RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy16392
(181 letters)
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structur initiative;
1.90A {Vibrio parahaemolyticus}
Length = 230
Score = 55.3 bits (134), Expect = 7e-10
Identities = 10/45 (22%), Positives = 20/45 (44%)
Query: 1 MVMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
++++TG++ G+G A L R+ KL+ N +
Sbjct: 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSN 47
Score = 42.6 bits (101), Expect = 2e-05
Identities = 6/44 (13%), Positives = 13/44 (29%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMS 99
Y K V + + E+ ++ + P + T
Sbjct: 138 AQESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFW 181
>3imf_A Short chain dehydrogenase; structural genomics, infectious D
center for structural genomics of infectious diseases,
oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus
anthracis str}
Length = 257
Score = 53.3 bits (129), Expect = 4e-09
Identities = 16/53 (30%), Positives = 26/53 (49%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDSHVFK 54
V++TG + G+GK A AK +V+ RT +KL + EI+ +
Sbjct: 9 VIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQ 61
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET:
NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A*
1sep_A* 1z6z_A*
Length = 259
Score = 52.0 bits (125), Expect = 1e-08
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 2 VMVTGSTDGIGKAYAIELAKRK---MDLVLISRTLQKLNDTANEIKGLTNDSHVFKSPYF 58
++TG++ G G+A A +LA+ +++ +R+ L E+ D V +
Sbjct: 9 CVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAAD 68
Query: 59 VNYSGTKAFVGHFVNCLTREISHHNIQTQILI 90
+ GT+A V ++ + +Q +LI
Sbjct: 69 L---GTEAGVQRLLSAVRELPRPEGLQRLLLI 97
Score = 37.7 bits (88), Expect = 0.001
Identities = 8/45 (17%), Positives = 15/45 (33%), Gaps = 2/45 (4%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSK 100
+ Y KA L E +++ P +D +M +
Sbjct: 164 KGWGLYCAGKAARDMLYQVLAAE--EPSVRVLSYAPGPLDNDMQQ 206
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, center for structural genomics of infec
diseases, csgid; 2.80A {Bacillus anthracis}
Length = 267
Score = 51.4 bits (124), Expect = 2e-08
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDSHVF 53
VTGST GIGKA A L ++++ R + +N+T EI+ D+ +
Sbjct: 15 VTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQ 64
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain
dehydrogenase, HUM structural genomics, structural
genomics consortium, SGC; HET: AE2; 1.95A {Homo
sapiens} SCOP: c.2.1.2
Length = 272
Score = 51.1 bits (123), Expect = 2e-08
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDSHVFK 54
V++TG+ GIG+ A E AK K LVL L +TA + KGL H F
Sbjct: 34 VLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFV 86
Score = 38.4 bits (90), Expect = 5e-04
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREIS---HHNIQTQILIPSVVDTNMSKG 101
P+ + Y +K F LT E++ ++T L P+ V+T K
Sbjct: 175 PFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN 223
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum
pernix}
Length = 260
Score = 51.0 bits (123), Expect = 3e-08
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDSHVF 53
VT + G+G A A+ELA+ L+L SR +KL A+ I L + + V
Sbjct: 12 VTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVD 61
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid,
SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo
sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A*
3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A*
3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A*
3ch6_A* 2irw_A* 2ilt_A* ...
Length = 286
Score = 49.9 bits (120), Expect = 6e-08
Identities = 15/45 (33%), Positives = 25/45 (55%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGL 46
V+VTG++ GIG+ A LAK +V+ +R+ + L + L
Sbjct: 31 VIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL 75
Score = 38.0 bits (89), Expect = 7e-04
Identities = 10/48 (20%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 55 SPYFVNYSGTKAFVGHFVNCLTREISH--HNIQTQILIPSVVDTNMSK 100
P YS +K + F + + +E S N+ + + ++DT +
Sbjct: 171 YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAM 218
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE
beta, structural genomics, PSI-2; 1.90A {Pseudomonas
syringae PV}
Length = 247
Score = 49.4 bits (119), Expect = 8e-08
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
++VTG+ GIG A A A +VL+ RT L + +++IK
Sbjct: 17 ILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIK 59
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A
{Escherichia coli K12} PDB: 3f1k_A 3e9q_A* 3f5q_A
3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Length = 252
Score = 49.4 bits (119), Expect = 8e-08
Identities = 15/43 (34%), Positives = 27/43 (62%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
++VTG++DGIG+ A+ A+ ++L+ R +KL A+ I
Sbjct: 15 ILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHIN 57
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP]
reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc;
2.16A {Bacteroides thetaiotaomicron}
Length = 250
Score = 49.5 bits (119), Expect = 9e-08
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
++TG++ GIG A LA +VLI+R+ Q L +EI
Sbjct: 10 AIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIM 52
Score = 38.3 bits (90), Expect = 5e-04
Identities = 13/41 (31%), Positives = 20/41 (48%)
Query: 60 NYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSK 100
Y TK + L RE++ I+ L P V+T+M+K
Sbjct: 157 IYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAK 197
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases,
oxidoreductase; HET: NDP; 1.91A {Papaver somniferum}
Length = 311
Score = 49.6 bits (118), Expect = 9e-08
Identities = 14/52 (26%), Positives = 27/52 (51%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDSHVF 53
+VTG GIG +L+ + +VL R + K ++ ++K +++ VF
Sbjct: 15 AVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVF 66
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane
alkaloid biosynthesis, reduction of tropinone to
pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium}
SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Length = 260
Score = 49.4 bits (119), Expect = 1e-07
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGL 46
VTG + GIG ELA + SR ++LND + +
Sbjct: 14 VTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK 56
Score = 25.9 bits (58), Expect = 6.9
Identities = 13/45 (28%), Positives = 21/45 (46%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSK 100
PY Y TK + CL E + NI+ + P V+ T++ +
Sbjct: 154 PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVE 198
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid
biosynthesis, reduction of tropinone to tropine,
short-chain dehydrogenase; HET: NAP; 2.40A {Datura
stramonium} SCOP: c.2.1.2
Length = 273
Score = 48.7 bits (117), Expect = 2e-07
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGL 46
VTG + GIG A ELA + SR ++L++ +
Sbjct: 26 VTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK 68
Score = 26.3 bits (59), Expect = 5.1
Identities = 11/46 (23%), Positives = 19/46 (41%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKG 101
P YS +K + L E + NI+ + P V+ T + +
Sbjct: 166 PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVET 211
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes,
fatty acid synthesis, short-chain
dehydrogenases/reductases, structural genomics; HET:
ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Length = 303
Score = 48.4 bits (116), Expect = 2e-07
Identities = 17/43 (39%), Positives = 27/43 (62%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
+VTG GIGKA EL + ++V+ SR L++L A+E++
Sbjct: 21 AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQ 63
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent
reductase, short chain dehydrogenase/reductase,
oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter
frateurii} PDB: 3ai2_A* 3ai1_A*
Length = 263
Score = 48.3 bits (116), Expect = 2e-07
Identities = 16/41 (39%), Positives = 26/41 (63%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
+TGS+ GIG A A AK +VL++R + +L++ A +K
Sbjct: 12 ITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLK 52
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4;
1.60A {Thermococcus sibiricus}
Length = 235
Score = 47.9 bits (115), Expect = 2e-07
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
++TG++ GIG+A A LA+ L L +R++ +L A+E+
Sbjct: 5 AVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQ 48
Score = 31.3 bits (72), Expect = 0.13
Identities = 10/39 (25%), Positives = 14/39 (35%), Gaps = 2/39 (5%)
Query: 61 YSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMS 99
Y TK V E + +++ L P VDT
Sbjct: 151 YVSTKWAARALVRTFQIE--NPDVRFFELRPGAVDTYFG 187
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain
dehydrogenase, beta- oxidation, NADP, oxidoreductase;
HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB:
1w73_A* 1w8d_A*
Length = 302
Score = 48.0 bits (115), Expect = 3e-07
Identities = 14/46 (30%), Positives = 20/46 (43%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLT 47
+TG G+GK L+ V+ SR + L TA +I T
Sbjct: 29 AFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQT 74
Score = 26.0 bits (58), Expect = 7.5
Identities = 9/44 (20%), Positives = 17/44 (38%)
Query: 55 SPYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNM 98
S + V + KA V L E + ++ ++ P + T
Sbjct: 171 SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKG 214
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.08A {Sinorhizobium meliloti}
Length = 264
Score = 47.9 bits (115), Expect = 3e-07
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDSHVFK 54
+++TG++ GIG+ A EL ++L +R ++ A EI+ +
Sbjct: 7 ILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQV 59
Score = 30.2 bits (69), Expect = 0.27
Identities = 11/46 (23%), Positives = 20/46 (43%), Gaps = 6/46 (13%)
Query: 61 YSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMS----KGD 102
Y TK V + L +E NI+ + P VV++ ++ +
Sbjct: 153 YCATKFAVRAISDGLRQE--STNIRVTCVNPGVVESELAGTITHEE 196
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural
genomics, structural genomics consortium,
oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP:
c.2.1.2
Length = 279
Score = 48.0 bits (115), Expect = 3e-07
Identities = 15/52 (28%), Positives = 27/52 (51%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDSHVF 53
+VTG++ GIG A A L ++ + +V +RT+ + + A E K +
Sbjct: 35 ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLI 86
Score = 28.0 bits (63), Expect = 1.6
Identities = 13/51 (25%), Positives = 20/51 (39%), Gaps = 2/51 (3%)
Query: 51 HVFKSPYFVNYSGTKAFVGHFVNCLTREISH--HNIQTQILIPSVVDTNMS 99
V YS TK V L +E+ +I+ + P VV+T +
Sbjct: 177 RVLPLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFA 227
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta,
oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB:
3o4r_A*
Length = 260
Score = 47.1 bits (113), Expect = 5e-07
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGL 46
VT STDGIG A A LA+ +V+ SR + ++ T ++G
Sbjct: 19 VTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE 61
Score = 30.2 bits (69), Expect = 0.29
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 55 SPYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSK 100
P Y+ +K + L E++ NI+ L P ++ TN S+
Sbjct: 158 FPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQ 203
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC,
structural genomics, protein structure initiative;
1.87A {Rhodopseudomonas palustris}
Length = 252
Score = 47.3 bits (113), Expect = 5e-07
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
V V G+ D IG A + A + R +KL EI+
Sbjct: 10 VAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIE 52
Score = 35.3 bits (82), Expect = 0.006
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 1/48 (2%)
Query: 55 SPYFVNYSGTKAFVGHFVNCLTREISHHNIQTQ-ILIPSVVDTNMSKG 101
F ++ K + + RE+ NI ++I S VDT +
Sbjct: 149 GSGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRE 196
>3cxt_A Dehydrogenase with different specificities; rossman fold,
oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus
suis} PDB: 3cxr_A* 3o03_A*
Length = 291
Score = 47.2 bits (113), Expect = 6e-07
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 3 MVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGL 46
+VTG++ GIG A A AK +V + ++ K
Sbjct: 38 LVTGASYGIGFAIASAYAKAGATIVFNDINQELVDRGMAAYKAA 81
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI,
structural genomics, dehydr oxidoreductase; 1.90A
{Salmonella enterica subsp}
Length = 255
Score = 46.7 bits (112), Expect = 7e-07
Identities = 15/52 (28%), Positives = 24/52 (46%)
Query: 3 MVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDSHVFK 54
+VTGS G+G AYA LA ++L L ++ + + D+H
