Query psy16378
Match_columns 578
No_of_seqs 427 out of 2961
Neff 9.5
Searched_HMMs 29240
Date Fri Aug 16 19:47:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16378.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16378hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 1E-47 3.4E-52 413.1 11.3 211 94-332 25-244 (510)
2 2rh1_A Beta-2-adrenergic recep 100.0 8.3E-43 2.8E-47 374.2 16.5 202 97-329 36-242 (500)
3 3uon_A Human M2 muscarinic ace 100.0 3.4E-43 1.2E-47 373.7 11.1 208 97-333 19-226 (467)
4 3odu_A C-X-C chemokine recepto 100.0 8.1E-43 2.8E-47 374.4 4.2 205 96-333 43-249 (502)
5 3rze_A Histamine H1 receptor, 100.0 6.3E-42 2.1E-46 362.4 10.6 201 130-331 9-209 (452)
6 3vw7_A Proteinase-activated re 100.0 1E-41 3.5E-46 364.1 9.9 205 98-332 17-227 (484)
7 4dkl_A MU-type opioid receptor 100.0 5E-42 1.7E-46 364.3 7.0 204 97-332 13-220 (464)
8 3v2y_A Sphingosine 1-phosphate 100.0 2.7E-41 9.1E-46 364.1 12.0 192 98-325 60-251 (520)
9 3eml_A Human adenosine A2A rec 100.0 1.1E-40 3.7E-45 356.3 12.0 203 99-331 19-230 (488)
10 3pbl_A D(3) dopamine receptor, 100.0 2.5E-41 8.4E-46 360.9 6.3 193 100-329 37-233 (481)
11 2ks9_A Substance-P receptor; w 100.0 3E-39 1E-43 331.9 17.4 193 98-323 29-226 (364)
12 4eiy_A Adenosine receptor A2A/ 100.0 2.7E-40 9.4E-45 349.2 9.5 204 96-329 26-238 (447)
13 1u19_A Rhodopsin; G protein-co 100.0 1.5E-39 5.1E-44 331.9 14.5 198 96-324 33-235 (349)
14 4amj_A Beta-1 adrenergic recep 100.0 1.8E-39 6.3E-44 326.0 12.9 193 132-326 14-210 (315)
15 2z73_A Rhodopsin; visual pigme 100.0 1.2E-38 4.1E-43 337.1 17.4 203 97-329 30-236 (448)
16 2lnl_A C-X-C chemokine recepto 100.0 1.4E-39 4.9E-44 324.7 9.4 191 98-319 8-200 (296)
17 4ea3_A Fusion protein of nocic 100.0 1.8E-38 6.1E-43 334.4 14.3 195 97-323 121-319 (434)
18 3sn6_R Lysozyme, beta-2 adrene 100.0 1E-38 3.4E-43 343.7 12.3 201 98-329 179-384 (514)
19 2koe_A Human cannabinoid recep 98.9 5.8E-10 2E-14 73.7 1.8 36 543-578 2-37 (40)
20 1hll_A Alpha-2A adrenergic rec 98.4 1.1E-07 3.6E-12 59.2 1.6 31 215-245 2-32 (32)
21 2lot_A Apelin receptor; membra 95.0 0.00094 3.2E-08 47.7 -3.3 22 103-124 30-51 (64)
22 3vw7_A Proteinase-activated re 90.3 0.17 5.8E-06 52.5 3.9 24 244-267 386-409 (484)
23 2ki9_A Cannabinoid receptor 2; 89.6 0.016 5.3E-07 35.5 -2.8 10 525-534 15-24 (33)
24 3rze_A Histamine H1 receptor, 82.8 0.68 2.3E-05 47.2 3.4 33 99-131 6-38 (452)
25 2ket_A Cathelicidin-6; antimic 63.2 2.9 0.0001 22.5 1.1 12 567-578 4-15 (27)
26 2rdd_B UPF0092 membrane protei 60.4 12 0.00041 23.1 3.8 26 304-329 7-33 (37)
27 4amj_A Beta-1 adrenergic recep 40.3 4.4 0.00015 38.4 -0.9 62 516-578 226-300 (315)
28 3eml_A Human adenosine A2A rec 38.0 1.1E+02 0.0039 30.5 9.5 71 508-578 381-466 (488)
29 3odu_A C-X-C chemokine recepto 34.2 1.4 4.8E-05 45.6 -6.1 40 539-578 453-492 (502)
30 3arc_M Photosystem II reaction 31.1 74 0.0025 19.4 3.7 22 295-316 8-29 (36)
31 2rh1_A Beta-2-adrenergic recep 25.9 11 0.00038 38.8 -0.8 41 537-578 436-476 (500)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=1e-47 Score=413.11 Aligned_cols=211 Identities=20% Similarity=0.294 Sum_probs=176.4
Q ss_pred CCCcchHHHHHHHHHHHHHHhhhcCceEEEEEeeccchhHHHHHHHHHHHHHhhhheeeeEEecCCc---cchhHHHHHH
Q psy16378 94 PRFTTTQVIIIATFAAFLSIVTVLGNILVMVSFKIDKTLQTISNYFLIVTVLGNILVMVSFKIDKTL---QTISNYFLFS 170 (578)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~g~~gN~~vi~~~~~~~~l~~i~~~i~~~gi~gN~lvi~~i~~~~~l---r~~~~~~i~~ 170 (578)
...+....+++.++|++++++|++||++|++ ++.++|++ ++++|+||+|
T Consensus 25 ~~~~~~~~v~~~~~~~~i~~~g~~gN~lvi~----------------------------~i~~~~~~r~~~~~~n~~i~~ 76 (510)
T 4grv_A 25 VNTDIYSKVLVTAIYLALFVVGTVGNSVTLF----------------------------TLARKKSLQSLQSTVHYHLGS 76 (510)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------HTSCC----CCHHHHHHHHHH
T ss_pred cChhHHHHHHHHHHHHHHHHHHHHHHHHhhh----------------------------heeeecCCCCCCChHHHHHHH
Confidence 3445677888889999999999999988888 88776654 5889999999
Q ss_pred HHHHHHHhhhhchhHHHHHHHc--CccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCccccchhhhH
Q psy16378 171 LAVADFAIGAISMPLFTVYTIL--GYWPLGPMVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTKRAAC 248 (578)
Q Consensus 171 LAvaDll~~~~~~p~~~~~~~~--~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~ 248 (578)
||+||++++++.+|+.++..+. +.|.+|+.+|++..++..++..+|++++++||+|||+||++|++|+..++++++..
T Consensus 77 La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~ 156 (510)
T 4grv_A 77 LALSDLLILLLAMPVELYNFIWVHHPWAFGDAGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKK 156 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccce
Confidence 9999999999999999887654 46999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhHHhhccccccc---ccccceeeeeccccc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16378 249 MIVTAWGVSMILWPPWIFAWPYIEGE---RRVPYYECYIQFIET-NHYITFLTAIAAFYIPVSVMIFLYLRIYKETEKRK 324 (578)
Q Consensus 249 ~i~~~W~~s~~~~~p~~~~~~~~~~~---~~~~~~~C~~~~~~~-~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~l~~~~ 324 (578)
+++++|++++++++|+++.++..... .......|...++.. ...|.++.+++.|++|+++|+++|.+|++.++++.
T Consensus 157 ~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~f~iP~~ii~~~Y~~I~~~l~~~~ 236 (510)
T 4grv_A 157 FISAIWLASALLAIPMLFTMGLQNRSADGTHPGGLVCTPIVDTATVKVVIQVNTFMSFLFPMLVISILNTVIANKLTVMV 236 (510)
T ss_dssp HHHHHHHHHHHHHTTHHHHEEEEECSSSSCCGGGEEEEECSCHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTSC
T ss_pred eehHHHHHHHHHHHHHHHhhcccccccCCCCCCccccccccccchhhhhhhhhhhHHHhhhHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999987654332 223345677666443 33566667778899999999999999999999887
Q ss_pred hhhhhhhh
Q psy16378 325 KEFSNLQA 332 (578)
Q Consensus 325 ~~~~~~~~ 332 (578)
+.....+.
