Query psy16411
Match_columns 214
No_of_seqs 159 out of 764
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 20:38:32 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16411.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16411hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ffu_A Ppgalnact-2, polypeptid 99.9 5.9E-28 2E-32 223.7 9.3 129 1-213 272-401 (501)
2 1xhb_A Polypeptide N-acetylgal 99.9 4.2E-28 1.4E-32 222.5 7.9 131 1-213 240-370 (472)
3 2d7i_A Polypeptide N-acetylgal 99.9 4.3E-27 1.5E-31 222.4 9.3 129 1-213 320-453 (570)
4 3a21_A Putative secreted alpha 99.4 6.4E-15 2.2E-19 140.7 -3.9 90 103-213 423-516 (614)
5 3a21_A Putative secreted alpha 98.9 4.1E-11 1.4E-15 114.4 -4.5 153 38-212 423-600 (614)
6 1xhb_A Polypeptide N-acetylgal 98.5 4.8E-09 1.6E-13 95.7 -3.5 120 72-212 315-450 (472)
7 2ffu_A Ppgalnact-2, polypeptid 98.4 1.1E-08 3.6E-13 94.4 -3.6 120 72-212 347-482 (501)
8 2d7i_A Polypeptide N-acetylgal 97.5 3.2E-06 1.1E-10 79.5 -3.9 67 47-115 301-367 (570)
9 1abr_B Abrin-A; glycosidase/ca 96.2 0.0012 4.3E-08 55.9 1.2 100 95-213 13-126 (267)
10 1knl_A Endo-1,4-beta-xylanase 95.3 0.0026 8.7E-08 47.5 -0.5 100 94-212 3-116 (130)
11 1m2t_B Mistletoe lectin I B ch 94.7 0.0063 2.2E-07 51.3 0.5 101 94-213 8-122 (263)
12 3c9z_A Agglutinin II, SNA-II; 94.6 0.0037 1.3E-07 52.5 -1.3 97 96-212 3-112 (258)
13 1ggp_B TKL-1, protein (lectin 93.1 0.012 4.1E-07 49.4 -1.0 95 98-212 6-111 (254)
14 2aai_B Ricin (B chain); glycos 92.5 0.019 6.4E-07 48.4 -0.5 98 96-212 9-120 (262)
15 3a07_A Actinohivin; carbohydra 91.7 0.022 7.5E-07 42.1 -0.9 35 96-133 5-40 (118)
16 2vlc_A Cinnamomin, type 2 ribo 91.5 0.047 1.6E-06 51.4 0.9 99 95-212 315-427 (570)
17 2aai_B Ricin (B chain); glycos 90.5 0.031 1.1E-06 47.0 -1.3 31 100-133 144-174 (262)
18 1vcl_A Hemolytic lectin CEL-II 90.1 0.26 8.9E-06 45.1 4.4 71 98-213 109-181 (432)
19 2d1z_A Endo-1,4-beta-D-xylanas 88.5 0.064 2.2E-06 48.6 -0.9 100 94-212 309-422 (436)
20 1ggp_B TKL-1, protein (lectin 87.7 0.076 2.6E-06 44.4 -0.8 27 186-212 212-239 (254)
21 1vcl_A Hemolytic lectin CEL-II 81.3 0.96 3.3E-05 41.3 3.4 25 189-213 110-134 (432)
22 2vlc_A Cinnamomin, type 2 ribo 60.3 9.8 0.00033 35.5 5.0 27 103-132 454-480 (570)
23 3pg0_A Threefoil; symmetric de 54.3 6.6 0.00023 29.8 2.3 27 186-212 27-55 (165)
24 3a07_A Actinohivin; carbohydra 54.0 4.9 0.00017 29.0 1.4 18 187-204 44-61 (118)
25 2dry_A 29-kDa galactose-bindin 46.9 8 0.00027 28.7 1.7 28 99-126 5-36 (130)
26 2d1z_A Endo-1,4-beta-D-xylanas 46.9 6.7 0.00023 35.1 1.4 27 187-213 312-340 (436)
27 2ao3_A 29-kDa galactose-bindin 41.0 11 0.00039 27.3 1.7 34 99-132 5-44 (130)
28 1m2t_B Mistletoe lectin I B ch 40.0 9 0.00031 31.6 1.1 26 187-212 222-248 (263)
29 3c9z_A Agglutinin II, SNA-II; 35.3 13 0.00046 30.3 1.4 25 187-213 46-70 (258)
30 3pg0_A Threefoil; symmetric de 33.8 21 0.00071 26.9 2.2 41 92-133 23-67 (165)
31 1abr_B Abrin-A; glycosidase/ca 29.4 23 0.00079 29.1 1.9 25 187-213 59-83 (267)
32 3nbc_A Ricin B-like lectin; la 25.6 26 0.00089 26.9 1.5 24 189-212 105-128 (148)
No 1
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=99.94 E-value=5.9e-28 Score=223.71 Aligned_cols=129 Identities=53% Similarity=1.045 Sum_probs=114.3
Q ss_pred CeeecceeEEecccceeeeccCCCCCCCCCCchhhhhhhhHHHHHHhhhhhhhhhhhcCCCcccceeecCccEEEeeccc
Q psy16411 1 VWQCGGILEIIPCSHVGHVFRDKSPYTFPGGVSKIVLHNAARVAEVWMDEWRDFYYAMNPGKSASVWMCGGVLEIATCSH 80 (214)
Q Consensus 1 ~W~CGG~~~~~PcsrVgh~~r~~~py~~p~~~~~~~~~N~~R~A~vWmDe~~~~~y~~n~els~r~w~cGg~~e~~~Cs~ 80 (214)
+|+||++++++||++|.|++|+.+||++|.+......+|..|++++|||+|+.++|..+|.+
T Consensus 272 l~~~G~~i~~~p~~~v~H~~r~~~~~~~~~~~~~~~~~n~~r~~~~w~d~~~~~~y~~~p~~------------------ 333 (501)
T 2ffu_A 272 VWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSA------------------ 333 (501)
T ss_dssp HHHTTCEEEEEEEEEEEECCCSSCCSCCTTCHHHHHHHHHHHHHHHHCGGGHHHHHHHCGGG------------------
T ss_pred HHhcCCeEEEccCcEEEEEccCcCCCcCCccchhHHHHHHHHHHHHHHHHHHHHHhhcCccc------------------
Confidence 47899999999999999999999999999876667789999999999999999998876642
Q ss_pred eeeeeecCCCCcCCCCcccccccccceeheeeecCCeeEEEeCCCCCccceeccceeecCCCcCCCCCcCCchhHHHHHH
Q psy16411 81 VGHVFRKSTPYTFPGGTSNIVNHNNARLAEVWQCGGILEIIPCSHVGHVFRDKSPYTYLNPLGAASVDVGDVSERKELRE 160 (214)
Q Consensus 81 v~h~~r~~~P~~~p~~~g~~~~~n~~r~aevW~~~~~l~l~pC~~~~~~~~~k~~~~~~~p~~~~~~~~gdit~r~~LR~ 160 (214)
+.+++||+++|++||+
T Consensus 334 ----------------------------------------------------------------~~~~~g~~~~r~~lr~ 349 (501)
T 2ffu_A 334 ----------------------------------------------------------------RNVPYGNIQSRLELRK 349 (501)
T ss_dssp ----------------------------------------------------------------GGCCCCCCHHHHHHHH
T ss_pred ----------------------------------------------------------------ccCCccchHHHHHHHH
Confidence 3347899999999999
Q ss_pred HccCCcchhhcccCCCCCCCCccc-cccceEEeCCCCCcccccCCCCCCceeec
Q psy16411 161 RLQCKSFRWYLENVYPESQMPLDY-YYLGEVKNAETLNCLDTMGRKTGEKVVIP 213 (214)
Q Consensus 161 ~l~CksF~Wyl~nV~p~~~~p~~~-~~~G~i~n~~s~~CLd~~~~~~g~~~~~~ 213 (214)
+|+||+|+|||+||||++.+|.+. .+.|+|+| +++|||+.+..++..|+++
T Consensus 350 ~l~c~~f~w~l~~v~p~~~~p~~~~~~~g~i~~--~~~Cld~~~~~~~~~v~l~ 401 (501)
T 2ffu_A 350 KLSCKPFKWYLENVYPELRVPDHQDIAFGALQQ--GTNCLDTLGHFADGVVGVY 401 (501)
T ss_dssp HTTCCCHHHHHHHTCTTSCCCCCCCCCEEEEEE--TTEEEECTTCCTTCCCEEE
T ss_pred hcCCCCeEEehhccccccccccccccccccccc--cCccccccCCCCCCEEEEE
Confidence 999999999999999999988753 57899998 7999999887777777764
No 2