Sbjct: 13 LVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVA 64
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain,
structura genomics consortium, SGC, oxidoreductase;
1.80A {Homo sapiens}
Length = 260
Score = 46.5 bits (111), Expect = 9e-07
Identities = 14/41 (34%), Positives = 22/41 (53%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
VTG++ GIG+ A++L K + + R L L A E +
Sbjct: 10 VTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQ 50
Score = 25.7 bits (57), Expect = 9.6
Identities = 11/42 (26%), Positives = 15/42 (35%)
Query: 59 VNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSK 100
V Y KA E+ H + L P +V T + K
Sbjct: 159 VPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLK 200
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur
genomics, JCSG, PSI, protein structure initiative,
joint CE structural genomics; HET: NAD; 2.50A
{Thermotoga maritima} SCOP: c.2.1.2
Length = 249
Score = 46.4 bits (111), Expect = 9e-07
Identities = 9/41 (21%), Positives = 22/41 (53%)
Query: 3 MVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEI 43
+V ++ GIG+A A L++ ++ + +R + L + +
Sbjct: 23 LVLAASRGIGRAVADVLSQEGAEVTICARNEELLKRSGHRY 63
Score = 26.0 bits (58), Expect = 7.0
Identities = 6/43 (13%), Positives = 16/43 (37%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNM 98
+ + + F+ L+ E++ + I + P +T
Sbjct: 148 ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETER 190
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet
of seven strands in the order 3214567; HET: NDP; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 280
Score = 46.4 bits (111), Expect = 9e-07
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
V++TGS++GIG+ AI A+ ++ + R+ ++L +T I
Sbjct: 9 VIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIIL 51
Score = 30.6 bits (70), Expect = 0.20
Identities = 9/45 (20%), Positives = 21/45 (46%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSK 100
P F+ Y+ KA + + +++ I+ + P +V+T +
Sbjct: 157 PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTN 201
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family,
rossmann-fold, short-chain dehydrogenase/reducta
ALLO-threonine dehydrogenase; 1.90A {Escherichia coli}
PDB: 3asv_A*
Length = 248
Score = 46.0 bits (110), Expect = 1e-06
Identities = 10/44 (22%), Positives = 22/44 (50%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
V+VTG+T G G+ ++ ++ R ++L + +E+
Sbjct: 3 VLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGD 46
Score = 27.5 bits (62), Expect = 2.4
Identities = 10/36 (27%), Positives = 16/36 (44%)
Query: 61 YSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDT 96
Y TKAFV F L ++ ++ + P +V
Sbjct: 147 YGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGG 182
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural
genomics CEN infectious disease, oxidoreductase; HET:
EPE; 1.50A {Mycobacterium paratuberculosis}
Length = 291
Score = 46.5 bits (111), Expect = 1e-06
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
V++TG+ G+G A ELA+R +++ R +K A + G
Sbjct: 19 VVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAG 62
>2jah_A Clavulanic acid dehydrogenase; short-chain
dehydrogenase/reductase, lactamase inhibitor, AN
biosynthesis, NADPH, oxidoreductase; HET: MSE NDP;
1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Length = 247
Score = 45.6 bits (109), Expect = 2e-06
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDSHVFK 54
++TG++ GIG+A A LA + + +R ++KL +E+ HV +
Sbjct: 10 ALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLE 62
Score = 32.9 bits (76), Expect = 0.039
Identities = 10/38 (26%), Positives = 18/38 (47%)
Query: 61 YSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNM 98
Y TK V F L +E++ ++ ++ P DT +
Sbjct: 155 YQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTEL 192
>1xq1_A Putative tropinone reducatse; structural genomics, protein
structure initiative, CESG, AT1 reductively methylated
protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2
PDB: 2q45_A
Length = 266
Score = 45.6 bits (109), Expect = 2e-06
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGL 46
VTG T GIG A E A + +R +LN+ ++ +
Sbjct: 19 VTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK 61
Score = 27.5 bits (62), Expect = 2.4
Identities = 10/42 (23%), Positives = 19/42 (45%)
Query: 59 VNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSK 100
YS TK + L E + I+ + P+V+ T +++
Sbjct: 162 SIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAE 203
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structure initiative;
1.90A {Novosphingobium aromaticivorans DSM12444}
Length = 319
Score = 45.9 bits (109), Expect = 2e-06
Identities = 7/52 (13%), Positives = 18/52 (34%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDSHVF 53
VTG +G+G +L + + + ++ ++ + V
Sbjct: 11 AFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVM 62
Score = 36.6 bits (85), Expect = 0.003
Identities = 10/50 (20%), Positives = 18/50 (36%)
Query: 55 SPYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKGDHF 104
+ Y+ TK V L + + I +L P +V + + D
Sbjct: 159 AGSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDI 208
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase;
HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Length = 244
Score = 45.6 bits (109), Expect = 2e-06
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
VTG+ GIG+ L +V ++RT L A E G
Sbjct: 12 VTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPG 53
Score = 27.8 bits (63), Expect = 1.7
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSK 100
P + YS TK + + E+ H I+ + P+VV T+M K
Sbjct: 144 PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGK 188
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural
genomics, PSI-2, protein structure initiative; 2.30A
{Aeromonas hydrophila subsp}
Length = 235
Score = 45.3 bits (108), Expect = 2e-06
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
++VTG+ G+G+A I L +R + ++ R Q+L +
Sbjct: 6 IIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGN 49
Score = 41.4 bits (98), Expect = 4e-05
Identities = 8/46 (17%), Positives = 16/46 (34%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKG 101
Y +K + F+ L E+ ++ L PS + +
Sbjct: 143 ANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDN 188
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A
{Pseudomonas aeruginosa}
Length = 272
Score = 45.3 bits (108), Expect = 2e-06
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
+ +TG+T G G+A A A+ LVL R ++L A E+
Sbjct: 24 LFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA 67
Score = 34.1 bits (79), Expect = 0.017
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
Query: 61 YSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMS----KGD 102
Y GTKAFV F L ++ ++ L P + ++ S GD
Sbjct: 171 YGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGD 216
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold,
peroxisomal beta-oxidation, oxidoreductas; HET: NAP
COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Length = 277
Score = 45.3 bits (108), Expect = 2e-06
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
+TG GIG A + V+ SR+L ++ A ++
Sbjct: 30 AFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLA 72
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics
center for infectious DI dehydrogenase, oxidoreductase;
HET: 1PE; 1.85A {Mycobacterium smegmatis}
Length = 264
Score = 45.2 bits (108), Expect = 3e-06
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
V+++G +G A A++ DLVL +RT+++L D A ++
Sbjct: 14 VVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVT 56
Score = 27.9 bits (63), Expect = 1.9
Identities = 7/47 (14%), Positives = 15/47 (31%)
Query: 55 SPYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKG 101
+ Y K+ + L E+ I+ ++P + K
Sbjct: 154 QAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKS 200
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A
{Chlorobium tepidum} SCOP: c.2.1.2
Length = 244
Score = 44.9 bits (107), Expect = 3e-06
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 7/60 (11%)
Query: 2 VMVTGSTDGIGKAYAIELAKR-------KMDLVLISRTLQKLNDTANEIKGLTNDSHVFK 54
+++TG+ GIG+A A+E A+ + LVL SRT L + E + +
Sbjct: 5 LLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTIT 64
Score = 36.8 bits (86), Expect = 0.002
Identities = 8/42 (19%), Positives = 13/42 (30%)
Query: 60 NYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKG 101
Y +K V + N++ + P V T M
Sbjct: 157 IYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK 198
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG,
short-chain alcohol reductase, fatty acid biosynthesis,
apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Length = 285
Score = 44.9 bits (107), Expect = 3e-06
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDSHVFKS 55
+VTG+ GIG+ A LAK ++ ISRT + + +EIK +S +
Sbjct: 47 ALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAG 100
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold,
tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides}
PDB: 2wdz_A* 3lqf_A*
Length = 254
Score = 44.8 bits (107), Expect = 3e-06
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 3 MVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
VTG+ GIG A L+LI R L+ A E+
Sbjct: 15 AVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGA 57
Score = 26.3 bits (59), Expect = 5.5
Identities = 10/56 (17%), Positives = 19/56 (33%)
Query: 59 VNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKGDHFMRKMHDWLRA 114
+Y +K V L E + ++ L P V T M+ ++ +
Sbjct: 157 SSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLD 212
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A
{Uncultured bacterium BIO5}
Length = 262
Score = 44.5 bits (106), Expect = 4e-06
Identities = 16/43 (37%), Positives = 24/43 (55%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
+VTG++ GIG A A +L +VL +R ++KL EI
Sbjct: 32 AVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIV 74
Score = 33.7 bits (78), Expect = 0.020
Identities = 8/42 (19%), Positives = 17/42 (40%)
Query: 60 NYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKG 101
Y+ +K + + E+ H ++ ++ P V T G
Sbjct: 178 AYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVG 219
>1xhl_A Short-chain dehydrogenase/reductase family member putative
tropinone reductase-II...; parallel beta-sheet of seven
strands in the order 3214567; HET: NDP TNE; 2.40A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 297
Score = 44.5 bits (106), Expect = 4e-06
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
V++TGS++GIG++ A+ AK + + R +L +T +I
Sbjct: 29 VIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQIL 71
Score = 31.4 bits (72), Expect = 0.12
Identities = 8/45 (17%), Positives = 17/45 (37%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSK 100
+ Y+ KA + + C ++ H ++ + P V T
Sbjct: 175 SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMG 219
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein]
reductase; RHLG-NADP complex, oxidoreductase; HET: NAP;
2.30A {Pseudomonas aeruginosa}
Length = 276
Score = 44.5 bits (106), Expect = 4e-06
Identities = 12/45 (26%), Positives = 21/45 (46%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGL 46
+VTG + GIG+ A L + + + +R + DTA +
Sbjct: 32 ALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAY 76
Score = 27.9 bits (63), Expect = 1.5
Identities = 8/42 (19%), Positives = 18/42 (42%)
Query: 60 NYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKG 101
Y +KA + L +E+ +I ++ P + M++
Sbjct: 181 AYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRH 222
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted
open sheet structure, oxidoreductase; 1.90A
{Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4
PDB: 1lua_A*
Length = 287
Score = 44.1 bits (104), Expect = 7e-06
Identities = 12/47 (25%), Positives = 18/47 (38%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTN 48
+V T +G A LA ++VL R L K A+ +
Sbjct: 122 AVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFK 168
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid,
3-ketoacyl-(acyl-carrier- protein) reductase,
oxidoreductase, structural genomics; 2.05A
{Burkholderia pseudomallei}
Length = 270
Score = 44.1 bits (105), Expect = 7e-06
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDSHVFKS 55
+VTG++ GIG+A A+ELA+R ++ + T K +
Sbjct: 31 AIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVL 84
>3d3w_A L-xylulose reductase; uronate cycle, short-chain
dehydrogenase/reductase(SDR) superfamily, glucose
metabolism, acetylation, carbohydrate metabolism; HET:
NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Length = 244
Score = 44.0 bits (105), Expect = 7e-06
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
VTG+ GIG+ L +V +SRT L+ E G