T Consensus 237 ~~~~~~~~ 244 (510)
T 4grv_A 237 NIFEMLRI 244 (510)
T ss_dssp THHHHHHH
T ss_pred hhhhhhcc
Confidence 76554443
No 2
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=100.00 E-value=8.3e-43 Score=374.19 Aligned_cols=202 Identities=29% Similarity=0.564 Sum_probs=168.0
Q ss_pred cchHHHHHHHHHHHHHHhhhcCceEEEEEeeccchhHHHHHHHHHHHHHhhhheeeeEEecCCccchhHHHHHHHHHHHH
Q psy16378 97 TTTQVIIIATFAAFLSIVTVLGNILVMVSFKIDKTLQTISNYFLIVTVLGNILVMVSFKIDKTLQTISNYFLFSLAVADF 176 (578)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~~gN~~vi~~~~~~~~l~~i~~~i~~~gi~gN~lvi~~i~~~~~lr~~~~~~i~~LAvaDl 176 (578)
.....++++++|.+++++|++||+++++ ++.+++++|+++|+|++|||++|+
T Consensus 36 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~----------------------------~i~~~~~l~~~~~~~l~nLAiaDl 87 (500)
T 2rh1_A 36 DEVWVVGMGIVMSLIVLAIVFGNVLVIT----------------------------AIAKFERLQTVTNYFITSLACADL 87 (500)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------HHHHCGGGCSHHHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------HHhhcCccCcccHHHHHHHHHHHH
Confidence 3455667778888888888888888887 888899999999999999999999
Q ss_pred HhhhhchhHHHHHHHcCccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCccccchhhhHHHHHHHHH
Q psy16378 177 AIGAISMPLFTVYTILGYWPLGPMVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTKRAACMIVTAWGV 256 (578)
Q Consensus 177 l~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~ 256 (578)
+++++.+|+.+...+.+.|.+|...|++..++..++..+|++++++||+|||+||++|++|+.+++++++..+++++|++
T Consensus 88 l~~~~~~p~~~~~~~~~~w~~~~~~C~~~~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~ 167 (500)
T 2rh1_A 88 VMGLAVVPFGAAHILMKMWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIV 167 (500)
T ss_dssp HHHHHTHHHHHHHHHHTSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHH
Confidence 99999999999998889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHH-hhcccccccccccceeeeeccc----cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy16378 257 SMILWPPWI-FAWPYIEGERRVPYYECYIQFI----ETNHYITFLTAIAAFYIPVSVMIFLYLRIYKETEKRKKEFSN 329 (578)
Q Consensus 257 s~~~~~p~~-~~~~~~~~~~~~~~~~C~~~~~----~~~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~l~~~~~~~~~ 329 (578)
+++++++++ +.+..... .....|...+. .....|.++..++.|++|+++|++||++|++.+|++.++++.
T Consensus 168 s~~~~~~p~~~~~~~~~~---~~~~~c~~~~~~~~~~~~~~y~~~~~~~~~~iPl~ii~~~Y~~I~~~l~~~~~~~~~ 242 (500)
T 2rh1_A 168 SGLTSFLPIQMHWYRATH---QEAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLNIFEM 242 (500)
T ss_dssp HHHHHHHHHHTTTTCCCS---HHHHHHHHCTTCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHCSHHHH
T ss_pred HHHHHhcchheeeecccc---cCcceecccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999986444 44332211 11223433221 123456677778889999999999999999999998776443
No 3
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=100.00 E-value=3.4e-43 Score=373.71 Aligned_cols=208 Identities=59% Similarity=0.995 Sum_probs=181.7
Q ss_pred cchHHHHHHHHHHHHHHhhhcCceEEEEEeeccchhHHHHHHHHHHHHHhhhheeeeEEecCCccchhHHHHHHHHHHHH
Q psy16378 97 TTTQVIIIATFAAFLSIVTVLGNILVMVSFKIDKTLQTISNYFLIVTVLGNILVMVSFKIDKTLQTISNYFLFSLAVADF 176 (578)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~~gN~~vi~~~~~~~~l~~i~~~i~~~gi~gN~lvi~~i~~~~~lr~~~~~~i~~LAvaDl 176 (578)
.....++..+++.+++++|++||+++++ ++.+++++|+++|+|++|||++|+
T Consensus 19 ~~~~~~~~~~~~~~~~~~g~~gN~lvi~----------------------------~~~~~~~~~~~~~~~l~~La~aDl 70 (467)
T 3uon_A 19 KTFEVVFIVLVAGSLSLVTIIGNILVMV----------------------------SIKVNRHLQTVNNYFLFSLACADL 70 (467)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHHHHH----------------------------HHHHCGGGCSHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhee----------------------------eeeecCccCchhHHHHHHHHHHHH
Confidence 3455677788888888888888888888 888899999999999999999999
Q ss_pred HhhhhchhHHHHHHHcCccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCccccchhhhHHHHHHHHH
Q psy16378 177 AIGAISMPLFTVYTILGYWPLGPMVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTKRAACMIVTAWGV 256 (578)
Q Consensus 177 l~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~ 256 (578)
+.+++.+|+.+.....+.|.++...|++..++..++..+|++++++||+|||++|++|++|+..++++++..+++++|++
T Consensus 71 l~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~ 150 (467)
T 3uon_A 71 IIGVFSMNLYTLYTVIGYWPLGPVVCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVL 150 (467)
T ss_dssp HHHHTHHHHHHHHHHSSSCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCccCCcchHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHhhcccccccccccceeeeeccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc
Q psy16378 257 SMILWPPWIFAWPYIEGERRVPYYECYIQFIETNHYITFLTAIAAFYIPVSVMIFLYLRIYKETEKRKKEFSNLQAA 333 (578)
Q Consensus 257 s~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~l~~~~~~~~~~~~~ 333 (578)
++++++|+++.+.............|...+.. ...|.++..++.|++|+++++++|++|++.++++.++.......
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~-~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~ 226 (467)
T 3uon_A 151 SFILWAPAILFWQFIVGVRTVEDGECYIQFFS-NAAVTFGTAIAAFYLPVIIMTVLYWHISRASKSRINIFEMLRID 226 (467)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCCSSCCCCGGGG-SHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhhhcccccCCCCCcceeecCc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHhhhc
Confidence 99999999988766544444445578877653 34566777788999999999999999999999988776655433
No 4
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=100.00 E-value=8.1e-43 Score=374.39 Aligned_cols=205 Identities=19% Similarity=0.320 Sum_probs=176.4
Q ss_pred CcchHHHHHHHHHHHHHHhhhcCceEEEEEeeccchhHHHHHHHHHHHHHhhhheeeeEEecCCccchhHHHHHHHHHHH
Q psy16378 96 FTTTQVIIIATFAAFLSIVTVLGNILVMVSFKIDKTLQTISNYFLIVTVLGNILVMVSFKIDKTLQTISNYFLFSLAVAD 175 (578)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~g~~gN~~vi~~~~~~~~l~~i~~~i~~~gi~gN~lvi~~i~~~~~lr~~~~~~i~~LAvaD 175 (578)
......+++.+++.+++++|++||+++++ ++.+++++|+++|+|++|||++|
T Consensus 43 ~~~~~~~~~~~~~~~i~~~g~~gN~lvi~----------------------------~~~~~~~l~~~~~~~l~~La~~D 94 (502)
T 3odu_A 43 NANFNKIFLPTIYSIIFLTGIVGNGLVIL----------------------------VMGYQKKLRSMTDKYRLHLSVAD 94 (502)
T ss_dssp CCTTHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------HTTTTCCSCCHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------HHHhcccCCCHHHHHHHHHHHHH
Confidence 44567888888999999999999988888 88899999999999999999999
Q ss_pred HHhhhhchhHHHHHHHcCccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCccccchhhhHHHHHHHH
Q psy16378 176 FAIGAISMPLFTVYTILGYWPLGPMVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTKRAACMIVTAWG 255 (578)
Q Consensus 176 ll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~W~ 255 (578)
+++ ++.+|+.+..... .|.++...|++..++..++..+|++++++||+|||++|++|++|+..++++++..+++++|+
T Consensus 95 ll~-~~~~p~~~~~~~~-~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~ 172 (502)
T 3odu_A 95 LLF-VITLPFWAVDAVA-NWYFGNFLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWI 172 (502)
T ss_dssp HHH-HTTHHHHHHHHHT-CCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHH
T ss_pred HHH-HHHHHHHHHHHhc-CCcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHH
Confidence 999 5789988877665 69999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHhhcccccccccccceeeeeccccch--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhc
Q psy16378 256 VSMILWPPWIFAWPYIEGERRVPYYECYIQFIETN--HYITFLTAIAAFYIPVSVMIFLYLRIYKETEKRKKEFSNLQAA 333 (578)
Q Consensus 256 ~s~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~~--~~~~~~~~~~~~~lPl~ii~~~y~~I~~~l~~~~~~~~~~~~~ 333 (578)
+++++++|+++.+..... .....|...+.... ..|.+...++.+++|++++++||++|++.++++.++.......
T Consensus 173 ~~~~~~~~~~~~~~~~~~---~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~~~ 249 (502)
T 3odu_A 173 PALLLTIPDFIFANVSEA---DDRYICDRFYPNDLWVVVFQFQHIMVGLILPGIVILSCYCIIISKLSHSGSNIFEMLRI 249 (502)
T ss_dssp HHHHTTHHHHHHEEEEEC---SSSEEEEECCSSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHGGGCSCCHHHHHHH
T ss_pred HHHHHHHHHHHheeeecc---CCceEEeecCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhhhhhh
Confidence 999999999887655433 23457876665432 3455666778899999999999999999999988876665444
No 5
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=100.00 E-value=6.3e-42 Score=362.37 Aligned_cols=201 Identities=32% Similarity=0.605 Sum_probs=169.0
Q ss_pred chhHHHHHHHHHHHHHhhhheeeeEEecCCccchhHHHHHHHHHHHHHhhhhchhHHHHHHHcCccccccccchhhhHHH
Q psy16378 130 KTLQTISNYFLIVTVLGNILVMVSFKIDKTLQTISNYFLFSLAVADFAIGAISMPLFTVYTILGYWPLGPMVCDTWLALD 209 (578)
Q Consensus 130 ~~l~~i~~~i~~~gi~gN~lvi~~i~~~~~lr~~~~~~i~~LAvaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 209 (578)
..+.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.+++.+|+.+.....+.|.++...|++..++.
