BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy164
(161 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 89.7 bits (221), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 8/144 (5%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL +++ + + +EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 62 PEFLTMMA-----RKMKDTDSEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 116
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 117 DEMIREANIDGDGQVNYEEFVQMM 140
Score = 30.0 bits (66), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 32/64 (50%)
Query: 15 KKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
++I +AF +FD GN I E+ V+ LG T+ ++ E+I G + F+
Sbjct: 78 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFV 137
Query: 75 PIVS 78
+++
Sbjct: 138 QMMT 141
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 89.4 bits (220), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 6/137 (4%)
Query: 20 AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVSG 79
AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I FL +++
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAR 74
Query: 80 MISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTA-V 138
+ + S EEL +AFR DKD ++ L +M GE T EE+DEM+ A V
Sbjct: 75 KMKD----TDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 130
Query: 139 DQDTGRIPYEYYINHIM 155
D D G++ YE ++ +M
Sbjct: 131 DGD-GQVNYEEFVQVMM 146
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/137 (37%), Positives = 79/137 (57%), Gaps = 6/137 (4%)
Query: 20 AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVSG 79
AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I FL +++
Sbjct: 12 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMAR 71
Query: 80 MISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTA-V 138
+ + S EEL +AFR DKD ++ L +M GE T EE+DEM+ A V
Sbjct: 72 KMKD----TDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADV 127
Query: 139 DQDTGRIPYEYYINHIM 155
D D G++ YE ++ +M
Sbjct: 128 DGD-GQVNYEEFVQVMM 143
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 89.0 bits (219), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 84/149 (56%), Gaps = 6/149 (4%)
Query: 8 HITNDFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGN 67
+T+D + +AF +FD G+ I +E+GTV+R+LG PTEA++Q++I + G
Sbjct: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 68 IALSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTP 127
I FL +++ + + S EEL +AFR DKD ++ L +M GE T
Sbjct: 64 IDFPEFLNLMARKMKD----TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD 119
Query: 128 EEIDEMMSTA-VDQDTGRIPYEYYINHIM 155
EE+DEM+ A VD D G+I YE ++ +M
Sbjct: 120 EEVDEMIREADVDGD-GQINYEEFVKVMM 147
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 10 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 69
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 70 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 125
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 126 DEMIREADIDGDGQVNYEEFVQMM 149
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 84 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 143
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 144 EFVQMMT 150
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 66 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 121
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 122 DEMIREANIDGDGQVNYEEFVQMM 145
Score = 32.7 bits (73), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I G +
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYE 139
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 140 EFVQMMT 146
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 67 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMM 146
Score = 33.5 bits (75), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 141 EFVQMMT 147
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 67 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMM 146
Score = 33.9 bits (76), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 72 RFLPIVSGMI 81
F+ +++ +
Sbjct: 141 EFVQMMTAKL 150
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 8 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 67
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 68 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 123
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 124 DEMIREADIDGDGQVNYEEFVQMM 147
Score = 33.5 bits (75), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 82 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 141
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 142 EFVQMMT 148
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 67 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMM 146
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 141 EFVQMMT 147
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 62 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 117
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 118 DEMIREADIDGDGQVNYEEFVQMM 141
Score = 33.5 bits (75), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 76 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 135
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 136 EFVQMMT 142
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 64 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 119
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMM 143
Score = 33.5 bits (75), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 78 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 138 EFVQMMT 144
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 5 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 64
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 65 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 120
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 121 DEMIREADIDGDGQVNYEEFVQMM 144
Score = 33.5 bits (75), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 79 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 138
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 139 EFVQMMT 145
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 67 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMM 146
Score = 33.1 bits (74), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 35/68 (51%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 72 RFLPIVSG 79
F+ +++
Sbjct: 141 EFVQMMTA 148
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 66 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 121
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMM 145
Score = 33.5 bits (75), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 140 EFVQMMT 146
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 3 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 62
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 63 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 118
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 119 DEMIREADIDGDGQVNYEEFVQMM 142
Score = 33.5 bits (75), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 77 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 136
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 137 EFVQMMT 143
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 64 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 119
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMM 143
Score = 33.5 bits (75), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 78 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 138 EFVQMMT 144
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 12 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 71
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 72 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 127
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 128 DEMIREADIDGDGQVNYEEFVQMM 151
Score = 33.5 bits (75), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 86 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 145
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 146 EFVQMMT 152
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 66 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 121
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMM 145
Score = 33.5 bits (75), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 140 EFVQMMT 146
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 64 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 119
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 120 DEMIREADIDGDGQVNYEEFVQMM 143
Score = 33.5 bits (75), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 78 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 138 EFVQMMT 144
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 87.8 bits (216), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 79/138 (57%), Gaps = 8/138 (5%)
Query: 20 AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVSG 79
AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I FL +++
Sbjct: 15 AFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMA- 73
Query: 80 MISENRFQPASAEELLK-AFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTA- 137
+ + +EE LK AFR DKD ++ L +M GE T EE+DEM+ A
Sbjct: 74 ----RKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREAD 129
Query: 138 VDQDTGRIPYEYYINHIM 155
VD D G++ YE ++ +M
Sbjct: 130 VDGD-GQVNYEEFVQVMM 146
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 67 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEV 122
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 123 DEMIREADIDGDGQVNYEEFVQMM 146
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYE 140
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 141 EFVQMMT 147
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 66 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEV 121
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMM 145
Score = 33.9 bits (76), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDGQVNYE 139
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 140 EFVQMMT 146
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 65
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 66 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 121
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 122 DEMIREADIDGDGQVNYEEFVQMM 145
Score = 33.5 bits (75), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 80 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 140 EFVQMMT 146
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 79/141 (56%), Gaps = 9/141 (6%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL +++ R S EE+ +AFR DKD ++ L +M GE T EE+
Sbjct: 66 PEFLTMMA------RKMKDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 119
Query: 131 DEMMSTAVDQDTGRIPYEYYI 151
DEM+ A G++ YE ++
Sbjct: 120 DEMIREADIDGDGQVNYEEFV 140
Score = 33.1 bits (74), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 78 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 137
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 138 EFVTMMT 144
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 80/141 (56%), Gaps = 7/141 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL +++ + + S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 367 PEFLTMMARWMKDT----DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 131 DEMMSTAVDQDTGRIPYEYYI 151
DEM+ A G++ YE ++
Sbjct: 423 DEMIREADIDGDGQVNYEEFV 443
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 441 EFVQMMT 447
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 87.0 bits (214), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 67 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 122
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
D+M+ A G++ YE ++ +
Sbjct: 123 DQMIREADIDGDGQVNYEEFVQMM 146
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ ++I + G +
Sbjct: 81 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDGQVNYE 140
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 141 EFVQMMT 147
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 367 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 131 DEMMSTAVDQDTGRIPYEYYI 151
DEM+ A G++ YE ++
Sbjct: 423 DEMIREADIDGDGQVNYEEFV 443
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 441 EFVQMMT 447
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 83/149 (55%), Gaps = 6/149 (4%)
Query: 8 HITNDFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGN 67
+T D + +AF +FD G+ I +E+GTV+R+LG PTEA++Q++I + G
Sbjct: 4 QLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 68 IALSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTP 127
I FL +++ + + S EEL +AFR DKD ++ L +M GE T
Sbjct: 64 IDFPEFLNLMARKMKD----TDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTD 119
Query: 128 EEIDEMMSTA-VDQDTGRIPYEYYINHIM 155