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=99.94 E-value=4.2e-28 Score=222.45 Aligned_cols=131 Identities=60% Similarity=1.186 Sum_probs=106.8
Q ss_pred CeeecceeEEecccceeeeccCCCCCCCCCCchhhhhhhhHHHHHHhhhhhhhhhhhcCCCcccceeecCccEEEeeccc
Q psy16411 1 VWQCGGILEIIPCSHVGHVFRDKSPYTFPGGVSKIVLHNAARVAEVWMDEWRDFYYAMNPGKSASVWMCGGVLEIATCSH 80 (214)
Q Consensus 1 ~W~CGG~~~~~PcsrVgh~~r~~~py~~p~~~~~~~~~N~~R~A~vWmDe~~~~~y~~n~els~r~w~cGg~~e~~~Cs~ 80 (214)
+|+||++++++||++|+|++++.+||..|.+....+.+|.+|++++|||+|+++||..+|++
T Consensus 240 ~~~~G~~i~~~p~~~v~H~~~~~~~~~~~~~~~~~~~~n~~r~~~~W~d~~~~~~~~~~p~~------------------ 301 (472)
T 1xhb_A 240 IWQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGV------------------ 301 (472)
T ss_dssp HHHTTCEEEEEEEEEEEEEC------------CHHHHHHHHHHHHHHCGGGGHHHHHTSTTG------------------
T ss_pred HHhcCCeEEEccCcEEEEEccCcCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHHhhCccc------------------
Confidence 47899999999999999999999999988765567899999999999999999998877653
Q ss_pred eeeeeecCCCCcCCCCcccccccccceeheeeecCCeeEEEeCCCCCccceeccceeecCCCcCCCCCcCCchhHHHHHH
Q psy16411 81 VGHVFRKSTPYTFPGGTSNIVNHNNARLAEVWQCGGILEIIPCSHVGHVFRDKSPYTYLNPLGAASVDVGDVSERKELRE 160 (214)
Q Consensus 81 v~h~~r~~~P~~~p~~~g~~~~~n~~r~aevW~~~~~l~l~pC~~~~~~~~~k~~~~~~~p~~~~~~~~gdit~r~~LR~ 160 (214)
+.+++|++++|++||+
T Consensus 302 ----------------------------------------------------------------~~~~~g~~~~~~~lr~ 317 (472)
T 1xhb_A 302 ----------------------------------------------------------------TKVDYGDISSRLGLRR 317 (472)
T ss_dssp ----------------------------------------------------------------GGSCCCCCHHHHHHHH
T ss_pred ----------------------------------------------------------------ccCCCCCHHHHHHHHH
Confidence 2347899999999999
Q ss_pred HccCCcchhhcccCCCCCCCCccccccceEEeCCCCCcccccCCCCCCceeec
Q psy16411 161 RLQCKSFRWYLENVYPESQMPLDYYYLGEVKNAETLNCLDTMGRKTGEKVVIP 213 (214)
Q Consensus 161 ~l~CksF~Wyl~nV~p~~~~p~~~~~~G~i~n~~s~~CLd~~~~~~g~~~~~~ 213 (214)
+|+||+|+|||++||||+.+|.+..+.|+|+|.++++|||+.+...|..|+++
T Consensus 318 ~l~~~~f~w~l~~v~p~~~~p~~~~~~g~i~~~~~~~Cld~~~~~~g~~v~l~ 370 (472)
T 1xhb_A 318 KLQCKPFSWYLENIYPDSQIPRHYFSLGEIRNVETNQCLDNMARKENEKVGIF 370 (472)
T ss_dssp HTTCCCHHHHHHHTCTTCSSCSSEEEEECEEETTTCEEEECTTCCTTEECEEE
T ss_pred hcCCCCccchhhhhhhhhcccccccccceEEECCCCccccccCCCCCCeEEEE
Confidence 99999999999999999998876668899999999999999887778777764
No 3
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=99.94 E-value=4.3e-27 Score=222.40 Aligned_cols=129 Identities=40% Similarity=0.785 Sum_probs=112.2
Q ss_pred CeeecceeEEecccceeeeccCCCCCCCCCCchhhhhhhhHHHHHHhhhhhhhhhhhcCCCcccceeecCccEEEeeccc
Q psy16411 1 VWQCGGILEIIPCSHVGHVFRDKSPYTFPGGVSKIVLHNAARVAEVWMDEWRDFYYAMNPGKSASVWMCGGVLEIATCSH 80 (214)
Q Consensus 1 ~W~CGG~~~~~PcsrVgh~~r~~~py~~p~~~~~~~~~N~~R~A~vWmDe~~~~~y~~n~els~r~w~cGg~~e~~~Cs~ 80 (214)
+|+||++|+++|||+|+|++|..+||+.|.+ ..+.+|.+|++++|||+|+.++|..+|+.
T Consensus 320 l~~~G~~i~~~p~~~v~H~~r~~~~~~~~~~--~~~~~n~~r~~~~W~d~~~~~~y~~~p~~------------------ 379 (570)
T 2d7i_A 320 VWMCGGRMEDIPCSRVGHIYRKYVPYKVPAG--VSLARNLKRVAEVWMDEYAEYIYQRRPEY------------------ 379 (570)
T ss_dssp HHHTTCEEEEEEEEEEEECCCSSCCSCCCSS--CCHHHHHHHHHHHHCGGGHHHHHTTCGGG------------------
T ss_pred HHhCCCeEEEccCeEEEEEccccCCCCCCch--hhhHHHHHHHHHHHHHHHHHHHHhcCccc------------------
Confidence 4899999999999999999999999998865 46889999999999999999998876642
Q ss_pred eeeeeecCCCCcCCCCcccccccccceeheeeecCCeeEEEeCCCCCccceeccceeecCCCcCCCCCcCCchhHHHHHH
Q psy16411 81 VGHVFRKSTPYTFPGGTSNIVNHNNARLAEVWQCGGILEIIPCSHVGHVFRDKSPYTYLNPLGAASVDVGDVSERKELRE 160 (214)
Q Consensus 81 v~h~~r~~~P~~~p~~~g~~~~~n~~r~aevW~~~~~l~l~pC~~~~~~~~~k~~~~~~~p~~~~~~~~gdit~r~~LR~ 160 (214)
+.+++||+++|++||+
T Consensus 380 ----------------------------------------------------------------~~~~~g~~~~r~~lr~ 395 (570)
T 2d7i_A 380 ----------------------------------------------------------------RHLSAGDVAVQKKLRS 395 (570)
T ss_dssp ----------------------------------------------------------------TTSCCCCCHHHHHHHH
T ss_pred ----------------------------------------------------------------ccCCccchHHHHHHHH
Confidence 2357899999999999
Q ss_pred HccCCcchhhcccCCCCCC---CCc--cccccceEEeCCCCCcccccCCCCCCceeec
Q psy16411 161 RLQCKSFRWYLENVYPESQ---MPL--DYYYLGEVKNAETLNCLDTMGRKTGEKVVIP 213 (214)
Q Consensus 161 ~l~CksF~Wyl~nV~p~~~---~p~--~~~~~G~i~n~~s~~CLd~~~~~~g~~~~~~ 213 (214)
+|+||+|+|||+|||||+. +|. ...+.|+|+|.++++|||+.+...|.+|+++
T Consensus 396 ~l~ck~f~wyl~~v~~~~~~~~p~~~~~~~~~G~irn~~s~~CLD~~~~~~g~~v~l~ 453 (570)
T 2d7i_A 396 SLNCKSFKWFMTKIAWDLPKFYPPVEPPAAAWGEIRNVGTGLCADTKHGALGSPLRLE 453 (570)
T ss_dssp HHTCCCHHHHHHHTSTTHHHHSCSSCCCCSEEEEEEETTTCCEECCCSCTTTCCCCEE
T ss_pred HcCCCCcHHHHHHhhhhcccccCcccccccccceeeecccCccccccCCCCCCeEEEE
Confidence 9999999999999999973 332 2357899999999999999987778887764
No 4
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*
Probab=99.40 E-value=6.4e-15 Score=140.70 Aligned_cols=90 Identities=14% Similarity=0.077 Sum_probs=74.6
Q ss_pred cccceeheeeecCCeeEEEeCCCCCccceeccceeecCCCcCCCCCcCCchhHHHHHHHc-cCCcchhhcccCCCCCCCC
Q psy16411 103 HNNARLAEVWQCGGILEIIPCSHVGHVFRDKSPYTYLNPLGAASVDVGDVSERKELRERL-QCKSFRWYLENVYPESQMP 181 (214)
Q Consensus 103 ~n~~r~aevW~~~~~l~l~pC~~~~~~~~~k~~~~~~~p~~~~~~~~gdit~r~~LR~~l-~CksF~Wyl~nV~p~~~~p 181 (214)
+|..|+||||||+ |+.+||.. | ..+.++|++++|++||++| +||+|+||++++||++.+|
T Consensus 423 ~N~~R~aeVwmD~----------------~k~~~~~~-P--~~~~~~gdvs~~~~Lr~~l~ncksF~wy~~~~~P~~~~~ 483 (614)
T 3a21_A 423 TSSARTATLQVNG----------------QTATTVSF-P--PTGASAGTVSVEVSLSKGSANTLALSGGPATEGITVRPL 483 (614)