T Consensus 9 ~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 88 (452)
T 3rze_A 9 MPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLSMD 88 (452)
T ss_dssp CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHHHH
Confidence 45566777788888888888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCCCcCccccchhhhHHHHHHHHHHHHhhhhHHhhcccccccccccceeeeeccccc
Q psy16378 210 YLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTKRAACMIVTAWGVSMILWPPWIFAWPYIEGERRVPYYECYIQFIET 289 (578)
Q Consensus 210 ~~~~~~S~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~ 289 (578)
.++..+|++++++||+|||++|++|++|+..++++++..+++++|++++++++|.+....+...........|..++..
T Consensus 89 ~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~- 167 (452)
T 3rze_A 89 YVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWNHFMQQTSVRREDKCETDFYD- 167 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHCCCC-------CCSSSSCCSCTT-
T ss_pred HHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCCeecCCCcc-
Confidence 9999999999999999999999999999999999999999999999999998885544333322222344578766543
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q psy16378 290 NHYITFLTAIAAFYIPVSVMIFLYLRIYKETEKRKKEFSNLQ 331 (578)
Q Consensus 290 ~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~l~~~~~~~~~~~ 331 (578)
...|.++..++.|++|+++++++|++|++.++++.++.....
T Consensus 168 ~~~~~~~~~~~~~~~p~~ii~~~y~~I~~~l~~~~~~~~~~~ 209 (452)
T 3rze_A 168 VTWFKVMTAIINFYLPTLLMLWFYAKIYKAVRQHCNIFEMLR 209 (452)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSCCCCCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHhh
Confidence 345666777888999999999999999999998877655443
No 6
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=100.00 E-value=1e-41 Score=364.09 Aligned_cols=205 Identities=20% Similarity=0.315 Sum_probs=164.9
Q ss_pred chHHHHHHHHHHHHHHhhhcCceEEEEEeeccchhHHHHHHHHHHHHHhhhheeeeEEecCCccchhHHHHHHHHHHHHH
Q psy16378 98 TTQVIIIATFAAFLSIVTVLGNILVMVSFKIDKTLQTISNYFLIVTVLGNILVMVSFKIDKTLQTISNYFLFSLAVADFA 177 (578)
Q Consensus 98 ~~~~~~~~~~~~~~~~~g~~gN~~vi~~~~~~~~l~~i~~~i~~~gi~gN~lvi~~i~~~~~lr~~~~~~i~~LAvaDll 177 (578)
....+++.+++.+++++|++||+++++ ++.+++++|+++|+|++|||++|++
T Consensus 17 ~~~~~~~~~~~~~i~~~~i~gN~lvi~----------------------------~~~~~~~l~~~~~~~l~~La~aDll 68 (484)
T 3vw7_A 17 SWLTLFVPSVYTGVFVVSLPLNIMAIV----------------------------VFILKMKVKKPAVVYMLHLATADVL 68 (484)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHH----------------------------HHHHHGGGCCHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------HHHhccccCCHHHHHHHHHHHHHHH
Confidence 455666777777777777777777777 8999999999999999999999999
Q ss_pred hhhhchhHHHHHHHc-CccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCccccchhhhHHHHHHHHH
Q psy16378 178 IGAISMPLFTVYTIL-GYWPLGPMVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTKRAACMIVTAWGV 256 (578)
Q Consensus 178 ~~~~~~p~~~~~~~~-~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~ 256 (578)
+++ .+|+.+...+. +.|.++...|++..++..++..+|++++++||+|||+||++|++|+..++++++..+++++|++
T Consensus 69 ~~~-~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~ 147 (484)
T 3vw7_A 69 FVS-VLPFKISYYFSGSDWQFGSELCRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWAL 147 (484)
T ss_dssp HHT-THHHHHHHHHTTSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHH
T ss_pred HHH-HHHHHHHHHHhcCCcccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHH
Confidence 954 56666665555 4899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHhhcccccccccccceeeeeccccch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q psy16378 257 SMILWPPWIFAWPYIEGERRVPYYECYIQFIETN-----HYITFLTAIAAFYIPVSVMIFLYLRIYKETEKRKKEFSNLQ 331 (578)
Q Consensus 257 s~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~~-----~~~~~~~~~~~~~lPl~ii~~~y~~I~~~l~~~~~~~~~~~ 331 (578)
++++++|+++.+...... ......|...+.... ..|.++..++.|++|+++|++||++|++.++++.++.....
T Consensus 148 s~~~~~p~~~~~~~~~~~-~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~Y~~I~~~l~~~~~~~~~~~ 226 (484)
T 3vw7_A 148 AIAGVVPLLLKEQTIQVP-GLGITTCHDVLSETLLEGYYAYYFSAFSAVFFFVPLIISTVCYVSIIRCLSSSANIFEMLR 226 (484)
T ss_dssp HHHHHHHHHTSCCEEEET-TTTEEEESSSCSSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHHHHHH
T ss_pred HHHHHHHHHHhhhccccC-CCCCceeeccCCccchhHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhHhhHHHHhhh
Confidence 999999999887654332 223457876654321 22555666788999999999999999999999887665544
Q ss_pred h
Q psy16378 332 A 332 (578)
Q Consensus 332 ~ 332 (578)
.
T Consensus 227 ~ 227 (484)
T 3vw7_A 227 I 227 (484)
T ss_dssp H
T ss_pred h
Confidence 3
No 7
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=100.00 E-value=5e-42 Score=364.29 Aligned_cols=204 Identities=25% Similarity=0.437 Sum_probs=173.7
Q ss_pred cchHHHHHHHHHHHHHHhhhcCceEEEEEeeccchhHHHHHHHHHHHHHhhhheeeeEEecCCccchhHHHHHHHHHHHH
Q psy16378 97 TTTQVIIIATFAAFLSIVTVLGNILVMVSFKIDKTLQTISNYFLIVTVLGNILVMVSFKIDKTLQTISNYFLFSLAVADF 176 (578)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~~gN~~vi~~~~~~~~l~~i~~~i~~~gi~gN~lvi~~i~~~~~lr~~~~~~i~~LAvaDl 176 (578)
+....+++.+++.+++++|++||+++++ ++.+++++|+++|+|++|||++|+
T Consensus 13 ~~~~~~~~~~~~~~~~~~gi~gN~lvi~----------------------------~~~~~~~~~~~~~~~l~~La~~Dl 64 (464)
T 4dkl_A 13 SMVTAITIMALYSIVCVVGLFGNFLVMY----------------------------VIVRYTKMKTATNIYIFNLALADA 64 (464)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------HHHHCSTTCSHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHeeh----------------------------hhhhccccCCHHHHHHHHHHHHHH
Confidence 3456777788888888888888888888 888999999999999999999999
Q ss_pred HhhhhchhHHHHHHHcCccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCccccchhhhHHHHHHHHH
Q psy16378 177 AIGAISMPLFTVYTILGYWPLGPMVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTKRAACMIVTAWGV 256 (578)
Q Consensus 177 l~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~ 256 (578)
+.++. +|+.+...+.+.|.++...|++..++..++..+|++++++||+|||++|++|++|+.+++++++..+++++|++
T Consensus 65 l~~~~-~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~ 143 (464)
T 4dkl_A 65 LATST-LPFQSVNYLMGTWPFGNILCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWIL 143 (464)
T ss_dssp HHHHH-HHHHHHHHHHSSCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHhCCcccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHH
Confidence 99766 99999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHhhcccccccccccceeeeeccccch----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhh
Q psy16378 257 SMILWPPWIFAWPYIEGERRVPYYECYIQFIETN----HYITFLTAIAAFYIPVSVMIFLYLRIYKETEKRKKEFSNLQA 332 (578)
Q Consensus 257 s~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~~----~~~~~~~~~~~~~lPl~ii~~~y~~I~~~l~~~~~~~~~~~~ 332 (578)
++++++|+++....... .....|...+.... ..|.++.+++.+++|+++++++|++|++.+++++++.+....
