Query psy16421
Match_columns 151
No_of_seqs 105 out of 1128
Neff 10.8
Searched_HMMs 29240
Date Fri Aug 16 20:52:41 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy16421.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/16421hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b43_A Titin; I-SET IG fold, e 99.9 2.1E-21 7.3E-26 144.5 13.7 128 1-145 351-521 (570)
2 2rik_A Titin; I-SET IG fold, p 99.9 9.7E-21 3.3E-25 129.3 14.6 129 1-145 65-236 (284)
3 3b43_A Titin; I-SET IG fold, e 99.9 9.9E-21 3.4E-25 140.9 12.7 128 1-144 257-427 (570)
4 2yd9_A Receptor-type tyrosine- 99.8 2.9E-20 1E-24 128.2 13.7 135 1-145 67-249 (304)
5 1qz1_A Neural cell adhesion mo 99.8 2.6E-20 8.9E-25 127.5 12.8 129 1-145 66-240 (291)
6 2wim_A N-CAM 2, NCAM2, neural 99.8 5.3E-20 1.8E-24 125.9 11.4 128 1-144 64-237 (291)
7 3laf_A Deleted in colorectal c 99.8 1.8E-19 6.1E-24 128.4 12.0 135 1-145 181-356 (403)
8 3kld_A Contactin 4, axcam, BIG 99.8 9.9E-20 3.4E-24 129.6 10.1 137 1-144 161-338 (384)
9 3ejj_X Macrophage colony-stimu 99.8 3.2E-18 1.1E-22 116.9 12.2 127 1-143 55-229 (289)
10 3dmk_A DOWN syndrome cell adhe 99.8 2.7E-18 9.2E-23 132.2 12.9 127 1-144 310-472 (816)
11 2wng_A Tyrosine-protein phosph 99.8 4.5E-18 1.5E-22 118.4 10.7 126 1-143 78-264 (327)
12 1itb_B Type 1 interleukin-1 re 99.8 3.9E-18 1.3E-22 118.0 10.2 131 1-145 66-253 (315)
13 1cs6_A Axonin-1; neural cell a 99.8 4E-18 1.4E-22 120.8 10.3 135 1-144 162-337 (382)
14 3qs7_E FL cytokine receptor; i 99.8 6.2E-18 2.1E-22 122.1 10.3 123 1-143 107-270 (423)
15 2o26_X MAST/stem cell growth f 99.8 1E-17 3.6E-22 114.7 11.0 121 1-141 61-229 (290)
16 3p3y_A Neurofascin; IG domains 99.8 7.9E-18 2.7E-22 119.8 10.6 138 1-145 175-356 (404)
17 3laf_A Deleted in colorectal c 99.7 2.5E-17 8.7E-22 117.2 12.6 126 3-144 88-264 (403)
18 3p3y_A Neurofascin; IG domains 99.7 2.8E-17 9.5E-22 117.0 12.8 128 3-144 83-265 (404)
19 4fqp_A Poliovirus receptor; im 99.7 7.7E-18 2.6E-22 116.6 9.4 126 1-142 83-259 (313)
20 4fom_A Poliovirus receptor-rel 99.7 2E-18 6.9E-23 119.2 6.4 127 1-143 78-255 (308)
21 2ec8_A MAST/stem cell growth f 99.7 1.5E-17 5.2E-22 122.4 10.6 134 1-145 172-358 (524)
22 3qs7_E FL cytokine receptor; i 99.7 8.4E-18 2.9E-22 121.4 8.8 122 5-144 199-369 (423)
23 1e07_A Carcinoembryonic antige 99.7 8.9E-17 3E-21 120.9 14.5 128 1-143 430-601 (642)
24 1bih_A Hemolin; insect immunit 99.7 3.8E-17 1.3E-21 116.0 11.7 137 1-143 165-351 (395)
25 3oq3_B IFN-alpha/beta binding 99.7 2E-17 6.8E-22 115.4 10.0 129 1-146 93-277 (329)
26 2rcj_C Light chain; immunoglob 99.7 4.8E-17 1.6E-21 119.8 12.3 130 1-142 74-262 (523)
27 3qs9_E FL cytokine receptor; i 99.7 2.7E-17 9.4E-22 121.7 10.8 116 1-142 294-448 (527)
28 3u83_A Poliovirus receptor-rel 99.7 3.6E-17 1.2E-21 113.7 10.6 129 1-143 96-275 (331)
29 3qs9_E FL cytokine receptor; i 99.7 2.2E-17 7.7E-22 122.1 10.0 124 4-145 198-370 (527)
30 2y23_A Myomesin; structural pr 99.7 1.9E-17 6.6E-22 114.1 9.1 138 1-144 62-265 (312)
31 4dep_C Interleukin-1 receptor 99.7 2.2E-17 7.4E-22 115.8 9.2 129 1-144 83-273 (349)
32 1ry7_B FGFR-3, fibroblast grow 99.7 1.1E-17 3.8E-22 116.5 7.2 140 1-143 65-268 (334)
33 1e07_A Carcinoembryonic antige 99.7 2.1E-16 7.2E-21 118.9 14.0 127 1-144 346-509 (642)
34 2v5m_A Dscam; neurobiology SPL 99.7 6.1E-17 2.1E-21 114.8 10.0 135 1-144 168-350 (388)
35 3mjg_X Beta-type platelet-deri 99.7 2.9E-17 9.8E-22 112.3 7.9 127 1-140 55-220 (289)
36 3dmk_A DOWN syndrome cell adhe 99.7 2E-16 6.8E-21 121.8 13.3 128 1-143 393-568 (816)
37 2ec8_A MAST/stem cell growth f 99.7 1.7E-16 5.7E-21 116.9 11.3 122 1-141 84-252 (524)
38 2y25_A Myomesin; structural pr 99.7 3.2E-18 1.1E-22 118.2 1.3 38 108-145 229-266 (317)
39 3rjd_A High affinity immunoglo 99.7 1.2E-15 4.1E-20 102.7 13.7 122 1-143 52-217 (262)
40 3o4o_C Interleukin-1 receptor 99.7 1.1E-17 3.8E-22 116.8 3.7 127 1-142 85-271 (339)
41 4dkd_C Macrophage colony-stimu 99.7 5E-17 1.7E-21 111.1 6.6 125 1-142 55-228 (292)
42 2rcj_C Light chain; immunoglob 99.7 5.6E-16 1.9E-20 114.0 11.8 125 1-143 285-469 (523)
43 1qgc_4 Protein (immunoglobulin 99.7 6.2E-16 2.1E-20 111.3 11.7 125 1-138 79-257 (438)
44 1bih_A Hemolin; insect immunit 99.7 1.3E-16 4.6E-21 113.2 6.2 127 1-144 66-255 (395)
45 3vh8_G Killer cell immunoglobu 99.6 3.7E-15 1.3E-19 103.3 12.7 126 1-143 78-259 (316)
46 2ocw_A Polymeric-immunoglobuli 99.6 3.8E-15 1.3E-19 110.8 13.4 128 1-145 294-490 (585)
47 1z7z_I Intercellular adhesion 99.6 4.2E-15 1.4E-19 107.4 13.0 124 1-143 54-233 (450)
48 3kld_A Contactin 4, axcam, BIG 99.6 9.6E-16 3.3E-20 109.0 9.1 123 5-142 71-246 (384)
49 1wio_A CD4, T-cell surface gly 99.6 7.9E-16 2.7E-20 108.5 8.6 120 1-144 71-224 (363)
50 1cs6_A Axonin-1; neural cell a 99.6 8.6E-16 2.9E-20 108.8 8.5 126 2-142 66-248 (382)
51 1z7z_I Intercellular adhesion 99.6 1.3E-15 4.4E-20 110.1 8.6 122 3-145 250-414 (450)
52 1za6_B IGG heavy chain; immuno 99.6 6.3E-16 2.2E-20 108.5 6.7 76 1-88 83-160 (344)
53 2oz4_A Intercellular adhesion 99.6 1.4E-15 4.8E-20 103.0 8.1 120 4-144 66-228 (265)
54 3v2a_R Vascular endothelial gr 99.6 4.7E-17 1.6E-21 124.3 0.0 122 7-145 523-710 (772)
55 2v5m_A Dscam; neurobiology SPL 99.6 2.8E-15 9.7E-20 106.2 8.9 125 1-140 63-251 (388)
56 2c1o_A IGK-C protein; FAB frag 99.6 9.2E-15 3.2E-19 98.3 8.7 65 4-87 11-80 (254)
57 4fa8_A Secreted protein BARF1; 99.6 2.3E-15 7.9E-20 98.7 5.2 108 1-127 73-187 (203)
58 1hzh_H IGG, immunoglobulin hea 99.6 1E-14 3.5E-19 105.8 8.3 77 1-88 83-172 (457)
59 1qgc_4 Protein (immunoglobulin 99.6 1.5E-14 5.1E-19 104.1 8.9 71 1-87 185-257 (438)
60 1wio_A CD4, T-cell surface gly 99.6 6.4E-15 2.2E-19 103.9 6.8 123 1-143 146-325 (363)
61 1igt_B IGG2A intact antibody - 99.6 1.3E-14 4.5E-19 104.8 8.6 76 1-88 83-163 (444)
62 2wqr_A IG epsilon chain C regi 99.6 2.3E-15 7.8E-20 104.7 4.3 127 4-143 79-263 (323)
63 3v2a_R Vascular endothelial gr 99.5 1.8E-15 6.2E-20 115.6 3.8 124 1-139 294-462 (772)
64 2c5d_C AXL oncogene, tyrosine- 99.5 1.1E-13 3.8E-18 89.4 10.7 94 48-144 2-150 (195)
65 2ocw_A Polymeric-immunoglobuli 99.5 3.2E-13 1.1E-17 100.5 13.7 73 1-89 79-152 (585)
66 1epf_A NCAM, protein (neural c 99.5 1.7E-13 5.9E-18 88.1 10.6 94 49-144 3-143 (191)
67 2a38_A Titin; Z1Z2, structural 99.5 1E-13 3.6E-18 89.3 9.2 95 47-144 4-146 (194)
68 1igy_B IGG1 intact antibody MA 99.5 9.8E-15 3.3E-19 105.3 4.4 76 1-88 82-159 (434)
69 1igt_B IGG2A intact antibody - 99.5 5E-14 1.7E-18 101.8 7.9 137 2-143 189-390 (444)
70 1rhf_A Tyrosine-protein kinase 99.5 2E-13 6.8E-18 87.2 9.7 85 58-143 10-141 (182)
71 2yd6_A PTPRD protein; hydrolas 99.5 3.1E-13 1.1E-17 88.5 10.5 95 47-144 5-151 (212)
72 2yd1_A Tyrosine-protein phosph 99.5 1.1E-12 3.9E-17 85.8 12.8 95 47-144 5-153 (212)
73 2iep_A Muscle-specific kinase 99.5 8.4E-14 2.9E-18 89.6 7.1 95 47-144 6-143 (192)
74 1hzh_H IGG, immunoglobulin hea 99.5 6.2E-14 2.1E-18 101.7 7.1 138 1-143 198-399 (457)
75 2c5d_C AXL oncogene, tyrosine- 99.5 7.3E-13 2.5E-17 85.5 11.4 105 1-127 72-177 (195)
76 2j8h_A Titin, connectin; cardi 99.5 6E-13 2.1E-17 85.9 11.0 95 47-144 3-147 (197)
77 1igy_B IGG1 intact antibody MA 99.5 6.5E-14 2.2E-18 101.0 6.2 137 2-143 185-380 (434)
78 3k0w_A Mucosa-associated lymph 99.5 1E-12 3.5E-17 86.6 11.2 96 47-145 17-162 (218)
79 2rik_A Titin; I-SET IG fold, p 99.5 2.2E-12 7.6E-17 87.7 13.1 96 46-144 3-142 (284)
80 2vr9_A Roundabout 1, ROBO; imm 99.5 7E-13 2.4E-17 86.9 10.1 95 46-143 7-151 (217)
81 2v44_A NCAM2, neural cell adhe 99.5 1.2E-12 4E-17 84.1 10.8 108 1-128 62-173 (189)
82 2wv3_A Neuroplastin; igcam, me 99.4 1.9E-12 6.6E-17 83.2 11.6 109 1-127 60-175 (190)
83 1epf_A NCAM, protein (neural c 99.4 1.1E-12 3.6E-17 84.4 10.3 108 1-128 66-177 (191)
84 2v44_A NCAM2, neural cell adhe 99.4 7.2E-13 2.5E-17 85.1 9.2 86 58-144 10-139 (189)
85 1rhf_A Tyrosine-protein kinase 99.4 7.6E-13 2.6E-17 84.5 9.2 103 1-127 64-167 (182)
86 1qz1_A Neural cell adhesion mo 99.4 1.3E-12 4.3E-17 89.1 10.7 95 48-144 2-143 (291)
87 3lcy_A Titin; A-BAND, IG tande 99.4 1.1E-12 3.9E-17 84.4 9.4 95 47-144 6-146 (197)
88 1iga_A IGA1; immunoglobulin; N 99.4 9.2E-13 3.2E-17 96.1 9.7 138 2-144 195-395 (475)
89 2v5t_A NCAM2, N-CAM 2, neural 99.4 1E-12 3.5E-17 84.2 8.9 94 48-144 2-141 (189)
90 2iep_A Muscle-specific kinase 99.4 1.7E-12 5.9E-17 83.4 9.6 107 1-127 66-174 (192)
91 3k0w_A Mucosa-associated lymph 99.4 6.1E-12 2.1E-16 82.8 12.2 116 1-127 69-186 (218)
92 2v9r_A Roundabout homolog 1; p 99.4 1.3E-12 4.3E-17 85.2 8.7 95 47-144 8-155 (212)
93 2wv3_A Neuroplastin; igcam, me 99.4 3.1E-12 1.1E-16 82.3 10.3 92 47-142 2-135 (190)
94 4fa8_A Secreted protein BARF1; 99.4 1.7E-13 5.9E-18 89.8 3.8 83 59-142 2-147 (203)
95 2jll_A NCAM2, neural cell adhe 99.4 3.4E-12 1.2E-16 90.4 10.5 94 49-145 2-144 (389)
96 2yd9_A Receptor-type tyrosine- 99.4 3E-12 1E-16 88.0 9.8 96 46-144 4-151 (304)
97 2nzi_A Titin; IG-domain, FNIII 99.4 6E-12 2.1E-16 86.4 10.4 95 47-144 3-147 (305)
98 3b5h_A Cervical EMMPRIN, HAB18 99.4 9.8E-12 3.3E-16 79.5 10.6 85 60-145 8-131 (184)
99 3rbs_A Myomesin-1; immunoglobu 99.4 5.9E-12 2E-16 82.6 9.7 85 59-145 11-161 (207)
100 2ifg_A High affinity nerve gro 99.4 7.6E-13 2.6E-17 93.0 5.7 112 8-143 136-288 (347)
101 2a38_A Titin; Z1Z2, structural 99.4 1.7E-12 5.9E-17 83.5 6.9 109 1-127 67-180 (194)
102 3sbw_C Programmed cell death 1 99.4 3.5E-12 1.2E-16 83.7 8.3 110 1-127 84-196 (222)
103 2va4_A NCAM2, N-CAM 2, neural 99.4 5.4E-12 1.9E-16 80.9 9.0 90 48-139 2-132 (192)
104 2yd1_A Tyrosine-protein phosph 99.3 5.6E-12 1.9E-16 82.5 8.9 114 1-127 68-184 (212)
105 1iga_A IGA1; immunoglobulin; N 99.3 8E-12 2.7E-16 91.1 10.5 76 1-88 84-167 (475)
106 2yd6_A PTPRD protein; hydrolas 99.3 6.3E-12 2.1E-16 82.3 8.9 113 1-127 67-188 (212)
107 3rbs_A Myomesin-1; immunoglobu 99.3 1.2E-11 3.9E-16 81.2 10.1 116 1-127 65-192 (207)
108 2gi7_A GPVI protein; IG-like d 99.3 2.5E-11 8.4E-16 77.9 11.3 109 1-127 56-165 (184)
109 2jll_A NCAM2, neural cell adhe 99.3 6.7E-12 2.3E-16 88.9 9.3 76 1-93 67-142 (389)
110 1dr9_A B7-1 (CD80), T lymphocy 99.3 2.7E-11 9.2E-16 78.5 11.4 110 1-127 69-186 (201)
111 1fnl_A Low affinity immunoglob 99.3 3.2E-11 1.1E-15 76.7 11.3 92 47-142 6-130 (175)
112 3sgj_C Human FCG3A receptor; r 99.3 2.6E-11 8.7E-16 79.3 11.0 92 47-142 6-130 (204)
113 1hng_A CD2; T lymphocyte adhes 99.3 2.1E-11 7.3E-16 77.9 10.1 96 1-127 65-161 (176)
114 2d3v_A Leukocyte immunoglobuli 99.3 7E-12 2.4E-16 81.2 7.8 108 1-127 62-177 (196)
115 3nl4_L Antigen binding fragmen 99.3 3.3E-12 1.1E-16 83.5 6.3 80 1-93 75-157 (213)
116 2v5t_A NCAM2, N-CAM 2, neural 99.3 8E-12 2.8E-16 79.9 7.8 109 1-127 61-173 (189)
117 2wim_A N-CAM 2, NCAM2, neural 99.3 8.8E-12 3E-16 85.0 8.4 95 47-144 3-141 (291)
118 3jz7_A MCAR, CAR, coxsackievir 99.3 8.5E-12 2.9E-16 81.2 7.7 107 1-127 88-197 (214)
119 3s97_C Contactin-1; carbonic a 99.3 1E-11 3.5E-16 80.1 7.7 85 58-143 16-155 (201)
120 2v9r_A Roundabout homolog 1; p 99.3 8E-12 2.7E-16 81.3 7.3 108 1-127 76-186 (212)
121 3r4d_A CEA-related cell adhesi 99.3 7E-11 2.4E-15 76.8 11.6 107 1-127 75-184 (208)
122 2vr9_A Roundabout 1, ROBO; imm 99.3 6E-12 2E-16 82.4 6.2 112 1-127 73-191 (217)
123 1ugn_A LIR1, leukocyte immunog 99.3 2.8E-11 9.7E-16 78.4 9.3 109 1-128 62-179 (198)
124 2j8h_A Titin, connectin; cardi 99.3 6.9E-12 2.4E-16 80.9 6.3 112 1-127 66-182 (197)
125 2nzi_A Titin; IG-domain, FNIII 99.3 1.8E-11 6.1E-16 84.0 8.7 79 1-91 66-144 (305)
126 4f80_A Butyrophilin subfamily 99.3 8.9E-12 3.1E-16 82.3 7.0 108 1-127 87-198 (226)
127 1f97_A Junction adhesion molec 99.3 4E-11 1.4E-15 77.9 9.7 107 1-127 69-190 (212)
128 1f2q_A High affinity immunoglo 99.3 1.7E-11 5.9E-16 78.0 7.7 93 47-143 3-128 (176)
129 3grw_A Fibroblast growth facto 99.3 4.7E-11 1.6E-15 79.3 10.1 87 58-145 23-162 (241)
130 3mj8_L Stimulatory hamster ant 99.3 8.2E-12 2.8E-16 81.6 6.2 81 1-93 74-158 (213)
131 3lcy_A Titin; A-BAND, IG tande 99.3 1.2E-11 4.1E-16 79.6 6.9 78 1-93 67-145 (197)
132 3bp6_B Programmed cell death 1 99.3 1.1E-11 3.7E-16 80.5 6.5 108 1-127 71-178 (202)
133 2fbo_J V1V2;, variable region- 99.3 1.5E-11 5.1E-16 82.0 7.4 80 1-92 94-177 (250)
134 2pet_A Lutheran blood group gl 99.3 1.7E-11 5.8E-16 80.9 7.5 81 1-94 81-163 (231)
135 1uct_A Immunoglobulin alpha FC 99.3 2.3E-11 7.7E-16 80.4 8.0 109 1-127 68-178 (218)
136 3ejj_X Macrophage colony-stimu 99.3 4.5E-11 1.5E-15 81.3 9.5 111 1-127 148-266 (289)
137 3rjd_A High affinity immunoglo 99.2 6E-11 2E-15 79.6 9.9 91 49-143 2-125 (262)
138 2r15_A Myomesin-1; sarcomeric 99.2 3.1E-11 1E-15 78.6 8.2 119 1-127 63-195 (212)
139 1f97_A Junction adhesion molec 99.2 2E-11 6.9E-16 79.4 7.2 85 58-143 9-148 (212)
140 1fnl_A Low affinity immunoglob 99.2 1.6E-10 5.3E-15 73.5 11.1 100 1-127 58-158 (175)
141 3nl4_L Antigen binding fragmen 99.2 1E-10 3.5E-15 76.4 10.5 86 58-143 9-157 (213)
142 2va4_A NCAM2, N-CAM 2, neural 99.2 4.8E-11 1.6E-15 76.5 8.6 109 1-127 62-178 (192)
143 3tv3_L PGT128 light chain, IG 99.2 1E-11 3.4E-16 81.1 5.4 81 1-93 72-155 (211)
144 3sgj_C Human FCG3A receptor; r 99.2 1.3E-10 4.5E-15 75.9 10.8 73 1-93 58-131 (204)
145 1q0x_L FAB 9B1, light chain; a 99.2 1.3E-11 4.5E-16 80.6 6.0 81 1-93 77-159 (212)
146 3s97_C Contactin-1; carbonic a 99.2 5E-11 1.7E-15 76.8 8.6 114 1-127 70-186 (201)
147 1vca_A VCAM-D1,2, human vascul 99.2 8.9E-12 3.1E-16 81.3 5.0 75 1-93 58-136 (202)
148 3d9a_L Light chain of hyhel10 99.2 1.7E-11 5.8E-16 80.1 6.3 81 1-94 75-157 (213)
149 2d3v_A Leukocyte immunoglobuli 99.2 4E-11 1.4E-15 77.6 7.9 89 47-142 4-139 (196)
150 3p2t_A Leukocyte immunoglobuli 99.2 2.5E-11 8.5E-16 78.5 6.9 108 1-127 62-176 (196)
151 3r06_A Anti-mouse CD3epsilon a 99.2 1.4E-11 4.7E-16 80.5 5.8 80 1-93 75-156 (213)
152 3ry4_A Low affinity immunoglob 99.2 8.9E-11 3E-15 74.0 9.1 92 48-143 4-128 (170)
153 1nbq_A JAM, junctional adhesio 99.2 3E-11 1E-15 78.3 7.1 86 58-144 12-151 (209)
154 1nkr_A P58-CL42 KIR; inhibitor 99.2 9.4E-11 3.2E-15 76.2 9.4 76 1-91 67-146 (201)
155 1zvo_C Myeloma immunoglobulin 99.2 1.4E-10 4.9E-15 85.5 11.3 77 1-87 84-174 (512)
156 1nbq_A JAM, junctional adhesio 99.2 2.9E-11 9.8E-16 78.4 6.8 78 1-94 72-151 (209)
157 1oll_A NK receptor; immune sys 99.2 5.9E-11 2E-15 76.4 8.1 108 1-127 61-170 (188)
158 1f2q_A High affinity immunoglo 99.2 1.6E-10 5.3E-15 73.5 10.0 100 1-127 55-155 (176)
159 3ojm_B Fibroblast growth facto 99.2 6.7E-11 2.3E-15 77.8 8.3 85 58-143 27-164 (231)
160 1lk3_L 9D7 light chain; antige 99.2 2.6E-11 8.9E-16 79.1 6.1 80 1-93 74-155 (210)
161 3qib_D 2B4 beta chain; IG doma 99.2 7.7E-11 2.6E-15 79.9 8.2 60 4-86 3-62 (270)
162 1mq8_A ICAM-1, intercellular a 99.2 3.7E-11 1.3E-15 82.7 6.4 118 10-143 61-233 (291)
163 3ry4_A Low affinity immunoglob 99.2 4.1E-10 1.4E-14 70.9 10.8 99 2-127 56-155 (170)
164 2o26_X MAST/stem cell growth f 99.2 4.4E-11 1.5E-15 81.6 6.6 78 1-89 149-228 (290)
165 2if7_A SLAM family member 6; N 99.2 1.1E-10 3.8E-15 75.5 8.0 101 1-127 74-177 (193)
166 3pv7_A B7-H6, IG-like domain-c 99.2 1.4E-10 4.6E-15 77.6 8.7 71 1-88 86-158 (248)
167 2xzc_L FAB A.17 light chain; i 99.2 4.4E-11 1.5E-15 78.4 6.0 80 1-93 76-158 (216)
168 2x1w_L Vascular endothelial gr 99.2 7.1E-11 2.4E-15 77.4 6.9 76 1-88 68-145 (213)
169 3ojm_B Fibroblast growth facto 99.2 1.2E-10 4.2E-15 76.6 8.0 75 1-86 80-154 (231)
170 2gi7_A GPVI protein; IG-like d 99.2 3.3E-10 1.1E-14 72.6 9.9 91 46-143 6-134 (184)
171 3s96_B 3B5H10 FAB light chain; 99.2 3.2E-11 1.1E-15 79.0 5.2 81 1-93 79-165 (218)
172 3sob_L Antibody light chain; b 99.2 3.7E-11 1.3E-15 79.6 5.4 80 1-93 98-179 (237)
173 1itb_B Type 1 interleukin-1 re 99.2 7.8E-11 2.7E-15 81.2 7.2 84 1-94 166-252 (315)
174 3grw_A Fibroblast growth facto 99.2 2.1E-10 7.2E-15 76.1 9.0 75 1-86 76-150 (241)
175 2zg1_A Sialic acid-binding IG- 99.2 3.1E-10 1.1E-14 74.0 9.7 106 1-127 86-198 (214)
176 4frw_A Poliovirus receptor-rel 99.2 1.5E-10 5.3E-15 75.1 8.1 108 1-127 83-196 (218)
177 3p2t_A Leukocyte immunoglobuli 99.2 2.4E-10 8.1E-15 73.9 8.9 89 47-142 4-139 (196)
178 4fqp_A Poliovirus receptor; im 99.2 1.9E-10 6.4E-15 79.4 8.8 106 2-126 182-288 (313)
179 2r15_A Myomesin-1; sarcomeric 99.1 5.1E-10 1.8E-14 72.8 10.0 39 107-145 123-161 (212)
180 1hnf_A CD2; T lymphocyte adhes 99.1 2.2E-10 7.4E-15 73.7 8.1 96 1-127 70-166 (182)
181 1nqb_A Single-chain antibody f 99.1 1.9E-10 6.4E-15 77.6 8.1 72 1-87 83-163 (256)
182 4i0k_A CD276 antigen; immunogl 99.1 9.2E-11 3.1E-15 77.0 6.2 111 1-127 76-191 (222)
183 1zvo_C Myeloma immunoglobulin 99.1 8.7E-10 3E-14 81.3 12.0 30 115-144 414-446 (512)
184 3r06_A Anti-mouse CD3epsilon a 99.1 7.4E-10 2.5E-14 72.2 10.4 87 58-144 9-157 (213)
185 3bqu_C 3H6 FAB light chain; be 99.1 3.6E-11 1.2E-15 79.6 4.2 80 1-93 97-178 (233)
186 1moe_A Anti-CEA MAB T84.66; an 99.1 2.9E-10 1E-14 75.5 8.6 78 1-87 79-158 (240)
187 1uct_A Immunoglobulin alpha FC 99.1 6.4E-10 2.2E-14 73.4 9.8 91 46-142 7-146 (218)
188 2ghw_B Anti-SARS SCFV antibody 99.1 1.9E-10 6.5E-15 76.8 7.4 84 1-86 85-171 (247)
189 3b5h_A Cervical EMMPRIN, HAB18 99.1 6.5E-10 2.2E-14 70.9 9.4 102 5-127 57-168 (184)
190 1c1e_H Catalytic antibody 1E9 99.1 8.8E-11 3E-15 77.1 5.4 79 1-91 83-166 (219)
191 1nfd_E H57 FAB; complex (immun 99.1 4.9E-11 1.7E-15 77.9 4.1 116 1-128 73-198 (212)
192 2c1o_A IGK-C protein; FAB frag 99.1 8E-11 2.7E-15 79.0 5.2 81 1-94 117-199 (254)
193 2p1y_A Bispecific alpha/beta T 99.1 3.4E-10 1.2E-14 75.1 8.2 84 1-87 77-164 (238)
194 3umt_A SCFV heavy chain and li 99.1 3.4E-10 1.2E-14 76.1 8.2 85 1-87 85-175 (256)
195 1vca_A VCAM-D1,2, human vascul 99.1 2.6E-10 8.9E-15 74.3 7.4 83 60-143 11-136 (202)
196 1b6u_A KIR2DL3, P58 killer cel 99.1 4.4E-10 1.5E-14 76.1 8.7 77 1-92 66-146 (257)
197 3uzq_A Anti-dengue MAB 4E11; d 99.1 1.9E-10 6.6E-15 77.2 6.9 85 1-87 84-174 (253)
198 4acp_A IG gamma-1 chain C regi 99.1 2.7E-10 9.2E-15 76.4 7.5 113 10-142 1-173 (240)
199 2rgs_A I, IG gamma-2B heavy ch 99.1 1.5E-10 5E-15 76.3 6.1 94 47-143 8-161 (218)
200 3bkj_L WO2 IGG2A FAB fragment 99.1 1.1E-10 3.8E-15 78.3 5.5 80 1-93 113-194 (252)
201 1ry7_B FGFR-3, fibroblast grow 99.1 1.2E-10 4.1E-15 80.9 5.8 76 1-87 184-259 (334)
202 3d9a_L Light chain of hyhel10 99.1 1E-09 3.5E-14 71.5 9.9 87 58-144 9-157 (213)
203 1ugn_A LIR1, leukocyte immunog 99.1 7.8E-10 2.7E-14 71.5 9.3 90 47-143 4-141 (198)
204 3u83_A Poliovirus receptor-rel 99.1 2.3E-10 7.8E-15 79.3 7.1 106 2-127 199-305 (331)
205 1jbj_A CD3 epsilon and gamma e 99.1 4E-10 1.4E-14 72.5 7.8 116 1-127 48-174 (186)
206 4f80_A Butyrophilin subfamily 99.1 4.8E-10 1.6E-14 73.9 8.3 37 109-145 126-163 (226)
207 1gsm_A Madcam-1, mucosal addre 99.1 1.5E-10 5.2E-15 76.0 5.7 74 1-93 63-141 (210)
208 2oz4_A Intercellular adhesion 99.1 1.4E-10 4.7E-15 78.3 5.6 100 2-127 147-249 (265)
209 1pz5_B Heavy chain of FAB (SYA 99.1 1.5E-10 5.2E-15 76.1 5.5 78 1-89 85-166 (220)
210 1oll_A NK receptor; immune sys 99.1 2.6E-09 9E-14 68.6 11.2 89 47-142 3-138 (188)
211 3d9a_H Heavy chain of hyhel10 99.1 1.5E-10 5E-15 75.6 5.2 75 1-88 82-158 (210)
212 3oq3_B IFN-alpha/beta binding 99.1 6.4E-10 2.2E-14 77.4 8.7 74 1-91 186-272 (329)
213 1p6f_A NKP46, natural cytotoxi 99.1 7.4E-10 2.5E-14 74.3 8.6 107 1-126 64-172 (242)
214 3bp6_B Programmed cell death 1 99.1 1.2E-09 4.1E-14 70.7 9.3 85 58-142 10-144 (202)
215 1q9r_B S25-2 FAB (IGG1K) heavy 99.1 1.4E-10 4.7E-15 76.3 4.9 79 1-91 85-169 (222)
216 2j6e_L IGM, FAB light chain; a 99.1 3.8E-11 1.3E-15 79.5 2.1 81 1-93 95-179 (234)
217 1nkr_A P58-CL42 KIR; inhibitor 99.1 1.2E-09 4.2E-14 70.9 9.3 90 46-142 6-147 (201)
218 3juy_B 3B3 single chain varian 99.1 7.5E-10 2.6E-14 74.4 8.2 84 1-86 89-186 (256)
219 1ccz_A Protein (CD58); LFA-3, 99.0 7.2E-10 2.5E-14 70.5 7.5 93 1-127 64-156 (171)
220 3vh8_G Killer cell immunoglobu 99.0 7E-10 2.4E-14 76.7 8.0 76 1-91 178-257 (316)
221 2vol_A Murine IGG FC; FC, zinc 99.0 1.6E-10 5.3E-15 75.5 4.4 80 1-93 72-153 (207)
222 2y25_A Myomesin; structural pr 99.0 7.8E-11 2.7E-15 81.1 3.0 95 46-144 5-151 (317)
223 4fom_A Poliovirus receptor-rel 99.0 3.1E-10 1.1E-14 78.0 5.9 108 1-126 176-284 (308)
224 4frw_A Poliovirus receptor-rel 99.0 5.9E-10 2E-14 72.4 7.0 36 108-143 125-160 (218)
225 4dep_C Interleukin-1 receptor 99.0 1.4E-10 4.7E-15 81.1 4.2 86 1-94 181-273 (349)
226 3gkz_A Anti-methamphetamine si 99.0 7.7E-10 2.6E-14 74.4 7.7 84 1-86 90-178 (257)
227 3knb_A Titin; IG-like, titin, 99.0 2.2E-10 7.6E-15 66.6 4.2 47 100-146 4-50 (100)
228 2x1w_L Vascular endothelial gr 99.0 1E-09 3.5E-14 71.9 7.8 83 58-141 15-147 (213)
229 3esu_F Antibody 14B7* light ch 99.0 7.7E-10 2.6E-14 74.0 7.1 85 1-87 78-170 (250)
230 3mj8_L Stimulatory hamster ant 99.0 1.6E-09 5.3E-14 70.7 8.4 86 59-144 9-159 (213)
231 2rgs_A I, IG gamma-2B heavy ch 99.0 3.5E-10 1.2E-14 74.4 5.3 80 1-93 80-161 (218)
232 1lk3_L 9D7 light chain; antige 99.0 2.8E-09 9.5E-14 69.4 9.5 30 58-87 8-37 (210)
233 2pet_A Lutheran blood group gl 99.0 1.5E-09 5.2E-14 71.4 8.3 89 58-146 8-165 (231)