T ss_dssp SSSCEEEEEEETT----------------SCCEEEEE-C--CCCSSCEEEEEEEEECSEEEEEEEEESSSCEEEEEEEEC
T ss_pred CCCCceEEEEECC----------------ceeEEEec-C--CCCCCccceeEEEecccCCcceeeecccccccCceeecc
Confidence 6889999999999 67777764 5 4467999999999999996 9999999999999998655
Q ss_pred cccccc-ceEEeCCCCCcccccCCC--CCCceeec
Q psy16411 182 LDYYYL-GEVKNAETLNCLDTMGRK--TGEKVVIP 213 (214)
Q Consensus 182 ~~~~~~-G~i~n~~s~~CLd~~~~~--~g~~~~~~ 213 (214)
. ... |+|+|.++++|||..+.+ +|..|+++
T Consensus 484 ~--~~~~g~i~n~~sg~CLDv~~~~~~~g~~v~l~ 516 (614)
T 3a21_A 484 P--GTNGALVTGKQSGRCADIYNNTITNGTQAELW 516 (614)
T ss_dssp G--GGCBBCCEETTTCCEEECGGGCCCTTCBCEEE
T ss_pred C--CCceEEEEECCCCcEEEeCCCCCCCCCEEEEE
Confidence 3 234 899999999999997653 46777654
No 5
>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*
Probab=98.88 E-value=4.1e-11 Score=114.44 Aligned_cols=153 Identities=13% Similarity=0.047 Sum_probs=95.2
Q ss_pred hhhHHHHHHhhhhhhhhhhhcCCCcccceeecCc------cEEEe-eccceeeeeecCCCCcCC--CCc-ccccccc-cc
Q psy16411 38 HNAARVAEVWMDEWRDFYYAMNPGKSASVWMCGG------VLEIA-TCSHVGHVFRKSTPYTFP--GGT-SNIVNHN-NA 106 (214)
Q Consensus 38 ~N~~R~A~vWmDe~~~~~y~~n~els~r~w~cGg------~~e~~-~Cs~v~h~~r~~~P~~~p--~~~-g~~~~~n-~~ 106 (214)
+|..|+||||||||+.++|.. |.. ....|+ +++.+ +|++|.|++++++|...| ... +.|+|.+ ++
T Consensus 423 ~N~~R~aeVwmD~~k~~~~~~-P~~---~~~~gdvs~~~~Lr~~l~ncksF~wy~~~~~P~~~~~~~~~~g~i~n~~sg~ 498 (614)
T 3a21_A 423 TSSARTATLQVNGQTATTVSF-PPT---GASAGTVSVEVSLSKGSANTLALSGGPATEGITVRPLPGTNGALVTGKQSGR 498 (614)
T ss_dssp SSSCEEEEEEETTSCCEEEEE-CCC---CSSCEEEEEEEEECSEEEEEEEEESSSCEEEEEEEECGGGCBBCCEETTTCC
T ss_pred CCCCceEEEEECCceeEEEec-CCC---CCCccceeEEEecccCCcceeeecccccccCceeeccCCCceEEEEECCCCc
Confidence 699999999999999988863 522 223555 56775 999999999998886433 344 7888865 67
Q ss_pred eeheee---ecCCeeEEEeCCCCCccceeccceeecCCCcCCCCCcCCchhHHHHHHHccCCcchhhcc-cCCCCCCCCc
Q psy16411 107 RLAEVW---QCGGILEIIPCSHVGHVFRDKSPYTYLNPLGAASVDVGDVSERKELRERLQCKSFRWYLE-NVYPESQMPL 182 (214)
Q Consensus 107 r~aevW---~~~~~l~l~pC~~~~~~~~~k~~~~~~~p~~~~~~~~gdit~r~~LR~~l~CksF~Wyl~-nV~p~~~~p~ 182 (214)
|++-.. .++..+.+++||+ +.+|.|... + -|.|... .-.|.+...--. +-.+....++
T Consensus 499 CLDv~~~~~~~g~~v~l~~C~g-~~nQ~w~~~-----~-------~g~ir~~-----~~~CLdv~~~~~~~G~~V~l~~C 560 (614)
T 3a21_A 499 CADIYNNTITNGTQAELWDCNG-GPNQSWTYT-----S-------RKELVLY-----GNKCLDAYNLGTTNGTKVVIWDC 560 (614)
T ss_dssp EEECGGGCCCTTCBCEEECCCC-CGGGCBEEC-----T-------TSCEEET-----TTEEEEEGGGCCSTTCBEEEEEC
T ss_pred EEEeCCCCCCCCCEEEEECCCC-CCCceEEEE-----C-------CceEEEC-----CCcEEECCCCcCCCCceEEEeCC
Confidence 765432 2355899999998 467776320 0 1222210 125766542110 0011111111
Q ss_pred -----cc---cccceEEeCCCCCcccccCC--CCCCceee
Q psy16411 183 -----DY---YYLGEVKNAETLNCLDTMGR--KTGEKVVI 212 (214)
Q Consensus 183 -----~~---~~~G~i~n~~s~~CLd~~~~--~~g~~~~~ 212 (214)
+. ...|.|+|..+++|||..+. .+|..|.+
T Consensus 561 ~g~~nQ~W~~~~~g~i~~~~sg~CLdv~~~st~~g~~v~~ 600 (614)
T 3a21_A 561 NGQANQKWNINSDGTITNVNAGLCLDAYNAATANGTSLVL 600 (614)
T ss_dssp CCCGGGCEEECTTSCEEETTTCCEEEEGGGCCSTTCBEEE
T ss_pred CCCCccEEEEcCCCeEEECCCCceEecCCCCCCCCCEEEE
Confidence 11 23489999999999998754 34566654
No 6
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=98.48 E-value=4.8e-09 Score=95.68 Aligned_cols=120 Identities=14% Similarity=0.140 Sum_probs=77.6
Q ss_pred cEEEeeccceeeeeecCCCC-cCC---CCcccccccc-cceeheee-ecCCeeEEEeCCCCCccceeccceeecCCCcCC
Q psy16411 72 VLEIATCSHVGHVFRKSTPY-TFP---GGTSNIVNHN-NARLAEVW-QCGGILEIIPCSHVGHVFRDKSPYTYLNPLGAA 145 (214)
Q Consensus 72 ~~e~~~Cs~v~h~~r~~~P~-~~p---~~~g~~~~~n-~~r~aevW-~~~~~l~l~pC~~~~~~~~~k~~~~~~~p~~~~ 145 (214)
+++.+.|++|.||+++++|. ..| .++|+++|.+ ++|++-.. .++..+.+++||+.+++|.|.. .
T Consensus 315 lr~~l~~~~f~w~l~~v~p~~~~p~~~~~~g~i~~~~~~~Cld~~~~~~g~~v~l~~C~~~~~nQ~w~~---~------- 384 (472)
T 1xhb_A 315 LRRKLQCKPFSWYLENIYPDSQIPRHYFSLGEIRNVETNQCLDNMARKENEKVGIFNCHGMGGNQVFSY---T------- 384 (472)
T ss_dssp HHHHTTCCCHHHHHHHTCTTCSSCSSEEEEECEEETTTCEEEECTTCCTTEECEEEECCSCCGGGCEEE---E-------
T ss_pred HHHhcCCCCccchhhhhhhhhcccccccccceEEECCCCccccccCCCCCCeEEEEeCCCCCcceeEEE---c-------
Confidence 56788999999999999995 445 3568888855 67776443 3455899999999888888732 1
Q ss_pred CCCcCCchhHHHHHHHccCCcchhhcccCCCCCCCCc------cc---cc-cceEEeCCCCCcccccCCCCCCceee
Q psy16411 146 SVDVGDVSERKELRERLQCKSFRWYLENVYPESQMPL------DY---YY-LGEVKNAETLNCLDTMGRKTGEKVVI 212 (214)
Q Consensus 146 ~~~~gdit~r~~LR~~l~CksF~Wyl~nV~p~~~~p~------~~---~~-~G~i~n~~s~~CLd~~~~~~g~~~~~ 212 (214)
.-|.| |..-.|.+.. .+-.+....++ +. .. .|+|+|..+|+|||..+..+|..|.+
T Consensus 385 --~~g~i------~~~~~Cld~~---~~g~~v~l~~C~~~~~~Q~W~~~~~~g~i~~~~sg~CLd~~~~~~~~~~~~ 450 (472)
T 1xhb_A 385 --ANKEI------RTDDLCLDVS---KLNGPVTMLKCHHLKGNQLWEYDPVKLTLQHVNSNQCLDKATEEDSQVPSI 450 (472)
T ss_dssp --TTSCE------EETTEEEECC---STTCCCEEEECCTTCGGGCEEEETTTTEEEESSSCEEEESCCSSSTTSCEE
T ss_pred --cccee------eecceEEeec---CCCceEEEEeCCCCCcCceEEEeCCCCeEEeCCCCeeEccccCCCCCeEEE
Confidence 11222 2223576654 11111111122 11 12 58999999999999876555666654
No 7
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=98.39 E-value=1.1e-08 Score=94.45 Aligned_cols=120 Identities=10% Similarity=0.112 Sum_probs=74.6
Q ss_pred cEEEeeccceeeeeecCCCC-cCC----CCcccccccccceeheeee-cCCeeEEEeCCCCCccceeccceeecCCCcCC
Q psy16411 72 VLEIATCSHVGHVFRKSTPY-TFP----GGTSNIVNHNNARLAEVWQ-CGGILEIIPCSHVGHVFRDKSPYTYLNPLGAA 145 (214)
Q Consensus 72 ~~e~~~Cs~v~h~~r~~~P~-~~p----~~~g~~~~~n~~r~aevW~-~~~~l~l~pC~~~~~~~~~k~~~~~~~p~~~~ 145 (214)
+++.++|++|.||+++++|. ..| ..+|++.+ .++|++..-. .++.+.+++||+.+++|.|..