Sbjct: 12 VTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPG 53
Score = 28.6 bits (65), Expect = 1.1
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSK 100
Y TK + + E+ H I+ + P+VV T+M +
Sbjct: 144 TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQ 188
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5
P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A*
3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Length = 276
Score = 43.9 bits (104), Expect = 7e-06
Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 1/54 (1%)
Query: 2 VMVTGSTDGIGKAYAIELAKRK-MDLVLISRTLQKLNDTANEIKGLTNDSHVFK 54
+VTG GIG A +L + D+VL +R + + +++ +
Sbjct: 7 ALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQ 60
Score = 26.6 bits (59), Expect = 5.1
Identities = 13/50 (26%), Positives = 20/50 (40%), Gaps = 5/50 (10%)
Query: 61 YSGTKAFVGHFVNCLTREISHHNIQTQILI----PSVVDTNMSKGDHFMR 106
Y TK V R++S +IL+ P V T+M+ G +
Sbjct: 193 YGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWVRTDMA-GPKATK 241
>2ehd_A Oxidoreductase, oxidoreductase, short-chain
dehydrogenase/reducta; rossman fold, structural
genomics, NPPSFA; 2.40A {Thermus thermophilus}
Length = 234
Score = 43.7 bits (104), Expect = 7e-06
Identities = 15/44 (34%), Positives = 28/44 (63%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
V++TG++ GIG+A A L + + L++R ++L A E++G
Sbjct: 8 VLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEG 51
Score = 36.0 bits (84), Expect = 0.004
Identities = 7/41 (17%), Positives = 17/41 (41%)
Query: 61 YSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKG 101
Y+ +K + ++ N++ ++P VDT +
Sbjct: 150 YNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGN 190
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta
protein, NAD(P)-binding rossmann fold, csgid,
oxidoreductase; 1.95A {Francisella tularensis subsp}
Length = 247
Score = 43.6 bits (104), Expect = 8e-06
Identities = 12/54 (22%), Positives = 21/54 (38%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDSHVFKS 55
+VTG++ GIG A LA + +V + + N +K +
Sbjct: 8 ALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVL 61
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG
structure initiative, PSI, joint center for structural
GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga
maritima} SCOP: c.2.1.2
Length = 267
Score = 43.7 bits (104), Expect = 8e-06
Identities = 13/41 (31%), Positives = 25/41 (60%)
Query: 3 MVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEI 43
+VTG + G+G A LA+ +V+ SR L++ ++ A ++
Sbjct: 25 LVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKL 65
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 2.00A {Mycobacterium ulcerans}
Length = 281
Score = 43.7 bits (104), Expect = 9e-06
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGL 46
+VTG GIGK A L ++++ R KL E++ L
Sbjct: 14 YLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEAL 58
Score = 28.3 bits (64), Expect = 1.3
Identities = 9/60 (15%), Positives = 22/60 (36%)
Query: 55 SPYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKGDHFMRKMHDWLRA 114
+F Y TK+ V H + E+ ++ + P ++ T++ ++
Sbjct: 158 HRWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAM 217
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B),
NAD(P)-binding rossmann-fold structural genomics,
NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Length = 207
Score = 42.9 bits (102), Expect = 1e-05
Identities = 7/43 (16%), Positives = 17/43 (39%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNM 98
P F Y+ K + ++ +E+ + ++ V T +
Sbjct: 129 PGFAAYAAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGL 171
Score = 39.5 bits (93), Expect = 2e-04
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLT 47
V++TG+T G+G A+A L L+L R L + A E+
Sbjct: 3 VLITGATGGLGGAFARALKGHD--LLLSGRRAGALAELAREVGARA 46
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate
5-dehydratase, NAD(P) dependent, enzyme initiative,
EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia
cavernae}
Length = 273
Score = 43.3 bits (103), Expect = 1e-05
Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 3 MVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGL 46
+VTG+ GIG+A A A+ ++ RT + + A+EI
Sbjct: 35 VVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADG 77
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; 1.95A {Mycobacterium marinum}
Length = 276
Score = 43.3 bits (103), Expect = 1e-05
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDSHVFK 54
++TG++ GIGK A+ A+ + + +R L A+EI G+ + +
Sbjct: 35 ALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIR 87
Score = 27.9 bits (63), Expect = 1.9
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 59 VNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSK 100
+Y +KA V H + E++ H I+ + P + T + +
Sbjct: 182 SHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVE 223
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet
of seven strands in the order 3214567; 2.10A
{Caenorhabditis elegans} SCOP: c.2.1.2
Length = 278
Score = 43.3 bits (103), Expect = 1e-05
Identities = 13/43 (30%), Positives = 26/43 (60%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
++TGS++GIG+A A+ A+ + + R ++L +T +I
Sbjct: 9 AIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQIL 51
Score = 32.9 bits (76), Expect = 0.041
Identities = 11/46 (23%), Positives = 18/46 (39%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKG 101
P F YS KA + + ++ H I+ + P +V T
Sbjct: 157 PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSA 202
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Length = 272
Score = 43.4 bits (103), Expect = 1e-05
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
+VTG+ G+G+A A+ LA + L R L L +TA EI
Sbjct: 31 AIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGD 74
Score = 29.1 bits (66), Expect = 0.74
Identities = 10/47 (21%), Positives = 18/47 (38%)
Query: 55 SPYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKG 101
PY Y+ TK + + + H+I + DT M++
Sbjct: 171 RPYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQK 217
>3tjr_A Short chain dehydrogenase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium
subsp}
Length = 301
Score = 43.1 bits (102), Expect = 1e-05
Identities = 17/45 (37%), Positives = 21/45 (46%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGL 46
+VTG GIG A A E A+R LVL L N ++G
Sbjct: 34 AVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ 78
Score = 35.0 bits (81), Expect = 0.007
Identities = 13/52 (25%), Positives = 20/52 (38%)
Query: 55 SPYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKGDHFMR 106
+ Y K V L RE+ + I +L P VV+T + +R
Sbjct: 175 NAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIR 226
>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol,
oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila
lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A*
1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*
Length = 254
Score = 42.6 bits (101), Expect = 2e-05
Identities = 10/43 (23%), Positives = 17/43 (39%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
V+ + GIG + EL KR + +I ++ A
Sbjct: 8 VIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKA 50
Score = 36.5 bits (85), Expect = 0.002
Identities = 10/44 (22%), Positives = 16/44 (36%)
Query: 55 SPYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNM 98
YS +KA V F N L + + + P + T +
Sbjct: 145 IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPL 188
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Length = 281
Score = 43.0 bits (102), Expect = 2e-05
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
VTG G+G+ A L+ +V+ R L+ A EI G
Sbjct: 38 VTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGG 79
Score = 26.4 bits (59), Expect = 5.4
Identities = 8/46 (17%), Positives = 15/46 (32%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKG 101
P Y+ TK + + H+I + T+M+
Sbjct: 181 PNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTAR 226
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain
oxidoreductase, rossmann oxidoreductase; HET: NAP;
2.60A {Saccharomyces cerevisiae}
Length = 287
Score = 43.0 bits (102), Expect = 2e-05
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 2 VMVTGSTDGIGKAYAIELAKR---KMDLVLISRTLQKLNDTANEIKGLTNDSHVF 53
V++TG++ GIGKA A+E + M L+L +R L+KL + I ++ V
Sbjct: 36 VLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVH 90
Score = 33.4 bits (77), Expect = 0.029
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 4/46 (8%)
Query: 61 YSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMS----KGD 102
Y +K VG F + L +E+ + I+ ++ P +V+T S +G+
Sbjct: 188 YCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGN 233
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET:
NDP; 2.40A {Streptomyces griseoruber}
Length = 279
Score = 42.6 bits (101), Expect = 2e-05
Identities = 13/51 (25%), Positives = 24/51 (47%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDSHVFK 54
VTG + GIG A A LA R + + +R + ++ + ++ +D
Sbjct: 29 VTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSS 79
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD;
1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Length = 256
Score = 42.5 bits (101), Expect = 2e-05
Identities = 14/45 (31%), Positives = 20/45 (44%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGL 46
+VTG+ GIGKA A+ L K + + A+EI
Sbjct: 5 ALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA 49
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase,
combinatorial biosynthesis, short chain
dehydrogenase/reductase; HET: NAP EMO; 2.10A
{Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A*
1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A*
1xr3_A*
Length = 277
Score = 42.2 bits (100), Expect = 3e-05
Identities = 14/51 (27%), Positives = 24/51 (47%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDSHVFK 54
VTG+T GIG A L K + + + +R + L T E++ ++
Sbjct: 27 VTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT 77
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein]
reductase; PSI-biology, structural genomics, protein
structure initiati nysgrc; 2.70A {Sinorhizobium
meliloti}
Length = 283
Score = 42.2 bits (100), Expect = 3e-05
Identities = 14/43 (32%), Positives = 26/43 (60%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
++TG+ GIG+A A+ LA + + + RT ++ + A+EI
Sbjct: 31 ALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIV 73
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain
dehydrogenase/reductase, bIle acid catabolism,
oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli}
SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Length = 255
Score = 41.7 bits (99), Expect = 3e-05
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
+TG+ GIGK AI A +V+ N +EI+
Sbjct: 16 ITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQ 56
Score = 27.1 bits (61), Expect = 3.5
Identities = 10/46 (21%), Positives = 21/46 (45%)
Query: 55 SPYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSK 100
+ +Y+ +KA H V + ++ NI+ + P + T+ K
Sbjct: 153 NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALK 198
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 2.40A {Thermus thermophilus} SCOP:
c.2.1.2
Length = 245
Score = 41.7 bits (99), Expect = 4e-05
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGL 46
V++TG+ GIG+A AK LV L + A +
Sbjct: 8 VLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAH 52
>3e9n_A Putative short-chain dehydrogenase/reductase; structural
genomics, unknown function, oxidoreductase, PSI- 2;
2.40A {Corynebacterium glutamicum}
Length = 245
Score = 41.8 bits (99), Expect = 4e-05
Identities = 11/46 (23%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLT 47
+VTG+T G+G +L+ R + + R + L A
Sbjct: 8 AVVTGATGGMGIEIVKDLS-RDHIVYALGRNPEHLAALAEIEGVEP 52
Score = 36.8 bits (86), Expect = 0.002
Identities = 8/44 (18%), Positives = 20/44 (45%)
Query: 60 NYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKGDH 103
Y+ +K + + +E +++ I+ + P +T M +G
Sbjct: 145 IYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLM 188
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A
{Gluconobacter oxydans}
Length = 260
Score = 41.7 bits (99), Expect = 4e-05
Identities = 8/43 (18%), Positives = 16/43 (37%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
+VTG IG A LA+ +++ +++
Sbjct: 16 AIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLR 58
Score = 28.3 bits (64), Expect = 1.5
Identities = 10/43 (23%), Positives = 23/43 (53%)
Query: 59 VNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKG 101
Y+ +KA V ++ L E + H I+ + P+ ++T +++
Sbjct: 163 AAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRF 205
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain
dehydrogenase/reductase, steroid metabolism, LIP
metabolism, structural genomics; HET: NAD; 2.00A {Homo
sapiens}
Length = 264