T Consensus 144 ~~~~~~p~~~~~~~~~~---~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ii~~~y~~i~~~l~~~~~~~~~~~~ 220 (464)
T 4dkl_A 144 SSAIGLPVMFMATTKYR---QGSIDCTLTFSHPTWYWENLLKICVFIFAFIMPVLIITVCYGLMILRLKSVRNIFEMLRI 220 (464)
T ss_dssp HHHHHHHHHHSBCCEEE---TTEEECCBCCSSSHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHCCCCCSHHHHHHH
T ss_pred HHHHHHHHHHheeeccc---CCCceEEeecCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhhcc
Confidence 99999998876544322 23346776655432 245566677789999999999999999999988876655543
No 8
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=100.00 E-value=2.7e-41 Score=364.07 Aligned_cols=192 Identities=20% Similarity=0.310 Sum_probs=160.1
Q ss_pred chHHHHHHHHHHHHHHhhhcCceEEEEEeeccchhHHHHHHHHHHHHHhhhheeeeEEecCCccchhHHHHHHHHHHHHH
Q psy16378 98 TTQVIIIATFAAFLSIVTVLGNILVMVSFKIDKTLQTISNYFLIVTVLGNILVMVSFKIDKTLQTISNYFLFSLAVADFA 177 (578)
Q Consensus 98 ~~~~~~~~~~~~~~~~~g~~gN~~vi~~~~~~~~l~~i~~~i~~~gi~gN~lvi~~i~~~~~lr~~~~~~i~~LAvaDll 177 (578)
.....+..++|.+++++|++||++|++ ++.+++++|+++|+|++|||++|++
T Consensus 60 ~~~~~~~~~~~~~i~~~g~~gN~lvi~----------------------------vi~~~~~lr~~~~~~l~nLA~aDll 111 (520)
T 3v2y_A 60 ENSIKLTSVVFILICCFIILENIFVLL----------------------------TIWKTKKFHRPMYYFIGNLALSDLL 111 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------HHHHCSTTCSHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHH----------------------------HHHhCccccChHHHHHHHHHHHHHH
Confidence 344477788888888888888888888 8999999999999999999999999
Q ss_pred hhhhchhHHHHHHHcCccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCccccchhhhHHHHHHHHHH
Q psy16378 178 IGAISMPLFTVYTILGYWPLGPMVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTKRAACMIVTAWGVS 257 (578)
Q Consensus 178 ~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s 257 (578)
++++.+|..+.. ....|.++...|++..++..++.++|++++++||+|||+||+ |++|+..++++++..+++++|+++
T Consensus 112 ~~~~~~p~~~~~-~~~~~~~~~~~c~~~~~~~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s 189 (520)
T 3v2y_A 112 AGVAYTANLLLS-GATTYKLTPAQWFLREGSMFVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVIS 189 (520)
T ss_dssp HHHHHHHHHHHS-GGGGTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHc-cccceeeCccccchHHHHHHHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHH
Confidence 998888877765 556789999999999999999999999999999999999999 999999999999999999999999
Q ss_pred HHhhhhHHhhcccccccccccceeeeeccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy16378 258 MILWPPWIFAWPYIEGERRVPYYECYIQFIETNHYITFLTAIAAFYIPVSVMIFLYLRIYKETEKRKK 325 (578)
Q Consensus 258 ~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~l~~~~~ 325 (578)
+++++|+++++..+. +...|...++.....|.++. ++.|++|+++|++||.+|++.+|++..
T Consensus 190 ~~~~~~~~~~~~~~~-----~~~~C~~~~~~~~~~~~~~~-~~~~~lPl~ii~~~Y~~I~~~l~~~~~ 251 (520)
T 3v2y_A 190 LILGGLPIMGWNCIS-----ALSSCSTVLPLYHKHYILFC-TTVFTLLLLSIVILYCRIYSLVRTRNI 251 (520)
T ss_dssp HHHHHTTTTTCBCTT-----CGGGBCSSSTTBBHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHeecccc-----CCCcccccCCccchHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 999999998877652 23478877765555555444 457999999999999999999999863
No 9
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=100.00 E-value=1.1e-40 Score=356.34 Aligned_cols=203 Identities=24% Similarity=0.432 Sum_probs=166.7
Q ss_pred hHHHHHHHHHHHHHHhhhcCceEEEEEeeccchhHHHHHHHHHHHHHhhhheeeeEEecCCccchhHHHHHHHHHHHHHh
Q psy16378 99 TQVIIIATFAAFLSIVTVLGNILVMVSFKIDKTLQTISNYFLIVTVLGNILVMVSFKIDKTLQTISNYFLFSLAVADFAI 178 (578)
Q Consensus 99 ~~~~~~~~~~~~~~~~g~~gN~~vi~~~~~~~~l~~i~~~i~~~gi~gN~lvi~~i~~~~~lr~~~~~~i~~LAvaDll~ 178 (578)
....+..+++.+++++|++||+++++ ++.+++++|+++|+|++|||++|+++
T Consensus 19 ~~~~~~~~~~~~i~~~gi~gN~lvi~----------------------------~~~~~~~~~~~~~~~l~~La~aDll~ 70 (488)
T 3eml_A 19 MGSSVYITVELAIAVLAILGNVLVCW----------------------------AVWLNSNLQNVTNYFVVSLAAADIAV 70 (488)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHH----------------------------HHHHCGGGCSSHHHHHHHHHHHHHHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHhhh----------------------------heeeccccCChHHHHHHHHHHHHHHH
Confidence 34456667777888888888887777 88899999999999999999999999
Q ss_pred hhhchhHHHHHHHcCccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCccccchhhhHHHHHHHHHHH
Q psy16378 179 GAISMPLFTVYTILGYWPLGPMVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTKRAACMIVTAWGVSM 258 (578)
Q Consensus 179 ~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~ 258 (578)
+++.+|+.+.... .|.++...|++..++..++..+|++++++||+|||++|++|++|+..++++++..+++++|++++
T Consensus 71 ~~~~~p~~~~~~~--~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~ 148 (488)
T 3eml_A 71 GVLAIPFAITIST--GFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSF 148 (488)
T ss_dssp HHTHHHHHHHHTT--CCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhc--cccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHH
Confidence 9999998876543 58889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhHHhhcccccccc--cccceeeeecc-------ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy16378 259 ILWPPWIFAWPYIEGER--RVPYYECYIQF-------IETNHYITFLTAIAAFYIPVSVMIFLYLRIYKETEKRKKEFSN 329 (578)
Q Consensus 259 ~~~~p~~~~~~~~~~~~--~~~~~~C~~~~-------~~~~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~l~~~~~~~~~ 329 (578)
++++|+++++..+.... ......|...+ .....++.++.+++.+++|+++++++|++|++.++++.++...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~ii~~~y~~I~~~l~~~~~~~~~ 228 (488)
T 3eml_A 149 AIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLNIFEM 228 (488)
T ss_dssp HHHTTGGGTCCSSCC-------CCSSCTTCEECCHHHHSCHHHHHTTTHHHHTHHHHHHHHHHHHHHHHHHTCCCCHHHH
T ss_pred HHHHHHHhccccccccccccccccccccccceeeccccccchhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHh
Confidence 99999999877544321 11223454432 2223345555677889999999999999999999998877655
Q ss_pred hh
Q psy16378 330 LQ 331 (578)
Q Consensus 330 ~~ 331 (578)
..
T Consensus 229 ~~ 230 (488)
T 3eml_A 229 LR 230 (488)
T ss_dssp HH
T ss_pred hc
Confidence 43
No 10
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=100.00 E-value=2.5e-41 Score=360.85 Aligned_cols=193 Identities=29% Similarity=0.526 Sum_probs=161.7
Q ss_pred HHHHHHHHHHHHHHhhhcCceEEEEEeeccchhHHHHHHHHHHHHHhhhheeeeEEecCCccchhHHHHHHHHHHHHHhh
Q psy16378 100 QVIIIATFAAFLSIVTVLGNILVMVSFKIDKTLQTISNYFLIVTVLGNILVMVSFKIDKTLQTISNYFLFSLAVADFAIG 179 (578)
Q Consensus 100 ~~~~~~~~~~~~~~~g~~gN~~vi~~~~~~~~l~~i~~~i~~~gi~gN~lvi~~i~~~~~lr~~~~~~i~~LAvaDll~~ 179 (578)
...+.++++.+++++|++||+++++ ++.+++++|+++|+|++|||++|++++
T Consensus 37 ~~~~~~~~~~~~~~~g~~gN~lvi~----------------------------~~~~~~~~~~~~~~~l~~La~aDll~~ 88 (481)
T 3pbl_A 37 PHAYYALSYCALILAIVFGNGLVCM----------------------------AVLKERALQTTTNYLVVSLAVADLLVA 88 (481)
T ss_dssp ----CCSHHHHHHHHHHHHHHHHHH----------------------------HHHHCSTTCSHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhH----------------------------HhhhccccCCchHHHHHHHHHHHHHHH
Confidence 3445556667777777777777666 899999999999999999999999999
Q ss_pred hhchhHHHHHHHc-CccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCc---CccccchhhhHHHHHHHH
Q psy16378 180 AISMPLFTVYTIL-GYWPLGPMVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTY---RAKRTTKRAACMIVTAWG 255 (578)
Q Consensus 180 ~~~~p~~~~~~~~-~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~iaidRy~aI~~P~~~---~~~~t~~~~~~~i~~~W~ 255 (578)
++.+|+.+...+. +.|.++...|++..++..++..+|++++++||+|||++|++|++| ....+.+++..+++++|+
T Consensus 89 ~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~ 168 (481)
T 3pbl_A 89 TLVMPWVVYLEVTGGVWNFSRICCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWV 168 (481)
T ss_dssp HHTHHHHHHHHHTTSCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccccCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHH
Confidence 9999998887776 679999999999999999999999999999999999999999998 677888999999999999
Q ss_pred HHHHhhhhHHhhcccccccccccceeeeeccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy16378 256 VSMILWPPWIFAWPYIEGERRVPYYECYIQFIETNHYITFLTAIAAFYIPVSVMIFLYLRIYKETEKRKKEFSN 329 (578)
Q Consensus 256 ~s~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~l~~~~~~~~~ 329 (578)
+++++++|+++++.... ....|...+ ..|.++..++.+++|+++++++|++|++.++++.++...