T Consensus 347 lr~~l~c~~f~w~l~~v~p~~~~p~~~~~~~g~i~~-~~~Cld~~~~~~~~~v~l~~C~g~~~nQ~w~~----------- 414 (501)
T 2ffu_A 347 LRKKLSCKPFKWYLENVYPELRVPDHQDIAFGALQQ-GTNCLDTLGHFADGVVGVYECHNAGGNQEWAL----------- 414 (501)
T ss_dssp HHHHTTCCCHHHHHHHTCTTSCCCCCCCCCEEEEEE-TTEEEECTTCCTTCCCEEEECCSSCGGGCEEE-----------
T ss_pred HHHhcCCCCeEEehhccccccccccccccccccccc-cCccccccCCCCCCEEEEEEcCCCCcceEEEE-----------
Confidence 56789999999999999995 334 35688887 5677765433 345799999999988888732
Q ss_pred CCCcCCchhHHHHHHHccCCcchhhcccCCCCCCCCcc------c---cc-cceEEeCCCCCcccccCCCCCCceee
Q psy16411 146 SVDVGDVSERKELRERLQCKSFRWYLENVYPESQMPLD------Y---YY-LGEVKNAETLNCLDTMGRKTGEKVVI 212 (214)
Q Consensus 146 ~~~~gdit~r~~LR~~l~CksF~Wyl~nV~p~~~~p~~------~---~~-~G~i~n~~s~~CLd~~~~~~g~~~~~ 212 (214)
|...+||..-.|.+..-. .+-.+....+++ . .. .|.|+|..||+|||.. ..++..|.+
T Consensus 415 -------~~~g~i~~~~~Cld~~~~-~~g~~v~l~~C~~~~~~Q~W~~~~~~~~i~~~~sg~CLd~~-~~~~~~~~~ 482 (501)
T 2ffu_A 415 -------TKEKSVKHMDLCLTVVDR-APGSLIKLQGCRENDSRQKWEQIEGNSKLRHVGSNLCLDSR-TAKSGGLSV 482 (501)
T ss_dssp -------CTTSCEEETTEEEECSCC-STTCBCEEEECCTTCGGGCEEEETTTTEEEETTSSEEEECT-TGGGTSCEE
T ss_pred -------ecCCceeeccccceeccC-CCCCeEEEEecCCCCcCceEEEECCCCeEEeCCCCeEEeee-cCCCCeEEE
Confidence 111223333467765410 011111112221 1 12 5799999999999976 223444443
No 8
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=97.53 E-value=3.2e-06 Score=79.53 Aligned_cols=67 Identities=39% Similarity=0.675 Sum_probs=59.2
Q ss_pred hhhhhhhhhhhcCCCcccceeecCccEEEeeccceeeeeecCCCCcCCCCcccccccccceeheeeecC
Q psy16411 47 WMDEWRDFYYAMNPGKSASVWMCGGVLEIATCSHVGHVFRKSTPYTFPGGTSNIVNHNNARLAEVWQCG 115 (214)
Q Consensus 47 WmDe~~~~~y~~n~els~r~w~cGg~~e~~~Cs~v~h~~r~~~P~~~p~~~g~~~~~n~~r~aevW~~~ 115 (214)
.+||....++.++.|+++|+|++|+.++.+||+.|.|+++...||..|.. ....+|..|++++|+++
T Consensus 301 gfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~~~~~~~~~~--~~~~~n~~r~~~~W~d~ 367 (570)
T 2d7i_A 301 GYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAG--VSLARNLKRVAEVWMDE 367 (570)
T ss_dssp SSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCSSCCSCCCSS--CCHHHHHHHHHHHHCGG
T ss_pred CCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEccccCCCCCCch--hhhHHHHHHHHHHHHHH
Confidence 57776666668999999999999999999999999999999889887753 66778999999999999
No 9
>1abr_B Abrin-A; glycosidase/carbohydrate complex, lectin, lectin (agglutinin), glycoprotein, plant SEED protein, plant toxin; HET: NDG NGZ MAN BMA BGC; 2.14A {Abrus precatorius} SCOP: b.42.2.1 b.42.2.1 PDB: 2zr1_B* 2q3n_B*
Probab=96.19 E-value=0.0012 Score=55.87 Aligned_cols=100 Identities=12% Similarity=0.105 Sum_probs=58.5
Q ss_pred CCcccccccccceeheee---ecCCeeEEEeC-CCCCccceeccceeecCCCcCCCCCcCCchhHHHHHHHccCCcchhh
Q psy16411 95 GGTSNIVNHNNARLAEVW---QCGGILEIIPC-SHVGHVFRDKSPYTYLNPLGAASVDVGDVSERKELRERLQCKSFRWY 170 (214)
Q Consensus 95 ~~~g~~~~~n~~r~aevW---~~~~~l~l~pC-~~~~~~~~~k~~~~~~~p~~~~~~~~gdit~r~~LR~~l~CksF~Wy 170 (214)
+..+.|++..++||+-.- .++..|.+++| |+.+.+|.|... .-|. ||..-.|.+..-
T Consensus 13 ~~~~~i~~~sg~CLDv~~~~~~~g~~v~~~~c~~~~~~~Q~w~~~------------~~g~------ir~~g~CLdv~g- 73 (267)
T 1abr_B 13 EPTVRIGGRDGMCVDVYDNGYHNGNRIIMWKCKDRLEENQLWTLK------------SDKT------IRSNGKCLTTYG- 73 (267)
T ss_dssp CCEECEECGGGCEEEEGGGCCSTTCBEEEECCCSSCCGGGCEEEC------------TTSB------EEETTEEEEESC-
T ss_pred CCeEEEEcCCCCEEECCCCCCCCCcEEEEEecCCCCChhcEEEEc------------cCce------EEECCEEEcccC-
Confidence 446678888778876442 23558999999 667788877320 1122 222235766542
Q ss_pred cccC-----CCCCCC--Cccc---cccceEEeCCCCCcccccCCCCCCceeec
Q psy16411 171 LENV-----YPESQM--PLDY---YYLGEVKNAETLNCLDTMGRKTGEKVVIP 213 (214)
Q Consensus 171 l~nV-----~p~~~~--p~~~---~~~G~i~n~~s~~CLd~~~~~~g~~~~~~ 213 (214)
-.+- ++-... +.+. ...|.|+|..+++|||..+...|..|.+.
T Consensus 74 ~~~g~~v~~~~c~~~~~~~Q~W~~~~~G~i~n~~sg~cLd~~~~~~g~~v~~~ 126 (267)
T 1abr_B 74 YAPGSYVMIYDCTSAVAEATYWEIWDNGTIINPKSALVLSAESSSMGGTLTVQ 126 (267)
T ss_dssp SSTTCBEEEECTTTSCGGGSBCEECTTSCEEETTTTEEEECCCSSTTCBCEEE
T ss_pred CCCCCEEEEEeCCCCCCccCEEEEecCCcEEeCCCCcEEeccCCCCCcEEEEE
Confidence 1111 111111 1111 23589999999999999877667666653
No 10
>1knl_A Endo-1,4-beta-xylanase A; carbohydrate binding module, CBM13 xylan binding domain, LEC ricin B-like, beta-trefoil fold, hydrolase; 1.20A {Streptomyces lividans} SCOP: b.42.2.1 PDB: 1knm_A* 1mc9_A*
Probab=95.27 E-value=0.0026 Score=47.55 Aligned_cols=100 Identities=17% Similarity=0.151 Sum_probs=53.4
Q ss_pred CCCcccccccc-cceeheeee---cCCeeEEEeCCCCCccceeccceeecCCCcCCCCCcCCchhHHHHHHHccCCcchh
Q psy16411 94 PGGTSNIVNHN-NARLAEVWQ---CGGILEIIPCSHVGHVFRDKSPYTYLNPLGAASVDVGDVSERKELRERLQCKSFRW 169 (214)
Q Consensus 94 p~~~g~~~~~n-~~r~aevW~---~~~~l~l~pC~~~~~~~~~k~~~~~~~p~~~~~~~~gdit~r~~LR~~l~CksF~W 169 (214)
|.+.|.|+|.+ ++|++-.-. ++..|.+++|++. .+|.|... ..|+|. ...-.|.+..
T Consensus 3 p~~~g~i~n~~sg~cld~~~~~~~~g~~v~~~~c~~~-~~Q~w~~~------------~~g~i~-----~~s~~CLd~~- 63 (130)
T 1knl_A 3 PADGGQIKGVGSGRCLDVPDASTSDGTQLQLWDCHSG-TNQQWAAT------------DAGELR-----VYGDKCLDAA- 63 (130)
T ss_dssp --CCBCCEETTTCCEEECGGGCCCTTCBCEEECCCSC-GGGCBEEC------------TTSCEE-----ETTTEEEEES-
T ss_pred CCceeEEEECCCCCEEECCCCCCCCCCEEEEEecCCC-cccEEEEe------------CCCcEE-----ECCCcEEeCC-
Confidence 56788999965 666653321 3458999999984 67777321 113332 0122465541
Q ss_pred hcccCCCCCCCCc-----cc---cccceEEeCCCCCcccccCC--CCCCceee
Q psy16411 170 YLENVYPESQMPL-----DY---YYLGEVKNAETLNCLDTMGR--KTGEKVVI 212 (214)
Q Consensus 170 yl~nV~p~~~~p~-----~~---~~~G~i~n~~s~~CLd~~~~--~~g~~~~~ 212 (214)
-..+-.+....++ +. ...|.|+|..+++|||..+. ..|..|.+
T Consensus 64 ~~~~g~~v~~~~c~~~~~Q~W~~~~~g~i~~~~sg~cLdv~~~~~~~g~~v~~ 116 (130)
T 1knl_A 64 GTSNGSKVQIYSCWGGDNQKWRLNSDGSVVGVQSGLCLDAVGNGTANGTLIQL 116 (130)
T ss_dssp CSSTTCBEEEEECCCCGGGCEEECTTSCEEETTTCCEEEEGGGCCSTTCBEEE
T ss_pred CCCCCCEEEEEecCCCCcceEEECCCCeEEECCCCceEECCCCCCCCCCEEEE
Confidence 0001001011111 11 12489999999999998754 34566654
No 11
>1m2t_B Mistletoe lectin I B chain; ribosome inactivation, ribosome inhibitor, hydrolase; HET: NAG FUC ADE; 1.89A {Viscum album} SCOP: b.42.2.1 b.42.2.1 PDB: 2r9k_B* 3d7w_B* 3cef_B* 1sz6_B* 1pum_B* 1puu_B* 2rg9_B* 3o5w_B* 1onk_B* 1oql_B* 1tfm_B* 1pc8_B* 1yf8_B* 1ce7_B* 2mll_B*
Probab=94.74 E-value=0.0063 Score=51.33 Aligned_cols=101 Identities=13% Similarity=0.108 Sum_probs=56.5
Q ss_pred CCCcccccccccceeheee---ecCCeeEEEeCC-CCCccceeccceeecCCCcCCCCCcCCchhHHHHHHHccCCcchh
Q psy16411 94 PGGTSNIVNHNNARLAEVW---QCGGILEIIPCS-HVGHVFRDKSPYTYLNPLGAASVDVGDVSERKELRERLQCKSFRW 169 (214)
Q Consensus 94 p~~~g~~~~~n~~r~aevW---~~~~~l~l~pC~-~~~~~~~~k~~~~~~~p~~~~~~~~gdit~r~~LR~~l~CksF~W 169 (214)
|+..+.|++..++||+-.- .++..+.+++|+ +.+.+|.|... .-|.|.. .-.|.+...
