRTLGDYSGITKFRRLQNLH------------------------LENNE 227
L L+ N+L + + L L L N+
Sbjct: 30 HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGENK 89
Query: 228 ISQIAPNAFVALSSLRILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKL 287
I +I+ F+ L L+ LN+ N + + G F ++ + ++ + L
Sbjct: 90 IKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLN-LASNPFNCNCHLAWFA 148
Query: 288 EQLLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNELT 327
E L L+ + + + I +L ++E
Sbjct: 149 EWLRKKSLNGGAARCGAPSK-----VRDVQIKDLPHSEFK 183
Score = 31.3 bits (69), Expect = 0.49
Identities = 30/180 (16%), Positives = 59/180 (32%), Gaps = 9/180 (5%)
Query: 341 QRLDLRNNSIGYIEDNAFLSLYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSNNLLVN 400
+D + I + L L L++N + I++ G +
Sbjct: 11 TTVDCTGRGLKEIPRDIPLHTTEL---LLNDNELGRISSDGLFGRLPHLVKLELKRNQLT 67
Query: 401 IDSKAFKNCSALKELDLSSNAIVE--IPSALSELPFLKTLDLGENQISKIENGSFKNLQQ 458
++ + ++ L LKTL+L +NQIS + GSF++L
Sbjct: 68 GIEPNAFEGASHIQELQLGENKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNS 127
Query: 459 LTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKNKIHQIEIGTFEKNKRLAAIRLDSNFLT 518
L + +N N + + + L +L+ G K + + L +
Sbjct: 128 L-TSLNLASNPFNCNCHLAWFAEWLRKKSLNGG---AARCGAPSKVRDVQIKDLPHSEFK 183
>d1dcea3 c.10.2.2 (A:444-567) Rab geranylgeranyltransferase
alpha-subunit, C-terminal domain {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 56.6 bits (136), Expect = 4e-10
Identities = 26/126 (20%), Positives = 55/126 (43%), Gaps = 10/126 (7%)
Query: 318 ILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLHTIYLSENRIHHI 377
+L+L++ +LT + + L+ + LDL +N + + +L L + S+N + ++
Sbjct: 2 VLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALENV 58
Query: 378 TAHLFNGLYVLSKLTLSNNLLVNIDS-KAFKNCSALKELDLSSNAIVEIP----SALSEL 432
L +L L NN L + + +C L L+L N++ + L
Sbjct: 59 DGVANL--PRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEML 116
Query: 433 PFLKTL 438
P + ++
Sbjct: 117 PSVSSI 122
Score = 51.6 bits (123), Expect = 2e-08
Identities = 28/120 (23%), Positives = 49/120 (40%), Gaps = 5/120 (4%)
Query: 413 KELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGNL 472
+ L L+ + + L +L + LDL N++ + + L+ L L+ DN + N+
Sbjct: 1 RVLHLAHKDLTVLCH-LEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALENV 58
Query: 473 SSGMLYELPSLEVLNLSKNKIHQIE-IGTFEKNKRLAAIRLDSNFLTDINGVFTYLAQLL 531
+ L L N++ Q I RL + L N L G+ LA++L
Sbjct: 59 DGVANLPRL--QELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEML 116
Score = 51.3 bits (122), Expect = 3e-08
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 5/108 (4%)
Query: 391 LTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIEN 450
L L++ L + + + LDLS N + +P AL+ L L+ L +N + ++
Sbjct: 3 LHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD- 59
Query: 451 GSFKNLQQLTDLRLVDNNIGNLSS-GMLYELPSLEVLNLSKNKIHQIE 497
NL +L +L L +N + ++ L P L +LNL N + Q E
Sbjct: 60 -GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 106
Score = 49.3 bits (117), Expect = 1e-07
Identities = 22/124 (17%), Positives = 48/124 (38%), Gaps = 9/124 (7%)
Query: 129 QVLNISSSNIKSISDDVFCSLANIQTLNLSRNSIRD----IDTLGFAVRRASAESNSGEK 184
+VL+++ ++ + L + L+LS N +R + L ++++
Sbjct: 1 RVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENV 58
Query: 185 IECSGGMDLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIA---PNAFVALSS 241
+ L+ L L +N+L+ + RL L+L+ N + Q L S
Sbjct: 59 DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPS 118
Query: 242 LRIL 245
+ +
Sbjct: 119 VSSI 122
Score = 47.0 bits (111), Expect = 1e-06
Identities = 23/110 (20%), Positives = 45/110 (40%), Gaps = 6/110 (5%)
Query: 221 LHLENNEISQIAPNAFVALSSLRILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELS 280
LHL + +++ + L + L++S N L +LP L + +
Sbjct: 3 LHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVDG 60
Query: 281 RGLFHKLEQLLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNELTRID 330
+L++L L +N L + + + RL++LNL N L + +
Sbjct: 61 VANLPRLQEL---LLCNNRLQQSAAIQP-LVSCPRLVLLNLQGNSLCQEE 106
Score = 46.2 bits (109), Expect = 2e-06
Identities = 19/109 (17%), Positives = 37/109 (33%), Gaps = 2/109 (1%)
Query: 485 VLNLSKNKIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTYLAQLLWLNLSENHLVWFD 544
VL+L+ + + E+ + + L N L + L L L S+N L D
Sbjct: 2 VLHLAHKDLTVLC--HLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENVD 59
Query: 545 YAMVPGNLKWLDIHGNYISSLNNYYEIKDGLSIKNLDASHNRILEISEL 593
L+ L + N + + + L+ N + + +
Sbjct: 60 GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGI 108
Score = 41.2 bits (96), Expect = 1e-04
Identities = 29/151 (19%), Positives = 46/151 (30%), Gaps = 32/151 (21%)
Query: 243 RILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSS 302
R+L+++ L L +L + LDLS N L +
Sbjct: 1 RVLHLAHKDLTVLCH--------------------------LEQLLLVTHLDLSHNRLRA 34
Query: 303 NHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIED-NAFLSL 361
L L +L S+N L +D LQ L L NN + +S
Sbjct: 35 LP---PALAALRCLEVLQASDNALENVDGVANLP--RLQELLLCNNRLQQSAAIQPLVSC 89
Query: 362 YNLHTIYLSENRIHHITAHLFNGLYVLSKLT 392
L + L N + +L ++
Sbjct: 90 PRLVLLNLQGNSLCQEEGIQERLAEMLPSVS 120
Score = 40.5 bits (94), Expect = 2e-04
Identities = 25/107 (23%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 436 KTLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKNKIHQ 495
+ L L ++ + + + L +T L L N + L L L LEVL S N +
Sbjct: 1 RVLHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPPA-LAALRCLEVLQASDNALEN 57
Query: 496 IEIGTFEKNKRLAAIRLDSNFLTDINGV--FTYLAQLLWLNLSENHL 540
++ + + L +N L + +L+ LNL N L
Sbjct: 58 VDGVANLPRLQE--LLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSL 102
Score = 34.3 bits (78), Expect = 0.024
Identities = 16/106 (15%), Positives = 41/106 (38%), Gaps = 3/106 (2%)
Query: 533 LNLSENHLVWFDYAMVPGNLKWLDIHGNYISSLNNYYEIKDGLSIKNLDASHNRILEISE 592
L+L+ L + + LD+ N + +L + ++ L AS N + +
Sbjct: 3 LHLAHKDLTVLCHLEQLLLVTHLDLSHNRLRALPP--ALAALRCLEVLQASDNALENVDG 60
Query: 593 LSIPNSVEVLFINNNLIKSVK-PHTFFDKSNLARVDIYANDITKLD 637
++ ++ L + NN ++ L +++ N + + +
Sbjct: 61 VANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEE 106
Score = 33.1 bits (75), Expect = 0.067
Identities = 24/114 (21%), Positives = 36/114 (31%), Gaps = 24/114 (21%)
Query: 828 QVLHLENNLITHFYGYEFDNLEKLSELYLQENRIEYIANGTFN----------------- 870
+VLHL + +T + L ++ L L NR+ +
Sbjct: 1 RVLHLAHKDLTVL--CHLEQLLLVTHLDLSHNRLRALPPALAALRCLEVLQASDNALENV 58
Query: 871 ----ALISLQVLQLDGNRLKSFRAFD-LNTNSMLRKVYLGNNPFSCSCATLQEL 919
L LQ L L NRL+ A L + L + L N + L
Sbjct: 59 DGVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERL 112
Score = 32.8 bits (74), Expect = 0.072
Identities = 22/117 (18%), Positives = 35/117 (29%), Gaps = 26/117 (22%)
Query: 806 LYVNNSQIEVILNQTFNGLSSLQVLHLENNLITHFYGYEFDNLEKL-------------- 851
L++ + + V+ + L + L L +N + L L
Sbjct: 3 LHLAHKDLTVLCH--LEQLLLVTHLDLSHNRLRALPP-ALAALRCLEVLQASDNALENVD 59
Query: 852 --------SELYLQENRIEYIAN-GTFNALISLQVLQLDGNRLKSFRAFDLNTNSML 899
EL L NR++ A + L +L L GN L ML
Sbjct: 60 GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEML 116
Score = 32.4 bits (73), Expect = 0.12
Identities = 15/94 (15%), Positives = 32/94 (34%), Gaps = 1/94 (1%)
Query: 762 DCSEQQISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKNMLSLYVNNSQIE-VILNQT 820
D S ++ +PP + L + + L + N++++ Q
Sbjct: 26 DLSHNRLRALPPALAALRCLEVLQASDNALENVDGVANLPRLQELLLCNNRLQQSAAIQP 85
Query: 821 FNGLSSLQVLHLENNLITHFYGYEFDNLEKLSEL 854
L +L+L+ N + G + E L +
Sbjct: 86 LVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSV 119
>d1jl5a_ c.10.2.6 (A:) Leucine rich effector protein YopM {Yersinia
pestis [TaxId: 632]}
Length = 353
Score = 60.6 bits (145), Expect = 5e-10
Identities = 40/315 (12%), Positives = 91/315 (28%), Gaps = 16/315 (5%)
Query: 576 SIKNLDASHNRILEISELSIPNSVEVLFINNNLIKSVKPHTFFDKSNLARVDIYANDITK 635
L+ ++ + + EL P +E L + N + + +L + + N++
Sbjct: 39 QAHELELNNLGLSSLPEL--PPHLESLVASCNSLTELPELP----QSLKSLLVDNNNLKA 92
Query: 636 LDL--TALRLKPVPQNKTLPEFYLGGNPFDCDCSMDWLPIINNNTSPSMERQYPKIMDLD 693
L L V N+ L + F +D + P +
Sbjct: 93 LSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQL 152
Query: 694 NVVCKMTYSRGSTHLPASEAAPSQYLCPYDIHCFALCHCCEFDACDCEMTCPKNCSCFHD 753
+ ++ T + A + + + + P + + D
Sbjct: 153 EELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYAD 212
Query: 754 QNWNTNVVDCSEQQISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKNMLSLYVNNSQI 813
N + D + + TF + ++F G + +
Sbjct: 213 NNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNAS 272
Query: 814 EVILNQTFNGLSSLQVLHLENNLITHFYGYEFDNLEKLSELYLQENRIEYIANGTFNALI 873
+ + SL+ L++ NN + +L L N + +
Sbjct: 273 SNEIRSLCDLPPSLEELNVSNNKLIEL----PALPPRLERLIASFNHLAEVP----ELPQ 324
Query: 874 SLQVLQLDGNRLKSF 888
+L+ L ++ N L+ F
Sbjct: 325 NLKQLHVEYNPLREF 339
Score = 54.8 bits (130), Expect = 3e-08
Identities = 50/350 (14%), Positives = 98/350 (28%), Gaps = 20/350 (5%)
Query: 581 DASHNRILEISELS--IPNSVEVLFINNNLIKSVKPHTFFDKSNLARVDIYANDITKLD- 637
R + +S L + L +NN + S+ P +L + N +T+L
Sbjct: 20 GNGEQREMAVSRLRDCLDRQAHELELNNLGLSSL-PELP---PHLESLVASCNSLTELPE 75
Query: 638 -LTALRLKPVPQNKTLPEFYLGGNPFDCDCSMDWLPIINNNTSPSMERQYPKIMDLDNVV 696
+L+ V N L S + L + + KI+D+DN
Sbjct: 76 LPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEKLPEL----QNSSFLKIIDVDNNS 131
Query: 697 CKMTYSRGSTHLPASEAAPSQYLCPYDIHCFALCHCCEFDACDCEMTCPKNCSCFHDQNW 756
K + + P + L + ++
Sbjct: 132 LKKLPDLPPSLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGN 191
Query: 757 NTNVVDCSEQQISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKNMLSLYVNNSQIEVI 816
N Q + + + L +V L + +
Sbjct: 192 NILEELPELQNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDV 251
Query: 817 LNQTFNGLSSLQVLHLENNLITHFYGYEFDNLEKLSELYLQENRIEYIANGTFNALISLQ 876
F+GLS L N ++ D L EL + N++ + L+
Sbjct: 252 SENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPAL----PPRLE 307
Query: 877 VLQLDGNRLKSFRAFDLNTNSMLRKVYLGNNPFSCSCATLQELQTWIIDN 926
L N L N L+++++ NP + ++ +++
Sbjct: 308 RLIASFNHLAEVPELPQN----LKQLHVEYNPLREFPDIPESVEDLRMNS 353
Score = 52.1 bits (123), Expect = 3e-07
Identities = 39/353 (11%), Positives = 101/353 (28%), Gaps = 39/353 (11%)
Query: 529 QLLWLNLSENHLVWFDYAMVPGNLKWLDIHGNYISSLNNYYEIKDGLSIKNLDASHNRIL 588
Q L L+ L +P +L+ L N ++ L + S+K+L +N +
Sbjct: 39 QAHELELNNLGLSSLP--ELPPHLESLVASCNSLTELPELPQ-----SLKSLLVDNNNLK 91
Query: 589 EISELSIPNSVEVLFINNNLIKSVKPHTFFDKSNLARVDIYANDITKLDLTALRLKPVPQ 648
+S+L +L ++ S+ ++ N+ K
Sbjct: 92 ALSDL-----PPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIA 146
Query: 649 NKTLPEFYLGGNPFDCDCSMDWLPIINNNTSPSMERQYPKIMDLDNVVCKMTYSRGSTHL 708
L + + + P + I+ +N++ ++ + L
Sbjct: 147 AGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFL 206
Query: 709 PASEAAPSQYLCPYDIHCFALCHCCEFDACDCEMTCPKNCSCFHDQNWNTNVVDCSEQQI 768
+A + + N + + + +
Sbjct: 207 ---------------TTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDV 251
Query: 769 STVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKNMLSLYVNNSQIEVILNQTFNGLSSLQ 828
S + N + ++ L V+N+++ + L+
Sbjct: 252 SENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIEL----PALPPRLE 307
Query: 829 VLHLENNLITHFYGYEFDNLEKLSELYLQENRIEYIANGTFNALISLQVLQLD 881
L N + + + L +L+++ N + + S++ L+++
Sbjct: 308 RLIASFNHLAEV----PELPQNLKQLHVEYNPLREFPDI----PESVEDLRMN 352
Score = 49.8 bits (117), Expect = 1e-06
Identities = 17/92 (18%), Positives = 32/92 (34%), Gaps = 8/92 (8%)
Query: 345 LRNNSIGYIEDNAFLSLYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSK 404
N+ + +L + +S N++ + A L +L S N L +
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPALPPR----LERLIASFNHLAEVPE- 321
Query: 405 AFKNCSALKELDLSSNAIVEIPSALSELPFLK 436
LK+L + N + E P + L+
Sbjct: 322 ---LPQNLKQLHVEYNPLREFPDIPESVEDLR 350
Score = 49.4 bits (116), Expect = 2e-06
Identities = 39/342 (11%), Positives = 105/342 (30%), Gaps = 31/342 (9%)
Query: 126 RELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSIRDIDTLGFAVRRASAESNSGEKI 185
R+ L +++ + S+ + ++++L S NS+ ++ L +++ ++N+ + +
Sbjct: 38 RQAHELELNNLGLSSLPE----LPPHLESLVASCNSLTELPELPQSLKSLLVDNNNLKAL 93
Query: 186 ECSGGMDLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALSSLRIL 245
L S + + + +I + N +
Sbjct: 94 SD------------LPPLLEYLGVSNNQLEKLPELQNSSFLKIIDV-DNNSLKKLPDLPP 140
Query: 246 NISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHI 305
++ + +++ + A L + L ++ ++ +
Sbjct: 141 SLEFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPEL 200
Query: 306 DETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLH 365
F+ I L + D + L
Sbjct: 201 QNLPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLS 260
Query: 366 TIYLSENRIHHITAHLFNGLYVLSKLT---LSNNLLVNIDSKAFKNCSALKELDLSSNAI 422
+ + ++ + + + + L +SNN L+ + + L+ L S N +
Sbjct: 261 ELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPA----LPPRLERLIASFNHL 316
Query: 423 VEIPSALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRL 464
E+P LK L + N + + + + + DLR+
Sbjct: 317 AEVPELPQN---LKQLHVEYNPLREFPDI----PESVEDLRM 351
Score = 49.1 bits (115), Expect = 2e-06
Identities = 20/97 (20%), Positives = 39/97 (40%), Gaps = 11/97 (11%)
Query: 393 LSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIENGS 452
N N +L+EL++S+N ++E+P + P L+ L N ++++
Sbjct: 267 YYLNASSNEIRSLCDLPPSLEELNVSNNKLIELP---ALPPRLERLIASFNHLAEVPE-- 321
Query: 453 FKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLS 489
Q L L + N + S+E L ++
Sbjct: 322 --LPQNLKQLHVEYNPLREFPD----IPESVEDLRMN 352
Score = 43.7 bits (101), Expect = 1e-04
Identities = 58/343 (16%), Positives = 97/343 (28%), Gaps = 28/343 (8%)
Query: 216 RRLQNLHLENNEISQIAPNAFVALSSLRILNISSNHLVSLPEGLFSSCRDISEIYAQKNS 275
R+ L L N +S + L L S N L LPE S +
Sbjct: 38 RQAHELELNNLGLSSLPEL----PPHLESLVASCNSLTELPELPQSL---------KSLL 84
Query: 276 LVELSRGLFHKLEQLLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNELTRIDAKTFK 335
+ + L LL SN+ + L + + N S +L +