T Consensus 169 ~~~~~~~~~~~~~~~~~-----~~~~C~~~~----~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~~ 233 (481)
T 3pbl_A 169 LAFAVSCPLLFGFNTTG-----DPTVCSISN----PDFVIYSSVVSFYLPFGVTVLVYARIYVVLKQRRRKNIF 233 (481)
T ss_dssp HHHHHHHHHHTTTCCCS-----STTCCSCCC----HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHCCCCCCHH
T ss_pred HHHHHHHHHHheecccC-----CCCcccccC----ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 99999999988766532 223676543 335666677889999999999999999999988765433
No 11
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=100.00 E-value=3e-39 Score=331.94 Aligned_cols=193 Identities=21% Similarity=0.375 Sum_probs=161.9
Q ss_pred chHHHHHHHHHHHHHHhhhcCceEEEEEeeccchhHHHHHHHHHHHHHhhhheeeeEEecCCccchhHHHHHHHHHHHHH
Q psy16378 98 TTQVIIIATFAAFLSIVTVLGNILVMVSFKIDKTLQTISNYFLIVTVLGNILVMVSFKIDKTLQTISNYFLFSLAVADFA 177 (578)
Q Consensus 98 ~~~~~~~~~~~~~~~~~g~~gN~~vi~~~~~~~~l~~i~~~i~~~gi~gN~lvi~~i~~~~~lr~~~~~~i~~LAvaDll 177 (578)
.....+.++++.+++++|++||+++++ ++.+++++|+++|+|++|||++|++
T Consensus 29 ~~~~~~~~~~~~~i~~~gi~gN~lvi~----------------------------vi~~~~~l~~~~~~~l~~LaiaDll 80 (364)
T 2ks9_A 29 AWQIVLWAAAYTVIVVTSVVGNVVVMW----------------------------IILAHKRMRTVTNYFLVNLAFAEAS 80 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------HHHHCTTCCCHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------HHHhcccccchHHHHHHHHHHHHHH
Confidence 345556678888888888888888887 8889999999999999999999999
Q ss_pred hhhhchhHHHHHHHcCccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCccccchhhhHHHHHHHHHH
Q psy16378 178 IGAISMPLFTVYTILGYWPLGPMVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTKRAACMIVTAWGVS 257 (578)
Q Consensus 178 ~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s 257 (578)
.+++.+|+.+.....+.|.+++..|++..++..++..+|++++++||+|||++|++|++|+ .+++++..+++++|+++
T Consensus 81 ~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~--~~~~~~~~~i~~~W~~s 158 (364)
T 2ks9_A 81 MAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLA 158 (364)
T ss_dssp HHHTHHHHHHHHHHHTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTS--CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCccchHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cccchHHHHHHHHHHHH
Confidence 9999999998888888999999999999999999999999999999999999999999875 58889999999999999
Q ss_pred HHhhhhHHhhcccccccccccceeeeeccccc-----hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16378 258 MILWPPWIFAWPYIEGERRVPYYECYIQFIET-----NHYITFLTAIAAFYIPVSVMIFLYLRIYKETEKR 323 (578)
Q Consensus 258 ~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~-----~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~l~~~ 323 (578)
+++++|.++..... .......|...+... ...|.+...++.+++|+++++++|.+|++.++++
T Consensus 159 ~~~~~p~~~~~~~~---~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~ 226 (364)
T 2ks9_A 159 LLLAFPQGYYSTTE---TMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWAS 226 (364)
T ss_dssp HHHHTTTTTTSCCC---BCTTCSSBCCCCSCCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSC
T ss_pred HHHHhHHHHHhhhe---ecCCCCEEeecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99998876543222 122334687665432 2356666777889999999999999999887643
No 12
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=100.00 E-value=2.7e-40 Score=349.24 Aligned_cols=204 Identities=23% Similarity=0.412 Sum_probs=165.9
Q ss_pred CcchHHHHHHHHHHHHHHhhhcCceEEEEEeeccchhHHHHHHHHHHHHHhhhheeeeEEecCCccchhHHHHHHHHHHH
Q psy16378 96 FTTTQVIIIATFAAFLSIVTVLGNILVMVSFKIDKTLQTISNYFLIVTVLGNILVMVSFKIDKTLQTISNYFLFSLAVAD 175 (578)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~g~~gN~~vi~~~~~~~~l~~i~~~i~~~gi~gN~lvi~~i~~~~~lr~~~~~~i~~LAvaD 175 (578)
.......+..+++.+++++|++||+++++ ++.+++++|+++|+|++|||++|
T Consensus 26 ~~~~~~~~~~~i~~~i~~~gi~gN~~vl~----------------------------~~~~~~~l~~~~~~~l~~La~~D 77 (447)
T 4eiy_A 26 PPIMGSSVYITVELAIAVLAILGNVLVCW----------------------------AVWLNSNLQNVTNYFVVSLAAAD 77 (447)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------HHHHCGGGCSHHHHHHHHHHHHH
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHH----------------------------HHHHccccCcHHHHHHHHHHHHH
Confidence 34556667777888888888888888887 88889999999999999999999
Q ss_pred HHhhhhchhHHHHHHHcCccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCccccchhhhHHHHHHHH
Q psy16378 176 FAIGAISMPLFTVYTILGYWPLGPMVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTKRAACMIVTAWG 255 (578)
Q Consensus 176 ll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~W~ 255 (578)
++.+++.+|+.+... ..|..+...|++..++..++..+|++++++||+|||++|++|++|+.+++++++..+++++|+
T Consensus 78 ll~~~~~~p~~~~~~--~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi 155 (447)
T 4eiy_A 78 IAVGVLAIPFAITIS--TGFCAACHGCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWV 155 (447)
T ss_dssp HHHHHTHHHHHHHHH--TTCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh--cccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHH
Confidence 999999999887643 357778999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHhhccccccccc--ccceeeeec-------cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy16378 256 VSMILWPPWIFAWPYIEGERR--VPYYECYIQ-------FIETNHYITFLTAIAAFYIPVSVMIFLYLRIYKETEKRKKE 326 (578)
Q Consensus 256 ~s~~~~~p~~~~~~~~~~~~~--~~~~~C~~~-------~~~~~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~l~~~~~~ 326 (578)
+++++++|+++++..+..... .....|... ......++.++.+++.+++|+++++++|++|++.+|++.++
T Consensus 156 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~ 235 (447)
T 4eiy_A 156 LSFAIGLTPMLGWNNCGQPKEGKNHSQGCGEGQVACLFEDVVPMNYMVYFNFFACVLVPLLLMLGVYLRIFLAARRQLAD 235 (447)
T ss_dssp HHHHHHTGGGGTCSSTTSCCHHHHHHTTCCTTEEECCHHHHSCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhheeccccccCccccccccccccchhhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999988765433211 111233332 22222344444455678999999999999999999998877
Q ss_pred hhh
Q psy16378 327 FSN 329 (578)
Q Consensus 327 ~~~ 329 (578)
...