T Consensus 8 ~~~~~~i~~~sg~ClDv~~~~~~~g~~v~~~~c~~~~~~~Q~w~~~------------~~g~ir~------~g~CLdv~~ 69 (263)
T 1m2t_B 8 SEPIVRIVGRNGMTVDVRDDDFHDGNQIQLWPSKSNNDPNQLWTIK------------KDGTIRS------NGSCLTTYG 69 (263)
T ss_dssp CCCEECEECGGGCEEEEGGGCCSTTCBEEEECCCCSCCGGGCEEEC------------TTSCEEE------TTEEEEESC
T ss_pred CCCeEEEEcCCCCEEECCCCCCCCCCEEEEeeCCCCCChhceeEEC------------CCCeEEE------ccEEEcccc
Confidence 4455678887777776432 234589999996 45677777320 1122221 125666521
Q ss_pred hccc---C--CCCCC--CCccc---cccceEEeCCCCCcccccCCCCCCceeec
Q psy16411 170 YLEN---V--YPESQ--MPLDY---YYLGEVKNAETLNCLDTMGRKTGEKVVIP 213 (214)
Q Consensus 170 yl~n---V--~p~~~--~p~~~---~~~G~i~n~~s~~CLd~~~~~~g~~~~~~ 213 (214)
. .+ | ++--. -+.+. ...|.|+|..+++|||..+...+..|.+.
T Consensus 70 ~-~~g~~v~~~~c~~~~~~~Q~W~~~~~g~i~n~~sg~cLd~~~~~~g~~v~~~ 122 (263)
T 1m2t_B 70 Y-TAGVYVMIFDCNTAVREATIWQIWGNGTIINPRSNLVLAASSGIKGTTLTVQ 122 (263)
T ss_dssp S-STTCBEEEEETTTSCGGGGCCEECTTSCEEETTTTEEEECSSCSTTCBCEEE
T ss_pred c-CCCCEEEEEeCCCCCCcccEEEECCCCCEEeCCCCceEccCCCCccceEEEe
Confidence 0 11 0 11101 01111 23589999999999999866666666653
No 12
>3c9z_A Agglutinin II, SNA-II; beta-trefoil, ricin-B domain, glycosylation, glycoprotein, L sugar binding protein, plant protein; HET: NAG FUC SO4; 1.35A {Sambucus nigra} PDB: 3ca0_A* 3ca1_A* 3ca3_A* 3ca4_A* 3ca5_A* 3ca6_A* 3cah_A* 1hwm_B* 1hwn_B* 1hwo_B* 1hwp_B*
Probab=94.62 E-value=0.0037 Score=52.52 Aligned_cols=97 Identities=16% Similarity=0.118 Sum_probs=55.0
Q ss_pred Ccccccccccceeheee---ecCCeeEEEeCCCCCccceeccceeecCCCcCCCCCcCCchhHHHHHHHccCCcchhhcc
Q psy16411 96 GTSNIVNHNNARLAEVW---QCGGILEIIPCSHVGHVFRDKSPYTYLNPLGAASVDVGDVSERKELRERLQCKSFRWYLE 172 (214)
Q Consensus 96 ~~g~~~~~n~~r~aevW---~~~~~l~l~pC~~~~~~~~~k~~~~~~~p~~~~~~~~gdit~r~~LR~~l~CksF~Wyl~ 172 (214)
+...|++..++||+-.- .++..|.+++|++. .+|.|... ..|.| |..-.|.+..- -.
T Consensus 3 ~~~~i~~~sg~cldv~~~~~~~g~~v~~~~c~~~-~~Q~w~~~------------~~g~i------r~~g~CLd~~g-~~ 62 (258)
T 3c9z_A 3 FTRNIVGRDGLCVDVRNGYDTDGTPLQLWPCGTQ-RNQRWTFD------------SDDTI------RSMGKCMTANG-LN 62 (258)
T ss_dssp EEEEEECGGGCEEEEGGGCCSTTCBEEEECCCCC-GGGCEEEC------------TTSCE------EETTEEEEEES-SS
T ss_pred ceEEEECCCCCeEECCCCCCCCCcEEEEECCCCC-hhccEEEc------------CCCeE------EECCeEEcccC-CC
Confidence 34456777677776443 23558999999865 66776321 11332 22235766542 01
Q ss_pred c---C--CCCCCC--Cccc---cccceEEeCCCCCcccccCCCCCCceee
Q psy16411 173 N---V--YPESQM--PLDY---YYLGEVKNAETLNCLDTMGRKTGEKVVI 212 (214)
Q Consensus 173 n---V--~p~~~~--p~~~---~~~G~i~n~~s~~CLd~~~~~~g~~~~~ 212 (214)
+ | ++-... +.+. ...|.|+|..+++|||..+...|..|.+
T Consensus 63 ~g~~v~~~~c~~~~~~~Q~W~~~~~g~i~n~~sg~cLd~~~~~~g~~v~~ 112 (258)
T 3c9z_A 63 NGSNIVIFNCSTAAENAIKWEVPIDGSIINPSSGLVMTAPRAASRTILLL 112 (258)
T ss_dssp TTCEEEEECTTTSCGGGSCCBCCTTSCCBCTTTCCEEECSSSSTTCBCEE
T ss_pred CCCEEEEEeCCCCCCcCCEEEEcCCCeEEECCCCcEEecCCCCCCcceEE
Confidence 1 1 111111 1111 1348999999999999987666766655
No 13
>1ggp_B TKL-1, protein (lectin 1 B chain); sugar binding protein; 2.70A {Trichosanthes kirilowii} SCOP: b.42.2.1 b.42.2.1
Probab=93.07 E-value=0.012 Score=49.36 Aligned_cols=95 Identities=13% Similarity=0.042 Sum_probs=50.8
Q ss_pred ccccccccceeheeee---cCCeeEEEeCCCCCccceeccceeecCCCcCCCCCcCCchhHHHHHHHccCCcchhh-ccc
Q psy16411 98 SNIVNHNNARLAEVWQ---CGGILEIIPCSHVGHVFRDKSPYTYLNPLGAASVDVGDVSERKELRERLQCKSFRWY-LEN 173 (214)
Q Consensus 98 g~~~~~n~~r~aevW~---~~~~l~l~pC~~~~~~~~~k~~~~~~~p~~~~~~~~gdit~r~~LR~~l~CksF~Wy-l~n 173 (214)
..|++..++||+ |-. ++..+.+++|++. .+|.|.. . .-|.| |..-.|.+.... -..