Sbjct: 85 VDNNNLKALSDLPPLLEYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEF 144
Query: 336 DLVFLQRLDLRNNSIGYIEDNAFLSLYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSN 395
+L+ A + N N L L +L
Sbjct: 145 IAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLP 204
Query: 396 NLLVNIDSKAFKNCSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIENGSFKN 455
L + L + +E + + F
Sbjct: 205 FL------TTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSG 258
Query: 456 LQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKNKIHQIEIGTFEKNKRLAAIRLDSN 515
L +L N N + PSLE LN+S NK+ ++ RL + N
Sbjct: 259 LSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELP----ALPPRLERLIASFN 314
Query: 516 FLTDINGVFTYLAQLLWLNLSENHLVWFDYAMVPGNLKWLDIH 558
L ++ + L L++ N L F +P +++ L ++
Sbjct: 315 HLAEVPEL---PQNLKQLHVEYNPLREFPD--IPESVEDLRMN 352
Score = 43.3 bits (100), Expect = 1e-04
Identities = 17/98 (17%), Positives = 38/98 (38%), Gaps = 12/98 (12%)
Query: 298 NHLSSNHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNA 357
+S++ + L LN+SNN+L + A + L+RL N + + +
Sbjct: 268 YLNASSNEIRSLCDLPPSLEELNVSNNKLIELPALPPR----LERLIASFNHLAEVPE-- 321
Query: 358 FLSLYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSN 395
NL +++ N + + + L +++
Sbjct: 322 --LPQNLKQLHVEYNPLREFPDIPES----VEDLRMNS 353
Score = 43.3 bits (100), Expect = 2e-04
Identities = 46/324 (14%), Positives = 95/324 (29%), Gaps = 23/324 (7%)
Query: 289 QLLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNN 348
Q L+L++ LSS + E L L S N LT + L+ L + NN
Sbjct: 39 QAHELELNNLGLSS--LPEL----PPHLESLVASCNSLTELPELPQS----LKSLLVDNN 88
Query: 349 SIGYIEDNAFLSLYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKN 408
++ + D L Y + L + + NN L +
Sbjct: 89 NLKALSDLPPLLEYLGV------SNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSL 142
Query: 409 CSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNN 468
+ + L + + S + + N
Sbjct: 143 EFIAAGNNQLEELPELQNLPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQN 202
Query: 469 IGNLSSGMLYELPSLEVLNLSKNKIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTYLA 528
+ L++ + +L + + + L +++
Sbjct: 203 LPFLTTIYADNNLLKTLPDLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSEL 262
Query: 529 QLLWLNLSENHLVWFDYAMVPGNLKWLDIHGNYISSLNNYYEIKDGLSIKNLDASHNRIL 588
L+ + +P +L+ L++ N + L ++ L AS N +
Sbjct: 263 PPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIELPALPP-----RLERLIASFNHLA 317
Query: 589 EISELSIPNSVEVLFINNNLIKSV 612
E+ EL P +++ L + N ++
Sbjct: 318 EVPEL--PQNLKQLHVEYNPLREF 339
Score = 41.0 bits (94), Expect = 7e-04
Identities = 45/382 (11%), Positives = 111/382 (29%), Gaps = 72/382 (18%)
Query: 458 QLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKNKIHQIEIGTFEKNKRLAAIRLDSNFL 517
Q +L L + + +L P LE L S N + ++
Sbjct: 39 QAHELELNNLGLSSLPE----LPPHLESLVASCNSLTELP-------------------- 74
Query: 518 TDINGVFTYLAQLLWLNLSENHLVWFDYAMVPGNLKWLDIHGNYISSLNNYYEIKDGLSI 577
+P +LK L + N + +L++ +
Sbjct: 75 -----------------------------ELPQSLKSLLVDNNNLKALSDLPP-----LL 100
Query: 578 KNLDASHNRILEISELSIPNSVEVLFINNNLIKSVKPHTFFDKSNLARVDIYANDITKLD 637
+ L S+N++ ++ EL + ++++ ++NN +K + + A + +
Sbjct: 101 EYLGVSNNQLEKLPELQNSSFLKIIDVDNNSLKKLPDLPPSLEFIAAGNNQLEELPELQN 160
Query: 638 LTALRLKPVPQNKTLPEFYLGGNPFDCDCSMDWLPIINNNTSPSMERQYPKIMDLDNVVC 697
L L N L + + L + + +L +
Sbjct: 161 LPFLTAIYADNNSLKKLPDLPLSLESIVAGNNILEELPELQNLPFLTTIYADNNLLKTLP 220
Query: 698 KMTYSRGSTHLPASEAAPSQYLCPYDIHCFALCHCCEFDACDCEMTCPKNCSCFHDQNW- 756
+ S + ++ + L + + N S ++
Sbjct: 221 DLPPSLEALNVRDNYLTDLPELPQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLC 280
Query: 757 ----NTNVVDCSEQQISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKNMLSLYVNNSQ 812
+ ++ S ++ +P P + N +P +N+ L+V +
Sbjct: 281 DLPPSLEELNVSNNKLIELPALPP-RLERLIASFNHLAEVPELP----QNLKQLHVEYNP 335
Query: 813 IEVILNQTFNGLSSLQVLHLEN 834
+ + S++ L + +
Sbjct: 336 LREFP----DIPESVEDLRMNS 353
Score = 39.4 bits (90), Expect = 0.002
Identities = 15/80 (18%), Positives = 34/80 (42%), Gaps = 6/80 (7%)
Query: 146 FCSLANIQTLNLSRNSIRDIDTLGFAVRRASAESNSGEKIECSGGMDLRILDLSHNKLRT 205
+++ LN+S N + ++ L + R A N ++ +L+ L + +N LR
Sbjct: 280 CDLPPSLEELNVSNNKLIELPALPPRLERLIASFNHLAEVPELPQ-NLKQLHVEYNPLRE 338
Query: 206 LGDYSGITKFRRLQNLHLEN 225
D +++L + +
Sbjct: 339 FPDI-----PESVEDLRMNS 353
Score = 38.3 bits (87), Expect = 0.005
Identities = 14/64 (21%), Positives = 28/64 (43%), Gaps = 7/64 (10%)
Query: 409 CSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNN 468
EL+L++ + +P P L++L N ++++ Q L L + +NN
Sbjct: 37 DRQAHELELNNLGLSSLP---ELPPHLESLVASCNSLTELPE----LPQSLKSLLVDNNN 89
Query: 469 IGNL 472
+ L
Sbjct: 90 LKAL 93
Score = 34.4 bits (77), Expect = 0.079
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 16/94 (17%)
Query: 60 SSITTKSFQNIYSLEELKISNCKLVELPVDVFSGLRNLKRLTINTRNLQWDKSKKLDLVP 119
S+ SLEEL +SN KL+ELP + L+RL + L VP
Sbjct: 273 SNEIRSLCDLPPSLEELNVSNNKLIELP----ALPPRLERLIAS--------FNHLAEVP 320
Query: 120 GSLDGLRELQVLNISSSNIKSISDDVFCSLANIQ 153
L++ L++ + ++ D+ S+ +++
Sbjct: 321 ELPQNLKQ---LHVEYNPLREF-PDIPESVEDLR 350
>d1koha1 c.10.2.3 (A:201-362) mRNA export factor tap {Human (Homo
sapiens) [TaxId: 9606]}
Length = 162
Score = 56.0 bits (134), Expect = 2e-09
Identities = 24/154 (15%), Positives = 54/154 (35%), Gaps = 14/154 (9%)
Query: 344 DLRNNSIGYIEDNAFLSLYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSNNLLVNIDS 403
+L+ + ++ Y+ L + + L +++ +
Sbjct: 3 ELKPEQVEQLK-LIMSKRYDGSQQALDLKGLRSDPD--LVAQNIDVVLNRRSSMAATLR- 58
Query: 404 KAFKNCSALKELDLSSNAIV---EIPSALSELPFLKTLDLGENQISKIENGSFKNLQQLT 460
+N L L+LS+N + ++ S + + P LK L+L N++ +L
Sbjct: 59 IIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLE 118
Query: 461 DLRLVDNNIGNLSSG-------MLYELPSLEVLN 487
+L L N++ + + P L L+
Sbjct: 119 ELWLDGNSLSDTFRDQSTYISAIRERFPKLLRLD 152
Score = 47.5 bits (112), Expect = 1e-06
Identities = 29/129 (22%), Positives = 51/129 (39%), Gaps = 4/129 (3%)
Query: 222 HLENNEISQIAPNAFVALSSLRILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSR 281
L+ ++ Q+ + L S P+ ++I + +++S+ R
Sbjct: 3 ELKPEQVEQL-KLIMSKRYDGSQQALDLKGLRSDPD---LVAQNIDVVLNRRSSMAATLR 58
Query: 282 GLFHKLEQLLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQ 341
+ + +LL L+LS+N L + L ILNLS NEL + L+
Sbjct: 59 IIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLE 118
Query: 342 RLDLRNNSI 350
L L NS+
Sbjct: 119 ELWLDGNSL 127
Score = 45.2 bits (106), Expect = 9e-06
Identities = 30/132 (22%), Positives = 44/132 (33%), Gaps = 6/132 (4%)
Query: 192 DLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALSSLRILNISSNH 251
D L LR+ D L + I N + L LN+S+N
Sbjct: 21 DGSQQALDLKGLRSDPDLVAQNIDVVLNRRSSMAATLRIIEEN----IPELLSLNLSNNR 76
Query: 252 LVSLPE--GLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHIDETT 309
L L + + ++ + N L K +L L L N LS D++T
Sbjct: 77 LYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQST 136
Query: 310 FIGLIRLIILNL 321
+I IR L
Sbjct: 137 YISAIRERFPKL 148
Score = 44.4 bits (104), Expect = 2e-05
Identities = 25/126 (19%), Positives = 42/126 (33%), Gaps = 5/126 (3%)
Query: 778 DATHVYLDGNTFKTIPNHVFIGRKNMLSLYVNNSQIEVILNQTFNGLSSLQVLHLENNLI 837
D + LD ++ P+ + + + L +S L + L L+L NN +
Sbjct: 21 DGSQQALDLKGLRSDPD--LVAQNIDVVLNRRSSMAA-TLRIIEENIPELLSLNLSNNRL 77
Query: 838 THFYG--YEFDNLEKLSELYLQENRIEYIANGTFNALISLQVLQLDGNRLKSFRAFDLNT 895
L L L N ++ + L+ L LDGN L
Sbjct: 78 YRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTY 137
Query: 896 NSMLRK 901
S +R+
Sbjct: 138 ISAIRE 143
Score = 43.7 bits (102), Expect = 2e-05
Identities = 29/133 (21%), Positives = 53/133 (39%), Gaps = 14/133 (10%)
Query: 412 LKELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGN 471
+ LDL L L+ + + + +N+ +L L L +N +
Sbjct: 24 QQALDLKGLRSDPD---LVAQNIDVVLNRRSSMAATLR-IIEENIPELLSLNLSNNRLYR 79
Query: 472 LS--SGMLYELPSLEVLNLSKNKIHQIEIGTFEKNKRLAAIRLDSNFLTDING------- 522
L S ++ + P+L++LNLS N++ K +L + LD N L+D
Sbjct: 80 LDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYIS 139
Query: 523 -VFTYLAQLLWLN 534
+ +LL L+
Sbjct: 140 AIRERFPKLLRLD 152
Score = 37.1 bits (85), Expect = 0.004
Identities = 19/108 (17%), Positives = 37/108 (34%), Gaps = 6/108 (5%)
Query: 67 FQNIYSLEELKISNCKLVELPVDVFSGLRNLKRLTINTRNLQWDKSKKLDLVPGSLDGLR 126
L + L + + + L L NL ++ +LD + +
Sbjct: 38 LVAQNIDVVLNRRSSMAATLRI-IEENIPELLSL-----NLSNNRLYRLDDMSSIVQKAP 91
Query: 127 ELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSIRDIDTLGFAVRR 174
L++LN+S + +KS + ++ L L NS+ D
Sbjct: 92 NLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRDQSTYIS 139
Score = 36.7 bits (84), Expect = 0.006
Identities = 25/134 (18%), Positives = 45/134 (33%), Gaps = 9/134 (6%)
Query: 481 PSLEVLNLSKNKIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTYLAQLLWLNLSENHL 540
S + L+L + + S+ + + + +LL LNLS N L
Sbjct: 22 GSQQALDLKGLRSDPD----LVAQNIDVVLNRRSSMAATLRIIEENIPELLSLNLSNNRL 77
Query: 541 VWFDYAMVPG----NLKWLDIHGNYISSLNNYYEIKDGLSIKNLDASHNRILEISELSIP 596
D NLK L++ GN + S + GL ++ L N + +
Sbjct: 78 YRLDDMSSIVQKAPNLKILNLSGNELKSERE-LDKIKGLKLEELWLDGNSLSDTFRDQST 136
Query: 597 NSVEVLFINNNLIK 610
+ L++
Sbjct: 137 YISAIRERFPKLLR 150
Score = 36.3 bits (83), Expect = 0.008
Identities = 22/132 (16%), Positives = 46/132 (34%), Gaps = 8/132 (6%)
Query: 266 ISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHIDET---TFIGLIRLIILNLS 322
+S+ Y ++L L+ ++ + + T + L+ LNLS
Sbjct: 16 MSKRYDGSQQALDLKG--LRSDPDLVAQNIDVVLNRRSSMAATLRIIEENIPELLSLNLS 73
Query: 323 NNELTRIDA--KTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLHTIYLSENRIHHITAH 380
NN L R+D + L+ L+L N + + + L ++L N +
Sbjct: 74 NNRLYRLDDMSSIVQKAPNLKILNLSGNELKSERELDKIKGLKLEELWLDGNSLSDTFRD 133
Query: 381 LFNGL-YVLSKL 391
+ + +
Sbjct: 134 QSTYISAIRERF 145
>d1z7xw1 c.10.1.1 (W:1-460) Ribonuclease inhibitor {Human (Homo
sapiens) [TaxId: 9606]}
Length = 460
Score = 59.2 bits (141), Expect = 2e-09
Identities = 59/497 (11%), Positives = 129/497 (25%), Gaps = 61/497 (12%)
Query: 435 LKTLDLGENQISKIE-NGSFKNLQQLTDLRLVDNNIGNLS----SGMLYELPSLEVLNLS 489
+++LD+ ++S LQQ +RL D + S L P+L LNL
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 490 KNKIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTYLAQLLWLNLSENHLVWFDYAMVP 549
N++ + + + G+ T ++ L+L L ++
Sbjct: 64 SNELGDVGVHCV------------------LQGLQTPSCKIQKLSLQNCCLTGAGCGVLS 105
Query: 550 GNLKWLDIHGNYISSLNNYYEIKDGLSIKNLDASHNRILEISELSIPNSVEVLFINNNLI 609
L+ L S N + L + L R+ ++ S +++
Sbjct: 106 STLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVL 165
Query: 610 KSVKPHTFFDKSNLARVDIYANDITKLDLTALRLKPVPQNKTLPEFYLGGNPFDCDCSMD 669
++ SN + + + + + ++ +
Sbjct: 166 RAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASK 225
Query: 670 WLPIINNNTSPSMERQYPKIMDLDNVVCKMTYSRGSTHLPASEAAPSQYLCPYDIHCFAL 729
S + + + A LC +L
Sbjct: 226 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESL 285
Query: 730 CHCCEFDACDCEMTCPKNCSCFHDQNWNTNVVDCSEQQISTVPPRIPMDATHVYLDGNTF 789
+ C + + +
Sbjct: 286 KELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSSVLA-------- 337
Query: 790 KTIPNHVFIGRKNMLSLYVNNSQIEVILNQTFNGLSSLQVLHLENNLITHFYGYEFDNLE 849
+ F+ + + + ++ + + S L+VL L + ++
Sbjct: 338 ----QNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVS----------- 382
Query: 850 KLSELYLQENRIEYIANGTFNALISLQVLQLDGNRLKSFRAFDL-----NTNSMLRKVYL 904
++ +A A SL+ L L N L L +L ++ L
Sbjct: 383 --------DSSCSSLAAT-LLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVL 433
Query: 905 GNNPFSC-SCATLQELQ 920
+ +S LQ L+
Sbjct: 434 YDIYWSEEMEDRLQALE 450
Score = 48.8 bits (114), Expect = 3e-06
Identities = 42/468 (8%), Positives = 117/468 (25%), Gaps = 49/468 (10%)
Query: 388 LSKLTLSNNLLVNID-SKAFKNCSALKELDLSSNAI-----VEIPSALSELPFLKTLDLG 441
+ L + L + ++ + + L + +I SAL P L L+L
Sbjct: 4 IQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLR 63
Query: 442 ENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKNKIHQIEIGTF 501
N++ D + + G+ ++ L+L + G
Sbjct: 64 SNELG-------------------DVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVL 104
Query: 502 EKNKRLAAIRLDSNFLTDINGVFTYLAQLLWLNLSENHLVWFDYAMVPGNLKWLDIHGNY 561
R + + ++ G L + L + + +
Sbjct: 105 SSTLRTLPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASV 164
Query: 562 ISSLNNYYEIKDGLSIKNLDASHNRILEISELSIPNSVEVLFINNNLIKSVKPHTFFDK- 620
+ + ++ E+ + N + + L + +
Sbjct: 165 LRAKPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVAS 224
Query: 621 -SNLARVDIYANDITKLDLTALRLKPVPQNKTLPEFYLGGNPFDCDCSMDWLPIINNNTS 679
++L + + +N + + + L + + L ++ D ++ S
Sbjct: 225 KASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKES 284
Query: 680 PSMERQYPKIMDLDNVVCKMTYSRGSTHLPASEAAPSQYLCPYDIHCFALCHCCEFDACD 739
+ + + C + C
Sbjct: 285 LKELSLAGNELGDEGARLLCET-------------LLEPGCQLESLWVKSCSFTAACCSH 331
Query: 740 CEMTCPKNCSCFHDQNWNTNVVDCSEQQISTVPPRIPMDATHVYLDGNTFKTIPN----H 795
+N Q N + D +++ + ++L
Sbjct: 332 FSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAA 391
Query: 796 VFIGRKNMLSLYVNNSQI-----EVILNQTFNGLSSLQVLHLENNLIT 838
+ ++ L ++N+ + ++ L+ L L + +
Sbjct: 392 TLLANHSLRELDLSNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWS 439
Score = 45.4 bits (105), Expect = 4e-05
Identities = 20/95 (21%), Positives = 32/95 (33%), Gaps = 14/95 (14%)
Query: 406 FKNCSALKELDLSSNAI-----VEIPSALSELPFLKTLDLGENQIS-----KIENGSFKN 455
+ S L+ L L+ + + + L L+ LDL N + ++ +
Sbjct: 365 GQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQP 424
Query: 456 LQQLTDLRLVDNNIGNLSSGMLYEL----PSLEVL 486
L L L D L L PSL V+
Sbjct: 425 GCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVI 459
Score = 45.0 bits (104), Expect = 5e-05
Identities = 17/113 (15%), Positives = 40/113 (35%), Gaps = 23/113 (20%)
Query: 191 MDLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIA----PNAFVALSSLRILN 246
+D++ LD+ +L + ++ Q + L++ +++ +A +L LN
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 61
Query: 247 ISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNH 299