EE+DEM+ A VD D G+I Y+ ++ +M
Sbjct: 120 EEVDEMIREADVDGD-GQINYDEFVKVMM 147
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 86.7 bits (213), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 308 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 367
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 368 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 423
Query: 131 DEMMSTAVDQDTGRIPYEYYI 151
DEM+ A G++ YE ++
Sbjct: 424 DEMIREADIDGDGQVNYEEFV 444
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 382 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 441
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 442 EFVQMMT 448
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 86.7 bits (213), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 367 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 131 DEMMSTAVDQDTGRIPYEYYI 151
DEM+ A G++ YE ++
Sbjct: 423 DEMIREADIDGDGQVNYEEFV 443
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 441 EFVQMMT 447
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 332
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 333 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
Query: 131 DEMMSTAVDQDTGRIPYEYYI 151
DEM+ A G++ YE ++
Sbjct: 389 DEMIREADIDGDGQVNYEEFV 409
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 347 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 406
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 407 EFVQMMT 413
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 332
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 333 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 388
Query: 131 DEMMSTAVDQDTGRIPYEYYI 151
DEM+ A G++ YE ++
Sbjct: 389 DEMIREADIDGDGQVNYEEFV 409
Score = 32.7 bits (73), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 347 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 406
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 407 EFVQMMT 413
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 270 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 329
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 330 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 385
Query: 131 DEMMSTAVDQDTGRIPYEYYI 151
DEM+ A G++ YE ++
Sbjct: 386 DEMIREADIDGDGQVNYEEFV 406
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 344 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 403
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 404 EFVQMMT 410
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 82/145 (56%), Gaps = 9/145 (6%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD ++ L +M GE T EE+
Sbjct: 67 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 122
Query: 131 DEMMSTA-VDQDTGRIPYEYYINHI 154
DEM+ A +D D G++ YE ++ +
Sbjct: 123 DEMIREADIDGD-GQVNYEEFVTMM 146
Score = 33.1 bits (74), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 141 EFVTMMT 147
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 86.7 bits (213), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD ++ L +M GE T EE+
Sbjct: 66 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 121
Query: 131 DEMMSTAVDQDTGRIPYEYYI 151
DEM+ A G++ YE ++
Sbjct: 122 DEMIREADIDGDGQVNYEEFV 142
Score = 33.1 bits (74), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 80 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 140 EFVTMMT 146
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 86.3 bits (212), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 79/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD ++ L +M GE T EE+
Sbjct: 67 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 122
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G++ YE ++ +
Sbjct: 123 DEMIREADIDGDGQVNYEEFVTMM 146
Score = 33.1 bits (74), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 140
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 141 EFVTMMT 147
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 86.3 bits (212), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/141 (36%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD ++ L +M GE T EE+
Sbjct: 66 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 121
Query: 131 DEMMSTAVDQDTGRIPYEYYI 151
DEM+ A G++ YE ++
Sbjct: 122 DEMIREADIDGDGQVNYEEFV 142
Score = 33.1 bits (74), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 80 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 139
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 140 EFVTMMT 146
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 86.3 bits (212), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 366 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 421
Query: 131 DEMMSTAVDQDTGRIPYEYYI 151
DEM+ A G++ YE ++
Sbjct: 422 DEMIREADIDGDGQVNYEEFV 442
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 380 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 440 EFVQMMT 446
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 86.3 bits (212), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 367 PEFLT----MMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 131 DEMMSTAVDQDTGRIPYEYYI 151
DEM+ A G++ YE ++
Sbjct: 423 DEMIREADIDGDGQVNYEEFV 443
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 441 EFVQMMT 447
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 85.9 bits (211), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 366
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 367 PEFLT----MMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 422
Query: 131 DEMMSTAVDQDTGRIPYEYYI 151
DEM+ A G++ YE ++
Sbjct: 423 DEMIREADIDGDGQVNYEEFV 443
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 381 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 440
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 441 EFVQMMT 447
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 85.9 bits (211), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 78/144 (54%), Gaps = 7/144 (4%)
Query: 14 EKKIA---DAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA DAF FD G I RE+GT++R LG PTEA++Q++I EN G +
Sbjct: 6 EEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNF 65
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
+ F I++ + E + EE+ +AF+ D+D ++ L +MI GE T EEI
Sbjct: 66 TEFCGIMAKQMRE----TDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEI 121
Query: 131 DEMMSTAVDQDTGRIPYEYYINHI 154
DEM+ A G I YE ++ I
Sbjct: 122 DEMIREADFDGDGMINYEEFVWMI 145
Score = 30.4 bits (67), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E+++ +AF IFD G+ I E+ V+ LG T+ +I E+I + G I
Sbjct: 80 DTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYE 139
Query: 72 RFLPIVS 78
F+ ++S
Sbjct: 140 EFVWMIS 146
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 85.9 bits (211), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 366 PEFLT----MMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 421
Query: 131 DEMMSTAVDQDTGRIPYEYYI 151
DEM+ A G++ YE ++
Sbjct: 422 DEMIREADIDGDGQVNYEEFV 442
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 380 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 440 EFVQMMT 446
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 85.9 bits (211), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 366 PEFLT----MMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 421
Query: 131 DEMMSTAVDQDTGRIPYEYYI 151
DEM+ A G++ YE ++
Sbjct: 422 DEMIREADIDGDGQVNYEEFV 442
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 380 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 439
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 440 EFVQMMT 446
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 82/145 (56%), Gaps = 9/145 (6%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD ++ L +M GE T EE+
Sbjct: 67 PEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEV 122
Query: 131 DEMMSTA-VDQDTGRIPYEYYINHI 154
DEM+ + +D D G++ YE ++ +
Sbjct: 123 DEMIRESDIDGD-GQVNYEEFVTMM 146
Score = 33.1 bits (74), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 81 DSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDGQVNYE 140
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 141 EFVTMMT 147
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 78/142 (54%), Gaps = 7/142 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 298 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 357
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL M++ S EE+ +AFR DKD Y+ L +M GE T EE+
Sbjct: 358 PEFLI----MMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEV 413
Query: 131 DEMMSTAVDQDTGRIPYEYYIN 152
DEM+ A G++ YE ++
Sbjct: 414 DEMIREADIDGDGQVNYEEFVQ 435
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 372 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 431
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 432 EFVQMMT 438
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 7/145 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL +++ + E S EEL++AF+ D+D + L +M GE T +E+
Sbjct: 66 PEFLSLMARKMKEQD----SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEV 121
Query: 131 DEMMSTAVDQDTGRIPYEYYINHIM 155
DEM+ A G I YE ++ ++
Sbjct: 122 DEMIREADIDGDGHINYEEFVRMMV 146
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 84.7 bits (208), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 7/145 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL +++ + E S EEL++AF+ D+D + L +M GE T +E+
Sbjct: 66 PEFLSLMARKMKEQD----SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEV 121
Query: 131 DEMMSTAVDQDTGRIPYEYYINHIM 155
DEM+ A G I YE ++ ++
Sbjct: 122 DEMIREADIDGDGHINYEEFVRMMV 146
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 73/133 (54%), Gaps = 4/133 (3%)
Query: 19 DAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVS 78
+AF +FD G+ I RE+GTV+R+LG PTEA++++++ + G + FL
Sbjct: 14 EAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFL---- 69
Query: 79 GMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAV 138
GM++ + EE+ +AFR DKD ++ L +M GE + EE+DEM+ A
Sbjct: 70 GMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAAD 129
Query: 139 DQDTGRIPYEYYI 151
G++ YE ++
Sbjct: 130 TDGDGQVNYEEFV 142
Score = 32.3 bits (72), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN + E+ V+ LG ++ ++ E+I + G +
Sbjct: 80 DNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYE 139
Query: 72 RFLPIV 77
F+ ++
Sbjct: 140 EFVRVL 145
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 82.8 bits (203), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 52/150 (34%), Positives = 83/150 (55%), Gaps = 5/150 (3%)
Query: 7 VHITNDFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
V +T + +++I +AFD+FD G+ TID +E+ +RALG P + +I+++I + G
Sbjct: 20 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSG 79
Query: 67 NIALSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFT 126
I FL +++ + E S EE+LKAFR D DN + + L ++ E GE T
Sbjct: 80 TIDFEEFLTMMTAKMGER----DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLT 135
Query: 127 PEEIDEMMSTAVDQDTGRIPYEYYINHIMK 156
EE+ EM++ A D I + +I IMK
Sbjct: 136 EEELQEMIAEADRNDDNEIDEDEFI-RIMK 164
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 82.4 bits (202), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 76/141 (53%), Gaps = 7/141 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ I +++GTV+R+LG PTEA++Q++I G I
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDF 366
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
+FL M++ S EE+ +AFR KD Y+ L +M GE T EE+
Sbjct: 367 PQFLT----MMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEV 422
Query: 131 DEMMSTAVDQDTGRIPYEYYI 151
DEM+ A G++ YE ++
Sbjct: 423 DEMIREAGIDGDGQVNYEQFV 443
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 79.3 bits (194), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 20 AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVSG 79
AFD+FD G I +E+GTV+R LG PT+ ++ II + G I FL ++
Sbjct: 22 AFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 81
Query: 80 MISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVD 139
+ E+ + S EEL + FR D++ Y+D E L ++ GE T EEI+ +M
Sbjct: 82 QMKEDA-KGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDK 140
Query: 140 QDTGRIPYEYYINHI 154
+ GRI ++ ++ +
Sbjct: 141 NNDGRIDFDEFLKMM 155
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 79.3 bits (194), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 1/135 (0%)
Query: 20 AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVSG 79
AFD+FD G I +E+GTV+R LG PT+ ++ II + G I FL ++
Sbjct: 22 AFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 81
Query: 80 MISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVD 139
+ E+ + S EEL + FR D++ Y+D E L ++ GE T EEI+ +M
Sbjct: 82 QMKEDA-KGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDK 140
Query: 140 QDTGRIPYEYYINHI 154
+ GRI ++ ++ +
Sbjct: 141 NNDGRIDFDEFLKMM 155