T Consensus 6 ~~i~~~sg~ClD-v~~~~~~g~~v~~~~c~g~-~nQ~w~~---~---------~~g~i------r~~g~CLdv~g~~g~~ 65 (254)
T 1ggp_B 6 VRIAGRDGFCAD-VNGEGQNGAAIILKKCAEN-DNQLWTL---K---------REATI------RSNGGCLTTAAAEQAK 65 (254)
T ss_dssp EEEECGGGEEEE-ESSSCCSSCBEEEEECCCC-TTTEEEE---E---------TTSCC------BSSSSEEEEECSSSCE
T ss_pred EEEECCCCceEe-CCCCcCCCcEEEEEcCCCC-ccceEEE---c---------CCCeE------EECceEEeccCCCCCE
Confidence 346664466665 421 2348999999987 6777632 1 01222 222256665422 000
Q ss_pred C--CCCCCC--Cccc---cccceEEeCCCCCcccccCCCCCCceee
Q psy16411 174 V--YPESQM--PLDY---YYLGEVKNAETLNCLDTMGRKTGEKVVI 212 (214)
Q Consensus 174 V--~p~~~~--p~~~---~~~G~i~n~~s~~CLd~~~~~~g~~~~~ 212 (214)
| ++-... +.+. ...|.|+|..+++|||..+...|..|.+
T Consensus 66 v~~~~c~~~~~~~Q~W~~~~~g~i~n~~sg~cLd~~~~~~g~~v~~ 111 (254)
T 1ggp_B 66 AGIYDCTQATAELSAWEIADNGTIINPASSLVLSSGAANSLLDLGV 111 (254)
T ss_dssp EEEECTTTSCHHHHCCEECTTSCEEETTTTEEEECSSSCTTEECEE
T ss_pred EEEEECCCCCCcCCEEEEecCCCEEeCCCCeEEeCCCCCCCCEEEE
Confidence 0 111000 1111 1348999999999999887665655554
No 14
>2aai_B Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG BMA MAN; 2.50A {Ricinus communis} SCOP: b.42.2.1 b.42.2.1 PDB: 3rti_B* 3rtj_B* 1rzo_B*
Probab=92.51 E-value=0.019 Score=48.38 Aligned_cols=98 Identities=14% Similarity=0.163 Sum_probs=55.3
Q ss_pred Ccccccccccceeheee---ecCCeeEEEeCC-CCCccceeccceeecCCCcCCCCCcCCchhHHHHHHHccCCcchhhc
Q psy16411 96 GTSNIVNHNNARLAEVW---QCGGILEIIPCS-HVGHVFRDKSPYTYLNPLGAASVDVGDVSERKELRERLQCKSFRWYL 171 (214)
Q Consensus 96 ~~g~~~~~n~~r~aevW---~~~~~l~l~pC~-~~~~~~~~k~~~~~~~p~~~~~~~~gdit~r~~LR~~l~CksF~Wyl 171 (214)
..+.|.+..++||+-.- .++..|.+++|+ +.+.+|.|... .-|.| |..-.|.+... -
T Consensus 9 ~~~~i~~~sg~cldv~~~~~~~g~~v~~~~c~~~~~~~Q~W~~~------------~~g~i------r~~g~cLdv~g-~ 69 (262)
T 2aai_B 9 PIVRIVGRNGLCVDVRDGRFHNGNAIQLWPCKSNTDANQLWTLK------------RDNTI------RSNGKCLTTYG-Y 69 (262)
T ss_dssp CEECEECGGGCEEEEGGGCCSTTCBEEEECCCSSCCGGGCEEEC------------TTSBE------EETTEEEEESC-S
T ss_pred CeEEEEcCCCceEEcCCCCCCCCCEEEEeeCCCCCChhceEEEe------------CCceE------EECCEEEeccC-C
Confidence 35678887777775332 235589999995 35677777321 11222 22235665532 0
Q ss_pred cc---C--CCCCC--CCccc---cccceEEeCCCCCcccccCCCCCCceee
Q psy16411 172 EN---V--YPESQ--MPLDY---YYLGEVKNAETLNCLDTMGRKTGEKVVI 212 (214)
Q Consensus 172 ~n---V--~p~~~--~p~~~---~~~G~i~n~~s~~CLd~~~~~~g~~~~~ 212 (214)
.+ | ++-.. -+.+. ...|.|+|..+++|||..+..+|..|.+
T Consensus 70 ~~g~~v~~~~c~~~~~~~Q~W~~~~~G~i~n~~sg~cLd~~~~~~g~~v~~ 120 (262)
T 2aai_B 70 SPGVYVMIYDCNTAATDATRWQIWDNGTIINPRSSLVLAATSGNSGTTLTV 120 (262)
T ss_dssp STTCBEEEEETTTSCGGGSBCEECTTSCEEEETTEEEEECSSCSTTCBCEE
T ss_pred CCCCEEEEEeCCCCCCccceEEEcCCCCEEeCCCCceEecCCCCCCceeEE
Confidence 11 0 11101 01111 2358999999999999987766777665
No 15
>3a07_A Actinohivin; carbohydrate-binding module family 13, antiviral protein, LE; 1.19A {Actinomycete}
Probab=91.68 E-value=0.022 Score=42.07 Aligned_cols=35 Identities=20% Similarity=0.183 Sum_probs=22.4
Q ss_pred Ccccccccc-cceeheeeecCCeeEEEeCCCCCccceec
Q psy16411 96 GTSNIVNHN-NARLAEVWQCGGILEIIPCSHVGHVFRDK 133 (214)
Q Consensus 96 ~~g~~~~~n-~~r~aevW~~~~~l~l~pC~~~~~~~~~k 133 (214)
+.+.++|.+ ++|++ +-- .+.+.+++|++ +.+|.|.
T Consensus 5 g~~~i~n~~sg~CLd-~~~-~~~v~~~~C~g-~~~Q~W~ 40 (118)
T 3a07_A 5 ASVTIRNAQTGRLLD-SNY-NGNVYTLPANG-GNYQRWT 40 (118)
T ss_dssp EEECEEETTTCCEEE-ECT-TCCEEEECCCC-CGGGCEE
T ss_pred ceEEEEECCCCcEEe-cCC-CCeEEEECCCC-CccCEEE
Confidence 345677755 55654 322 24799999987 5677774
No 16
>2vlc_A Cinnamomin, type 2 ribosome-inactivating protein cinnamomin III; ribosome inhibiting proteins, toxin, hydrolase, plant defense; HET: AS5 BMA XYP XYS; 2.95A {Cinnamomum camphora}
Probab=91.49 E-value=0.047 Score=51.41 Aligned_cols=99 Identities=11% Similarity=0.057 Sum_probs=55.3
Q ss_pred CCcccccccccceeheee---ecCCeeEEEeCCC-CCccceeccceeecCCCcCCCCCcCCchhHHHHHHHccCCcchhh
Q psy16411 95 GGTSNIVNHNNARLAEVW---QCGGILEIIPCSH-VGHVFRDKSPYTYLNPLGAASVDVGDVSERKELRERLQCKSFRWY 170 (214)
Q Consensus 95 ~~~g~~~~~n~~r~aevW---~~~~~l~l~pC~~-~~~~~~~k~~~~~~~p~~~~~~~~gdit~r~~LR~~l~CksF~Wy 170 (214)
...+.|.+..++|++-.. .++..+.+++|+. .+.+|.|... .-|.|. ..-.|.+..-
T Consensus 315 ~~~~~I~~~sg~CLDv~g~~~~~G~~v~l~~C~~~g~~nQ~W~~~------------~~G~ir------~~g~CLdv~g- 375 (570)
T 2vlc_A 315 EPTVRISGRNGLCVRVRDGKYNNGNPIQLWPCKQNSDVNQLWTLR------------RDGTIR------SNGKCLTTNG- 375 (570)
T ss_dssp CCEECEEEGGGCEEEEGGGCCSTTCBEEEECCCCSCCGGGCEEEC------------TTSBEE------ETTEEEEESC-
T ss_pred CCeEEEECCCCCeEEcCCCCCCCCceEEEEecCCCCChhceEEEc------------CCceEE------ECCeEEcccC-
Confidence 345677776678876432 2345899999943 5677777320 112222 1225666531
Q ss_pred cccCCCCCCCCc-------cc---cccceEEeCCCCCcccccCCCCCCceee
Q psy16411 171 LENVYPESQMPL-------DY---YYLGEVKNAETLNCLDTMGRKTGEKVVI 212 (214)
Q Consensus 171 l~nV~p~~~~p~-------~~---~~~G~i~n~~s~~CLd~~~~~~g~~~~~ 212 (214)
-.+-.+....++ +. ...|.|+|..+++|||..+...|..|.+
T Consensus 376 ~~~G~~V~~~~C~g~~~~nQ~W~~~~~G~i~n~~Sg~CLDv~~~~~g~~v~~ 427 (570)
T 2vlc_A 376 YSAGDYVMIYDCRTPVTAASIWQFWANGTIINPQSALVLSAESGNPRTTLTV 427 (570)
T ss_dssp SSTTCBEEEECCCSSCCGGGBCEECTTSCEEETTTTEEEECSSSSTTCBCEE
T ss_pred CCCCceEEEEecCCCCCCCceEEEccCCeEEECCCCceEecCCCcceeeEEE
Confidence 000001011111 11 1358899999999999987766777665
No 17
>2aai_B Ricin (B chain); glycosidase; HET: GAL BGC NDG NAG BMA MAN; 2.50A {Ricinus communis} SCOP: b.42.2.1 b.42.2.1 PDB: 3rti_B* 3rtj_B* 1rzo_B*
Probab=90.47 E-value=0.031 Score=47.00 Aligned_cols=31 Identities=23% Similarity=0.086 Sum_probs=22.0
Q ss_pred ccccccceeheeeecCCeeEEEeCCCCCccceec
Q psy16411 100 IVNHNNARLAEVWQCGGILEIIPCSHVGHVFRDK 133 (214)
Q Consensus 100 ~~~~n~~r~aevW~~~~~l~l~pC~~~~~~~~~k 133 (214)
+.+...+|++. .+..+.+++||+.+.+|.|.
T Consensus 144 i~~~~~~CLd~---~g~~v~l~~C~~~~~~Q~w~ 174 (262)
T 2aai_B 144 IVGLYGLCLQA---NSGQVWIEDCSSEKAEQQWA 174 (262)
T ss_dssp EECGGGCEEEE---ETTEEEEECCCTTSSCCCEE
T ss_pred eeccCCeeeec---CCceEEEEecCCCCCcCEEE
Confidence 44445667753 35689999999877777773
No 18
>1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A*
Probab=90.08 E-value=0.26 Score=45.08 Aligned_cols=71 Identities=20% Similarity=0.298 Sum_probs=46.0
Q ss_pred ccccccc-cceeheeeec-CCeeEEEeCCCCCccceeccceeecCCCcCCCCCcCCchhHHHHHHHccCCcchhhcccCC
Q psy16411 98 SNIVNHN-NARLAEVWQC-GGILEIIPCSHVGHVFRDKSPYTYLNPLGAASVDVGDVSERKELRERLQCKSFRWYLENVY 175 (214)
Q Consensus 98 g~~~~~n-~~r~aevW~~-~~~l~l~pC~~~~~~~~~k~~~~~~~p~~~~~~~~gdit~r~~LR~~l~CksF~Wyl~nV~ 175 (214)
+.|+|.+ ++||+-.-.. +..|.+++|++. .+|.| .+..+-
T Consensus 109 y~I~N~~SG~CLDv~g~~~Ga~V~l~~C~g~-~nQ~W-------------------------------------~lt~~g 150 (432)
T 1vcl_A 109 TEIINLASGKCLDIEGSDGTGDIGVYDCQNL-DDQYF-------------------------------------YVRSRG 150 (432)
T ss_dssp EEEEETTTCCEEEESSSSSCSBEEEECCCCC-GGGCE-------------------------------------EECCCC
T ss_pred eEEEECCCCceeeecCCCCCCeEEEEeCCCC-Cccce-------------------------------------eeecCC
Confidence 3777865 6666543222 458999999986 44443 322211
Q ss_pred CCCCCCccccccceEEeCCCCCcccccCCCCCCceeec
Q psy16411 176 PESQMPLDYYYLGEVKNAETLNCLDTMGRKTGEKVVIP 213 (214)
Q Consensus 176 p~~~~p~~~~~~G~i~n~~s~~CLd~~~~~~g~~~~~~ 213 (214)
+ ..+.|+|++..+++|||..+...|..|.++
T Consensus 151 ~-------g~~~G~Irn~~sg~CLDv~g~s~Ga~V~l~ 181 (432)
T 1vcl_A 151 P-------ELFYGRLRNEKSDLCLDVEGSDGKGNVLMY 181 (432)
T ss_dssp C-------EEEEEEEEETTTCCEEEESSSSSCEEEEEE
T ss_pred C-------CccceEEEECCCCcEEEecCCCCCCeEEEE
Confidence 1 124589999999999999877667777653
No 19
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A
Probab=88.50 E-value=0.064 Score=48.58 Aligned_cols=100 Identities=16% Similarity=0.170 Sum_probs=52.8
Q ss_pred CCCcccccccc-cceeheeee---cCCeeEEEeCCCCCccceeccceeecCCCcCCCCCcCCchhHHHHHHHccCCcchh
Q psy16411 94 PGGTSNIVNHN-NARLAEVWQ---CGGILEIIPCSHVGHVFRDKSPYTYLNPLGAASVDVGDVSERKELRERLQCKSFRW 169 (214)
Q Consensus 94 p~~~g~~~~~n-~~r~aevW~---~~~~l~l~pC~~~~~~~~~k~~~~~~~p~~~~~~~~gdit~r~~LR~~l~CksF~W 169 (214)
|.+.+.|+|.+ ++|++-... ++..+.+++|++ +.+|.|... ..|+|. ...-.|.+..