234 2ny1_B T-cell surface glycopro 99.0 1.5E-09 5.2E-14 69.3 8.1 83 59-142 4-138 (184)
235 3knb_B Obscurin-like protein 1 99.0 4.9E-10 1.7E-14 65.9 5.3 48 99-146 11-58 (107)
236 2dru_A Chimera of CD48 antigen 99.0 1.4E-09 4.9E-14 69.6 7.6 93 1-127 73-166 (180)
237 2ny1_B T-cell surface glycopro 99.0 6.4E-10 2.2E-14 71.0 6.0 93 1-127 72-164 (184)
238 1qok_A MFE-23 recombinant anti 99.0 1.4E-09 4.7E-14 74.3 8.0 84 1-87 109-198 (282)
239 2znx_A SCFV; fluorotryptohpan, 99.0 8.1E-10 2.8E-14 73.7 6.6 85 1-87 75-161 (242)
240 3pl6_D MBP peptide / T-cell re 99.0 4.1E-10 1.4E-14 76.2 5.2 84 1-93 104-190 (268)
241 3sob_L Antibody light chain; b 99.0 3.2E-09 1.1E-13 70.2 9.3 29 58-86 32-60 (237)
242 2wng_A Tyrosine-protein phosph 99.0 2.8E-09 9.5E-14 73.9 9.3 86 58-143 11-161 (327)
243 3o4o_C Interleukin-1 receptor 99.0 3.6E-10 1.2E-14 78.7 4.8 81 1-92 184-271 (339)
244 4dzb_B Vbeta2 (MAIT T cell rec 99.0 4E-10 1.4E-14 75.2 4.7 85 1-94 81-170 (246)
245 3auv_A SC-DSFV derived from th 99.0 1.3E-09 4.4E-14 74.2 7.3 85 1-87 86-173 (276)
246 1q0x_L FAB 9B1, light chain; a 99.0 2.1E-09 7.2E-14 70.1 8.1 30 58-87 8-40 (212)
247 3omz_A Human vdelta1 gamma del 99.0 2.5E-09 8.7E-14 71.9 8.7 85 1-87 83-174 (259)
248 1f3r_B FV antibody fragment; I 99.0 6.9E-10 2.4E-14 74.7 5.8 84 1-86 82-175 (257)
249 3sbw_C Programmed cell death 1 99.0 4.7E-09 1.6E-13 68.7 9.7 31 112-142 127-157 (222)
250 3mj6_A Junctional adhesion mol 99.0 1.7E-09 5.9E-14 72.8 7.7 69 1-89 88-160 (268)
251 1mju_H Immunoglobulin MS6-12; 99.0 4E-10 1.4E-14 74.6 4.5 79 1-91 83-163 (227)
252 1svz_A Immunoglobulin;, single 99.0 1.9E-09 6.6E-14 71.9 7.6 85 1-87 80-166 (247)
253 3eow_R Poliovirus receptor; im 99.0 2.5E-10 8.7E-15 75.0 3.2 71 1-87 82-154 (221)
254 3mjg_X Beta-type platelet-deri 99.0 1.1E-09 3.8E-14 74.6 6.5 70 5-87 149-218 (289)
255 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.0 3.4E-09 1.2E-13 71.3 8.8 83 1-86 80-172 (256)
256 1dee_B IGM RF 2A2; FAB-IBP com 99.0 9.5E-10 3.2E-14 72.6 5.9 80 1-92 83-170 (223)
257 2vol_A Murine IGG FC; FC, zinc 99.0 1.1E-09 3.7E-14 71.5 6.1 81 62-143 15-153 (207)
258 2y23_A Myomesin; structural pr 99.0 1.9E-09 6.6E-14 73.9 7.6 86 59-145 10-152 (312)
259 1c5d_H Monoclonal antibody aga 99.0 8.6E-10 2.9E-14 72.4 5.5 79 1-91 82-164 (215)
260 3nfj_J T cell receptor beta ch 99.0 9.2E-10 3.2E-14 73.4 5.6 85 1-94 78-169 (245)
261 3q5y_A TCR N15 beta; IG, T cel 99.0 9.9E-10 3.4E-14 73.1 5.7 84 1-93 79-166 (240)
262 1op3_H FAB 2G12, heavy chain; 99.0 8.4E-10 2.9E-14 72.9 5.3 78 1-91 83-170 (225)
263 3o3u_N Maltose-binding peripla 98.9 3.4E-09 1.2E-13 79.0 8.8 79 1-94 436-516 (581)
264 1bec_A 14.3.D T cell antigen r 98.9 1.1E-09 3.9E-14 72.9 5.7 84 1-93 76-165 (238)
265 4dkd_C Macrophage colony-stimu 98.9 1.4E-09 4.7E-14 74.1 6.1 111 1-127 148-266 (292)
266 2fbj_H IGA-kappa J539 FAB (hea 98.9 7.1E-10 2.4E-14 73.1 4.2 79 1-92 83-166 (220)
267 1l6x_A Immunoglobulin gamma-1 98.9 2.3E-09 7.7E-14 69.9 6.5 29 115-143 123-153 (207)
268 3bae_H WO2 IGG2A FAB fragment 98.9 1E-09 3.6E-14 72.6 4.8 76 1-87 84-169 (228)
269 2fbo_J V1V2;, variable region- 98.9 3.2E-09 1.1E-13 70.7 7.2 35 108-142 143-177 (250)
270 3r4d_A CEA-related cell adhesi 98.9 1.8E-08 6.1E-13 65.3 10.5 82 59-143 8-151 (208)
271 3qib_D 2B4 beta chain; IG doma 98.9 1.7E-09 5.6E-14 73.3 5.5 85 1-94 105-194 (270)
272 1sy6_A T-cell surface glycopro 98.9 4.7E-09 1.6E-13 68.5 7.5 29 114-144 126-154 (204)
273 4fmk_A Poliovirus receptor-rel 98.9 4.7E-09 1.6E-13 68.3 7.4 112 1-127 87-202 (225)
274 1p6f_A NKP46, natural cytotoxi 98.9 3.2E-08 1.1E-12 66.3 11.6 90 46-142 5-141 (242)
275 1c1e_H Catalytic antibody 1E9 98.9 7.8E-09 2.7E-13 67.7 8.4 29 113-141 136-166 (219)
276 1nfd_E H57 FAB; complex (immun 98.9 2E-09 7E-14 70.1 5.5 87 58-144 7-158 (212)
277 4ei6_B Vbeta16 XV19 type II na 98.9 2.4E-09 8.3E-14 71.3 6.0 85 1-94 80-169 (245)
278 1i1c_A IGG2A, IG gamma-2A chai 98.9 2.7E-09 9.1E-14 71.4 6.1 82 62-143 29-167 (239)
279 2gjj_A A21 single-chain antibo 98.9 7E-09 2.4E-13 70.2 8.3 85 1-87 85-177 (264)
280 3m8o_H Immunoglobulin A1 heavy 98.9 1.9E-09 6.4E-14 70.9 5.2 78 1-92 85-167 (221)
281 3ux9_B SCFV antibody; five hel 98.9 6.9E-09 2.4E-13 69.6 8.0 84 1-87 78-173 (256)
282 1gsm_A Madcam-1, mucosal addre 98.9 8.2E-09 2.8E-13 67.7 8.1 80 60-143 17-141 (210)
283 1x9q_A SCFV, 4M5.3 anti-fluore 98.9 3.3E-09 1.1E-13 71.8 6.4 81 1-87 94-190 (268)
284 2gki_A Nuclease; anti-DNA anti 98.9 4.4E-09 1.5E-13 72.2 6.7 85 1-87 105-202 (291)
285 3nl4_H Antigen binding fragmen 98.9 1.5E-09 5E-14 71.1 4.1 78 1-90 79-161 (215)
286 4dzb_B Vbeta2 (MAIT T cell rec 98.9 1E-08 3.4E-13 68.3 8.2 29 58-86 9-37 (246)
287 3liz_H 4C3 monoclonal antibody 98.9 2.8E-09 9.7E-14 71.6 5.4 77 1-88 83-164 (253)
288 2ifg_A High affinity nerve gro 98.9 3.3E-10 1.1E-14 79.5 0.8 72 1-93 216-288 (347)
289 3bkj_L WO2 IGG2A FAB fragment 98.9 1.9E-08 6.6E-13 67.3 9.3 38 49-88 35-77 (252)
290 1ow0_A IG alpha-1 chain C regi 98.9 2.8E-09 9.4E-14 70.0 5.0 81 1-94 70-152 (214)
291 3bqu_C 3H6 FAB light chain; be 98.9 2.8E-09 9.6E-14 70.4 5.0 30 58-87 31-60 (233)
292 2p1y_A Bispecific alpha/beta T 98.9 2.8E-08 9.6E-13 65.8 9.9 33 107-139 133-165 (238)
293 1oga_E TRBC1, T-cell receptor 98.8 4.4E-09 1.5E-13 70.6 5.8 84 1-93 80-167 (252)
294 1dn0_B IGM-kappa cold agglutin 98.8 7.3E-09 2.5E-13 68.8 6.7 81 1-93 82-171 (232)
295 3s96_B 3B5H10 FAB light chain; 98.8 2.9E-08 1E-12 64.7 9.3 28 59-86 9-37 (218)
296 3to4_D NKT vbeta2 (mouse varia 98.8 3.7E-09 1.3E-13 71.0 5.1 85 1-94 78-169 (253)
297 2wbj_D OB TCR; transmembrane, 98.8 1.5E-09 5.1E-14 74.0 3.1 84 1-93 104-194 (279)
298 1b6u_A KIR2DL3, P58 killer cel 98.8 1.5E-08 5.1E-13 68.5 7.8 92 46-143 5-147 (257)
299 3pv7_A B7-H6, IG-like domain-c 98.8 1.9E-08 6.4E-13 67.1 8.2 82 58-140 11-159 (248)
300 2xqy_G A13-D6.3 monoclonal ant 98.8 5.4E-09 1.8E-13 70.8 5.4 79 1-91 89-171 (261)
301 1iam_A ICAM-1, CD54, intercell 98.8 8.4E-08 2.9E-12 61.7 10.3 105 2-126 55-162 (185)
302 1i1c_A IGG2A, IG gamma-2A chai 98.8 4.2E-09 1.4E-13 70.4 4.4 80 1-93 86-167 (239)
303 2wqr_A IG epsilon chain C regi 98.8 4.8E-09 1.7E-13 72.7 4.8 80 1-93 182-263 (323)
304 3jz7_A MCAR, CAR, coxsackievir 98.8 7.1E-09 2.4E-13 67.2 5.2 29 112-140 132-161 (214)
305 2w59_A IGY FCU3-4; immunoglobu 98.8 1E-08 3.4E-13 68.1 6.0 34 58-92 21-57 (231)
306 2ghw_B Anti-SARS SCFV antibody 98.8 7.9E-08 2.7E-12 64.0 10.4 34 104-137 138-171 (247)
307 3esu_F Antibody 14B7* light ch 98.8 7.5E-08 2.6E-12 64.2 10.3 30 58-87 12-41 (250)
308 3fku_X Neutralizing antibody F 98.8 1.1E-08 3.7E-13 69.8 6.1 83 1-86 83-177 (280)
309 2aty_A Complement receptor chi 98.8 2.4E-08 8.3E-13 70.9 8.1 81 62-142 180-317 (376)
310 3tv3_L PGT128 light chain, IG 98.8 2.4E-08 8.1E-13 65.0 7.4 43 101-143 111-155 (211)
311 1sy6_A T-cell surface glycopro 98.8 1E-08 3.5E-13 66.9 5.6 57 64-127 127-188 (204)
312 3d9a_H Heavy chain of hyhel10 98.8 2E-08 6.8E-13 65.4 7.0 30 112-141 129-160 (210)
313 2xzc_L FAB A.17 light chain; i 98.8 4E-08 1.4E-12 64.1 8.4 30 115-144 128-159 (216)
314 3bn9_D E2 FAB heavy chain; ant 98.8 3.2E-09 1.1E-13 71.8 3.1 79 1-91 83-175 (257)
315 2kdg_A Myotilin; immonoglobuli 98.8 1.1E-08 3.7E-13 58.9 4.9 48 99-146 3-50 (100)
316 4i0k_A CD276 antigen; immunogl 98.8 5.7E-08 2E-12 63.5 8.7 39 102-141 112-151 (222)
317 3qp3_A Titin; I-SET IG-like, s 98.8 2E-08 6.8E-13 58.1 5.7 47 99-145 6-52 (103)
318 1g1c_A Immunoglobulin-like dom 98.7 2.2E-08 7.6E-13 57.4 5.7 45 100-144 4-48 (99)
319 1jbj_A CD3 epsilon and gamma e 98.7 6.1E-08 2.1E-12 62.2 8.4 28 113-143 119-146 (186)
320 3auv_A SC-DSFV derived from th 98.7 1.1E-07 3.9E-12 64.5 10.1 37 49-87 13-49 (276)
321 1wit_A Twitchin 18TH IGSF modu 98.7 1.9E-08 6.4E-13 57.3 5.3 40 100-139 1-40 (93)
322 1moe_A Anti-CEA MAB T84.66; an 98.7 1E-07 3.4E-12 63.2 9.5 81 58-138 9-158 (240)
323 1u2h_A APEG-1, aortic preferen 98.7 2E-08 6.9E-13 57.6 5.4 45 100-144 4-48 (99)
324 1nqb_A Single-chain antibody f 98.7 2.1E-07 7.1E-12 62.6 11.1 35 106-140 126-167 (256)
325 1hxm_B Gamma-delta T-cell rece 98.7 1.2E-08 4.1E-13 68.1 4.8 82 1-89 84-173 (242)
326 3q5y_A TCR N15 beta; IG, T cel 98.7 1.5E-07 5.1E-12 62.4 9.5 28 58-86 10-37 (240)
327 3omz_A Human vdelta1 gamma del 98.7 9.6E-08 3.3E-12 64.2 8.6 36 103-138 138-174 (259)
328 2w59_A IGY FCU3-4; immunoglobu 98.7 2.7E-08 9.2E-13 66.0 5.7 81 1-94 81-163 (231)
329 2znx_A SCFV; fluorotryptohpan, 98.7 1.6E-07 5.3E-12 62.6 9.5 30 58-87 9-38 (242)
330 2edj_A Roundabout homolog 2; K 98.7 4.9E-08 1.7E-12 56.1 6.2 45 99-143 6-50 (100)
331 1l6x_A Immunoglobulin gamma-1 98.7 1.9E-08 6.5E-13 65.5 4.9 74 7-93 78-153 (207)
332 1hng_A CD2; T lymphocyte adhes 98.7 6.5E-08 2.2E-12 61.5 7.2 30 115-144 109-138 (176)
333 4ei6_B Vbeta16 XV19 type II na 98.7 1.6E-07 5.5E-12 62.4 9.4 28 58-86 10-37 (245)
334 2cqv_A MLCK, myosin light chai 98.7 4.8E-08 1.6E-12 57.7 6.0 46 99-144 5-50 (114)
335 2yr3_A Myosin light chain kina 98.7 2.6E-08 9E-13 57.2 4.7 46 98-143 8-53 (99)
336 3irg_A Titin; IG-like, titin, 98.7 2E-08 6.9E-13 57.6 4.2 45 100-144 4-48 (100)
337 2v9t_A Roundabout homolog 1; s 98.7 2.3E-08 8E-13 59.3 4.5 47 98-144 6-52 (117)
338 2v5y_A Receptor-type tyrosine- 98.7 2E-07 6.9E-12 71.4 10.7 77 65-142 91-208 (731)
339 3qhz_H Human monoclonal antibo 98.7 2.6E-08 9E-13 65.9 5.1 78 1-90 87-173 (232)
340 3bfo_A Mucosa-associated lymph 98.7 8.1E-08 2.8E-12 54.3 6.4 45 101-145 3-47 (91)
341 3uzq_A Anti-dengue MAB 4E11; d 98.7 2.3E-07 7.9E-12 62.1 9.5 37 102-138 134-174 (253)
342 1mju_H Immunoglobulin MS6-12; 98.7 1.8E-07 6.2E-12 61.8 8.8 30 112-141 132-163 (227)
343 2dm2_A Palladin; beta-sandwich 98.6 6.1E-08 2.1E-12 56.8 5.7 46 99-144 6-51 (110)
344 3puc_A Titin; I-SET IG-like do 98.6 6.6E-08 2.2E-12 55.4 5.7 45 100-144 5-49 (99)
345 1za6_B IGG heavy chain; immuno 98.6 9.1E-08 3.1E-12 66.9 7.4 30 112-141 131-162 (344)
346 3tf7_C 42F3 MUT7 SCFV (42F3 al 98.6 4.2E-07 1.4E-11 61.0 10.4 29 58-86 11-39 (256)
347 1dr9_A B7-1 (CD80), T lymphocy 98.6 5.2E-08 1.8E-12 62.9 5.8 30 114-143 119-149 (201)
348 1pz5_B Heavy chain of FAB (SYA 98.6 2.1E-07 7.2E-12 60.9 8.6 28 113-140 137-166 (220)
349 3irg_B Obscurin-like protein 1 98.6 5.9E-08 2E-12 56.4 5.3 47 98-144 10-56 (107)
350 1waa_A Titin; metal binding pr 98.6 8.8E-08 3E-12 54.7 5.8 45 100-145 4-48 (93)
351 2cr6_A KIAA1556 protein, obscu 98.6 5.9E-08 2E-12 57.5 5.3 45 101-145 13-57 (115)
352 2zg1_A Sialic acid-binding IG- 98.6 2.7E-07 9.1E-12 59.9 8.8 30 113-142 135-168 (214)
353 3pl6_D MBP peptide / T-cell re 98.6 2.1E-07 7.3E-12 62.7 8.5 28 58-86 34-61 (268)
354 1ypz_F T-cell receptor gamma c 98.6 3.1E-08 1.1E-12 65.6 4.3 86 1-92 83-174 (230)
355 3nfj_J T cell receptor beta ch 98.6 3.4E-07 1.2E-11 60.8 9.2 29 58-86 9-37 (245)
356 2aty_A Complement receptor chi 98.6 7.4E-08 2.5E-12 68.4 6.3 80 1-93 237-318 (376)
357 3tv3_H PGT128 heavy chain, IG 98.6 3.1E-08 1.1E-12 66.0 3.9 78 1-90 90-181 (239)
358 2lvc_A Obscurin-like protein 1 98.6 5.8E-08 2E-12 55.3 4.5 47 99-146 2-50 (91)
359 2kkq_A Myotilin; unknown funct 98.6 7.4E-08 2.5E-12 57.2 5.1 47 98-144 12-58 (116)
360 2eo9_A Roundabout homolog 1; b 98.6 7.5E-08 2.6E-12 57.1 5.0 46 99-144 6-51 (118)
361 3juy_B 3B3 single chain varian 98.6 8.8E-07 3E-11 59.3 10.7 34 104-137 152-186 (256)
362 2dm3_A KIAA0992 protein, palla 98.6 5.5E-08 1.9E-12 56.9 4.2 47 99-145 7-53 (110)
363 3knb_A Titin; IG-like, titin, 98.6 1.4E-07 4.6E-12 54.6 5.8 74 47-127 4-84 (100)
364 2j6e_L IGM, FAB light chain; a 98.6 1.3E-07 4.3E-12 62.4 6.4 30 58-87 27-58 (234)
365 2if7_A SLAM family member 6; N 98.6 4.3E-07 1.5E-11 58.5 8.6 30 58-87 6-36 (193)
366 1svz_A Immunoglobulin;, single 98.6 7.8E-07 2.7E-11 59.2 10.1 30 58-87 9-43 (247)
367 3umt_A SCFV heavy chain and li 98.6 9.3E-07 3.2E-11 59.2 10.5 38 101-138 138-175 (256)
368 1q9r_B S25-2 FAB (IGG1K) heavy 98.6 3.5E-07 1.2E-11 59.9 8.2 29 113-141 139-169 (222)
369 3u2s_H PG9 heavy chain; greek 98.6 6.8E-08 2.3E-12 64.8 4.9 76 1-87 82-180 (248)
370 2edk_A Myosin-binding protein 98.6 4.8E-08 1.6E-12 56.4 3.6 46 100-146 7-52 (101)
371 3bn3_B ICAM-5, intercellular a 98.6 2.7E-07 9.3E-12 59.8 7.4 109 1-126 56-170 (196)
372 3knb_B Obscurin-like protein 1 98.6 8.5E-08 2.9E-12 56.2 4.7 74 47-127 12-90 (107)
373 2xot_A Amphoterin-induced prot 98.6 4.5E-08 1.5E-12 69.2 4.0 56 1-83 305-360 (361)
374 4fmk_A Poliovirus receptor-rel 98.6 4.1E-07 1.4E-11 59.0 8.2 33 59-91 10-45 (225)
375 3mj6_A Junctional adhesion mol 98.6 1.1E-07 3.8E-12 63.9 5.6 32 108-139 125-159 (268)
376 1fhg_A Telokin; immunoglobulin 98.5 1.5E-07 5.1E-12 58.6 5.7 47 98-144 38-84 (154)
377 1c5d_H Monoclonal antibody aga 98.5 3.1E-07 1E-11 60.1 7.4 29 113-141 134-164 (215)
378 3kvq_A Vascular endothelial gr 98.5 8.1E-08 2.8E-12 55.9 4.1 46 99-144 8-53 (108)
379 1nct_A Titin; cell adhesion, g 98.5 6.3E-08 2.2E-12 56.6 3.4 46 99-144 12-57 (106)
380 3gkz_A Anti-methamphetamine si 98.5 1.1E-06 3.7E-11 58.8 10.0 37 102-138 142-179 (257)
381 3n9g_H FAB fragment of MAB CR4 98.5 2E-07 6.9E-12 61.6 6.1 73 1-84 83-164 (230)
382 1x44_A Myosin-binding protein 98.5 1E-07 3.4E-12 55.2 4.0 45 101-146 7-51 (103)
383 1f3r_B FV antibody fragment; I 98.5 5.1E-07 1.7E-11 60.6 7.6 29 109-137 147-175 (257)
384 2xqy_G A13-D6.3 monoclonal ant 98.5 9.8E-07 3.4E-11 59.6 9.0 30 58-87 14-45 (261)
385 2e6q_A Obscurin-like protein 1 98.5 2.8E-07 9.5E-12 54.5 5.5 44 101-146 8-51 (112)
386 3f8u_B Tapasin; endoplasmic re 98.5 1.9E-07 6.5E-12 66.7 5.6 71 1-87 258-334 (401)
387 2dlt_A Myosin binding protein 98.5 1.1E-07 3.8E-12 55.3 3.7 46 99-145 6-51 (106)
388 3qr2_A Basigin; CD147, EMMPRIN 98.5 1.7E-07 5.8E-12 57.1 4.7 45 98-142 18-62 (137)
389 2ckn_A Basic fibroblast growth 98.5 1.4E-07 4.8E-12 53.8 4.0 44 100-144 8-51 (95)
390 2lu7_A Obscurin-like protein 1 98.5 1.5E-07 5E-12 52.8 4.0 36 109-145 4-39 (84)
391 2e7b_A Obscurin; IG-like domai 98.5 2.1E-07 7.2E-12 53.8 4.8 44 99-143 6-49 (103)
392 1zxq_A ICAM-2, intercellular a 98.5 1.3E-06 4.5E-11 56.4 8.7 108 1-126 56-169 (192)
393 2yuz_A Myosin-binding protein 98.5 1.6E-07 5.6E-12 54.2 4.1 44 100-145 6-49 (100)
394 3ux9_B SCFV antibody; five hel 98.5 1.7E-06 6E-11 57.8 9.7 29 59-87 11-41 (256)
395 2fbj_H IGA-kappa J539 FAB (hea 98.5 1.1E-06 3.6E-11 57.7 8.4 30 113-142 134-166 (220)
396 3o3u_N Maltose-binding peripla 98.5 7.4E-07 2.5E-11 66.4 8.5 30 58-87 374-404 (581)
397 1ccz_A Protein (CD58); LFA-3, 98.5 8.4E-07 2.9E-11 56.2 7.6 30 59-89 4-33 (171)
398 3sob_H Antibody heavy chain, l 98.5 3.8E-07 1.3E-11 61.3 6.3 73 1-84 106-190 (256)
399 1qok_A MFE-23 recombinant anti 98.5 2.3E-06 7.8E-11 58.2 10.2 29 108-137 169-197 (282)
400 2gjj_A A21 single-chain antibo 98.5 2E-06 6.8E-11 58.1 9.8 30 58-87 13-48 (264)
401 3eow_R Poliovirus receptor; im 98.4 4.6E-07 1.6E-11 59.2 6.3 40 100-140 115-156 (221)
402 1ow0_A IG alpha-1 chain C regi 98.4 1.1E-07 3.7E-12 62.3 3.2 31 113-143 119-151 (214)
403 2wbj_D OB TCR; transmembrane, 98.4 7.7E-07 2.6E-11 60.5 7.4 30 58-87 32-61 (279)
404 3caf_A Fibroblast growth facto 98.4 1.9E-07 6.5E-12 53.6 3.8 45 100-144 3-51 (100)
405 2ens_A Advanced glycosylation 98.4 8.9E-08 3.1E-12 54.7 2.2 45 100-144 9-53 (96)
406 2cry_A KIN of IRRE-like protei 98.4 5.9E-08 2E-12 58.0 1.3 46 98-144 11-57 (122)
407 2k1m_A Myosin-binding protein 98.4 4E-07 1.4E-11 51.9 4.8 44 101-145 8-51 (95)
408 3cx2_A Myosin-binding protein 98.4 3.8E-07 1.3E-11 53.2 4.7 39 101-139 4-45 (108)
409 2eny_A Obscurin; beta-sandwich 98.4 1.5E-07 5.2E-12 54.7 2.9 47 100-146 7-54 (104)
410 2bk8_A Connectin, M1, titin he 98.4 7.8E-07 2.7E-11 50.7 5.9 41 104-144 4-45 (97)
411 1dee_B IGM RF 2A2; FAB-IBP com 98.4 1.6E-06 5.3E-11 57.0 8.0 29 114-142 139-170 (223)
412 1op3_H FAB 2G12, heavy chain; 98.4 1.2E-06 4.2E-11 57.5 7.5 29 59-87 9-39 (225)
413 2edf_A Obscurin; beta-sandwich 98.4 3.4E-07 1.2E-11 52.9 4.2 45 99-144 6-50 (103)
414 2e7c_A Myosin-binding protein 98.4 4.6E-07 1.6E-11 53.7 4.7 46 98-143 18-66 (118)
415 3iu4_H CHP3 FAB heavy chain; a 98.4 4.5E-07 1.5E-11 61.4 5.2 73 1-84 82-163 (263)
416 1x9q_A SCFV, 4M5.3 anti-fluore 98.4 3.2E-06 1.1E-10 57.0 9.3 38 48-87 15-57 (268)
417 1pd6_A Cardiac MYBP-C;, myosin 98.4 5.1E-07 1.7E-11 52.5 4.6 46 99-145 13-59 (104)
418 1ypz_E T cell receptor delta, 98.4 1.1E-06 3.7E-11 57.3 6.6 74 1-93 75-160 (207)
419 1iam_A ICAM-1, CD54, intercell 98.4 9.4E-06 3.2E-10 52.1 10.9 85 58-143 7-131 (185)
420 2e6p_A Obscurin-like protein 1 98.4 2.1E-07 7.3E-12 53.8 2.9 44 100-144 6-52 (104)
421 2v9t_A Roundabout homolog 1; s 98.4 2.9E-06 9.8E-11 50.0 7.8 79 46-127 7-93 (117)
422 2cqv_A MLCK, myosin light chai 98.4 3.6E-06 1.2E-10 49.4 8.1 74 47-127 6-84 (114)
423 3mlr_H Human monoclonal anti-H 98.4 3.2E-07 1.1E-11 60.5 3.9 73 1-84 83-165 (226)
424 4acp_A IG gamma-1 chain C regi 98.3 4.1E-07 1.4E-11 60.8 4.0 76 4-92 96-173 (240)
425 3to4_D NKT vbeta2 (mouse varia 98.3 2.4E-06 8.2E-11 57.2 7.8 29 58-86 9-37 (253)
426 3qp3_A Titin; I-SET IG-like, s 98.3 5.8E-07 2E-11 51.8 4.2 77 44-127 4-85 (103)
427 2dku_A KIAA1556 protein; beta- 98.3 8.3E-07 2.8E-11 51.2 4.8 44 100-144 7-50 (103)
428 3bfo_A Mucosa-associated lymph 98.3 6.9E-06 2.3E-10 46.2 8.4 68 49-127 4-71 (91)
429 2yuv_A Myosin-binding protein 98.3 1.1E-06 3.8E-11 50.4 5.2 44 100-144 6-50 (100)
430 3nl4_H Antigen binding fragmen 98.3 3.2E-06 1.1E-10 55.0 7.8 29 58-86 7-37 (215)
431 2gki_A Nuclease; anti-DNA anti 98.3 4.4E-06 1.5E-10 57.2 8.6 31 108-138 166-202 (291)
432 2dru_A Chimera of CD48 antigen 98.3 4.3E-06 1.5E-10 53.3 7.8 30 58-87 7-37 (180)
433 3m8o_H Immunoglobulin A1 heavy 98.3 4.2E-06 1.4E-10 54.7 8.0 29 114-142 136-167 (221)
434 3mtr_A N-CAM-1, NCAM-1, neural 98.3 1E-06 3.5E-11 57.4 4.8 46 99-145 17-62 (215)
435 3bae_H WO2 IGG2A FAB fragment 98.3 5.9E-06 2E-10 54.4 8.3 29 113-141 142-172 (228)
436 1hnf_A CD2; T lymphocyte adhes 98.2 3.9E-06 1.3E-10 53.7 7.0 28 115-142 114-141 (182)
437 1wwb_X Protein (brain derived 98.2 2E-06 6.8E-11 49.8 5.2 44 99-145 2-45 (103)
438 1oga_E TRBC1, T-cell receptor 98.2 5.8E-06 2E-10 55.3 8.1 29 58-87 11-39 (252)
439 3kvq_A Vascular endothelial gr 98.2 4.2E-06 1.4E-10 48.5 6.5 76 45-127 7-85 (108)
440 1gxe_A Myosin binding protein 98.2 7.9E-07 2.7E-11 54.6 3.3 32 108-139 25-56 (139)
441 3so5_A LIG-3, leucine-rich rep 98.2 4.3E-06 1.5E-10 48.4 6.4 46 99-144 8-55 (112)
442 1bec_A 14.3.D T cell antigen r 98.2 1.3E-05 4.5E-10 53.0 9.5 31 114-144 134-166 (238)
443 3liz_H 4C3 monoclonal antibody 98.2 9E-06 3.1E-10 54.4 8.7 29 112-140 135-165 (253)
444 1dn0_B IGM-kappa cold agglutin 98.2 9.8E-06 3.4E-10 53.6 8.7 29 114-142 138-170 (232)
445 1g1c_A Immunoglobulin-like dom 98.2 2E-06 6.7E-11 49.1 4.7 74 47-127 4-83 (99)
446 3s35_X Vascular endothelial gr 98.2 6.1E-07 2.1E-11 53.4 2.4 32 1-33 78-109 (122)
447 2dav_A SLOW MYBP-C, myosin-bin 98.2 1.8E-06 6.2E-11 52.0 4.4 38 102-139 8-48 (126)
448 2kdg_A Myotilin; immonoglobuli 98.2 1.6E-06 5.4E-11 49.6 4.0 74 47-127 4-83 (100)
449 2cr6_A KIAA1556 protein, obscu 98.2 1.9E-06 6.4E-11 50.8 4.3 75 44-125 8-89 (115)
450 2dm7_A KIAA1556 protein; beta- 98.2 1.6E-06 5.6E-11 50.4 4.0 44 99-144 6-49 (108)
451 1wit_A Twitchin 18TH IGSF modu 98.2 1.8E-06 6E-11 48.8 4.0 74 48-127 2-79 (93)
452 2kkq_A Myotilin; unknown funct 98.2 4.7E-06 1.6E-10 49.2 6.0 77 45-127 12-94 (116)
453 2lu7_A Obscurin-like protein 1 98.2 9.6E-06 3.3E-10 45.2 6.9 63 58-126 4-71 (84)
454 2lvc_A Obscurin-like protein 1 98.2 1.7E-06 5.7E-11 49.1 3.7 74 47-126 3-81 (91)
455 2dav_A SLOW MYBP-C, myosin-bin 98.2 1.7E-06 6E-11 52.1 4.0 32 1-33 79-110 (126)
456 2edj_A Roundabout homolog 2; K 98.2 4.9E-06 1.7E-10 47.5 5.8 74 47-127 7-83 (100)
457 1u2h_A APEG-1, aortic preferen 98.2 2.8E-06 9.4E-11 48.4 4.7 74 47-127 4-83 (99)
458 3r08_E T-cell surface glycopro 98.2 2.6E-06 9E-11 47.3 4.3 35 108-144 6-40 (82)
459 1waa_A Titin; metal binding pr 98.2 6.7E-06 2.3E-10 46.7 6.1 73 47-127 4-81 (93)
460 2edh_A Obscurin; structural ge 98.2 3.9E-06 1.3E-10 49.2 5.3 43 100-144 18-60 (113)
461 2yr3_A Myosin light chain kina 98.2 8.7E-07 3E-11 50.7 2.3 76 45-127 8-85 (99)
462 3bn9_D E2 FAB heavy chain; ant 98.1 5E-06 1.7E-10 56.1 6.2 29 113-141 145-175 (257)
463 3c6l_A TCR 2W20 alpha chain; T 97.4 2.7E-07 9.3E-12 59.4 0.0 77 1-94 76-153 (185)
464 1he7_A High affinity nerve gro 98.1 2.8E-06 9.5E-11 51.2 4.4 32 114-145 13-44 (126)
465 1hxm_B Gamma-delta T-cell rece 98.1 1.2E-05 4.2E-10 53.4 7.9 30 58-87 9-40 (242)
466 3puc_A Titin; I-SET IG-like do 98.1 3.8E-06 1.3E-10 47.8 4.5 74 47-127 5-83 (99)
467 2dm2_A Palladin; beta-sandwich 98.1 4.9E-06 1.7E-10 48.5 5.0 44 47-93 7-50 (110)
468 2edn_A Myosin-binding protein 98.1 2.3E-06 7.8E-11 51.0 3.4 39 101-139 12-53 (118)
469 3shs_A HOC head outer capsid p 98.1 4.1E-05 1.4E-09 52.0 9.7 86 58-144 10-143 (304)
470 3m45_A Cell adhesion molecule 98.1 4.5E-06 1.6E-10 48.2 4.6 41 100-140 5-45 (108)
