BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16402
(77 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q2T9M1|PICK1_BOVIN PRKCA-binding protein OS=Bos taurus GN=PICK1 PE=2 SV=1
Length = 417
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 13/71 (18%)
Query: 1 MSTTTADALDSLLDDYLQGLNQSLSRAILCNDTLVKKMEELENTEQMYKGLVEHCKKVLK 60
MS+ TADAL LSRAILCND LVK++EELE T ++YKG+ EH K +L+
Sbjct: 129 MSSGTADAL-------------GLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLR 175
Query: 61 GFLGILRVYKG 71
F + + ++
Sbjct: 176 AFYELSQTHRA 186
>sp|Q9EP80|PICK1_RAT PRKCA-binding protein OS=Rattus norvegicus GN=Pick1 PE=1 SV=1
Length = 416
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 13/71 (18%)
Query: 1 MSTTTADALDSLLDDYLQGLNQSLSRAILCNDTLVKKMEELENTEQMYKGLVEHCKKVLK 60
MS+ TADAL LSRAILCND LVK++EELE T ++YKG+ EH K +L+
Sbjct: 129 MSSGTADAL-------------GLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLR 175
Query: 61 GFLGILRVYKG 71
F + + ++
Sbjct: 176 AFYELSQTHRA 186
>sp|Q62083|PICK1_MOUSE PRKCA-binding protein OS=Mus musculus GN=Pick1 PE=1 SV=2
Length = 416
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 13/71 (18%)
Query: 1 MSTTTADALDSLLDDYLQGLNQSLSRAILCNDTLVKKMEELENTEQMYKGLVEHCKKVLK 60
MS+ TADAL LSRAILCND LVK++EELE T ++YKG+ EH K +L+
Sbjct: 129 MSSGTADAL-------------GLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLR 175
Query: 61 GFLGILRVYKG 71
F + + ++
Sbjct: 176 AFYELSQTHRA 186
>sp|Q9NRD5|PICK1_HUMAN PRKCA-binding protein OS=Homo sapiens GN=PICK1 PE=1 SV=2
Length = 415
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 13/71 (18%)
Query: 1 MSTTTADALDSLLDDYLQGLNQSLSRAILCNDTLVKKMEELENTEQMYKGLVEHCKKVLK 60
MS+ TADAL LSRAILCND LVK++EELE T ++YKG+ EH K +L+
Sbjct: 129 MSSGTADAL-------------GLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLR 175
Query: 61 GFLGILRVYKG 71
F + + ++
Sbjct: 176 AFYELSQTHRA 186
>sp|Q5REH1|PICK1_PONAB PRKCA-binding protein OS=Pongo abelii GN=PICK1 PE=2 SV=1
Length = 415
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 13/71 (18%)
Query: 1 MSTTTADALDSLLDDYLQGLNQSLSRAILCNDTLVKKMEELENTEQMYKGLVEHCKKVLK 60
MS+ TADAL LSRAILCND LVK++EELE T ++YKG+ EH K +L+
Sbjct: 129 MSSGTADAL-------------GLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLR 175
Query: 61 GFLGILRVYKG 71
F + + ++
Sbjct: 176 AFYELSQTHRA 186
>sp|Q4R7Q5|PICK1_MACFA PRKCA-binding protein OS=Macaca fascicularis GN=PICK1 PE=2 SV=1
Length = 415
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 13/71 (18%)
Query: 1 MSTTTADALDSLLDDYLQGLNQSLSRAILCNDTLVKKMEELENTEQMYKGLVEHCKKVLK 60
MS+ TADAL LSRAILCND LVK++EELE T ++YKG+ EH K +L+
Sbjct: 129 MSSGTADAL-------------GLSRAILCNDGLVKRLEELERTAELYKGMTEHTKNLLR 175
Query: 61 GFLGILRVYKG 71
F + + ++
Sbjct: 176 VFYELSQTHRA 186
>sp|Q9XBQ9|STHA_AZOVI Soluble pyridine nucleotide transhydrogenase OS=Azotobacter
vinelandii GN=sthA PE=1 SV=1
Length = 464
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 7 DALDSLLDDYLQGLNQSLSRAILCNDTLVKKMEELENTEQMYKGLVEHCK 56
D L S LDD + + SLS + N+ L++ EE E E + G++ H K
Sbjct: 208 DQLLSFLDDEI---SDSLSYHLRNNNVLIRHNEEYERVEGLDNGVILHLK 254
>sp|C1DR10|STHA_AZOVD Soluble pyridine nucleotide transhydrogenase OS=Azotobacter
vinelandii (strain DJ / ATCC BAA-1303) GN=sthA PE=3 SV=1
Length = 464
Score = 30.4 bits (67), Expect = 3.6, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 3/50 (6%)
Query: 7 DALDSLLDDYLQGLNQSLSRAILCNDTLVKKMEELENTEQMYKGLVEHCK 56
D L S LDD + + SLS + N+ L++ EE E E + G++ H K
Sbjct: 208 DQLLSFLDDEI---SDSLSYHLRNNNVLIRHNEEYERVEGLDNGVILHLK 254
>sp|Q83AU6|PGK_COXBU Phosphoglycerate kinase OS=Coxiella burnetii (strain RSA 493 / Nine
Mile phase I) GN=pgk PE=3 SV=1
Length = 391
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 12 LLDDYLQGLNQSLSRAILCNDTLVKKMEELENTEQMYKGLVEHC 55
L++D+L+G+ +AILC + K E NTE + K + E C
Sbjct: 86 LINDWLKGVAVEPGQAILCENVRFNKGENENNTE-LAKRMAELC 128
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,516,026
Number of Sequences: 539616
Number of extensions: 833172
Number of successful extensions: 2791
Number of sequences better than 100.0: 13
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 2782
Number of HSP's gapped (non-prelim): 13
length of query: 77
length of database: 191,569,459
effective HSP length: 48
effective length of query: 29
effective length of database: 165,667,891
effective search space: 4804368839
effective search space used: 4804368839
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)