T Consensus 309 ~~~~~~i~n~~sg~CLDv~~~~~~~g~~v~~~~C~g-~~nQ~W~~~------------~~g~i~-----~~sg~CLdv~- 369 (436)
T 2d1z_A 309 PSGGGQIKGVGSGRCLDVPNASTTDGTQVQLYDCHS-ATNQQWTYT------------DAGELR-----VYGDKCLDAA- 369 (436)
T ss_dssp ----CCEEETTTCCEEECGGGCCCTTEECEEECCCS-CGGGCCEEC------------TTSCEE-----ETTTEEEEES-
T ss_pred CCCceEEEECCCCceEeccCCcCCCCceEEEEecCC-CCceEEEEe------------cCceEE-----ECCCeEEEEC-
Confidence 44567888865 666654332 244899999998 467777321 113332 0122466654
Q ss_pred hcccCCCCCCCCc-----cc---cccceEEeCCCCCcccccCC--CCCCceee
Q psy16411 170 YLENVYPESQMPL-----DY---YYLGEVKNAETLNCLDTMGR--KTGEKVVI 212 (214)
Q Consensus 170 yl~nV~p~~~~p~-----~~---~~~G~i~n~~s~~CLd~~~~--~~g~~~~~ 212 (214)
--.+-.+....++ +. ...|.|+|..|++|||..+. .+|..|.+
T Consensus 370 ~~~~G~~v~~~~C~g~~nQ~W~~~~~G~i~~~~sg~cLdv~~~s~~~g~~v~~ 422 (436)
T 2d1z_A 370 GTGNGTKVQIYSCWGGDNQKWRLNSDGSIVGVQSGLCLDAVGGGTANGTLIQL 422 (436)
T ss_dssp SSSTTCBEEEEECCCCGGGCEEECTTSCEEETTTCCEEEEGGGCCSTTCBEEE
T ss_pred CCCCCceEEEEecCCCCCceEEECCCCeEEECCCCCeEecCCCCCCCCCEEEE
Confidence 0001001111111 11 13589999999999998764 34566654
No 20
>1ggp_B TKL-1, protein (lectin 1 B chain); sugar binding protein; 2.70A {Trichosanthes kirilowii} SCOP: b.42.2.1 b.42.2.1
Probab=87.69 E-value=0.076 Score=44.35 Aligned_cols=27 Identities=11% Similarity=0.222 Sum_probs=20.0
Q ss_pred ccceEEeCCCCCcccccCCC-CCCceee
Q psy16411 186 YLGEVKNAETLNCLDTMGRK-TGEKVVI 212 (214)
Q Consensus 186 ~~G~i~n~~s~~CLd~~~~~-~g~~~~~ 212 (214)
..|.|+|..+++|||..+.. ++..|.+
T Consensus 212 ~~g~i~~~~sg~CLd~~~~~~~~~~v~~ 239 (254)
T 1ggp_B 212 DDGSILSLYDDKQMDSEGAAAAAKQIIL 239 (254)
T ss_dssp TTSSEEETTTTEEEEESSSCCSSSCEEE
T ss_pred CCCcEEeCCCCeEEeCCCCCCCCceEEE
Confidence 35889999999999987632 3555654
No 21
>1vcl_A Hemolytic lectin CEL-III; hemolysis, hemagglutination, pore-forming, calcium, toxin; HET: BTB; 1.70A {Cucumaria echinata} SCOP: b.42.2.1 b.42.2.1 d.281.1.1 PDB: 2z48_A* 2z49_A*
Probab=81.32 E-value=0.96 Score=41.28 Aligned_cols=25 Identities=24% Similarity=0.360 Sum_probs=21.6
Q ss_pred eEEeCCCCCcccccCCCCCCceeec
Q psy16411 189 EVKNAETLNCLDTMGRKTGEKVVIP 213 (214)
Q Consensus 189 ~i~n~~s~~CLd~~~~~~g~~~~~~ 213 (214)
.|+|..+++|||..+...|..|+++
T Consensus 110 ~I~N~~SG~CLDv~g~~~Ga~V~l~ 134 (432)
T 1vcl_A 110 EIINLASGKCLDIEGSDGTGDIGVY 134 (432)
T ss_dssp EEEETTTCCEEEESSSSSCSBEEEE
T ss_pred EEEECCCCceeeecCCCCCCeEEEE
Confidence 9999999999999887777777764
No 22
>2vlc_A Cinnamomin, type 2 ribosome-inactivating protein cinnamomin III; ribosome inhibiting proteins, toxin, hydrolase, plant defense; HET: AS5 BMA XYP XYS; 2.95A {Cinnamomum camphora}
Probab=60.33 E-value=9.8 Score=35.51 Aligned_cols=27 Identities=11% Similarity=0.187 Sum_probs=19.4
Q ss_pred cccceeheeeecCCeeEEEeCCCCCcccee
Q psy16411 103 HNNARLAEVWQCGGILEIIPCSHVGHVFRD 132 (214)
Q Consensus 103 ~n~~r~aevW~~~~~l~l~pC~~~~~~~~~ 132 (214)
...+|++. ++..+.+++||+.+.+|.|
T Consensus 454 ~s~~CLD~---~g~~v~l~~C~g~~~~Q~W 480 (570)
T 2vlc_A 454 FNDLCMQA---NGDAMWVVECESSKAEQKW 480 (570)
T ss_dssp GGGEEEEE---ETTEEEEEECCTTCSTTCE
T ss_pred ccceeccc---cccceEEEecCCCCcCcEE
Confidence 44667652 4678999999987666665
No 23
>3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene}
Probab=54.26 E-value=6.6 Score=29.81 Aligned_cols=27 Identities=15% Similarity=0.123 Sum_probs=20.1
Q ss_pred ccceEEeCCCCCcccccCC--CCCCceee
Q psy16411 186 YLGEVKNAETLNCLDTMGR--KTGEKVVI 212 (214)
Q Consensus 186 ~~G~i~n~~s~~CLd~~~~--~~g~~~~~ 212 (214)
....|+|..+++|||..+. ..|..|.+
T Consensus 27 g~y~i~n~~sg~cLdv~~~~~~~g~~v~~ 55 (165)
T 3pg0_A 27 GYYKLVARHSGKALDVENASTSDGANVIQ 55 (165)
T ss_dssp CEEEEEETTTCCEEEEGGGCCSTTCBEEE
T ss_pred CEEEEEECCCCCEEEeCCCCCCCCCEEEE
Confidence 3468999999999998764 34666654
No 24
>3a07_A Actinohivin; carbohydrate-binding module family 13, antiviral protein, LE; 1.19A {Actinomycete}
Probab=53.97 E-value=4.9 Score=29.00 Aligned_cols=18 Identities=44% Similarity=0.558 Sum_probs=14.8
Q ss_pred cceEEeCCCCCcccccCC
Q psy16411 187 LGEVKNAETLNCLDTMGR 204 (214)
Q Consensus 187 ~G~i~n~~s~~CLd~~~~ 204 (214)
.|+|++..+++|||..+.
T Consensus 44 ~g~i~~~~sg~CLd~~~~ 61 (118)
T 3a07_A 44 DGTVRNAQTGRCLDSNYD 61 (118)
T ss_dssp SSCCEETTTCCEEEECTT
T ss_pred CEEEEECCCCcEEecCCC
Confidence 478999889999998654
No 25
>2dry_A 29-kDa galactose-binding lectin; earthworm lumbricus terrestris, sialic acid, in vitro evolution, beta-trefoil fold, sugar binding protein; HET: PGE; 1.80A {Lumbricus terrestris} PDB: 2drz_A* 2ds0_A* 2zqn_A* 2zqo_A*
Probab=46.95 E-value=8 Score=28.75 Aligned_cols=28 Identities=11% Similarity=0.071 Sum_probs=17.6
Q ss_pred cccccccceeheee---ec-CCeeEEEeCCCC
Q psy16411 99 NIVNHNNARLAEVW---QC-GGILEIIPCSHV 126 (214)
Q Consensus 99 ~~~~~n~~r~aevW---~~-~~~l~l~pC~~~ 126 (214)
.|++.+.-++++|- .. +-.|.+++|++.