Score = 41.4 bits (98), Expect = 5e-05
Identities = 11/45 (24%), Positives = 19/45 (42%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGL 46
+VTG+ GIG+A ++ LA + +T + G
Sbjct: 10 ALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGP 54
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics
center for infectious disease, ssgcid, oxidoreductase,
structural genomics; 2.20A {Brucella melitensis}
Length = 256
Score = 41.3 bits (98), Expect = 5e-05
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGL 46
VTG+ GIG+A A AK +V+ + A I+
Sbjct: 17 VTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA 59
Score = 26.7 bits (60), Expect = 4.1
Identities = 8/43 (18%), Positives = 17/43 (39%)
Query: 59 VNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKG 101
+Y +KA V H + ++ I+ + P + T+
Sbjct: 158 ASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALAT 200
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein]
reductase; structural genomics; 2.25A {Mycobacterium
avium subsp}
Length = 253
Score = 41.3 bits (98), Expect = 5e-05
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
+VTGS GIG+AYA LA+ +V+ + A +I
Sbjct: 12 GIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIV 54
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold,
oxidoreductase; HET: NAD; 1.75A {Sulfolobus
acidocaldarius}
Length = 254
Score = 40.9 bits (97), Expect = 6e-05
Identities = 14/43 (32%), Positives = 23/43 (53%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
V+VTG+ GIG+A A + A +V + +LN E++
Sbjct: 10 VIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELR 52
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold,
oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Length = 266
Score = 41.0 bits (97), Expect = 7e-05
Identities = 12/41 (29%), Positives = 25/41 (60%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANE 42
V++TG++ GIG+A A ++ L+L++R +++L
Sbjct: 19 VVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALNLP 59
Score = 33.0 bits (76), Expect = 0.032
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 61 YSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNM 98
Y GTK V + E++ N++ + PS V T +
Sbjct: 159 YCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTEL 196
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE
NAP; 1.60A {Vibrio cholerae o1 biovar el tor} PDB:
3rsh_A* 3rro_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A*
1i01_A* 1q7c_A* 2cf2_E
Length = 248
Score = 40.9 bits (97), Expect = 8e-05
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
+VTG++ GIGKA A LA+R ++ + + ++ +
Sbjct: 12 ALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGD 55
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle
structural genomics CEN infectious disease,
oxidoreductase; 2.30A {Mycobacterium smegmatis}
Length = 266
Score = 41.0 bits (97), Expect = 8e-05
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEI 43
+TG+T GIG A A LVL R + +L+ +
Sbjct: 25 ITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRAL 64
Score = 28.3 bits (64), Expect = 1.5
Identities = 14/45 (31%), Positives = 21/45 (46%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSK 100
P Y +KA + L RE+ H I+ + P+VV T M +
Sbjct: 166 PDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQ 210
>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein,
unknown function, structural genomics, MCSG, protein
structure initiative; 2.00A {Saccharomyces cerevisiae}
Length = 254
Score = 40.7 bits (96), Expect = 9e-05
Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLI--SRTLQKLNDTANEIKG 45
++VTG + GIGK+ L D V+ +R+ L +
Sbjct: 5 ILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGD 50
Score = 37.2 bits (87), Expect = 0.001
Identities = 12/45 (26%), Positives = 20/45 (44%), Gaps = 2/45 (4%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSK 100
+ Y +KA + HF L E ++ + P +VDT+M
Sbjct: 145 SSWGAYGSSKAALNHFAMTLANE--ERQVKAIAVAPGIVDTDMQV 187
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase;
3-ketoacyl-(acyl-carrier-protein) reductase, FAT
biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia
prowazekii}
Length = 249
Score = 40.6 bits (96), Expect = 9e-05
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
++TG++ GIG A A L K +++ +KL N +K
Sbjct: 17 SLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKD 60
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition,
oxidoreductase; HET: NAD; 2.00A {Brevibacterium
saccharolyticum}
Length = 258
Score = 40.2 bits (95), Expect = 1e-04
Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVL--ISRTLQKLNDTANEIKGL 46
MVTG GIG+ + +LA D+ + + + ++ +T I+
Sbjct: 5 AMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA 51
Score = 28.7 bits (65), Expect = 0.98
Identities = 11/43 (25%), Positives = 15/43 (34%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNM 98
P YS TK V +E++ P +V T M
Sbjct: 149 PILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGM 191
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding
domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter
oxydans} SCOP: c.2.1.2
Length = 262
Score = 40.2 bits (95), Expect = 1e-04
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
+VTG+ IG A A+ LA+ + L+ + L ++
Sbjct: 10 CLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVR 52
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET:
NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Length = 265
Score = 39.8 bits (94), Expect = 2e-04
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
VTG + GIG A L + + +R ++L + ++
Sbjct: 13 VTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALR 53
Score = 28.3 bits (64), Expect = 1.4
Identities = 8/46 (17%), Positives = 21/46 (45%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKG 101
P+ V S +A V + V + E + ++ ++ +V++ +
Sbjct: 154 PHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRR 199
>3ak4_A NADH-dependent quinuclidinone reductase; SDR,
(R)-3-quinuclidinol, chiral alcohol, oxidoreductase;
HET: NAD; 2.00A {Agrobacterium tumefaciens}
Length = 263
Score = 39.8 bits (94), Expect = 2e-04
Identities = 10/44 (22%), Positives = 17/44 (38%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
+VTG + GIG A A L K + + + ++
Sbjct: 15 AIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLEN 58
Score = 27.1 bits (61), Expect = 3.2
Identities = 14/43 (32%), Positives = 21/43 (48%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNM 98
P +YS +K V + L RE++ NI+ + P V T M
Sbjct: 154 PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAM 196
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl
carrier protein) reductase, short-chain
dehydrogenase/reductase (SDR); 2.4A {Bacillus
anthracis}
Length = 246
Score = 39.8 bits (94), Expect = 2e-04
Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVL-ISRTLQKLNDTANEIKGLTNDSHVFKS 55
+VTG++ GIG+A AI+LAK+ ++V+ + QK N+ +EIK L +D+ ++
Sbjct: 7 ALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRA 61
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human
hydroxysteroid dehydrogenase like 2, SDHL2, STR
genomics, structural genomics consortium; HET: NAP;
2.25A {Homo sapiens}
Length = 346
Score = 39.8 bits (93), Expect = 2e-04
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 7/50 (14%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQK-------LNDTANEIK 44
V +TG++ GIGKA A++ AK ++V+ ++T Q + A EI+
Sbjct: 48 VFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE 97
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
csgid, center for structural genomics O infectious
diseases; 1.90A {Staphylococcus aureus subsp} PDB:
3sj7_A*
Length = 246
Score = 39.4 bits (93), Expect = 2e-04
Identities = 15/55 (27%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVL-ISRTLQKLNDTANEIKGLTNDSHVFKS 55
+VTG++ GIG++ A++LA+ ++ + + + +K EIK DS ++
Sbjct: 7 ALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQA 61
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics,
oxidoreductase, S structural genomics center for
infectious disease, ssgcid; 2.09A {Bartonella henselae}
PDB: 3enn_A 3emk_A
Length = 266
Score = 39.4 bits (93), Expect = 2e-04
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
+VTG+T GIG+A A + + L KL + A ++
Sbjct: 30 ALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGK 73
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA,
nation project on protein structural and functional
analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB:
1x1e_A* 2ekq_A
Length = 239
Score = 39.4 bits (93), Expect = 2e-04
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 3 MVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKL 36
+VTG + GIG+A A L R + + SR ++
Sbjct: 6 LVTGGSRGIGRAIAEALVARGYRVAIASRNPEEA 39
Score = 26.3 bits (59), Expect = 6.4
Identities = 9/40 (22%), Positives = 16/40 (40%)
Query: 59 VNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNM 98
Y+ K + L +E + I+ +L P V+T
Sbjct: 142 PAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEF 181
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease; 1.75A {Mycobacterium smegmatis}
Length = 262
Score = 39.5 bits (93), Expect = 3e-04
Identities = 11/43 (25%), Positives = 22/43 (51%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
V+VTG T GIG+ A A+ ++ + R+ ++ ++
Sbjct: 13 VVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLD 55
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase,
oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium}
SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A
3aut_A* 3auu_A*
Length = 261
Score = 39.4 bits (93), Expect = 3e-04
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRT-LQKLNDTANEIK 44
V++TGS+ G+GK+ AI A K +V+ R+ + N EIK
Sbjct: 10 VVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIK 53
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold,
rossmann fold, oxidoreductase; HET: NAP; 2.30A
{Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Length = 244
Score = 39.0 bits (92), Expect = 3e-04
Identities = 15/55 (27%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVL-ISRTLQKLNDTANEIKGLTNDSHVFKS 55
V+VTG++ GIGKA A+ L K +++ +R+ + + + +I+ + F
Sbjct: 4 VVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGG 58
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW
YORK structural genomi research consortium, nysgrc,
oxidoreductase; HET: NAP; 1.93A {Sinorhizobium
meliloti}
Length = 280
Score = 39.1 bits (92), Expect = 4e-04
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
+VTG++ GIG+A A+ A+ +V+ +R L + +EI G
Sbjct: 11 AIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAG 54
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid
synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH
binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus
subtilis} PDB: 3oic_A*
Length = 258
Score = 38.6 bits (91), Expect = 4e-04
Identities = 19/44 (43%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLI-SRTLQKLNDTANEIKGL 46
VTGS+ G+GKA AI LA+ ++V+ +R+ + +TA EI+ L
Sbjct: 9 VTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL 52
Score = 27.5 bits (62), Expect = 2.1
Identities = 9/45 (20%), Positives = 16/45 (35%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSK 100
+ +KA + L E+S I + +DT+ K
Sbjct: 149 ENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALK 193
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics,
southeast collaboratory for structural genomics, secsg,
PSI; 1.90A {Clostridium thermocellum}
Length = 247
Score = 38.6 bits (91), Expect = 4e-04
Identities = 20/55 (36%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLI-SRTLQKLNDTANEIKGLTNDSHVFKS 55
+VTGS+ G+GKA A +L ++VL S L+ TA E K + V K
Sbjct: 8 AIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKG 62
>3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein;
structural genomics, ssgcid; 1.70A {Mycobacterium
smegmatis} PDB: 3lls_A 3q6i_A* 3m1l_A
Length = 454
Score = 38.8 bits (91), Expect = 4e-04
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVL--ISRTLQKLNDTANEIKG 45
VTG+ GIG A A+ +V + + L A+++ G
Sbjct: 218 VTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGG 261
>3rih_A Short chain dehydrogenase or reductase; structural genomics,
seattle structural genomics center for infectious
disease, ssgcid; HET: PG5; 2.15A {Mycobacterium
abscessus}
Length = 293
Score = 38.8 bits (91), Expect = 4e-04
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
V+VTG T GIG+ A A+ ++ + +R+ ++L+ E+
Sbjct: 44 VLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELG 86
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural
genomics, southea collaboratory for structural
genomics, secsg; 1.91A {Thermus thermophilus HB8}
Length = 245
Score = 38.6 bits (91), Expect = 5e-04
Identities = 13/46 (28%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVL-ISRTLQKLNDTANEIKGL 46