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 79.0 bits (193), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 77/145 (53%), Gaps = 7/145 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++I D AF +FD G+ I E+ TV+R+L PTE ++Q++I + G I
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL +++ + + + EEL +AF+ DKD Y+ L +MI GE T EE+
Sbjct: 66 DEFLSLMAKKVKDTD----AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEV 121
Query: 131 DEMMSTAVDQDTGRIPYEYYINHIM 155
++M+ A G++ YE ++ +M
Sbjct: 122 EQMIKEADLDGDGQVNYEEFVKMMM 146
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 34/66 (51%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E+++ +AF +FD N I E+ V+ LG T+ +++++I + G +
Sbjct: 80 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 139
Query: 72 RFLPIV 77
F+ ++
Sbjct: 140 EFVKMM 145
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 7/141 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV R+LG PTEA++Q+ I + G I
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDF 65
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL + + S EE+ +AFR DKD Y+ L + GE T EE+
Sbjct: 66 PEFLTXXARKXKD----TDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEV 121
Query: 131 DEMMSTAVDQDTGRIPYEYYI 151
DE + A G++ YE ++
Sbjct: 122 DEXIREADIDGDGQVNYEEFV 142
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 77.0 bits (188), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 79/149 (53%), Gaps = 5/149 (3%)
Query: 9 ITNDFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNI 68
+T + +++I +AFD+FD G+ TID +E+ +RALG P + +I+++I + G I
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 69 ALSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPE 128
FL +++ + E S EE++KAFR D D + + L ++ E GE T E
Sbjct: 62 DFEEFLQMMTAKMGER----DSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDE 117
Query: 129 EIDEMMSTAVDQDTGRIPYEYYINHIMKS 157
E+ EM+ A G + E + IMK
Sbjct: 118 ELQEMIDEADRDGDGEVNEEEFF-RIMKK 145
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
Query: 20 AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVSG 79
AFD+FD G I +E+GTV+R LG PT+ ++ II + G I FL ++
Sbjct: 22 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 81
Query: 80 MISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVD 139
+ E+ + S EEL FR DK+ ++D E L +++ GE T E+I+++M +
Sbjct: 82 QMKEDA-KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDK 140
Query: 140 QDTGRIPYEYYINHI 154
+ GRI ++ ++ +
Sbjct: 141 NNDGRIDFDEFLKMM 155
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 14 EKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRF 73
E+++A+ F IFD + ID E+G +LRA G TE DI++++ + G I F
Sbjct: 92 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 151
Query: 74 LPIVSGM 80
L ++ G+
Sbjct: 152 LKMMEGV 158
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
Query: 20 AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVSG 79
AFD+FD G I +E+GTV+R LG PT+ ++ II + G I FL ++
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 80 MISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVD 139
+ E+ + S EEL FR DK+ ++D E L +++ GE T E+I+++M +
Sbjct: 85 QMKEDA-KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDK 143
Query: 140 QDTGRIPYEYYINHI 154
+ GRI ++ ++ +
Sbjct: 144 NNDGRIDFDEFLKMM 158
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 14 EKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRF 73
E+++A+ F IFD + ID E+G +LRA G TE DI++++ + G I F
Sbjct: 95 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 154
Query: 74 LPIVSGM 80
L ++ G+
Sbjct: 155 LKMMEGV 161
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 76.6 bits (187), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 7/141 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV R+LG PTEA++Q+ I + G I
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINF 65
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL + + S EE+ +AFR DKD Y+ L + GE T EE+
Sbjct: 66 PEFLTXXARCXKD----TDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEV 121
Query: 131 DEMMSTAVDQDTGRIPYEYYI 151
DE + A G++ YE ++
Sbjct: 122 DEXIREADIDGDGQVNYEEFV 142
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 76.3 bits (186), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
Query: 20 AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVSG 79
AFD+FD G I +E+GTV+R LG PT+ ++ II + G I FL ++
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 80 MISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVD 139
+ E+ + S EEL FR DK+ ++D E L +++ GE T E+I+++M +
Sbjct: 85 QMKEDA-KGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDK 143
Query: 140 QDTGRIPYEYYINHI 154
+ GRI ++ ++ +
Sbjct: 144 NNDGRIDFDEFLKMM 158
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 14 EKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRF 73
E+++AD F IFD + ID E+G +LRA G TE DI++++ + G I F
Sbjct: 95 EEELADCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 154
Query: 74 LPIVSGM 80
L ++ G+
Sbjct: 155 LKMMEGV 161
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 76.3 bits (186), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 73/141 (51%), Gaps = 7/141 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV R+LG PTEA++Q+ I + G I
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDF 66
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
FL + + S EE+ +AFR DKD Y+ L + GE T EE+
Sbjct: 67 PEFLTXXARKXKD----TDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEV 122
Query: 131 DEMMSTAVDQDTGRIPYEYYI 151
D+ + A G++ YE ++
Sbjct: 123 DQXIREADIDGDGQVNYEEFV 143
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 75.5 bits (184), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 73/135 (54%), Gaps = 1/135 (0%)
Query: 20 AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVSG 79
AFD+FD G I +E+GTV+R LG PT+ ++ II + G I FL ++
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 80 MISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVD 139
+ E+ + S EEL FR DK+ ++D E L +++ GE T E+I+++M +
Sbjct: 85 QMKEDA-KGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDK 143
Query: 140 QDTGRIPYEYYINHI 154
+ GRI ++ ++ +
Sbjct: 144 NNDGRIDFDEFLKMM 158
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%)
Query: 14 EKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRF 73
E+++ D F IFD + ID E+G +LRA G TE DI++++ + G I F
Sbjct: 95 EEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEF 154
Query: 74 LPIVSGM 80
L ++ G+
Sbjct: 155 LKMMEGV 161
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 72/135 (53%), Gaps = 1/135 (0%)
Query: 20 AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVSG 79
AFD+FD G I +E+GTV+R LG PT+ ++ II + G I FL ++
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 80 MISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVD 139
+ E+ + S EEL FR DK+ ++D E L +++ GE E+I+++M +
Sbjct: 85 QMKEDA-KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDK 143
Query: 140 QDTGRIPYEYYINHI 154
+ GRI ++ ++ +
Sbjct: 144 NNDGRIDFDEFLKMM 158
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 14 EKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRF 73
E+++A+ F IFD + ID E+G +LRA G E DI++++ + G I F
Sbjct: 95 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 154
Query: 74 LPIVSGM 80
L ++ G+
Sbjct: 155 LKMMEGV 161
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 74.3 bits (181), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 79/148 (53%), Gaps = 5/148 (3%)
Query: 10 TNDFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIA 69
T + +++I +AFD+FD G TID +E+ +RALG P + +I+++I + G +
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 70 LSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEE 129
FL +++ +SE + EE+LKAF+ D D + + L ++ E GE T EE
Sbjct: 61 FGDFLTVMTQKMSE----KDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEE 116
Query: 130 IDEMMSTAVDQDTGRIPYEYYINHIMKS 157
+ EM+ A G + + ++ IMK
Sbjct: 117 LQEMIDEADRDGDGEVSEQEFL-RIMKK 143
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 69.7 bits (169), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
Query: 8 HITNDFEKKIADAFDIFD-HAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
+T + + + AFDIF A + +I +E+G V+R LG PT ++QE+I + G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 67 NIALSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFT 126
+ FL ++ + ++ + S EEL FR DK+ Y+D E L ++ GE T
Sbjct: 71 TVDFDEFLVMMVRSMKDDS-KGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETIT 129
Query: 127 PEEIDEMMSTAVDQDTGRIPYEYYINHI 154
++I+E+M + GRI Y+ ++ +
Sbjct: 130 EDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 68.9 bits (167), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Query: 20 AFDIFD-HAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVS 78
AFDIF A + +I +E+G V+R LG PT ++QE+I + G + FL ++
Sbjct: 23 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
Query: 79 GMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAV 138
+ ++ + S EEL FR DK+ Y+D + L ++ GE T ++I+E+M
Sbjct: 83 RSMKDDS-KGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGD 141
Query: 139 DQDTGRIPYEYYINHI 154
+ GRI Y+ ++ +
Sbjct: 142 KNNDGRIDYDEWLEFM 157
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 2/148 (1%)
Query: 8 HITNDFEKKIADAFDIFD-HAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
+T + + + AFDIF A + +I +E+G V+R LG PT ++QE+I + G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 67 NIALSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFT 126
+ FL ++ + ++ + + EEL FR DK+ Y+D E L ++ GE T
Sbjct: 71 TVDFDEFLVMMVRSMKDDS-KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETIT 129
Query: 127 PEEIDEMMSTAVDQDTGRIPYEYYINHI 154
++I+E+M + GRI Y+ ++ +
Sbjct: 130 EDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Query: 20 AFDIFD-HAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVS 78
AFDIF A + +I +E+G V+R LG PT ++QE+I + G + FL ++
Sbjct: 23 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
Query: 79 GMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAV 138
+ ++ + S EEL FR DK+ Y+D + L ++ GE T ++I+E+M
Sbjct: 83 RSMKDDS-KGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGD 141
Query: 139 DQDTGRIPYEYYINHI 154
+ GRI Y+ ++ +
Sbjct: 142 KNNDGRIDYDEFLEFM 157
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 2/136 (1%)
Query: 20 AFDIFD-HAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVS 78
AFDIF A + +I +E+G V+R LG PT ++QE+I + G + FL ++
Sbjct: 23 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
Query: 79 GMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAV 138
+ ++ + S EEL FR DK+ Y+D + L ++ GE T ++I+E+M
Sbjct: 83 RSMKDDS-KGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGD 141
Query: 139 DQDTGRIPYEYYINHI 154
+ GRI Y+ ++ +
Sbjct: 142 KNNDGRIDYDEFLEFM 157
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 81/151 (53%), Gaps = 5/151 (3%)
Query: 7 VHITNDFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
+ D ++ +AF++FD G+ I + G V+RALG PT A++ +++ ++ E
Sbjct: 2 IEFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELK 61
Query: 67 N--IALSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEP 124
+ + FLP++ +++NR Q + E+ L+ FR DK+ + L ++ GE
Sbjct: 62 SRRVDFETFLPMLQA-VAKNRGQ-GTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEK 119
Query: 125 FTPEEIDEMMSTAVDQDTGRIPYEYYINHIM 155
T EE++ +++ D + G I YE ++ HI+
Sbjct: 120 MTEEEVETVLAGHEDSN-GCINYEAFLKHIL 149
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 67.4 bits (163), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 8/144 (5%)
Query: 10 TNDFEKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
+N E++IA+ AF +FD N +I E+ TV+R+LG P+EA++ +++ +
Sbjct: 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNH 61
Query: 67 NIALSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFT 126
I S FL ++S + N S +ELL+AF+ DK+ + L ++ GE T
Sbjct: 62 QIEFSEFLALMSRQLKSND----SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLT 117
Query: 127 PEEIDEMMSTAVDQDTGRIPYEYY 150
E+D+M+ D +G I + +
Sbjct: 118 DAEVDDMLREVSD-GSGEINIQQF 140
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 76/148 (51%), Gaps = 2/148 (1%)
Query: 8 HITNDFEKKIADAFDIFD-HAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
+T + + + AFDIF A + I +E+G V+R LG PT ++QE+I + G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 67 NIALSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFT 126
+ FL ++ + ++ + + EEL FR DK+ Y+D E L ++ GE T
Sbjct: 71 TVDFDEFLVMMVRCMKDDS-KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETIT 129
Query: 127 PEEIDEMMSTAVDQDTGRIPYEYYINHI 154
++I+E+M + GRI Y+ ++ +
Sbjct: 130 EDDIEELMKDGDKNNDGRIDYDEFLEFM 157
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 67.0 bits (162), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 75/144 (52%), Gaps = 8/144 (5%)
Query: 10 TNDFEKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