T Consensus 5 ~i~n~~SGk~LDV~g~s~~~Ga~v~~w~~~~~ 36 (130)
T 2dry_A 5 YIKSELNGKVLDIGGQNPAPGSKIITWDQKKG 36 (130)
T ss_dssp EEEETTTSCEEEEGGGCCSTTCBEEEECCCCS
T ss_pred EEEECCCCCEEEECCCCcCCCceEEEEEecCC
Confidence 46776644444553 22 338999999985
No 26
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A
Probab=46.87 E-value=6.7 Score=35.13 Aligned_cols=27 Identities=26% Similarity=0.428 Sum_probs=20.4
Q ss_pred cceEEeCCCCCcccccCCC--CCCceeec
Q psy16411 187 LGEVKNAETLNCLDTMGRK--TGEKVVIP 213 (214)
Q Consensus 187 ~G~i~n~~s~~CLd~~~~~--~g~~~~~~ 213 (214)
.|.|+|..+++|||..+.+ +|..|+++
T Consensus 312 ~~~i~n~~sg~CLDv~~~~~~~g~~v~~~ 340 (436)
T 2d1z_A 312 GGQIKGVGSGRCLDVPNASTTDGTQVQLY 340 (436)
T ss_dssp -CCEEETTTCCEEECGGGCCCTTEECEEE
T ss_pred ceEEEECCCCceEeccCCcCCCCceEEEE
Confidence 4789999999999997753 46666653
No 27
>2ao3_A 29-kDa galactose-binding lectin; earthworm lumbricus terrestris, hemagglutinin, R-type lectin, beta-trefoil fold, sugar complex; HET: MGC; 1.80A {Lumbricus terrestris} PDB: 2d12_A* 2zqo_A* 2zqn_A* 2dry_A* 2drz_A* 2ds0_A*
Probab=40.96 E-value=11 Score=27.35 Aligned_cols=34 Identities=9% Similarity=-0.237 Sum_probs=20.3
Q ss_pred cccccc-cceeheee---ecCCeeEEEeCCC--CCcccee
Q psy16411 99 NIVNHN-NARLAEVW---QCGGILEIIPCSH--VGHVFRD 132 (214)
Q Consensus 99 ~~~~~n-~~r~aevW---~~~~~l~l~pC~~--~~~~~~~ 132 (214)
.|++.+ ++||+-.- .++..|.+++|++ .+.+|.|
T Consensus 5 ~I~n~~sg~cLDv~~~~~~~g~~v~~~~c~~~~g~~nQ~W 44 (130)
T 2ao3_A 5 YIKSELNGKVLDIEGQNPAPGSKIITWDQKKGPTAVNQLW 44 (130)
T ss_dssp EEEETTTSCEEEEGGGCCSTTCBEEEECCCCSGGGGGGCE
T ss_pred EEEECCCCcEEEeCCCCCCCCCEEEEEecCCCCCCcccEE
Confidence 466644 55554322 1345899999994 3456666
No 28
>1m2t_B Mistletoe lectin I B chain; ribosome inactivation, ribosome inhibitor, hydrolase; HET: NAG FUC ADE; 1.89A {Viscum album} SCOP: b.42.2.1 b.42.2.1 PDB: 2r9k_B* 3d7w_B* 3cef_B* 1sz6_B* 1pum_B* 1puu_B* 2rg9_B* 3o5w_B* 1onk_B* 1oql_B* 1tfm_B* 1pc8_B* 1yf8_B* 1ce7_B* 2mll_B*
Probab=40.04 E-value=9 Score=31.61 Aligned_cols=26 Identities=15% Similarity=0.239 Sum_probs=19.0
Q ss_pred cceEEeCCCCCcccccCC-CCCCceee
Q psy16411 187 LGEVKNAETLNCLDTMGR-KTGEKVVI 212 (214)
Q Consensus 187 ~G~i~n~~s~~CLd~~~~-~~g~~~~~ 212 (214)
.|.|+|..+++|||..+. .+|..|.+
T Consensus 222 ~g~i~~~~sg~cLDv~~~~~~g~~v~~ 248 (263)
T 1m2t_B 222 EGAILNLKNGLAMDVAQANPSLQRIII 248 (263)
T ss_dssp TSCEEETTTCCEEEEGGGCGGGCCEEE
T ss_pred CCCEEECCCCeEEecCCCCCCCCEEEE
Confidence 488999999999998762 23455544
No 29
>3c9z_A Agglutinin II, SNA-II; beta-trefoil, ricin-B domain, glycosylation, glycoprotein, L sugar binding protein, plant protein; HET: NAG FUC SO4; 1.35A {Sambucus nigra} PDB: 3ca0_A* 3ca1_A* 3ca3_A* 3ca4_A* 3ca5_A* 3ca6_A* 3cah_A* 1hwm_B* 1hwn_B* 1hwo_B* 1hwp_B*
Probab=35.34 E-value=13 Score=30.35 Aligned_cols=25 Identities=20% Similarity=0.417 Sum_probs=19.2
Q ss_pred cceEEeCCCCCcccccCCCCCCceeec
Q psy16411 187 LGEVKNAETLNCLDTMGRKTGEKVVIP 213 (214)
Q Consensus 187 ~G~i~n~~s~~CLd~~~~~~g~~~~~~ 213 (214)
.|.|++ +++|||..+...|..|.++
T Consensus 46 ~g~ir~--~g~CLd~~g~~~g~~v~~~ 70 (258)
T 3c9z_A 46 DDTIRS--MGKCMTANGLNNGSNIVIF 70 (258)
T ss_dssp TSCEEE--TTEEEEEESSSTTCEEEEE
T ss_pred CCeEEE--CCeEEcccCCCCCCEEEEE
Confidence 478998 6899999875567777663
No 30
>3pg0_A Threefoil; symmetric design, beta-trefoil, engineered module, sugar BIN NOVO protein; HET: BTB GOL; 1.62A {Artificial gene}
Probab=33.84 E-value=21 Score=26.90 Aligned_cols=41 Identities=12% Similarity=-0.025 Sum_probs=25.7
Q ss_pred cCCCCcccccccc-cceeheee---ecCCeeEEEeCCCCCccceec
Q psy16411 92 TFPGGTSNIVNHN-NARLAEVW---QCGGILEIIPCSHVGHVFRDK 133 (214)
Q Consensus 92 ~~p~~~g~~~~~n-~~r~aevW---~~~~~l~l~pC~~~~~~~~~k 133 (214)
..+.+...|++.+ ++|++-.. .++..+.+++|++. .+|.|.
T Consensus 23 ~~~~g~y~i~n~~sg~cLdv~~~~~~~g~~v~~~~c~~~-~~Q~W~ 67 (165)
T 3pg0_A 23 HMGDGYYKLVARHSGKALDVENASTSDGANVIQYSYSGG-DNQQWR 67 (165)
T ss_dssp ---CCEEEEEETTTCCEEEEGGGCCSTTCBEEEECCCCC-GGGCEE
T ss_pred ECCCCEEEEEECCCCCEEEeCCCCCCCCCEEEEECCCCC-ccceEE
Confidence 4456777888865 56664322 22448999999986 477774
No 31
>1abr_B Abrin-A; glycosidase/carbohydrate complex, lectin, lectin (agglutinin), glycoprotein, plant SEED protein, plant toxin; HET: NDG NGZ MAN BMA BGC; 2.14A {Abrus precatorius} SCOP: b.42.2.1 b.42.2.1 PDB: 2zr1_B* 2q3n_B*
Probab=29.44 E-value=23 Score=29.12 Aligned_cols=25 Identities=28% Similarity=0.418 Sum_probs=19.1
Q ss_pred cceEEeCCCCCcccccCCCCCCceeec
Q psy16411 187 LGEVKNAETLNCLDTMGRKTGEKVVIP 213 (214)
Q Consensus 187 ~G~i~n~~s~~CLd~~~~~~g~~~~~~ 213 (214)
.|.||+ +++|||..+...|..|.++
T Consensus 59 ~g~ir~--~g~CLdv~g~~~g~~v~~~ 83 (267)
T 1abr_B 59 DKTIRS--NGKCLTTYGYAPGSYVMIY 83 (267)
T ss_dssp TSBEEE--TTEEEEESCSSTTCBEEEE
T ss_pred CceEEE--CCEEEcccCCCCCCEEEEE
Confidence 478997 6799999875567777663
No 32
>3nbc_A Ricin B-like lectin; lactose, sugar BIND protein; HET: LAT; 1.01A {Clitocybe nebularis} PDB: 3nbd_A* 3nbe_A*
Probab=25.61 E-value=26 Score=26.88 Aligned_cols=24 Identities=13% Similarity=0.091 Sum_probs=19.5
Q ss_pred eEEeCCCCCcccccCCCCCCceee
Q psy16411 189 EVKNAETLNCLDTMGRKTGEKVVI 212 (214)
Q Consensus 189 ~i~n~~s~~CLd~~~~~~g~~~~~ 212 (214)
.|+++.+++|||.....+|..|.+
T Consensus 105 ~I~~~~sg~~Ldv~stanGt~i~~ 128 (148)
T 3nbc_A 105 RIKIPNLGLALTLPSDANSTPIVL 128 (148)
T ss_dssp EEECTTSSEEEECCCSSTTEECEE
T ss_pred EEEeCCCCeEEEeecCCCCcEEEE
Confidence 799999999999886666766655
Done!