471 1wwb_X Protein (brain derived 98.1 1.3E-06 4.4E-11 50.6 2.1 31 1-32 66-96 (103)
472 1gl4_B Basement membrane-speci 98.1 2.7E-06 9.2E-11 48.5 3.1 31 1-32 66-96 (98)
473 2ens_A Advanced glycosylation 98.1 9.4E-06 3.2E-10 46.1 5.5 70 47-127 9-78 (96)
474 3bn3_B ICAM-5, intercellular a 98.1 7.7E-05 2.6E-09 48.3 10.1 84 58-142 10-133 (196)
475 1fhg_A Telokin; immunoglobulin 98.1 5.1E-06 1.7E-10 51.5 4.5 78 43-127 36-119 (154)
476 2cpc_A KIAA0657 protein; immun 98.0 6.2E-06 2.1E-10 48.2 4.6 33 111-144 23-55 (113)
477 2eo9_A Roundabout homolog 1; b 98.0 7.3E-06 2.5E-10 48.4 4.6 44 47-93 7-50 (118)
478 1hxm_A Gamma-delta T-cell rece 98.0 2.9E-05 9.9E-10 51.4 7.9 74 1-93 79-161 (229)
479 3irg_B Obscurin-like protein 1 98.0 8.7E-06 3E-10 47.0 4.7 74 47-127 12-90 (107)
480 2e6q_A Obscurin-like protein 1 98.0 1.4E-05 4.6E-10 47.2 5.5 44 47-95 7-50 (112)
481 1mq8_A ICAM-1, intercellular a 98.0 5.2E-05 1.8E-09 52.1 9.2 85 58-143 7-131 (291)
482 1gl4_B Basement membrane-speci 98.0 1E-05 3.5E-10 46.0 4.8 41 101-141 9-51 (98)
483 3u1s_H FAB PGT145 heavy chain; 98.0 7.3E-06 2.5E-10 55.4 4.8 72 1-84 106-204 (267)
484 3fku_X Neutralizing antibody F 98.0 6.9E-05 2.4E-09 50.9 9.6 29 58-86 8-38 (280)
485 1ntl_A CRRY-IG; immunology, co 98.0 3.5E-05 1.2E-09 57.4 8.6 30 113-142 461-492 (551)
486 3rbg_A Cytotoxic and regulator 98.0 5.7E-06 1.9E-10 49.4 3.6 31 1-33 70-100 (124)
487 3mtr_A N-CAM-1, NCAM-1, neural 98.0 2.4E-05 8.3E-10 50.8 6.9 104 1-126 80-193 (215)
488 2xot_A Amphoterin-induced prot 98.0 3.9E-06 1.3E-10 59.2 3.1 32 58-90 254-285 (361)
489 2e7c_A Myosin-binding protein 98.0 8.5E-06 2.9E-10 48.1 4.1 76 46-127 19-100 (118)
490 3irg_A Titin; IG-like, titin, 98.0 7.2E-06 2.5E-10 46.6 3.7 73 48-127 5-84 (100)
491 2yuz_A Myosin-binding protein 98.0 9.8E-06 3.4E-10 46.6 4.2 73 47-128 6-83 (100)
492 2cr3_A Basic fibroblast growth 98.0 5.1E-06 1.7E-10 47.6 3.0 36 108-144 10-45 (99)
493 2dm3_A KIAA0992 protein, palla 98.0 5.8E-06 2E-10 48.1 3.2 44 47-93 8-51 (110)
494 4hwu_A Fibroblast growth facto 98.0 6.3E-06 2.1E-10 46.7 3.2 32 1-33 55-86 (95)
495 3cx2_A Myosin-binding protein 97.9 1.6E-05 5.4E-10 46.2 5.0 38 48-87 4-44 (108)
496 3qr2_A Basigin; CD147, EMMPRIN 97.9 1.9E-05 6.6E-10 47.8 5.5 42 46-90 19-60 (137)
497 3tv3_H PGT128 heavy chain, IG 97.9 7.8E-05 2.7E-09 49.4 8.9 28 113-140 152-181 (239)
498 2eo1_A OBSCN protein, cDNA FLJ 97.9 8.7E-06 3E-10 46.7 3.6 35 109-144 19-53 (102)
499 2bk8_A Connectin, M1, titin he 97.9 3.6E-05 1.2E-09 43.6 6.1 65 58-127 9-79 (97)
500 2e7b_A Obscurin; IG-like domai 97.9 1.7E-05 5.8E-10 45.5 4.6 43 47-93 7-49 (103)
No 1
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.87 E-value=2.1e-21 Score=144.54 Aligned_cols=128 Identities=24% Similarity=0.436 Sum_probs=103.0
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.|.|..| ..+..+.|.|. .+|.+...+ ....+.+|+.+.|.|.+.|.|.|
T Consensus 351 i~~v~~~D~G~Y~C~a~N~~g-~~~~~~~l~V~-------------~~P~~~~~~--~~~~~~~G~~v~l~C~~~g~P~p 414 (570)
T 3b43_A 351 MYNLSVEDSGDYTCEAHNAAG-SASSSTSLKVK-------------EPPVFRKKP--HPVETLKGADVHLECELQGTPPF 414 (570)
T ss_dssp EESCCGGGCEEEEEEEEBTTB-CCEEEEEECEE-------------CCCEECSCC--CCEEECTTCCEEEEEEEESSSSC
T ss_pred ECCCCcccCEEEEEEEEeCCC-EEEEEEEEEec-------------CCCeeecCC--CceeecCCCEEEEEEEEecCCCC
Confidence 467899999999999999998 45555565553 678887666 56778899999999999999999
Q ss_pred eEEEEeCCeeeEecccC-------------------------------------------CCCCCeeeeCCceeEeecCC
Q psy16421 81 SIMWRREGGEMITNSFN-------------------------------------------NTVPPIVKIPSQLIGAHEGQ 117 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~-------------------------------------------~~~~p~~~~~~~~~~~~~g~ 117 (151)
.+.|++ ++..+..... +..+|.|...+....+.+|+
T Consensus 415 ~v~W~k-~g~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~~~P~~~~~~~~~~~~~g~ 493 (570)
T 3b43_A 415 QVSWHK-DKRELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLKAPPRFVKKLSDISTVVGE 493 (570)
T ss_dssp CCEEEE-TTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECCCCEEEECCCCBCCBTTC
T ss_pred EEEEEE-CCEECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEeccCCcccccCCCceecCCC
Confidence 999999 4554332110 34678888887788889999
Q ss_pred cEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 118 QLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 118 ~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
.+.|.|.+.|.|+|.+.|+|+++.+...
T Consensus 494 ~~~l~c~~~g~p~~~v~W~k~~~~~~~~ 521 (570)
T 3b43_A 494 EVQLQATIEGAEPISVAWFKDKGEIVRE 521 (570)
T ss_dssp CEEEEEEEESCSSCCCEEEETTEECCCC
T ss_pred eEEEEEEEecCCCCEEEEEeCCeEeccC
Confidence 9999999999999999999998666543
No 2
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.86 E-value=9.7e-21 Score=129.27 Aligned_cols=129 Identities=23% Similarity=0.436 Sum_probs=99.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..| ..+..+.|.|. .+|.+...+. ....+.+|+.+.|.|.+.|.|.+
T Consensus 65 i~~v~~~d~G~Y~C~~~n~~g-~~~~~~~l~V~-------------~~p~~~~~~~-~~~~v~~g~~~~l~C~~~g~p~~ 129 (284)
T 2rik_A 65 VLKVTKGDAGQYTCYASNVAG-KDSCSAQLGVQ-------------EPPRFIKKLE-PSRIVKQDEHTRYECKIGGSPEI 129 (284)
T ss_dssp ESSCCGGGCEEEEEEEEETTE-EEEEEEEEEEE-------------CCCEEEECCC-SEEEEETTCCEEEEEEEESSSCC
T ss_pred EecCCcccCEEEEEEEEECCc-eEEEEEEEEcc-------------CCCcccccCC-CceEecCCceEEEEEEEeeeCCC
Confidence 567899999999999999877 44555565553 5677665542 34567899999999999999999
Q ss_pred eEEEEeCCeeeEecccC-------------------------------------------CCCCCeeeeCCceeEeecCC
Q psy16421 81 SIMWRREGGEMITNSFN-------------------------------------------NTVPPIVKIPSQLIGAHEGQ 117 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~-------------------------------------------~~~~p~~~~~~~~~~~~~g~ 117 (151)
.+.|++ ++..+..... +..+|.+...+....+.+|+
T Consensus 130 ~v~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~ 208 (284)
T 2rik_A 130 KVLWYK-DETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGA 208 (284)
T ss_dssp EEEEEE-TTEECCCSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTC
T ss_pred EEEEEE-CCEECcCCCcEEEEEcCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCC
Confidence 999999 4544332211 23466666666777889999
Q ss_pred cEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 118 QLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 118 ~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
++.|.|.+.|.|.|.+.|+|+|..+..+
T Consensus 209 ~v~l~C~~~g~p~~~v~W~~~~~~~~~~ 236 (284)
T 2rik_A 209 DVHLECELQGTPPFQVSWHKDKRELRSG 236 (284)
T ss_dssp CEEEEEECBSSSCCEEEEEETTEEECBT
T ss_pred eEEEEEEEEecCCCEEEEEECCEECcCC
Confidence 9999999999999999999998766543
No 3
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.85 E-value=9.9e-21 Score=140.93 Aligned_cols=128 Identities=22% Similarity=0.429 Sum_probs=99.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.|.|..| ..+..+.| .+..+|.+..... ....+.+|+.+.|.|.+.|.|.+
T Consensus 257 i~~v~~~D~G~Y~C~a~N~~g-~~~~~~~l-------------~V~~~p~~~~~~~-~~~~v~~g~~~~l~C~~~g~P~p 321 (570)
T 3b43_A 257 VLKVTKGDAGQYTCYASNVAG-KDSCSAQL-------------GVQEPPRFIKKLE-PSRIVKQDEHTRYECKIGGSPEI 321 (570)
T ss_dssp ESSBCGGGCEEEEEEEEETTE-EEEEEEEE-------------CCBCCCEEEECCC-SBCCEESSCEEEEEEEEESSSSC
T ss_pred EcccCcccCEEEEEEEECCCC-cEEEEEEE-------------EeecCCcccccCC-CccEEcCCCcEEEEEEEeeCCCC
Confidence 567899999999999999887 44444444 4457788776543 23457789999999999999999
Q ss_pred eEEEEeCCeeeEecccC-------------------------------------------CCCCCeeeeCCceeEeecCC
Q psy16421 81 SIMWRREGGEMITNSFN-------------------------------------------NTVPPIVKIPSQLIGAHEGQ 117 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~-------------------------------------------~~~~p~~~~~~~~~~~~~g~ 117 (151)
.+.|++ ++..+..... +..+|.|...+....+.+|+
T Consensus 322 ~v~W~k-~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~G~ 400 (570)
T 3b43_A 322 KVLWYK-DETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGA 400 (570)
T ss_dssp EEEEEE-TTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCEEECTTC
T ss_pred EEEEeE-CCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCceeecCCC
Confidence 999999 4544332110 34577777777777889999
Q ss_pred cEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 118 QLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 118 ~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
++.|.|.+.|.|.|.+.|+|+|..+..
T Consensus 401 ~v~l~C~~~g~P~p~v~W~k~g~~l~~ 427 (570)
T 3b43_A 401 DVHLECELQGTPPFQVSWHKDKRELRS 427 (570)
T ss_dssp CEEEEEEEESSSSCCCEEEETTEECCS
T ss_pred EEEEEEEEecCCCCEEEEEECCEECcC
Confidence 999999999999999999999876543
No 4
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.85 E-value=2.9e-20 Score=128.24 Aligned_cols=135 Identities=23% Similarity=0.335 Sum_probs=99.6
Q ss_pred Cccccc-cCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSR-EHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~-~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++. +|+|.|+|.+.|..| ..+..+.|.|...... ....|.+...+ ....+.+|+.+.|.|.+.|.|.
T Consensus 67 i~~~~~~~D~G~Y~C~a~n~~g-~~~~~~~l~V~~~~~~------p~~~p~i~~~~--~~~~v~~g~~v~l~C~~~g~p~ 137 (304)
T 2yd9_A 67 IQPLRTPRDENVYECVAQNSVG-EITVHAKLTVLREDQL------PSGFPNIDMGP--QLKVVERTRTATMLCAASGNPD 137 (304)
T ss_dssp ECSCCTTTTCSEEEEEEECSSC-EECCEEEEEEECGGGC------CTTCCEEEECC--CCEEEETTSCEEECCEEECSSC
T ss_pred EecccccCCCeEEEEEEECCCC-eEEEEEEEEEeccccC------CCCCCeeecCC--ccEEEeCCCeEEEEEECccCCC
Confidence 456777 999999999999988 4666777777521100 01226666655 5678889999999999999999
Q ss_pred CeEEEEeCCeeeEeccc----------C-------------------------------------CCCCCeeeeCCceeE
Q psy16421 80 PSIMWRREGGEMITNSF----------N-------------------------------------NTVPPIVKIPSQLIG 112 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~----------~-------------------------------------~~~~p~~~~~~~~~~ 112 (151)
+.+.|++ ++..+.... . ...+|.+...+....
T Consensus 138 ~~v~W~k-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~ 216 (304)
T 2yd9_A 138 PEITWFK-DFLPVDPSASNGRIKQLRSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHE 216 (304)
T ss_dssp CEEEEEE-TTEECCGGGGTTSEEECTTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBC
T ss_pred CeEEEEE-CCEECcCCCCcceEEeCCCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceE
Confidence 9999999 555543211 0 023455666666667
Q ss_pred eecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 113 AHEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 113 ~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
+.+|+.+.|.|.+.|.|.|.+.|+|+|..+..+
T Consensus 217 v~~G~~v~l~C~~~g~p~p~v~W~~~~~~l~~~ 249 (304)
T 2yd9_A 217 IMPGGNVNITCVAVGSPMPYVKWMQGAEDLTPE 249 (304)
T ss_dssp CCTTCCEEEEEEEEEESCCEEEEEETTEECSCS
T ss_pred EcCCCeEEEEEEEeeeCCCEEEEEECCEECCCc
Confidence 889999999999999999999999997766443
No 5
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.85 E-value=2.6e-20 Score=127.45 Aligned_cols=129 Identities=20% Similarity=0.421 Sum_probs=95.4
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..+...+..+.|.|. .+|.+...+ ....+.+|+.+.|.|.+.+.|.+
T Consensus 66 i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~-------------~~~~~~~~~--~~~~~~~g~~v~l~C~~~~~p~~ 130 (291)
T 1qz1_A 66 IYNANIDDAGIYKCVVTAEDGTQSEATVNVKIF-------------QKLMFKNAP--TPQEFKEGEDAVIVCDVVSSLPP 130 (291)
T ss_dssp ECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEE-------------CCSEEEECC--SSEEEETTSCEEECCEEECSSCC
T ss_pred EecCCCCCCEEEEEEEEcCCCCeeEEEEEEEee-------------ccccccCCC--CcccccCCCeEEEEEEeccCCCC
Confidence 567899999999999999886444445555543 667777666 56788899999999999999999
Q ss_pred eEEEEeCCeeeEeccc---------C-----------------------------------CCCCCeeeeCC--ceeEee
Q psy16421 81 SIMWRREGGEMITNSF---------N-----------------------------------NTVPPIVKIPS--QLIGAH 114 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~---------~-----------------------------------~~~~p~~~~~~--~~~~~~ 114 (151)
.+.|+++ +..+.... . +..+|.+.... ....+.
T Consensus 131 ~v~W~~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~ 209 (291)
T 1qz1_A 131 TIIWKHK-GRDVILKKDVRFIVLSNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATAN 209 (291)
T ss_dssp EEEEEET-TSCSSTTCCTTEEECTTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETT
T ss_pred EEEEEEC-CEEcccCCCceEEEccCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccc
Confidence 9999994 44432110 0 11234444332 244677
Q ss_pred cCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 115 EGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 115 ~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
+|+.+.|.|.+.|.|.|.+.|+|+|..+...
T Consensus 210 ~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~ 240 (291)
T 1qz1_A 210 LGQSVTLVCDADGFPEPTMSWTKDGEPIENE 240 (291)
T ss_dssp SCCCEEEEEEEEEESCCEEEEEETTEECCCC
T ss_pred cCceEEEEEEEEEeCCCcEEEEECCEECcCC
Confidence 8999999999999999999999998766543
No 6
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.83 E-value=5.3e-20 Score=125.90 Aligned_cols=128 Identities=20% Similarity=0.413 Sum_probs=91.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..|...+..+.|.|. .+|.+...+ ....+.+|+.+.|.|.+.+.|.+
T Consensus 64 i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~v~-------------~~~~~~~~~--~~~~v~~G~~v~l~C~~~~~p~~ 128 (291)
T 2wim_A 64 IYNANIEDAGIYRCQATDAKGQTQEATVVLEIY-------------QKLTFREVV--SPQEFKQGEDAEVVCRVSSSPAP 128 (291)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEEEEEEEE-------------CCCBCCSCC--CSEEEETTSCEEECCCCBCSSCC
T ss_pred EccCCcccCEEEEEEEecccCceEEEEEEEEec-------------CCcceEeCC--CChhhcCCCCEEEEEEEccCCCC
Confidence 567899999999999999887543445555543 456555444 56778899999999999999999
Q ss_pred eEEEEeCCeeeEecccC--------------------------------------------CCCCCeeeeCCc--eeEee
Q psy16421 81 SIMWRREGGEMITNSFN--------------------------------------------NTVPPIVKIPSQ--LIGAH 114 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~--------------------------------------------~~~~p~~~~~~~--~~~~~ 114 (151)
.+.|++ ++..+..... +..+|.+..... ...+.
T Consensus 129 ~v~W~~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~ 207 (291)
T 2wim_A 129 AVSWLY-HNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAE 207 (291)
T ss_dssp EEEEEC-C----CBCCCSSEEECTTSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSS
T ss_pred EEEEEE-CCccccccCCceEEEccCCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceec
Confidence 999999 4444332100 122344433332 34567
Q ss_pred cCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 115 EGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 115 ~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+|+.+.|.|.+.|.|.|.+.|+|+|..+..
T Consensus 208 ~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~ 237 (291)
T 2wim_A 208 RGEEMTFSCRASGSPEPAISWFRNGKLIEE 237 (291)
T ss_dssp SCCEEEEECBCCCBSCCEEEEEETTEECCC
T ss_pred CCCeEEEEEEeecCCCCeEEEEECCEECcC
Confidence 899999999999999999999999776643
No 7
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.82 E-value=1.8e-19 Score=128.36 Aligned_cols=135 Identities=24% Similarity=0.407 Sum_probs=99.6
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..+...+..+.+.|..... ...++.+...+ ....+.+|+.+.|.|.+.+.|.+
T Consensus 181 i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~-------~~~~~~~~~~~--~~~~~~~g~~~~l~C~~~~~p~~ 251 (403)
T 3laf_A 181 ISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPG-------LHRQLYFLQRP--SNVIAIEGKDAVLECCVSGYPPP 251 (403)
T ss_dssp ECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCC-------CCEEEEEEECC--CCEEEETTSCEEECCEEEEESCC
T ss_pred EcccccccCEEEEEEEEcCCCceeccceeEEEecCCC-------cccCceEecCC--CceEecCCCcEEEEEEcCCCCCC
Confidence 4678999999999999998875555667776642110 00112233333 56778899999999999999999
Q ss_pred eEEEEeCCeeeEecccC-----------------------------------------CCCCCeeeeCCceeEeecCCcE
Q psy16421 81 SIMWRREGGEMITNSFN-----------------------------------------NTVPPIVKIPSQLIGAHEGQQL 119 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~-----------------------------------------~~~~p~~~~~~~~~~~~~g~~~ 119 (151)
.+.|++ ++..+..... +..+|.+...+....+.+|+.+
T Consensus 252 ~~~W~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v 330 (403)
T 3laf_A 252 SFTWLR-GEEVIQLRSKKYSLLGGSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLVPPWFLNHPSNLYAYESMDI 330 (403)
T ss_dssp EEEEEE-TTEECCCSSSSEEEETTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEECCTTCCE
T ss_pred eEEEEE-CCeeccCCCceEEECCccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEECCCcEeecCcceEEecCCeE
Confidence 999999 4554432110 2346677777777788999999
Q ss_pred EEEeeecccCCCeeEEEcCCceeccC
Q psy16421 120 VLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 120 ~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
.|.|.+.|.|.|.+.|+|+|..+..+
T Consensus 331 ~l~C~~~g~p~p~v~W~~~g~~~~~~ 356 (403)
T 3laf_A 331 EFECAVSGKPVPTVNWMKNGDVVIPS 356 (403)
T ss_dssp EECCEEEEESCCEEEEEETTEECCCS
T ss_pred EEEEEEeeccCCEEEEEECCEECCCC
Confidence 99999999999999999998776543
No 8
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.81 E-value=9.9e-20 Score=129.60 Aligned_cols=137 Identities=22% Similarity=0.405 Sum_probs=94.5
Q ss_pred CccccccCCeEEEEEEEcCCCCCC--ccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSV--SKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSP 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~ 78 (151)
|.+++.+|+|.|+|.|.|..+... .....+.+... ......+|.+.... +....+.+|+.+.|.|.+.|.|
T Consensus 161 I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~------~~~~~~~p~~~~~~-~~~~~~~~G~~v~l~C~~~g~P 233 (384)
T 3kld_A 161 IAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRND------GVMGEYEPKIEVQF-PETVPAEKGTTVKLECFALGNP 233 (384)
T ss_dssp ESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEE------EECCCEEEEEEEEC-CSEEEEETTSCEEEEEEEEEES
T ss_pred EeecCHHHCceEEEEEecccccceeeCCceEEEEccC------CcccccCCceeecC-CCceEecCCCcEEEEEEEeecC
Confidence 568899999999999999876321 11222222100 01111233333222 1456788999999999999999
Q ss_pred CCeEEEEeCCeeeEecccC---------------------------------------CCCCCeeeeCCceeEeecCCcE
Q psy16421 79 PPSIMWRREGGEMITNSFN---------------------------------------NTVPPIVKIPSQLIGAHEGQQL 119 (151)
Q Consensus 79 ~~~~~W~~~~~~~~~~~~~---------------------------------------~~~~p~~~~~~~~~~~~~g~~~ 119 (151)
.|.+.|++.++..+..... +..+|.+...+....+..|+++
T Consensus 234 ~p~i~W~k~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v 313 (384)
T 3kld_A 234 VPTILWRRADGKPIARKARRHKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESV 313 (384)
T ss_dssp CCEEEEEETTCCCCCTTCEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCE
T ss_pred CCcEEEEeCCCccccccceecCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCE
Confidence 9999999965544322110 2345666666677788999999
Q ss_pred EEEeeecccCCCeeEEEcCCceecc
Q psy16421 120 VLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 120 ~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
.|.|.+.|.|.|.++|+|||..+..
T Consensus 314 ~l~C~~~g~P~p~i~W~k~g~~l~~ 338 (384)
T 3kld_A 314 FWECKANGRPKPTYRWLKNGDPLLT 338 (384)
T ss_dssp EEECEEEEESCCEEEEEETTEECCC
T ss_pred EEEeECCccCCCeEEEEECCEECCC
Confidence 9999999999999999999877643
No 9
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.78 E-value=3.2e-18 Score=116.91 Aligned_cols=127 Identities=17% Similarity=0.245 Sum_probs=91.7
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCe-eEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPD-ILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++.+|+|.|+|.+.|..+ ..+..+.|.|. .+|. +...+ ....+.+|+++.|.|.+.+.+.
T Consensus 55 i~~~~~~d~G~Y~C~~~~~~~-~~~~~~~l~V~-------------~~~~~~~~~~--~~~~v~~g~~v~L~C~~~~~~~ 118 (289)
T 3ejj_X 55 TRNATFKNTGTYRCTELEDPM-AGSTTIHLYVK-------------DPAHSWNLLA--QEVTVVEGQEAVLPCLITDPAL 118 (289)
T ss_dssp ESSCCGGGCEEEEEECCC------CEEEEEEEC-------------CSSCSEEESC--SEEEEETTSCEEECEEESCGGG
T ss_pred EeeeccccCEEEEEEEeccCC-cceeEEEEEEe-------------CCCcceeccc--ceEEEecCCceEeEEEccCCCc
Confidence 568999999999999998877 45566666653 3333 44444 5678889999999999988666
Q ss_pred Ce-EEEEeCCeeeEecccC-----------------------------------------C----CCCCeeeeCCceeEe
Q psy16421 80 PS-IMWRREGGEMITNSFN-----------------------------------------N----TVPPIVKIPSQLIGA 113 (151)
Q Consensus 80 ~~-~~W~~~~~~~~~~~~~-----------------------------------------~----~~~p~~~~~~~~~~~ 113 (151)
+. +.|++.++..+..... + ..+|.+...+....+
T Consensus 119 ~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~ 198 (289)
T 3ejj_X 119 KDSVSLMREGGRQVLRKTVYFFSPWRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVR 198 (289)
T ss_dssp GGSEEEEEGGGEECCTTCCEEEETTTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEEC
T ss_pred ceEEEEEecCCeecCCCccEEECCCCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEE
Confidence 55 9998756655432111 1 156777777777777
Q ss_pred ecCCcEEEEeeecc-cCCCeeEEEcCCceec
Q psy16421 114 HEGQQLVLECISEA-YPKSVNYWTREKGDMI 143 (151)
Q Consensus 114 ~~g~~~~l~C~~~g-~p~~~~~W~k~~~~~~ 143 (151)
.+|+++.|.|.+.+ .|.+.+.|++++..+.