+N E++IA+ AF +FD N +I E+ TV+R+LG P+EA++ +++ +
Sbjct: 3 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNH 62
Query: 67 NIALSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFT 126
I S FL ++S + N S +ELL+AF+ DK+ + L ++ GE T
Sbjct: 63 QIEFSEFLALMSRQLKSND----SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLT 118
Query: 127 PEEIDEMMSTAVDQDTGRIPYEYY 150
E+D+M+ D +G I + +
Sbjct: 119 DAEVDDMLREVSD-GSGEINIQQF 141
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 67.0 bits (162), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 2/130 (1%)
Query: 20 AFDIFD-HAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVS 78
AFDIF A + +I +E+G V+R LG PT ++QE+I + G + FL ++
Sbjct: 23 AFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV 82
Query: 79 GMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAV 138
+ ++ + S EEL FR DK+ Y+D + L ++ GE T ++I+E+M
Sbjct: 83 RSMKDDS-KGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGD 141
Query: 139 DQDTGRIPYE 148
+ GRI Y+
Sbjct: 142 KNNDGRIDYD 151
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 35/67 (52%)
Query: 14 EKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRF 73
E++++D F +FD + ID E+ +L+A G TE DI+E++ + G I
Sbjct: 94 EEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEX 153
Query: 74 LPIVSGM 80
L + G+
Sbjct: 154 LEFMKGV 160
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 63.5 bits (153), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 69/140 (49%), Gaps = 6/140 (4%)
Query: 16 KIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLP 75
+I + F IFD + + E+G+ LR+LG PT A++ I EF L+ F
Sbjct: 6 QIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFD---LATFKT 62
Query: 76 IVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMS 135
+ I Q ++E+L AFR LDK+ + + L +L++ G+ T E++E+M
Sbjct: 63 VYRKPIKTPTEQ---SKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMK 119
Query: 136 TAVDQDTGRIPYEYYINHIM 155
G I YE +++ ++
Sbjct: 120 EVSVSGDGAINYESFVDMLV 139
Score = 30.4 bits (67), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 25/43 (58%)
Query: 15 KKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEII 57
K++ DAF D GN TI E+ +L LG T ++++E++
Sbjct: 76 KEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELM 118
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 63.2 bits (152), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 73/140 (52%), Gaps = 8/140 (5%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD + +I E+ TV+R+LG P+EA++ +++ + I
Sbjct: 7 EEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEF 66
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
S FL ++S + N S +ELL+AF+ DK+ + L ++ GE T E+
Sbjct: 67 SEFLALMSRQLKCND----SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEV 122
Query: 131 DEMMSTAVDQDTGRIPYEYY 150
DEM+ D +G I + +
Sbjct: 123 DEMLREVSD-GSGEINIKQF 141
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 11 NDFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
ND E+++ +AF +FD G+ I E+ VL ++G T+A++ E++ + G I +
Sbjct: 80 NDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVSDGS-GEINI 138
Query: 71 SRFLPIVS 78
+F ++S
Sbjct: 139 KQFAALLS 146
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 62.8 bits (151), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 74/150 (49%), Gaps = 9/150 (6%)
Query: 12 DFEKKIAD----AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGN 67
+F K AD AF +FD G+ I +VG + RALG PT A+I +I+ E
Sbjct: 1 EFSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA 60
Query: 68 IALS--RFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPF 125
A++ FLP++ + N + E+ ++ R DK+ + L ++ GE
Sbjct: 61 AAITFEEFLPMLQA--AANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKM 118
Query: 126 TPEEIDEMMSTAVDQDTGRIPYEYYINHIM 155
T EE++E+M D + G I YE ++ HIM
Sbjct: 119 TEEEVEELMKGQEDSN-GCINYEAFVKHIM 147
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 62.8 bits (151), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 9/147 (6%)
Query: 11 NDFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG--NI 68
NDF+ +AF +FD G+ I +VG ++RALG PT A+I +I+ E I
Sbjct: 4 NDFK----EAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKI 59
Query: 69 ALSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPE 128
FLP++ + N + E+ ++ R DK+ + L ++ GE T E
Sbjct: 60 TFEEFLPMLQA--AANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEE 117
Query: 129 EIDEMMSTAVDQDTGRIPYEYYINHIM 155
E++E+M D + G I YE ++ HIM
Sbjct: 118 EVEELMKGQEDSN-GCINYEAFVKHIM 143
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 61.6 bits (148), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 70/139 (50%), Gaps = 5/139 (3%)
Query: 19 DAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS--RFLPI 76
+AF +FD G+ I +VG + RALG PT A+I +I+ E A++ FLP+
Sbjct: 10 EAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPM 69
Query: 77 VSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMST 136
+ + N + E+ ++ R DK+ + L ++ GE T EE++E+M
Sbjct: 70 LQA--AANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG 127
Query: 137 AVDQDTGRIPYEYYINHIM 155
D + G I YE ++ HIM
Sbjct: 128 QEDSN-GCINYEAFVKHIM 145
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 60.1 bits (144), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 7/125 (5%)
Query: 10 TNDFEKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
+N E++IA+ AF +FD N +I E+ TV+R+LG P+EA++ +++ +
Sbjct: 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNH 61
Query: 67 NIALSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFT 126
I S FL ++S + N S +ELL+AF+ DK+ + L ++ GE T
Sbjct: 62 QIEFSEFLALMSRQLKSND----SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLT 117
Query: 127 PEEID 131
E++
Sbjct: 118 DAELE 122
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 57.8 bits (138), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 19 DAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG--NIALSRFLPI 76
+AF +FD G+ I + G V+RALG PT A++ +++ ++ E + +FLP+
Sbjct: 11 EAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQFLPM 70
Query: 77 VSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMST 136
+ I++N+ Q E+ ++ R DK+ + + +++ GE T EE++++++
Sbjct: 71 MQ-TIAKNKDQ-GCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAG 128
Query: 137 AVDQDTGRIPYEYYINHIMKS 157
D + G I YE + ++
Sbjct: 129 HEDSN-GCINYEELVRMVLSG 148
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 9/139 (6%)
Query: 20 AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVSG 79
AF +FD G I +G +LRA G PT A+I EI T + + +FL +++
Sbjct: 10 AFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLP----AEVDMEQFLQVLN- 64
Query: 80 MISENRF-QPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAV 138
N F P EE +K F+ DKD + L ++ GE + EE+DE++
Sbjct: 65 --RPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVP 122
Query: 139 DQDTGRIPYEYYINHIMKS 157
+D G + Y ++ I+ +
Sbjct: 123 VKD-GMVNYHDFVQMILAN 140
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 74/141 (52%), Gaps = 5/141 (3%)
Query: 19 DAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG--NIALSRFLPI 76
+AF +FD G+ I + G V+RALG PT A++ +++ ++ E + +FLP+
Sbjct: 13 EAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLKTLKFEQFLPM 72
Query: 77 VSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMST 136
+ I++N+ Q E+ ++ R DK+ + + +++ GE T EE++++++
Sbjct: 73 MQ-TIAKNKDQ-GCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAG 130
Query: 137 AVDQDTGRIPYEYYINHIMKS 157
D + G I YE + ++
Sbjct: 131 HEDSN-GCINYEELVRMVLSG 150
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 56.2 bits (134), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 7/89 (7%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 71 SRFLPIVSGMISENRFQPASAEELLKAFR 99
FL +++ + + S EE+ +AFR
Sbjct: 66 PEFLTMMARKMKDTD----SEEEIREAFR 90
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 76/155 (49%), Gaps = 4/155 (2%)
Query: 3 LSEEVHITNDFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCEN 62
+S + +T + +++I +AFD+FD G TID +E+ RALG P + +I++ I +
Sbjct: 19 MSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKEEIKKXISEIDK 78
Query: 63 PEFGNIALSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEG 122
G FL + + SE + EE+LKAF+ D D + + L ++ E G
Sbjct: 79 EGTGKXNFGDFLTVXTQKXSE----KDTKEEILKAFKLFDDDETGKISFKNLKRVAKELG 134
Query: 123 EPFTPEEIDEMMSTAVDQDTGRIPYEYYINHIMKS 157
E T EE+ E + A G + + ++ K+
Sbjct: 135 ENLTDEELQEXIDEADRDGDGEVSEQEFLRIXKKT 169
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 55.5 bits (132), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 66/143 (46%), Gaps = 8/143 (5%)
Query: 19 DAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVS 78
D F +FD G I +G LRA+G PT +Q+II + A S L ++
Sbjct: 8 DIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLR---DASSLTLDQIT 64
Query: 79 GMISENRFQ-----PASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEM 133
G+I N + A E+ +KAF+ DK++ + L ++ GE T E+DE+
Sbjct: 65 GLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDEL 124
Query: 134 MSTAVDQDTGRIPYEYYINHIMK 156
+ G I Y+ +I +++
Sbjct: 125 LKGVEVDSNGEIDYKKFIEDVLR 147
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 71 SRFLPIVS 78
FL +++
Sbjct: 66 PEFLTMMA 73
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 71 SRFLPIVS 78
FL +++
Sbjct: 66 PEFLTMMA 73
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 71 SRFLPIVS 78
FL +++
Sbjct: 66 PEFLTMMA 73
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 71 SRFLPIVS 78
FL +++
Sbjct: 66 PEFLTMMA 73
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 71 SRFLPIVS 78
FL +++
Sbjct: 66 PEFLTMMA 73
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 65
Query: 71 SRFLPIVS 78
FL +++
Sbjct: 66 PEFLTMMA 73
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 71 SRFLPIVS 78
FL +++
Sbjct: 66 PEFLTMMA 73
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF +FD G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 71 SRFLPIVS 78
FL +++
Sbjct: 67 PEFLTMMA 74
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 74/143 (51%), Gaps = 7/143 (4%)
Query: 15 KKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
K++ + FD +D + +D ++G V R LG P D+ + T + E ++ FL
Sbjct: 13 KEVFELFDFWD-GRDGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKMGE-KSLPFEEFL 70
Query: 75 PIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMM 134
P G++ + + + ++AF+T D++ + ++ L ++ GE + EE+DE++
Sbjct: 71 PAYEGLMD---CEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEII 127
Query: 135 S-TAVDQDT-GRIPYEYYINHIM 155
+ T + +D G + YE ++ +M
Sbjct: 128 NLTDLQEDLEGNVKYEEFVKKVM 150
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 73/143 (51%), Gaps = 8/143 (5%)
Query: 17 IADAFDIFDHAGNK--TIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
+ D F++FD + +D ++G V R LG P D+ + T + E ++ FL
Sbjct: 11 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGE-KSLPFEEFL 69
Query: 75 PIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMM 134
P G++ + + + ++AF+T D++ + ++ L ++ GE + EE+DE++
Sbjct: 70 PAYEGLMD---CEQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEII 126
Query: 135 S-TAVDQDT-GRIPYEYYINHIM 155
+ T + +D G + YE ++ +M
Sbjct: 127 NLTDLQEDLEGNVKYEEFVKKVM 149
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 74/143 (51%), Gaps = 7/143 (4%)
Query: 15 KKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
K++ + FD +D + +D ++G V R LG P D+ + T + E ++ FL
Sbjct: 12 KEVFELFDFWD-GRDGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKMGE-KSLPFEEFL 69
Query: 75 PIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMM 134
P G++ + + + ++AF+T D++ + ++ L ++ GE + EE+DE++
Sbjct: 70 PAYEGLMD---CEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEII 126
Query: 135 S-TAVDQDT-GRIPYEYYINHIM 155
+ T + +D G + YE ++ +M
Sbjct: 127 NLTDLQEDLEGNVKYEEFVKKVM 149
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 77/152 (50%), Gaps = 7/152 (4%)
Query: 8 HITNDFEKKIADAFDIFDHAGNKT--IDCREVGTVLRALGGCPTEADIQEIIVTCENPEF 65
+T D +++ + FD+FD + +D +VG +LR LG PTEA + + T + E
Sbjct: 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTKKMGEK 61
Query: 66 GNIALSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPF 125
L LPI M S++ +A+E ++AF+T D++ + + + ++ GE
Sbjct: 62 A-YKLEEILPIYEEMSSKD--TGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERI 118
Query: 126 TPEEIDEMMSTA-VDQDT-GRIPYEYYINHIM 155
T ++ +++ + + +D G I YE + +M
Sbjct: 119 TEDQCNDIFTFCDIREDIDGNIKYEDLMKKVM 150
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 17 IADAFDIFDHAGNK--TIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
+ D F++FD + +D ++G V R LG P D+ + T + E ++ FL
Sbjct: 8 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGE-KSLPFEEFL 66
Query: 75 PIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMM 134
P G++ + + + ++AF+T D++ + ++ L ++ GE + E++DE++
