RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy16410
         (88 letters)



>d1yvua1 b.34.14.1 (A:4-314) Argonaute homologue Aq_1447 {Aquifex
           aeolicus [TaxId: 63363]}
          Length = 311

 Score = 25.0 bits (54), Expect = 1.2
 Identities = 9/22 (40%), Positives = 14/22 (63%)

Query: 8   LGLLRYWEKSYSAAPRNNGWWV 29
           L L+RY  + Y  A R+ GW++
Sbjct: 281 LNLIRYILRRYVKALRDYGWYI 302


>d1x1na1 c.1.8.1 (A:2-524) Amylomaltase MalQ {Potato (Solanum
           tuberosum) [TaxId: 4113]}
          Length = 523

 Score = 22.7 bits (48), Expect = 8.0
 Identities = 4/23 (17%), Positives = 5/23 (21%)

Query: 7   ILGLLRYWEKSYSAAPRNNGWWV 29
             G   +W           G W 
Sbjct: 322 FRGFAGFWAVPSEEKIAILGRWK 344


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.330    0.142    0.478 

Gapped
Lambda     K      H
   0.267   0.0522    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 340,412
Number of extensions: 12312
Number of successful extensions: 26
Number of sequences better than 10.0: 1
Number of HSP's gapped: 26
Number of HSP's successfully gapped: 5
Length of query: 88
Length of database: 2,407,596
Length adjustment: 53
Effective length of query: 35
Effective length of database: 1,679,906
Effective search space: 58796710
Effective search space used: 58796710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 47 (22.4 bits)