T Consensus 199 ~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~ 229 (289)
T 3ejj_X 199 IRGEAAQIVCSATNAEVGFNVILKRGDTKLE 229 (289)
T ss_dssp CSSSCEEEEEEEEESSSCCEEEEEETTEECC
T ss_pred EeCCcEEEEEEeCCCCCceEEEEEECCEEee
Confidence 89999999999998 7899999999976553
No 10
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.78 E-value=2.7e-18 Score=132.18 Aligned_cols=127 Identities=23% Similarity=0.421 Sum_probs=98.4
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..| ..+..+.|.|. .++.+...+ ....+.+|+++.|.|.+.|.|.+
T Consensus 310 i~~v~~~D~G~Y~C~a~n~~g-~~~~~~~l~V~-------------~~~~~~~~~--~~~~v~~G~~v~l~C~~~g~p~~ 373 (816)
T 3dmk_A 310 IKDAVVEDSGKYLCVVNNSVG-GESVETVLTVT-------------APLSAKIDP--PTQTVDFGRPAVFTCQYTGNPIK 373 (816)
T ss_dssp ECSCCGGGCEEEEEEEECSSC-EEEEEEEEEEC-------------EEEEEEEES--SEEECCTTSCEEEEEEEEEECCC
T ss_pred ECCCCHhHCEEEEEEEEcCCC-ceEEEEEEEEc-------------CCCceeeCC--CceEecCCCCEEEEEEEeccCCC
Confidence 567899999999999999988 44555555553 344444444 46678899999999999999999
Q ss_pred eEEEEeCCeeeEecccC---------------------------------C---CCCCeeeeCCceeEeecCCcEEEEee
Q psy16421 81 SIMWRREGGEMITNSFN---------------------------------N---TVPPIVKIPSQLIGAHEGQQLVLECI 124 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~---------------------------------~---~~~p~~~~~~~~~~~~~g~~~~l~C~ 124 (151)
.+.|++ +++.+..... + ..+|.+...+....+.+|+.+.|.|.
T Consensus 374 ~v~W~k-~g~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~ 452 (816)
T 3dmk_A 374 TVSWMK-DGKAIGHSESVLRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCV 452 (816)
T ss_dssp EEEEEE-TTEECSCCSSEEEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCSSCCCEEEEECCCEEECSSSCEEEEEE
T ss_pred EEEEEE-CCEECCCCCCEEEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEccccCCCceEecCcceEEcCCCCEEEEEE
Confidence 999999 5665443221 1 35677777677778899999999999
Q ss_pred ecccCCCeeEEEcCCceecc
Q psy16421 125 SEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 125 ~~g~p~~~~~W~k~~~~~~~ 144 (151)
+.|.|.|.+.|+|+|..+..
T Consensus 453 ~~g~p~p~v~W~~~g~~l~~ 472 (816)
T 3dmk_A 453 AGGNPTPEISWELDGKKIAN 472 (816)
T ss_dssp EECSSCCEEEEEETTEECCS
T ss_pred EecCCCCEEEEEECCEECCC
Confidence 99999999999999776643
No 11
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.76 E-value=4.5e-18 Score=118.43 Aligned_cols=126 Identities=17% Similarity=0.367 Sum_probs=84.1
Q ss_pred CccccccCCeEEEEEEEcCCCCC----CccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPS----VSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~----~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g 76 (151)
|.+++.+|+|.|+|.+.|..+.. .+..+.|.|.. ...+|.+. .+ ...+.+|+.+.|.|.+.|
T Consensus 78 I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~----------~p~~p~i~-~~---~~~~~~g~~~~l~C~~~g 143 (327)
T 2wng_A 78 ISNITPADAGTYYCVKFRKGSPDTEFKSGAGTELSVRA----------KPSAPVVS-GP---AARATPQHTVSFTCESHG 143 (327)
T ss_dssp ECSCCGGGCEEEEEEEEESSTTCEEEEECCCEEEEEEB----------CCCCCEEE-CC---SSCBCTTCEEEEEEEEEE
T ss_pred EccCccccCeEEEEEeecCCCcceeEeecCcEEEEEEe----------cCCCceee-cc---ccccCCCCEEEEEEEEeC
Confidence 57899999999999999986531 12345566531 12334443 22 346778999999999988
Q ss_pred CCCC--eEEEEeCCeeeEeccc----------------------------C-------------------------CCCC
Q psy16421 77 SPPP--SIMWRREGGEMITNSF----------------------------N-------------------------NTVP 101 (151)
Q Consensus 77 ~~~~--~~~W~~~~~~~~~~~~----------------------------~-------------------------~~~~ 101 (151)
.|++ .+.|++ +++.+.... . +..+
T Consensus 144 ~p~~~~~v~W~k-~g~~l~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~ 222 (327)
T 2wng_A 144 FSPRDITLKWFK-NGNELSDFQTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVP 222 (327)
T ss_dssp EBSSCCEEEEEE-TTEECCCEEEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBC
T ss_pred ccCCCcEEEEEE-CCEEccccccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCC
Confidence 7765 899999 555443110 0 1123
Q ss_pred CeeeeCCceeEeecCCcEEEEeeecccCC-C-eeEEEcCCceec
Q psy16421 102 PIVKIPSQLIGAHEGQQLVLECISEAYPK-S-VNYWTREKGDMI 143 (151)
Q Consensus 102 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~-~-~~~W~k~~~~~~ 143 (151)
|.+...+.. +.+|+.+.|.|.+.|.|+ + .+.|+|||..+.
T Consensus 223 P~i~~~~~~--~~~G~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 264 (327)
T 2wng_A 223 PTLEVTQQP--VRAENQVNVTCQVRKFYPQRLQLTWLENGNVSR 264 (327)
T ss_dssp CEEEEEEEC--CSSTTCCEEEEEEEEEBSSCEEEEEEETTEEEE
T ss_pred CEEEEecCC--cCCCCcEEEEEEEccccCCCcEEEEEECCeEcc
Confidence 444333222 568999999999999544 4 699999987664
No 12
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.76 E-value=3.9e-18 Score=117.96 Aligned_cols=131 Identities=14% Similarity=0.261 Sum_probs=90.7
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCC-CCceEeecCCeEEEEeee-----
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPT-SSDIMVREGSNVSMRCAA----- 74 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~g~~~~l~C~~----- 74 (151)
|.+++.+|+|.|+|.+.|..+. ....+.+.+. ..+|.+...+. .....+.+|+.+.|.|.+
T Consensus 66 i~~v~~~D~G~Y~C~a~n~~g~-~~~~~~v~v~------------~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~ 132 (315)
T 1itb_B 66 FVPAKVEDSGHYYCVVRNSSYC-LRIKISAKFV------------ENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFK 132 (315)
T ss_dssp CTTCCGGGCSCCEECCCSSSCC-CCEECCCEEE------------CCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTC
T ss_pred ECCCChhhCEEEEEEEeCCceE-EEEEEEEEEe------------CCCCCcccccccccceEEecCCCeEEEEecccccc
Confidence 6789999999999999998763 3333333321 23343322210 012467789999999998
Q ss_pred -cCCCCCeEEEEeCCeeeEecccC-------------------------------------------------CCCCCee
Q psy16421 75 -SGSPPPSIMWRREGGEMITNSFN-------------------------------------------------NTVPPIV 104 (151)
Q Consensus 75 -~g~~~~~~~W~~~~~~~~~~~~~-------------------------------------------------~~~~p~~ 104 (151)
.|.|.+.+.|++ +++.+..... ...+|.+
T Consensus 133 ~~g~p~~~i~W~k-~~~~l~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~ 211 (315)
T 1itb_B 133 NENNELPKLQWYK-DCKPLLLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVI 211 (315)
T ss_dssp TTTTCCCCCEEEE-TTEECCCCSSSEEEETTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEE
T ss_pred cCCCCCCEEEEEE-CCEECCCccceEeecCceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEE
Confidence 889999999999 5555532110 0245555
Q ss_pred eeCCce-eEeecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 105 KIPSQL-IGAHEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 105 ~~~~~~-~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
...+.. ..+.+|+.+.|.|.+.|.|.|.+.|++||..+..+
T Consensus 212 ~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~i~~~ 253 (315)
T 1itb_B 212 VSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDED 253 (315)
T ss_dssp CSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEETTEECCTT
T ss_pred ecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEECCEECCcc
Confidence 554443 57889999999999999999999999997766543
No 13
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.76 E-value=4e-18 Score=120.79 Aligned_cols=135 Identities=22% Similarity=0.357 Sum_probs=94.9
Q ss_pred CccccccCCeEEEEEEEcCCCCC----CccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPS----VSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~----~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g 76 (151)
|.+++.+|+|.|+|.+.|..+.. .+..+.|.+... .....+|.+.... +....+.+|+.+.|.|.+.+
T Consensus 162 i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~-------~~~~~~P~~~~~~-~~~~~~~~G~~v~l~C~~~g 233 (382)
T 1cs6_A 162 IAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAE-------DARQYAPSIKAKF-PADTYALTGQMVTLECFAFG 233 (382)
T ss_dssp ESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESC-------CCCCEEEEEEECC-CSEEEEETTCCEEEECEEEE
T ss_pred EEeeCcccCeeEEEEEEEccccccceeEccceeeccchh-------hcccCCCceeccC-CCceEEeCCCeEEEEEEEcc
Confidence 46789999999999999987521 122344444311 0111245554432 14677889999999999999
Q ss_pred CCCCeEEEEeCCeeeEecc----cC---------------------------------CCCCCeeeeCCceeEeecCCcE
Q psy16421 77 SPPPSIMWRREGGEMITNS----FN---------------------------------NTVPPIVKIPSQLIGAHEGQQL 119 (151)
Q Consensus 77 ~~~~~~~W~~~~~~~~~~~----~~---------------------------------~~~~p~~~~~~~~~~~~~g~~~ 119 (151)
.|.+.+.|+++++. +... .. +..+|.+...+....+.+|+.+
T Consensus 234 ~p~~~i~W~~~~~~-~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~ 312 (382)
T 1cs6_A 234 NPVPQIKWRKLDGS-QTSKWLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDL 312 (382)
T ss_dssp ESCCEEEEEECCSC-CSCCCSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCE
T ss_pred CCCCEEEEEECCcc-cccEEecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeE
Confidence 99999999995443 2210 00 2345666666677788999999
Q ss_pred EEEeeecccCCCeeEEEcCCceecc
Q psy16421 120 VLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 120 ~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
.|.|.+.|.|.|.+.|+|+|..+..
T Consensus 313 ~l~C~~~g~p~p~v~W~~~g~~~~~ 337 (382)
T 1cs6_A 313 RWSCVASGKPRPAVRWLRDGQPLAS 337 (382)
T ss_dssp EEECEEEEESCCEEEEEETTEECCC
T ss_pred EEEEEeeeecCCEEEEEECCEECCC
Confidence 9999999999999999999876654
No 14
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.75 E-value=6.2e-18 Score=122.07 Aligned_cols=123 Identities=11% Similarity=0.159 Sum_probs=79.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++++|+|.|+|.|.|..| .....+.|.|. .+|.+... ....+..|+.+.|.|.+.|.|.|
T Consensus 107 I~~v~~~D~G~Y~C~a~N~~g-~~~~~~~l~V~-------------~~p~~~~~---~p~~~~~~~~~~L~C~a~G~P~P 169 (423)
T 3qs7_E 107 ILKMTETQAGEYLLFIQSEAT-NYTILFTVSIR-------------NTLLYTLR---RPYFRKMENQDALVCISESVPEP 169 (423)
T ss_dssp ESSCCSSSCSEEEEEEEC--C-EEEEEEEEEEC------------------CEE---EEEEEECSSSSCEEEEEEESSCC
T ss_pred EeecCcccCEEEEEEEEcCCC-cEEEEEEEEEe-------------cCcccccc---CCcEeccCCceEEEEEEeeecCC
Confidence 568999999999999999987 44455565553 33333211 12234457888999999999999
Q ss_pred eEEEEeCCeeeEecc------------------c-C---------------------CCCCCeeeeCCceeEeecCCcEE
Q psy16421 81 SIMWRREGGEMITNS------------------F-N---------------------NTVPPIVKIPSQLIGAHEGQQLV 120 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~------------------~-~---------------------~~~~p~~~~~~~~~~~~~g~~~~ 120 (151)
.+.|++++ ..+... . + +..+|.+ .+....+.+|+++.
T Consensus 170 ~i~W~k~~-~~~~~~~~~~~~~~~~~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~~~~~~v~~G~~v~ 246 (423)
T 3qs7_E 170 IVEWVLCD-SQGESCKEESPAVVKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQT--TLPQLFLKVGEPLW 246 (423)
T ss_dssp EEEEEEC--------------CEEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCS--STTEEEEETTSCEE
T ss_pred eEEEEECC-CCCccccccccccccccceEEecccCeEEEEEEEcCCCCcceeeEEEEEecCCcc--CCCceEEeCCCeEE
Confidence 99999943 322100 0 0 1111111 33456788999999
Q ss_pred EEeeecc-cCCCeeEEEcCCceec
Q psy16421 121 LECISEA-YPKSVNYWTREKGDMI 143 (151)
Q Consensus 121 l~C~~~g-~p~~~~~W~k~~~~~~ 143 (151)
|.|.+.| .|.|.+.|+|+|..+.
T Consensus 247 L~C~~~g~~p~p~i~W~k~g~~l~ 270 (423)
T 3qs7_E 247 IRCKAVHVNHGFGLTWELENKALE 270 (423)
T ss_dssp EEEEEEESSSCCCEEEEESSSBCC
T ss_pred EEEEEEcCCCCcEEEEEECCEEcc
Confidence 9999999 6779999999987553
No 15
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.75 E-value=1e-17 Score=114.67 Aligned_cols=121 Identities=18% Similarity=0.362 Sum_probs=90.1
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC-
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP- 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~- 79 (151)
|.+++.+|+|.|+|.+.| | . +..+.|.|. .+|.....+ ..+.+.+|+.+.|.|.+.+ |.
T Consensus 61 i~~~~~~d~G~Y~C~~~n--g-~-~~~~~l~V~-------------~~~~~~~~~--~~~~~~~g~~v~l~C~~~~-p~~ 120 (290)
T 2o26_X 61 QEKAEATRTGTYTCSNSN--G-L-TSSIYVFVR-------------DPAKLFLVG--LPLFGKEDSDALVRCPLTD-PQV 120 (290)
T ss_dssp ETTCCGGGCEEEEEEESS--S-C-EEEEEEEEE-------------CSSCCBCCC--CCEEEETTSCEEECCCBSC-CSC
T ss_pred EeccCHHhCeEEEEEeeC--C-c-cEEEEEEEe-------------CCCcccccc--cceEEecCCeEEEeCcCCC-CCC
Confidence 568899999999999999 4 2 555666654 344443333 5678889999999999986 77
Q ss_pred CeEEEEeCCeeeEecccC----------------------------------------------CCCCCeeeeCCceeEe
Q psy16421 80 PSIMWRREGGEMITNSFN----------------------------------------------NTVPPIVKIPSQLIGA 113 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~----------------------------------------------~~~~p~~~~~~~~~~~ 113 (151)
+.+.|++.+++.+..... ...+|.+...+....+
T Consensus 121 ~~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v 200 (290)
T 2o26_X 121 SQYSLIECDGKSLPTDLTFVPNPKAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLL 200 (290)
T ss_dssp EEEEEEETTSCCCCTTCEEEEETTTEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCC
T ss_pred ceEEEEeCCCcCCCCCCceeeCCCCCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceE
Confidence 899996546655422110 1156667666666688
Q ss_pred ecCCcEEEEeeecccCCCe-eEEEcCCce
Q psy16421 114 HEGQQLVLECISEAYPKSV-NYWTREKGD 141 (151)
Q Consensus 114 ~~g~~~~l~C~~~g~p~~~-~~W~k~~~~ 141 (151)
.+|+++.|.|.+.|.|.|. +.|+|+|..
T Consensus 201 ~~G~~v~l~C~~~g~p~p~~i~W~~~~~~ 229 (290)
T 2o26_X 201 KKGDTFTVVCTIKDVSTSVNSMWLKMNPQ 229 (290)
T ss_dssp CTTCCEEEEEEEEESSTTCEEEEEEESSS
T ss_pred ecCCcEEEEEEEecCCcceeEEEecCCCC
Confidence 9999999999999999997 999999776
No 16
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.75 E-value=7.9e-18 Score=119.79 Aligned_cols=138 Identities=20% Similarity=0.299 Sum_probs=95.6
Q ss_pred CccccccC-CeEEEEEEEcCCCCCC--ccceEEEEeccccceeEEeecCCCCeeEeCCC-CCceEeecCCeEEEEeeecC
Q psy16421 1 MTEVSREH-MGAYLCIASNGVPPSV--SKRIMLIVQCQYFSKLYIYTSSMPPDILDYPT-SSDIMVREGSNVSMRCAASG 76 (151)
Q Consensus 1 i~~v~~~d-~G~Y~C~~~~~~~~~~--~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~g~~~~l~C~~~g 76 (151)
|.+++.+| .|.|+|.+.|..+... ...+.+.+.... .....+|.+..... .....+.+|+.+.|.|.+.|
T Consensus 175 i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~------~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g 248 (404)
T 3p3y_A 175 FSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTR------GVAERTPSFMYPQGTASSQMVLRGMDLLLECIASG 248 (404)
T ss_dssp ESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCS------CCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCC
T ss_pred EEeeeeccCCcceEEEEEeccccceeccCceeEEEeccC------CccccCCccccccCCCCCceEecCCCEEEEEEECC
Confidence 46788899 5999999999877432 223445543111 01123444433221 12356788999999999999
Q ss_pred CCCCeEEEEeCCeeeEeccc-------C---------------------------------CCCCCeeeeCCceeEeecC
Q psy16421 77 SPPPSIMWRREGGEMITNSF-------N---------------------------------NTVPPIVKIPSQLIGAHEG 116 (151)
Q Consensus 77 ~~~~~~~W~~~~~~~~~~~~-------~---------------------------------~~~~p~~~~~~~~~~~~~g 116 (151)
.|.+.+.|++ ++..+.... . +..+|.+...+....+.+|
T Consensus 249 ~p~~~v~W~~-~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g 327 (404)
T 3p3y_A 249 VPTPDIAWYK-KGGDLPSDKAKFENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPG 327 (404)
T ss_dssp SSCCEEEEEE-TTBCCCTTTEEEEGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECCCCEEECTT
T ss_pred CCCCcEEEEE-CCEECCCCcccccccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccCCcceeecC
Confidence 9999999999 454433211 0 2345666667777888999
Q ss_pred CcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 117 QQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 117 ~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
+.+.|.|.+.|.|.|.+.|+|+|..+..+
T Consensus 328 ~~~~l~C~~~g~p~p~v~W~~~g~~~~~~ 356 (404)
T 3p3y_A 328 EDGRLVCRANGNPKPTVQWMVNGEPLQSA 356 (404)
T ss_dssp CCEEEECEEEEESCCEEEEEETTEEGGGS
T ss_pred CcEEEEEEccccCCCceEEEECCEecCCC
Confidence 99999999999999999999998776543
No 17
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.75 E-value=2.5e-17 Score=117.23 Aligned_cols=126 Identities=25% Similarity=0.396 Sum_probs=89.3
Q ss_pred cccccCCeEEEEEEEcCC-CCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCe
Q psy16421 3 EVSREHMGAYLCIASNGV-PPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPS 81 (151)
Q Consensus 3 ~v~~~d~G~Y~C~~~~~~-~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~ 81 (151)
+++.+|+|.|+|.+.+.. +...+..+.+.|. .+|.+...+ ....+.+|+++.|.|.+.+.|.+.
T Consensus 88 ~~~~~D~G~Y~C~~~~~~~~~~~s~~~~l~v~-------------~p~~~~~~~--~~~~~~~G~~v~l~C~~~~~p~~~ 152 (403)
T 3laf_A 88 RHHKPDEGLYQCEASLGDSGSIISRTAKVMVA-------------GPLRFLSQT--ESITAFMGDTVLLKCEVIGDPMPT 152 (403)
T ss_dssp TTBCSSCEEEEEEEECGGGCEEECCCEEEEEC-------------CCCEECSCC--CCEEEETTSCEEECCCEECSSCCE
T ss_pred CCCCCcceEEEEEEEeCCCccEEEEEEEEEec-------------CCCccccCC--CcEEEEcCCeEEEEEEEcccCCCe
Confidence 347889999999999653 3233445555543 566665555 567888999999999999999999
Q ss_pred EEEEeCCeeeEeccc----------C----------------------------------CCCCC------eeeeCCcee
Q psy16421 82 IMWRREGGEMITNSF----------N----------------------------------NTVPP------IVKIPSQLI 111 (151)
Q Consensus 82 ~~W~~~~~~~~~~~~----------~----------------------------------~~~~p------~~~~~~~~~ 111 (151)
+.|++ +++.+.... . +..+| .+...+...
T Consensus 153 v~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~ 231 (403)
T 3laf_A 153 IHWQK-NQQDLNPIPGDSRVVVLPSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNV 231 (403)
T ss_dssp EEEEE-SSSBCCCCTTCCSEEECTTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCE
T ss_pred EEEEE-CCEeccccCCceEEEEcCCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCce
Confidence 99999 444432100 0 00111 233345566
Q ss_pred EeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 112 GAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 112 ~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
.+.+|+.+.|.|.+.|.|.+.+.|+|++..+..
T Consensus 232 ~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 264 (403)
T 3laf_A 232 IAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQL 264 (403)
T ss_dssp EEETTSCEEECCEEEEESCCEEEEEETTEECCC
T ss_pred EecCCCcEEEEEEcCCCCCCeEEEEECCeeccC
Confidence 788999999999999999999999998766543
No 18
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.75 E-value=2.8e-17 Score=116.98 Aligned_cols=128 Identities=28% Similarity=0.470 Sum_probs=88.7
Q ss_pred cccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeee-cCCCCCe
Q psy16421 3 EVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA-SGSPPPS 81 (151)
Q Consensus 3 ~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~~~~~ 81 (151)
+++.+|+|.|+|.+.|..|...+..+.|.|. .+|.+..... ....+.+|+.+.|.|.+ .+.|.+.
T Consensus 83 ~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~V~-------------~~p~~~~~~~-~~~~v~~G~~v~l~C~~~~~~p~~~ 148 (404)
T 3p3y_A 83 GRPEEYEGEYQCFARNKFGTALSNRIRLQVS-------------KSPLWPKENL-DPVVVQEGAPLTLQCNPPPGLPSPV 148 (404)
T ss_dssp CCTTSSCEEEEEEEECSSCEEEEEEEEEEEC-------------CCCCCCCCCC-CCEEEETTSCEEECCCCCCCSSCCE
T ss_pred CCCccCCEEEEEEEEcCCCeEeeeeEEEEEe-------------ccCccccCCC-CCeEEccCCcEEEEeCCCCCCCCCe
Confidence 6788999999999999988544556666653 3443322221 45788899999999998 8889999
Q ss_pred EEEEeCCeeeEecccC----------------------------C-----------------------CCCCeeeeCC--
Q psy16421 82 IMWRREGGEMITNSFN----------------------------N-----------------------TVPPIVKIPS-- 108 (151)
Q Consensus 82 ~~W~~~~~~~~~~~~~----------------------------~-----------------------~~~p~~~~~~-- 108 (151)
+.|++++...+..... + ..+|.+....
T Consensus 149 v~W~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~ 228 (404)
T 3p3y_A 149 IFWMSSSMEPITQDKRVSQGHNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGT 228 (404)
T ss_dssp EEEECTTSCBCCCCSSEEECTTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSS
T ss_pred EEEeCCCccccCCCCcEEEcCCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCC
Confidence 9999954333221110 0 0112222211
Q ss_pred -ceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 109 -QLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 109 -~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
....+.+|+.+.|.|.+.|.|.+.+.|+|+|..+..
T Consensus 229 ~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~ 265 (404)
T 3p3y_A 229 ASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLPS 265 (404)
T ss_dssp EEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCCT
T ss_pred CCCceEecCCCEEEEEEECCCCCCcEEEEECCEECCC
Confidence 245688999999999999999999999999876543
No 19
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.74 E-value=7.7e-18 Score=116.60 Aligned_cols=126 Identities=21% Similarity=0.303 Sum_probs=85.0
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeee-cCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA-SGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~~~ 79 (151)
|.+++.+|+|.|+|.+.+..+...+..+.| .+..+|.+.... ....+..++.+.+.|.+ .+.|.
T Consensus 83 I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l-------------~v~~~P~~~~~~--~~~~~~~~~~~~~~C~~~~~~P~ 147 (313)
T 4fqp_A 83 MFGLRVEDEGNYTCLFVTFPQGSRSVDIWL-------------RVLAKPQNTAEV--QKVQLTGEPVPMARCVSTGGRPP 147 (313)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEEEEE-------------CCBBCCEEEEEE--CCBCCCSSCEEEEEEEEEEEBSC
T ss_pred ECcCChhhCEEEEEEEeeccCcceeeeeee-------------eeccCCcceecc--cceEeecCceEEEEEEccCccCC
Confidence 578999999999999866543233333333 334556655444 34556678889999985 57899
Q ss_pred CeEEEEeCCeeeEecccC------------------------------------------------CCCCCeeeeC-Cce
Q psy16421 80 PSIMWRREGGEMITNSFN------------------------------------------------NTVPPIVKIP-SQL 110 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~------------------------------------------------~~~~p~~~~~-~~~ 110 (151)
+.+.|+++ +..+..... +..+|.+.+. ...
T Consensus 148 ~~i~W~~~-~~~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~ 226 (313)
T 4fqp_A 148 AQITWHSD-LGGMPNTSQVPGFLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDN 226 (313)
T ss_dssp CEEEEEET-TCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCS
T ss_pred cEEEeecC-CccccccceeeeecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccccc
Confidence 99999994 333221100 2234555433 344
Q ss_pred eEeecCCcEEEEeeecccCCC-eeEEEcCCcee
Q psy16421 111 IGAHEGQQLVLECISEAYPKS-VNYWTREKGDM 142 (151)
Q Consensus 111 ~~~~~g~~~~l~C~~~g~p~~-~~~W~k~~~~~ 142 (151)
..+.+|+.+.|.|.+.|+|.| .|.|+|+|+.+
T Consensus 227 ~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~l 259 (313)
T 4fqp_A 227 NWYLGQNEATLTCDARSNPEPTGYNWSTTMGPL 259 (313)
T ss_dssp CEETTCCCEEEEEEEEEESCCCEEEEEETTBSC
T ss_pred eeecCCCeEEEEEEecCCCCCcEEEEEECCEEC
Confidence 456778999999999999999 59999998755
No 20
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.74 E-value=2e-18 Score=119.16 Aligned_cols=127 Identities=18% Similarity=0.322 Sum_probs=85.2
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCee--EeCCCCCceEeecCCeEEEEee-ecCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDI--LDYPTSSDIMVREGSNVSMRCA-ASGS 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~g~~~~l~C~-~~g~ 77 (151)
|.+++.+|+|.|+|.|.|..+...+..+.+.+. ..|.. ...+ .......|+.+.|.|. +.|.
T Consensus 78 I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~v~-------------~~~~~~~~~~~--~~~~~~~~~~~~l~C~~~~g~ 142 (308)
T 4fom_A 78 LHNIGFSDSGKYICKAVTFPLGNAQSSTTVTVL-------------VEPTVSLIKGP--DSLIDGGNETVAAICIAATGK 142 (308)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEEEEEEEEEE-------------BCCEEEEEECS--SCCCTTCSCEEEEEEEEEEEB
T ss_pred EccCCHHHCEEEEEEEeeCCCcceeeeeEEEee-------------ecccccccccc--ceeEEcCCceEEEEEEecCCc
Confidence 578999999999999998754344445555543 22222 2222 3445567889999998 4789
Q ss_pred CCCeEEEEeCCeeeEecccC----------------------------------------------CCCCCeeeeC-Cce
Q psy16421 78 PPPSIMWRREGGEMITNSFN----------------------------------------------NTVPPIVKIP-SQL 110 (151)
Q Consensus 78 ~~~~~~W~~~~~~~~~~~~~----------------------------------------------~~~~p~~~~~-~~~ 110 (151)
|.+.+.|+++ ++.+..... +..+|.+... ...
T Consensus 143 P~~~i~W~~~-~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~ 221 (308)
T 4fom_A 143 PVAHIDWEGD-LGEMESTTTSFPNETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDG 221 (308)
T ss_dssp SCCEEEECCC-SSBCCEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCS
T ss_pred CCceEEEEEC-CcccccccceeeeecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccce
Confidence 9999999994 443321100 2234444433 334
Q ss_pred eEeecCCcEEEEeeecccCCC-eeEEEcCCceec
Q psy16421 111 IGAHEGQQLVLECISEAYPKS-VNYWTREKGDMI 143 (151)
Q Consensus 111 ~~~~~g~~~~l~C~~~g~p~~-~~~W~k~~~~~~ 143 (151)
..+..|+.+.|.|.+.|.|+| .+.|+|++..+.
T Consensus 222 ~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~~~ 255 (308)
T 4fom_A 222 NWFVGRKGVNLKCNADANPPPFKSVWSRLDGQWP 255 (308)
T ss_dssp CEETTCCSCEEECCEEEESCEEEEECCBSSSCCC
T ss_pred eeeeccccEEEEEEEecCCCCcEEEEEECCeECC
Confidence 456778999999999999998 599999876553
No 21
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.74 E-value=1.5e-17 Score=122.40 Aligned_cols=134 Identities=17% Similarity=0.296 Sum_probs=95.7
Q ss_pred CccccccCCe-EEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMG-AYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G-~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++.+|+| .|+|.+.|..+...+..+.|.|. .....+|.+...+ ....+.+|+.+.|.|.+.+.|.
T Consensus 172 i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~---------~~~~~~p~i~~~~--~~~~v~~G~~v~L~C~~~g~p~ 240 (524)
T 2ec8_A 172 IKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVR---------PAFKAVPVVSVSK--ASYLLREGEEFTVTCTIKDVSS 240 (524)
T ss_dssp EESCCGGGTTCEEEEEEC----CCCCCCEECCEE---------CCCCSCCEEECSC--SEEEEETTSCEEEEEEEEESST
T ss_pred EeccchhhCCceEEEEEEECCceEEEEEEEEEEE---------eCCCCCCcEEecC--CcceEEcCCcEEEEEEEecCCC
Confidence 4678999999 99999999877555557777664 1223678887766 5668889999999999999888
Q ss_pred Ce-EEEEeCCeee-Eecc-------c-C--------------------------------------CCCCCeeeeCC---
Q psy16421 80 PS-IMWRREGGEM-ITNS-------F-N--------------------------------------NTVPPIVKIPS--- 108 (151)
Q Consensus 80 ~~-~~W~~~~~~~-~~~~-------~-~--------------------------------------~~~~p~~~~~~--- 108 (151)
+. +.|++++... +... . . +..+|.+...+
T Consensus 241 p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~ 320 (524)
T 2ec8_A 241 SVYSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMIN 320 (524)
T ss_dssp TCEEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSC
T ss_pred cEEEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCC
Confidence 87 9999954431 1100 0 0 23455554432
Q ss_pred ceeEeecCCcEEEEeeecccCCCe-eEEEcCCceeccC
Q psy16421 109 QLIGAHEGQQLVLECISEAYPKSV-NYWTREKGDMIAN 145 (151)
Q Consensus 109 ~~~~~~~g~~~~l~C~~~g~p~~~-~~W~k~~~~~~~~ 145 (151)
....+.+|+.+.|.|.+.|.|.|. +.|+|+|..+...
T Consensus 321 ~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~ 358 (524)
T 2ec8_A 321 TTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDK 358 (524)
T ss_dssp SEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSS
T ss_pred ceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCC
Confidence 367889999999999999999999 9999998766543
No 22
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.73 E-value=8.4e-18 Score=121.38 Aligned_cols=122 Identities=12% Similarity=0.211 Sum_probs=86.6
Q ss_pred cccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CCCCeEE
Q psy16421 5 SREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SPPPSIM 83 (151)
Q Consensus 5 ~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~~~~~~ 83 (151)
...|+|.|+|.|.|..|......+.|.| ..+|.+ .+ ....+.+|+.+.|.|.+.| .|.|.+.