Sbjct: 67 PAYEGLMD---CEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 123
Query: 135 S-TAVDQDT-GRIPYEYYINHIMKS 157
T + +D G + YE ++ +M
Sbjct: 124 KLTDLQEDLEGNVKYEDFVKKVMAG 148
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 17 IADAFDIFDHAGNK--TIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
+ D F++FD + +D ++G V R LG P D+ + T + E ++ FL
Sbjct: 9 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGE-KSLPFEEFL 67
Query: 75 PIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMM 134
P G++ + + + ++AF+T D++ + ++ L ++ GE + E++DE++
Sbjct: 68 PAYEGLMD---CEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 124
Query: 135 S-TAVDQDT-GRIPYEYYINHIMKS 157
T + +D G + YE ++ +M
Sbjct: 125 KLTDLQEDLEGNVKYEDFVKKVMAG 149
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 17 IADAFDIFDHAGNK--TIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
+ D F++FD + +D ++G V R LG P D+ + T + E ++ FL
Sbjct: 11 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGE-KSLPFEEFL 69
Query: 75 PIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMM 134
P G++ + + + ++AF+T D++ + ++ L ++ GE + E++DE++
Sbjct: 70 PAYEGLMD---CEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 126
Query: 135 S-TAVDQDT-GRIPYEYYINHIM 155
T + +D G + YE ++ +M
Sbjct: 127 KLTDLQEDLEGNVKYEDFVKKVM 149
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 72/145 (49%), Gaps = 8/145 (5%)
Query: 17 IADAFDIFDHAGNK--TIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
+ D F++FD + +D ++G V R LG P D+ + T + E ++ FL
Sbjct: 8 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGE-KSLPFEEFL 66
Query: 75 PIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMM 134
P G++ + + + ++AF+T D++ + ++ L ++ GE + E++DE++
Sbjct: 67 PAYEGLMD---CEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 123
Query: 135 S-TAVDQDT-GRIPYEYYINHIMKS 157
T + +D G + YE ++ +M
Sbjct: 124 KLTDLQEDLEGNVKYEDFVKKVMAG 148
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 72/143 (50%), Gaps = 8/143 (5%)
Query: 17 IADAFDIFDHAGNK--TIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
+ D F++FD + +D ++G V R LG P D+ + T + E ++ FL
Sbjct: 11 LKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGE-KSLPFEEFL 69
Query: 75 PIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMM 134
P G++ + + + ++AF+T D++ + ++ L ++ GE + E++DE++
Sbjct: 70 PAYEGLMD---CEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 126
Query: 135 S-TAVDQDT-GRIPYEYYINHIM 155
T + +D G + YE ++ +M
Sbjct: 127 KLTDLQEDLEGNVKYEDFVKKVM 149
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++IA+ AF ++D G+ TI +E+GTV+R+LG PTEA++Q++I + G I
Sbjct: 6 EEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDF 65
Query: 71 SRFLPIVS 78
FL +++
Sbjct: 66 PEFLTMMA 73
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 44/72 (61%)
Query: 7 VHITNDFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
V +T + +++I +AFD+FD G+ TID +E+ +RALG P + +I+++I + G
Sbjct: 22 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSG 81
Query: 67 NIALSRFLPIVS 78
I FL +++
Sbjct: 82 TIDFEEFLTMMT 93
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 49.7 bits (117), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 47/80 (58%)
Query: 3 LSEEVHITNDFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCEN 62
+S + +T + +++I +AFD+FD G TID +E+ +RALG P + +I+++I +
Sbjct: 19 MSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDK 78
Query: 63 PEFGNIALSRFLPIVSGMIS 82
G + FL +++ +S
Sbjct: 79 EGTGKMNFGDFLTVMTQKMS 98
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 90 SAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTA-VDQDTGRIPYE 148
S EEL +AFR DKD ++ L +M GE T EE+DEM+ A VD D G+I YE
Sbjct: 2 SEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGD-GQINYE 60
Query: 149 YYINHIM 155
++ +M
Sbjct: 61 EFVKVMM 67
Score = 30.8 bits (68), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E+++ +AF +FD N I E+ V+ LG T+ ++ E+I + G I
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 72 RFLPIV 77
F+ ++
Sbjct: 61 EFVKVM 66
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 48.9 bits (115), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 43/71 (60%)
Query: 8 HITNDFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGN 67
+T++ + +AF +FD G+ I +E+GTV+R+LG PTEA++Q++I + G
Sbjct: 3 QLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 68 IALSRFLPIVS 78
I FL +++
Sbjct: 63 IDFPEFLNLMA 73
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
Query: 19 DAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVS 78
+AF++FD I + TVL+ G A E+ + G I FL ++
Sbjct: 10 EAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMG 69
Query: 79 GMISENRFQPASAEELLK-AFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTA 137
R + ++E++L+ AFRT D + Y+ K L ++ G+ P E E +
Sbjct: 70 -----RRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGI- 123
Query: 138 VDQDTGRIPYEYYINHIM 155
+ + G+I Y+ +IN +
Sbjct: 124 TETEKGQIRYDNFINTMF 141
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 90 SAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEY 149
S EE+ +AFR DKD Y+ L +M GE T EE+DEM+ A G++ YE
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 150 YI 151
++
Sbjct: 63 FV 64
Score = 33.9 bits (76), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 62 EFVQMMT 68
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 71/143 (49%), Gaps = 8/143 (5%)
Query: 17 IADAFDIFDHAGNK--TIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
+ D F++F + +D ++G V R LG P D+ + T + E ++ FL
Sbjct: 11 LKDVFELFAFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGE-KSLPFEEFL 69
Query: 75 PIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMM 134
P G++ + + + ++AF+T D++ + ++ L ++ GE + E++DE++
Sbjct: 70 PAYEGLMD---CEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 126
Query: 135 S-TAVDQDT-GRIPYEYYINHIM 155
T + +D G + YE ++ +M
Sbjct: 127 KLTDLQEDLEGNVKYEDFVKKVM 149
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 90 SAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEY 149
S EE+ +AFR DKD Y+ L +M GE T EE+DEM+ A G++ YE
Sbjct: 3 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 62
Query: 150 YI 151
++
Sbjct: 63 FV 64
Score = 33.5 bits (75), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 72 RFLPIV 77
F+ ++
Sbjct: 62 EFVQMM 67
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 90 SAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEY 149
S EE+ +AFR DKD Y+ L +M GE T EE+DEM+ A G++ YE
Sbjct: 4 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 63
Query: 150 YI 151
++
Sbjct: 64 FV 65
Score = 33.9 bits (76), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 3 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 62
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 63 EFVQMMT 69
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 90 SAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEY 149
S EE+ +AFR DKD Y+ L +M GE T EE+DEM+ A G++ YE
Sbjct: 7 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 66
Query: 150 YI 151
++
Sbjct: 67 FV 68
Score = 34.3 bits (77), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 35/68 (51%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 6 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 65
Query: 72 RFLPIVSG 79
F+ +++
Sbjct: 66 EFVQMMTA 73
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 47.4 bits (111), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 90 SAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEY 149
S EE+ +AFR DKD Y+ L +M GE T EE+DEM+ A G++ YE
Sbjct: 6 SEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 65
Query: 150 YI 151
++
Sbjct: 66 FV 67
Score = 34.3 bits (77), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 35/68 (51%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G +
Sbjct: 5 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 64
Query: 72 RFLPIVSG 79
F+ +++
Sbjct: 65 EFVQMMTA 72
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 90 SAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEY 149
S EE+ +AFR DKD Y+ L +M GE T EE+DEM+ A G++ YE
Sbjct: 5 SEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYED 64
Query: 150 YI 151
++
Sbjct: 65 FV 66
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 35/67 (52%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E++I +AF +FD GN I ++ V+ LG T+ ++ E+I + G +
Sbjct: 4 DSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 63
Query: 72 RFLPIVS 78
F+ +++
Sbjct: 64 DFVQMMT 70
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 90 SAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEY 149
+ EEL +AF+ DKD Y+ L +MI GE T EE+++M+ A G++ YE
Sbjct: 2 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 61
Query: 150 YINHIM 155
++ +M
Sbjct: 62 FVKMMM 67
Score = 30.0 bits (66), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 34/66 (51%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E+++ +AF +FD N I E+ V+ LG T+ +++++I + G +
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 72 RFLPIV 77
F+ ++
Sbjct: 61 EFVKMM 66
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 46.6 bits (109), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 90 SAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEY 149
+ EEL +AF+ DKD Y+ L +MI GE T EE+++M+ A G++ YE
Sbjct: 7 AEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEE 66
Query: 150 YINHIM 155
++ +M
Sbjct: 67 FVKMMM 72
Score = 33.1 bits (74), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 17/70 (24%), Positives = 36/70 (51%)
Query: 8 HITNDFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGN 67
H+ D E+++ +AF +FD N I E+ V+ LG T+ +++++I + G
Sbjct: 2 HMDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 68 IALSRFLPIV 77
+ F+ ++
Sbjct: 62 VNYEEFVKMM 71
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 92 EELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEYYI 151
EE+ +AFR DKD Y+ L +M GE T EE+DEM+ A G++ YE ++
Sbjct: 2 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 61
Score = 32.7 bits (73), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 34/65 (52%)
Query: 14 EKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRF 73
E++I +AF +FD GN I E+ V+ LG T+ ++ E+I + G + F
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 74 LPIVS 78
+ +++
Sbjct: 61 VQMMT 65
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 46.2 bits (108), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 9 ITNDFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNI 68
+T + +++ +AF +FD + + E+GTV+RALG PT+ I EI+ + G
Sbjct: 8 LTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKF 67
Query: 69 ALSRFLPIV 77
FL I+
Sbjct: 68 DQETFLTIM 76
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 33/64 (51%)
Query: 92 EELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEYYI 151
+E +AF+ DKDN + L E L +M G T ++I E++ ++G+ E ++
Sbjct: 14 QEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKFDQETFL 73
Query: 152 NHIM 155
++
Sbjct: 74 TIML 77
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 45.8 bits (107), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 63/132 (47%)
Query: 28 GNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVSGMISENRFQ 87
G+ + ++G +L LG T++ I+++I + G+I F I + + E
Sbjct: 27 GSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNP 86
Query: 88 PASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPY 147
+EL +AFR DK+ Y+ + + +++ E E + E++D M+ +G + +
Sbjct: 87 EQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDF 146
Query: 148 EYYINHIMKSEE 159
E ++ + +E
Sbjct: 147 EEFMGVMTGGDE 158
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 90 SAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEY 149
S EE+ +AFR DKD Y+ L +M GE T EE+DEM+ A G++ YE
Sbjct: 27 SEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEE 86
Query: 150 YI 151
++
Sbjct: 87 FV 88
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 20 AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVSG 79
AFD+FD G I +E+GTV+R LG PT+ ++ II + G I FL ++
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 80 MISEN 84
+ E+
Sbjct: 85 QMKED 89
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 35/65 (53%)
Query: 20 AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVSG 79
AFD+FD G I +E+GTV+R LG PT+ ++ II + G I FL ++
Sbjct: 25 AFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLVMMVR 84
Query: 80 MISEN 84
+ E+
Sbjct: 85 QMKED 89
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
Query: 15 KKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
+++ +AF FD + I+CR++G +R +G PTE ++ E+ G++ F+
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 75 PIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLD----KEYLTKLMIEEGEPFTPEEI 130
++ + +EL AFR D + + +E + KL+ G +I
Sbjct: 71 ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLL---GHQVGHRDI 127