+ SN L + + +GL ++ L L +
Sbjct: 62 LRSNEL-------------------GDVGVHCVLQGLQTPSCKIQKLSLQNCC 95
Score = 41.1 bits (94), Expect = 8e-04
Identities = 17/96 (17%), Positives = 31/96 (32%), Gaps = 10/96 (10%)
Query: 290 LLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNELTRIDAKT----FKDLVFLQRLDL 345
+ LD+ LS E L + ++ L + LT K + L L+L
Sbjct: 4 IQSLDIQCEELSDARWAEL-LPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 346 RNNSIG-----YIEDNAFLSLYNLHTIYLSENRIHH 376
R+N +G + + + L +
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTG 98
Score = 39.2 bits (89), Expect = 0.003
Identities = 20/107 (18%), Positives = 39/107 (36%), Gaps = 10/107 (9%)
Query: 362 YNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSNNLLVNID----SKAFKNCSALKELDL 417
+ L + + + L VL L L++ + + + +L+ELDL
Sbjct: 345 LQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDL 404
Query: 418 SSNAI-VEIPSALSE-----LPFLKTLDLGENQISKIENGSFKNLQQ 458
S+N + L E L+ L L + S+ + L++
Sbjct: 405 SNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEK 451
Score = 38.8 bits (88), Expect = 0.005
Identities = 20/88 (22%), Positives = 33/88 (37%), Gaps = 7/88 (7%)
Query: 281 RGLFHKLEQLLVLDLSSNHLSSNHIDE--TTFIGLIRLIILNLSNNELTRIDAKTFKDLV 338
+GL L VL L+ +S + T + L L+LSNN L + V
Sbjct: 362 QGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESV 421
Query: 339 F-----LQRLDLRNNSIGYIEDNAFLSL 361
L++L L + ++ +L
Sbjct: 422 RQPGCLLEQLVLYDIYWSEEMEDRLQAL 449
Score = 37.3 bits (84), Expect = 0.014
Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 10/88 (11%)
Query: 319 LNLSNNELTRID-AKTFKDLVFLQRLDLRNNSIGYIE----DNAFLSLYNLHTIYLSENR 373
L++ EL+ A+ L Q + L + + +A L + L N
Sbjct: 7 LDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNLRSNE 66
Query: 374 I-----HHITAHLFNGLYVLSKLTLSNN 396
+ H + L + KL+L N
Sbjct: 67 LGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
Score = 36.9 bits (83), Expect = 0.017
Identities = 15/93 (16%), Positives = 35/93 (37%), Gaps = 9/93 (9%)
Query: 72 SLEELKISNCKLVELPV-DVFSGLRNLKRLTINTRNLQWDKSKKLDLVPGSLDGLRELQV 130
++ L I +L + ++ L+ + + ++ L + K + +L L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDI---SSALRVNPALAE 59
Query: 131 LNISSSNI-----KSISDDVFCSLANIQTLNLS 158
LN+ S+ + + + IQ L+L
Sbjct: 60 LNLRSNELGDVGVHCVLQGLQTPSCKIQKLSLQ 92
Score = 36.5 bits (82), Expect = 0.020
Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 14/102 (13%)
Query: 187 CSGGMDLRILDLSHNKLRTLGDY---SGITKFRRLQNLHLENNEISQIAPNAFVA----- 238
G LR+L L+ + + + L+ L L NN + V
Sbjct: 365 GQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQLVESVRQP 424
Query: 239 LSSLRILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELS 280
L L + + + + K SL +S
Sbjct: 425 GCLLEQLVLYDIYWSE------EMEDRLQALEKDKPSLRVIS 460
Score = 35.3 bits (79), Expect = 0.047
Identities = 16/92 (17%), Positives = 32/92 (34%), Gaps = 10/92 (10%)
Query: 802 NMLSLYVNNSQI-EVILNQTFNGLSSLQVLHLENNLIT----HFYGYEFDNLEKLSELYL 856
++ SL + ++ + + L QV+ L++ +T L+EL L
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 857 QENRI-----EYIANGTFNALISLQVLQLDGN 883
+ N + + G +Q L L
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
Score = 35.0 bits (78), Expect = 0.059
Identities = 15/92 (16%), Positives = 30/92 (32%), Gaps = 9/92 (9%)
Query: 303 NHIDETTFIGLIRLIILNLSNNELTRID----AKTFKDLVFLQRLDLRNNSIG-----YI 353
+ + L +L L++ +++ A T L+ LDL NN +G +
Sbjct: 358 RELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCLGDAGILQL 417
Query: 354 EDNAFLSLYNLHTIYLSENRIHHITAHLFNGL 385
++ L + L + L
Sbjct: 418 VESVRQPGCLLEQLVLYDIYWSEEMEDRLQAL 449
Score = 35.0 bits (78), Expect = 0.061
Identities = 13/104 (12%), Positives = 35/104 (33%), Gaps = 15/104 (14%)
Query: 127 ELQVLNISSSNIKSIS-DDVFCSLANIQTLNLSRNSIRDIDTLGFAVRRASAESNSGEKI 185
++Q L+I + ++ L Q + L + + + ++ N
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDIS---SALRVNP---- 55
Query: 186 ECSGGMDLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEIS 229
L L+L N+L +G + + + + ++ +
Sbjct: 56 ------ALAELNLRSNELGDVG-VHCVLQGLQTPSCKIQKLSLQ 92
Score = 35.0 bits (78), Expect = 0.067
Identities = 21/92 (22%), Positives = 34/92 (36%), Gaps = 8/92 (8%)
Query: 265 DISEIYAQKNSLVELS-RGLFHKLEQLLVLDLSSNHLSSNHIDE--TTFIGLIRLIILNL 321
DI + Q L + L L+Q V+ L L+ + + L LNL
Sbjct: 3 DIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELNL 62
Query: 322 SNNELTRIDAKTFKDLVF-----LQRLDLRNN 348
+NEL + + +Q+L L+N
Sbjct: 63 RSNELGDVGVHCVLQGLQTPSCKIQKLSLQNC 94
Score = 34.2 bits (76), Expect = 0.13
Identities = 24/115 (20%), Positives = 41/115 (35%), Gaps = 21/115 (18%)
Query: 139 KSISDDVFCSLANIQTLNLSRNSIRDIDTLGFAVRRASAESNSGEKIECSGGMDLRILDL 198
+ + + + ++ L L+ + D A + S LR LDL
Sbjct: 358 RELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHS-------------LRELDL 404
Query: 199 SHNKLRTLGDYSGITKFR----RLQNLHLENNEISQIAPNAFVALS----SLRIL 245
S+N L G + R L+ L L + S+ + AL SLR++
Sbjct: 405 SNNCLGDAGILQLVESVRQPGCLLEQLVLYDIYWSEEMEDRLQALEKDKPSLRVI 459
Score = 33.8 bits (75), Expect = 0.14
Identities = 17/91 (18%), Positives = 31/91 (34%), Gaps = 23/91 (25%)
Query: 215 FRRLQNLHLENNEISQIA----PNAFVALSSLRILNISSNHLVSLPEGLFSSCRDISEIY 270
L+ L L + ++S + +A SLR L++S+N L
Sbjct: 368 GSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNCL------------------ 409
Query: 271 AQKNSLVELSRGLFHKLEQLLVLDLSSNHLS 301
+++L + L L L + S
Sbjct: 410 -GDAGILQLVESVRQPGCLLEQLVLYDIYWS 439
Score = 29.6 bits (64), Expect = 3.0
Identities = 12/196 (6%), Positives = 46/196 (23%), Gaps = 7/196 (3%)
Query: 575 LSIKNLDASHNRILEISELSIPNSV---EVLFINNNLIKSVKPHTFFD----KSNLARVD 627
L I++LD + + + + +V+ +++ + + LA ++
Sbjct: 2 LDIQSLDIQCEELSDARWAELLPLLQQCQVVRLDDCGLTEARCKDISSALRVNPALAELN 61
Query: 628 IYANDITKLDLTALRLKPVPQNKTLPEFYLGGNPFDCDCSMDWLPIINNNTSPSMERQYP 687
+ +N++ + + + + + + L + +
Sbjct: 62 LRSNELGDVGVHCVLQGLQTPSCKIQKLSLQNCCLTGAGCGVLSSTLRTLPTLQELHLSD 121
Query: 688 KIMDLDNVVCKMTYSRGSTHLPASEAAPSQYLCPYDIHCFALCHCCEFDACDCEMTCPKN 747
++ + L A + D + ++
Sbjct: 122 NLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDI 181
Query: 748 CSCFHDQNWNTNVVDC 763
Sbjct: 182 NEAGVRVLCQGLKDSP 197
>d1a9na_ c.10.2.4 (A:) Splicesomal U2A' protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 162
Score = 55.3 bits (132), Expect = 3e-09
Identities = 33/150 (22%), Positives = 63/150 (42%), Gaps = 9/150 (6%)
Query: 393 LSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIENGS 452
L+ L+ + N +ELDL I I + + L +D +N+I K++
Sbjct: 3 LTAELIEQAAQ--YTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFP 60
Query: 453 FKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKNKIHQIEIGTFEKN-KRLAAIR 511
L++L L + +N I + G+ LP L L L+ N + ++ + K L +
Sbjct: 61 --LLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLC 118
Query: 512 LDSNFLTDING----VFTYLAQLLWLNLSE 537
+ N +T+ V + Q+ L+ +
Sbjct: 119 ILRNPVTNKKHYRLYVIYKVPQVRVLDFQK 148
Score = 48.0 bits (113), Expect = 1e-06
Identities = 35/141 (24%), Positives = 62/141 (43%), Gaps = 5/141 (3%)
Query: 330 DAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLHTIYLSENRIHHITAHLFNGLYVLS 389
A + + V + LDLR I IE N +L I S+N I + L L
Sbjct: 10 QAAQYTNAVRDRELDLRGYKIPVIE-NLGATLDQFDAIDFSDNEIRKLDGF--PLLRRLK 66
Query: 390 KLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIP--SALSELPFLKTLDLGENQISK 447
L ++NN + I + L EL L++N++VE+ L+ L L L + N ++
Sbjct: 67 TLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTN 126
Query: 448 IENGSFKNLQQLTDLRLVDNN 468
++ + ++ +R++D
Sbjct: 127 KKHYRLYVIYKVPQVRVLDFQ 147
Score = 39.2 bits (90), Expect = 0.001
Identities = 20/149 (13%), Positives = 40/149 (26%), Gaps = 4/149 (2%)
Query: 198 LSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALSSLRILNISSNHLVSLPE 257
L+ + Y+ + + L L +I I N L ++ S N + L
Sbjct: 3 LTAELIEQAAQYTNAVR---DRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKLDG 58
Query: 258 GLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHIDETTFIGLIRLI 317
+ + + L+L +S + + L L
Sbjct: 59 FPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLC 118
Query: 318 ILNLSNNELTRIDAKTFKDLVFLQRLDLR 346
IL + ++ LD +
Sbjct: 119 ILRNPVTNKKHYRLYVIYKVPQVRVLDFQ 147
Score = 36.5 bits (83), Expect = 0.009
Identities = 14/65 (21%), Positives = 22/65 (33%), Gaps = 3/65 (4%)
Query: 832 LENNLITHFYGYEFDNLEKLSELYLQENRIEYIANGTFNALISLQVLQLDGNRLKSFRAF 891
L LI ++ N + EL L+ +I I N L + N ++ F
Sbjct: 3 LTAELIEQ--AAQYTNAVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKLDGF 59
Query: 892 DLNTN 896
L
Sbjct: 60 PLLRR 64
Score = 36.1 bits (82), Expect = 0.010
Identities = 26/134 (19%), Positives = 50/134 (37%), Gaps = 9/134 (6%)
Query: 121 SLDGLRELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSIRDIDTLGFAVRRASAESN 180
+ L++ I I +++ +L ++ S N IR +D R + N
Sbjct: 13 QYTNAVRDRELDLRGYKIPVI-ENLGATLDQFDAIDFSDNEIRKLDGFPLLRRLKTLLVN 71
Query: 181 SGEKIECSGGM-----DLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIA--- 232
+ G+ DL L L++N L LGD + + L L + N ++
Sbjct: 72 NNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKKHYR 131
Query: 233 PNAFVALSSLRILN 246
+ +R+L+
Sbjct: 132 LYVIYKVPQVRVLD 145
Score = 34.5 bits (78), Expect = 0.031
Identities = 16/77 (20%), Positives = 28/77 (36%), Gaps = 2/77 (2%)
Query: 488 LSKNKIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTYLAQLLWLNLSENHLVWFDYAM 547
L+ I Q + R + L + I + L Q ++ S+N + D
Sbjct: 3 LTAELIEQA--AQYTNAVRDRELDLRGYKIPVIENLGATLDQFDAIDFSDNEIRKLDGFP 60
Query: 548 VPGNLKWLDIHGNYISS 564
+ LK L ++ N I
Sbjct: 61 LLRRLKTLLVNNNRICR 77
Score = 32.2 bits (72), Expect = 0.19
Identities = 27/155 (17%), Positives = 62/155 (40%), Gaps = 12/155 (7%)
Query: 66 SFQNIYSLEELKISNCKLVELPVDVFSGLRNLKRLTINTRNLQWDKSKKLDLVPGSLDGL 125
+ N EL + K+ + ++ + L + + ++ +KLD P L
Sbjct: 13 QYTNAVRDRELDLRGYKIPVIE-NLGATLDQFDAI-----DFSDNEIRKLDGFP----LL 62
Query: 126 RELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSIRDIDTLGFAVRRASAESNSGEKI 185
R L+ L ++++ I I + + +L ++ L L+ NS+ ++ L S +
Sbjct: 63 RRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRN 122
Query: 186 ECSGGMDLRILDLSH-NKLRTLGDYSGITKFRRLQ 219
+ R+ + ++R L D+ + R +
Sbjct: 123 PVTNKKHYRLYVIYKVPQVRVL-DFQKVKLKERQE 156
Score = 31.4 bits (70), Expect = 0.36
Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 3/92 (3%)
Query: 820 TFNGLSSLQVLHLENNLITHFYGYEFDNLEKLSELYLQENRIEYIANGTFNALISLQVLQ 879
+ + L L I L++ + +N I + F L L+ L
Sbjct: 13 QYTNAVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKLDG--FPLLRRLKTLL 69
Query: 880 LDGNRLKSFRAFDLNTNSMLRKVYLGNNPFSC 911
++ NR+ L ++ L NN
Sbjct: 70 VNNNRICRIGEGLDQALPDLTELILTNNSLVE 101
Score = 31.1 bits (69), Expect = 0.55
Identities = 24/118 (20%), Positives = 43/118 (36%), Gaps = 6/118 (5%)
Query: 549 PGNLKWLDIHGNYISSLNNYYEIKDGLSIKNLDASHNRILEISELSIPNSVEVLFINNNL 608
+ LD+ G I + N D +D S N I ++ + ++ L +NNN
Sbjct: 17 AVRDRELDLRGYKIPVIENLGATLDQF--DAIDFSDNEIRKLDGFPLLRRLKTLLVNNNR 74
Query: 609 IKSVKPHTFFDKSNLARVDIYANDITKLDLTALRLKPVPQNKTLPEFYLGGNPFDCDC 666
I + +L + + N + +L L P+ K+L + NP
Sbjct: 75 ICRIGEGLDQALPDLTELILTNNSLVELG----DLDPLASLKSLTYLCILRNPVTNKK 128
Score = 29.1 bits (64), Expect = 2.4
Identities = 28/118 (23%), Positives = 40/118 (33%), Gaps = 4/118 (3%)
Query: 797 FIGRKNMLSLYVNNSQIEVILNQTFNGLSSLQVLHLENNLITHFYGYEFDNLEKLSELYL 856
+ L + +I VI N L + +N I G+ L +L L +
Sbjct: 14 YTNAVRDRELDLRGYKIPVIEN-LGATLDQFDAIDFSDNEIRKLDGFP--LLRRLKTLLV 70
Query: 857 QENRIEYIANGTFNALISLQVLQLDGNRLKSFRAFDLNTN-SMLRKVYLGNNPFSCSC 913
NRI I G AL L L L N L D + L + + NP +
Sbjct: 71 NNNRICRIGEGLDQALPDLTELILTNNSLVELGDLDPLASLKSLTYLCILRNPVTNKK 128
>d1xwdc1 c.10.2.7 (C:18-259) Follicle-stimulating hormone receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 242
Score = 51.4 bits (121), Expect = 2e-07
Identities = 41/252 (16%), Positives = 79/252 (31%), Gaps = 19/252 (7%)
Query: 187 CSGGMDLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALSSLRI-- 244
CS R+ +K+ + S + R L ++ I AF L
Sbjct: 8 CSN----RVFLCQESKVTEIP--SDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIE 59
Query: 245 LNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSSNH 304
++ + V + + + + N+L+ ++ F L L L +S+ +
Sbjct: 60 ISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLP 119
Query: 305 IDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNL 364
L+ + + N T L L N I I + AF
Sbjct: 120 DVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLD 179
Query: 365 HTIYLSENRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVE 424
N + + +F+G L +S + ++ S +N L+ +
Sbjct: 180 ELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYN----- 234
Query: 425 IPSALSELPFLK 436
L +LP L+
Sbjct: 235 ----LKKLPTLE 242
Score = 49.1 bits (115), Expect = 1e-06
Identities = 39/247 (15%), Positives = 75/247 (30%), Gaps = 16/247 (6%)
Query: 241 SLRILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHL 300
S R+ + + +P L + E+ L + +G F L +++S N +
Sbjct: 9 SNRVFLCQESKVTEIPSDLPRN---AIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDV 65
Query: 301 S--SNHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAF 358
+ L + I +N +A + +
Sbjct: 66 LEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIH 125
Query: 359 LSLYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLS 418
L I + N + L L+ N + I + AF +
Sbjct: 126 SLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSD 185
Query: 419 SNAIVEIP-SALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGML 477
+N + E+P LD+ +I + + +NL++L + NL
Sbjct: 186 NNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRAR-----STYNLKK--- 237
Query: 478 YELPSLE 484
LP+LE
Sbjct: 238 --LPTLE 242
Score = 48.8 bits (114), Expect = 1e-06
Identities = 21/215 (9%), Positives = 48/215 (22%), Gaps = 8/215 (3%)
Query: 621 SNLARVDIYANDITKLDLTALRLKPVPQNKTLPEFYLGGNPFDCDCSMDWLPIINNNTSP 680
N + + + A + + + + S
Sbjct: 29 RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 88
Query: 681 SMERQYPKIMDLDNVVCKMTYSRGSTHLPASEAAPSQYLCPYDIHCFALCHCCEFDACDC 740