T Consensus 199 ~~~d~G~Y~C~A~N~~G~~~~~~~~l~V-------------~~~p~~--~~--~~~~v~~G~~v~L~C~~~g~~p~p~i~ 261 (423)
T 3qs7_E 199 HELFGTDIRCCARNELGRECTRLFTIDL-------------NQTPQT--TL--PQLFLKVGEPLWIRCKAVHVNHGFGLT 261 (423)
T ss_dssp CCCCSSCEEEEEECSSCEEEEECEEEES-------------SSCCCS--ST--TEEEEETTSCEEEEEEEEESSSCCCEE
T ss_pred ecccCeEEEEEEEcCCCCcceeeEEEEE-------------ecCCcc--CC--CceEEeCCCeEEEEEEEEcCCCCcEEE
Confidence 4689999999999998854333344443 334433 22 3567889999999999988 6779999
Q ss_pred EEeCCeeeEecc----------c-------C-----------------------------CCCCCeeeeCC--ceeEeec
Q psy16421 84 WRREGGEMITNS----------F-------N-----------------------------NTVPPIVKIPS--QLIGAHE 115 (151)
Q Consensus 84 W~~~~~~~~~~~----------~-------~-----------------------------~~~~p~~~~~~--~~~~~~~ 115 (151)
|+++ ++.+... . . +..+|.+...+ ....+.+
T Consensus 262 W~k~-g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~~~~~~L~V~~~p~i~~~~~~~~~~v~~ 340 (423)
T 3qs7_E 262 WELE-NKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGFINATNSSEDYEIDQ 340 (423)
T ss_dssp EEES-SSBCCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTEEEEEEEEEEESSCEEEEC---CEECCCT
T ss_pred EEEC-CEEccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecCCCceEEEEEEeCCcceEcCCCccEEecC
Confidence 9994 4432111 0 0 22345554433 3556789
Q ss_pred CCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 116 GQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 116 g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
|+++.|.|.+.|.|.|.++|+|+|..+..
T Consensus 341 G~~v~l~C~~~g~P~p~i~W~k~g~~l~~ 369 (423)
T 3qs7_E 341 YEEFCFSVRFKAYPQIRCTWTFSRKSFPC 369 (423)
T ss_dssp TCCCCEEEEEEEESCCEEEEEETTEEEEC
T ss_pred CCeEEEEEEEEEcCCCeEEEEECCEECCC
Confidence 99999999999999999999999877644
No 23
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.73 E-value=8.9e-17 Score=120.89 Aligned_cols=128 Identities=18% Similarity=0.280 Sum_probs=90.5
Q ss_pred CccccccCCeEEEEEEEcCCCCCC-ccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSV-SKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++.+|+|.|+|.|.|..|... +..+.+.|.. ...+|.+... ....+.+|+.+.|.|.+.+ +.
T Consensus 430 i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~----------~~~~p~i~~~---~~~~v~~g~~v~l~C~~~~-~~ 495 (642)
T 1e07_A 430 ISNITEKNSGLYTCQANNSASGHSRTTVKTITVSA----------ELPKPSISSN---NSKPVEDKDAVAFTCEPEA-QN 495 (642)
T ss_pred EccCChhhCeEEEEEEEcCCCCCcccceEEEEEec----------cCCCceEecC---CceeecCCCeEEEEEECCC-CC
Confidence 567899999999999999987432 2223444421 1234555442 3466779999999999985 88
Q ss_pred CeEEEEeCCeeeEecccC------------------------------------------C-CCCCeeeeCCceeEeecC
Q psy16421 80 PSIMWRREGGEMITNSFN------------------------------------------N-TVPPIVKIPSQLIGAHEG 116 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~------------------------------------------~-~~~p~~~~~~~~~~~~~g 116 (151)
+.+.|++ +++.+....+ + ..|+.+...+....+.+|
T Consensus 496 ~~i~W~~-~g~~l~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~~~~~v~~g 574 (642)
T 1e07_A 496 TTYLWWV-NGQSLPVSPRLQLSNGNRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLYGPDTPIISPPDSSYLSG 574 (642)
T ss_pred cEEEEEE-CCEeCCCCCcEEEcCCCcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEeCCCcceecCCceeEEcC
Confidence 9999999 5555432110 0 123334445566778999
Q ss_pred CcEEEEeeecccCCCeeEEEcCCceec
Q psy16421 117 QQLVLECISEAYPKSVNYWTREKGDMI 143 (151)
Q Consensus 117 ~~~~l~C~~~g~p~~~~~W~k~~~~~~ 143 (151)
+.+.|.|.+.|.|.|.+.|+|||..+.
T Consensus 575 ~~~~l~C~~~g~p~p~v~W~~~g~~i~ 601 (642)
T 1e07_A 575 ANLNLSCHSASNPSPQYSWRINGIPQQ 601 (642)
T ss_pred CcEEEEEEeccCCCCeEEEEECCEECc
Confidence 999999999999999999999977654
No 24
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.73 E-value=3.8e-17 Score=116.04 Aligned_cols=137 Identities=16% Similarity=0.271 Sum_probs=90.2
Q ss_pred CccccccCCe---EEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC
Q psy16421 1 MTEVSREHMG---AYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS 77 (151)
Q Consensus 1 i~~v~~~d~G---~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~ 77 (151)
|.+++.+|+| .|+|.+.|..+.... .....................+|.+. + ....+.+|+.+.|.|.+.|.
T Consensus 165 i~~v~~~d~G~~~~Y~C~a~n~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~p~~~--~--~~~~~~~G~~v~l~C~~~g~ 239 (395)
T 1bih_A 165 FTIVTKEDVSDIYKYVCTAKNAAVDEEV-VLVEYEIKGVTKDNSGYKGEPVPQYV--S--KDMMAKAGDVTMIYCMYGSN 239 (395)
T ss_dssp EEEECGGGCCSSEEEEEEEECTTCSSCE-EEEEEEECCCBCCSSCCCCCCEEEEE--C--CSEEEETTSCEEEEEEEECS
T ss_pred EEEEeeccCCCceEEEEEEEecccceEE-EeeeEEecccccccccccCCcCceec--C--CceEEECCCcEEEEEEeccC
Confidence 4578899999 999999999884322 21111100000000000001133332 2 46788899999999999999
Q ss_pred CCCeEEEEeCCeeeEeccc-------------C---------------------------------CCCCCeeeeCCce-
Q psy16421 78 PPPSIMWRREGGEMITNSF-------------N---------------------------------NTVPPIVKIPSQL- 110 (151)
Q Consensus 78 ~~~~~~W~~~~~~~~~~~~-------------~---------------------------------~~~~p~~~~~~~~- 110 (151)
|.+.+.|++ +++.+.... . +..+|.+...+..
T Consensus 240 p~~~i~W~~-~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V~~~P~~~~~~~~~ 318 (395)
T 1bih_A 240 PMGYPNYFK-NGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTVVSAPKYEQKPEKV 318 (395)
T ss_dssp SCCCCEEEE-TTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEEEEEEEEEECCCSE
T ss_pred CCCeEEEEE-CCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEEEcCCccccCCCcc
Confidence 999999999 455443210 0 1234555555555
Q ss_pred eEeecCCcEEEEeeecccCCCeeEEEcCCceec
Q psy16421 111 IGAHEGQQLVLECISEAYPKSVNYWTREKGDMI 143 (151)
Q Consensus 111 ~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~ 143 (151)
..+.+|+++.|.|.+.|.|.|.+.|+|+|..+.
T Consensus 319 ~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~ 351 (395)
T 1bih_A 319 IVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLS 351 (395)
T ss_dssp EEECTTSCEEEECEEEEESCCCCEEEETTEECC
T ss_pred eEecCCCeEEEEEEECcccCCeeEEEECCEECC
Confidence 678999999999999999999999999977654
No 25
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.73 E-value=2e-17 Score=115.43 Aligned_cols=129 Identities=12% Similarity=0.203 Sum_probs=86.2
Q ss_pred CccccccCCe-EEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCC-
Q psy16421 1 MTEVSREHMG-AYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSP- 78 (151)
Q Consensus 1 i~~v~~~d~G-~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~- 78 (151)
|.+++.+|+| .|+|.|.|..|......+. .+. ..+|.+.... ....+.+|+.+.|.|.+.|.|
T Consensus 93 i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~~~-~v~------------~~~p~~~~~~--~~~~~~~G~~v~L~C~~~g~p~ 157 (329)
T 3oq3_B 93 IANYTSNDSHRRYLCTVTTKNGDCVQGIVR-SHI------------RKPPSCIPET--YELGTHDKYGIDLYCGILYAKH 157 (329)
T ss_dssp ESSCCGGGGGCCEEEEEECTTSCEEEEEEE-EEE------------CCCCSCEEEE--EETTSSTTTCEEEECCCCSCCC
T ss_pred EcCCChHhCCCcEEEEEEeCCCceeeEEEE-EEE------------cCCCcEeccc--cceEEeCCCcEEEEeccCCCCC
Confidence 5688999999 9999999988742222222 221 2344433322 123356799999999999999
Q ss_pred CCeEEEEeCCeeeEeccc-C--------------------------CC-------------------CCC----eeeeCC
Q psy16421 79 PPSIMWRREGGEMITNSF-N--------------------------NT-------------------VPP----IVKIPS 108 (151)
Q Consensus 79 ~~~~~W~~~~~~~~~~~~-~--------------------------~~-------------------~~p----~~~~~~ 108 (151)
.+.+.|++ ++..+.... . +. .+| .+. .+
T Consensus 158 ~~~i~W~k-~~~~l~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~-~~ 235 (329)
T 3oq3_B 158 YNNITWYK-NNQELIIDGTKYSQSGQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI-LD 235 (329)
T ss_dssp CCEEEEEE-TTEECCCSSSSEEEETTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE-CC
T ss_pred CceEEEEE-CCccCCCCCceEecCCCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee-cC
Confidence 89999999 455442110 0 10 111 111 34
Q ss_pred ceeEeecCCcEEEEeeecccC---CC-eeEEEcCCceeccCC
Q psy16421 109 QLIGAHEGQQLVLECISEAYP---KS-VNYWTREKGDMIANG 146 (151)
Q Consensus 109 ~~~~~~~g~~~~l~C~~~g~p---~~-~~~W~k~~~~~~~~~ 146 (151)
....+.+|+++.|.|.+.|.| .| .+.|+|+|..+...+
T Consensus 236 ~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g~~i~~~~ 277 (329)
T 3oq3_B 236 PKINVTIGEPANITCTAVSTSLLVDDVLIDWENPSGWIIGLD 277 (329)
T ss_dssp SEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTTSCBCCBC
T ss_pred CeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECCeeeeccC
Confidence 456788999999999999998 77 799999988754433
No 26
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.73 E-value=4.8e-17 Score=119.75 Aligned_cols=130 Identities=17% Similarity=0.308 Sum_probs=88.0
Q ss_pred CccccccCCeEEEEEEEcCCCCC--CccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPS--VSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSP 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~--~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~ 78 (151)
|.+++.+|+|.|+|.+.|..|.. ....+.|.|.. ....+|.+...+ ....+.+|+.+.|.|.+.|.+
T Consensus 74 I~~v~~~D~G~Y~C~a~n~~g~~~~~~~~~~l~V~~---------~~~~~P~~~~~~--~~~~~~~g~~v~l~C~~~g~~ 142 (523)
T 2rcj_C 74 ISGLEAEDESDYYCASWNSSDNSYVFGTGTKVTVLG---------QPKANPTVTLFP--PSSEELQANKATLVCLISDFY 142 (523)
T ss_pred ECCCChhhCEEEEEEEccCCCccccccCceEEEecc---------CCCcCCeEEecC--CcccccCCCceEEEEEecccc
Confidence 57899999999999999986532 22445665531 113566666554 344566799999999999877
Q ss_pred CC--eEEEEeCCeeeEecc----------c-------------------C------------------------CCCCCe
Q psy16421 79 PP--SIMWRREGGEMITNS----------F-------------------N------------------------NTVPPI 103 (151)
Q Consensus 79 ~~--~~~W~~~~~~~~~~~----------~-------------------~------------------------~~~~p~ 103 (151)
++ .+.|++ +++.+... . + ...+|.
T Consensus 143 p~~~~v~W~k-~g~~l~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~ 221 (523)
T 2rcj_C 143 PGAVTVAWKA-DGSPVKAGVETTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPS 221 (523)
T ss_pred CCceEEEEec-CCCCCCCceEeccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCE
Confidence 54 899999 55443210 0 0 012344
Q ss_pred eeeCCceeEeecCCcEEEEeeeccc-CCC-eeEEEcCCcee
Q psy16421 104 VKIPSQLIGAHEGQQLVLECISEAY-PKS-VNYWTREKGDM 142 (151)
Q Consensus 104 ~~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~~~W~k~~~~~ 142 (151)
+........+.+|+.+.|.|.+.|. |.| .++|+|+|..+
T Consensus 222 v~~~~~~~~~~~G~~~~l~C~~~g~~P~p~~v~W~k~g~~~ 262 (523)
T 2rcj_C 222 VFPLAPSSKSTSGGTAALGCLVKDYFPQPVTVSWNSGALTS 262 (523)
T ss_pred EEecCCCcccccCCceEEEEEEeceeCCCeEEEEecCCccc
Confidence 4433333456799999999999986 878 79999997653
No 27
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.73 E-value=2.7e-17 Score=121.65 Aligned_cols=116 Identities=16% Similarity=0.241 Sum_probs=77.8
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.|.|. .+..+.|.| ..+|.+...+....+.+.+|+.+.|.|.+.|.|.|
T Consensus 294 I~~v~~~DsG~Y~C~a~N~----~~~~~~L~V-------------~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~p 356 (527)
T 3qs9_E 294 VSSVARNDTGYYTCSSSKH----PSQSALVTI-------------VEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQI 356 (527)
T ss_dssp ESSCCGGGCEEEEEEETTE----EEEEEEEEE-------------C--CEEECCCSCCEECCCTTCCCCEEEEEEEESCC
T ss_pred EccCCcccCeEEEEEEEeC----CCceEEEEE-------------EccCccccccCcccEEEcCCCeEEEEEEEEecCCC
Confidence 5688999999999999887 344455554 34555544432234667789999999999999999
Q ss_pred eEEEEeCCeeeEecccC---------------------------------------CCCCCeeeeCCceeEeecCCcEEE
Q psy16421 81 SIMWRREGGEMITNSFN---------------------------------------NTVPPIVKIPSQLIGAHEGQQLVL 121 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~---------------------------------------~~~~p~~~~~~~~~~~~~g~~~~l 121 (151)
.+.|++ +++.+..... +..+|.|.... ....|
T Consensus 357 ~i~W~k-~g~~l~~~~~~~~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~~~P~i~~~~--------~~~~l 427 (527)
T 3qs9_E 357 RCTWTF-SRKSFPCEQKGLDNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIRRKPQVLAEA--------SASQA 427 (527)
T ss_dssp EEEEEE-TTEEEECBCCBCSSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC--CCCEEEECC--------CCE--
T ss_pred EEEEEE-CCEECcCCcccccCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEecCCeEEEeC--------CCCEE
Confidence 999999 6666643321 23445554432 12357
Q ss_pred EeeecccCCCeeEEEcCCcee
Q psy16421 122 ECISEAYPKSVNYWTREKGDM 142 (151)
Q Consensus 122 ~C~~~g~p~~~~~W~k~~~~~ 142 (151)
.|.+.|.|.|.|+|+++++..
T Consensus 428 ~C~a~g~P~p~i~W~~~~~~~ 448 (527)
T 3qs9_E 428 SCFSDGYPLPSWTWKKCSDKS 448 (527)
T ss_dssp -EEEECSSCCEEEEECCC---
T ss_pred EEEEEEEcCCeEEEEECCCCc
Confidence 999999999999999876543
No 28
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.72 E-value=3.6e-17 Score=113.73 Aligned_cols=129 Identities=21% Similarity=0.314 Sum_probs=87.6
Q ss_pred CccccccCCeEEEEEEE-cCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecC---CeEEEEee-ec
Q psy16421 1 MTEVSREHMGAYLCIAS-NGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREG---SNVSMRCA-AS 75 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~-~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g---~~~~l~C~-~~ 75 (151)
|.+++.+|+|.|+|.+. +..+ .....+.|.|. .+|.+........+.+.+| +.+.|.|. +.
T Consensus 96 I~~v~~~D~G~Y~C~~~~~~~~-~~~~~~~l~V~-------------~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~ 161 (331)
T 3u83_A 96 LSRLELEDEGVYICEFATFPTG-NRESQLNLTVM-------------AKPTNWIEGTQAVLRAKKGQDDKVLVATCTSAN 161 (331)
T ss_dssp ECSCCGGGCEEEEEEEEEETTE-EEEEEEEEEEE-------------BCCEEEEEECSSCEEECTTCCCCEEEEEEEEEE
T ss_pred EcccCcccCcEEEEEEEecCCC-ccEEEEEEEEe-------------cCCcceeecCCCceeecCCCccceEEEEEEecC
Confidence 56889999999999854 4444 45555666554 4555533222256777788 78999998 88
Q ss_pred CCCCCeEEEEeCCe-eeEe----cccC---------------------------------------CCCCCeeeeC-Cce
Q psy16421 76 GSPPPSIMWRREGG-EMIT----NSFN---------------------------------------NTVPPIVKIP-SQL 110 (151)
Q Consensus 76 g~~~~~~~W~~~~~-~~~~----~~~~---------------------------------------~~~~p~~~~~-~~~ 110 (151)
+.|.+.+.|++++. .... .... +..+|.+... ...
T Consensus 162 ~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~ 241 (331)
T 3u83_A 162 GKPPSVVSWETRLKGEAEYQEIRNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDG 241 (331)
T ss_dssp EBSCCEEEEEESSCCEEEEEEEECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCS
T ss_pred CcCCceEEEEcCCCCccccceeECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCC
Confidence 89999999998321 1100 0000 1234554433 344
Q ss_pred eEeecCCcEEEEeeecccCCCe-eEEEcCCceec
Q psy16421 111 IGAHEGQQLVLECISEAYPKSV-NYWTREKGDMI 143 (151)
Q Consensus 111 ~~~~~g~~~~l~C~~~g~p~~~-~~W~k~~~~~~ 143 (151)
..+.+|+.+.|.|.+.|.|.|. +.|+|++..+.
T Consensus 242 ~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~~~ 275 (331)
T 3u83_A 242 NWYLQRMDVKLTCKADANPPATEYHWTTLNGSLP 275 (331)
T ss_dssp CCBTTCCCEEEEEEEEEESCCCEEEEEETTBSCC
T ss_pred ceEeCCCeEEEEEeCcCCCCCCEEEEEECCCccc
Confidence 4578899999999999999998 99999877553
No 29
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.72 E-value=2.2e-17 Score=122.12 Aligned_cols=124 Identities=12% Similarity=0.213 Sum_probs=88.0
Q ss_pred ccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeec-CCCCCeE
Q psy16421 4 VSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAAS-GSPPPSI 82 (151)
Q Consensus 4 v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-g~~~~~~ 82 (151)
+...|+|.|+|.|.|..|......+.|.| ..+|.+ .+ ....+.+|+.+.|.|.+. +.|.+.+
T Consensus 198 ~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V-------------~~~p~~--~p--~~~~v~~G~~v~L~C~~~~g~p~p~i 260 (527)
T 3qs9_E 198 LHELFGTDIRCCARNELGRECTRLFTIDL-------------NQTPQT--TL--PQLFLKVGEPLWIRCKAVHVNHGFGL 260 (527)
T ss_dssp ECCCCSSCEEEEEECSSCEEEEECEEEES-------------SSCCCC--SC--CEEEECTTSCEEEEEEEEESSSCCCE
T ss_pred ccccCCEEEEEEEEeCCCcccceEEEEEE-------------eccCcc--CC--CceEEeCCCeEEEEEEEccCCCCeEE
Confidence 45789999999999998854443345443 344544 22 467888999999999996 8999999
Q ss_pred EEEeCCeeeEecc-----------------------cC-----------------------CCCCCeeeeCC--ceeEee
Q psy16421 83 MWRREGGEMITNS-----------------------FN-----------------------NTVPPIVKIPS--QLIGAH 114 (151)
Q Consensus 83 ~W~~~~~~~~~~~-----------------------~~-----------------------~~~~p~~~~~~--~~~~~~ 114 (151)
.|+++ ++.+... .- +..+|.+...+ ....+.
T Consensus 261 ~W~k~-g~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~~~~~~~L~V~~~p~i~~~~~~~~~~v~ 339 (527)
T 3qs9_E 261 TWELE-NKALEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKHPSQSALVTIVEKGFINATNSSEDYEID 339 (527)
T ss_dssp EEECS-SSCCCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTEEEEEEEEEEC--CEEECCCSCCEECCC
T ss_pred EEEEC-CEECCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeCCCceEEEEEEccCccccccCcccEEEc
Confidence 99994 4432110 00 22344444332 345678
Q ss_pred cCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 115 EGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 115 ~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
+|+.+.|.|.+.|.|.|.++|+|+|..+..+
T Consensus 340 ~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~ 370 (527)
T 3qs9_E 340 QYEEFCFSVRFKAYPQIRCTWTFSRKSFPCE 370 (527)
T ss_dssp TTCCCCEEEEEEEESCCEEEEEETTEEEECB
T ss_pred CCCeEEEEEEEEecCCCEEEEEECCEECcCC
Confidence 8999999999999999999999998776543
No 30
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.72 E-value=1.9e-17 Score=114.08 Aligned_cols=138 Identities=10% Similarity=0.083 Sum_probs=88.5
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeec-CCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAAS-GSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-g~~~ 79 (151)
|.+++.+|+|.|+|.+.|..|... .+.+.|........ ......+|.+...+. ....+.+|+.+.|.|.+. +.|.
T Consensus 62 I~~~~~~D~G~Y~C~~~n~~g~~~--s~~l~v~~~~~~~~-~~~~~~~p~~~~~~~-~~~~v~~G~~v~l~C~~~~~~p~ 137 (312)
T 2y23_A 62 FKDLGMDDLGIYSCDVTDTDGIAS--SYLIDEEELKRLLA-LSHEHKFPTVPVKSE-LAVEILEKGQVRFWMQAEKLSGN 137 (312)
T ss_dssp ESSCCGGGCEEEEEEESSSCCCCE--EEEECHHHHHHHHH-HHHHHHSCBCCEEEE-EEEEECSSSCEEEEEEESCCCSS
T ss_pred ECcCCccCCEEEEEEEEeCCCcEE--EEEEEEeeeeeeec-ccccCCCCccccccC-CceEEeeCCCEEEEEEEEeCCCC
Confidence 568999999999999999887322 34443320000000 000000444433221 256788999999999998 8999
Q ss_pred CeEEEEeCCeeeEecccC--------------------------------C-----------------------------
Q psy16421 80 PSIMWRREGGEMITNSFN--------------------------------N----------------------------- 98 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~--------------------------------~----------------------------- 98 (151)
+.+.|++ ++..+....+ .
T Consensus 138 ~~v~W~~-~~~~i~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (312)
T 2y23_A 138 AKVNYIF-NEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQE 216 (312)
T ss_dssp CEEEEEE-TTEEECSSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHH
T ss_pred CEEEEEE-CCEECeeCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccc
Confidence 9999999 5555443211 0
Q ss_pred ---CCCCeeeeCCceeEeecCCcEEEEeeecccCCC-eeEEEcCCceecc
Q psy16421 99 ---TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKS-VNYWTREKGDMIA 144 (151)
Q Consensus 99 ---~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~~~W~k~~~~~~~ 144 (151)
..+|.|.... ...+.+|+++.|.|.+.|.|.| .+.|+|+|..+..
T Consensus 217 ~~~~~~p~~~~~~-~~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~ 265 (312)
T 2y23_A 217 WIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISV 265 (312)
T ss_dssp HHHHHSSEEEEEE-EEEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEE
T ss_pred hhhccCCceeecc-eEEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCC
Confidence 0013332221 2578899999999999999998 8999999877654
No 31
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.72 E-value=2.2e-17 Score=115.78 Aligned_cols=129 Identities=19% Similarity=0.312 Sum_probs=77.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCC--CCCceEeecCCeEEEEeee----
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYP--TSSDIMVREGSNVSMRCAA---- 74 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~g~~~~l~C~~---- 74 (151)
|.+++.+|+|.|+|.|.|..+ .....+.|.|.. ++...... .+....+.+|+.+.|.|.+
T Consensus 83 i~~~~~~D~G~Y~C~a~n~~~-~~~~~~~l~V~~-------------~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~ 148 (349)
T 4dep_C 83 FRPTLLNDTGNYTCMLRNTTY-CSKVAFPLEVVQ-------------KDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGY 148 (349)
T ss_dssp ESSCCGGGCEEEEEEEECSSC-EEEEEEEEEEEC-------------CCTTSCCSCCCCEEEEETTCSEEEEECCSCTTS
T ss_pred EccCChhhCEEEEEEEecCCc-eEEEEEEEEEec-------------CCcccCcccccCcceeeecCccEEEEcCCCccc
Confidence 568899999999999999877 444556666642 22111100 0124567789999999985
Q ss_pred -cCCCCCeEEEEeCCeeeEecccC-------------------------------------------CCC------CCee
Q psy16421 75 -SGSPPPSIMWRREGGEMITNSFN-------------------------------------------NTV------PPIV 104 (151)
Q Consensus 75 -~g~~~~~~~W~~~~~~~~~~~~~-------------------------------------------~~~------~p~~ 104 (151)
.|.|.+.+.|++ +++.+..... +.. +|.+
T Consensus 149 ~~g~p~~~v~W~k-~~~~l~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i 227 (349)
T 4dep_C 149 FPSSVKPTITWYM-GCYKIQNFNNVIPEGMNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVI 227 (349)
T ss_dssp SCTTSCCEEEEEE-TTEECCSCSSEEEETTEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEE
T ss_pred ccCCCCceEEEee-CCEECCCccceeecCCEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeE
Confidence 778999999999 5665543111 001 4444
Q ss_pred eeCCcee--EeecCCcEEEEeeec----ccCCCeeEEEcCCceecc
Q psy16421 105 KIPSQLI--GAHEGQQLVLECISE----AYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 105 ~~~~~~~--~~~~g~~~~l~C~~~----g~p~~~~~W~k~~~~~~~ 144 (151)
....... .+.+|+++.|.|.+. |.|.|.+.|+++|..+..
T Consensus 228 ~~~~~~~~~~v~~G~~v~l~C~~~~~~~g~p~p~v~W~~~g~~l~~ 273 (349)
T 4dep_C 228 HSPNDHVVYEKEPGEELLIPCTVYFSFLMDSRNEVWWTIDGKKPDD 273 (349)
T ss_dssp C----------------CCCEEEEECCCTTCCCEEEEESSCC----
T ss_pred ecCCCceeEEEecCCcEEEEEEEEEccCCCCCCEEEEEECCEEccc
Confidence 4433222 678899999999998 678999999999876654
No 32
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.72 E-value=1.1e-17 Score=116.54 Aligned_cols=140 Identities=20% Similarity=0.242 Sum_probs=64.8
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEecccccee---------EEeecCCCCeeEeCCC--CCceEeecCCeEE
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKL---------YIYTSSMPPDILDYPT--SSDIMVREGSNVS 69 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~---------~~~~~~~~p~~~~~~~--~~~~~~~~g~~~~ 69 (151)
|.+++.+|+|.|+|.+.|. + ..+..+.|.|........ .......+|.+..... .....+.+|+.+.
T Consensus 65 i~~v~~~D~G~Y~C~a~n~-~-~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~ 142 (334)
T 1ry7_B 65 VLNASHEDSGAYSCRQRLT-Q-RVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVR 142 (334)
T ss_dssp --------------------------------------------------------CCCCSCCTTCCCCEEEEETTCCEE
T ss_pred EeecccccCEEEEEEEEeC-C-eEEEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEE
Confidence 5688999999999999998 5 455566666642110000 0000012344432211 1235778899999
Q ss_pred EEeeecCCCCCeEEEEeCCeeeEecccC--------------------------------------------CC----CC
Q psy16421 70 MRCAASGSPPPSIMWRREGGEMITNSFN--------------------------------------------NT----VP 101 (151)
Q Consensus 70 l~C~~~g~~~~~~~W~~~~~~~~~~~~~--------------------------------------------~~----~~ 101 (151)
|.|.+.|.|.+.+.|++ +++.+..... +. .+
T Consensus 143 l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~ 221 (334)
T 1ry7_B 143 FRCPAAGNPTPSISWLK-NGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHR 221 (334)
T ss_dssp EECCCCCSSCCEEECCB-TTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSS
T ss_pred EEEEccCCCCCeEEEEE-CCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCC
Confidence 99999999999999999 4554432110 00 12
Q ss_pred Ceeee-CCceeEeecCCcEEEEeeecccCCCeeEEEc----CCceec
Q psy16421 102 PIVKI-PSQLIGAHEGQQLVLECISEAYPKSVNYWTR----EKGDMI 143 (151)
Q Consensus 102 p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k----~~~~~~ 143 (151)
|.+.. .+....+.+|+.+.|.|.+.|.|.|.+.|+| ||..+.
T Consensus 222 p~~~~~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~ 268 (334)
T 1ry7_B 222 PILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVG 268 (334)
T ss_dssp CBCCTTCSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBC
T ss_pred CceEecCCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCcccc
Confidence 33332 2356678899999999999999999999999 555443
No 33
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.71 E-value=2.1e-16 Score=118.87 Aligned_cols=127 Identities=22% Similarity=0.379 Sum_probs=90.9
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.|.|..|...+..+.|.|.. .|+.+...+ ....+.+|+.+.|.|.+.|.|.+
T Consensus 346 i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~------------~p~~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~ 411 (642)
T 1e07_A 346 LLSVTRNDVGPYECGIQNELSVDHSDPVILNVLY------------GPDDPTISP--SYTYYRPGVNLSLSCHAASNPPA 411 (642)
T ss_pred EeccCcccCeeEEEEEeCCCCCcceeeEEEEEEc------------CCCCCeecC--CceEecCCCcEEEEEEcCccCCC
Confidence 4678899999999999999886555667776641 222222233 45677899999999999999999
Q ss_pred eEEEEeCCeeeEecccC----------------------------------C---CCCCeeeeCCceeEeecCCcEEEEe
Q psy16421 81 SIMWRREGGEMITNSFN----------------------------------N---TVPPIVKIPSQLIGAHEGQQLVLEC 123 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~----------------------------------~---~~~p~~~~~~~~~~~~~g~~~~l~C 123 (151)
.+.|++ +++.+..... + ..+|.+.. .....+.+|+.+.|.|
T Consensus 412 ~i~W~~-~g~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~~-~~~~~v~~g~~v~l~C 489 (642)
T 1e07_A 412 QYSWLI-DGNIQQHTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSISS-NNSKPVEDKDAVAFTC 489 (642)
T ss_pred eEEEEE-CCEEcCCCceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEec-CCceeecCCCeEEEEE
Confidence 999999 5655532211 0 01233322 3345678999999999
Q ss_pred eecccCCCeeEEEcCCceecc
Q psy16421 124 ISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 124 ~~~g~p~~~~~W~k~~~~~~~ 144 (151)
.+.+ |.+.+.|+|+|..+..