T Consensus 236 ~~~ 238 (447)
T 4eiy_A 236 LED 238 (447)
T ss_dssp HHH
T ss_pred hhh
Confidence 654
No 13
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=100.00 E-value=1.5e-39 Score=331.91 Aligned_cols=198 Identities=21% Similarity=0.326 Sum_probs=168.3
Q ss_pred CcchHHHHHHHHHHHHHHhhhcCceEEEEEeeccchhHHHHHHHHHHHHHhhhheeeeEEecCCccchhHHHHHHHHHHH
Q psy16378 96 FTTTQVIIIATFAAFLSIVTVLGNILVMVSFKIDKTLQTISNYFLIVTVLGNILVMVSFKIDKTLQTISNYFLFSLAVAD 175 (578)
Q Consensus 96 ~~~~~~~~~~~~~~~~~~~g~~gN~~vi~~~~~~~~l~~i~~~i~~~gi~gN~lvi~~i~~~~~lr~~~~~~i~~LAvaD 175 (578)
.+.....+.++++.+++++|++||+++++ ++.+++++|++.|++++|||++|
T Consensus 33 ~~~~~~~~~~~~~~~i~~~gi~gN~lvi~----------------------------~i~~~~~~~~~~~~ll~~Lai~D 84 (349)
T 1u19_A 33 AEPWQFSMLAAYMFLLIMLGFPINFLTLY----------------------------VTVQHKKLRTPLNYILLNLAVAD 84 (349)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------HHHHSTTCCSHHHHHHHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHhHHheEe----------------------------ehhhhhhhcCchhHHHHHHHHHH
Confidence 34566777888888888888888888888 88899999999999999999999
Q ss_pred HHhhhhchhHHHHHHHcCccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCccccchhhhHHHHHHHH
Q psy16378 176 FAIGAISMPLFTVYTILGYWPLGPMVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTKRAACMIVTAWG 255 (578)
Q Consensus 176 ll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~W~ 255 (578)
++.+++.+|..+.....+.|.++...|++..++..++..+|++++++||+|||++|++|++|++ .+++++..+++++|+
T Consensus 85 ll~~~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~~~~~~~~~i~~~W~ 163 (349)
T 1u19_A 85 LFMVFGGFTTTLYTSLHGYFVFGPTGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWV 163 (349)
T ss_dssp HHHHHHTHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHH
T ss_pred HHHHHhcchHHHHHHhcCeeeCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccee-eccchhHHHHHHHHH
Confidence 9999999999998888889999999999999999999999999999999999999999999876 789999999999999
Q ss_pred HHHHhhhhHHhhcccccccccccceeeeecccc-----chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16378 256 VSMILWPPWIFAWPYIEGERRVPYYECYIQFIE-----TNHYITFLTAIAAFYIPVSVMIFLYLRIYKETEKRK 324 (578)
Q Consensus 256 ~s~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~-----~~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~l~~~~ 324 (578)
+++++++|+++++..+... .....|...+.. ....|.+...++.+++|+++++++|.+|++.+|++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~--~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~ 235 (349)
T 1u19_A 164 MALACAAPPLVGWSRYIPE--GMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAA 235 (349)
T ss_dssp HHHHHHSGGGTTSSCCEEE--TTTTEEECCCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCC
T ss_pred HHHHHHHHHHHheeeeecc--CCceeecccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999998876543221 223467765532 234566666777889999999999999998876543
No 14
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=100.00 E-value=1.8e-39 Score=326.02 Aligned_cols=193 Identities=31% Similarity=0.595 Sum_probs=156.4
Q ss_pred hHHHHHHHHHHHHHhhhheeeeEEecCCccchhHHHHHHHHHHHHHhhhhchhHHHHHHHcCccccccccchhhhHHHHH
Q psy16378 132 LQTISNYFLIVTVLGNILVMVSFKIDKTLQTISNYFLFSLAVADFAIGAISMPLFTVYTILGYWPLGPMVCDTWLALDYL 211 (578)
Q Consensus 132 l~~i~~~i~~~gi~gN~lvi~~i~~~~~lr~~~~~~i~~LAvaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~ 211 (578)
+.+++.+++++|++||+++++++.+++++|+++|++++|||++|++.+++.+|+.+.....+.|.+|+..|++..++..+
T Consensus 14 ~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~ 93 (315)
T 4amj_A 14 MSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVL 93 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHHHHHHHH
Confidence 33444455555555555555599999999999999999999999999999999999999899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcCccccchhhhHHHHHHHHHHHHhhhhHHhhcccccccccccceeeeeccc----
Q psy16378 212 ASNASVLNLLIISFDRYFSVTRPLTYRAKRTTKRAACMIVTAWGVSMILWPPWIFAWPYIEGERRVPYYECYIQFI---- 287 (578)
Q Consensus 212 ~~~~S~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~---- 287 (578)
+..+|++++++||+|||++|++|++|+...+++++..+++++|++++++++|+++........ .....|..++.
T Consensus 94 ~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~--~~~~~c~~~~~~~~~ 171 (315)
T 4amj_A 94 CVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDED--PQALKCYQDPGCCDF 171 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCS--HHHHHHHHCTTCCCC
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccC--CCccccccccccchh
Confidence 999999999999999999999999999889999999999999999999998887764332221 12223433322
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy16378 288 ETNHYITFLTAIAAFYIPVSVMIFLYLRIYKETEKRKKE 326 (578)
Q Consensus 288 ~~~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~l~~~~~~ 326 (578)
.....|.+...++.+++|+++++++|.+|++.++++.++
T Consensus 172 ~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~ 210 (315)
T 4amj_A 172 VTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRK 210 (315)
T ss_dssp CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC---
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 234456666777788999999999999999999887654
No 15
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=100.00 E-value=1.2e-38 Score=337.13 Aligned_cols=203 Identities=26% Similarity=0.439 Sum_probs=171.7
Q ss_pred cchHHHHHHHHHHHHHHhhhcCceEEEEEeeccchhHHHHHHHHHHHHHhhhheeeeEEecCCccchhHHHHHHHHHHHH
Q psy16378 97 TTTQVIIIATFAAFLSIVTVLGNILVMVSFKIDKTLQTISNYFLIVTVLGNILVMVSFKIDKTLQTISNYFLFSLAVADF 176 (578)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~~gN~~vi~~~~~~~~l~~i~~~i~~~gi~gN~lvi~~i~~~~~lr~~~~~~i~~LAvaDl 176 (578)
.....+++++++.+++++|++||+++++ ++.+++++|++.|++++|||++|+
T Consensus 30 ~~~~~~~~~i~~~ii~i~gi~gN~lvi~----------------------------vi~~~~~~~~~~~~ll~~LaiaDl 81 (448)
T 2z73_A 30 PDAVYYSLGIFIGICGIIGCGGNGIVIY----------------------------LFTKTKSLQTPANMFIINLAFSDF 81 (448)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------HHHHCSTTCSTTHHHHHHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHhhHHHhhh----------------------------hhhhccccCCccchHHHHHHHHHH
Confidence 3445667777788888888888887777 888899999999999999999999
Q ss_pred Hhhhh-chhHHHHHHHcCccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCccccchhhhHHHHHHHH
Q psy16378 177 AIGAI-SMPLFTVYTILGYWPLGPMVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTKRAACMIVTAWG 255 (578)
Q Consensus 177 l~~~~-~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~W~ 255 (578)
+.+++ .+|+.+.....+.|.++...|++..++..++..+|++++++||+|||++|++|++|+.+++++++..+++++|+
T Consensus 82 l~~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~ 161 (448)
T 2z73_A 82 TFSLVNGFPLMTISCFLKKWIFGFAACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWL 161 (448)
T ss_dssp HHHHHHSTTHHHHHHHTTSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHhcCCccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHH
Confidence 99877 48988888888899999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhHHhhcccccccccccceeeeeccccc---hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy16378 256 VSMILWPPWIFAWPYIEGERRVPYYECYIQFIET---NHYITFLTAIAAFYIPVSVMIFLYLRIYKETEKRKKEFSN 329 (578)
Q Consensus 256 ~s~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~---~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~l~~~~~~~~~ 329 (578)
+++++++++++.+...... .....|...+... ...+.++..++.+++|+++++++|.+|++.++++.++.+.
T Consensus 162 ~s~~~~~~~~~~~~~~~~~--~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~ 236 (448)
T 2z73_A 162 WSVLWAIGPIFGWGAYTLE--GVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAA 236 (448)
T ss_dssp HHHHHHSGGGGTSSCEEEC--TTSSSEEECCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHH
T ss_pred HHHHHHHHHHhceeeeeec--CCceeEecccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988877654332 2234677665432 2345556666778999999999999999999998876543
No 16
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=324.67 Aligned_cols=191 Identities=20% Similarity=0.381 Sum_probs=150.9
Q ss_pred chHHHHHHHHHHHHHHhhhcCceEEEEEeeccchhHHHHHHHHHHHHHhhhheeeeEEecCCccchhHHHHHHHHHHHHH
Q psy16378 98 TTQVIIIATFAAFLSIVTVLGNILVMVSFKIDKTLQTISNYFLIVTVLGNILVMVSFKIDKTLQTISNYFLFSLAVADFA 177 (578)
Q Consensus 98 ~~~~~~~~~~~~~~~~~g~~gN~~vi~~~~~~~~l~~i~~~i~~~gi~gN~lvi~~i~~~~~lr~~~~~~i~~LAvaDll 177 (578)
.....+..++|++++++|++||+++++ ++.++|++|+++|+|++|||++|++
T Consensus 8 ~~~~~i~~i~y~ii~i~gv~gN~lvi~----------------------------vi~~~~~lrt~~n~~i~nLAvaDll 59 (296)
T 2lnl_A 8 TLNKYVVIIAYALVFLLSLLGNSLVML----------------------------VILYSRVGRSVTDVYLLNLALADLL 59 (296)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------HHHHCTTCCSTTHHHHHHHHHHHHH
T ss_pred chhHHhHHHHHHHHHHHHHHHHHHHHH----------------------------HHHHccCCCChHHHHHHHHHHHHHH
Confidence 345666677788888888888888877 9999999999999999999999999
Q ss_pred hhhhchhHHHHHHHcCccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCccccchhhhHHHHHHHHHH
Q psy16378 178 IGAISMPLFTVYTILGYWPLGPMVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTKRAACMIVTAWGVS 257 (578)
Q Consensus 178 ~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s 257 (578)
++ +.+|+.+.... .+|.+|+..|++..++..++..+|++++++||+|||++|++|++|+... ++++..+++++|+++
T Consensus 60 ~~-l~~p~~~~~~~-~~~~~~~~~c~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~-~~~~~~~~~~~W~~s 136 (296)
T 2lnl_A 60 FA-LTLPIWAASKV-NGWIFGTFLCKVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQK-RHLVKFVCLGCWGLS 136 (296)
T ss_dssp HH-HHHHHHHHHHH-SSSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCH-HHHHHHHHHHHHHHH
T ss_pred HH-HhhhHHHhhcc-CCCccchhHHHHHhhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchhh-hhhhHheehHHHHHH
Confidence 85 46777776655 4599999999999999999999999999999999999999999987654 466777888999999
Q ss_pred HHhhhhHHhhcccccccccccceeeeecc--ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16378 258 MILWPPWIFAWPYIEGERRVPYYECYIQF--IETNHYITFLTAIAAFYIPVSVMIFLYLRIYKE 319 (578)
Q Consensus 258 ~~~~~p~~~~~~~~~~~~~~~~~~C~~~~--~~~~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~ 319 (578)
+++++|+.+.+.............+.... ......+.+....+.+++|+.++.++|.++.+.