++TG++ GIG+A A+ LA+ L + + +K + A E +
Sbjct: 4 ALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR 49
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain
dehydrogenases/reductases (SDR), X-RAY crystallography,
oxidoreductase; 2.69A {Candida parapsilosis}
Length = 279
Score = 38.3 bits (90), Expect = 5e-04
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
VTGS+ GIG A A A+ D+ + + + K
Sbjct: 37 ASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQK 79
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase;
reductase,hyperthermophIle, structural genomics, PSI,
protei structure initiative; 2.30A {Thermus
thermophilus} SCOP: c.2.1.2
Length = 263
Score = 38.3 bits (90), Expect = 6e-04
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
++VTG+ GIG+A A+ LV + R + L + ++
Sbjct: 9 ILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEA 52
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase,
structural genomics, SH dehydrogenase/reductase,
inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP:
c.2.1.2
Length = 267
Score = 38.0 bits (89), Expect = 6e-04
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
+VTG+ GIG+A+A L + + L+ L+ +
Sbjct: 10 ALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALH 52
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia
aquatica} SCOP: c.2.1.2
Length = 267
Score = 37.9 bits (89), Expect = 7e-04
Identities = 12/43 (27%), Positives = 22/43 (51%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
V++TG G+G+A A+ LA L L+ + + L + +
Sbjct: 16 VLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVL 58
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold,
oxoacyl-ACP reductase, NADP binding, fatty AC
biosynthsis, oxidoreductase; HET: NAP; 2.38A
{Synechococcus elongatus} PDB: 4dml_A*
Length = 269
Score = 37.9 bits (89), Expect = 7e-04
Identities = 13/55 (23%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVL-ISRTLQKLNDTANEIKGLTNDSHVFKS 55
+VTG++ GIG+A A+ELA + + + + ++ I ++ K+
Sbjct: 31 ALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKA 85
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain
dehydrogenase/reductase, 4-pyridoxola NAD+,
oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium
loti} PDB: 3ndr_A* 3nug_A*
Length = 247
Score = 37.9 bits (89), Expect = 8e-04
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
VTG+ GIGKA A LA +++ + A I
Sbjct: 11 VTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGK 52
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide
catalysis, enantioselectivity, lyase; HET: RNO; 1.70A
{Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A
1px0_A* 1pwx_A* 1zo8_A*
Length = 254
Score = 37.9 bits (89), Expect = 8e-04
Identities = 6/43 (13%), Positives = 14/43 (32%), Gaps = 4/43 (9%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGL 46
VT G A+ L++ + + +E++
Sbjct: 6 VTNVKHFGGMGSALRLSEAGHTVACHDES----FKQKDELEAF 44
Score = 26.8 bits (60), Expect = 4.2
Identities = 9/42 (21%), Positives = 19/42 (45%)
Query: 59 VNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSK 100
Y+ +A N L++E+ +NI + P+ + + S
Sbjct: 143 STYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSP 184
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold,
oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB:
3afm_A*
Length = 258
Score = 37.5 bits (88), Expect = 9e-04
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQ-KLNDTANEIKGL 46
V++TGS+ GIG A A A+ + L R +++T ++
Sbjct: 10 VLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD 55
>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2,
beta-oxidation, peroxisome, SDR, steroid biosynthesis,
oxidoreductase, NADP; HET: NAI; 2.38A {Rattus
norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*
Length = 319
Score = 37.3 bits (87), Expect = 0.001
Identities = 11/21 (52%), Positives = 17/21 (80%)
Query: 2 VMVTGSTDGIGKAYAIELAKR 22
V+VTG+ G+G+AYA+ A+R
Sbjct: 12 VLVTGAGGGLGRAYALAFAER 32
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain
oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE
MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Length = 248
Score = 37.1 bits (87), Expect = 0.001
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
+VTGST GIG+A A +LA +++ + ++ A EI
Sbjct: 10 SLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIA 52
>3qlj_A Short chain dehydrogenase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Length = 322
Score = 37.4 bits (87), Expect = 0.002
Identities = 10/21 (47%), Positives = 15/21 (71%)
Query: 2 VMVTGSTDGIGKAYAIELAKR 22
V+VTG+ GIG+A+A+ A
Sbjct: 30 VIVTGAGGGIGRAHALAFAAE 50
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A
non-pathogenic dehydrogenase, structural genomics;
1.95A {Mycobacterium smegmatis}
Length = 266
Score = 37.1 bits (87), Expect = 0.002
Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Query: 2 VMVTG-STDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
V+VT + GIG A D+V+ ++L +T +++
Sbjct: 25 VLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLA 68
Score = 25.6 bits (57), Expect = 9.4
Identities = 8/40 (20%), Positives = 14/40 (35%)
Query: 59 VNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNM 98
+Y+ KA V C E ++ + PS+
Sbjct: 172 SHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKF 211
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid,
SBRI, UW, emerald biostructures, structu genomics;
2.50A {Mycobacterium thermoresistibile}
Length = 285
Score = 36.9 bits (86), Expect = 0.002
Identities = 11/50 (22%), Positives = 25/50 (50%), Gaps = 7/50 (14%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQK-------LNDTANEIK 44
+ ++G + GIG A A +A ++ L++++ + + A EI+
Sbjct: 12 MFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIE 61
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold,
oxidoreductase; 1.70A {Clostridium thermocellum atcc
27405} PDB: 3dij_A* 3ged_A 3geg_A*
Length = 247
Score = 36.7 bits (86), Expect = 0.002
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEI 43
V+VTG GIGK ++ + + I ++ D A E
Sbjct: 5 VIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKER 46
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Length = 281
Score = 36.9 bits (86), Expect = 0.002
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTL-QKLNDTANEIKGLT 47
++TGST GIG A A LAK ++VL ++ +E+ GL+
Sbjct: 28 AVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLS 74
>3gem_A Short chain dehydrogenase; structural genomics, APC65077,
oxidoreductase, PSI-2, protein structure initiative;
1.83A {Pseudomonas syringae PV}
Length = 260
Score = 36.8 bits (86), Expect = 0.002
Identities = 8/45 (17%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGL 46
+++TG++ +G A+ L + +++ RT + E++
Sbjct: 30 ILITGASQRVGLHCALRLLEHGHRVIISYRTEH---ASVTELRQA 71
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol
metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP:
c.2.1.2
Length = 265
Score = 36.8 bits (86), Expect = 0.002
Identities = 10/42 (23%), Positives = 21/42 (50%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEI 43
++VTG GIG A+ +A ++ +I R+ + ++
Sbjct: 17 IIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKV 58
Score = 29.1 bits (66), Expect = 0.78
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 59 VNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSK 100
V Y+ +KA + V L E + I+ L P V+T+ +
Sbjct: 170 VFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTA 211
>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation,
peroxisome, SDR, oxido; 2.22A {Candida tropicalis}
Length = 604
Score = 37.0 bits (86), Expect = 0.002
Identities = 10/21 (47%), Positives = 16/21 (76%)
Query: 2 VMVTGSTDGIGKAYAIELAKR 22
V++TG+ G+GK Y++E AK
Sbjct: 11 VIITGAGGGLGKYYSLEFAKL 31
Score = 31.6 bits (72), Expect = 0.14
Identities = 10/22 (45%), Positives = 15/22 (68%)
Query: 1 MVMVTGSTDGIGKAYAIELAKR 22
+V++TG+ G+GK YA AK
Sbjct: 324 VVLITGAGAGLGKEYAKWFAKY 345
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase,
oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei
brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A*
3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A*
3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A*
3jq6_A* ...
Length = 288
Score = 36.5 bits (85), Expect = 0.002
Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRT-LQKLNDTANEI 43
+VTG+ IG+A A++L + +V+ + A+E+
Sbjct: 26 AVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADEL 68
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain
dehydrogenase, ketone BODY, beta hydroxybutyrate,
oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi}
SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A*
2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Length = 260
Score = 36.4 bits (85), Expect = 0.002
Identities = 14/27 (51%), Positives = 17/27 (62%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVL 28
+VTGST GIG A LA + D+VL
Sbjct: 7 AVVTGSTSGIGLGIATALAAQGADIVL 33
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd;
NAD(P)-binding, structural genomics, PSI-biology; HET:
MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Length = 259
Score = 36.3 bits (85), Expect = 0.002
Identities = 11/44 (25%), Positives = 21/44 (47%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
++TGS GIG+A+A + + + +++ A EI
Sbjct: 11 ALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGP 54
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein
structure initiative, PSI-biology; 2.50A {Sinorhizobium
meliloti}
Length = 280
Score = 36.4 bits (85), Expect = 0.003
Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLI-SRTLQKLNDTANEIKGL 46
VTG GIG A LA D+ + + + E+ GL
Sbjct: 34 VTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL 77
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415;
rossmann fold, hot-DOG fold, hydratase 2 motif,
peroxisomes, oxidoreductase; 2.15A {Drosophila
melanogaster}
Length = 613
Score = 36.7 bits (85), Expect = 0.003
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 2 VMVTGSTDGIGKAYAIELAKR 22
+VTG+ G+G+ YA+ A+R
Sbjct: 22 AVVTGAGAGLGREYALLFAER 42
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD
binding; 2.30A {Thermoplasma volcanium}
Length = 269
Score = 36.4 bits (85), Expect = 0.003
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIK 44
+VTG + GIG A L + +V +S + + ++ K
Sbjct: 17 AIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDVNVSDHFK 59
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics,
PSI-2, dehydrogenase, protein structure initiative;
2.30A {Oenococcus oeni psu-1}
Length = 262
Score = 36.0 bits (84), Expect = 0.004
Identities = 9/44 (20%), Positives = 18/44 (40%), Gaps = 3/44 (6%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVL---ISRTLQKLNDTANEIK 44
+ G +G A A ++LVL ++ N +E++
Sbjct: 16 IAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELE 59
Score = 32.1 bits (74), Expect = 0.077
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNM 98
++ Y+G KA V H+ ++E+ I + P +DT+
Sbjct: 156 GFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSF 198
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural
genomics center for infectious disease, S brucellosis;
2.20A {Brucella melitensis biovar abortus}
Length = 261
Score = 35.6 bits (83), Expect = 0.004
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
++TG+ G G+ A AK +V++ R A EI
Sbjct: 12 ALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGD 55
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein
structure initiative, NEW YORK structural genomix
research consortium; 1.69A {Xanthomonas campestris PV}
Length = 274
Score = 35.7 bits (83), Expect = 0.005
Identities = 9/48 (18%), Positives = 23/48 (47%), Gaps = 7/48 (14%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQ-------KLNDTANEIK 44
+TG++ GIG A A+ A+ ++ + +++ ++ A +
Sbjct: 11 ITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVN 58
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET:
NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Length = 255
Score = 35.2 bits (82), Expect = 0.006
Identities = 13/25 (52%), Positives = 16/25 (64%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVL 28
VTGST GIG A LA+ ++VL
Sbjct: 9 VTGSTSGIGLGIAQVLARAGANIVL 33
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase,
oxidoreductase, structural genomics; HET: P4C; 2.25A
{Burkholderia pseudomallei 1710B}
Length = 256
Score = 35.2 bits (82), Expect = 0.007
Identities = 12/52 (23%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLI-SRTLQKLNDTANEIKGLTNDSHVFK 54
VTG GIG + L K +V + + K L D + +
Sbjct: 18 VTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASE 69
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics,
3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus
thuringiensis serovar kurstakorganism_taxid}
Length = 264