+ + + S + IH D +
Sbjct: 89 NNLLYINPEAFQNLPNLQYLLI--------SNTGIKHLPDVHKIHSLQKVLLDIQDNINI 140
Query: 741 EMTCPKNCSCFHDQNWNTNVVDCSEQQISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGR 800
+ ++ + Q+I D N + +PN VF G
Sbjct: 141 HTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGA 200
Query: 801 KNMLSLYVNNSQIEVILNQTFNGLSSLQVLHLENN 835
+ L ++ ++I + + L L+ N
Sbjct: 201 SGPVILDISRTRIHSLPSYGLENLKKLRARSTYNL 235
Score = 48.0 bits (112), Expect = 3e-06
Identities = 23/225 (10%), Positives = 57/225 (25%), Gaps = 5/225 (2%)
Query: 634 TKLDLTALRLKPVPQN--KTLPEFYLGGNPFDCDCSMDWLPIINNNTSPSMERQYPKIMD 691
++ +P + + E + +E +++
Sbjct: 11 RVFLCQESKVTEIPSDLPRNAIELRFVLTKLR---VIQKGAFSGFGDLEKIEISQNDVLE 67
Query: 692 LDNVVCKMTYSRGSTHLPASEAAPSQYLCPYDIHCFALCHCCEFDACDCEMTCPKNCSCF 751
+ + + L + + +
Sbjct: 68 VIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSL 127
Query: 752 HDQNWNTNVVDCSEQQISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKNMLSLYVNNS 811
+ + ++ ++L+ N + I N F G + +N+
Sbjct: 128 QKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNN 187
Query: 812 QIEVILNQTFNGLSSLQVLHLENNLITHFYGYEFDNLEKLSELYL 856
+E + N F+G S +L + I Y +NL+KL
Sbjct: 188 NLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST 232
Score = 47.6 bits (111), Expect = 4e-06
Identities = 43/231 (18%), Positives = 80/231 (34%), Gaps = 8/231 (3%)
Query: 221 LHLENNEISQIAPNAFVALSSLRILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELS 280
+ +++++I + + L L + +G FS D+ +I +N ++E+
Sbjct: 13 FLCQESKVTEIPSDLP---RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVI 69
Query: 281 RGLFHKLEQLLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNELTR--IDAKTFKDLV 338
L + +I+ F L L L +SN + K
Sbjct: 70 EADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQK 129
Query: 339 FLQRLDLRNNSIGYIEDNAFLSLYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSNNLL 398
L + N ++ + ++L++N I I FNG + NN L
Sbjct: 130 VLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNL 189
Query: 399 VNIDSKAFKNCSALKELDLSSNAIVEIPS-ALSELPFLKTLDLGENQISKI 448
+ + F S LD+S I +PS L L L+ + K+
Sbjct: 190 EELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKKL 238
Score = 46.8 bits (109), Expect = 7e-06
Identities = 25/228 (10%), Positives = 55/228 (24%), Gaps = 5/228 (2%)
Query: 664 CDCSMDWLPIINNNTSPSMER---QYPKIMDLDNVVCKMTYSRGSTHLPASEAAPSQYLC 720
C + I ++ + K+ + + ++
Sbjct: 13 FLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEAD 72
Query: 721 PYDIHCFALCHCCEFDACDCEMTCPKNCSCFHDQNWNTNVVDCSEQQISTVPPRIPMDAT 780
+ E + + + Q + +
Sbjct: 73 VFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLL 132
Query: 781 HVYLDGNTFKTIPNHVFIGRKNMLSLYVNNSQIEVILNQTFNGLSSLQVLHLENNLITHF 840
+ + N N + L++N + I+ I N FNG ++ +NN +
Sbjct: 133 DIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEEL 192
Query: 841 YGYEFDNLEKLSELYLQENRIEYIANGTFNALISLQVLQLDGNRLKSF 888
F L + RI + + L L+ LK
Sbjct: 193 PNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARST--YNLKKL 238
Score = 39.9 bits (91), Expect = 0.001
Identities = 34/224 (15%), Positives = 73/224 (32%), Gaps = 14/224 (6%)
Query: 112 SKKLDLVPGSLDGLRELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSIRDIDTLGFA 171
K+ +P L R L + ++ I F +++ + +S+N + ++
Sbjct: 17 ESKVTEIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVF 74
Query: 172 VRRASAESNSGEKIECSGGMDLRILDLSHNKLRTLGDYSGITKF----------RRLQNL 221
EK ++ N L +GI + L ++
Sbjct: 75 SNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDI 134
Query: 222 HLENNEISQIAPNAFVALSSLRILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSR 281
N + + IL ++ N + + F+ + + N+L EL
Sbjct: 135 QDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPN 194
Query: 282 GLFHKLEQLLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNE 325
+FH ++LD+S + S + L +L + N +
Sbjct: 195 DVFHGASGPVILDISRTRIHS--LPSYGLENLKKLRARSTYNLK 236
Score = 39.9 bits (91), Expect = 0.001
Identities = 28/230 (12%), Positives = 68/230 (29%), Gaps = 11/230 (4%)
Query: 408 NCSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDN 467
+CS + + + EIPS L L ++ I+ G+F L + + N
Sbjct: 7 HCS-NRVFLCQESKVTEIPSDLP--RNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQN 63
Query: 468 NIGNLS-------SGMLYELPSLEVLNLSKNKIHQIEIGTFEKNKRLAAIRLDSNFLTDI 520
++ + L+E+ + NL + + ++ +
Sbjct: 64 DVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHK 123
Query: 521 NGVFTYLAQLLWLNLSENHLVWFDYAMVPGNLKWLDI-HGNYISSLNNYYEIKDGLSIKN 579
+ + N++ + + + + L + N + +
Sbjct: 124 IHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNL 183
Query: 580 LDASHNRILEISELSIPNSVEVLFINNNLIKSVKPHTFFDKSNLARVDIY 629
D ++ L + +L I+ I S+ + + L Y
Sbjct: 184 SDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY 233
Score = 38.7 bits (88), Expect = 0.002
Identities = 33/210 (15%), Positives = 70/210 (33%), Gaps = 7/210 (3%)
Query: 316 LIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLHTIYLSENRIH 375
I L +L I F L+++++ N + + + S E +
Sbjct: 31 AIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANN 90
Query: 376 HITAHLFNGLYVLSKLTLSNNLL-----VNIDSKAFKNCSALKELDLSSNAIVEIPSALS 430
+ + + + L + ++ L D + +E S +
Sbjct: 91 LLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVG 150
Query: 431 ELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSK 490
L L +N I +I N +F Q +NN+ L + + + +L++S+
Sbjct: 151 LSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISR 210
Query: 491 NKIHQIEIGTFEKNKRLAAIRLDSNFLTDI 520
+IH + E K+L + L +
Sbjct: 211 TRIHSLPSYGLENLKKL--RARSTYNLKKL 238
Score = 38.0 bits (86), Expect = 0.005
Identities = 37/236 (15%), Positives = 67/236 (28%), Gaps = 11/236 (4%)
Query: 262 SCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHIDETTFIGLIRLIILNL 321
C + Q++ + E+ L +L L I + F G L + +
Sbjct: 7 HCSN-RVFLCQESKVTEIPSDLPRNAIEL---RFVLTKLRV--IQKGAFSGFGDLEKIEI 60
Query: 322 SNNE----LTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLHTIYLSENRIHHI 377
S N+ + L ++ N E L I + +
Sbjct: 61 SQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPD 120
Query: 378 TAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIPSALSELP-FLK 436
+ + VL + + N+ + L L+ N I EI + +
Sbjct: 121 VHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDE 180
Query: 437 TLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKNK 492
N + ++ N F L + I +L S L L L + K
Sbjct: 181 LNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK 236
Score = 38.0 bits (86), Expect = 0.005
Identities = 8/42 (19%), Positives = 14/42 (33%)
Query: 62 ITTKSFQNIYSLEELKISNCKLVELPVDVFSGLRNLKRLTIN 103
+ F L IS ++ LP L+ L+ +
Sbjct: 192 LPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY 233
Score = 37.2 bits (84), Expect = 0.008
Identities = 27/196 (13%), Positives = 64/196 (32%), Gaps = 3/196 (1%)
Query: 72 SLEELKISNCKLVELPVDVFSGLRNLKRLTINTRNLQWDKSKKLDLVPGSLDGLRELQVL 131
+ EL+ KL + FSG +L+++ I+ ++ + L +R +
Sbjct: 30 NAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKAN 89
Query: 132 NISSSNIKSISDDVFCSLANIQTLNLS---RNSIRDIDTLGFAVRRASAESNSGEKIECS 188
N+ N ++ + I + + + ++ E+
Sbjct: 90 NLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFV 149
Query: 189 GGMDLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALSSLRILNIS 248
G ++ + + + +NN + ++ + F S IL+IS
Sbjct: 150 GLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDIS 209
Query: 249 SNHLVSLPEGLFSSCR 264
+ SLP + +
Sbjct: 210 RTRIHSLPSYGLENLK 225
Score = 36.0 bits (81), Expect = 0.019
Identities = 9/54 (16%), Positives = 19/54 (35%)
Query: 108 QWDKSKKLDLVPGSLDGLRELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNS 161
D + +L G +L+IS + I S+ +L ++ +
Sbjct: 183 LSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTYNLK 236
Score = 36.0 bits (81), Expect = 0.021
Identities = 21/193 (10%), Positives = 55/193 (28%), Gaps = 3/193 (1%)
Query: 715 PSQYLCPYDIHCFALCHCCEFDACDCEMTCPKNCSCFHDQNWNTNVVDCSEQQISTVPPR 774
+ D+ + + + ++ N++ + + +P
Sbjct: 46 KGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNL 105
Query: 775 IPMDATHVYLDGNTFKTIPNHVFIGRKNMLSLYVNNSQIEVILNQTFNGLSSLQVLHLEN 834
+ ++ + + + ++ N + + N +L L
Sbjct: 106 QYLLISNTGIKHLPDVHKIHSLQKVLLDI---QDNINIHTIERNSFVGLSFESVILWLNK 162
Query: 835 NLITHFYGYEFDNLEKLSELYLQENRIEYIANGTFNALISLQVLQLDGNRLKSFRAFDLN 894
N I + F+ + N +E + N F+ +L + R+ S ++ L
Sbjct: 163 NGIQEIHNCAFNGTQLDELNLSDNNNLEELPNDVFHGASGPVILDISRTRIHSLPSYGLE 222
Query: 895 TNSMLRKVYLGNN 907
LR N
Sbjct: 223 NLKKLRARSTYNL 235
Score = 33.0 bits (73), Expect = 0.19
Identities = 23/225 (10%), Positives = 62/225 (27%), Gaps = 9/225 (4%)
Query: 318 ILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSL-----YNLHTIYLSEN 372
+ +++T I + ++ L + I+ AF + + E
Sbjct: 12 VFLCQESKVTEIPSDLPRNA---IELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEV 68
Query: 373 RIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIPSALSEL 432
+ ++L + + + + + N L + + ++ S
Sbjct: 69 IEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQ 128
Query: 433 PFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKNK 492
L + N + N + L L N I + + E+ N
Sbjct: 129 KVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNCAFNGTQLDELNLSDNNN 188
Query: 493 IHQIEIGTFEKNKRLAAIRLDSNFLTDI-NGVFTYLAQLLWLNLS 536
+ ++ F + + + + + L +L +
Sbjct: 189 LEELPNDVFHGASGPVILDISRTRIHSLPSYGLENLKKLRARSTY 233
>d1h6ta2 c.10.2.1 (A:31-240) Internalin B {Listeria monocytogenes
[TaxId: 1639]}
Length = 210
Score = 47.3 bits (111), Expect = 4e-06
Identities = 32/193 (16%), Positives = 61/193 (31%), Gaps = 23/193 (11%)
Query: 287 LEQLLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLR 346
+ + +L ++ D T L + + +N+++ + + L + +L L
Sbjct: 23 FAETIKDNLKKKSVT----DAVTQNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLN 76
Query: 347 NNSIGYIEDNAFLSLYNL---------------HTIYLSENRIHHITAHLFNGLYVLSKL 391
N + I+ A L L + H NGL L +L
Sbjct: 77 GNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQL 136
Query: 392 TLSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIENG 451
I + + + + L+ L L+ L L +N IS +
Sbjct: 137 ESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDLR-- 194
Query: 452 SFKNLQQLTDLRL 464
+ L+ L L L
Sbjct: 195 ALAGLKNLDVLEL 207
Score = 43.1 bits (100), Expect = 8e-05
Identities = 25/182 (13%), Positives = 55/182 (30%), Gaps = 8/182 (4%)
Query: 675 NNNTSPSMERQYPKIMDLDNVVCKMTYSRGSTHLPASEAAPSQYLCPYDIHCFALCHCCE 734
+ T + + I + + +G +LP DI A
Sbjct: 34 KSVTDAVTQNELNSIDQIIANNSDIKSVQGIQYLPNVTKLFLNGNKLTDIKPLANLKNLG 93
Query: 735 FDACDCEMTCPKNCSCFHDQNWNTNVVDCSEQQISTVPPRIPMDATHVYLDGNTFKTIPN 794
+ D + + + ++ I+ + +++ ++ + T T+ +
Sbjct: 94 WLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITVLS 153
Query: 795 HVFIGRKNMLSLYVNNSQIEVILNQTFNGLSSLQVLHLENNLITHFYGYEFDNLEKLSEL 854
+ L + + GL+ LQ L+L N I+ L+ L L
Sbjct: 154 RLTKLDTLSLEDNQISDIVP------LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVL 205
Query: 855 YL 856
L
Sbjct: 206 EL 207
Score = 40.8 bits (94), Expect = 5e-04
Identities = 26/200 (13%), Positives = 63/200 (31%), Gaps = 11/200 (5%)
Query: 407 KNCSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVD 466
+ + +L ++ + + +EL + + + I ++ + L +T L L
Sbjct: 21 DAFAETIKDNLKKKSVTDAVT-QNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNG 77
Query: 467 NNIGNLSSGMLYELPSLEVLNLSKNKIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTY 526
N + ++ L L + + + +
Sbjct: 78 NKL--------TDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDING 129
Query: 527 LAQLLWLNLSENHLVWFDYAMVPGNLKWLDIHGNYISSLNNYYEIKDGLSIKNLDASHNR 586
L L L V L LD + +++ + ++NL S N
Sbjct: 130 LVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNH 189
Query: 587 ILEISELSIPNSVEVLFINN 606
I ++ L+ +++VL + +
Sbjct: 190 ISDLRALAGLKNLDVLELFS 209
Score = 40.0 bits (92), Expect = 8e-04
Identities = 35/212 (16%), Positives = 72/212 (33%), Gaps = 36/212 (16%)
Query: 148 SLANIQTLNLSRNSIRDIDTLGFAVRRASAESNSGEKIECSGGMDLRILDLSHNKLRTLG 207
+ A NL + S+ D T E NS + + +++ ++++
Sbjct: 22 AFAETIKDNLKKKSVTDAVTQ--------NELNS-----------IDQIIANNSDIKSV- 61
Query: 208 DYSGITKFRRLQNLHLENNEISQIAPNAFVALSSLRILNISSN------------HLVSL 255
GI + L L N+++ I P A + L+ + +SL
Sbjct: 62 --QGIQYLPNVTKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSL 119
Query: 256 PEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHIDETTFIGLIR 315
S + + ++ + ++ + L + + + D GL +
Sbjct: 120 EHNGISDINGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVPLAGLTK 179
Query: 316 LIILNLSNNELTRIDAKTFKDLVFLQRLDLRN 347
L L LS N ++ + A L L L+L +
Sbjct: 180 LQNLYLSKNHISDLRA--LAGLKNLDVLELFS 209
Score = 39.6 bits (91), Expect = 0.001
Identities = 46/203 (22%), Positives = 76/203 (37%), Gaps = 15/203 (7%)
Query: 312 GLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLHTIYLSE 371
I NL +T DA T +L + ++ N+ I + L N+ ++L+
Sbjct: 22 AFAETIKDNLKKKSVT--DAVTQNELNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNG 77
Query: 372 NRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIPSALSE 431
N++ L L L + + + + + + L
Sbjct: 78 NKLTD-----IKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVH 132
Query: 432 LPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKN 491
LP L++L LG N+I+ + L +L L L DN I ++ L L L+ L LSKN
Sbjct: 133 LPQLESLYLGNNKIT--DITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKN 188
Query: 492 KIHQIEIGTFEKNKRLAAIRLDS 514
I + K L + L S
Sbjct: 189 HISDLR--ALAGLKNLDVLELFS 209
Score = 37.3 bits (85), Expect = 0.006
Identities = 44/195 (22%), Positives = 82/195 (42%), Gaps = 10/195 (5%)
Query: 103 NTRNLQWDKSKKLDLVPGSLDGLRELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSI 162
T K D V + + L + + ++S+IKS+ L N+ L L+ N +
Sbjct: 25 ETIKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGNKL 80
Query: 163 RDIDTLGFAVRRASAESNSGEKIECSGGMDLRILDLSHNKLRTLGDYSGITKFRRLQNLH 222
DI L + + + S DL+ L + + D +G+ +L++L+
Sbjct: 81 TDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISDINGLVHLPQLESLY 140
Query: 223 LENNEISQIAPNAFVALSSLRILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRG 282
L NN+I+ I + L+ L L++ N + + + + +Y KN + +L
Sbjct: 141 LGNNKITDITVLSR--LTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDLRA- 195
Query: 283 LFHKLEQLLVLDLSS 297
L+ L VL+L S
Sbjct: 196 -LAGLKNLDVLELFS 209
Score = 35.4 bits (80), Expect = 0.025
Identities = 39/184 (21%), Positives = 75/184 (40%), Gaps = 15/184 (8%)
Query: 66 SFQNIYSLEELKISNCKLVELPVDVFSGLRNLKRLTINTRNLQWDKSKKLDLVPGSLDGL 125
+ + S++++ +N + + L N+ +L +N L K L L
Sbjct: 41 TQNELNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLNGNKLTDIKP---------LANL 89
Query: 126 RELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSIRDIDTLGFAVRRASAESNSGEKI 185
+ L L + + +K +S +++L+L N I DI+ L + S + +
Sbjct: 90 KNLGWLFLDENKVKDLSSLKDLK--KLKSLSLEHNGISDINGLVHLPQLESLYLGNNKIT 147
Query: 186 ECSGGMDLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALSSLRIL 245
+ + L LD + + D + +LQNL+L N IS + A L +L +L
Sbjct: 148 DITVLSRLTKLDTLSLEDNQISDIVPLAGLTKLQNLYLSKNHISDL--RALAGLKNLDVL 205
Query: 246 NISS 249
+ S
Sbjct: 206 ELFS 209
Score = 33.8 bits (76), Expect = 0.080
Identities = 29/207 (14%), Positives = 71/207 (34%), Gaps = 18/207 (8%)
Query: 213 TKFRRLQNLHLENNEISQIAPNAFVALSSLRILNISSNHLVSLPEGLFSSCRDISEIYAQ 272
F +L+ ++ L+S+ + +++ + S+ ++++++
Sbjct: 21 DAFAETIKDNLKKKSVTDAVTQNE--LNSIDQIIANNSDIKSVQG--IQYLPNVTKLFLN 76
Query: 273 KNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNELTRIDAK 332
N L ++ + +L + ++ + ++ + S + +
Sbjct: 77 GNKLTDIKP----------LANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEHNGISD 126
Query: 333 TFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLHTIYLSENRIHHITAHLFNGLYVLSKLT 392
+ Q L + + L L T+ L +N+I I GL L L
Sbjct: 127 INGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLY 184
Query: 393 LSNNLLVNIDSKAFKNCSALKELDLSS 419
LS N + ++ + L L+L S
Sbjct: 185 LSKNHISDLRA--LAGLKNLDVLELFS 209
Score = 33.1 bits (74), Expect = 0.17
Identities = 28/242 (11%), Positives = 77/242 (31%), Gaps = 40/242 (16%)
Query: 593 LSIPNSVEVLFINNNLIKSVKPHTFFDKSNLARVDIYANDITKLDLTALRLKPVPQNKTL 652
+++P ++ +F ++ +++K NL + + + +T+ +L ++
Sbjct: 8 ITVPTPIKQIFSDDAFAETIK-------DNLKKKSV-TDAVTQNELNSID---------- 49
Query: 653 PEFYLGGNPFDCDCSMDWLPIINNNTSPSMERQYPKIMDLDNVVCKMTYSRGSTHLPASE 712
+ + + +LP + + L+ K+T + +L
Sbjct: 50 -QIIANNSDIKSVQGIQYLPNV-------------TKLFLNG--NKLTDIKPLANLKNLG 93
Query: 713 AAPSQYLCPYDIHCFALCHCCEFDACDCEMTCPKNCSCFHDQNWNTNVVDCSEQQISTVP 772
D+ + + E + + ++ + +
Sbjct: 94 WLFLDENKVKDLSSL--KDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDITV 151
Query: 773 PRIPMDATHVYLDGNTFKTIPNHVFIGRKNMLSLYVNNSQIEVILNQTFNGLSSLQVLHL 832
+ L+ N I G + +LY++ + I + + GL +L VL L
Sbjct: 152 LSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISDL--RALAGLKNLDVLEL 207
Query: 833 EN 834
+
Sbjct: 208 FS 209
Score = 30.0 bits (66), Expect = 1.5
Identities = 16/111 (14%), Positives = 40/111 (36%), Gaps = 6/111 (5%)
Query: 818 NQTF--NGLSSLQVLHLENNLITHFYGYEFDNLEKLSELYLQENRIEYIANGTFNALISL 875
Q F + + +L+ +T L + ++ + I+ + L ++
Sbjct: 15 KQIFSDDAFAETIKDNLKKKSVTDAVTQN--ELNSIDQIIANNSDIKSVQG--IQYLPNV 70
Query: 876 QVLQLDGNRLKSFRAFDLNTNSMLRKVYLGNNPFSCSCATLQELQTWIIDN 926
L L+GN+L + N + S L++L++ +++
Sbjct: 71 TKLFLNGNKLTDIKPLANLKNLGWLFLDENKVKDLSSLKDLKKLKSLSLEH 121
>d2ca6a1 c.10.1.2 (A:2-345) Rna1p (RanGAP1), N-terminal domain
{Fission yeast (Schizosaccharomyces pombe) [TaxId:
4896]}
Length = 344
Score = 47.6 bits (111), Expect = 7e-06
Identities = 38/324 (11%), Positives = 76/324 (23%), Gaps = 22/324 (6%)
Query: 573 DGLSIKNLDASHNRILEI-SELSIPNSVEVLFINNNLIKSVKPHTFFDKSNLARVDIYAN 631
+G S+K + + + L +SV+ + ++ N I + L+
Sbjct: 6 EGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAA------RWLSENIASKK 59
Query: 632 DITKLDLTALRLKPVPQNKTLPEFYLGGNPFDCDCSMDWLPIINNNTSPSMERQYPKIMD 691
D+ + + + V L C N + E +
Sbjct: 60 DLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSK 119
Query: 692 LDNVVCKMTYSRGSTHLPASEAAPSQYLCPYDIHCFALCHCCEFDACDCEMTCPKNCSCF 751
+ ++ G ++ A + + +
Sbjct: 120 HTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWA 179
Query: 752 HDQNWNTNVVDCSEQQISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKNMLSLYVNNS 811
+ + Q P I K + S
Sbjct: 180 KTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIAL 239
Query: 812 QIEVILNQTF---NGLSSLQVLHLENNLITHFYGYEFDNLEKLSELYLQENRIE-----Y 863
+ L + LS+ + + L L LQ N IE
Sbjct: 240 KSWPNLRELGLNDCLLSARGAAAVVDAF-------SKLENIGLQTLRLQYNEIELDAVRT 292
Query: 864 IANGTFNALISLQVLQLDGNRLKS 887
+ + L L+L+GNR
Sbjct: 293 LKTVIDEKMPDLLFLELNGNRFSE 316
Score = 47.2 bits (110), Expect = 8e-06
Identities = 37/314 (11%), Positives = 87/314 (27%), Gaps = 16/314 (5%)
Query: 190 GMDLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIA----PNAFVALSSLRIL 245
G L++ ++ +++ + + + ++ + L N I A + L I
Sbjct: 7 GKSLKLDAITTEDEKSVF--AVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIA 64
Query: 246 NISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHI 305
S + + + + R + + + L + + +
Sbjct: 65 EFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLE 124
Query: 306 DET-TFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNL 364
GL ++ K K+ L+ + N + + +
Sbjct: 125 HLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 184
Query: 365 HTIYLSENRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVE 424
H + + + + +L L L V L ++ +
Sbjct: 185 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPN 244
Query: 425 IPSALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGN-----LSSGMLYE 479
+ L + ++ S L LRL N I L + + +
Sbjct: 245 LRELGLNDCLLS----ARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEK 300
Query: 480 LPSLEVLNLSKNKI 493
+P L L L+ N+
Sbjct: 301 MPDLLFLELNGNRF 314
Score = 39.1 bits (89), Expect = 0.003
Identities = 38/313 (12%), Positives = 88/313 (28%), Gaps = 35/313 (11%)
Query: 388 LSKLTLSNNLLVNIDSKAF----KNCSALKELDLSSNAI-----VEIPSALSELPFLKTL 438
+ +L + + D K+ ++KE+ LS N I + ++ L+
Sbjct: 5 IEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIA 64
Query: 439 DLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVL------------ 486
+ + ++++ + L+ L L + + P+ +
Sbjct: 65 EFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLE 124
Query: 487 --------NLSKNKIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTYLAQLLWLNLSEN 538
+ + A + + W ++
Sbjct: 125 HLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 184
Query: 539 HLVWFDYAMVPGNLKWLDIHGNYISSLNNYYEIKDGLSIKNLDASHNRILEISELSIPNS 598
H + MV ++ I + L E+K N L +
Sbjct: 185 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPN 244
Query: 599 VEVLFINNNLIKS------VKPHTFFDKSNLARVDIYANDITKLDLTALRLKPVPQNKTL 652
+ L +N+ L+ + V + + L + + N+I + L+ + L
Sbjct: 245 LRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDL 304
Query: 653 PEFYLGGNPFDCD 665
L GN F +
Sbjct: 305 LFLELNGNRFSEE 317
Score = 38.7 bits (88), Expect = 0.004
Identities = 33/314 (10%), Positives = 80/314 (25%), Gaps = 25/314 (7%)
Query: 631 NDITKLDLTALRLKPVPQNKTLPEFYLGGNPFDCDCSMDWLPIINNNTS----------- 679
+ IT D ++ + ++ ++ E L GN + + I +
Sbjct: 13 DAITTEDEKSV-FAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFT 71
Query: 680 -------PSMERQYPKIMDLDNVVCKMTYSRGSTHLPASEAAPSQYLCPYDIHCFALCHC 732
P R + + + + S + A E + L +
Sbjct: 72 GRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNN 131
Query: 733 CEFDACDCEMTCPKNCSCFHDQNWNTNVVDCSEQQISTVPPRIPMDATHVYLDGNTFKTI 792
++ + + N + + + + + T+
Sbjct: 132 GLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTV 191
Query: 793 PNHVFIGRKNMLSLYVNNSQIEVILNQTFNGLSSLQVLHLENNLITHFYGYEFDNLEKLS 852
R + + + + + + L + L+
Sbjct: 192 KMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLN 251
Query: 853 ELYLQENRIEYIANG-TFNALISLQVLQLDGNRLKSFRAFDL-----NTNSMLRKVYLGN 906
+ L + + + I LQ L+L N ++ L L + L
Sbjct: 252 DCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNG 311
Query: 907 NPFSCSCATLQELQ 920
N FS + E++
Sbjct: 312 NRFSEEDDVVDEIR 325
Score = 38.3 bits (87), Expect = 0.005
Identities = 49/350 (14%), Positives = 104/350 (29%), Gaps = 29/350 (8%)
Query: 121 SLDGLRELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSIRDIDTLGFAVRRASAESN 180
S++G + L++ I++ + KS+ + +++ + LS N+I + AS +
Sbjct: 4 SIEG-KSLKLDAITTEDEKSVFAVLL-EDDSVKEIVLSGNTIGTEAARWLSENIASKKD- 60
Query: 181 SGEKIECSGGMDLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALS 240
L I + S + D R L L+ ++ + +
Sbjct: 61 ------------LEIAEFSDIFTGRVKD-EIPEALRLLLQALLKCPKLHTVRLSDNAFGP 107
Query: 241 SLRILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHL 300
+ + I + E L+ + K + + K +
Sbjct: 108 TAQEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAP-----PLRS 162
Query: 301 SSNHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLS 360
+ + S+ L + L E
Sbjct: 163 IICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDL 222
Query: 361 LYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSNNLLVNI-DSKAFKNCSALKELDLSS 419
N T S + + L+ LS + D+ + L+ L L
Sbjct: 223 QDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQY 282
Query: 420 NAI-----VEIPSALSE-LPFLKTLDLGENQISKIENGSFKNLQQLTDLR 463
N I + + + E +P L L+L N+ S+ E+ ++++ R
Sbjct: 283 NEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE-EDDVVDEIREVFSTR 331
Score = 38.3 bits (87), Expect = 0.005
Identities = 46/364 (12%), Positives = 110/364 (30%), Gaps = 36/364 (9%)
Query: 99 RLTINTRNLQWDKSKKLDL--VPGSLDGLRELQVLNISSSNIKSISDDVFC----SLANI 152
R +I ++L+ D D V L ++ + +S + I + + S ++
Sbjct: 2 RFSIEGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDL 61
Query: 153 QTLNLSRNSIRDIDTLGFAVRRASAESNSGEKIECSGGMDLRILDLSHNKLRTLGDYSGI 212
+ S + R ++ ++C +R+ D + +
Sbjct: 62 EIAEFSDIFTGRVKDEIPEALRLLLQAL----LKCPKLHTVRLSDNAFGPTAQEPLIDFL 117
Query: 213 TKFRRLQNLHLENNEISQIAPNAFVALSSLRILNISSNHLVSLPEGLFSSCRDISEIYAQ 272
+K L++L+L NN + A +N + + L + R + +
Sbjct: 118 SKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKE 177
Query: 273 KNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNELTRIDAK 332
+ R L + + + N + + A
Sbjct: 178 WAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 237
Query: 333 TFKDLVFLQRLDLRNNSIG------YIEDNAFLSLYNLHTIYLSENRIHHITAHLFNGLY 386
K L+ L L + + ++ + L L T+ L N I
Sbjct: 238 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEI------------ 285
Query: 387 VLSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQIS 446
+ + + + + L L+L+ N E + E+ + + G ++
Sbjct: 286 -------ELDAVRTLKTVIDEKMPDLLFLELNGNRFSEEDDVVDEIREVFST-RGRGELD 337
Query: 447 KIEN 450
++++
Sbjct: 338 ELDD 341
Score = 36.0 bits (81), Expect = 0.027
Identities = 30/311 (9%), Positives = 80/311 (25%), Gaps = 19/311 (6%)
Query: 316 LIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIED----NAFLSLYNLHTIYLSE 371
L + ++ + + + ++ + L N+IG S +L S+
Sbjct: 10 LKLDAITTEDEKSV-FAVLLEDDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSD 68
Query: 372 NRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCS----ALKELDLSSNAIVEIPS 427
+ + L +L + L L + L + + +
Sbjct: 69 IFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYL 128
Query: 428 ALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLN 487
+ L + N KN L + N + N S + L
Sbjct: 129 HNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLL 188
Query: 488 LSKNKIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTYLAQLLWLNLSENHLVWFDYAM 547
+ + ++ L + + + + +
Sbjct: 189 HTVKMVQNGIRPEGIEHLLLEGLA---YCQELKVLDLQDNTFTHLGSSALAIALKSWPNL 245
Query: 548 VPGNLKWLDIHGNYISSLNNYYEIKDGLSIKNLDASHNRILEISELSIPNSV-------E 600
L + +++ + + + + ++ L +N I + ++ +
Sbjct: 246 RELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLL 305
Query: 601 VLFINNNLIKS 611
L +N N
Sbjct: 306 FLELNGNRFSE 316
Score = 36.0 bits (81), Expect = 0.029
Identities = 30/364 (8%), Positives = 83/364 (22%), Gaps = 42/364 (11%)
Query: 503 KNKRLAAIRLDSNFLTDINGVFTYLAQLLWLNLSENHLVWFDYAMVPGNLKWLDIHGNYI 562
+ K L + + + V + + LS N + + I
Sbjct: 6 EGKSLKLDAITTEDEKSVFAVLLEDDSVKEIVLSGNTI----------GTEAARWLSENI 55
Query: 563 SSLNNYYEIKDGLSIKNLDASHNRILEISELSIPNSVEVLFINNNLIKSVKPHTFFDKSN 622
+S + ++ + S + + +L K +
Sbjct: 56 ASKKD---------LEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFG 106
Query: 623 LARVDIYANDITKLDLTALRLKPVPQNKTLPEFYLGGNPFDCDCSMDWLPIINNNTSPSM 682
+ + + ++ L YL N +
Sbjct: 107 PTAQEPLIDFL-------------SKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKK 153
Query: 683 ERQYPKIMDLDNVVCKMTYSRGSTHLPASEAAPSQYLCPYDIHCFALCHCCEFDACDCEM 742
+ P + + ++ ++ + +
Sbjct: 154 AKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAY 213
Query: 743 TCPKNCSCFHDQNWNTNVVDCSEQQISTVPPRIPMDATHVYLDGNTFKTIPNHV-FIGRK 801
D + + + P + L + + +
Sbjct: 214 CQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENI 273
Query: 802 NMLSLYVNNSQIE-----VILNQTFNGLSSLQVLHLENNLITHFYGYEFDNLEKLSELYL 856
+ +L + ++IE + + L L L N + E D ++++ E++
Sbjct: 274 GLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRFSE----EDDVVDEIREVFS 329
Query: 857 QENR 860
R
Sbjct: 330 TRGR 333
Score = 30.6 bits (67), Expect = 1.5
Identities = 33/310 (10%), Positives = 83/310 (26%), Gaps = 11/310 (3%)
Query: 72 SLEELKISNCKLVELPVDVFSGLRNLKRLTINTRNLQWDKSKKLDLVPGSLDGLRELQVL 131
SL+ I+ + V ++K + ++ + + ++ L ++ ++L++
Sbjct: 9 SLKLDAITTEDEKSVF-AVLLEDDSVKEIVLSGNTIGTEAARWL---SENIASKKDLEIA 64
Query: 132 NISSSNIKSISDDVFCSLANIQTLNLSRNSIRDIDTLGFAVRRASAESNSGEKIECSGGM 191
S + D++ +L + L + + A + E + +
Sbjct: 65 EFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLE 124
Query: 192 DLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALSSLRILNISSNH 251
L + + + + + S I + S++ +
Sbjct: 125 HLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQS 184
Query: 252 LVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHIDETTFI 311
L E L+ + ++
Sbjct: 185 HRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPN 244
Query: 312 GLIRLIILNLSNNELTRIDAKTFKDLVF--LQRLDLRNNSIG-----YIEDNAFLSLYNL 364