T Consensus 137 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~ 200 (296)
T 2lnl_A 137 MNLSLPFFLFRQAYHPNNSSPVCYEVLGNDTAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRT 200 (296)
T ss_dssp HHHHHHHHHTSSCCCCCTTSCCCCSCCSCCTTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTT
T ss_pred HHHhcchhhcceeecCCCCCceeeeeccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998887655433322211111111 122335666667788999999999999887644
No 17
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=100.00 E-value=1.8e-38 Score=334.39 Aligned_cols=195 Identities=23% Similarity=0.417 Sum_probs=157.3
Q ss_pred cchHHHHHHHHHHHHHHhhhcCceEEEEEeeccchhHHHHHHHHHHHHHhhhheeeeEEecCCccchhHHHHHHHHHHHH
Q psy16378 97 TTTQVIIIATFAAFLSIVTVLGNILVMVSFKIDKTLQTISNYFLIVTVLGNILVMVSFKIDKTLQTISNYFLFSLAVADF 176 (578)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~g~~gN~~vi~~~~~~~~l~~i~~~i~~~gi~gN~lvi~~i~~~~~lr~~~~~~i~~LAvaDl 176 (578)
.....+++.+++.+++++|++||+++++ ++.+++++|+++|+|++|||++|+
T Consensus 121 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~----------------------------~i~~~~~l~~~~~~ll~~LAvsDl 172 (434)
T 4ea3_A 121 PLGLKVTIVGLYLAVCVGGLLGNCLVMY----------------------------VILRHTKMKTATNIYIFNLALADT 172 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------HHHTTCSCCCHHHHHHHHHHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHeee----------------------------eeeecCccCchhHHHHHHHHHHHH
Confidence 3445666667777777777777777777 899999999999999999999999
Q ss_pred HhhhhchhHHHHHHHcCccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCccccchhhhHHHHHHHHH
Q psy16378 177 AIGAISMPLFTVYTILGYWPLGPMVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTKRAACMIVTAWGV 256 (578)
Q Consensus 177 l~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~ 256 (578)
+. ++.+|+.+.....+.|.++...|++..++..++..+|++++++||+|||++|++|++|+..++++++..+++++|++
T Consensus 173 l~-~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~ 251 (434)
T 4ea3_A 173 LV-LLTLPFQGTDILLGFWPFGNALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWAL 251 (434)
T ss_dssp HH-HTTHHHHHHHHHHTSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHH
T ss_pred HH-HHHhHHHHHHHHhcCCcCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhH
Confidence 98 78899999999889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhHHhhcccccccccccceeeeeccccch----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy16378 257 SMILWPPWIFAWPYIEGERRVPYYECYIQFIETN----HYITFLTAIAAFYIPVSVMIFLYLRIYKETEKR 323 (578)
Q Consensus 257 s~~~~~p~~~~~~~~~~~~~~~~~~C~~~~~~~~----~~~~~~~~~~~~~lPl~ii~~~y~~I~~~l~~~ 323 (578)
++++++|.++....... .....|...+.... ..+.+...++.+++|+++++++|.+|++.+|++
T Consensus 252 s~~~~~p~~~~~~~~~~---~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~ 319 (434)
T 4ea3_A 252 ASVVGVPVAIMGSAQVE---DEEIECLVEIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGV 319 (434)
T ss_dssp HHHHHHHHHHHEEECCC---SSCCCEEECCCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHhhHheeeeeEee---cCceeEEEecCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999988775433322 22346776654432 345566777889999999999999999888654
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=100.00 E-value=1e-38 Score=343.70 Aligned_cols=201 Identities=28% Similarity=0.562 Sum_probs=167.3
Q ss_pred chHHHHHHHHHHHHHHhhhcCceEEEEEeeccchhHHHHHHHHHHHHHhhhheeeeEEecCCccchhHHHHHHHHHHHHH
Q psy16378 98 TTQVIIIATFAAFLSIVTVLGNILVMVSFKIDKTLQTISNYFLIVTVLGNILVMVSFKIDKTLQTISNYFLFSLAVADFA 177 (578)
Q Consensus 98 ~~~~~~~~~~~~~~~~~g~~gN~~vi~~~~~~~~l~~i~~~i~~~gi~gN~lvi~~i~~~~~lr~~~~~~i~~LAvaDll 177 (578)
....++.++++.+++++|++||+++++ ++.+++++|+++|+|++|||++|++
T Consensus 179 ~~~~~~~~i~~~ii~~~gi~gN~lvi~----------------------------vi~~~~~lr~~~~~ll~nLAiaDll 230 (514)
T 3sn6_R 179 EVWVVGMGIVMSLIVLAIVFGNVLVIT----------------------------AIAKFERLQTVTNYFITSLACADLV 230 (514)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHH----------------------------HHHHCGGGCCHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHHHHhHHHhhh----------------------------heecccccccHHHHHHHHHHHHHHH
Confidence 455667778888888888888888887 8889999999999999999999999
Q ss_pred hhhhchhHHHHHHHcCccccccccchhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcCccccchhhhHHHHHHHHHH
Q psy16378 178 IGAISMPLFTVYTILGYWPLGPMVCDTWLALDYLASNASVLNLLIISFDRYFSVTRPLTYRAKRTTKRAACMIVTAWGVS 257 (578)
Q Consensus 178 ~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~S~~~l~~iaidRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s 257 (578)
++++.+|+.+...+.+.|.++...|++..++..++..+|++++++||+|||++|++|++|+.+++++++..+++++|+++
T Consensus 231 ~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s 310 (514)
T 3sn6_R 231 MGLAVVPFGAAHILTKTWTFGNFWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVS 310 (514)
T ss_dssp TTTTHHHHHHHHHHHTSCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHhCHHHHHHHHcCCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999998899999999999999999
Q ss_pred HHhhhhHHhh-cccccccccccceeeeecc----ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy16378 258 MILWPPWIFA-WPYIEGERRVPYYECYIQF----IETNHYITFLTAIAAFYIPVSVMIFLYLRIYKETEKRKKEFSN 329 (578)
Q Consensus 258 ~~~~~p~~~~-~~~~~~~~~~~~~~C~~~~----~~~~~~~~~~~~~~~~~lPl~ii~~~y~~I~~~l~~~~~~~~~ 329 (578)
+++++++++. +...... ....|.... ......|.++..++.+++|+++++++|.+|++.+|++.++...
T Consensus 311 ~l~~~~p~~~~~~~~~~~---~~~~c~~~~~~~~~~~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~ 384 (514)
T 3sn6_R 311 GLTSFLPIQMHWYRATHQ---EAINCYAEETCCDFFTNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDK 384 (514)
T ss_dssp HHTTHHHHHTTTTC---C---HHHHHHHSSSCCCCCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhhhhccceecccC---cccceeecccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 9998666543 3222111 111232211 1224567777778899999999999999999999998876543
No 19
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=98.86 E-value=5.8e-10 Score=73.69 Aligned_cols=36 Identities=33% Similarity=0.719 Sum_probs=32.9
Q ss_pred HHHHHHHHhhhccccchhHHhhccHHHHHHHHHhhC
Q psy16378 543 LWDFFYYLCYINSTINPVCYALCNDAFRATYIRILT 578 (578)
Q Consensus 543 ~~~~~~~L~~~NS~iNPiIY~~~n~~FR~~~~~il~ 578 (578)
++.++.+++++||++||+||+++|++||++++++++
T Consensus 2 ~~~~~~~l~~~ns~lNPiIY~~~~~~fr~~~~~~~~ 37 (40)
T 2koe_A 2 VFAFASMLCLLNSTVNPIIYALRSKDLRHAFRSMFP 37 (40)
T ss_dssp HHHHHHHHHHHHHHSSTTTTBTTBHHHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHhh
Confidence 467788999999999999999999999999999874
No 20
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.36 E-value=1.1e-07 Score=59.15 Aligned_cols=31 Identities=45% Similarity=0.830 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCcCccccchh
Q psy16378 215 ASVLNLLIISFDRYFSVTRPLTYRAKRTTKR 245 (578)
Q Consensus 215 ~S~~~l~~iaidRy~aI~~P~~~~~~~t~~~ 245 (578)
+|++++++||+|||++|++|++|...+++++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~~ 32 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPRR 32 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCCC
Confidence 6899999999999999999999987777653
No 21
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=95.02 E-value=0.00094 Score=47.71 Aligned_cols=22 Identities=23% Similarity=0.342 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHhhhcCceEEEE
Q psy16378 103 IIATFAAFLSIVTVLGNILVMV 124 (578)
Q Consensus 103 ~~~~~~~~~~~~g~~gN~~vi~ 124 (578)
+..++|++++++|++||++|++
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~ 51 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLW 51 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHH
T ss_pred HHHHHHHHHHHHHHhhhhhhee
Confidence 7788999999999999999999
No 22
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=90.32 E-value=0.17 Score=52.46 Aligned_cols=24 Identities=17% Similarity=0.225 Sum_probs=11.8
Q ss_pred hhhhHHHHHHHHHHHHhhhhHHhh
Q psy16378 244 KRAACMIVTAWGVSMILWPPWIFA 267 (578)
Q Consensus 244 ~~~~~~i~~~W~~s~~~~~p~~~~ 267 (578)
+|+..+++++-+.-++..+|..+.