Score = 35.2 bits (82), Expect = 0.007
Identities = 7/55 (12%), Positives = 18/55 (32%), Gaps = 1/55 (1%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLI-SRTLQKLNDTANEIKGLTNDSHVFKS 55
++T T G+GK +L + + + + K + ++
Sbjct: 10 ALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQA 64
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus
SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Length = 249
Score = 34.8 bits (81), Expect = 0.008
Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 2/43 (4%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGL 46
+TG +GIG+A A A D+ + + I+ L
Sbjct: 12 ITGGANGIGRAIAERFAVEGADIAIADLV--PAPEAEAAIRNL 52
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase,
oxidoreductase, structural genomics; 2.10A
{Burkholderia pseudomallei 1710B}
Length = 269
Score = 34.8 bits (81), Expect = 0.008
Identities = 10/53 (18%), Positives = 18/53 (33%), Gaps = 1/53 (1%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLI-SRTLQKLNDTANEIKGLTNDSHVFKS 55
VTG G+G A + L M + + S ++ + D +
Sbjct: 30 VTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAV 82
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET:
NAD KPC; 1.8A {Xanthobacter autotrophicus}
Length = 250
Score = 34.8 bits (81), Expect = 0.009
Identities = 12/52 (23%), Positives = 21/52 (40%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDSHVF 53
+VTG++ G G A A R + + + + L +TA D +
Sbjct: 5 AIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLR 56
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology,
NEW structural genomics research consortium, nysgrc;
HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB:
3vc7_A
Length = 255
Score = 34.4 bits (80), Expect = 0.011
Identities = 13/52 (25%), Positives = 19/52 (36%), Gaps = 9/52 (17%)
Query: 1 MVM---------VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEI 43
MVM V G T G+G A L + +++L R + E
Sbjct: 1 MVMGNYQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF 52
Score = 31.7 bits (73), Expect = 0.096
Identities = 12/59 (20%), Positives = 20/59 (33%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKGDHFMRKMHDWLRA 114
P YS +KA + F + L E+ I+ + P +DT +
Sbjct: 147 PGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKT 205
>4dqx_A Probable oxidoreductase protein; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.00A {Rhizobium etli}
Length = 277
Score = 34.4 bits (80), Expect = 0.011
Identities = 15/44 (34%), Positives = 19/44 (43%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
+VTG GIG+A A AK +V+ ANEI
Sbjct: 30 CIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGS 73
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase,
PSI-2, P structure initiative; 2.30A {Agrobacterium
tumefaciens str}
Length = 259
Score = 34.4 bits (80), Expect = 0.013
Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLI-SRTLQKLNDTANEIK 44
++V G+ IG+A AI A+ ++VL + + EI+
Sbjct: 11 IVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIE 54
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas;
oxidoreductase; 1.99A {Streptomyces coelicolor}
Length = 253
Score = 34.1 bits (79), Expect = 0.013
Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 4/48 (8%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTND 49
V+VTG GIG A A A + + R+ + + D
Sbjct: 24 VLVTGGNRGIGLAIARAFADAGDKVAITYRS----GEPPEGFLAVKCD 67
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW
YORK structural genomi research consortium, nysgrc;
2.45A {Sinorhizobium meliloti}
Length = 260
Score = 34.1 bits (79), Expect = 0.015
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQK 35
V++TG++ GIG R +V SR+++
Sbjct: 31 VVITGASQGIGAGLVRAYRDRNYRVVATSRSIKP 64
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl
reductase, oxidoreductase; 1.49A {Mycobacterium
tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Length = 247
Score = 34.1 bits (79), Expect = 0.015
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTND 49
V+VTG GIG A A LA + + R + + G+ D
Sbjct: 18 VLVTGGNRGIGLAIAQRLAADGHKVAVTHRG----SGAPKGLFGVEVD 61
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex,
oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi}
SCOP: c.2.1.2 PDB: 1mxf_A*
Length = 276
Score = 34.1 bits (79), Expect = 0.015
Identities = 8/42 (19%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLI-SRTLQKLNDTANEIK 44
+TG IG + A+ L ++ +V+ + E+
Sbjct: 16 ITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELN 57
>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein
structure initiative, midwest center for structural
genomics, MCSG; 2.06A {Listeria innocua}
Length = 202
Score = 33.8 bits (78), Expect = 0.018
Identities = 8/54 (14%), Positives = 18/54 (33%), Gaps = 1/54 (1%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKGDHFMRKMH 109
+ + V F E+ I+ + P+V++ + K + F
Sbjct: 123 VQGASAAMANGAVTAFAKSAAIEMP-RGIRINTVSPNVLEESWDKLEPFFEGFL 175
Score = 30.3 bits (69), Expect = 0.23
Identities = 6/31 (19%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRT 32
+++ G++ +G A L K+ +++ R
Sbjct: 6 ILLIGASGTLGSAVKERLEKKA-EVITAGRH 35
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain
dehydrogenase/reductase, trypanosomatid, pterin
salvage, drug resistance; HET: NAP FE1; 2.61A
{Leishmania major} SCOP: c.2.1.2
Length = 328
Score = 34.0 bits (78), Expect = 0.019
Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLI-SRTLQKLNDTANEIKGLTNDS 50
+VTG+ +G++ A L + L R+ + N + + +S
Sbjct: 49 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNS 98
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain
dehydrogenase, methotrexate resistance, oxidoreductase;
HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2
PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A*
2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Length = 291
Score = 33.9 bits (78), Expect = 0.020
Identities = 10/50 (20%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLI-SRTLQKLNDTANEIKGLTNDS 50
+VTG+ +G++ A L + L R+ + N + + +S
Sbjct: 12 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNS 61
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural
genomics, NEW YORK structura genomics research
consortium, three layer; 1.76A {Rhizobium etli}
Length = 273
Score = 33.7 bits (78), Expect = 0.021
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
++TG+T GIG A A + + R L+ EI G
Sbjct: 32 AVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGG 75
Score = 29.4 bits (67), Expect = 0.57
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 55 SPYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNM 98
+P F Y+ +KA + F ++ I+ L P +T
Sbjct: 167 TPAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTG 210
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH,
2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural
genomics, structural genomi consortium; HET: NAD GOL;
1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A*
1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Length = 265
Score = 33.4 bits (77), Expect = 0.026
Identities = 10/44 (22%), Positives = 17/44 (38%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
++TG G+G A A L + VL+ A ++
Sbjct: 15 AVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGN 58
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.34A {Sinorhizobium meliloti}
Length = 257
Score = 33.4 bits (77), Expect = 0.029
Identities = 10/44 (22%), Positives = 20/44 (45%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
+VTG++ G+G A LA+ ++ + + A E+
Sbjct: 10 FIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGA 53
Score = 27.2 bits (61), Expect = 3.1
Identities = 11/43 (25%), Positives = 18/43 (41%)
Query: 59 VNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKG 101
Y+ +K V RE++ I+ + P + DT M G
Sbjct: 161 AAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAG 203
>3s55_A Putative short-chain dehydrogenase/reductase; structural
genomics, seattle structural genomics center for
infectious disease, ssgcid; HET: NAD; 2.10A
{Mycobacterium abscessus}
Length = 281
Score = 33.3 bits (77), Expect = 0.030
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 12/57 (21%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISR------------TLQKLNDTANEIKGL 46
++TG G+G+++A+ LA+ D+ + R T L +T ++
Sbjct: 13 ALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT 69
Score = 29.0 bits (66), Expect = 0.73
Identities = 11/65 (16%), Positives = 20/65 (30%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKGDHFMRKMHDWLRAF 115
+Y +K V C ++ + I + P ++T M+ D M L
Sbjct: 166 FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKP 225
Query: 116 AYPTA 120
Sbjct: 226 TLKDV 230
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann
fold, oxidoreductase (AC NADH), NADH binding,
oxidoreductase; HET: NAD; 2.16A {Dictyostelium
discoideum}
Length = 251
Score = 33.0 bits (76), Expect = 0.034
Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Query: 55 SPYFVNYSGTKAFVGHFVNCLTREISH--HNIQTQILIPSVVDTNMSKGDHFMRKMHDW 111
+ + Y TKA H + L E + ++P +DT ++ DW
Sbjct: 152 TSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKYMSDANFDDW 210
Score = 31.9 bits (73), Expect = 0.072
Identities = 5/39 (12%), Positives = 13/39 (33%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTA 40
++V G + +G + + + I D +
Sbjct: 25 ILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNADHS 63
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural
genomics, seattle structural genomics CEN infectious
disease, oxidoreductase; 2.50A {Mycobacterium marinum}
Length = 271
Score = 32.9 bits (76), Expect = 0.037
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
++TG+ GIG + LA+ +VL L A +
Sbjct: 14 AIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGR 57
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase;
protein-NADPH-active site inhibitor complex,
oxidoreductase, chain dehydrogenase; HET: NDP PYQ;
1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Length = 274
Score = 32.6 bits (75), Expect = 0.044
Identities = 10/19 (52%), Positives = 13/19 (68%)
Query: 4 VTGSTDGIGKAYAIELAKR 22
TG+ GIG+ AIEL +R
Sbjct: 26 TTGAGRGIGRGIAIELGRR 44
Score = 28.7 bits (65), Expect = 0.84
Identities = 11/43 (25%), Positives = 17/43 (39%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNM 98
P Y+G+KA V F + + + P V T+M
Sbjct: 165 PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDM 207
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site
inhibitor complex, dinucleotide binding fold,
oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe
grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Length = 283
Score = 32.6 bits (75), Expect = 0.048
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 4 VTGSTDGIGKAYAIELAKR 22
VTG+ GIG+ A+EL +R
Sbjct: 34 VTGAGRGIGREMAMELGRR 52
Score = 28.4 bits (64), Expect = 1.1
Identities = 11/43 (25%), Positives = 21/43 (48%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNM 98
P YSG+K + F C+ +++ I ++ P + T+M
Sbjct: 173 PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDM 215
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain
dehydrogenase/reductase family, lyase; 2.00A
{Arthrobacter SP}
Length = 244
Score = 32.5 bits (75), Expect = 0.051
Identities = 7/44 (15%), Positives = 13/44 (29%), Gaps = 1/44 (2%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLND-TANEIKGL 46
VT + G A L + +V + + E +
Sbjct: 6 VTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENP 49
Score = 27.5 bits (62), Expect = 2.1
Identities = 7/43 (16%), Positives = 13/43 (30%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNM 98
Y Y +A V + +S I + P+ +
Sbjct: 142 AYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPT 184
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid,
structural genomics; 1.95A {Mycobacterium
thermoresistibile}
Length = 317
Score = 32.6 bits (75), Expect = 0.055
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 12/57 (21%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLI------------SRTLQKLNDTANEIKGL 46
+TG+ G G+ +A+ LA+ D+V I + ++L +T ++
Sbjct: 49 AFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ 105
Score = 29.1 bits (66), Expect = 0.81
Identities = 14/57 (24%), Positives = 26/57 (45%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKGDHFMRKMHDWL 112
P +Y+ +K V + L E+ HNI+ + P V+T M+ + ++ L
Sbjct: 203 PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHL 259
>1zk4_A R-specific alcohol dehydrogenase; short chain
reductases/dehydrogenases, magnesium dependence,
oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis}
SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A*
1zk1_A* 1zk2_A 1zk3_A
Length = 251
Score = 32.5 bits (75), Expect = 0.058
Identities = 10/44 (22%), Positives = 18/44 (40%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
++TG T GIG A A + + +++ R A +
Sbjct: 9 AIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT 52