Query: 131 DEMMSTAVDQDTGRIPYEYYINHIMK 156
+E++ GR+ +E ++ + +
Sbjct: 128 EEIIRDVDLNGDGRVDFEEFVRMMSR 153
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 86 FQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEID 131
+P EEL +AFR DKD Y++ L M G + P E++
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMG--YMPTEME 48
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/146 (21%), Positives = 66/146 (45%), Gaps = 7/146 (4%)
Query: 15 KKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
+++ +AF FD + I+CR++G +R +G PTE ++ E+ G++ F+
Sbjct: 25 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 84
Query: 75 PIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLD----KEYLTKLMIEEGEPFTPEEI 130
++ + +EL AFR D + + +E + KL+ G +I
Sbjct: 85 ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLL---GHQVGHRDI 141
Query: 131 DEMMSTAVDQDTGRIPYEYYINHIMK 156
+E++ GR+ +E ++ + +
Sbjct: 142 EEIIRDVDLNGDGRVDFEEFVRMMSR 167
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 86 FQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEM-MSTAVDQDTG 143
+P EEL +AFR DKD Y++ L M G + P E++ + +S ++ + G
Sbjct: 19 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMG--YMPTEMELIELSQQINMNLG 75
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%)
Query: 20 AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIV 77
AFD+FD G I +E+GTV+R LG PT+ ++ II + G I FL ++
Sbjct: 14 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 71
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 3 LSEE--VHITNDFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTC 60
LSE+ V I D ++I +AF +FD GN I +E+GT +R+LG P E +++ II
Sbjct: 22 LSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRL 81
Query: 61 ENPEFGNIALSRFLPIVS 78
+ G + F+ ++
Sbjct: 82 DMDGDGQVDFEEFVTLLG 99
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Query: 70 LSRFLPIVSGMISENR---FQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFT 126
+ R + V ++SE R EE+ +AF+ D+D ++ K+ L M G +
Sbjct: 11 MYRGIYTVPNLLSEQRPVDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRSLG--YM 68
Query: 127 PEEID-EMMSTAVDQDT-GRIPYEYYIN 152
P E++ E++ +D D G++ +E ++
Sbjct: 69 PNEVELEVIIQRLDMDGDGQVDFEEFVT 96
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 89 ASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTA-VDQDTGRIPY 147
A E+L AFR D+D ++ + L + M G+P EE+D M+ A VDQD GR+ Y
Sbjct: 3 AGLEDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQD-GRVNY 61
Query: 148 EYYINHIMK 156
E + + +
Sbjct: 62 EEFARMLAQ 70
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 19 DAFDIFDHAGNKTIDCREVGTVLRALGGCPTEAD-IQEIIVTCENPEFGNIALSRFLPIV 77
+AF + D + ID ++ A+G + + + +I P I + FL +
Sbjct: 29 EAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGP----INFTVFLTMF 84
Query: 78 SGMISENRFQPASAEE-LLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMST 136
+ + A E+ ++ AF+ LD D K + K +L +L+ G FTPEEI M +
Sbjct: 85 G-----EKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAA 139
Query: 137 AVDQDTGRIPYE---YYINH 153
G + Y+ Y I H
Sbjct: 140 FPPDVAGNVDYKNICYVITH 159
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 61/140 (43%), Gaps = 14/140 (10%)
Query: 19 DAFDIFDHAGNKTIDCREVGTVLRALGGCPTEAD-IQEIIVTCENPEFGNIALSRFLPIV 77
+AF + D + ID ++ A+G + + + +I P I + FL +
Sbjct: 11 EAFTVIDQNADGIIDKDDLRETFAAMGRLNVKNEELDAMIKEASGP----INFTVFLTMF 66
Query: 78 SGMISENRFQPASAEE-LLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMST 136
+ + A E+ ++ AF+ LD D K + K +L +L+ G FTPEEI M +
Sbjct: 67 G-----EKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAA 121
Query: 137 AVDQDTGRIPYE---YYINH 153
G + Y+ Y I H
Sbjct: 122 FPPDVAGNVDYKNICYVITH 141
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 67/152 (44%), Gaps = 11/152 (7%)
Query: 3 LSEEVHITNDFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCEN 62
++ E+ + N+ K I + F D N ++ RE+ TVL ++G + DI I+ +
Sbjct: 27 MAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLASVG--IKKWDINRILQALDI 84
Query: 63 PEFGNIALSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEG 122
+ GNI + F M R++ + L AF +DKD Y+ K + L+
Sbjct: 85 NDRGNITYTEF------MAGCYRWKNIESTFLKAAFNKIDKDEDGYISKSDIVSLV--HD 136
Query: 123 EPFTPEEIDEMMSTAVDQDTGRIPYEYYINHI 154
+ +ID + G IP E+ IN I
Sbjct: 137 KVLDNNDIDNFFLSVHSIKKG-IPREHIINKI 167
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/134 (22%), Positives = 64/134 (47%), Gaps = 10/134 (7%)
Query: 15 KKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
++ +AF++ D + ID ++ +L ++G PT+ ++ ++ P I + FL
Sbjct: 7 QEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEAPGP----INFTMFL 62
Query: 75 PIVSGMISENRFQPASAEELLK-AFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEM 133
+ + E++++ AF D++ ++ +++L +L+ G+ FT EE+DEM
Sbjct: 63 TMFG-----EKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEM 117
Query: 134 MSTAVDQDTGRIPY 147
A G Y
Sbjct: 118 YREAPIDKKGNFNY 131
Score = 30.8 bits (68), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%)
Query: 86 FQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTA 137
F + +E +AF +D++ ++DKE L ++ G+ T E ++ MMS A
Sbjct: 1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEA 52
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 87 QPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIP 146
+ S EEL++AF+ D+D + L +M GE T +E+DEM+ A G I
Sbjct: 3 EQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHIN 62
Query: 147 YEYYI 151
YE ++
Sbjct: 63 YEEFV 67
Score = 33.5 bits (75), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 35/66 (53%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D E+++ +AF +FD GN I E+ V+ LG T+ ++ E+I + G+I
Sbjct: 5 DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYE 64
Query: 72 RFLPIV 77
F+ ++
Sbjct: 65 EFVRMM 70
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 10 TNDFEKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
+N E++IA+ AF +FD N +I E+ TV+R+LG P+EA++ +++ +
Sbjct: 2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNH 61
Query: 67 NIALSRFLPIVS 78
I S FL ++S
Sbjct: 62 QIEFSEFLALMS 73
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 43.1 bits (100), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%)
Query: 14 EKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRF 73
E+++A+ F IFD + ID E+G +LRA G E DI++++ + G I F
Sbjct: 9 EEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEF 68
Query: 74 LPIVSGM 80
L ++ G+
Sbjct: 69 LKMMEGV 75
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%)
Query: 87 QPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIP 146
+ S EEL FR DK+ ++D E L +++ GE E+I+++M + + GRI
Sbjct: 5 KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRID 64
Query: 147 YEYYI 151
++ ++
Sbjct: 65 FDEFL 69
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 42.7 bits (99), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 90 SAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEY 149
S EE+LKAFR D DN + + L ++ E GE T EE+ EM++ A D I +
Sbjct: 7 SREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDE 66
Query: 150 YINHIMK 156
+I IMK
Sbjct: 67 FI-RIMK 72
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D ++I AF +FD + TI +++ V + LG TE ++QE+I + + I
Sbjct: 6 DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDED 65
Query: 72 RFLPIV 77
F+ I+
Sbjct: 66 EFIRIM 71
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 63/143 (44%), Gaps = 1/143 (0%)
Query: 15 KKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
+++ +AF FD + I+CR++G +R +G PTE ++ E+ G++ F+
Sbjct: 11 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 70
Query: 75 PIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIE-EGEPFTPEEIDEM 133
++ + +EL AFR D + + L + M G +I+E+
Sbjct: 71 ELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEI 130
Query: 134 MSTAVDQDTGRIPYEYYINHIMK 156
+ GR+ +E ++ + +
Sbjct: 131 IRDVDLNGDGRVDFEEFVRMMSR 153
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Query: 86 FQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEID 131
+P EEL +AFR DKD Y++ L M G + P E++
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMG--YMPTEME 48
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 20 AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVSG 79
AFD+FD G I + +GTV+R LG PT+ ++ II + G I FL ++
Sbjct: 25 AFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 84
Query: 80 MISEN 84
+ E+
Sbjct: 85 QMKED 89
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 62/148 (41%), Gaps = 15/148 (10%)
Query: 19 DAFDIFDHAGNKTIDCREVGTVL-RALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIV 77
+ F +FD + D +E TV+ + G + D++E N L +
Sbjct: 1 NVFSMFDQT--QIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMGRLNVKNEELDAMIKEA 58
Query: 78 SGMISENRFQPASAEEL---------LKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPE 128
SG I+ F E+L + AF+ LD D K + K +L +L+ + + FTPE
Sbjct: 59 SGPINFTVFLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPE 118
Query: 129 EIDEMMSTAVDQDTGRIPYE---YYINH 153
EI M + G + Y+ Y I H
Sbjct: 119 EIKNMWAAFPPDVAGNVDYKNICYVITH 146
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 87 QPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIP 146
+ S EEL FR DK+ Y+D E L ++ GE T ++I+E+M + GRI
Sbjct: 2 KGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 61
Query: 147 YEYYI 151
Y+ ++
Sbjct: 62 YDEFL 66
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 14 EKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRF 73
E++++D F +FD + ID E+ +L+A G TE DI+E++ + G I F
Sbjct: 6 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 65
Query: 74 LPIVSGM 80
L + G+
Sbjct: 66 LEFMKGV 72
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++I D AF +FD G+ I E+ TV+R+L PTE ++Q++I + G I
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
Query: 71 SRFLPIVSGMISE 83
FL +++ + +
Sbjct: 66 DEFLSLMAKKVKD 78
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 90 SAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEY 149
S EEL FR DK+ Y+D E L ++ GE T ++I+E+M + GRI Y+
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
Query: 150 YI 151
++
Sbjct: 63 FL 64
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 14 EKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRF 73
E++++D F +FD + ID E+ +L+A G TE DI+E++ + G I F
Sbjct: 4 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 63
Query: 74 LPIVSGM 80
L + G+
Sbjct: 64 LEFMKGV 70
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 14 EKKIAD---AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIAL 70
E++I D AF +FD G+ I E+ TV+R+L PTE ++Q++I + G I
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
Query: 71 SRFLPIVS 78
FL +++
Sbjct: 66 DEFLSLMA 73
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 87 QPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIP 146
+ + EEL FR DK+ Y+D E L ++ GE T ++I+E+M + GRI
Sbjct: 10 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 69
Query: 147 YEYYI 151
Y+ ++
Sbjct: 70 YDEFL 74
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 14 EKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRF 73
E++++D F +FD + ID E+ +L+A G TE DI+E++ + G I F
Sbjct: 14 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 73
Query: 74 LPIVSGM 80
L + G+
Sbjct: 74 LEFMKGV 80
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 14 EKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRF 73
E++++D F +FD + ID E+ +L+A G TE DI+E++ + G I F
Sbjct: 9 EEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 68
Query: 74 LPIVSGM 80
L + G+
Sbjct: 69 LEFMKGV 75
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 87 QPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIP 146
+ + EEL FR DK+ Y+D E L ++ GE T ++I+E+M + GRI
Sbjct: 5 KGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 64
Query: 147 YEYYI 151
Y+ ++
Sbjct: 65 YDEFL 69
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/123 (22%), Positives = 57/123 (46%), Gaps = 8/123 (6%)
Query: 15 KKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
+++ +AF + D + I ++ + +LG P + ++ ++ C G + + FL
Sbjct: 16 QELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLKECP----GQLNFTAFL 71
Query: 75 PIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMM 134
+ +S P A L AF D+D + ++ ++YL L+ G+ F+ EEI +
Sbjct: 72 TLFGEKVSGT--DPEDA--LRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVW 127
Query: 135 STA 137
A
Sbjct: 128 KDA 130
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 90 SAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEY 149
S EEL FR DK+ Y+D + L ++ GE T ++I+E+M + GRI Y+
Sbjct: 4 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 63
Query: 150 YI 151
++
Sbjct: 64 FL 65
Score = 40.0 bits (92), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%)
Query: 14 EKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRF 73
E++++D F +FD + ID E+ +L+A G TE DI+E++ + G I F