T Consensus 386 ~r~~k~l~~v~~~F~icwlP~~i~ 409 (484)
T 3vw7_A 386 SRALFLSAAVFCIFIICFGPTNVL 409 (484)
T ss_dssp HHHHHHHHHHHHHHHHTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHH
Confidence 344444454444444555665543
No 23
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=89.62 E-value=0.016 Score=35.52 Aligned_cols=10 Identities=20% Similarity=0.481 Sum_probs=8.8
Q ss_pred eeeecccccc
Q psy16378 525 ILVLLKPITT 534 (578)
Q Consensus 525 flv~w~P~~~ 534 (578)
|++||+|+.+
T Consensus 15 F~icW~P~~i 24 (33)
T 2ki9_A 15 LLICWFPVLA 24 (33)
T ss_dssp HTTTSSHHHH
T ss_pred HHHHHhHHHH
Confidence 8899999876
No 24
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=82.80 E-value=0.68 Score=47.22 Aligned_cols=33 Identities=21% Similarity=0.352 Sum_probs=24.1
Q ss_pred hHHHHHHHHHHHHHHhhhcCceEEEEEeeccch
Q psy16378 99 TQVIIIATFAAFLSIVTVLGNILVMVSFKIDKT 131 (578)
Q Consensus 99 ~~~~~~~~~~~~~~~~g~~gN~~vi~~~~~~~~ 131 (578)
...+++.+++.+++++|++||+++++.+.-++.
T Consensus 6 ~~~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~ 38 (452)
T 3rze_A 6 PQLMPLVVVLSTICLVTVGLNLLVLYAVRSERK 38 (452)
T ss_dssp ---CGGGTHHHHHHHHHHHHHHHHHHHHHHCST
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 344566788999999999999999986555443
No 25
>2ket_A Cathelicidin-6; antimicrobial peptide, antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted; NMR {Bos taurus}
Probab=63.17 E-value=2.9 Score=22.53 Aligned_cols=12 Identities=17% Similarity=0.609 Sum_probs=9.9
Q ss_pred HHHHHHHHHhhC
Q psy16378 567 DAFRATYIRILT 578 (578)
Q Consensus 567 ~~FR~~~~~il~ 578 (578)
++||+.|+++|+
T Consensus 4 krfrkkfkklfk 15 (27)
T 2ket_A 4 KRFRKKFKKLFK 15 (27)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 689999998873
No 26
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=60.43 E-value=12 Score=23.15 Aligned_cols=26 Identities=27% Similarity=0.494 Sum_probs=16.8
Q ss_pred HHHHH-HHHHHHHHHHHHHHHHhhhhh
Q psy16378 304 IPVSV-MIFLYLRIYKETEKRKKEFSN 329 (578)
Q Consensus 304 lPl~i-i~~~y~~I~~~l~~~~~~~~~ 329 (578)
+|+++ +++.|..+++--+|+.++.++
T Consensus 7 l~~v~~~~ifYFl~iRPQ~Kr~K~~~~ 33 (37)
T 2rdd_B 7 LMLVVFGLIFYFMILRPQQKRTKEHKK 33 (37)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 34443 467788888877777665543
No 27
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=40.28 E-value=4.4 Score=38.45 Aligned_cols=62 Identities=34% Similarity=0.573 Sum_probs=50.6
Q ss_pred HHhhhheee------eeeeccccccc-------CCCchhhHHHHHHHHhhhccccchhHHhhccHHHHHHHHHhhC
Q psy16378 516 AERKAAKTL------ILVLLKPITTC-------SECIPNGLWDFFYYLCYINSTINPVCYALCNDAFRATYIRILT 578 (578)
Q Consensus 516 ~~~k~~~~l------flv~w~P~~~~-------~~~~~~~~~~~~~~L~~~NS~iNPiIY~~~n~~FR~~~~~il~ 578 (578)
+++|+++++ |++||+|+.+. ....+..+..+..+++++||++||+||+ +|++||++++++|+
T Consensus 226 ~~~k~~~~~~~~~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nPiiY~-~~~~fR~~~~~~l~ 300 (315)
T 4amj_A 226 REHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSPDFRKAFKRLLA 300 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSSCHHHHHHHHHHHHHGGGTHHHHGG-GSHHHHHHHHHHHC
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhccccHHHHc-CcHHHHHHHHHHhC
Confidence 445555554 89999999872 2335567888888999999999999999 99999999999985
No 28
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=38.00 E-value=1.1e+02 Score=30.49 Aligned_cols=71 Identities=27% Similarity=0.317 Sum_probs=59.1
Q ss_pred hhhhHHHHHHhhhheee------eeeeccccccc-------C--CCchhhHHHHHHHHhhhccccchhHHhhccHHHHHH
Q psy16378 508 KKKSQEKKAERKAAKTL------ILVLLKPITTC-------S--ECIPNGLWDFFYYLCYINSTINPVCYALCNDAFRAT 572 (578)
Q Consensus 508 ~~~~~~~~~~~k~~~~l------flv~w~P~~~~-------~--~~~~~~~~~~~~~L~~~NS~iNPiIY~~~n~~FR~~ 572 (578)
.....+.++++|+++|+ |++||+|+.+. . ...+.+++.+..+|+++||++||+||+++|++||++
T Consensus 381 ~~~~~~~~~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~fR~~ 460 (488)
T 3eml_A 381 DAYRSTLQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIREFRQT 460 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCccccccHHHHHHHHHHHHHHhhhchhhhhhcCHHHHHH
Confidence 34445567888888888 89999999882 1 235566888899999999999999999999999999
Q ss_pred HHHhhC
Q psy16378 573 YIRILT 578 (578)
Q Consensus 573 ~~~il~ 578 (578)
++++|+
T Consensus 461 ~~~l~~ 466 (488)
T 3eml_A 461 FRKIIR 466 (488)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999984
No 29
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=34.24 E-value=1.4 Score=45.61 Aligned_cols=40 Identities=20% Similarity=0.345 Sum_probs=36.0
Q ss_pred chhhHHHHHHHHhhhccccchhHHhhccHHHHHHHHHhhC
Q psy16378 539 IPNGLWDFFYYLCYINSTINPVCYALCNDAFRATYIRILT 578 (578)
Q Consensus 539 ~~~~~~~~~~~L~~~NS~iNPiIY~~~n~~FR~~~~~il~ 578 (578)
.+..++.++.+|+|+||++||+||+++|++||++++++|+
T Consensus 453 ~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~fR~~~~~ll~ 492 (502)
T 3odu_A 453 TVHKWISITEALAFFHCCLNPILYAFLGAKFKTSAQHALT 492 (502)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHTTTTTCCCCCCHHHHHS
T ss_pred chHHHHHHHHHHHHHhcccchhhhhhcCHHHHHHHHHHhc
Confidence 3455678889999999999999999999999999999985
No 30
>3arc_M Photosystem II reaction center protein M; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_M* 2axt_M* 3bz1_M* 3bz2_M* 3kzi_M* 3prq_M* 3prr_M* 3a0b_M* 3a0h_M*
Probab=31.05 E-value=74 Score=19.39 Aligned_cols=22 Identities=18% Similarity=0.499 Sum_probs=16.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH
Q psy16378 295 FLTAIAAFYIPVSVMIFLYLRI 316 (578)
Q Consensus 295 ~~~~~~~~~lPl~ii~~~y~~I 316 (578)
++...++.++|.+.+++.|++.
T Consensus 8 fiAt~Lfi~iPt~FLlilYvqT 29 (36)
T 3arc_M 8 LIATALFVLVPSVFLIILYVQT 29 (36)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhee
Confidence 3444567789999999999864
No 31
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=25.92 E-value=11 Score=38.85 Aligned_cols=41 Identities=24% Similarity=0.557 Sum_probs=37.3
Q ss_pred CCchhhHHHHHHHHhhhccccchhHHhhccHHHHHHHHHhhC
Q psy16378 537 ECIPNGLWDFFYYLCYINSTINPVCYALCNDAFRATYIRILT 578 (578)
Q Consensus 537 ~~~~~~~~~~~~~L~~~NS~iNPiIY~~~n~~FR~~~~~il~ 578 (578)
.+.+..++.++.||+|+||++||+||++ |++||++|+++||
T Consensus 436 ~~~~~~~~~~~~~L~y~NS~iNPiIY~~-n~~FR~af~~il~ 476 (500)
T 2rh1_A 436 NLIRKEVYILLNWIGYVNSGFNPLIYCR-SPDFRIAFQELLC 476 (500)
T ss_dssp TSSCHHHHHHHHHHHHHGGGTHHHHGGG-SHHHHHHHHHHTT
T ss_pred CcccHHHHHHHHHHHHHHHhhcchhhhc-cHHHHHHHHHHHh
Confidence 3467788999999999999999999996 9999999999985
Done!