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin,
rossman fold, chorismate metabolism, short-CHA
oxidoreductase, tetramer; 2.00A {Escherichia coli}
Length = 250
Score = 32.1 bits (74), Expect = 0.059
Identities = 9/39 (23%), Positives = 15/39 (38%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTA 40
V VTG+ GIG A A+ + + + +
Sbjct: 10 VWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQEQYPF 48
Score = 28.7 bits (65), Expect = 1.1
Identities = 8/43 (18%), Positives = 19/43 (44%)
Query: 59 VNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKG 101
Y +KA + + E++ ++ ++ P DT+M +
Sbjct: 144 SAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRT 186
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Length = 267
Score = 32.1 bits (74), Expect = 0.059
Identities = 13/42 (30%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLI-SRTLQKLNDTANEIK 44
VTG++ GIG A A LA +V+ + + A +I+
Sbjct: 32 VTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIE 73
Score = 26.7 bits (60), Expect = 3.7
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNM 98
P + Y+ KA V + L++E+ +I + P T++
Sbjct: 170 PSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDL 212
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural
genomics, putative 3-oxoacyl-(acyl carrier protei
reductase, oxidoreductase; HET: NAP MES; 1.87A
{Bacillus anthracis str}
Length = 255
Score = 32.1 bits (74), Expect = 0.070
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVL 28
VTG++ GIG+A A LA + +
Sbjct: 12 VTGASRGIGRAIAKRLANDGALVAI 36
Score = 27.1 bits (61), Expect = 2.8
Identities = 12/50 (24%), Positives = 21/50 (42%)
Query: 52 VFKSPYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKG 101
P F+ YS TK + L +++ I ++P V T+M+
Sbjct: 152 RISLPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAE 201
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain
dehydrogenase/REDU SDR, fungi, oxidoreductase; HET:
GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A*
3qwi_A* 3itd_A
Length = 270
Score = 32.2 bits (74), Expect = 0.072
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 4 VTGSTDGIGKAYAIELAKR 22
VTGS GIG A A+ L +
Sbjct: 23 VTGSGRGIGAAVAVHLGRL 41
Score = 28.3 bits (64), Expect = 1.4
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNM 98
P YSG+K V FV +++ I + P T+M
Sbjct: 162 PKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDM 204
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural
genomics, protein structure initiati
nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Length = 272
Score = 32.1 bits (74), Expect = 0.073
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVL 28
V+VTG + GIG A A++ + +
Sbjct: 29 VLVTGGSRGIGAAVCRLAARQGWRVGV 55
Score = 26.0 bits (58), Expect = 6.7
Identities = 11/43 (25%), Positives = 25/43 (58%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNM 98
+V+Y+ +KA + F L RE++ I+ + P +++T++
Sbjct: 176 TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDL 218
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.85A {Mycobacterium avium}
Length = 280
Score = 31.8 bits (73), Expect = 0.091
Identities = 11/58 (18%), Positives = 25/58 (43%), Gaps = 13/58 (22%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLI-------------SRTLQKLNDTANEIKGL 46
+TG+ G G+++A+ LA D++ + + L++TA ++
Sbjct: 18 AFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ 75
Score = 26.8 bits (60), Expect = 4.2
Identities = 13/53 (24%), Positives = 23/53 (43%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKGDHFMRKM 108
P +YS +K + N L E+ + I+ + P V+T M + + M
Sbjct: 173 PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIF 225
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid,
3-ketoacyl-(acyl-carrier-protein) reductase, mycobac
paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium
subsp}
Length = 278
Score = 31.8 bits (73), Expect = 0.092
Identities = 12/57 (21%), Positives = 25/57 (43%), Gaps = 12/57 (21%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLI------------SRTLQKLNDTANEIKGL 46
+TG+ G G+A+A+ LA D++ + T ++L T ++ +
Sbjct: 16 AFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI 72
Score = 26.4 bits (59), Expect = 4.9
Identities = 12/60 (20%), Positives = 20/60 (33%)
Query: 55 SPYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKGDHFMRKMHDWLRA 114
P V Y K V + ++ I+ + PS V+T M + + A
Sbjct: 169 DPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAA 228
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6;
protein-CO-factor complex, structural genomics,
structural G consortium, SGC, oxidoreductase; HET: NAD;
1.84A {Homo sapiens} SCOP: c.2.1.2
Length = 246
Score = 31.7 bits (73), Expect = 0.094
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLT 47
+++T + GIG+A A+ A+ ++ KL + T
Sbjct: 9 IILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQT 54
>4e4y_A Short chain dehydrogenase family protein; structural genomics,
the center for structural genomics of I diseases,
csgid, niaid; 1.80A {Francisella tularensis subsp}
Length = 244
Score = 31.7 bits (73), Expect = 0.099
Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKL-NDTANEIKG 45
+VTG + GIGKA L + K V+ Q + IK
Sbjct: 7 YLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENLKFIKA 51
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid; HET:
NAD; 1.95A {Mycobacterium avium}
Length = 299
Score = 31.4 bits (72), Expect = 0.14
Identities = 14/57 (24%), Positives = 26/57 (45%), Gaps = 12/57 (21%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLI------------SRTLQKLNDTANEIKGL 46
+TG+ G G+++AI LA+ D++ I T L +T +++ L
Sbjct: 31 AFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL 87
Score = 27.2 bits (61), Expect = 3.5
Identities = 13/53 (24%), Positives = 21/53 (39%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKGDHFMRKM 108
NY +K + + + E+ NI+ I+ PS V T M + R
Sbjct: 186 ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMF 238
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, protein structure initiati nysgrc; 2.30A
{Sinorhizobium meliloti}
Length = 271
Score = 31.4 bits (72), Expect = 0.14
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 4 VTGSTDGIGKAYAIELAK 21
VTG + GIG A A LA
Sbjct: 36 VTGGSRGIGAAIAKRLAL 53
Score = 28.3 bits (64), Expect = 1.4
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKGD 102
P YS +KA + L R++ I I+ P DT+M+ D
Sbjct: 175 PGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPAD 221
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold,
beta-alpha-beta motifs, open twisted sheet, A NADP,
oxidoreductase; 2.30A {Cladosporium herbarum} PDB:
3gdf_A
Length = 267
Score = 31.0 bits (71), Expect = 0.14
Identities = 10/45 (22%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
Query: 2 VMVTGSTD--GIGKAYAIELAKRKMDLVLI-SRTLQKLNDTANEI 43
V+VTG++ G+G A A+ + + + Q + E+
Sbjct: 23 VVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKEL 67
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas
mycobacterium avium, structural genomics; 2.00A
{Mycobacterium avium}
Length = 281
Score = 31.1 bits (71), Expect = 0.15
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEI 43
+V+G G+G+A L + +V+ +K A+E+
Sbjct: 33 AIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL 74
Score = 26.1 bits (58), Expect = 6.0
Identities = 9/43 (20%), Positives = 17/43 (39%)
Query: 59 VNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKG 101
Y+ KA V R++S I+ + P + T + +
Sbjct: 185 TAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMES 227
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann
fold; HET: NAI; 1.80A {Pseudomonas SP}
Length = 255
Score = 31.0 bits (71), Expect = 0.15
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 2 VMVTGSTDGIGKAYAIELAKR 22
+ +TGS GIG A LA+
Sbjct: 4 IAITGSASGIGAALKELLARA 24
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid,
nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp}
Length = 277
Score = 31.0 bits (71), Expect = 0.17
Identities = 10/58 (17%), Positives = 24/58 (41%), Gaps = 13/58 (22%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLI-------------SRTLQKLNDTANEIKGL 46
+TG+ G G+A+A+ +A D++ + + L++T ++
Sbjct: 14 AFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA 71
Score = 28.7 bits (65), Expect = 0.89
Identities = 13/57 (22%), Positives = 23/57 (40%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKGDHFMRKMHDWL 112
P+ ++Y+ +K V E+ H+I+ + P V+T M GD
Sbjct: 169 PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAME 225
>3gvc_A Oxidoreductase, probable short-chain type
dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG,
SBRI, structural genomics; 2.45A {Mycobacterium
tuberculosis}
Length = 277
Score = 31.0 bits (71), Expect = 0.18
Identities = 12/44 (27%), Positives = 18/44 (40%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
+VTG+ GIG A A LA ++ + A +I
Sbjct: 32 AIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGC 75
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Length = 324
Score = 30.9 bits (70), Expect = 0.19
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANE 42
+++TG++ G G+ A LA + R + N + E
Sbjct: 8 ILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVE 48
Score = 30.1 bits (68), Expect = 0.35
Identities = 13/52 (25%), Positives = 20/52 (38%)
Query: 52 VFKSPYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKGDH 103
PY Y KA + RE+S I+T I++P + + H
Sbjct: 151 GGTPPYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAH 202
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold,
structural genomics; HET: NAP F42; 1.65A {Archaeoglobus
fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Length = 212
Score = 30.6 bits (68), Expect = 0.24
Identities = 26/160 (16%), Positives = 50/160 (31%), Gaps = 10/160 (6%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDSHVFKSPYFVNYSG 63
+ G T +GK A+ LA ++V+ SR +K A E + + D+ +
Sbjct: 5 LLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDASI------TGMKN 58
Query: 64 TKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKGDHFMRKMHDWLRAFAYPTATTY 123
A + LT H + L + + + + + + F Y + +
Sbjct: 59 EDAAEACDIAVLTIPWEHAIDTARDLKNILREKIVVS---PLVPVSRGAKGFTYSSERSA 115
Query: 124 ASWAICTLGWCKFATGYWFFDCTVWV-LWTDCDISMFYSS 162
A L K + + L D +
Sbjct: 116 AEIVAEVLESEKVVSALHTIPAARFANLDEKFDWDVPVCG 155
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase,
short chain dehydrogenase/oxidoreductase, SD comamonas
testosteroni; 1.80A {Pandoraea pnomenusa} PDB: 2y99_A*
3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Length = 281
Score = 30.3 bits (69), Expect = 0.27
Identities = 6/42 (14%), Positives = 18/42 (42%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEI 43
++TG G+G+A + ++ ++ ++L +
Sbjct: 8 ALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH 49
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural
genomics, structural genomics CON SGC; 2.40A {Homo
sapiens} SCOP: c.2.1.2
Length = 270
Score = 30.2 bits (69), Expect = 0.31
Identities = 10/44 (22%), Positives = 15/44 (34%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
V+VTG GIG +V+ + E+ G
Sbjct: 12 VVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPG 55
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics,
midwest center for structural genomics, protein
structure initiative; 2.00A {Streptomyces avermitilis}
Length = 281
Score = 30.3 bits (69), Expect = 0.31
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLND 38
VTG++ G G+A A ++ +R + L+D
Sbjct: 10 VTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDD 44
Score = 28.4 bits (64), Expect = 1.1
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTN 97
F YS TKA + L E++ I+ I+ P TN
Sbjct: 146 AGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTN 187
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold,
oxidoreductase; HET: BMA; 1.60A {Thermoplasma
acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Length = 264
Score = 30.2 bits (69), Expect = 0.32
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVL 28
V+VTG++ GIG+A A ++
Sbjct: 11 VIVTGASMGIGRAIAERFVDEGSKVID 37
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short
chain dehydrogenase, SDR, xenobiotic, metyrapone,
oligomerisation; 1.68A {Comamonas testosteroni} SCOP:
c.2.1.2 PDB: 1fk8_A*
Length = 257
Score = 30.0 bits (68), Expect = 0.39
Identities = 6/21 (28%), Positives = 10/21 (47%)
Query: 2 VMVTGSTDGIGKAYAIELAKR 22
++++G GIG A L
Sbjct: 4 IVISGCATGIGAATRKVLEAA 24
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A
{Escherichia coli} PDB: 2zcv_A*
Length = 286
Score = 29.9 bits (68), Expect = 0.40
Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Query: 1 MVMVTGSTDGIGKAYAIELAKR--KMDLVLISRTLQKLNDTA 40
M+ +TG+T +G L K +V I R K A
Sbjct: 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA 42
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus
thermophilus HB8, structural genomics, NPPSFA; HET:
NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Length = 256
Score = 29.8 bits (68), Expect = 0.42
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 2 VMVTGSTDGIGKAYAIELAK 21
V+VTG GIG+A A A+
Sbjct: 9 VLVTGGARGIGRAIAQAFAR 28
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein
structure initiative, southeast collaboratory for
structural genomics; HET: MES; 1.65A {Caenorhabditis
elegans} SCOP: c.2.1.2
Length = 236
Score = 29.6 bits (67), Expect = 0.48
Identities = 9/44 (20%), Positives = 16/44 (36%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
V+V G +G A K ++ I + D+ + G
Sbjct: 6 VIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQADSNILVDG 49
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural
genomics center for infectious disease, ssgcid, NAD,
tuberculosis; HET: NAD; 2.00A {Mycobacterium avium}
Length = 287
Score = 29.5 bits (67), Expect = 0.55
Identities = 14/60 (23%), Positives = 26/60 (43%)
Query: 55 SPYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNMSKGDHFMRKMHDWLRA 114
P YS K V + L +++ +I+ ++ P+ V+T+M R+ L A
Sbjct: 172 GPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEA 231
Score = 28.0 bits (63), Expect = 1.5
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 12/57 (21%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLI------------SRTLQKLNDTANEIKGL 46
V+VTG G G+++A++LA+ D++L T + L + E++
Sbjct: 13 VLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT 69
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 29.6 bits (66), Expect = 0.65
Identities = 6/19 (31%), Positives = 13/19 (68%), Gaps = 2/19 (10%)
Query: 76 TR--EISHHNIQTQILIPS 92
TR +SH +++ +L+P+
Sbjct: 6 TRPLTLSHGSLEHVLLVPT 24
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural
genomics, infectious D center for structural genomics
of infectious diseases; HET: NAD; 2.05A {Bacillus
anthracis str} PDB: 3i3o_A*
Length = 291
Score = 29.0 bits (66), Expect = 0.65
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 4 VTGSTDGIGKAYAIELAK 21
+TG GIG+A +I AK
Sbjct: 52 ITGGDSGIGRAVSIAFAK 69
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase;
HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2
PDB: 2hsd_A*
Length = 254
Score = 29.0 bits (66), Expect = 0.71
Identities = 11/44 (25%), Positives = 19/44 (43%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
V++TG G+G A + +VL ++ TA E+
Sbjct: 8 VIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGD 51
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural
genomics O infectious diseases, 3-layer(ABA) sandwich,
rossmann fold; HET: NAD; 1.25A {Salmonella enterica
subsp}
Length = 294
Score = 29.1 bits (66), Expect = 0.74
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 4 VTGSTDGIGKAYAIELAK 21
VTG GIG+A AI A+
Sbjct: 54 VTGGDSGIGRAAAIAYAR 71
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme,
megasynthase, fatty acid synthesis; 3.2A {Sus scrofa}
PDB: 2vz9_A*
Length = 2512
Score = 29.1 bits (65), Expect = 0.86
Identities = 12/32 (37%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKM-DLVLISRT 32
++TG G G A L R LVL SR+
Sbjct: 1887 YVITGGLGGFGLQLAQWLRLRGAQKLVLTSRS 1918
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
PSI-biology, NEW YORK structural genomi research
consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter
sphaeroides}
Length = 266
Score = 28.7 bits (65), Expect = 0.86
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 2 VMVTGSTDGIGKAYAIELAKR 22
+VTG+ GIG A L
Sbjct: 31 ALVTGAAGGIGGAVVTALRAA 51
Score = 26.4 bits (59), Expect = 5.0
Identities = 11/43 (25%), Positives = 19/43 (44%)
Query: 56 PYFVNYSGTKAFVGHFVNCLTREISHHNIQTQILIPSVVDTNM 98
P Y TKA + C+ + + I+ + P+ V+T M
Sbjct: 161 PGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPM 203
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid,
structural genomics, seattle structural genomics CEN
infectious disease; HET: NAD PG4; 1.55A {Mycobacterium
avium} PDB: 3uwr_A*
Length = 286
Score = 28.7 bits (65), Expect = 0.92
Identities = 15/61 (24%), Positives = 29/61 (47%), Gaps = 16/61 (26%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLI----------------SRTLQKLNDTANEIKG 45
VTG+ G G+++A+ LA+ D++ + + T + L +TA+ +KG
Sbjct: 14 AFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKG 73
Query: 46 L 46
Sbjct: 74 H 74
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty
acid, structural genomi structural genomics/proteomics
initiative, RSGI; HET: ADN; 1.40A {Thermus
thermophilus} SCOP: c.2.1.2
Length = 242
Score = 28.7 bits (65), Expect = 0.94
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLI 29
+VTG G+G+A A+ L R +V++
Sbjct: 5 ALVTGGASGLGRAAALALKARGYRVVVL 32
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle
structural genomics center for infectious DI
oxidoreductase; 1.85A {Mycobacterium ulcerans}
Length = 257
Score = 28.3 bits (64), Expect = 1.3
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLI 29
+VTG G+G A L +V++
Sbjct: 12 AVVTGGASGLGLATTKRLLDAGAQVVVL 39
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent
oxidoreductase (SDR family), structural genomics, PSI;
2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Length = 250
Score = 28.1 bits (63), Expect = 1.3
Identities = 13/39 (33%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLI--SRTLQKLND 38
V+VTG+ GIG +L K K +I +R ++K +
Sbjct: 6 VVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATE 44
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase,
oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora
erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Length = 486
Score = 28.5 bits (64), Expect = 1.5
Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKM-DLVLISRT 32
V+VTG T G+G A LA+R L+L+SR+
Sbjct: 229 VLVTGGTGGVGGQIARWLARRGAPHLLLVSRS 260
>1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones,
alternative binding mode, oxidoreductase; HET: TES;
1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A*
1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A*
3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A*
3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ...
Length = 327
Score = 28.1 bits (63), Expect = 1.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Query: 2 VMVTGSTDGIGKAYAIELAK 21
V++TG + GIG A+ LA
Sbjct: 5 VLITGCSSGIGLHLAVRLAS 24
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A
{Sulfolobus tokodaii}
Length = 472
Score = 27.9 bits (63), Expect = 1.8
Identities = 10/35 (28%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Query: 1 MVMVTGSTDGI-GKAYAIELAKRKMDLVLISRTLQ 34
M+ + GS GI G + + L + + LIS+ +
Sbjct: 1 MIYIIGS--GIAGLSAGVALRRAGKKVTLISKRID 33
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2;
short-chain dehydrogenase/reductase, rossman fold; 1.95A
{Streptomyces fradiae}
Length = 511
Score = 27.9 bits (62), Expect = 1.9
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 1 MVMVTGSTDGIGKAYAIELAKRKM-DLVLISRT 32
V++TG IG+ A LA LVL SR
Sbjct: 261 TVLITGGMGAIGRRLARRLAAEGAERLVLTSRR 293
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or
NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP:
c.2.1.2 PDB: 1dir_A* 1hdr_A*
Length = 241
Score = 27.7 bits (62), Expect = 2.0
Identities = 6/28 (21%), Positives = 9/28 (32%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLI 29
V+V G +G R + I
Sbjct: 10 VLVYGGRGALGSRCVQAFRARNWWVASI 37
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain
dehydrogenase reductase, flavonoi oxidoreductase; HET:
NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Length = 346
Score = 27.7 bits (61), Expect = 2.2
Identities = 23/158 (14%), Positives = 46/158 (29%), Gaps = 20/158 (12%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDS-HVFKSPYFVN 60
V++ G+T IG+ A +++R + A K L + +
Sbjct: 13 VLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQ 72
Query: 61 YSGTKAFVGHFVNCLTREISHHNIQTQI--------------LIPSV--VDTNMSKGDHF 104
+ K H ++ + + +I QI +PS D N +
Sbjct: 73 EAMEKILKEHEIDIVVSTVGGESILDQIALVKAMKAVGTIKRFLPSEFGHDVNRADPVEP 132
Query: 105 MRKMHDWLRAFAYPTATTYASWAICTLGWCKFATGYWF 142
M+ R + + T C + +
Sbjct: 133 GLNMYREKRRVRQLVEESGIPF---TYICCNSIASWPY 167
>3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces
nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A*
Length = 496
Score = 27.8 bits (62), Expect = 2.4
Identities = 16/32 (50%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKM-DLVLISRT 32
V+VTG T GIG A LA++ LVL SR
Sbjct: 242 VLVTGGTGGIGGRVARRLAEQGAAHLVLTSRR 273
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A
{Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A*
2bgm_A*
Length = 278
Score = 27.1 bits (61), Expect = 2.9
Identities = 9/42 (21%), Positives = 14/42 (33%)
Query: 4 VTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
+TG GIG+ A + +V+ N I
Sbjct: 21 ITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS 62
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design,
oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex
aeolicus} PDB: 2hk8_A 2hk7_A
Length = 275
Score = 27.1 bits (61), Expect = 3.2
Identities = 9/40 (22%), Positives = 15/40 (37%)
Query: 10 GIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTND 49
G +A L K + L +RT +K A + +
Sbjct: 139 GASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLEVVN 178
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR,
hydroxysteroid dehydrogenase, structural genomics, PSI;
HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP:
c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Length = 260
Score = 26.7 bits (60), Expect = 4.1
Identities = 7/44 (15%), Positives = 17/44 (38%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
+V+G G+G ++ + +V ++ A E+
Sbjct: 10 ALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELAD 53
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann
fold, short-chain dehydrogenase, oxidoreductase; 1.22A
{Comamonas testosteroni} SCOP: c.2.1.2
Length = 253
Score = 26.7 bits (60), Expect = 4.3
Identities = 8/44 (18%), Positives = 12/44 (27%)
Query: 2 VMVTGSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKG 45
+VTG G+G L + A E+
Sbjct: 9 ALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGE 52
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest
center for structu genomics, MCSG, unknown function;
HET: MNB; 2.30A {Shigella flexneri 2A}
Length = 236
Score = 26.7 bits (59), Expect = 4.5
Identities = 8/42 (19%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 2 VMVTGSTDGIGKAYAIELAKRK-MDLVLISRTLQKLNDTANE 42
V++ G+ I + +LA ++ + L +R K++
Sbjct: 26 VLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPT 67
>3naf_A Calcium-activated potassium channel subunit alpha; ION channel,
gating ring, rossman fold, transport, ION trans; 3.10A
{Homo sapiens}
Length = 798
Score = 26.9 bits (58), Expect = 5.2
Identities = 17/118 (14%), Positives = 38/118 (32%), Gaps = 8/118 (6%)
Query: 27 VLISRTLQKLNDTANEIKGLTNDSHVFKSPYFVNYSGTKAFVGHFVNCLTREISHHNIQT 86
+L S ++ + ++ G+ + +P ++ S H + + NI
Sbjct: 506 ILASLNIKSMQF--DDSIGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQPSITTGVNIP- 562
Query: 87 QILIPSVVDTNMSKGDHFMRKMHDWLRAFAYPTATTYASWAICTLGWCKFATGYWFFD 144
I+ V DTN+ F+ + D +A + +F+
Sbjct: 563 -IITELVNDTNV----QFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFN 615
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate
pathway, dehydrogenase, oxidoreductase; 2.00A
{Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB:
1e5l_A* 1e5q_A
Length = 450
Score = 26.4 bits (57), Expect = 5.5
Identities = 5/38 (13%), Positives = 14/38 (36%)
Query: 10 GIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLT 47
+ + L + + + RTL+ + ++ T
Sbjct: 13 FVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHST 50
>1vi1_A Fatty acid/phospholipid synthesis protein PLSX; structural
genomics, unknown function; HET: MSE; 2.95A {Bacillus
subtilis} SCOP: c.77.1.4
Length = 345
Score = 25.6 bits (57), Expect = 9.3
Identities = 8/46 (17%), Positives = 21/46 (45%)
Query: 6 GSTDGIGKAYAIELAKRKMDLVLISRTLQKLNDTANEIKGLTNDSH 51
GS+D AI A+ + + + +++ + + +G ++ H
Sbjct: 298 GSSDSNAVFRAIRQAREMVSQNVAALIQEEVKEEKTDEEGGSHHHH 343
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.326 0.135 0.454
Gapped
Lambda K H
0.267 0.0850 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,827,205
Number of extensions: 154096
Number of successful extensions: 838
Number of sequences better than 10.0: 1
Number of HSP's gapped: 829
Number of HSP's successfully gapped: 296
Length of query: 181
Length of database: 6,701,793
Length adjustment: 88
Effective length of query: 93
Effective length of database: 4,244,745
Effective search space: 394761285
Effective search space used: 394761285
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 54 (24.4 bits)