Sbjct: 5 EEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEF 64
Query: 74 LPIVSGM 80
L + G+
Sbjct: 65 LEFMKGV 71
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 8 HITNDFEKKIADAFDIFD-HAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
+T + + + AFDIF A + +I +E+G V+R LG PT ++QE+I + G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 67 NIALSRFLPIV 77
+ FL ++
Sbjct: 71 TVDFDEFLVMM 81
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 8 HITNDFEKKIADAFDIFD-HAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
+T + + + AFDIF A + +I +E+G V+R LG PT ++QE+I + G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 67 NIALSRFLPIV 77
+ FL ++
Sbjct: 71 TVDFDEFLVMM 81
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 8 HITNDFEKKIADAFDIF-DHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
+T++ + + AFDIF A + I +E+G V+R LG PT ++QE+I + G
Sbjct: 11 QLTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 67 NIALSRFLPIV 77
+ FL ++
Sbjct: 71 TVDFDEFLVMM 81
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 8 HITNDFEKKIADAFDIFD-HAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
+T + + + AFDIF A + +I +E+G V+R LG PT ++QE+I + G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 67 NIALSRFLPIV 77
+ FL ++
Sbjct: 71 TVDFDEFLVMM 81
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 5/84 (5%)
Query: 73 FLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDE 132
FL +++ +SE + EE+LKAF+ D D + + L ++ E GE T EE+ E
Sbjct: 6 FLTVMTQKMSE----KDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQE 61
Query: 133 MMSTAVDQDTGRIPYEYYINHIMK 156
M+ A G + + ++ IMK
Sbjct: 62 MIDEADRDGDGEVSEQEFL-RIMK 84
Score = 30.4 bits (67), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D +++I AF +FD I + + V + LG T+ ++QE+I + G ++
Sbjct: 18 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQ 77
Query: 72 RFLPIV 77
FL I+
Sbjct: 78 EFLRIM 83
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 8 HITNDFEKKIADAFDIF-DHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
+T + + + AFDIF A + I +E+G V+R LG PT ++QE+I + G
Sbjct: 11 QLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 67 NIALSRFLPIV 77
+ FL ++
Sbjct: 71 TVDFDEFLVMM 81
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 8 HITNDFEKKIADAFDIF-DHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
+T + + + AFDIF A + I +E+G V+R LG PT ++QE+I + G
Sbjct: 11 QLTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 67 NIALSRFLPIV 77
+ FL ++
Sbjct: 71 TVDFDEFLVMM 81
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 37.0 bits (84), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 14 EKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRF 73
+++I +AFD+FD +ID E+ +RALG + +I E++ + G I F
Sbjct: 6 KQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDF 65
Query: 74 LPIVSGMISENR 85
L I++ I +NR
Sbjct: 66 LDIMTEKI-KNR 76
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 36.6 bits (83), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 9/140 (6%)
Query: 15 KKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
+++ +AF + D + ID ++ +LG P + ++ ++ P + + FL
Sbjct: 2 QEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLKEAPGP----LNFTMFL 57
Query: 75 PIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMM 134
I S +S S E + AF D+D L+ EY+ L+ G+ F +E+ M
Sbjct: 58 SIFSDKLS----GTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEM-RMT 112
Query: 135 STAVDQDTGRIPYEYYINHI 154
+ G+ Y ++ I
Sbjct: 113 FKEAPVEGGKFDYVRFVAMI 132
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 36.2 bits (82), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 34/70 (48%)
Query: 88 PASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPY 147
A E+ +KAF+ DK++ + L ++ GE T E+DE++ G I Y
Sbjct: 1 KAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDY 60
Query: 148 EYYINHIMKS 157
+ +I +++
Sbjct: 61 KKFIEDVLRQ 70
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 4/68 (5%)
Query: 10 TNDFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIA 69
T DF K AF +FD + ++ +L LG T+A++ E++ E G I
Sbjct: 4 TEDFVK----AFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEID 59
Query: 70 LSRFLPIV 77
+F+ V
Sbjct: 60 YKKFIEDV 67
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 36.2 bits (82), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 8 HITNDFEKKIADAFDIFD-HAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
+T + + + AFDIF A + I +E+G V+R LG PT ++QE+I + G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 67 NIALSRFLPIV 77
+ FL ++
Sbjct: 71 TVDFDEFLVMM 81
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 93 ELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEYYIN 152
EL +AFR LDK+ K + + L ++ G+ T +EI+ M++ +G + YE +
Sbjct: 8 ELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKC 67
Query: 153 HIMKSE 158
+M S+
Sbjct: 68 LMMSSD 73
Score = 26.2 bits (56), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 14/60 (23%), Positives = 28/60 (46%)
Query: 14 EKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRF 73
E+++ +AF + D I + +L++LG TE +I+ +I + G + F
Sbjct: 6 ERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEF 65
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 35.4 bits (80), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 8 HITNDFEKKIADAFDIFD-HAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
+T + + + AFDIF A + I +E+G V+R LG PT ++QE+I + G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 67 NIALSRFLPIVS 78
+ +L +++
Sbjct: 71 TVDFDEWLVMMA 82
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 15 KKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
+++ +AF + D + ID ++ + +LG P + ++ ++ P + + FL
Sbjct: 23 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPGP----LNFTMFL 78
Query: 75 PIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMM 134
I S +S S E + AF D+ + L+ EY+ L+ G+ F +E+ M
Sbjct: 79 SIFSDKLS----GTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEM-RMT 133
Query: 135 STAVDQDTGRIPYEYYINHIMKS 157
+ G+ Y ++ I S
Sbjct: 134 FKEAPVEGGKFDYVRFVAMIKGS 156
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 35.0 bits (79), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 15 KKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
+++ +AF + D + ID ++ + +LG P + ++ ++ P + + FL
Sbjct: 23 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPGP----LNFTMFL 78
Query: 75 PIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMM 134
I S +S S E + AF D+ + L+ EY+ L+ G+ F +E+ M
Sbjct: 79 SIFSDKLS----GTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEM-RMT 133
Query: 135 STAVDQDTGRIPYEYYINHIMKS 157
+ G+ Y ++ I S
Sbjct: 134 FKEAPVEGGKFDYVRFVAMIKGS 156
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 35.0 bits (79), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 87 QPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIP 146
+ + EE+LKAF+ D D + + L ++ E GE T EE+ EM+ A G +
Sbjct: 6 EKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVS 65
Query: 147 YEYYINHIMK 156
+ ++ IMK
Sbjct: 66 EQEFL-RIMK 74
Score = 30.8 bits (68), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 33/66 (50%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALS 71
D +++I AF +FD I + + V + LG T+ ++QE+I + G ++
Sbjct: 8 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQ 67
Query: 72 RFLPIV 77
FL I+
Sbjct: 68 EFLRIM 73
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/143 (21%), Positives = 62/143 (43%), Gaps = 9/143 (6%)
Query: 15 KKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
+++ +AF + D + ID ++ + +LG P + ++ ++ P + + FL
Sbjct: 19 QEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLKEAPGP----LNFTMFL 74
Query: 75 PIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMM 134
I S +S S E + AF D+ + L+ EY+ L+ G+ F +E+ M
Sbjct: 75 SIFSDKLS----GTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDEM-RMT 129
Query: 135 STAVDQDTGRIPYEYYINHIMKS 157
+ G+ Y ++ I S
Sbjct: 130 FKEAPVEGGKFDYVRFVAMIKGS 152
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 34.7 bits (78), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 8 HITNDFEKKIADAFDIFD-HAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
+T + + + AFDIF A + I +E+G V+R LG PT ++QE+I + G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 67 NIALSRFLPIV 77
+ +L ++
Sbjct: 71 TVDFDEWLVMM 81
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 27/42 (64%)
Query: 15 KKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEI 56
+++ +AF FD + I+CR++G +R +G PTE ++ E+
Sbjct: 10 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIEL 51
Score = 28.1 bits (61), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 86 FQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEM-MSTAVDQDTG 143
+P EEL +AFR DKD Y++ L M G + P E++ + +S ++ + G
Sbjct: 4 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMG--YMPTEMELIELSQQINMNLG 60
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 34.3 bits (77), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 92 EELLKAFRTLDKDNKSYLDKEYLTKLMIEEG-EPFTPEEIDEMMSTAVDQDTGRIPYEYY 150
EE+L+AF+ D + +D + +M + G EP T E++E M A + G I +
Sbjct: 8 EEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEF 67
Query: 151 INHIMKSEERL 161
++ I KS+ L
Sbjct: 68 MDLIKKSKNAL 78
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 33.9 bits (76), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 16/68 (23%), Positives = 36/68 (52%)
Query: 92 EELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEYYI 151
+EL +AFR DK+ Y+ + + +++ E E + E++D M+ +G + +E ++
Sbjct: 3 QELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFM 62
Query: 152 NHIMKSEE 159
+ +E
Sbjct: 63 GVMTGGDE 70
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 33.5 bits (75), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 4/121 (3%)
Query: 14 EKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRF 73
+++I +AF +FD + +D E+ ++ALG + +I ++I ++ + F
Sbjct: 22 KQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKYDDF 81
Query: 74 LPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEM 133
IV G E + +E+ +AF+ D D+ + + L ++ E GE T EE+ M
Sbjct: 82 Y-IVMG---EKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAM 137
Query: 134 M 134
+
Sbjct: 138 I 138
>pdb|1PON|A Chain A, Site Iii-Site Iv Troponin C Heterodimer, Nmr
pdb|1CTA|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTA|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|A Chain A, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
pdb|1CTD|B Chain B, Determination Of The Solution Structure Of A Synthetic
Two- Site Calcium-Binding Homodimeric Protein Domain By
Nmr Spectroscopy
Length = 36
Score = 33.1 bits (74), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%)
Query: 14 EKKIADAFDIFDHAGNKTIDCREVGTVLRALG 45
E+++A+AF IFD + ID E+G +LRA G
Sbjct: 4 EEELANAFRIFDKNADGYIDIEELGEILRATG 35
Score = 27.7 bits (60), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 90 SAEELLKAFRTLDKDNKSYLDKEYLTKLM 118
S EEL AFR DK+ Y+D E L +++
Sbjct: 3 SEEELANAFRIFDKNADGYIDIEELGEIL 31
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 32.7 bits (73), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 8 HITNDFEKKIADAFDIFD-HAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFG 66
+T + + + AFDIF A + I +E+G V R LG PT ++QE I + G
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSG 70
Query: 67 NIALSRFL 74
+ FL
Sbjct: 71 TVDFDEFL 78
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 32.3 bits (72), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/145 (21%), Positives = 61/145 (42%), Gaps = 13/145 (8%)
Query: 15 KKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFL 74
++ +AF + D + I ++ +LG TE ++ ++ P I + FL
Sbjct: 57 QEFKEAFQLIDQDKDGFISKNDIRATFDSLGRLCTEQELDSMVAEAPGP----INFTMFL 112
Query: 75 PIVSGMISENRFQPASAEE--LLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDE 132
I I+ + EE ++ AF D+ + +E L + + GE F+ +E+D+
Sbjct: 113 TIFGDRIA------GTDEEDVIVNAFNLFDEGD-GKCKEETLKRSLTTWGEKFSQDEVDQ 165
Query: 133 MMSTAVDQDTGRIPYEYYINHIMKS 157
+S A G I + + + K
Sbjct: 166 ALSEAPIDGNGLIDIKKFAQILTKG 190
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 21/39 (53%)
Query: 19 DAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEII 57
D F +FD G I +G LRA+G PT +Q+II
Sbjct: 8 DIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDII 46
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 4/72 (5%)
Query: 51 ADIQEIIVTCENPEFGNIALSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLD 110
A++Q++I + G I FL M++ S EE+ +AFR DKD Y+
Sbjct: 1 AELQDMINEVDADGNGTIDFPEFLT----MMARKMKDTDSEEEIREAFRVFDKDGNGYIS 56
Query: 111 KEYLTKLMIEEG 122
L +M G
Sbjct: 57 AAELRHVMTNLG 68
Score = 27.3 bits (59), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 12 DFEKKIADAFDIFDHAGNKTIDCREVGTVLRALG 45
D E++I +AF +FD GN I E+ V+ LG