+ L + F L LQ L L+ N I ++ + +L
Sbjct: 245 LRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDL 304
Query: 365 HTIYLSENRI 374
+ L+ NR
Sbjct: 305 LFLELNGNRF 314
Score = 27.9 bits (60), Expect = 8.2
Identities = 46/361 (12%), Positives = 105/361 (29%), Gaps = 35/361 (9%)
Query: 241 SLRILNISSNHLVSLPEGLFSSCRDISEIYAQKNSL-----VELSRGLFHKLEQLLVLDL 295
SL++ I++ S+ L + EI N++ LS + + L + +
Sbjct: 9 SLKLDAITTEDEKSVFAVL-LEDDSVKEIVLSGNTIGTEAARWLSENI-ASKKDLEIAEF 66
Query: 296 SSNHLSSNHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIED 355
S + + L+ +L R+ F +D +
Sbjct: 67 SDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHL 126
Query: 356 NAFLSLYNLHTI--YLSENRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALK 413
+ + + N + S + N L + K + +
Sbjct: 127 YLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHR 186
Query: 414 ELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLS 473
L I E L+ L + + + L + + NL
Sbjct: 187 LLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLR 246
Query: 474 SGMLYELPSLEVLNLSKNKIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTYLAQLLWL 533
L + ++ ++ + +N L +RL N + L ++
Sbjct: 247 ELGLNDCL-----LSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAV--RTLKTVIDE 299
Query: 534 NLSENHLVWFDYAMVPGNLKWLDIHGNYISSLNNYY-EIKDGLSIKNLDASHNRILEISE 592
+ +L +L+++GN S ++ EI++ S + + E+ +
Sbjct: 300 KMP--------------DLLFLELNGNRFSEEDDVVDEIREVFSTRG----RGELDELDD 341
Query: 593 L 593
+
Sbjct: 342 M 342
>d2astb2 c.10.1.3 (B:2136-2419) Cyclin A/CDK2-associated p19, Skp2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 284
Score = 46.6 bits (109), Expect = 9e-06
Identities = 55/299 (18%), Positives = 108/299 (36%), Gaps = 28/299 (9%)
Query: 194 RILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALSSLRILNISSNHL- 252
+ LDL+ L D +G + + + + Q F + ++ +++S++ +
Sbjct: 3 QTLDLTGKNL--HPDVTGRLLSQGVIAFRCPRSFMDQPLAEHF-SPFRVQHMDLSNSVIE 59
Query: 253 VSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHIDETTFIG 312
VS G+ S C + + + L + K L+ L+LS S +T
Sbjct: 60 VSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSS 119
Query: 313 LIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLHTIYLSEN 372
RL LNLS F ++ + + S + N NL LS
Sbjct: 120 CSRLDELNLSWC---------FDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTL 170
Query: 373 RIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIV--EIPSALS 430
+ + +L N + F + L+ L LS + E L
Sbjct: 171 VRRCPNLVHLDLSD--------SVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELG 222
Query: 431 ELPFLKTLDLGENQISKIENGSFKNL-QQLTDLRLVDNNIGNLSSGMLYELPSLEVLNL 488
E+P LKTL + + +G+ + L + L L++ ++ ++ + + E+ +
Sbjct: 223 EIPTLKTLQVFGI----VPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKNQEIWGI 277
Score = 44.7 bits (104), Expect = 5e-05
Identities = 23/104 (22%), Positives = 43/104 (41%), Gaps = 5/104 (4%)
Query: 153 QTLNLSRNSIRD-----IDTLGFAVRRASAESNSGEKIECSGGMDLRILDLSHNKLRTLG 207
QTL+L+ ++ + + G R E ++ +DLS++ +
Sbjct: 3 QTLDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVST 62
Query: 208 DYSGITKFRRLQNLHLENNEISQIAPNAFVALSSLRILNISSNH 251
+ +++ +LQNL LE +S N S+L LN+S
Sbjct: 63 LHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCS 106
Score = 29.3 bits (64), Expect = 3.3
Identities = 46/265 (17%), Positives = 86/265 (32%), Gaps = 45/265 (16%)
Query: 293 LDLSSNHLSSNHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGY 352
LDL+ +L + G+I + + + A+ F +Q +DL N+ I
Sbjct: 5 LDLTGKNLHPDVTGRLLSQGVI---AFRCPRSFMDQPLAEHFS-PFRVQHMDLSNSVIEV 60
Query: 353 IEDNAFLS-LYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSN--NLLVNIDSKAFKNC 409
+ LS L + L R+ + L +L LS +C
Sbjct: 61 STLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSC 120
Query: 410 SALKELDLSSNAIVEIPSALSELPF-----------------------------LKTLDL 440
S L EL+LS + + L
Sbjct: 121 SRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHL 180
Query: 441 GENQISKIENGSFKNLQQLTDLRLVD----NNIGNLSSGMLYELPSLEVLNLSKNKIHQI 496
+ ++N F+ QL L+ + +I + L E+P+L+ L + +
Sbjct: 181 DLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQVFGI----V 236
Query: 497 EIGTFEK-NKRLAAIRLDSNFLTDI 520
GT + + L ++++ + T I
Sbjct: 237 PDGTLQLLKEALPHLQINCSHFTTI 261
Score = 28.5 bits (62), Expect = 5.0
Identities = 30/223 (13%), Positives = 69/223 (30%), Gaps = 18/223 (8%)
Query: 57 LLDSSITTKSFQNIYS----LEELKISNCKLVELPVDVFSGLRNLKRLTINT-RNLQWDK 111
L +S I + I S L+ L + +L + V+ + NL RL ++
Sbjct: 53 LSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFA 112
Query: 112 SKKLDLVPGSLDGLRELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSIRDIDTLGFA 171
+ L LD L + + +++ V ++ + +N + +
Sbjct: 113 LQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVR 172
Query: 172 VRRASAESNSGEKIECSG--------GMDLRILDLSHNKLRTLGDYSGITKFRRLQNLHL 223
+ + + L+ L LS + + L+ L +
Sbjct: 173 RCPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCYDIIPETLLELGEIPTLKTLQV 232
Query: 224 ENNEISQIAPNAFVAL-SSLRILNISSNHLVSLPEGLFSSCRD 265
+ L +L L I+ +H ++ + ++
Sbjct: 233 FGI----VPDGTLQLLKEALPHLQINCSHFTTIARPTIGNKKN 271
Score = 28.5 bits (62), Expect = 5.4
Identities = 29/203 (14%), Positives = 57/203 (28%), Gaps = 7/203 (3%)
Query: 555 LDIHGNYISSLNNYYEIKDGLSIKNLDASHNRILEISELSIPNSVEVLFINNNLIKSVKP 614
LD+ G + + G+ S ++E P V+ + ++N++I+
Sbjct: 5 LDLTGKNLHPDVTGRLLSQGVIAFRCPRSFMD-QPLAEHFSPFRVQHMDLSNSVIEVSTL 63
Query: 615 HTFFDK-SNLARVDIYANDITKLDLTALRLKPVPQNKTLPEFYLGGNPFDCDCSMDWLPI 673
H + S L + + ++ + L +N L L G + ++ L
Sbjct: 64 HGILSQCSKLQNLSLEGLRLSDPIVNTL-----AKNSNLVRLNLSGCSGFSEFALQTLLS 118
Query: 674 INNNTSPSMERQYPKIMDLDNVVCKMTYSRGSTHLPASEAAPSQYLCPYDIHCFALCHCC 733
+ + V S T L S + +
Sbjct: 119 SCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLV 178
Query: 734 EFDACDCEMTCPKNCSCFHDQNW 756
D D M F N+
Sbjct: 179 HLDLSDSVMLKNDCFQEFFQLNY 201
>d1ogqa_ c.10.2.8 (A:) Polygalacturonase inhibiting protein PGIP
{Kidney bean (Phaseolus vulgaris) [TaxId: 3885]}
Length = 313
Score = 45.9 bits (107), Expect = 2e-05
Identities = 43/265 (16%), Positives = 75/265 (28%), Gaps = 8/265 (3%)
Query: 185 IECSGGMD---LRILDLSHNKLRTLGDY-SGITKFRRLQNLHLENNE-ISQIAPNAFVAL 239
+ C + LDLS L S + L L++ + P A L
Sbjct: 41 VLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKL 100
Query: 240 SSLRILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNH 299
+ L L I+ ++ S + + + N+L L L+ + N
Sbjct: 101 TQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNR 160
Query: 300 LSSNHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFL 359
+S I ++ + +S N LT TF +L RN G
Sbjct: 161 ISG-AIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGS 219
Query: 360 SLYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLSS 419
+ + + + L L NN + + L L++S
Sbjct: 220 DKNTQKIHLAKNSLAFDLGKVGLSKNL--NGLDLRNNRIYGTLPQGLTQLKFLHSLNVSF 277
Query: 420 NAIVEIPSALSELPFLKTLDLGENQ 444
N + L N+
Sbjct: 278 NNLCGEIPQGGNLQRFDVSAYANNK 302
Score = 45.9 bits (107), Expect = 2e-05
Identities = 46/263 (17%), Positives = 84/263 (31%), Gaps = 8/263 (3%)
Query: 210 SGITKFRRLQNLHLENNEISQIA--PNAFVALSSLRILNISSNH-LVSLPEGLFSSCRDI 266
T+ R+ NL L + + P++ L L L I + LV + +
Sbjct: 44 DTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQL 103
Query: 267 SEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNEL 326
+Y ++ +++ L+ LD S N LS + + + I + N
Sbjct: 104 HYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFD-GNRIS 162
Query: 327 TRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLHTIYLSENRIHHITAHLFNGLY 386
I + + N + F + A + G
Sbjct: 163 GAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFA--NLNLAFVDLSRNMLEGDASVLFGSD 220
Query: 387 VLSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIV-EIPSALSELPFLKTLDLGENQI 445
++ + D L LDL +N I +P L++L FL +L++ N +
Sbjct: 221 KNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNL 280
Query: 446 SKIENGSFKNLQQLTDLRLVDNN 468
E NLQ+ +N
Sbjct: 281 CG-EIPQGGNLQRFDVSAYANNK 302
Score = 45.1 bits (105), Expect = 3e-05
Identities = 40/261 (15%), Positives = 78/261 (29%), Gaps = 15/261 (5%)
Query: 412 LKELDLSSNAI---VEIPSALSELPFLKTLDLGEN-QISKIENGSFKNLQQLTDLRLVDN 467
+ LDLS + IPS+L+ LP+L L +G + + L QL L +
Sbjct: 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHT 111
Query: 468 NIGNLSSGMLYELPSLEVLNLSKNKIHQIEIGTFEKNKRLAAIRLDSNFLT----DINGV 523
N+ L ++ +L L+ S N + + L I D N ++ D G
Sbjct: 112 NVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGS 171
Query: 524 FTYLAQLLWLNLSENHLVWFDYAMVPGNLKWLDIHGNYISSLNNYYEIKDGLSIKNLDAS 583
F+ L + ++ + + + +L +
Sbjct: 172 FSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKN 231
Query: 584 HNRILEISELSIPNSVEVLFINNNLIKSVKPHTFFDKSNLARVDIYANDITKLDLTALRL 643
N + NN + ++ P L +++ N++ +
Sbjct: 232 SLAFDLGKVGLSKNLNGLDLRNNRIYGTL-PQGLTQLKFLHSLNVSFNNLCG------EI 284
Query: 644 KPVPQNKTLPEFYLGGNPFDC 664
+ N C
Sbjct: 285 PQGGNLQRFDVSAYANNKCLC 305
Score = 40.1 bits (92), Expect = 0.001
Identities = 24/213 (11%), Positives = 40/213 (18%), Gaps = 9/213 (4%)
Query: 648 QNKTLPEFYLGGNPFDCDCSMDWLPIINNNTSPSMERQYPKIMDLDNVVCKMTYSRGSTH 707
+ L Y+ I T +
Sbjct: 99 KLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDG 158
Query: 708 LPASEAAPSQYLCPYDIHCFALCHCCEFDACDCEMTCPKNCSCFHDQNWNTNVVDCSEQQ 767
S A P Y + N +
Sbjct: 159 NRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDAS---- 214
Query: 768 ISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKNMLSLYVNNSQIEVILNQTFNGLSSL 827
T KN+ L + N++I L Q L L
Sbjct: 215 ----VLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFL 270
Query: 828 QVLHLENNLITHFYGYEFDNLEKLSELYLQENR 860
L++ N + + NL++ N+
Sbjct: 271 HSLNVSFNNLCGEIP-QGGNLQRFDVSAYANNK 302
Score = 39.3 bits (90), Expect = 0.002
Identities = 37/251 (14%), Positives = 76/251 (30%), Gaps = 1/251 (0%)
Query: 289 QLLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNE-LTRIDAKTFKDLVFLQRLDLRN 347
++ LDLS +L + ++ L L L + L L L L + +
Sbjct: 51 RVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITH 110
Query: 348 NSIGYIEDNAFLSLYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFK 407
++ + + L T+ S N + + L L +T N + ++
Sbjct: 111 TNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYG 170
Query: 408 NCSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDN 467
+ S L S + + + + + + T +
Sbjct: 171 SFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAK 230
Query: 468 NIGNLSSGMLYELPSLEVLNLSKNKIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTYL 527
N G + +L L+L N+I+ + K L ++ + N L L
Sbjct: 231 NSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNL 290
Query: 528 AQLLWLNLSEN 538
+ + N
Sbjct: 291 QRFDVSAYANN 301
Score = 39.0 bits (89), Expect = 0.003
Identities = 33/257 (12%), Positives = 62/257 (24%), Gaps = 9/257 (3%)
Query: 633 ITKLDLTALRLKPVPQNKTLPEFYLGGNPFDCDCSMDWLPIINNNTSPSMERQ----YPK 688
+ LDL+ L L P+ +P L P+ + + + P++ + Y
Sbjct: 52 VNNLDLSGLNL---PKPYPIPSS-LANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLY 107
Query: 689 IMDLDNVVCKMTYSRGSTHLPASEAAPSQYLCPYDIHCFALCHCCEFDACDCEMTCPKNC 748
I + + L + + + +L + ++
Sbjct: 108 ITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD 167
Query: 749 SCFHDQNWNTNVVDCSEQQISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKNMLSLYV 808
S T++ + +PP V G
Sbjct: 168 SYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIH 227
Query: 809 NNSQIEVILNQTFNGLSSLQVLHLENNLITHFYGYEFDNLEKLSELYLQENRIEYIANGT 868
+L L L NN I L+ L L + N +
Sbjct: 228 LAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIP-Q 286
Query: 869 FNALISLQVLQLDGNRL 885
L V N+
Sbjct: 287 GGNLQRFDVSAYANNKC 303
Score = 36.3 bits (82), Expect = 0.021
Identities = 54/255 (21%), Positives = 92/255 (36%), Gaps = 8/255 (3%)
Query: 242 LRILNISSNHL---VSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSN 298
+ L++S +L +P L + N+LV KL QL L ++
Sbjct: 52 VNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHT 111
Query: 299 HLSSNHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAF 358
++S D + I L+ L+ S N L+ + L L + N I +++
Sbjct: 112 NVSGAIPDFLSQI--KTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSY 169
Query: 359 LSLYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLS 418
S L T L+ + LS N+L S F + +++ L+
Sbjct: 170 GSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLA 229
Query: 419 SNAIVEIPSALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNNI-GNLSSGML 477
N++ + L LDL N+I L+ L L + NN+ G + G
Sbjct: 230 KNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGG- 288
Query: 478 YELPSLEVLNLSKNK 492
L +V + NK
Sbjct: 289 -NLQRFDVSAYANNK 302
Score = 35.9 bits (81), Expect = 0.031
Identities = 42/259 (16%), Positives = 82/259 (31%), Gaps = 15/259 (5%)
Query: 312 GLIRLIILNLSNNELTRIDA--KTFKDLVFLQRLDLRNN-SIGYIEDNAFLSLYNLHTIY 368
R+ L+LS L + + +L +L L + ++ A L LH +Y
Sbjct: 48 QTYRVNNLDLSGLNLPKPYPIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLY 107
Query: 369 LSENRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVEI--P 426
++ + + + L L S N L + + L + N I
Sbjct: 108 ITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPD 167
Query: 427 SALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVL 486
S S ++ + N+++ +F NL + G+ S + + ++
Sbjct: 168 SYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIH 227
Query: 487 NLSKNKIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTYLAQLLWLNLSENHLVWFDYA 546
+ + KN +R ++ + T L L LN+S N+L
Sbjct: 228 LAKNSLAFDLGKVGLSKNLNGLDLR-NNRIYGTLPQGLTQLKFLHSLNVSFNNLC----G 282
Query: 547 MVP-----GNLKWLDIHGN 560
+P N
Sbjct: 283 EIPQGGNLQRFDVSAYANN 301
>d1m9la_ c.10.3.1 (A:) Outer arm dynein light chain 1 {Green algae
(Chlamydomonas reinhardtii) [TaxId: 3055]}
Length = 198
Score = 44.7 bits (104), Expect = 2e-05
Identities = 16/77 (20%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 388 LSKLTLSNNLLVNIDSKAFKNCSALKELDLSSN--AIVEIPSALSELPFLKTLDLGENQI 445
++K T + + + + + ++++L I ++ + LS L K L L N I
Sbjct: 1 MAKATTIKDAIRIFEERKSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNI 60