T Consensus 490 ~~~~-~~~~i~W~~~g~~l~~ 509 (642)
T 1e07_A 490 EPEA-QNTTYLWWVNGQSLPV 509 (642)
T ss_pred ECCC-CCcEEEEEECCEeCCC
Confidence 9995 8889999999876644
No 34
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.71 E-value=6.1e-17 Score=114.81 Aligned_cols=135 Identities=19% Similarity=0.268 Sum_probs=89.0
Q ss_pred CccccccCC-eEEEEEEEcCCCCCCc---cceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC
Q psy16421 1 MTEVSREHM-GAYLCIASNGVPPSVS---KRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG 76 (151)
Q Consensus 1 i~~v~~~d~-G~Y~C~~~~~~~~~~~---~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g 76 (151)
|.+++.+|+ |.|+|.+.|..+.... ....|.|..... ...|.+.... .....+.+|+.+.|.|.+.|
T Consensus 168 i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~--------~~~p~~~~~~-~~~~~v~~G~~v~l~C~~~g 238 (388)
T 2v5m_A 168 IREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPIS--------SSAPRTPALV-QKPLELMVAHTISLLCPAQG 238 (388)
T ss_dssp ESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCS--------CEEEECCSSC-CCCEEEETTSCEEECCCCEE
T ss_pred EecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCc--------CCCCcCcccc-CCceEEeeCCcEEEEEECCC
Confidence 467899999 9999999998643221 112344431000 0011111111 13456788999999999999
Q ss_pred CCCCeEEEEeCCee-----eEecccC---------------------------------------CCCCCeeeeCCceeE
Q psy16421 77 SPPPSIMWRREGGE-----MITNSFN---------------------------------------NTVPPIVKIPSQLIG 112 (151)
Q Consensus 77 ~~~~~~~W~~~~~~-----~~~~~~~---------------------------------------~~~~p~~~~~~~~~~ 112 (151)
.|.+.+.|++++.. .+....+ +..+|.+...+....
T Consensus 239 ~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~ 318 (388)
T 2v5m_A 239 FPAPSFRWYKFIEGTTRKQAVVLNDRVKQVSGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQT 318 (388)
T ss_dssp ESCCEEEEEEECTTSSCEEECCCSSSEEEETTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEE
T ss_pred CCCCEEEEEecCCCCcccccccccCceecccCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEE
Confidence 99999999984211 1100000 234555666667778
Q ss_pred eecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 113 AHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 113 ~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+.+|+.+.|.|.+.|.|.|.+.|+|+|..+..
T Consensus 319 v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~ 350 (388)
T 2v5m_A 319 VDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGH 350 (388)
T ss_dssp ECTTSCEEEEEEEEEECCCEEEEEETTEECSC
T ss_pred ecCCCCEEEEEEeccccCCeEEEEECCEECcc
Confidence 89999999999999999999999999876643
No 35
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.71 E-value=2.9e-17 Score=112.34 Aligned_cols=127 Identities=14% Similarity=0.228 Sum_probs=81.5
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCc---eEeecCCeEEEEeeecCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSD---IMVREGSNVSMRCAASGS 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~---~~~~~g~~~~l~C~~~g~ 77 (151)
|.+++.+|+|.|+|.|.|..|........+.|.. ..+........ .. +.+.+|+.+.|.|.+. .
T Consensus 55 i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v-----------~~p~~~~~~~~-~~~~~~~v~~G~~v~l~C~~~-~ 121 (289)
T 3mjg_X 55 LTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFV-----------PDPTVGFLPND-AEELFIFLTEITEITIPCRVT-D 121 (289)
T ss_dssp ECSCCGGGCEEEEEECCC------CCCEEEEEEC-----------CCTTCCBCCCC-HHHHEEEESSCCCEEECCCBS-C
T ss_pred EccCChhhCEEEEEEEcccCCCCcCcEEeEEEEE-----------ECCCcCcccCC-CCcceEEeecCCeEEEEeEcC-C
Confidence 5688999999999999998874333444444431 11111111110 11 5678899999999998 6
Q ss_pred CCCeEEEEeCC-eeeEecc-----------c-C---------------------CC--CCCeeeeCCceeEeecCCcEEE
Q psy16421 78 PPPSIMWRREG-GEMITNS-----------F-N---------------------NT--VPPIVKIPSQLIGAHEGQQLVL 121 (151)
Q Consensus 78 ~~~~~~W~~~~-~~~~~~~-----------~-~---------------------~~--~~p~~~~~~~~~~~~~g~~~~l 121 (151)
|.+.+.|++.+ +..+... + + +. .+|.+...+....+.+|+++.|
T Consensus 122 p~~~v~w~~~~~~~~~~~~~~~~~~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L 201 (289)
T 3mjg_X 122 PQLVVTLHEKKGDVALPVPYDHQRGFSGIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITL 201 (289)
T ss_dssp TTSCEEEEESSCCSCCCCCEETTTEEEECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEE
T ss_pred CCceEEEEeCCCCCccceeecCCcCeeeeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEE
Confidence 78889998743 3332210 0 0 11 2555555555567899999999
Q ss_pred EeeecccCCCeeEEEcCCc
Q psy16421 122 ECISEAYPKSVNYWTREKG 140 (151)
Q Consensus 122 ~C~~~g~p~~~~~W~k~~~ 140 (151)
.|.+.|.|.|.+.|++++.
T Consensus 202 ~C~~~g~p~p~v~W~~~~~ 220 (289)
T 3mjg_X 202 MCIVIGNEVVNFEWTYPRK 220 (289)
T ss_dssp EEEEESCSSBEEEEECTTS
T ss_pred EEEECCCCCcceEEEcCCc
Confidence 9999999999999998754
No 36
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.70 E-value=2e-16 Score=121.84 Aligned_cols=128 Identities=24% Similarity=0.450 Sum_probs=94.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..+ .....+.+.|. ....+|.+...+ ....+.+|+.+.|.|.+.|.|.+
T Consensus 393 i~~v~~~d~G~Y~C~a~n~~g-~~~~~~~l~v~----------~~~~~p~i~~~~--~~~~v~~G~~v~L~C~~~g~p~p 459 (816)
T 3dmk_A 393 IESVKKEDKGMYQCFVRNDRE-SAEASAELKLG----------GRFDPPVIRQAF--QEETMEPGPSVFLKCVAGGNPTP 459 (816)
T ss_dssp ESSCCGGGCEEEEEEEECSSC-EEEECCEEECC----------CSSCCCEEEEEC--CCEEECSSSCEEEEEEEECSSCC
T ss_pred EcCCCHHHCEEEEEEEECCCC-cEEEEEEEEEc----------cccCCCceEecC--cceEEcCCCCEEEEEEEecCCCC
Confidence 568899999999999999877 44444555442 113567776655 45778899999999999999999
Q ss_pred eEEEEeCCeeeEecccC------------------------------------------------CCCCCeeeeCCceeE
Q psy16421 81 SIMWRREGGEMITNSFN------------------------------------------------NTVPPIVKIPSQLIG 112 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~------------------------------------------------~~~~p~~~~~~~~~~ 112 (151)
.+.|++ ++..+..... +..+|.+. ......
T Consensus 460 ~v~W~~-~g~~l~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~-~~~~~~ 537 (816)
T 3dmk_A 460 EISWEL-DGKKIANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYGLPYIR-QMEKKA 537 (816)
T ss_dssp EEEEEE-TTEECCSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECSSCEEC-CCCCEE
T ss_pred EEEEEE-CCEECCCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEecCCeeE-ccCCeE
Confidence 999999 4554322110 22344333 334456
Q ss_pred eecCCcEEEEeeecccCCCeeEEEcCCceec
Q psy16421 113 AHEGQQLVLECISEAYPKSVNYWTREKGDMI 143 (151)
Q Consensus 113 ~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~ 143 (151)
+.+|+.+.|.|.+.|.|.+.+.|+|+|..+.
T Consensus 538 v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~ 568 (816)
T 3dmk_A 538 IVAGETLIVTCPVAGYPIDSIVWERDNRALP 568 (816)
T ss_dssp EETTCCEEEECCEECSSEEEEEEEETTEESC
T ss_pred EecCCeEEEEEEecCCCCCEEEEEECCeEcc
Confidence 8899999999999999999999999977654
No 37
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.69 E-value=1.7e-16 Score=116.86 Aligned_cols=122 Identities=17% Similarity=0.362 Sum_probs=91.9
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.| | . +..+.|.| ..+|.+...+ ....+.+|+.+.|.|.+.+.+.+
T Consensus 84 I~~~~~~D~G~Y~C~a~n--g-~-~~~~~l~V-------------~~p~~~~~~~--~~~~v~~G~~v~l~C~~~~~~~~ 144 (524)
T 2ec8_A 84 TEKAEATNTGKYTCTNKH--G-L-SNSIYVFV-------------RDPAKLFLVD--RSLYGKEDNDTLVRCPLTDPEVT 144 (524)
T ss_dssp ESSCCSTTCEEEEEEETT--S-C-EEEEEEEC-------------CCSSCSBCCC--CCCCEETTSCEEECCCBSCCCCS
T ss_pred EcccchhhCEEEEEeecC--C-c-ceEEEEEE-------------CCCCcccccc--cceEEEcCCeEEEECcCCCCccc
Confidence 568899999999999998 4 2 44455444 3445444333 56778899999999999987679
Q ss_pred eEEEEeCCeeeEecccC------------------------------------------C----CCCCeeeeCCceeEee
Q psy16421 81 SIMWRREGGEMITNSFN------------------------------------------N----TVPPIVKIPSQLIGAH 114 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~------------------------------------------~----~~~p~~~~~~~~~~~~ 114 (151)
.+.|++.+++.+....+ + ..+|.|...+....+.
T Consensus 145 ~v~W~~~~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~ 224 (524)
T 2ec8_A 145 NYSLKGCQGKPLPKDLRFIPDPKAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLR 224 (524)
T ss_dssp CEEEECSSSCCCCSSCEEEEETTTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEE
T ss_pred eEEEEccCCcCcCCCCceeECCCccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEE
Confidence 99999855555432110 1 2567777777777899
Q ss_pred cCCcEEEEeeecccCCCe-eEEEcCCce
Q psy16421 115 EGQQLVLECISEAYPKSV-NYWTREKGD 141 (151)
Q Consensus 115 ~g~~~~l~C~~~g~p~~~-~~W~k~~~~ 141 (151)
+|+++.|.|.+.|.|.|. +.|+|++..
T Consensus 225 ~G~~v~L~C~~~g~p~p~~i~W~~~~~~ 252 (524)
T 2ec8_A 225 EGEEFTVTCTIKDVSSSVYSTWKRENSQ 252 (524)
T ss_dssp TTSCEEEEEEEEESSTTCEEEEEETTCS
T ss_pred cCCcEEEEEEEecCCCcEEEEEEeCCCC
Confidence 999999999999999887 999998776
No 38
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.69 E-value=3.2e-18 Score=118.22 Aligned_cols=38 Identities=18% Similarity=0.412 Sum_probs=33.0
Q ss_pred CceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 108 SQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 108 ~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
+....+.+|+.+.|.|.+.|.|.|.+.|+|+|..+..+
T Consensus 229 ~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~ 266 (317)
T 2y25_A 229 PDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASD 266 (317)
T ss_dssp CSEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCC
T ss_pred CccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCC
Confidence 45678899999999999999999999999998777543
No 39
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.69 E-value=1.2e-15 Score=102.65 Aligned_cols=122 Identities=18% Similarity=0.217 Sum_probs=85.8
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeee-cCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA-SGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~~~ 79 (151)
|.+++.+|+|.|+|.+.|..+ +..+.|.|. .++.... + ....+.+|+.+.|.|.+ .+.|.
T Consensus 52 i~~~~~~d~G~Y~C~~~~~~~---s~~~~l~v~-------------~~~~~~~-~--~~~~~~~g~~v~l~C~~~~~~p~ 112 (262)
T 3rjd_A 52 ITSASVNDSGEYRCQRGLSGR---SDPIQLEIH-------------RGWLLLQ-V--SSRVFTEGEPLALRCHAWKDKLV 112 (262)
T ss_dssp ESSCCGGGCEEEEEEESSSCC---CCCEEEEEE-------------CSSEEEE-E--SCSEEETTSCEEEEEEEGGGCCC
T ss_pred EecCCcccCeEEEEEEecCCc---cccEEEEEe-------------ccceEec-C--CCeEEecCCeEEEEEEccCCCCC
Confidence 568899999999999988654 345666654 3333332 2 34567889999999998 77888
Q ss_pred CeEEEEeCCeeeEecccC-----------------------------------C---CCCCeeeeCCceeEeecCCcEEE
Q psy16421 80 PSIMWRREGGEMITNSFN-----------------------------------N---TVPPIVKIPSQLIGAHEGQQLVL 121 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~-----------------------------------~---~~~p~~~~~~~~~~~~~g~~~~l 121 (151)
+.+.|++ ++..+..... + ..+|.+...+ ...+.+|+.+.|
T Consensus 113 ~~v~W~~-~g~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~-~~~~~~g~~~~l 190 (262)
T 3rjd_A 113 YNVLYYR-NGKAFKFFHWNSNLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASV-TSPLLEGNLVTL 190 (262)
T ss_dssp EEEEEEE-TTEEEEEEEECCCEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESS-CSSEETTCCEEE
T ss_pred ceEEEEE-CCccccccCCCCeEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecC-ceeecCCCeEEE
Confidence 9999999 5555543210 1 1244555444 456889999999
Q ss_pred EeeecccCC-Ce----eEEEcCCceec
Q psy16421 122 ECISEAYPK-SV----NYWTREKGDMI 143 (151)
Q Consensus 122 ~C~~~g~p~-~~----~~W~k~~~~~~ 143 (151)
.|.+.+.|. |. +.|++++..+.
T Consensus 191 ~C~~~~~p~~p~~~~~~~w~~~~~~~~ 217 (262)
T 3rjd_A 191 SCETKLLLQRPGLQLYFSFYMGSKTLR 217 (262)
T ss_dssp EEECCCCCC-----EEEEEEETTEEEE
T ss_pred EeEcccCCCCCCccEEEEEEeCCcEec
Confidence 999999876 43 78999877654
No 40
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.68 E-value=1.1e-17 Score=116.81 Aligned_cols=127 Identities=18% Similarity=0.313 Sum_probs=90.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEee-----ec
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCA-----AS 75 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~-----~~ 75 (151)
|.+++.+|+|.|+|.+.|..+ .....+.|.|. .++............+.+|+.+.|.|. +.
T Consensus 85 i~~v~~~D~G~Y~C~~~n~~g-~~~~~~~l~V~-------------~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~ 150 (339)
T 3o4o_C 85 LLPALQEDSGTYVCTTRNASY-CDKMSIELRVF-------------ENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTR 150 (339)
T ss_dssp ESSBCTTCCEEEECCEEETTE-EEEEEEEEEEE-------------CSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCC
T ss_pred ECCCCcccCEEEEEEEECCcc-eEEEEEEEEEE-------------cCCCccccccccceEEECCCCEEEEecCCccccc
Confidence 568899999999999999877 45556666664 222111000002346778999999999 78
Q ss_pred CCCCCeEEEEeCCeeeEecccC----------------------------------------------C-----CCCCee
Q psy16421 76 GSPPPSIMWRREGGEMITNSFN----------------------------------------------N-----TVPPIV 104 (151)
Q Consensus 76 g~~~~~~~W~~~~~~~~~~~~~----------------------------------------------~-----~~~p~~ 104 (151)
+.|.+.+.|++ ++..+..... + ..+|.+
T Consensus 151 g~p~~~v~W~k-~g~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i 229 (339)
T 3o4o_C 151 DKTDVKIQWYK-DSLLLDKDNEKFLSVRGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVI 229 (339)
T ss_dssp SSSCCCBCCEE-SSCBCCTTCSSEEECTTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEE
T ss_pred CCCCceEEEec-CCeeCCCCCceeEEcCCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEE
Confidence 89999999999 5555443210 0 124555
Q ss_pred eeCCceeEeecCCcEEEEeee---cccC-CCeeEEEcCCcee
Q psy16421 105 KIPSQLIGAHEGQQLVLECIS---EAYP-KSVNYWTREKGDM 142 (151)
Q Consensus 105 ~~~~~~~~~~~g~~~~l~C~~---~g~p-~~~~~W~k~~~~~ 142 (151)
...+....+.+|+++.|.|.+ .|.| .+.+.|+++|..+
T Consensus 230 ~~~~~~~~v~~G~~v~L~C~~~~~~g~P~~~~v~W~~~g~~~ 271 (339)
T 3o4o_C 230 ISPLKTISASLGSRLTIPCKVFLGTGTPLTTMLWWTANDTHI 271 (339)
T ss_dssp CCCSCCCCCCCCSCCCCCCCEEESSSCCSSCEEEEESSSSCS
T ss_pred ecCCceeEeccCCCEEEEEEEECCCCCCCCceEEEEECCeec
Confidence 555666678899999999999 8999 8889999987654
No 41
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.68 E-value=5e-17 Score=111.13 Aligned_cols=125 Identities=15% Similarity=0.244 Sum_probs=87.5
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCe-eEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPD-ILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++.+|+|.|+|.+.|..+ ..+..+.|.|. .+|. +...+ ....+.+|+.+.|.|.+.+ +.
T Consensus 55 i~~~~~~d~G~Y~C~~~n~~~-~~~~~~~l~V~-------------~~~~~~~~~~--~~~~v~~g~~v~l~C~~~~-~~ 117 (292)
T 4dkd_C 55 TNNATFQNTGTYRCTEPGDPL-GGSAAIHLYVK-------------DPARPWNVLA--QEVVVFEDQDALLPCLLTD-PV 117 (292)
T ss_dssp ESSCCGGGCSCEEECCCC-----CCEEECCEEC-------------CSSCCEEESC--SEEEEETTSCEECCEEESS-GG
T ss_pred EcccccccCEEEEEEEccCCC-CcceEEEEEEc-------------CccccccccC--CeEEEcCCCcEEEeeeCCC-CC
Confidence 568899999999999999877 34555565553 3443 33333 4678889999999999987 54
Q ss_pred --CeEEEEeCCeeeEecccC-----------------------------------------CC----CCCeeeeCCceeE
Q psy16421 80 --PSIMWRREGGEMITNSFN-----------------------------------------NT----VPPIVKIPSQLIG 112 (151)
Q Consensus 80 --~~~~W~~~~~~~~~~~~~-----------------------------------------~~----~~p~~~~~~~~~~ 112 (151)
+.+.|+++++..+..... +. .+|.+...+....
T Consensus 118 ~~~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~ 197 (292)
T 4dkd_C 118 LEAGVSLVRVRGRPLMRHTNYSFSPWHGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELV 197 (292)
T ss_dssp GGSSEEEEEGGGCCCCSSCCEECCSSSCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBC
T ss_pred cceeEEEEecCCCccccCCcccccCCceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCcee
Confidence 789999965554432211 11 2677776666666
Q ss_pred eecCCcEEEEeeecccCC-CeeEEEcCCcee
Q psy16421 113 AHEGQQLVLECISEAYPK-SVNYWTREKGDM 142 (151)
Q Consensus 113 ~~~g~~~~l~C~~~g~p~-~~~~W~k~~~~~ 142 (151)
+.+|+.+.|.|.+.+.|+ +.+.|++++..+
T Consensus 198 ~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~ 228 (292)
T 4dkd_C 198 RIRGEAAQIVCSASSVDVNFDVFLQHNNTKL 228 (292)
T ss_dssp CCSSSCEEEEEEEEESSSCCEEECCBSSCCC
T ss_pred EecCCCEEEEEEecCCCCceEEEEeCCCccc
Confidence 789999999999998776 458999987644
No 42
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.67 E-value=5.6e-16 Score=114.04 Aligned_cols=125 Identities=14% Similarity=0.169 Sum_probs=78.6
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCee-EeCCCCCce-EeecCCeEEEEeeecCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDI-LDYPTSSDI-MVREGSNVSMRCAASGSP 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~-~~~~~~~~~-~~~~g~~~~l~C~~~g~~ 78 (151)
|.+++.+| |.|+|.|.|..|. ......|.+ ...|.+ ...+ ... .+.+|+.+.|.|.+.|.+
T Consensus 285 i~~~~~~d-G~Y~C~a~n~~g~-~~~~~~l~v-------------~~~P~~~~~~p--~~~~~v~~g~~~~l~C~~~g~~ 347 (523)
T 2rcj_C 285 VPSSSLGT-QTYICNVNHKPSN-TKVDKRVEP-------------LSLPSVFLFPP--KPKDTLMISRTPEVTCVVVDVS 347 (523)
T ss_pred echhhcCC-ceEEEEEEeCCCC-cceEEecCC-------------CcCceEEecCC--CchhhcccCCceEEEEEEeccc
Confidence 45678889 9999999999884 333333332 233443 3333 222 367899999999998865
Q ss_pred C----CeEEEEeCCeeeEeccc----------------------------C------------------------CCCCC
Q psy16421 79 P----PSIMWRREGGEMITNSF----------------------------N------------------------NTVPP 102 (151)
Q Consensus 79 ~----~~~~W~~~~~~~~~~~~----------------------------~------------------------~~~~p 102 (151)
+ +.+.|++ +++.+.... + ...+|
T Consensus 348 p~~~~~~v~W~k-~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P 426 (523)
T 2rcj_C 348 HEDPQVKFNWYV-DGVQVHNAKTKPREQQYNSTYRVVSVLTVLHQNWLDGKEYKCKVSNKALPAPIEKTISKAKGQPREP 426 (523)
T ss_pred CCCCceEEEEEE-CCeEccCCccCCceecCCCcEEEEEEEEECHHHhcCCCeEEEEEeCCCCCCceeEEEEcccCCCCCC
Confidence 3 5899999 555442110 0 01234
Q ss_pred eeeeCCceeEeecCCcEEEEeeecccCCC--eeEEEcCCceec
Q psy16421 103 IVKIPSQLIGAHEGQQLVLECISEAYPKS--VNYWTREKGDMI 143 (151)
Q Consensus 103 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~~--~~~W~k~~~~~~ 143 (151)
.+...+.......|..+.|.|.+.|.|+| .+.|+|||..+.
T Consensus 427 ~v~~~~~~~~~~~~~~~~l~C~~~g~~p~~~~v~W~k~g~~~~ 469 (523)
T 2rcj_C 427 QVYTLPPSREEMTKNQVSLTCLVKGFYPSDIAVEWESNGQPEN 469 (523)
T ss_pred EEEEeCCChHHccCCceEEEEEEEeeECCCCEEEEEECCEECC
Confidence 43332222112335559999999997766 799999987664
No 43
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.67 E-value=6.2e-16 Score=111.31 Aligned_cols=125 Identities=18% Similarity=0.348 Sum_probs=84.7
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~~ 79 (151)
|.+++.+|+|.|+|.|.|..+......+.|.|. ....+|.+...+ ......+|+.+.|.|.+.+ .|.
T Consensus 79 I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~----------~~~~~P~v~~~~--~~~~~~~g~~~~l~C~~~g~~p~ 146 (438)
T 1qgc_4 79 IDPVEADDVATYYCQQSNEVPLTFGAGTKLDLK----------RADAAPTVSIFP--PSSEQLTSGGASVVCFLNNFYPK 146 (438)
T ss_dssp ESSCCGGGCEEEEEEECSSTTCCBCCCEEEEEC----------CCCBCCEEEEEC--CCHHHHHTTEEEEEEEEEEEBSS
T ss_pred eCCCcCcCCeeEEEEEecCCCccccCceeEEec----------CCCCCCEEEecC--CChhhccCCceEEEEEEccccCC
Confidence 578999999999999999876434455666663 112356665433 1223346889999999877 677
Q ss_pred C-eEEEEeCCeeeEecc----------c-C---------------------------C------------CCCCeeeeCC
Q psy16421 80 P-SIMWRREGGEMITNS----------F-N---------------------------N------------TVPPIVKIPS 108 (151)
Q Consensus 80 ~-~~~W~~~~~~~~~~~----------~-~---------------------------~------------~~~p~~~~~~ 108 (151)
+ .+.|++ +++.+... . . . ..++.....+
T Consensus 147 ~~~v~W~k-~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~ 225 (438)
T 1qgc_4 147 DINVKWKI-DGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECEVMLVES 225 (438)
T ss_dssp CEEEEEEE-TTEEECTTEEEEEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC-CCEEEEE
T ss_pred CcEEEEEE-CCEEcCCCceeccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccccceeEEecC
Confidence 7 899999 56554332 0 0 0 0011122223
Q ss_pred ceeEeecCCcEEEEeeecccC--CCeeEEEcC
Q psy16421 109 QLIGAHEGQQLVLECISEAYP--KSVNYWTRE 138 (151)
Q Consensus 109 ~~~~~~~g~~~~l~C~~~g~p--~~~~~W~k~ 138 (151)
....+.+|+++.|.|.+.|.| .+.+.|+|+
T Consensus 226 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 257 (438)
T 1qgc_4 226 GGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQ 257 (438)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred CceEEecCCcEEEEEEEcccccCCcEEEEEEC
Confidence 456688999999999999988 678999986
No 44
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.65 E-value=1.3e-16 Score=113.22 Aligned_cols=127 Identities=17% Similarity=0.264 Sum_probs=86.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeee-cCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA-SGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~~~ 79 (151)
|.+++.+|+|.|+|.+.|..|...+..+.|.|.. ...|.+.. ....+.+|+.+.|.|.+ .+.|.
T Consensus 66 i~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~~-----------~~~p~~~~----~~~~~~~G~~v~l~C~~~~~~p~ 130 (395)
T 1bih_A 66 FLRPQASDEGHYQCFAETPAGVASSRVISFRKTY-----------LIASPAKT----HEKTPIEGRPFQLDCVLPNAYPK 130 (395)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEECCCEEEEEEE-----------EECCCCEE----EEECCBTTEEEEECCCCCEEESC
T ss_pred EecCCCCCCcEEEEEEEeCCCeEEeEEEEEEEEE-----------eecCCcCC----cceeeeeCCcEEEEecCCCCCCC
Confidence 5678999999999999998875444556665531 11232221 34567789999999995 78899
Q ss_pred CeEEEEeCC--eeeE----------e-ccc-----------------C------CC------------------------
Q psy16421 80 PSIMWRREG--GEMI----------T-NSF-----------------N------NT------------------------ 99 (151)
Q Consensus 80 ~~~~W~~~~--~~~~----------~-~~~-----------------~------~~------------------------ 99 (151)
+.+.|++++ ..+. . ... . +.
T Consensus 131 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (395)
T 1bih_A 131 PLITWKKRLSGADPNADVTDFDRRITAGPDGNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYK 210 (395)
T ss_dssp CEEEEEEEETTSCGGGCCCCCCTTEEECTTSCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCC
T ss_pred CeEEEEecCCCcCcccccccccccEEEcCCCcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEeccccccccccc
Confidence 999999943 0110 0 000 0 00
Q ss_pred --CCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 100 --VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 100 --~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
.+|.+ .+....+.+|+.+.|.|.+.|.|.|.+.|+|+|..+..
T Consensus 211 ~~~~p~~--~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~ 255 (395)
T 1bih_A 211 GEPVPQY--VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNG 255 (395)
T ss_dssp CCCEEEE--ECCSEEEETTSCEEEEEEEECSSCCCCEEEETTEECCC
T ss_pred CCcCcee--cCCceEEECCCcEEEEEEeccCCCCeEEEEECCEEcCC
Confidence 01111 13456788999999999999999999999999876654
No 45
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.65 E-value=3.7e-15 Score=103.27 Aligned_cols=126 Identities=22% Similarity=0.362 Sum_probs=82.9
Q ss_pred CccccccCCeEEEEEEEcCCCC----CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP----SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~----~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g 76 (151)
|.+++.+|+|.|+|.|.|..+. ..+..+.|.|. ....+|.+...+ . ..+.+|+++.|.|.+.+
T Consensus 78 I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~----------~~~~~p~~~~~~--~-~~v~~G~~v~L~C~~~~ 144 (316)
T 3vh8_G 78 MSPVTTAHAGNYTCRGSHPHSPTGWSAPSNPVVIMVT----------GNHRKPSLLAHP--G-PLVKSGERVILQCWSDI 144 (316)
T ss_dssp ECSCCGGGCEEEEEEEBCSSSSSSBCCCCCCEEEEEE----------CSSCCCEEEEES--C-SEEETTCCEEEEEEESS
T ss_pred ECCCCcccCeEEEEEEEcCCCCcceecCCCcEEEEEe----------cCCCCCeEEecC--C-CccCCCCeEEEEEcCCC
Confidence 5689999999999999874321 34455666663 112456666554 2 34789999999999965
Q ss_pred CCCCeEEEEeCCeeeEecc----------cC---------------------C---------------------CCCCee
Q psy16421 77 SPPPSIMWRREGGEMITNS----------FN---------------------N---------------------TVPPIV 104 (151)
Q Consensus 77 ~~~~~~~W~~~~~~~~~~~----------~~---------------------~---------------------~~~p~~ 104 (151)
+.+.+.|++++ ..+... .. + ..+|.+
T Consensus 145 -~~~~~~w~k~g-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i 222 (316)
T 3vh8_G 145 -MFEHFFLHKEG-ISKDPSRLVGQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSL 222 (316)
T ss_dssp -CCSEEEEEETT-CCSCCEEEECEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEE
T ss_pred -CCcEEEEEECC-CccccceeeeeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeE
Confidence 56789999944 332100 00 0 112333
Q ss_pred eeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceec
Q psy16421 105 KIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMI 143 (151)
Q Consensus 105 ~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~ 143 (151)
...+. ..+.+|+++.|.|.+.+ |.+.+.|+|+|..+.
T Consensus 223 ~~~~~-~~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~~ 259 (316)
T 3vh8_G 223 SAQPG-PKVQAGESVTLSCSSRS-SYDMYHLSREGGAHE 259 (316)
T ss_dssp EEESC-SCCCTTSCCEEEEEESS-CCSEEEEEETTSSCC
T ss_pred EeCCC-CeecCCCcEEEEEECCC-CCcEEEEEECCCcCC
Confidence 33322 24678999999999974 778999999986543
No 46
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.64 E-value=3.8e-15 Score=110.81 Aligned_cols=128 Identities=22% Similarity=0.329 Sum_probs=89.5
Q ss_pred CccccccCCeEEEEEEEcCCCCCCc----cceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVS----KRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~----~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g 76 (151)
|.+++.+|+|.|+|.|.|..+ ... ..+.|.|. .+|.+...+ ....+.+|+.+.|.|.+.+
T Consensus 294 i~~v~~~d~G~Y~C~a~n~g~-~~~~~~~~~~~l~V~-------------~~p~~~~~~--~~~~~~~G~~v~l~C~~~~ 357 (585)
T 2ocw_A 294 ITGLRKEDAGRYLCGAHSDGQ-LQEGSPIQAWQLFVN-------------EESTIPRSP--TVVKGVAGSSVAVLCPYNR 357 (585)
T ss_pred EccCChhhCEEEEEEEEcCCC-ccccCceeeEEEEEe-------------cccccccCC--cceEEEeCCcEEEEEecCC
Confidence 467889999999999999633 321 44555553 566665554 5678889999999999999
Q ss_pred CCCCeE----EEEe--CCe--eeE---------------------------ecccC------------------------
Q psy16421 77 SPPPSI----MWRR--EGG--EMI---------------------------TNSFN------------------------ 97 (151)
Q Consensus 77 ~~~~~~----~W~~--~~~--~~~---------------------------~~~~~------------------------ 97 (151)
.|.+.+ .|++ ++. ... ....-
T Consensus 358 ~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~an~~g~~~~~~~l 437 (585)
T 2ocw_A 358 KESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLTNGDTLWRTTVEI 437 (585)
T ss_pred CCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcccCCCccceeEEE
Confidence 998877 7988 432 111 00000
Q ss_pred -C-CCCCeeeeCCceeEeecCCcEEEEeeec----ccCCCeeEEEcCCceeccC
Q psy16421 98 -N-TVPPIVKIPSQLIGAHEGQQLVLECISE----AYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 98 -~-~~~p~~~~~~~~~~~~~g~~~~l~C~~~----g~p~~~~~W~k~~~~~~~~ 145 (151)
+ ..+|.+.. +....+.+|+.+.|.|.+. |.|.|.+.|+|+|..+...