Sbjct: 35 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 68
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 30.8 bits (68), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Query: 70 LSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEE 129
L +F + +I++ E+L F LD+D K Y+ KE L K + ++G P
Sbjct: 31 LLKFQKLAMTIIAQQS-NDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKL-PYN 88
Query: 130 IDEMMSTAVDQDTGRIPYEYYI 151
D ++ +G+I Y +I
Sbjct: 89 FDLLLDQIDSDGSGKIDYTEFI 110
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 30.4 bits (67), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 8/119 (6%)
Query: 14 EKKIADAFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRF 73
+++I +AF +FD + +D E+ +ALG E +EI+ + + L ++
Sbjct: 22 KQEIYEAFSLFDXNNDGFLDYHELKVAXKALG---FELPKREILDLIDEYDSEGRHLXKY 78
Query: 74 --LPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEI 130
IV G E + +E+ +AF+ D D+ + + L ++ E GE T EE+
Sbjct: 79 DDFYIVXG---EKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEEL 134
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 30.4 bits (67), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 28/158 (17%)
Query: 15 KKIADAFDIFDHAGNKTIDCREV-----------GTVLRALGGCPTEADIQEIIVTCENP 63
K++ F D+ G+ +D +E+ G + L EA++ I+ + +
Sbjct: 40 KELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFD 99
Query: 64 EFGNIALSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGE 123
G I S F+ + ++ S E LL AF+ D D + E L +L
Sbjct: 100 RNGYIEYSEFVTVCM-----DKQLLLSRERLLAAFQQFDSDGSGKITNEELGRL------ 148
Query: 124 PFTPEEIDEMMSTAVDQDT-----GRIPYEYYINHIMK 156
F E+D+ V Q+ G + +E ++ + K
Sbjct: 149 -FGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQK 185
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 30.4 bits (67), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/116 (22%), Positives = 52/116 (44%), Gaps = 12/116 (10%)
Query: 42 RALGGCPTEADIQEIIVTCENPEFG-NIALSRFLPIVSGMISENRFQPASAEELLKAFRT 100
R LG P+ D ++I +G N+ ++L +S + + + EEL+K F
Sbjct: 42 RKLGLAPSSIDEKKI-----KELYGDNLTYEQYLEYLSICVHD----KDNVEELIKMFAH 92
Query: 101 LDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEYYINHIMK 156
D + YL K + ++ G+ T +E + ++ +D I Y+ + I++
Sbjct: 93 FDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAFSSED--NIDYKLFCEDILQ 146
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 29.6 bits (65), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 21/41 (51%)
Query: 21 FDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCE 61
FDIFD G+ +I E T G CP++ D ++ C+
Sbjct: 122 FDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCD 162
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 29.3 bits (64), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 90 SAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEP----FTPEEIDEMMSTAVDQDTGRI 145
SA ++ FR +D D YLD+E L K +++ E T E +M+ A + G+I
Sbjct: 40 SANQVKDVFRFIDNDQSGYLDEEEL-KFFLQKFESGARELTESETKSLMAAADNDGDGKI 98
Query: 146 PYEYY 150
E +
Sbjct: 99 GAEEF 103
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 62/158 (39%), Gaps = 28/158 (17%)
Query: 15 KKIADAFDIFDHAGNKTIDCREV-----------GTVLRALGGCPTEADIQEIIVTCENP 63
K++ F D+ G+ +D +E+ G + L EA++ I+ + +
Sbjct: 314 KELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFD 373
Query: 64 EFGNIALSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGE 123
G I S F+ + ++ S E LL AF+ D D + E L +L
Sbjct: 374 RNGYIEYSEFVTVCM-----DKQLLLSRERLLAAFQQFDSDGSGKITNEELGRL------ 422
Query: 124 PFTPEEIDEMMSTAVDQDT-----GRIPYEYYINHIMK 156
F E+D+ V Q+ G + +E ++ + K
Sbjct: 423 -FGVTEVDDETWHQVLQECDKNNDGEVDFEEFVEMMQK 459
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 95 LKAFR--TLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEYYIN 152
+K R T K NK LD+ Y+ M G P+ + +++ V T +PY ++
Sbjct: 51 IKVLRENTSPKANKEILDEAYV---MAGVGSPYVSRLLGICLTSTVQLVTQLMPYGCLLD 107
Query: 153 HIMKSEERL 161
H+ ++ RL
Sbjct: 108 HVRENRGRL 116
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 28.9 bits (63), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 15 KKIADA-FDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCE 61
++ DA FDIFD G+ TI E R G P+E D ++ C+
Sbjct: 112 REWGDAVFDIFDKDGSGTITLDEWKAYGRISGISPSEEDCEKTFQHCD 159
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 28.5 bits (62), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/90 (21%), Positives = 42/90 (46%), Gaps = 5/90 (5%)
Query: 20 AFDIFDHAGNKTIDCREVGTVLRALGGCPTEADIQEIIVTCENPEFGNIALSRFLPIVSG 79
+F+ FD +DC + L ++G EA+ I+ + G + F+ +S
Sbjct: 730 SFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSR 789
Query: 80 MISENRFQPASAEELLKAFRTLDKDNKSYL 109
++ +A++++ +F+ L D K+Y+
Sbjct: 790 ETADT----DTADQVMASFKILAGD-KNYI 814
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 28.5 bits (62), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/75 (21%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 86 FQPASAEELLKAFRTLDKDNKSYLDKEYLTKLM---IEEGEPFTPEEIDEMMSTAVDQDT 142
+ SA+++ K F LDKD ++D++ L ++ + + +E +M+
Sbjct: 35 LKKKSADDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGD 94
Query: 143 GRIPYEYYINHIMKS 157
G+I E + + +S
Sbjct: 95 GKIGVEEFSTLVAES 109
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 28.1 bits (61), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/86 (18%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Query: 74 LPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEM 133
+P +G+ + + +EL++ FR +D D + L + G PF+ +++
Sbjct: 9 MPTSTGVYAPSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKL 68
Query: 134 MSTAVDQDTGRIPYEYY--INHIMKS 157
+ +G I ++ + ++H + S
Sbjct: 69 LHMYDKNHSGEITFDEFKDLHHFILS 94
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 28.1 bits (61), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 97 AFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEYYI 151
FRT D+DN +DK L + + G + + D ++ Q G+I ++ +I
Sbjct: 79 VFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 133
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 27.7 bits (60), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 6 EVHITNDFEKKIADAFDIFDHAGNKTIDCREVGTVLRAL-GGCPTEADIQEI----IVTC 60
+ + D E+K+ AF I+D + I E+ VL+ + G + +Q+I I+
Sbjct: 81 QFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINA 140
Query: 61 ENPEFGNIALSRFLPIVSGM 80
+ G I+ F +V G+
Sbjct: 141 DKDGDGRISFEEFCAVVGGL 160
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 6 EVHITNDFEKKIADAFDIFDHAGNKTIDCREVGTVLRAL-GGCPTEADIQEI----IVTC 60
+ + D E+K+ AF I+D + I E+ VL+ + G + +Q+I I+
Sbjct: 67 QFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINA 126
Query: 61 ENPEFGNIALSRFLPIVSGM 80
+ G I+ F +V G+
Sbjct: 127 DKDGDGRISFEEFCAVVGGL 146
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 27.7 bits (60), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 6 EVHITNDFEKKIADAFDIFDHAGNKTIDCREVGTVLRAL-GGCPTEADIQEI----IVTC 60
+ + D E+K+ AF I+D + I E+ VL+ + G + +Q+I I+
Sbjct: 66 QFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINA 125
Query: 61 ENPEFGNIALSRFLPIVSGM 80
+ G I+ F +V G+
Sbjct: 126 DKDGDGRISFEEFCAVVGGL 145
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 27.7 bits (60), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 6 EVHITNDFEKKIADAFDIFDHAGNKTIDCREVGTVLRAL-GGCPTEADIQEI----IVTC 60
+ + D E+K+ AF I+D + I E+ VL+ + G + +Q+I I+
Sbjct: 80 QFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINA 139
Query: 61 ENPEFGNIALSRFLPIVSGM 80
+ G I+ F +V G+
Sbjct: 140 DKDGDGRISFEEFCAVVGGL 159
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
pdb|3GL1|B Chain B, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
Length = 387
Score = 27.7 bits (60), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 7/54 (12%)
Query: 85 RFQPASAEELLKA--FRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMST 136
RF S ++ +K F+ +D D ++ +YL EE + F+P+EI M+ T
Sbjct: 82 RFDDESVQKDMKTWPFKVIDVDGNPVIEVQYL-----EETKTFSPQEISAMVLT 130
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 27.3 bits (59), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/75 (20%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 86 FQPASAEELLKAFRTLDKDNKSYLDKEYLTKLM---IEEGEPFTPEEIDEMMSTAVDQDT 142
+ SA+++ K F LDKD +++++ L ++ + + +E +M+ +
Sbjct: 35 LKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGS 94
Query: 143 GRIPYEYYINHIMKS 157
G+I E + + +S
Sbjct: 95 GKIEVEEFSTLVAES 109
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 27.3 bits (59), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 97 AFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEYYI 151
FRT D+DN +DK L + + G + + D ++ Q G+I ++ +I
Sbjct: 76 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 130
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 26.9 bits (58), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 97 AFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEYYI 151
FRT D+DN +DK L + + G + + D ++ Q G+I ++ +I
Sbjct: 75 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 129
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 97 AFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEYYI 151
FRT D+DN +DK L + + G + + D ++ Q G+I ++ +I
Sbjct: 79 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 133
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 97 AFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEYYI 151
FRT D+DN +DK L + + G + + D ++ Q G+I ++ +I
Sbjct: 98 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 152
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 26.9 bits (58), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 97 AFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRIPYEYYI 151
FRT D+DN +DK L + + G + + D ++ Q G+I ++ +I
Sbjct: 97 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFI 151
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 26.6 bits (57), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/75 (20%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 86 FQPASAEELLKAFRTLDKDNKSYLDKEYLTKLM---IEEGEPFTPEEIDEMMSTAVDQDT 142
+ SA+++ K F LDKD +++++ L ++ + + +E +M+
Sbjct: 35 LKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGD 94
Query: 143 GRIPYEYYINHIMKS 157
G+I E + + +S
Sbjct: 95 GKIGVEEFSTLVAES 109
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 38/97 (39%), Gaps = 12/97 (12%)
Query: 52 DIQEIIVTCENPEFGNIALSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDK 111
DI + C++P+ +F SG+ SA ++ FR +D D YLD
Sbjct: 10 DIAAALQECQDPD--TFEPQKFFQ-TSGL------SKMSASQVKDIFRFIDNDQSGYLDG 60
Query: 112 E---YLTKLMIEEGEPFTPEEIDEMMSTAVDQDTGRI 145
+ Y + + T E +M A + G+I
Sbjct: 61 DELKYFLQKFQSDARELTESETKSLMDAADNDGDGKI 97
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 26.6 bits (57), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 15/71 (21%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 90 SAEELLKAFRTLDKDNKSYLDKEYLTKLM---IEEGEPFTPEEIDEMMSTAVDQDTGRIP 146
SA+++ K F LDKD +++++ L ++ + + +E +M+ G+I
Sbjct: 3 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIG 62
Query: 147 YEYYINHIMKS 157
E + + +S
Sbjct: 63 VEEFSTLVAES 73
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 26.2 bits (56), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 11/78 (14%)
Query: 87 QPASAEELLKAFRTLDKDNKSYLDKEYLTKLMIEEGEPFTPEEID------EMMSTAVDQ 140
+ SA+++ K F LDKD +++++ L ++ + F+P+ D +M+ A D+
Sbjct: 37 KKKSADDVKKVFHMLDKDKSGFIEEDELGFIL----KGFSPDARDLSAKETKMLMAAGDK 92
Query: 141 DT-GRIPYEYYINHIMKS 157
D G+I + + + +S
Sbjct: 93 DGDGKIGVDEFSTLVAES 110
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/75 (20%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 86 FQPASAEELLKAFRTLDKDNKSYLDKEYLTKLM---IEEGEPFTPEEIDEMMSTAVDQDT 142
+ SA+++ K F LDKD +++++ L ++ + + +E +M+
Sbjct: 35 LKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGD 94
Query: 143 GRIPYEYYINHIMKS 157
G+I E + + +S
Sbjct: 95 GKIGVEEFSTLVAES 109
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 26.2 bits (56), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 70 LSRFLPIVSGMISENRFQPASAEELLKAFRTLDKDNKSYLDKEYLTKLM 118
++R LP+ + + + +E KAF D+D Y+D+ L L+
Sbjct: 169 MARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDENELDALL 217
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.316 0.135 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,866,332
Number of Sequences: 62578
Number of extensions: 194364
Number of successful extensions: 1139
Number of sequences better than 100.0: 225
Number of HSP's better than 100.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 587
Number of HSP's gapped (non-prelim): 363
length of query: 161
length of database: 14,973,337
effective HSP length: 91
effective length of query: 70
effective length of database: 9,278,739
effective search space: 649511730
effective search space used: 649511730
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.7 bits)