Query: 446 SKIENGSFKNLQQLTDL 462
KI + ++ L L
Sbjct: 61 EKISS--LSGMENLRIL 75
Score = 27.3 bits (59), Expect = 9.1
Identities = 26/139 (18%), Positives = 48/139 (34%), Gaps = 2/139 (1%)
Query: 143 DDVFCSLANIQTLNLSRNSIRDIDTLGFAV--RRASAESNSGEKIECSGGMDLRILDLSH 200
D +L + L LS N+I I +L R S N +KIE + + +L
Sbjct: 41 DATLSTLKACKHLALSTNNIEKISSLSGMENLRILSLGRNLIKKIENLDAVADTLEELWI 100
Query: 201 NKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALSSLRILNISSNHLVSLPEGLF 260
+ + N + + AL L L ++ N L + +
Sbjct: 101 SYNQIASLSGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENN 160
Query: 261 SSCRDISEIYAQKNSLVEL 279
++ E+ + +L +L
Sbjct: 161 ATSEYRIEVVKRLPNLKKL 179
>d1h6ua2 c.10.2.1 (A:36-262) Internalin H {Listeria monocytogenes
[TaxId: 1639]}
Length = 227
Score = 44.6 bits (104), Expect = 3e-05
Identities = 32/213 (15%), Positives = 63/213 (29%), Gaps = 22/213 (10%)
Query: 432 LPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKN 491
L + G++ ++ + +L +T L + + + L +L L L N
Sbjct: 18 LANAIKIAAGKSNVTDT--VTQADLDGITTLSAFGTGVTTIEG--VQYLNNLIGLELKDN 73
Query: 492 KIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTYLAQLLWLNLSENHLVWFDYAMVPGN 551
+I + + + + L + +
Sbjct: 74 QITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQV 133
Query: 552 LKWLDIHGNYISSLNNYY----------------EIKDGLSIKNLDASHNRILEISELSI 595
L IS L + + + L A N+I +IS L+
Sbjct: 134 LYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISPLAS 193
Query: 596 PNSVEVLFINNNLIKSVKPHTFFDKSNLARVDI 628
++ + + NN I V P + SNL V +
Sbjct: 194 LPNLIEVHLKNNQISDVSP--LANTSNLFIVTL 224
Score = 43.5 bits (101), Expect = 6e-05
Identities = 38/216 (17%), Positives = 65/216 (30%), Gaps = 47/216 (21%)
Query: 287 LEQLLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLR 346
L + + ++++ D T L + L+ +T I+ + L L L+L+
Sbjct: 18 LANAIKIAAGKSNVT----DTVTQADLDGITTLSAFGTGVTTIEG--VQYLNNLIGLELK 71
Query: 347 NNSIGYIEDNAFLSLYNLHTIYLSENRIHHITAHLFNGLYV------------------- 387
+N I + L+ + + + A L + +
Sbjct: 72 DNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNL 131
Query: 388 -------------------LSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIPSA 428
+ LS D N S L L N I +I
Sbjct: 132 QVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP- 190
Query: 429 LSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRL 464
L+ LP L + L NQIS + N L + L
Sbjct: 191 LASLPNLIEVHLKNNQISDVS--PLANTSNLFIVTL 224
Score = 41.2 bits (95), Expect = 4e-04
Identities = 38/203 (18%), Positives = 77/203 (37%), Gaps = 12/203 (5%)
Query: 121 SLDGLRELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSIRDIDTLGFAVRRASAESN 180
+ L + L+ + + +I L N+ L L N I D+ L + E +
Sbjct: 36 TQADLDGITTLSAFGTGVTTIEG--VQYLNNLIGLELKDNQITDLAPLKNLTKITELELS 93
Query: 181 SGEKIECSGGMDLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALS 240
S L+ + + D + + LQ L+L+ N+I+ I+P A +
Sbjct: 94 GNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLT-- 151
Query: 241 SLRILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHL 300
+ +S + ++ ++ + A N + ++S L L+ + L +N +
Sbjct: 152 --NLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQI 207
Query: 301 SSNHIDETTFIGLIRLIILNLSN 323
S D + L I+ L+N
Sbjct: 208 S----DVSPLANTSNLFIVTLTN 226
Score = 40.4 bits (93), Expect = 7e-04
Identities = 38/225 (16%), Positives = 77/225 (34%), Gaps = 14/225 (6%)
Query: 123 DGLRELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSIRDIDTLGFAVRRASAESNSG 182
L + SN+ L I TL+ + I+ + + E
Sbjct: 16 PALANAIKIAAGKSNVTDTVT--QADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDN 73
Query: 183 EKIECSGGMDLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALSSL 242
+ + + +L + L + S I + ++ L L + +I+ LS+L
Sbjct: 74 QITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITD--VTPLAGLSNL 131
Query: 243 RILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSS 302
++L + N + ++ + I + S L +L L N +S
Sbjct: 132 QVLYLDLNQITNISPLAGLTNLQYLSIGNAQVS----DLTPLANLSKLTTLKADDNKIS- 186
Query: 303 NHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRN 347
D + L LI ++L NN+++ + + L + L N
Sbjct: 187 ---DISPLASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLTN 226
Score = 39.6 bits (91), Expect = 0.001
Identities = 30/217 (13%), Positives = 74/217 (34%), Gaps = 13/217 (5%)
Query: 390 KLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIE 449
K+ + + + ++A + + L + I + L L L+L +NQI+ +
Sbjct: 23 KIAAGKSNVTDTVTQA--DLDGITTLSAFGTGVTTI-EGVQYLNNLIGLELKDNQITDLA 79
Query: 450 NGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKNKIHQIEIGTFEKNKRLAA 509
+L + +G+ ++ L
Sbjct: 80 PLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTST------QITDVTPLAGLSNLQV 133
Query: 510 IRLDSNFLTDINGVFTYLAQLLWLNLSENHLVWFDYAMVPGNLKWLDIHGNYISSLNNYY 569
+ LD N +T+I+ + + A + L L N IS ++
Sbjct: 134 LYLDLNQITNISPLAGLTNLQYLSIGNAQVSDLTPLANLS-KLTTLKADDNKISDISPLA 192
Query: 570 EIKDGLSIKNLDASHNRILEISELSIPNSVEVLFINN 606
+ ++ + +N+I ++S L+ +++ ++ + N
Sbjct: 193 SLP---NLIEVHLKNNQISDVSPLANTSNLFIVTLTN 226
Score = 38.5 bits (88), Expect = 0.003
Identities = 32/223 (14%), Positives = 70/223 (31%), Gaps = 21/223 (9%)
Query: 196 LDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALSSLRILNISSNHLVSL 255
+ + + D + L ++ I L++L L + N + L
Sbjct: 24 IAAGKSNVT---DTVTQADLDGITTLSAFGTGVTTI--EGVQYLNNLIGLELKDNQITDL 78
Query: 256 PEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHIDETTFIGLIR 315
+ I+E+ N L +S + + L L + + + L
Sbjct: 79 AP--LKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPLAGLSNLQVLYL 136
Query: 316 LIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLHTIYLSENRIH 375
+ + + L + + + + +L L T+ +N+I
Sbjct: 137 DLNQITNISPLAGLTNLQYLS----------IGNAQVSDLTPLANLSKLTTLKADDNKIS 186
Query: 376 HITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLS 418
I+ L L ++ L NN + ++ N S L + L+
Sbjct: 187 DISP--LASLPNLIEVHLKNNQISDVSP--LANTSNLFIVTLT 225
Score = 36.5 bits (83), Expect = 0.013
Identities = 28/206 (13%), Positives = 58/206 (28%), Gaps = 10/206 (4%)
Query: 675 NNNTSPSMERQYPKIMDLDNVVCKMTYSRGSTHLPASEAAPSQYLCPYDIHCFALCHCCE 734
+N T + I L +T G +L + D+
Sbjct: 29 SNVTDTVTQADLDGITTLSAFGTGVTTIEGVQYLNNLIGLELKDNQITDLAPLKNLTKIT 88
Query: 735 FDACDCEMTCPKNCSCFHDQNWNTNVVDCSEQQISTVPPRIPMDATHVYLDGNTFKTIPN 794
+ ++ T + + L + +
Sbjct: 89 ELELSGNPLKNVSAIAGLQSIKTLDLTST----QITDVTPLAGLSNLQVLYLDLNQITNI 144
Query: 795 HVFIGRKNMLSLYVNNSQIEVILNQTFNGLSSLQVLHLENNLITHFYGYEFDNLEKLSEL 854
G N+ Y++ +V LS L L ++N I+ +L L E+
Sbjct: 145 SPLAGLTNLQ--YLSIGNAQVSDLTPLANLSKLTTLKADDNKISDIS--PLASLPNLIEV 200
Query: 855 YLQENRIEYIANGTFNALISLQVLQL 880
+L+ N+I ++ +L ++ L
Sbjct: 201 HLKNNQISDVSP--LANTSNLFIVTL 224
Score = 36.2 bits (82), Expect = 0.016
Identities = 31/252 (12%), Positives = 65/252 (25%), Gaps = 38/252 (15%)
Query: 593 LSIPNSVEVLFINNNLIKSVKPH----------TFFDKSNLARVDIYANDITKLDLTALR 642
++ P ++ V+F + L ++K T D + + + +T ++
Sbjct: 3 ITQPTAINVIFPDPALANAIKIAAGKSNVTDTVTQADLDGITTLSAFGTGVTTIE----- 57
Query: 643 LKPVPQNKTLPEFYLGGNPFDCDCSMDWLPIINNNTSPSMERQYPKIMDLDNVVCKMTYS 702
V L L N + L I + + + +
Sbjct: 58 --GVQYLNNLIGLELKDNQITDLAPLKNLTKITELELSGNPLKNVSAIAGLQSIKTL--- 112
Query: 703 RGSTHLPASEAAPSQYLCPYDIHCFALCHCCEFDACDCEMTCPKNCSCFHDQNWNTNVVD 762
L ++ N S +
Sbjct: 113 --------------DLTSTQITDVTPLAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSI 158
Query: 763 CSEQQISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKNMLSLYVNNSQIEVILNQTFN 822
+ Q P T + D N I N++ +++ N+QI +
Sbjct: 159 GNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSP--LA 214
Query: 823 GLSSLQVLHLEN 834
S+L ++ L N
Sbjct: 215 NTSNLFIVTLTN 226
Score = 29.2 bits (64), Expect = 2.5
Identities = 15/61 (24%), Positives = 21/61 (34%), Gaps = 2/61 (3%)
Query: 109 WDKSKKLDLVPGSLDGLRELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSIRDIDTL 168
L L +L L + I IS SL N+ ++L N I D+ L
Sbjct: 156 LSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSPL 213
Query: 169 G 169
Sbjct: 214 A 214
Score = 28.8 bits (63), Expect = 3.6
Identities = 17/68 (25%), Positives = 27/68 (39%), Gaps = 4/68 (5%)
Query: 839 HFYGYEFDNLEKLSELYLQENRIEYIANGTFNALISLQVLQLDGNRLKSFRAFDLNTNSM 898
NL KL+ L +N+I I+ +L +L + L N++ +N
Sbjct: 163 VSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQISDVSPLANTSN-- 218
Query: 899 LRKVYLGN 906
L V L N
Sbjct: 219 LFIVTLTN 226
Score = 27.7 bits (60), Expect = 8.6
Identities = 9/68 (13%), Positives = 20/68 (29%), Gaps = 4/68 (5%)
Query: 846 DNLEKLSELYLQENRIEYIANGTFNALISLQVLQLDGNRLKSFRAFDLNTNSMLRKVYLG 905
L ++ ++ + T L + L G + + N L + L
Sbjct: 16 PALANAIKIAAGKSNVTDTV--TQADLDGITTLSAFGTGVTTIEGVQYLNN--LIGLELK 71
Query: 906 NNPFSCSC 913
+N +
Sbjct: 72 DNQITDLA 79
>d2ifga3 c.10.2.7 (A:36-191) High affinity nerve growth factor
receptor, N-terminal domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 156
Score = 42.1 bits (97), Expect = 8e-05
Identities = 17/114 (14%), Positives = 39/114 (34%), Gaps = 1/114 (0%)
Query: 409 CSALKELDLSSNAIVEIPSALSELPFLKTLDL-GENQISKIENGSFKNLQQLTDLRLVDN 467
L + + ++ L L L + + + +E + L +L +L +V +
Sbjct: 7 PHGSSGLRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKS 66
Query: 468 NIGNLSSGMLYELPSLEVLNLSKNKIHQIEIGTFEKNKRLAAIRLDSNFLTDIN 521
+ ++ + P L LNLS N + + T + + +
Sbjct: 67 GLRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCA 120
Score = 42.1 bits (97), Expect = 8e-05
Identities = 32/195 (16%), Positives = 56/195 (28%), Gaps = 53/195 (27%)
Query: 744 CPKNCSCFHDQNWNTNVVDCSEQQISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKNM 803
CP C ++ + C+ +P L
Sbjct: 1 CPDACCP-----HGSSGLRCTRDGALDSLHHLPGAENLTELYIE---------------- 39
Query: 804 LSLYVNNSQIEVILNQTFNGLSSLQVLHLENNLITHFYGYEFDNLEKLSELYLQENRIEY 863
N ++ + + GL L+ L + + + F +LS L L N +E
Sbjct: 40 -----NQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLSFNALES 94
Query: 864 IANGTFNALISLQVLQLDGNRLKSFRAFDLNTNSMLRKVYLGNNPFSCSCATLQELQTWI 923
++ T L+++ L NP CSC L+ LQ W
Sbjct: 95 LSWKTVQ-------------------------GLSLQELVLSGNPLHCSC-ALRWLQRWE 128
Query: 924 IDNSNKVKDGLDISC 938
+ V + + C
Sbjct: 129 EEGLGGVPEQ-KLQC 142
Score = 38.2 bits (87), Expect = 0.002
Identities = 20/144 (13%), Positives = 48/144 (33%), Gaps = 5/144 (3%)
Query: 292 VLDLSSNHLSSNHIDETTFIGLIRLIILNLS-NNELTRIDAKTFKDLVFLQRLDLRNNSI 350
L + + + G L L + L ++ + + L L+ L + + +
Sbjct: 12 GLRCTRDGALDSL---HHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGL 68
Query: 351 GYIEDNAFLSLYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCS 410
++ +AF L + LS N + ++ GL + + N L + + +
Sbjct: 69 RFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWE 128
Query: 411 ALKELDLSSNAIV-EIPSALSELP 433
+ + L+ +P
Sbjct: 129 EEGLGGVPEQKLQCHGQGPLAHMP 152
Score = 31.7 bits (70), Expect = 0.34
Identities = 23/136 (16%), Positives = 39/136 (28%), Gaps = 5/136 (3%)
Query: 193 LRILDLSHNKLRTLGDYSGITKFRRLQNLHLE-NNEISQIAPNAFVALSSLRILNISSNH 251
L + + + L L++E + + L LR L I +
Sbjct: 10 SSGLRCTRDGALDS--LHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSG 67
Query: 252 LVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSSNHIDETTFI 311
L + F +S + N+L LS L L LS N L +
Sbjct: 68 LRFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQ-GLSLQELVLSGNPLHCSC-ALRWLQ 125
Query: 312 GLIRLIILNLSNNELT 327
+ + +L
Sbjct: 126 RWEEEGLGGVPEQKLQ 141
Score = 30.5 bits (67), Expect = 0.73
Identities = 18/126 (14%), Positives = 36/126 (28%), Gaps = 20/126 (15%)
Query: 580 LDASHNRILEISEL--SIPNSVEVLFINNNLIKSVKPHTFFDKSNLARVDIYANDITKLD 637
L + + L+ N E+ N ++ ++ L + I + + +
Sbjct: 13 LRCTRDGALDSLHHLPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVA 72
Query: 638 LTALRLKPVP--------QNKTLPEFYL----------GGNPFDCDCSMDWLPIINNNTS 679
A P ++L + GNP C C++ WL
Sbjct: 73 PDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWEEEGL 132
Query: 680 PSMERQ 685
+ Q
Sbjct: 133 GGVPEQ 138
Score = 30.5 bits (67), Expect = 0.83
Identities = 26/144 (18%), Positives = 49/144 (34%), Gaps = 3/144 (2%)
Query: 340 LQRLDLRNNSIGYIEDNAFLSLYNLHTIYLSENR-IHHITAHLFNGLYVLSKLTLSNNLL 398
L + + NL +Y+ + + H+ GL L LT+ + L
Sbjct: 10 SSGLRCTRDGALDSLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGL 68
Query: 399 VNIDSKAFKNCSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQIS-KIENGSFKNLQ 457
+ AF L L+LS NA+ + + L+ L L N + + +
Sbjct: 69 RFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLSLQELVLSGNPLHCSCALRWLQRWE 128
Query: 458 QLTDLRLVDNNIGNLSSGMLYELP 481
+ + + + G L +P
Sbjct: 129 EEGLGGVPEQKLQCHGQGPLAHMP 152
>d2omxa2 c.10.2.1 (A:37-235) Internalin B {Listeria monocytogenes
[TaxId: 1639]}
Length = 199
Score = 42.0 bits (97), Expect = 2e-04
Identities = 38/196 (19%), Positives = 70/196 (35%), Gaps = 11/196 (5%)
Query: 407 KNCSALKELDLSSNAIVEIPSALSELPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVD 466
+ + L + + S ++L + TL I I+ + L LT + +
Sbjct: 15 TALAEKMKTVLGKTNVTDTVS-QTDLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSN 71
Query: 467 NNIGNLSSGMLYELPSLEVLNLSKNKIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTY 526
N + + + L +L L +QI T N N
Sbjct: 72 NQLTD-----ITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKN 126
Query: 527 LAQLLWLNLSENHLVWFDYAMVPGNLKWLDIHGNYISSLNNYYEIKDGLSIKNLDASHNR 586
L L L LS N + +L+ L+ N ++ L + +++ LD S N+
Sbjct: 127 LTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLT---TLERLDISSNK 183
Query: 587 ILEISELSIPNSVEVL 602
+ +IS L+ ++E L
Sbjct: 184 VSDISVLAKLTNLESL 199
Score = 38.1 bits (87), Expect = 0.003
Identities = 37/183 (20%), Positives = 68/183 (37%), Gaps = 10/183 (5%)
Query: 432 LPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKN 491
L LG+ ++ S +L Q+T L+ I ++ + L +L +N S N
Sbjct: 17 LAEKMKTVLGKTNVTDTV--SQTDLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSNN 72
Query: 492 KIHQIEIGTFEKNKRLAAIRLDSNFLTDINGVFTYLAQLLWLNLSENHLVWFDYAMVPGN 551
++ I T KN L +N L L L L N + D N