T Consensus 438 ~V~~~~p~~~~-~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~~ 490 (585)
T 2ocw_A 438 KIIEGEPNLKV-PGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALPS 490 (585)
T ss_pred EEecCcccccc-CCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeeec
Confidence 1 11233332 4566789999999999997 7788899999998776543
No 47
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.64 E-value=4.2e-15 Score=107.44 Aligned_cols=124 Identities=17% Similarity=0.266 Sum_probs=85.5
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeE-eCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDIL-DYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++. |+| |+|.+.+..+ ..+..+.|.|. .+|.+. ..+ ....+.+|+.+.|.|.+.+.++
T Consensus 54 i~~v~~-d~g-Y~C~a~~~~~-~~~~~~~l~V~-------------~~P~~~~~~~--~~~~v~~G~~v~L~C~~~g~~~ 115 (450)
T 1z7z_I 54 LSNVQE-DSQ-PMCYSNCPDG-QSTAKTFLTVY-------------WTPERVELAP--LPSWQPVGKNLTLRCQVEGGAP 115 (450)
T ss_dssp EEEECS-CBC-CEEEEEETTE-EEEEECEEEEE-------------BCCSEEEECC--CCSEECTTSEEEEEEEEECCBC
T ss_pred EEeccc-CCe-eEEEEeCCCC-cceeEEEEEEE-------------eCCCcceecC--CCceEeeCCeEEEEEEecCCCC
Confidence 456766 999 9999976544 45556666664 345444 444 4567889999999999999888
Q ss_pred C---eEEEEeCCeeeEecccC---------------------------CC-------------CCCeeee------CCce
Q psy16421 80 P---SIMWRREGGEMITNSFN---------------------------NT-------------VPPIVKI------PSQL 110 (151)
Q Consensus 80 ~---~~~W~~~~~~~~~~~~~---------------------------~~-------------~~p~~~~------~~~~ 110 (151)
+ .+.|++ +++.+..... +. .+..+.+ .+..
T Consensus 116 ~~~~~v~W~k-~g~~l~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~ 194 (450)
T 1z7z_I 116 RANLTVVLLR-GEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQL 194 (450)
T ss_dssp GGGEEEEEEE-TTEEEEEEECCTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEE
T ss_pred CcCcEEEEee-CCEEeecccccccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEe
Confidence 7 899999 5665543210 00 1111111 1222
Q ss_pred ---eEeecCCcEEEEeeeccc-C--CCeeEEEcCCceec
Q psy16421 111 ---IGAHEGQQLVLECISEAY-P--KSVNYWTREKGDMI 143 (151)
Q Consensus 111 ---~~~~~g~~~~l~C~~~g~-p--~~~~~W~k~~~~~~ 143 (151)
..+.+|+.+.|.|.+.|. | .+.++|+++|..+.
T Consensus 195 ~~~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~~~ 233 (450)
T 1z7z_I 195 VSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLN 233 (450)
T ss_dssp ECCSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEECC
T ss_pred cCceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEeCC
Confidence 568899999999999998 7 68899999976553
No 48
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.64 E-value=9.6e-16 Score=109.03 Aligned_cols=123 Identities=23% Similarity=0.364 Sum_probs=81.7
Q ss_pred cccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeec-CCCCCeEE
Q psy16421 5 SREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAAS-GSPPPSIM 83 (151)
Q Consensus 5 ~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-g~~~~~~~ 83 (151)
+.+|+|.|+|.|.|..|...+..+.+.+.. .+.+.... .....+.+|+.+.|.|.+. +.+.+.+.
T Consensus 71 ~~~D~G~Y~C~A~N~~G~~~s~~~~l~v~~-------------~~~~~~~~-~~~~~v~~G~~~~l~C~~~~~~~~~~~~ 136 (384)
T 3kld_A 71 KTQDAGTYQCIATNSFGTIVSREAKLQFAY-------------LENFKTRT-RSTVSVRRGQGMVLLCGPPPHSGELSYA 136 (384)
T ss_dssp HHHHCEEEEEEEEETTEEEECCCEEEEEEE-------------ECCCSCCC-CCCEEEEETCCEEECCCCCSEESCEEEE
T ss_pred CcccCEEEEEEEEcCcccEEecceEEEEec-------------ccccccCC-CCceeEEcCCCeEEecCCCCCCCCeEEE
Confidence 678999999999999885555566666531 11121111 1456788999999999754 45678999
Q ss_pred EEeCCeeeEecccC----------------------------C-------CC----------------CCeeee-CCcee
Q psy16421 84 WRREGGEMITNSFN----------------------------N-------TV----------------PPIVKI-PSQLI 111 (151)
Q Consensus 84 W~~~~~~~~~~~~~----------------------------~-------~~----------------~p~~~~-~~~~~ 111 (151)
|++ ++.++....+ + .. +|.+.. .+...
T Consensus 137 W~~-~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~ 215 (384)
T 3kld_A 137 WIF-NEYPSYQDNRRFVSQETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETV 215 (384)
T ss_dssp EEE-TTEECCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEE
T ss_pred EEE-CCCCCEeeccEEEEcCCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCce
Confidence 998 4443321110 0 00 111211 24456
Q ss_pred EeecCCcEEEEeeecccCCCeeEEEcCCcee
Q psy16421 112 GAHEGQQLVLECISEAYPKSVNYWTREKGDM 142 (151)
Q Consensus 112 ~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~ 142 (151)
.+.+|+++.|.|.+.|.|.|.+.|+|+++..
T Consensus 216 ~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~ 246 (384)
T 3kld_A 216 PAEKGTTVKLECFALGNPVPTILWRRADGKP 246 (384)
T ss_dssp EEETTSCEEEEEEEEEESCCEEEEEETTCCC
T ss_pred EecCCCcEEEEEEEeecCCCcEEEEeCCCcc
Confidence 6789999999999999999999999965533
No 49
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.64 E-value=7.9e-16 Score=108.55 Aligned_cols=120 Identities=16% Similarity=0.286 Sum_probs=81.2
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|.. ..+.|.|.. +...+ ...+.+|+++.|.|.+.+.|.+
T Consensus 71 I~~v~~~D~G~Y~C~~~n~~-----~~~~l~V~~----------------~~~~~---~~~v~~G~~v~l~C~~~~~p~~ 126 (363)
T 1wio_A 71 IKNLKIEDSDTYICEVEDQK-----EEVQLLVFG----------------LTANS---DTHLLQGQSLTLTLESPPGSSP 126 (363)
T ss_dssp ECSCCGGGCEEEEEEETTEE-----EEEEEEEEE----------------EEESS---CSSEESBSCEEEEEECCTTCCC
T ss_pred ECCCCHHHCEEEEEEEEECC-----CcEEEEEEe----------------CCCCC---ceEEecCCCEEEEEEcCCCCCC
Confidence 56889999999999998863 245555531 11222 2356789999999999889999
Q ss_pred eEEEEeCCeeeEecccC--------------------C----CCCCeeee-----CCceeEeecCCcEEEEeeecc----
Q psy16421 81 SIMWRREGGEMITNSFN--------------------N----TVPPIVKI-----PSQLIGAHEGQQLVLECISEA---- 127 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~--------------------~----~~~p~~~~-----~~~~~~~~~g~~~~l~C~~~g---- 127 (151)
.+.|+++++........ . .....+.+ .+....+.+|+.+.|.|.+.|
T Consensus 127 ~v~W~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~~~~~~~~G~~v~l~C~~~~~~~~ 206 (363)
T 1wio_A 127 SVQCRSPRGKNIQGGKTLSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKASSIVYKKEGEQVEFSFPLAFTVEK 206 (363)
T ss_dssp CEEEECSSSCEEEESSEEEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCSEEEEEEETBCCEEEECCCCCCCCS
T ss_pred eEEEEcCCCcccccceEEEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCCCCceEEecCCEEEEEEEEeccccc
Confidence 99999954433221110 0 00001100 124556788999999999888
Q ss_pred -cCCCeeEEEcCCceecc
Q psy16421 128 -YPKSVNYWTREKGDMIA 144 (151)
Q Consensus 128 -~p~~~~~W~k~~~~~~~ 144 (151)
.|.|.+.|+|+|..+..
T Consensus 207 ~~P~p~i~W~~~g~~~~~ 224 (363)
T 1wio_A 207 LTGSGELWWQAERASSSK 224 (363)
T ss_dssp SCEEEEEEEEESSCCCCC
T ss_pred CCCceeEEEecCCCCccc
Confidence 88899999998766543
No 50
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.63 E-value=8.6e-16 Score=108.77 Aligned_cols=126 Identities=21% Similarity=0.293 Sum_probs=86.0
Q ss_pred ccccc-cCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeee-cCCCC
Q psy16421 2 TEVSR-EHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA-SGSPP 79 (151)
Q Consensus 2 ~~v~~-~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~~~ 79 (151)
.++.. +|+|.|+|.+.|..|...+..+.|.|. ..|.+.... .....+.+|+.+.|.|.+ .+.|.
T Consensus 66 ~~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~v~-------------~~~~~~~~~-~~~~~v~~G~~v~l~C~~~~~~p~ 131 (382)
T 1cs6_A 66 SNPVKAKDAGSYQCVATNARGTVVSREASLRFG-------------FLQEFSAEE-RDPVKITEGWGVMFTCSPPPHYPA 131 (382)
T ss_dssp ESCCHHHHCEEEEEEEEETTEEEECCCEEEEEE-------------EECCCCSSC-CCCEEEETTSCEEECCCCCSEESC
T ss_pred ecccccccCEEEEEEEEcCCcEEEecceEEEee-------------ccccccccC-CCceEEecCCcEEEEeCCCCCCCC
Confidence 45665 999999999999887544555666664 112222111 145788899999999995 55788
Q ss_pred CeEEEEeCCeeeEec---------cc-C----------------------C----------------------CCCCeee
Q psy16421 80 PSIMWRREGGEMITN---------SF-N----------------------N----------------------TVPPIVK 105 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~---------~~-~----------------------~----------------------~~~p~~~ 105 (151)
+.+.|+++ +..+.. .. . . ..+|.+.
T Consensus 132 ~~i~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~ 210 (382)
T 1cs6_A 132 LSYRWLLN-EFPNFIPADGRRFVSQTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIK 210 (382)
T ss_dssp CEEEEEES-STTCBCCCCSSEEECTTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEE
T ss_pred cEEEEEEC-CCccccccCceEEEecCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCcee
Confidence 99999994 333210 00 0 0 0023333
Q ss_pred eC-CceeEeecCCcEEEEeeecccCCCeeEEEcCCcee
Q psy16421 106 IP-SQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDM 142 (151)
Q Consensus 106 ~~-~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~ 142 (151)
.. +....+.+|+.+.|.|.+.|.|.|.+.|+|+++.+
T Consensus 211 ~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~ 248 (382)
T 1cs6_A 211 AKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQ 248 (382)
T ss_dssp ECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCC
T ss_pred ccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCccc
Confidence 32 44667889999999999999999999999987654
No 51
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.62 E-value=1.3e-15 Score=110.14 Aligned_cols=122 Identities=16% Similarity=0.140 Sum_probs=77.9
Q ss_pred cccccCCe--EEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 3 EVSREHMG--AYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 3 ~v~~~d~G--~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
+++.+|+| .|+|.+.|..+ .....+.|.|.. ..+|.+... ...+.+|+.+.|.|.+. |.|
T Consensus 250 ~v~~~d~G~~~Y~C~a~n~~g-~~~~~~~l~V~~-----------~~~p~i~~~----~~~v~~G~~v~l~C~~~--p~p 311 (450)
T 1z7z_I 250 SVTAEDEGTQRLTCAVILGNQ-SQETLQTVTIYS-----------FPAPNVILT----KPEVSEGTEVTVKCEAH--PRA 311 (450)
T ss_dssp ECCGGGCEEEEEEEEEEETTE-EEEEEEEEEEEC-----------CCCCEEEES----CSEEETTCEEEEEEEC------
T ss_pred EeEhhhCCcEEEEEEEccCCc-cEEEEEEEEEec-----------CCCCeEecC----CeeEeCCCcEEEEEecC--CCC
Confidence 46889999 99999999987 445566666541 234666543 35788999999999997 888
Q ss_pred eEEEEeCCeeeEecc-cC--------------------------------------CCCCCeeeeCC--ceeEeecCCcE
Q psy16421 81 SIMWRREGGEMITNS-FN--------------------------------------NTVPPIVKIPS--QLIGAHEGQQL 119 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~-~~--------------------------------------~~~~p~~~~~~--~~~~~~~g~~~ 119 (151)
.+.| ++..+... .. +..+|.+.... ....+.+|+++
T Consensus 312 ~i~W---~g~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~~P~~~~~~~p~~~~~~~g~~~ 388 (450)
T 1z7z_I 312 KVTL---NGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQ 388 (450)
T ss_dssp ---------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEEEEECCSTTSCSEEEEETTCEE
T ss_pred EeEE---CCEEcCCCCceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEecCCceeeccCCCceeEcCCCeE
Confidence 9999 34444111 00 11233443332 56678999999
Q ss_pred EEEeeecccCCCeeEEEcCCceeccC
Q psy16421 120 VLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 120 ~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
.|.|.+.|.|.|.+.|+|+|..++.+
T Consensus 389 ~l~C~~~g~P~p~i~W~~~g~~~~~~ 414 (450)
T 1z7z_I 389 TPMCQAWGNPLPELKCLKDGTFPLPI 414 (450)
T ss_dssp CCCCCCEEESCCEEEEEETTTEECCT
T ss_pred EEEEecccCCCCcEEEEECCcccCCC
Confidence 99999999999999999998765544
No 52
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.62 E-value=6.3e-16 Score=108.50 Aligned_cols=76 Identities=14% Similarity=0.385 Sum_probs=51.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC-CC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS-PP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-~~ 79 (151)
|.+++.+|+|.|.|.+.|..+ .......|.|.. ....+|.+...+ ....+.+|+.+.|.|.+.|. |.
T Consensus 83 I~~v~~~D~G~Y~C~~~n~~~-~~~~~~~l~V~~---------~~~~~P~i~~~~--~~~~~~~g~~v~L~C~~~g~~P~ 150 (344)
T 1za6_B 83 LSSLRSEDTAVYFCTRSLNMA-YWGQGTLVTVSS---------ASTKGPSVFPLA--PSSKSTSGGTAALGCLVKDYFPE 150 (344)
T ss_dssp ECSCCGGGCEEEEEEETTTTC-EECCCEEEEECS---------SCCBCCEEEEEC--CSCTTTSSSEEEEEEEEEEEBSS
T ss_pred ECCCCcccCEEEEEEEecCcc-eecCcEEEEEec---------CCCCCCeEEEcc--ccccccCCCcEEEEEEEeeEECC
Confidence 578999999999999998543 333455666641 111345444322 12235689999999999886 54
Q ss_pred -CeEEEEeCC
Q psy16421 80 -PSIMWRREG 88 (151)
Q Consensus 80 -~~~~W~~~~ 88 (151)
+.+.|++++
T Consensus 151 ~~~v~W~k~g 160 (344)
T 1za6_B 151 PVTVSWNSGA 160 (344)
T ss_dssp CCCEEETTTT
T ss_pred CeEEEEecCC
Confidence 799999843
No 53
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.62 E-value=1.4e-15 Score=102.97 Aligned_cols=120 Identities=17% Similarity=0.151 Sum_probs=82.6
Q ss_pred ccccCCe--EEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCe
Q psy16421 4 VSREHMG--AYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPS 81 (151)
Q Consensus 4 v~~~d~G--~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~ 81 (151)
++.+|+| .|+|.+.|..+ .....+.|.|.. ..+|.+.. ....+.+|+.+.|.|.+. |.+.
T Consensus 66 ~~~~d~g~g~Y~C~a~n~~~-~~~~~~~l~V~~-----------~p~p~~~~----~~~~v~~G~~v~l~C~~~--p~~~ 127 (265)
T 2oz4_A 66 VTAEDEGTQRLTCAVILGNQ-SQETLQTVTIYS-----------FPAPNVIL----TKPEVSEGTEVTVKCEAH--PRAK 127 (265)
T ss_dssp ECGGGCEEEEEEEEEEETTE-EEEEEEEEEEEC-----------CCCCEEEE----SCSEEETTCEEEEEEECC--TTSE
T ss_pred cccccCCcceEEEEEecCCC-CcEEEEEEEEeC-----------CCCceeec----CCceecCCCcEEEEEEcc--CCCE
Confidence 3668888 49999999987 455566666531 12345543 345688899999999998 8899
Q ss_pred EEEEeCCeeeEecccC---------------------------------------CCCCCeeeeC--CceeEeecCCcEE
Q psy16421 82 IMWRREGGEMITNSFN---------------------------------------NTVPPIVKIP--SQLIGAHEGQQLV 120 (151)
Q Consensus 82 ~~W~~~~~~~~~~~~~---------------------------------------~~~~p~~~~~--~~~~~~~~g~~~~ 120 (151)
+.| +++.+..... +..+|.+... +....+.+|+.+.
T Consensus 128 i~W---~g~~~~~~~~~~~l~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~ 204 (265)
T 2oz4_A 128 VTL---NGVPAQPLGPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQT 204 (265)
T ss_dssp EEE---SSCSSSCCSSEECCEEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEEC
T ss_pred EEE---CCEEccCCCCcEEEEEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEE
Confidence 999 3444321100 1112222222 3456788999999
Q ss_pred EEeeecccCCCeeEEEcCCceecc
Q psy16421 121 LECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 121 l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
|.|.+.|.|.|.+.|+|+|..++.
T Consensus 205 l~C~~~g~P~p~i~W~~~~~~~~~ 228 (265)
T 2oz4_A 205 PMCQAWGNPLPELKCLKDGTFPLP 228 (265)
T ss_dssp CCCCCEEESCCEEEEEETTTEECC
T ss_pred EEeECccCCCCeEEEEECCcccCC
Confidence 999999999999999999874443
No 54
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.61 E-value=4.7e-17 Score=124.32 Aligned_cols=122 Identities=22% Similarity=0.369 Sum_probs=0.0
Q ss_pred cCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEe
Q psy16421 7 EHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRR 86 (151)
Q Consensus 7 ~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~ 86 (151)
+|+|.|+|.|.|..| .....+.|.|. .+|.+...+ ...+.+|+.+.|.|.+.+.|.+.+.|++
T Consensus 523 ~d~G~Y~C~a~N~~g-~~~~~~~l~V~-------------~~p~i~~~p---~~~~~~G~~v~l~C~~~~~p~~~v~W~k 585 (772)
T 3v2a_R 523 NVSALYKCEAVNKVG-RGERVISFHVT-------------RGPEITLQP---DMQPTEQESVSLWCTADRSTFENLTWYK 585 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccCeEEEEEEEcccc-ccceeEEEEEE-------------CCceeeccC---CcccccCCceEEEEeccCCCCCCcEEEE
Confidence 689999999999988 44555565553 456665544 2356789999999999999999999999
Q ss_pred CCeeeEe--------------------------ccc-----C-----------------------------------CCC
Q psy16421 87 EGGEMIT--------------------------NSF-----N-----------------------------------NTV 100 (151)
Q Consensus 87 ~~~~~~~--------------------------~~~-----~-----------------------------------~~~ 100 (151)
++..... ... . ...
T Consensus 586 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~~ 665 (772)
T 3v2a_R 586 LGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELKNASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLERV 665 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCcccccccCcccccccccccceeeccceeeecCCCceEEEEECCCCccCCcEEEEEEEeCCCCeEEEEEEeecccccC
Confidence 4422110 000 0 124
Q ss_pred CCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 101 PPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 101 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
+|.|...+....+.+|+++.|.|.+.|.|.|.++|+|+|..+..+
T Consensus 666 ~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g~~l~~~ 710 (772)
T 3v2a_R 666 APTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVED 710 (772)
T ss_dssp ---------------------------------------------
T ss_pred CCEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEEECCeECcCC
Confidence 566666666677889999999999999999999999998766543
No 55
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.60 E-value=2.8e-15 Score=106.23 Aligned_cols=125 Identities=14% Similarity=0.247 Sum_probs=83.9
Q ss_pred CccccccC------CeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeee
Q psy16421 1 MTEVSREH------MGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA 74 (151)
Q Consensus 1 i~~v~~~d------~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~ 74 (151)
|.+++.+| +|.|+|.|.|..|...+..+.|.+. .+|.+...+ ....+.+|+.+.|.|.+
T Consensus 63 i~~~~~~d~~~~~d~G~Y~C~a~n~~g~~~s~~~~v~v~-------------~~p~~~~~~--~~~~v~~G~~v~l~C~~ 127 (388)
T 2v5m_A 63 FPPFRAEDYRQEVHAQVYACLARNQFGSIISRDVHVRAV-------------VAQYYEADV--NKEHVIRGNSAVIKCLI 127 (388)
T ss_dssp ECCCCGGGCCHHHHEEEEEEEEEETTEEEECCCEEEEEE-------------CCCCCCCBC--CCEEEETTSCEEECCBC
T ss_pred ecccChhhccccccCceEEEEEEccCCeEEecceEEEEc-------------cccccccCc--cceeeecCCcEEEEEEC
Confidence 35667776 9999999999988544556666553 345554444 45788899999999999
Q ss_pred cCCCC---CeEEEEeCCeeeEecc------------------------c-C-------CC-----------------CC-
Q psy16421 75 SGSPP---PSIMWRREGGEMITNS------------------------F-N-------NT-----------------VP- 101 (151)
Q Consensus 75 ~g~~~---~~~~W~~~~~~~~~~~------------------------~-~-------~~-----------------~~- 101 (151)
.+.+. +.+.|++++....... . + .. .+
T Consensus 128 ~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~ 207 (388)
T 2v5m_A 128 PSFVADFVEVVSWHTDEEENYFPGAEYDGKYLVLPSGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPI 207 (388)
T ss_dssp CTTTTTTEEEEEEEETTCCEECSSSCBTTTEEECTTSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCC
T ss_pred cCCCCCCcceEEEEeCCCcccccccCCCCcEEEccCCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCC
Confidence 87653 7899999543321110 0 0 00 00
Q ss_pred ----Ceee-eCCceeEeecCCcEEEEeeecccCCCeeEEEcCCc
Q psy16421 102 ----PIVK-IPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKG 140 (151)
Q Consensus 102 ----p~~~-~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~ 140 (151)
|.+. .......+.+|+.+.|.|.+.|.|.|.+.|+|++.
T Consensus 208 ~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~ 251 (388)
T 2v5m_A 208 SSSAPRTPALVQKPLELMVAHTISLLCPAQGFPAPSFRWYKFIE 251 (388)
T ss_dssp SCEEEECCSSCCCCEEEETTSCEEECCCCEEESCCEEEEEEECT
T ss_pred cCCCCcCccccCCceEEeeCCcEEEEEECCCCCCCEEEEEecCC
Confidence 0000 01233457889999999999999999999999753
No 56
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.58 E-value=9.2e-15 Score=98.31 Aligned_cols=65 Identities=20% Similarity=0.158 Sum_probs=30.5
Q ss_pred ccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCC-----
Q psy16421 4 VSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSP----- 78 (151)
Q Consensus 4 v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~----- 78 (151)
++++|+|.|+|.|. |.. ...+.+.+ ..++.+...+ ..+.+.+|+++.|.|.+.+.+
T Consensus 11 v~~~dsg~Y~C~a~---g~~-~~~~~~~~-------------~~~~~~~~~p--~~~~v~~G~~v~L~C~~~~~~~~~~~ 71 (254)
T 2c1o_A 11 VRPGTSVKLSCKAS---GYS-FTNYWMNW-------------LRELVMTQSP--LTLSVTIGQPASISCKSSQSLLYSNG 71 (254)
T ss_dssp --------------------------------------------CCCEEEEC--SEEEECTTSCEEEEEEESSCCBCSSS
T ss_pred ecCCccEEEEEcCc---hhh-hhhhhhhe-------------eeceeEEeCC--ceEEecCCCcEEEEeeccCcccccCC
Confidence 67899999999998 322 22222222 1355565545 568889999999999999987
Q ss_pred CCeEEEEeC
Q psy16421 79 PPSIMWRRE 87 (151)
Q Consensus 79 ~~~~~W~~~ 87 (151)
.+.+.|++.
T Consensus 72 ~~~v~W~k~ 80 (254)
T 2c1o_A 72 KTYLNWLLQ 80 (254)
T ss_dssp CBCEEEEEE
T ss_pred CCceEEEEe
Confidence 489999973
No 57
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.57 E-value=2.3e-15 Score=98.68 Aligned_cols=108 Identities=19% Similarity=0.260 Sum_probs=70.7
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.|.|..| .....+.|.|. .||.+...+ ....+.+|+.+.|.|.+.|.|.|
T Consensus 73 I~~v~~~D~G~Y~C~a~n~~g-~~~~~~~l~V~-------------~p~~~~~~~--~~~~v~~g~~~~l~C~~~G~P~P 136 (203)
T 4fa8_A 73 VTAANISHDGNYLCRMKLGET-EVTKQEHLSVV-------------KPLTLSVHS--ERSQFPDFSVLTVTCTVNAFPHP 136 (203)
T ss_dssp ESSCCGGGCEEEEEEEEETTE-EEEEEEEEEEE-------------EEEEEEEEE--EECCSSCSCCEEEEEEEEEESCC
T ss_pred EccCCHHHCeEEEEEEEcCCC-cEEEEEEEEec-------------CCceeeecc--eeEEEcCCCEEEEEEEcCCCCCC
Confidence 578999999999999999887 45556666664 456665544 45667789999999999999999
Q ss_pred eEEEEeCCeeeEecccCCCCCCeeeeCC-c------eeEeecCCcEEEEeeecc
Q psy16421 81 SIMWRREGGEMITNSFNNTVPPIVKIPS-Q------LIGAHEGQQLVLECISEA 127 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~~~~~p~~~~~~-~------~~~~~~g~~~~l~C~~~g 127 (151)
.+.|+++++....... ....+.... . ...+...+....+|.+..
T Consensus 137 ~v~W~~~~~~~~~~~~---~~~r~~~~~~g~l~il~i~~v~~~D~G~YtC~A~N 187 (203)
T 4fa8_A 137 HVQWLMPEGVEPAPTA---ANGGVMKEKDGSLSVAVDLSLPKPWHLPVTCVGKN 187 (203)
T ss_dssp EEEECCC---------------CCEECTTSCEEEEEEEEECSSCCCCEEEEEES
T ss_pred EEEEEECCeeecCccc---ccceEEEeCCCCEEEEEECCCCHHHCEEEEEEEEc
Confidence 9999985553322110 111111111 0 113456778889999864
No 58
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.56 E-value=1e-14 Score=105.81 Aligned_cols=77 Identities=14% Similarity=0.324 Sum_probs=51.5
Q ss_pred CccccccCCeEEEEEEEcCCCC-----------CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEE
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP-----------SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVS 69 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~-----------~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~ 69 (151)
|.+++.+|+|.|+|.+.|..+. .......|.|.. ....+|.+...+ ....+.+|+.+.
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~---------~~~~~P~i~~~~--~~~~~~~g~~v~ 151 (457)
T 1hzh_H 83 LRSLRSADTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSS---------ASTKGPSVFPLA--PSSKSTSGGTAA 151 (457)
T ss_dssp ECSCCGGGCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECS---------CCCBCCEEEEEC--CCSCCCTTCCEE
T ss_pred ECCCCcccCEEEEEEEecCCccccccccccccceECCcEEEEecC---------CCCCCCeEEecC--ccccccCCCcEE
Confidence 5789999999999999998640 122345566531 111245544332 123457899999
Q ss_pred EEeeecCC-CC-CeEEEEeCC
Q psy16421 70 MRCAASGS-PP-PSIMWRREG 88 (151)
Q Consensus 70 l~C~~~g~-~~-~~~~W~~~~ 88 (151)
|.|.+.|. |. +.+.|++++
T Consensus 152 L~C~~~g~~P~~~~v~W~k~~ 172 (457)
T 1hzh_H 152 LGCLVKDYFPEPVTVSWNSGA 172 (457)
T ss_dssp EEEEEESBBSCCCEEEETTTT
T ss_pred EEEEEeEEeCCCeEEEEEeCC
Confidence 99999886 64 789999844
No 59
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.56 E-value=1.5e-14 Score=104.06 Aligned_cols=71 Identities=23% Similarity=0.353 Sum_probs=48.8
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCC--
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSP-- 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~-- 78 (151)
|.+++.+|+|.|+|.|.|..+.. .+.+.+. ...++.....+ ....+.+|+.+.|.|.+.|.|
T Consensus 185 i~~~~~~d~G~Y~C~a~n~~~~~---~~~~~~~-----------~~~~~~~~~~~--~~~~v~~G~~v~L~C~~~g~p~~ 248 (438)
T 1qgc_4 185 LTKDEYERHNSYTCEATHKTSTS---PIVKSFN-----------RNECEVMLVES--GGGLVKPGGSLKLSCTASGFIFN 248 (438)
T ss_dssp EEHHHHHTCCEEEEEEEETTCSS---CEEEEEE-----------TTC-CCEEEEE--CCEEECTTCCEEEEEEEESSCGG
T ss_pred EeCcccCCCCeEEEEEEecccCC---ceecccc-----------cccceeEEecC--CceEEecCCcEEEEEEEcccccC
Confidence 34677889999999999987632 2333332 11122222222 456788999999999999988
Q ss_pred CCeEEEEeC
Q psy16421 79 PPSIMWRRE 87 (151)
Q Consensus 79 ~~~~~W~~~ 87 (151)
.+.+.|+++
T Consensus 249 ~~~v~W~k~ 257 (438)
T 1qgc_4 249 RCAMSWVRQ 257 (438)
T ss_dssp GSCEEEEEE
T ss_pred CcEEEEEEC
Confidence 679999984
No 60
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.55 E-value=6.4e-15 Score=103.88 Aligned_cols=123 Identities=14% Similarity=0.166 Sum_probs=79.1
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC----
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG---- 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g---- 76 (151)
|.+++.+|+|.|+|.|.|..+ .....+.+.|. .+|... ....+.+|+.+.|.|.+.+
T Consensus 146 i~~v~~~d~G~Y~C~a~~~~~-~~~~~~~l~v~-------------~~p~~~-----~~~~~~~G~~v~l~C~~~~~~~~ 206 (363)
T 1wio_A 146 VSQLELQDSGTWTCTVLQNQK-KVEFKIDIVVL-------------AFQKAS-----SIVYKKEGEQVEFSFPLAFTVEK 206 (363)
T ss_dssp ECSBCGGGCEECEEEEEETTE-EEEECCEECEE-------------CCSCSE-----EEEEEETBCCEEEECCCCCCCCS
T ss_pred EeeCChhcCCEEEEEEecCCC-eEEEEEEEEEe-------------cCCCCC-----CceEEecCCEEEEEEEEeccccc
Confidence 568899999999999998754 33334444432 233221 2456788999999998877
Q ss_pred -CCCCeEEEEeCCeeeEecc--------cCCC-------------C--CCeeeeC-------------------------
Q psy16421 77 -SPPPSIMWRREGGEMITNS--------FNNT-------------V--PPIVKIP------------------------- 107 (151)
Q Consensus 77 -~~~~~~~W~~~~~~~~~~~--------~~~~-------------~--~p~~~~~------------------------- 107 (151)
.|.|.+.|++ ++..+... .... . ...+.+.
