BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy16416
(64 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6WV17|GALT5_DROME Polypeptide N-acetylgalactosaminyltransferase 5 OS=Drosophila
melanogaster GN=pgant5 PE=2 SV=2
Length = 630
Score = 57.4 bits (137), Expect = 2e-08, Method: Composition-based stats.
Identities = 24/30 (80%), Positives = 26/30 (86%)
Query: 1 MPLDYYYLGEVKNAETLNCLDTMGRKTGEK 30
MPLDYYYLGE++NAET CLDTMGRK EK
Sbjct: 495 MPLDYYYLGEIRNAETETCLDTMGRKYNEK 524
>sp|Q8CF93|GLT13_MOUSE Polypeptide N-acetylgalactosaminyltransferase 13 OS=Mus musculus
GN=Galnt13 PE=2 SV=1
Length = 556
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 1 MPLDYYYLGEVKNAETLNCLDTMGRKTGEK 30
+P YY LGE++N ET CLD MGRK EK
Sbjct: 423 IPRRYYSLGEIRNVETNQCLDNMGRKENEK 452
>sp|Q8IUC8|GLT13_HUMAN Polypeptide N-acetylgalactosaminyltransferase 13 OS=Homo sapiens
GN=GALNT13 PE=2 SV=2
Length = 556
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 1 MPLDYYYLGEVKNAETLNCLDTMGRKTGEK 30
+P YY LGE++N ET CLD MGRK EK
Sbjct: 423 IPRRYYSLGEIRNVETNQCLDNMGRKENEK 452
>sp|Q6UE39|GLT13_RAT Polypeptide N-acetylgalactosaminyltransferase 13 OS=Rattus
norvegicus GN=Galnt13 PE=2 SV=1
Length = 556
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 1 MPLDYYYLGEVKNAETLNCLDTMGRKTGEK 30
+P YY LGE++N ET CLD MGRK EK
Sbjct: 423 IPRRYYSLGEIRNVETNQCLDNMGRKENEK 452
>sp|Q10473|GALT1_RAT Polypeptide N-acetylgalactosaminyltransferase 1 OS=Rattus
norvegicus GN=Galnt1 PE=1 SV=1
Length = 559
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 1 MPLDYYYLGEVKNAETLNCLDTMGRKTGEK 30
+P Y+ LGE++N ET CLD M RK EK
Sbjct: 424 IPRHYFSLGEIRNVETNQCLDNMARKENEK 453
>sp|O08912|GALT1_MOUSE Polypeptide N-acetylgalactosaminyltransferase 1 OS=Mus musculus
GN=Galnt1 PE=1 SV=1
Length = 559
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 1 MPLDYYYLGEVKNAETLNCLDTMGRKTGEK 30
+P Y+ LGE++N ET CLD M RK EK
Sbjct: 424 IPRHYFSLGEIRNVETNQCLDNMARKENEK 453
>sp|Q10472|GALT1_HUMAN Polypeptide N-acetylgalactosaminyltransferase 1 OS=Homo sapiens
GN=GALNT1 PE=1 SV=1
Length = 559
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 1 MPLDYYYLGEVKNAETLNCLDTMGRKTGEK 30
+P Y+ LGE++N ET CLD M RK EK
Sbjct: 424 IPRHYFSLGEIRNVETNQCLDNMARKENEK 453
>sp|Q07537|GALT1_BOVIN Polypeptide N-acetylgalactosaminyltransferase 1 OS=Bos taurus
GN=GALNT1 PE=1 SV=1
Length = 559
Score = 39.7 bits (91), Expect = 0.006, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 1 MPLDYYYLGEVKNAETLNCLDTMGRKTGEK 30
+P Y+ LGE++N ET CLD M RK EK
Sbjct: 424 IPRHYFSLGEIRNVETNQCLDNMARKENEK 453
>sp|Q29121|GALT1_PIG Polypeptide N-acetylgalactosaminyltransferase 1 OS=Sus scrofa
GN=GALNT1 PE=2 SV=1
Length = 559
Score = 37.7 bits (86), Expect = 0.022, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 1 MPLDYYYLGEVKNAETLNCLDTMGRKTGEK 30
+P Y LGE++N ET CLD M RK EK
Sbjct: 424 IPRHYSSLGEIRNVETNQCLDNMARKENEK 453
>sp|P34678|GALT3_CAEEL Polypeptide N-acetylgalactosaminyltransferase 3 OS=Caenorhabditis
elegans GN=gly-3 PE=2 SV=2
Length = 612
Score = 30.0 bits (66), Expect = 5.0, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 1 MPLDYYYLGEVKNAETLNCLDTMGRKTGE 29
+P D+ LG + N T C+DT G+K G+
Sbjct: 478 LPADFRSLGAIVNRFTEKCVDTNGKKDGQ 506
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,162,122
Number of Sequences: 539616
Number of extensions: 759701
Number of successful extensions: 1304
Number of sequences better than 100.0: 15
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1289
Number of HSP's gapped (non-prelim): 15
length of query: 64
length of database: 191,569,459
effective HSP length: 36
effective length of query: 28
effective length of database: 172,143,283
effective search space: 4820011924
effective search space used: 4820011924
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)