Sbjct: 73 QLTDI---TPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTN 129
Query: 552 LKWLDIHGNYISSLNNYYEIKDGLSIKNLDASHNRILEISELSIPNSVEVLFINNNLIKS 611
L L++ N IS ++ + + + ++ L+ ++E L I++N +
Sbjct: 130 LNRLELSSNTISDISALSGLTSLQQLNFSSNQVTDLKPLANLT---TLERLDISSNKVSD 186
Query: 612 VKP 614
+
Sbjct: 187 ISV 189
Score = 35.4 bits (80), Expect = 0.027
Identities = 33/215 (15%), Positives = 72/215 (33%), Gaps = 19/215 (8%)
Query: 224 ENNEISQIAPNAFVALSSLRILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGL 283
++ I+QI + AL+ + ++ + ++ + A + + +
Sbjct: 4 QDTPINQIFTDT--ALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSIDG-- 57
Query: 284 FHKLEQLLVLDLSSNHLSSNHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRL 343
L L ++ S+N L+ + + ++ L NN
Sbjct: 58 VEYLNNLTQINFSNNQLTDIT-----PLKNLTKLVDILMNNNQIADITPLANLTNLTGLT 112
Query: 344 DLRNNSIGYIEDNAFLSLYNLHTIYLSENRIHHITAHLFNGLYVLSKLTLSNNLLVNIDS 403
N +L L + + I ++ S ++ D
Sbjct: 113 LFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLNFSSNQVT-------DL 165
Query: 404 KAFKNCSALKELDLSSNAIVEIPSALSELPFLKTL 438
K N + L+ LD+SSN + +I L++L L++L
Sbjct: 166 KPLANLTTLERLDISSNKVSDIS-VLAKLTNLESL 199
Score = 35.0 bits (79), Expect = 0.033
Identities = 43/187 (22%), Positives = 63/187 (33%), Gaps = 13/187 (6%)
Query: 312 GLIRLIILNLSNNELTRIDAKTFKDLVFLQRLDLRNNSIGYIEDNAFLSLYNLHTIYLSE 371
L + L +T D + DL + L I I+ +L+ NL I S
Sbjct: 16 ALAEKMKTVLGKTNVT--DTVSQTDLDQVTTLQADRLGIKSIDGVEYLN--NLTQINFSN 71
Query: 372 NRIHHITAHLFNGLYVLSKLTLSNNLLVNIDSKAFKNCSALKELDLSSNAIVEIPSALSE 431
N++ L L+KL I N + L
Sbjct: 72 NQLTD-----ITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPLKN 126
Query: 432 LPFLKTLDLGENQISKIENGSFKNLQQLTDLRLVDNNIGNLSSGMLYELPSLEVLNLSKN 491
L L L+L N IS I S Q + N + +L L L +LE L++S N
Sbjct: 127 LTNLNRLELSSNTISDISALSGLTSLQQLNFS--SNQVTDLKP--LANLTTLERLDISSN 182
Query: 492 KIHQIEI 498
K+ I +
Sbjct: 183 KVSDISV 189
Score = 34.3 bits (77), Expect = 0.055
Identities = 33/157 (21%), Positives = 53/157 (33%), Gaps = 22/157 (14%)
Query: 121 SLDGLRELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSIRDIDTLGFAVRRASAESN 180
S L ++ L IKSI L N+ +N S N + DI L + N
Sbjct: 35 SQTDLDQVTTLQADRLGIKSIDG--VEYLNNLTQINFSNNQLTDITPLKNLTKLVDILMN 92
Query: 181 SGEKIECSGGMDLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPN------ 234
+ + + + +L L + D + L L L +N IS I+
Sbjct: 93 NNQIADITPLANLTNLTGLTLFNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSL 152
Query: 235 --------------AFVALSSLRILNISSNHLVSLPE 257
L++L L+ISSN + +
Sbjct: 153 QQLNFSSNQVTDLKPLANLTTLERLDISSNKVSDISV 189
Score = 33.5 bits (75), Expect = 0.12
Identities = 18/180 (10%), Positives = 45/180 (25%), Gaps = 8/180 (4%)
Query: 675 NNNTSPSMERQYPKIMDLDNVVCKMTYSRGSTHLPASEAAPSQYLCPYDIHCFALCHCCE 734
N T + ++ L + G +L DI
Sbjct: 28 TNVTDTVSQTDLDQVTTLQADRLGIKSIDGVEYLNNLTQINFSNNQLTDITPLKNLTKLV 87
Query: 735 FDACDCEMTCPKNCSCFHDQNWNTNVVDCSEQQISTVPPRIPMDATHVYLDGNTFKTIPN 794
+ + + + L+ ++
Sbjct: 88 DILMNNNQIADITPLANLTNLTGLTLFNNQITD----IDPLKNLTNLNRLELSSNTISDI 143
Query: 795 HVFIGRKNMLSLYVNNSQIEVILNQTFNGLSSLQVLHLENNLITHFYGYEFDNLEKLSEL 854
G ++ L +++Q+ + + L++L+ L + +N ++ L L L
Sbjct: 144 SALSGLTSLQQLNFSSNQVTDL--KPLANLTTLERLDISSNKVSDI--SVLAKLTNLESL 199
Score = 30.0 bits (66), Expect = 1.6
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 2/35 (5%)
Query: 66 SFQNIYSLEELKISNCKLVELPVDVFSGLRNLKRL 100
N+ +LE L IS+ K+ ++ V + L NL+ L
Sbjct: 167 PLANLTTLERLDISSNKVSDIS--VLAKLTNLESL 199
Score = 29.6 bits (65), Expect = 2.0
Identities = 34/221 (15%), Positives = 67/221 (30%), Gaps = 36/221 (16%)
Query: 123 DGLRELQVLNISSSNIKSISDDVFCSLANIQTLNLSRNSIRDIDTLGFAVRRASAESNSG 182
L E + +N+ L + TL R I+ ID + +
Sbjct: 15 TALAEKMKTVLGKTNVTDTVS--QTDLDQVTTLQADRLGIKSIDGVEYLNN--------- 63
Query: 183 EKIECSGGMDLRILDLSHNKLRTLGDYSGITKFRRLQNLHLENNEISQIAPNAFVALSSL 242
L ++ S+N+L + +TK + + + +I+ +A + +L
Sbjct: 64 ----------LTQINFSNNQLTDITPLKNLTKLVDILMNNNQIADITPLANLTNLTGLTL 113
Query: 243 RILNISSNHLVSLPEGLFSSCRDISEIYAQKNSLVELSRGLFHKLEQLLVLDLSSNHLSS 302
I+ + L + I S + S+
Sbjct: 114 FNNQITDIDPLKNLTNLNRLELSSNTISDISALSGLTSLQQLN-------------FSSN 160
Query: 303 NHIDETTFIGLIRLIILNLSNNELTRIDAKTFKDLVFLQRL 343
D L L L++S+N+++ I L L+ L
Sbjct: 161 QVTDLKPLANLTTLERLDISSNKVSDISV--LAKLTNLESL 199
>d1cyga1 b.1.18.2 (A:492-574) Cyclomaltodextrin glycanotransferase,
domain D {Bacillus stearothermophilus [TaxId: 1422]}
Length = 83
Score = 36.5 bits (84), Expect = 0.002
Identities = 16/63 (25%), Positives = 24/63 (38%)
Query: 768 ISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKNMLSLYVNNSQIEVILNQTFNGLSSL 827
I V P + V +DG F T V G + +N+QI V + G ++
Sbjct: 6 IGHVGPMMGQVGHQVTIDGEGFGTNTGTVKFGTTAANVVSWSNNQIVVAVPNVSPGKYNI 65
Query: 828 QVL 830
V
Sbjct: 66 TVQ 68
>d3bmva1 b.1.18.2 (A:496-578) Cyclomaltodextrin glycanotransferase,
domain D {Thermoanaerobacterium [TaxId: 28895]}
Length = 83
Score = 36.0 bits (83), Expect = 0.003
Identities = 11/62 (17%), Positives = 25/62 (40%)
Query: 768 ISTVPPRIPMDATHVYLDGNTFKTIPNHVFIGRKNMLSLYVNNSQIEVILNQTFNGLSSL 827
I V P + + +DG F T V G + ++++++V + G ++
Sbjct: 6 IGHVGPTMTKAGQTITIDGRGFGTTSGQVLFGSTAGTIVSWDDTEVKVKVPSVTPGKYNI 65
Query: 828 QV 829
+
Sbjct: 66 SL 67
>d1moxa3 g.3.9.1 (A:163-311) EGF receptor Cys-rich domains {Human
(Homo sapiens) [TaxId: 9606]}
Length = 149
Score = 31.6 bits (70), Expect = 0.28
Identities = 4/52 (7%), Positives = 11/52 (21%), Gaps = 4/52 (7%)
Query: 720 CPYDIHCFALCHCCEFDACDCEMTCPKNCSC----FHDQNWNTNVVDCSEQQ 767
CP + + + + + + + V C
Sbjct: 78 CPPLMLYNPTTYQMDVNPEGKYSFGATCVKKCPRNYVVTDHGSCVRACGADS 129
Score = 31.2 bits (69), Expect = 0.35
Identities = 6/51 (11%), Positives = 10/51 (19%), Gaps = 2/51 (3%)
Query: 720 CPYDIHCFALCHCCEFDACDCE--MTCPKNCSCFHDQNWNTNVVDCSEQQI 768
C + CC C ++ T C +
Sbjct: 33 CSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLML 83
>d2fnua1 c.67.1.4 (A:2-372) Spore coat polysaccharide biosynthesis
protein C {Helicobacter pylori [TaxId: 210]}
Length = 371
Score = 32.0 bits (71), Expect = 0.54
Identities = 13/161 (8%), Positives = 36/161 (22%), Gaps = 5/161 (3%)
Query: 662 FDCDCSMDWLPIINNNTSPSMERQYPKIMDLDNVVCKMTYSRGSTHLPASEAAPSQYLCP 721
S L ++ ++ + + + + E A Y
Sbjct: 203 MKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTYDRI 262
Query: 722 YDIHCFALCHCCEFDACDCEMTCPKNCSCFHDQNWNTNVVDCSEQQISTVPPRIPMDATH 781
+ + + P + ++ I P+
Sbjct: 263 FKDNPYFTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHYKPIYQYQ 322
Query: 782 VYLDGNTFKTIPNHVFIGRKNMLSL----YVNNSQIEVILN 818
+Y + + +SL +N ++ I +
Sbjct: 323 LYQQLFNTAPLKSAEDFY-HAEISLPCHANLNLESVQNIAH 362
>d1vr6a1 c.1.10.4 (A:1-338)
3-deoxy-D-arabino-heptulosonate-7-phosphate synthase
(DAHP synthase, AroG) {Thermotoga maritima [TaxId:
2336]}
Length = 338
Score = 31.6 bits (71), Expect = 0.69
Identities = 10/114 (8%), Positives = 25/114 (21%), Gaps = 3/114 (2%)
Query: 671 LPIINNNTSPSMERQYPKIMDLDNVVCKMTYSRGSTHLPASEAAP---SQYLCPYDIHCF 727
+ ++ + + D+ + + + S P +
Sbjct: 159 MYVVTEALGEDDLPKVAEYADIIQIGARNAQNFRLLSKAGSYNKPVLLKRGFMNTIEEFL 218
Query: 728 ALCHCCEFDACDCEMTCPKNCSCFHDQNWNTNVVDCSEQQISTVPPRIPMDATH 781
+ C + F NT + I +D +H
Sbjct: 219 LSAEYIANSGNTKIILCERGIRTFEKATRNTLDISAVPIIRKESHLPILVDPSH 272
>d1jmxa2 a.3.1.7 (A:86-162) Quinohemoprotein amine dehydrogenase A
chain, domains 1 and 2 {Pseudomonas putida [TaxId: 303]}
Length = 77
Score = 28.3 bits (63), Expect = 1.3
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 669 DWLPIINNNTSPSMERQYPK 688
DWLPI P + ++YP
Sbjct: 58 DWLPIALQQVVPDLAKRYPL 77
>d1vfia1 g.84.1.1 (A:4-95) Vanadium-binding protein 2, vanabin 2
{Vanadium-rich ascidian (Ascidia sydneiensis samea)
[TaxId: 79730]}
Length = 92
Score = 28.6 bits (63), Expect = 1.3
Identities = 8/34 (23%), Positives = 10/34 (29%), Gaps = 6/34 (17%)
Query: 725 HCFALCHCCE---FDACD---CEMTCPKNCSCFH 752
+C C AC C CPK+
Sbjct: 48 PQDKVCDACRMKCHKACRAANCASECPKHEHKSD 81
>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain
3 {Pig (Sus scrofa) [TaxId: 9823]}
Length = 153
Score = 29.7 bits (66), Expect = 1.4
Identities = 10/125 (8%), Positives = 29/125 (23%), Gaps = 24/125 (19%)
Query: 667 SMDWLPIINNNTSPSMERQYPKIMDLDNVV-----------------------CKMTYSR 703
S D+LP++ ++ M + + + V + + +
Sbjct: 19 SKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRK 78
Query: 704 GSTHLPASEAAPSQYLCPYDIHCFALCHCCEFDACDCEMTCPKNCSCFHDQNWNTNVVDC 763
G ++ A + + + D+ N +
Sbjct: 79 GFVNIRAVPEEVELAKEEKCEFLPF-LSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDED 137
Query: 764 SEQQI 768
+
Sbjct: 138 QIVHL 142
>d2gdta1 d.346.1.1 (A:2-116) Nsp1 {SARS coronavirus [TaxId: 227859]}
Length = 115
Score = 28.9 bits (64), Expect = 1.6
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 276 LVELSRGLFHKLEQLLVLDLSSNHLSSNH 304
LVEL +G+ +LEQ V S+ LS+NH
Sbjct: 41 LVELEKGVLPQLEQPYVFIKRSDALSTNH 69
>d1fftb2 f.17.2.1 (B:27-117) Cytochrome O ubiquinol oxidase, subunit
II {Escherichia coli [TaxId: 562]}
Length = 91
Score = 28.2 bits (63), Expect = 1.6
Identities = 6/27 (22%), Positives = 11/27 (40%)
Query: 979 FMIITFLMFLVFLILIIFMFVFKDPFR 1005
+ LM +V + I+ F +R
Sbjct: 18 ILTAFGLMLIVVIPAILMAVGFAWKYR 44
>d1i2ma_ c.37.1.8 (A:) Ran {Human (Homo sapiens) [TaxId: 9606]}
Length = 170
Score = 29.6 bits (65), Expect = 1.7
Identities = 11/105 (10%), Positives = 25/105 (23%)
Query: 660 NPFDCDCSMDWLPIINNNTSPSMERQYPKIMDLDNVVCKMTYSRGSTHLPASEAAPSQYL 719
+ PI N + + ++ + D + + + +
Sbjct: 39 EVHPLVFHTNRGPIKFNVWDTAGQEKFGGLRDGYYIQAQCAIIMFDVTSRVTYKNVPNWH 98
Query: 720 CPYDIHCFALCHCCEFDACDCEMTCPKNCSCFHDQNWNTNVVDCS 764
C + + D + K S + N D S
Sbjct: 99 RDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDIS 143
>d1pbya2 a.3.1.7 (A:86-165) Quinohemoprotein amine dehydrogenase A
chain, domains 1 and 2 {Paracoccus denitrificans [TaxId:
266]}
Length = 80
Score = 27.9 bits (62), Expect = 1.9
Identities = 7/19 (36%), Positives = 8/19 (42%)
Query: 669 DWLPIINNNTSPSMERQYP 687
DW I P + R YP
Sbjct: 58 DWWGIAQAEIIPFLARTYP 76
>d1mvha_ b.85.7.1 (A:) SET domain of Clr4 {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 269
Score = 28.6 bits (63), Expect = 5.3
Identities = 12/63 (19%), Positives = 19/63 (30%), Gaps = 3/63 (4%)
Query: 715 PSQYLCPYDIHCFALCHCCEFDACDCEMTCPKNCSCFHDQNWNTNVVDCSEQQISTVPPR 774
+Q + P D + + C+C CD P C C D + Q
Sbjct: 53 LTQGVIPPDPNFQSGCNCSSLGGCDL--NNPSRCECLDDLD-EPTHFAYDAQGRVRADTG 109
Query: 775 IPM 777
+
Sbjct: 110 AVI 112
>d2dtge6 g.3.9.1 (E:157-311) Insulin receptor {Human (Homo sapiens)
[TaxId: 9606]}
Length = 155
Score = 27.7 bits (60), Expect = 6.5
Identities = 8/72 (11%), Positives = 16/72 (22%)
Query: 696 VCKMTYSRGSTHLPASEAAPSQYLCPYDIHCFALCHCCEFDACDCEMTCPKNCSCFHDQN 755
+C T + C HC +C + C + +
Sbjct: 2 ICPGTAKGKTNCPATVINGQFVERCWTHSHCQKVCPTICKSHGCTAEGLCCHSECLGNCS 61
Query: 756 WNTNVVDCSEQQ 767
+ C +
Sbjct: 62 QPDDPTKCVACR 73
>d2i9ua1 b.92.1.4 (A:9-66,A:377-427) Guanine deaminase {Clostridium
acetobutylicum [TaxId: 1488]}
Length = 109
Score = 26.7 bits (59), Expect = 7.0
Identities = 11/62 (17%), Positives = 23/62 (37%), Gaps = 9/62 (14%)
Query: 785 DGNTFKTIPNHVFIGRKNMLSLYVNNSQIEVILNQTFNGLSSLQVLHLENNLITHFYGYE 844
+ F + + + ++ +N L + G ++ NN+I GY+
Sbjct: 14 TSDKFTIMKDSYIVVIDGKIASVSSN------LPDKYKGN---PIIDFRNNIIIFEEGYD 64
Query: 845 FD 846
FD
Sbjct: 65 FD 66
>d1n8yc3 g.3.9.1 (C:166-322) Protooncoprotein Her2 extracellular
domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 157
Score = 27.5 bits (59), Expect = 7.0
Identities = 11/125 (8%), Positives = 19/125 (15%), Gaps = 2/125 (1%)
Query: 648 QNKTLPEFYLGGNPFDCDCSMDWLPIINNNTSPSMERQYPKIMDLDNVVCKMTYSRGSTH 707
DC + S
Sbjct: 31 GTICTSGCARCKGRLPTDCCHEQCAAGCTGPKHSDCLACLHFNHSGICELHCPALVTYNT 90
Query: 708 LPASEAAPSQYLCPYDIHCFALCHCCEF--DACDCEMTCPKNCSCFHDQNWNTNVVDCSE 765
+ + C C + C + CP N ++ CS+
Sbjct: 91 DTFESMHNPEGRYTFGASCVTTCPYNYLSTEVGSCTLVCPPNNQEVTAEDGTQRCEKCSK 150
Query: 766 QQIST 770
Sbjct: 151 PCARV 155
>d1iwga8 f.35.1.1 (A:513-566,A:869-1036) Multidrug efflux transporter
AcrB transmembrane domain {Escherichia coli [TaxId: 562]}
Length = 222
Score = 27.8 bits (61), Expect = 8.1
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 980 MIITFLMFLVFLILIIFMFVFKDPFRVWL 1008
+ + +VFL L + PF V L
Sbjct: 61 SLYAISLIVVFLCLAALYESWSIPFSVML 89
>d1i2ka_ e.17.1.1 (A:) Aminodeoxychorismate lyase {Escherichia coli
[TaxId: 562]}
Length = 269
Score = 27.7 bits (60), Expect = 8.2
Identities = 18/168 (10%), Positives = 41/168 (24%), Gaps = 4/168 (2%)
Query: 600 EVLFINNNLIKSVKPHTFFDKSNLARVDIYANDITKLDLTALRLKPVPQNKTLPEFYLGG 659
+ + + + H + R+ I + +L+ L QN L G
Sbjct: 27 TTARVIDGKVSLLSAHIQRLQDACQRLMISCDFWPQLEQEMKTLAAEQQNGVLKVVISRG 86
Query: 660 NPFDCDCSMDWLPIINNNTSPSMERQYPKIMDLDNVVCKMTYSRGSTHLPASEAAPSQYL 719
+ +++ P + + Y ++ + + G A ++
Sbjct: 87 SGGRGYSTLNSGPATRILSVTAYPAHYDRLRNEGITLALSPVRLGRNPHLAGIKHLNRLE 146
Query: 720 CPYDIHCFALCHCCEF----DACDCEMTCPKNCSCFHDQNWNTNVVDC 763
+ E C N T +D
Sbjct: 147 QVLIRSHLEQTNADEALVLDSEGWVTECCAANLFWRKGNVVYTPRLDQ 194
>d1s2xa_ a.47.3.1 (A:) Cag-Z {Helicobacter pylori [TaxId: 210]}
Length = 180
Score = 27.4 bits (60), Expect = 8.8
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 952 DLNSTTCTEYYATSSVIASIMVSDYLPFMIITFLMFLVFLILII 995
+ N+ TC E S ++AS + +YLP I +M + F IL I
Sbjct: 112 NFNNFTCDEVARISDLVASYLPREYLPPFIDGNMMGVAFQILGI 155
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.134 0.396
Gapped
Lambda K H
0.267 0.0659 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 4,904,805
Number of extensions: 233143
Number of successful extensions: 1637
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1008
Number of HSP's successfully gapped: 289
Length of query: 1344
Length of database: 2,407,596
Length adjustment: 96
Effective length of query: 1248
Effective length of database: 1,089,516
Effective search space: 1359715968
Effective search space used: 1359715968
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (26.7 bits)