T Consensus 207 ~~P~p~i~W~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~ 285 (363)
T 1wio_A 207 LTGSGELWWQA-ERASSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQ 285 (363)
T ss_dssp SCEEEEEEEEE-SSCCCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEE
T ss_pred CCCceeEEEec-CCCCccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEE
Confidence 7789999998 44433220 0000 0 0011100
Q ss_pred --CceeEeecCCcEEEEeeecccCCCe--eEEEcCCceec
Q psy16421 108 --SQLIGAHEGQQLVLECISEAYPKSV--NYWTREKGDMI 143 (151)
Q Consensus 108 --~~~~~~~~g~~~~l~C~~~g~p~~~--~~W~k~~~~~~ 143 (151)
...+....|+.+.|.|.+.|.|+|. +.|+|+|..+.
T Consensus 286 ~~~l~V~~v~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~ 325 (363)
T 1wio_A 286 EVNLVVMRATQLQKNLTCEVWGPTSPKLMLSLKLENKEAK 325 (363)
T ss_dssp EEEEEEEEECCCSSSEEEEEESSCCTTCCEEEECSSSSCS
T ss_pred EEeEEEEEecCCCeeEEEEEccccCCCccEEEEeCCCcee
Confidence 0011123489999999999999998 99999986554
No 61
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.55 E-value=1.3e-14 Score=104.84 Aligned_cols=76 Identities=21% Similarity=0.438 Sum_probs=50.7
Q ss_pred CccccccCCeEEEEEEEcCCCC--CCccceEEEEeccccceeEEeecCCCCeeE-eCCCCCceEeecCCeEEEEeeecCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP--SVSKRIMLIVQCQYFSKLYIYTSSMPPDIL-DYPTSSDIMVREGSNVSMRCAASGS 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~g~~~~l~C~~~g~ 77 (151)
|.+++.+|+|.|.|.+.|..+. .....+.|.|.. ....+|.+. ..+ ...+.+|+.+.|.|.+.|.
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~---------~~~~~P~i~~~~~---~~~~~~g~~v~L~C~~~g~ 150 (444)
T 1igt_B 83 MSRLKSEDTAMYYCARHGGYYAMDYWGQGTTVTVSS---------AKTTAPSVYPLAP---VCGDTTGSSVTLGCLVKGY 150 (444)
T ss_dssp ECSCCGGGCEEEEEEEECSSSCEEEEBCCEEEEECS---------CCCBCCEEEEECC---CSSCCCSSCEEEEEEEEEE
T ss_pred ECCCCHHHCEEEEEEEecCCcccccccCcEEEEecC---------CCCCCCceeEecc---cccCCCCCcEEEEEEEcce
Confidence 5789999999999999997652 122345566531 111244443 222 1234689999999999874
Q ss_pred -CCC-eEEEEeCC
Q psy16421 78 -PPP-SIMWRREG 88 (151)
Q Consensus 78 -~~~-~~~W~~~~ 88 (151)
|.| .+.|++++
T Consensus 151 ~P~p~~v~W~~~~ 163 (444)
T 1igt_B 151 FPEPVTLTWNSGS 163 (444)
T ss_dssp BSSCCEEEEGGGT
T ss_pred eCCCcEEEEecCC
Confidence 766 99999844
No 62
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.55 E-value=2.3e-15 Score=104.74 Aligned_cols=127 Identities=13% Similarity=0.191 Sum_probs=73.3
Q ss_pred ccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCee-EeCCCCCceEeecCCeEEEEeeecCC-CCC-
Q psy16421 4 VSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDI-LDYPTSSDIMVREGSNVSMRCAASGS-PPP- 80 (151)
Q Consensus 4 v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~g~~~~l~C~~~g~-~~~- 80 (151)
+..+|+|.|+|+|.|..+ .... .+.+.. ......|.+ ...+ ....+.+|+.+.|.|.+.|. |.+
T Consensus 79 ~~~~d~g~Y~C~a~n~~~-~~~~--~~~~~~--------~~~~~~p~v~~~~p--~~~~v~~G~~v~L~C~~~g~~P~p~ 145 (323)
T 2wqr_A 79 KHWLSDRTYTCQVTYQGH-TFED--STKKCA--------DSNPRGVSAYLSRP--SPFDLFIRKSPTITCLVVDLAPSKG 145 (323)
T ss_dssp HHHHTTCCEEEEEEETTE-EEEE--EECCCC--------CSSGGGCEEEECCC--CHHHHHTSSCCEEEEEEEEECCCSS
T ss_pred HHcCCCCcEEEEEEeCCC-Ccce--eeecCC--------CCCCCCCEEEEcCC--CHHHhccCCeEEEEEEEeccCCCCC
Confidence 345599999999999765 2211 111100 011122333 3333 34457789999999998874 555
Q ss_pred --eEEEEeCCeeeEecc--------c-------C-------------------C-----------------CCCCeeeeC
Q psy16421 81 --SIMWRREGGEMITNS--------F-------N-------------------N-----------------TVPPIVKIP 107 (151)
Q Consensus 81 --~~~W~~~~~~~~~~~--------~-------~-------------------~-----------------~~~p~~~~~ 107 (151)
.+.|++++++.+... . . + ..+|.+...
T Consensus 146 ~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~ 225 (323)
T 2wqr_A 146 TVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAF 225 (323)
T ss_dssp CCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEE
T ss_pred ceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEe
Confidence 899999554443210 0 0 0 023333222
Q ss_pred CceeEeecCCcEEEEeeecc-cCCC-eeEEEcCCceec
Q psy16421 108 SQLIGAHEGQQLVLECISEA-YPKS-VNYWTREKGDMI 143 (151)
Q Consensus 108 ~~~~~~~~g~~~~l~C~~~g-~p~~-~~~W~k~~~~~~ 143 (151)
+.......|+.+.|.|.+.| .|++ .+.|+|||..+.
T Consensus 226 ~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~ 263 (323)
T 2wqr_A 226 ATPEWPGSRDKRTLACLIQNFMPEDISVQWLHNEVQLP 263 (323)
T ss_dssp ECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred CCChHHhcCCcEEEEEEeeeeeCCCcEEEEEECCEECC
Confidence 11111233999999999998 4444 699999987654
No 63
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.55 E-value=1.8e-15 Score=115.56 Aligned_cols=124 Identities=24% Similarity=0.373 Sum_probs=27.0
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCC-CCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPT-SSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++.+|+|.|+|.+.|..+ ..+..+.|.|. .+|.+...+. .....+.+|+.+.|.|.+.+.|.
T Consensus 294 i~~v~~~d~G~Y~C~~~~~~~-~~~~~~~l~V~-------------~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~ 359 (772)
T 3v2a_R 294 IDGVTRSDQGLYTCAASSGLM-TKKNSTFVRVH-------------EKPFVAFGSGMESLVEATVGERVRIPAKYLGYPP 359 (772)
T ss_dssp ESSCCSTTCSEEEEEEECSSC-EEEEEEEEEEE-------------CCCC------------------------------
T ss_pred ECcCCcCCCeEEEEEEEcCCc-ceeEEEEEEEe-------------CCCeeEeccCCCCcEEEcCCCcEEEEEEEeeeCC
Confidence 567899999999999999877 45556666664 4454432221 13456788999999999999999
Q ss_pred CeEEEEeCCeeeEeccc-----C-----------------------------------CCCCCeeeeC---CceeEeecC
Q psy16421 80 PSIMWRREGGEMITNSF-----N-----------------------------------NTVPPIVKIP---SQLIGAHEG 116 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~-----~-----------------------------------~~~~p~~~~~---~~~~~~~~g 116 (151)
+.+.|++ +++.+.... . +..+|.+... .....+.+|
T Consensus 360 ~~v~W~~-~g~~l~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~~~~~~~~~~g 438 (772)
T 3v2a_R 360 PEIKWYK-NGIPLESNHTIKAGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYVPPQIGEKSLISPVDSYQYG 438 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CeEEEEE-CCEeCCCCceEccceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEecCCcccccccCCCccccCCC
Confidence 9999999 565543211 0 1223333221 111237889
Q ss_pred CcEEEEeeecccCCCe-eEEEcCC
Q psy16421 117 QQLVLECISEAYPKSV-NYWTREK 139 (151)
Q Consensus 117 ~~~~l~C~~~g~p~~~-~~W~k~~ 139 (151)
+.+.|.|.+.|.|.|. +.|++++
T Consensus 439 ~~~~l~C~~~g~p~p~~v~W~~~~ 462 (772)
T 3v2a_R 439 TTQTLTCTVYAIPPPHHIHWYWQL 462 (772)
T ss_dssp ------------------------
T ss_pred CcEEEEeEeccCCCCcEEEEEEcC
Confidence 9999999999999997 9999974
No 64
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.53 E-value=1.1e-13 Score=89.42 Aligned_cols=94 Identities=16% Similarity=0.345 Sum_probs=74.8
Q ss_pred CCeeEeCCCCCceEeecCCeEEEEeeec-CCCCCeEEEEeCCeeeEecc-------------------cC----------
Q psy16421 48 PPDILDYPTSSDIMVREGSNVSMRCAAS-GSPPPSIMWRREGGEMITNS-------------------FN---------- 97 (151)
Q Consensus 48 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~-g~~~~~~~W~~~~~~~~~~~-------------------~~---------- 97 (151)
+|.|...+ ....+.+|+++.|.|.+. +.|.+.+.|++ +++.+... ..
T Consensus 2 ~~~~~~~p--~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~ 78 (195)
T 2c5d_C 2 ESPFVGNP--GNITGARGLTGTLRCQLQVQGEPPEVHWLR-DGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLS 78 (195)
T ss_dssp CCSEEECC--CCEEECTTCCEEEEEEEEEESSCCCCEEEE-TTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCST
T ss_pred CCeeccCh--hheEEecCCcEEEecccccCCCCcEEEEEE-CCEEcccCCCCceEEEEccccccceeeccEEEEEecccc
Confidence 56677666 678899999999999998 89999999999 45544322 00
Q ss_pred ------------------------CCCCCeeeeCCceeEeecCCcEEEEeeecccCCC-eeEEEcCCceecc
Q psy16421 98 ------------------------NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKS-VNYWTREKGDMIA 144 (151)
Q Consensus 98 ------------------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~~~W~k~~~~~~~ 144 (151)
+..+|.+...+....+.+|+.+.|.|.+.|.|.| .+.|+|++..+..
T Consensus 79 d~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~ 150 (195)
T 2c5d_C 79 DTGQYQCLVFLGHQTFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLAT 150 (195)
T ss_dssp TCEEEEEEEEETTEEEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSS
T ss_pred CCcEEEEEEEeCCCceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccC
Confidence 2456777777777888999999999999999999 8999999776644
No 65
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.52 E-value=3.2e-13 Score=100.50 Aligned_cols=73 Identities=19% Similarity=0.292 Sum_probs=56.5
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC-CC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS-PP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-~~ 79 (151)
|.+++.+|+|.|+|.+.|..+ ..+..+.|.|. .+|.+...+ ....+.+|+.+.|.|.+.+. +.
T Consensus 79 I~~v~~~D~G~Y~C~~~n~~~-~~~~~~~l~V~-------------~~p~~~~~~--~~~~v~~G~~v~l~C~~~~~~~~ 142 (585)
T 2ocw_A 79 IAQLSQDDSGRYKCGLGINSR-GLSFDVSLEVS-------------QGPGLLNDT--KVYTVDLGRTVTINCPFKTENAQ 142 (585)
T ss_pred ECCCCcccCEEEEEEcccCCC-CceEEEEEEEe-------------cCccccCCC--ccEEEEcCCCEEEEEEecCCCCC
Confidence 568999999999999999877 34555555553 567776555 56788999999999999864 46
Q ss_pred CeEEEEeCCe
Q psy16421 80 PSIMWRREGG 89 (151)
Q Consensus 80 ~~~~W~~~~~ 89 (151)
+.+.|+++++
T Consensus 143 ~~v~W~k~~~ 152 (585)
T 2ocw_A 143 KRKSLYKQIG 152 (585)
T ss_pred ccEEEEECCC
Confidence 7899999543
No 66
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.52 E-value=1.7e-13 Score=88.10 Aligned_cols=94 Identities=18% Similarity=0.251 Sum_probs=71.9
Q ss_pred CeeEeCCCCCceEeecCCeEEEEeeecCCC-CCeEEEEeCCeeeEeccc----------C--------------------
Q psy16421 49 PDILDYPTSSDIMVREGSNVSMRCAASGSP-PPSIMWRREGGEMITNSF----------N-------------------- 97 (151)
Q Consensus 49 p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~-~~~~~W~~~~~~~~~~~~----------~-------------------- 97 (151)
+.+...+ ....+.+|+.+.|.|.+.+.+ .+.+.|++.+++.+.... .
T Consensus 3 ~~v~~~p--~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 80 (191)
T 1epf_A 3 LQVDIVP--SQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCV 80 (191)
T ss_dssp CCEEEES--SSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred eEEEecC--CCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEE
Confidence 3444444 567888999999999998876 889999984455444110 0
Q ss_pred ----------------CCCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 98 ----------------NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 ----------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+..+|.+...+....+.+|+++.|.|.+.|.|.|.+.|+|++..+..
T Consensus 81 ~~~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~ 143 (191)
T 1epf_A 81 VTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVIL 143 (191)
T ss_dssp EEETTTEEEEEEEEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGG
T ss_pred EEcCCCcceEEEEEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeec
Confidence 23466676677777889999999999999999999999999877654
No 67
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.51 E-value=1e-13 Score=89.25 Aligned_cols=95 Identities=25% Similarity=0.421 Sum_probs=74.0
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEeccc----------C-------------------
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSF----------N------------------- 97 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~----------~------------------- 97 (151)
.+|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++ +++.+.... .
T Consensus 4 ~~P~~~~~~--~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 80 (194)
T 2a38_A 4 QAPTFTQPL--QSVVVLEGSTATFEAHISGFPVPEVSWFR-DGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSL 80 (194)
T ss_dssp EEEEEEECC--CCEEEETTSCEEEEEEEEEESCCEEEEEE-SSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred CCCeEEccC--CceEEECCCEEEEEEEEEecCCCEEEEEE-CCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEE
Confidence 356676666 56888999999999999999999999999 555443221 0
Q ss_pred ----------------C---CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 98 ----------------N---TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 ----------------~---~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+ ..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|+|..+..
T Consensus 81 ~~~n~~~~~~~~~~l~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~ 146 (194)
T 2a38_A 81 KATNGSGQATSTAELLVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQS 146 (194)
T ss_dssp EEEETTEEEEEEEEEEEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCC
T ss_pred EEEcCCceEeEEEEEEEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCC
Confidence 1 1455666666677889999999999999999999999999776643
No 68
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.51 E-value=9.8e-15 Score=105.30 Aligned_cols=76 Identities=18% Similarity=0.514 Sum_probs=50.7
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC-CC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS-PP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-~~ 79 (151)
|.+++.+|+|.|.|.+.|..+ .....+.|.|.. ....+|.+.... ....+.+|+.+.|.|.+.|. |.
T Consensus 82 I~~v~~~D~G~Y~C~~~~~~~-~~~~~~~l~V~~---------~~~~~P~i~~~~--~~~~~~~G~~v~L~C~~~g~~P~ 149 (434)
T 1igy_B 82 LSSLTSDDSAVYYCVREGEVP-YWGQGTTVTVSS---------AKTTPPSVYPLA--PGSAAQTNSMVTLGCLVKGYFPE 149 (434)
T ss_dssp ECSBCGGGCSEECCCCSSSSC-CCCCCEECEECC---------SCCBCCCEEEEC--CCCCCCCTTEEEEEEEEEEEBSS
T ss_pred ECCCChHHCEEEEEEEEcccc-ccCCceEEEEcc---------CCCCCCeEEEcC--CccccCCCCcEEEEEEEeeecCC
Confidence 578999999999999998643 334455666531 111234443222 12235689999999999885 66
Q ss_pred C-eEEEEeCC
Q psy16421 80 P-SIMWRREG 88 (151)
Q Consensus 80 ~-~~~W~~~~ 88 (151)
+ .+.|++++
T Consensus 150 p~~v~W~k~~ 159 (434)
T 1igy_B 150 PVTVTWNSGS 159 (434)
T ss_dssp CCEEEETTTT
T ss_pred CeEEEEeeCC
Confidence 6 99999843
No 69
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.50 E-value=5e-14 Score=101.79 Aligned_cols=137 Identities=12% Similarity=0.092 Sum_probs=75.1
Q ss_pred ccccccCCeEEEEEEEcCCCCCCccceEEEEec-----cccceeEEeecCCCCee-EeCCCCCceE-eecCCeEEEEeee
Q psy16421 2 TEVSREHMGAYLCIASNGVPPSVSKRIMLIVQC-----QYFSKLYIYTSSMPPDI-LDYPTSSDIM-VREGSNVSMRCAA 74 (151)
Q Consensus 2 ~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~-----~~~~~~~~~~~~~~p~~-~~~~~~~~~~-~~~g~~~~l~C~~ 74 (151)
.++..+| |.|+|.|.|..+. ......+.+.. +.........+..+|.+ ...+ .... +.+|+.+.|.|.+
T Consensus 189 ~~~~~~d-g~Y~C~a~n~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p--~~~~~~~~G~~~~L~C~~ 264 (444)
T 1igt_B 189 TSSTWPS-QSITCNVAHPASS-TKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPP--KIKDVLMISLSPIVTCVV 264 (444)
T ss_dssp CSTTTTT-SCCEEEEEETTTT-EEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECC--CHHHHHCTTSCCEEEEEE
T ss_pred chhhcCC-CeEEEEEEeCCCC-cceEEEeccCCCCcccCCccccCCcccCCCceEEecCC--chhheeecCCCcEEEEEE
Confidence 4566778 9999999998773 21122211100 00000000011234554 3333 2222 4789999999999
Q ss_pred cCCC----CCeEEEEeCCeeeEecc---------c-------C------------------------------------C
Q psy16421 75 SGSP----PPSIMWRREGGEMITNS---------F-------N------------------------------------N 98 (151)
Q Consensus 75 ~g~~----~~~~~W~~~~~~~~~~~---------~-------~------------------------------------~ 98 (151)
.|.+ .+.+.|+++ ++.+... . . +
T Consensus 265 ~g~~~~p~~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~ 343 (444)
T 1igt_B 265 VDVSEDDPDVQISWFVN-NVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDLPAPIERTISKPKGS 343 (444)
T ss_dssp EEECTTCCCCEEEEEET-TEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTCSSCEEEEEECCCCC
T ss_pred eecccCCCCeEEEEEEC-CccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCCCCceEEEEeccCCC
Confidence 8873 368999994 4443210 0 0 1
Q ss_pred CCCCeeeeCCceeEeecCCcEEEEeeecc-cCCC-eeEEEcCCceec
Q psy16421 99 TVPPIVKIPSQLIGAHEGQQLVLECISEA-YPKS-VNYWTREKGDMI 143 (151)
Q Consensus 99 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~-~~~W~k~~~~~~ 143 (151)
..+|.+...+.......+..+.|.|.+.| .|++ .++|+|+|..+.
T Consensus 344 ~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 390 (444)
T 1igt_B 344 VRAPQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKTEL 390 (444)
T ss_dssp CBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred CCCCEEEEeCCChHHccCCeEEEEEEEEeeeCCCCEEEEEECCEEcc
Confidence 12344433222111223445999999999 5666 799999987653
No 70
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.50 E-value=2e-13 Score=87.22 Aligned_cols=85 Identities=19% Similarity=0.403 Sum_probs=67.9
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEeccc------------C----------------------------
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSF------------N---------------------------- 97 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~------------~---------------------------- 97 (151)
..+.+.+|+.+.|.|.+.+.|.+.+.|++ ++..+.... .
T Consensus 10 ~~~~v~~G~~v~l~C~~~~~p~~~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~ 88 (182)
T 1rhf_A 10 VKLTVSQGQPVKLNCSVEGMEEPDIQWVK-DGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEIS 88 (182)
T ss_dssp EEEEEETTCCEEEEEEEESCSSCCEEEEE-TTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEEC
T ss_pred cceEEeCCCcEEEEEEEeCCCCCeEEEEE-CCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEE
Confidence 56778899999999999999999999999 454432210 0
Q ss_pred ------CCCCCeeeeCCceeEeecCCcEEEEeeecccCCC-eeEEEcCCceec
Q psy16421 98 ------NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKS-VNYWTREKGDMI 143 (151)
Q Consensus 98 ------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~~~W~k~~~~~~ 143 (151)
+..+|.+...+....+.+|+.+.|.|.+.|.|.| .+.|++++..+.
T Consensus 89 ~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~ 141 (182)
T 1rhf_A 89 QPVWLTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIG 141 (182)
T ss_dssp CCEEEEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECS
T ss_pred EEEEEEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECC
Confidence 2346777777777789999999999999999999 899999977653
No 71
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.49 E-value=3.1e-13 Score=88.54 Aligned_cols=95 Identities=22% Similarity=0.416 Sum_probs=72.3
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecc----------------------cC-------
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNS----------------------FN------- 97 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~----------------------~~------- 97 (151)
.+|.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|+++ ++.+... ..
T Consensus 5 ~~P~~~~~p--~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 81 (212)
T 2yd6_A 5 TPPRFTRTP--VDQTGVSGGVASFICQATGDPRPKIVWNKK-GKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYEC 81 (212)
T ss_dssp EEEEEEECC--CCEEEETTSCEEEEEEEEEESCCEEEEEET-TEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEE
T ss_pred CCCeEEeCc--ceeEEecCCeEEEEEEEeeCCCCEEEEEEC-CcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEE
Confidence 567777776 568889999999999999999999999994 4432211 00
Q ss_pred ----------------C-------CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 98 ----------------N-------TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 ----------------~-------~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+ ...|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|+|..+..
T Consensus 82 ~a~n~~g~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~ 151 (212)
T 2yd6_A 82 VASNNVGEISVSTRLTVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDT 151 (212)
T ss_dssp EEEETTEEEEEEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC--
T ss_pred EEEcCCCcEEEEEEEEEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccC
Confidence 1 1125666666677788999999999999999999999999876654
No 72
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.49 E-value=1.1e-12 Score=85.81 Aligned_cols=95 Identities=27% Similarity=0.570 Sum_probs=74.1
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecc------------------------cC-----
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNS------------------------FN----- 97 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~------------------------~~----- 97 (151)
.+|.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|++ ++..+... ..
T Consensus 5 ~pP~~~~~p--~~~~v~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~ 81 (212)
T 2yd1_A 5 HPPEIIRKP--QNQGVRVGGVASFYCAARGDPPPSIVWRK-NGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYE 81 (212)
T ss_dssp CCCEEEECC--CCEEEETTSCEEEEEEEECSSCCEEEEEE-TTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEE
T ss_pred CCCEEEcCC--CceEEecCCEEEEEEEEccCCCCeEEEEE-CCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEE
Confidence 578888877 67889999999999999999999999999 44443200 00
Q ss_pred ------------------CC-------CCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 98 ------------------NT-------VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 ------------------~~-------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+. .+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++++..+..
T Consensus 82 C~~~n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~ 153 (212)
T 2yd1_A 82 CVAENGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDM 153 (212)
T ss_dssp EEEECSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCT
T ss_pred EEEEeCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEccc
Confidence 01 125666666677788999999999999999999999999776654
No 73
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.48 E-value=8.4e-14 Score=89.57 Aligned_cols=95 Identities=21% Similarity=0.331 Sum_probs=72.1
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccC-----------------------------
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFN----------------------------- 97 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~----------------------------- 97 (151)
.+|.+...+ ....+.+|+++.|.|.+.+.|.+.+.|++ ++..+.....
T Consensus 6 ~~P~i~~~~--~~~~~~~G~~v~l~C~~~~~p~~~i~W~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (192)
T 2iep_A 6 KAPVITTPL--ETVDALVEEVATFMCAVESYPQPEISWTR-NKILIKLFDTRYSIRENGQLLTILSVEDSDDGIYCCTAN 82 (192)
T ss_dssp EEEEESSCC--CEEEEETTSCEEEECCEEEESCCEEEEEE-TTEECCTTCTTEEEEGGGTEEEESSCCGGGCEEEEEEEE
T ss_pred CCceeecCc--cceeeeCCCcEEEEeeCCCCCCCeEEEEE-CCEEccccCccEEEcCCccEEEEcCCCcccCeEEEEEEE
Confidence 456665555 56788899999999999998999999999 4544332110
Q ss_pred --------------CCCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 98 --------------NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 --------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+|++..+..
T Consensus 83 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~ 143 (192)
T 2iep_A 83 NGVGGAVESCGALQVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRE 143 (192)
T ss_dssp CSSSCCEEEEEEEEEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCC
T ss_pred cCCCceeEeEEEEEEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccC
Confidence 12345555556677889999999999999999999999999776543
No 74
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.48 E-value=6.2e-14 Score=101.72 Aligned_cols=138 Identities=12% Similarity=0.111 Sum_probs=74.4
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccc--c--ceeEEeecCCCCee-EeCCCCCceE-eecCCeEEEEeee
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQY--F--SKLYIYTSSMPPDI-LDYPTSSDIM-VREGSNVSMRCAA 74 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~--~--~~~~~~~~~~~p~~-~~~~~~~~~~-~~~g~~~~l~C~~ 74 (151)
|.++..+| |.|+|.|.|..+. ......+.+.... . .......+..+|.+ ...+ .... +.+|+.+.|.|.+
T Consensus 198 i~~~~~~d-G~Y~C~a~n~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p--~~~~~~~~G~~v~L~C~~ 273 (457)
T 1hzh_H 198 VPSSSLGT-QTYICNVNHKPSN-TKVDKKAEPKSCDKTHTCPPCPAPELLGGPSVFLFPP--KPKDTLMISRTPEVTCVV 273 (457)
T ss_dssp ECSGGGGT-SCCEEEEEEGGGT-EEEEEECCCCCSCSSCSCCSCCCCCCSSSCEEEEECC--CHHHHHCTTSCCCEEEEE
T ss_pred ecccccCC-ceEEEEEEeCCCC-cceeEEecccCCCcccccCCCCCccccCCceEEeECc--CchhhcccCCceEEEEEE
Confidence 35677788 9999999997652 2112222111000 0 00000001124554 3333 2222 5679999999999
Q ss_pred cCCCCC----eEEEEeCCeeeEecc---------c-------------------C------------------------C
Q psy16421 75 SGSPPP----SIMWRREGGEMITNS---------F-------------------N------------------------N 98 (151)
Q Consensus 75 ~g~~~~----~~~W~~~~~~~~~~~---------~-------------------~------------------------~ 98 (151)
.|.+++ .+.|+++ ++.+... . . .
T Consensus 274 ~g~~p~p~~~~i~W~k~-~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~ 352 (457)
T 1hzh_H 274 VDVSHEDPEVKFNWYVD-GVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQ 352 (457)
T ss_dssp ECCCTTCCCCEEEEEET-TEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCEEEEEECTTSSSCEEEEECCCCCC
T ss_pred EcccCCCCceEEEEEeC-CccccccccccceecCCCcEEEEEEEEECHHHccCCCcEEEEEeCCCCCCcceEEEEcccCC
Confidence 987543 8999994 4433110 0 0 0
Q ss_pred CCCCeeeeCCceeEeecCCcEEEEeeecccCCC--eeEEEcCCceec
Q psy16421 99 TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKS--VNYWTREKGDMI 143 (151)
Q Consensus 99 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~--~~~W~k~~~~~~ 143 (151)
..+|.+...+.......+..+.|.|.+.|.|++ .+.|+|||..+.
T Consensus 353 ~~~P~v~~~~~~~~~~~~~~~~l~C~~~g~~p~~~~v~W~k~g~~l~ 399 (457)
T 1hzh_H 353 PREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPEN 399 (457)
T ss_dssp CBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred CCCCeEEEECCCccccCCCcEEEEEEEEeEECCCCEEEEEECCEECc
Confidence 123433332221111234449999999997554 799999987653
No 75
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.48 E-value=7.3e-13 Score=85.52 Aligned_cols=105 Identities=19% Similarity=0.385 Sum_probs=73.7
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..+...+..+.|.| ..+|.+...+ ....+.+|+.+.|.|.+.|.|.|
T Consensus 72 i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V-------------~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p 136 (195)
T 2c5d_C 72 ITSLQLSDTGQYQCLVFLGHQTFVSQPGYVGL-------------EGLPYFLEEP--EDRTVAANTPFNLSCQAQGPPEP 136 (195)
T ss_dssp ESSCCSTTCEEEEEEEEETTEEEECCCEEEEE-------------CCSCEEEECC--CCEEECTTCCEEEEEEEECSSCC
T ss_pred EEeccccCCcEEEEEEEeCCCceecccEEEEE-------------ecCCeEEcCC--CcEEEcCCCEEEEEeECCCCCCC
Confidence 56889999999999999987744444566655 3678887766 56788899999999999999999
Q ss_pred -eEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 81 -SIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 81 -~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
.+.|++ ++..+...........+.+... .+.....|.+..
T Consensus 137 ~~v~W~~-~~~~~~~~~~~~~~~~L~i~~~------~d~G~Y~C~a~N 177 (195)
T 2c5d_C 137 VDLLWLQ-DAVPLATAPGHGPQRSLHVPGL------NKTSSFSCEAHN 177 (195)
T ss_dssp CEEEEEE-SSCBSSSSTTSSCCEEEEECCC------SSCEEEEEEEEE
T ss_pred CEEEEEE-CCEeccCCCCcCCCCeEEEccc------ccCceEEEEEEc
Confidence 999999 5655443221111122333221 145689999864
No 76
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.48 E-value=6e-13 Score=85.92 Aligned_cols=95 Identities=23% Similarity=0.430 Sum_probs=70.3
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEeccc-C----------------------------
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSF-N---------------------------- 97 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~-~---------------------------- 97 (151)
.+|.+...+ ..+.+.+|+.+.|.|.+.+.|.+.+.|++ ++..+.... .
T Consensus 3 ~~P~~~~~~--~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C 79 (197)
T 2j8h_A 3 MAPHFKEEL--RNLNVRYQSNATLVCKVTGHPKPIVKWYR-QGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQV 79 (197)
T ss_dssp CCCEEEECC--CCEEEETTSCEEEEEEEECSSCCEEEEEE-TTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEE
T ss_pred CCCEEEEcC--CccEEcCCCEEEEEEEEeecCCCEEEEEE-CCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEE
Confidence 467787776 67889999999999999999999999999 454433211 0
Q ss_pred ----------------CCCCCeeeeC-----CceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 98 ----------------NTVPPIVKIP-----SQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 ----------------~~~~p~~~~~-----~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+..+|.+..+ +....+.+|+.+.|.|.+.|.|.|.+.|+|++..+..
T Consensus 80 ~~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~ 147 (197)
T 2j8h_A 80 RATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDN 147 (197)
T ss_dssp EEEETTEEEEEEEEEEEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECS
T ss_pred EEEECCCceeEEEEEEEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeec
Confidence 1112222211 2445678899999999999999999999999876653
No 77
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.46 E-value=6.5e-14 Score=100.99 Aligned_cols=137 Identities=8% Similarity=0.086 Sum_probs=74.5
Q ss_pred ccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceE-eecCCeEEEEeeecCCC--
Q psy16421 2 TEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIM-VREGSNVSMRCAASGSP-- 78 (151)
Q Consensus 2 ~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~g~~~~l~C~~~g~~-- 78 (151)
.+++.+| |.|+|.|.|..+. ......+.+....-....+.....+..+...+ .... +.+|+.+.|.|.+.|.+
T Consensus 185 ~~~~~~d-g~Y~C~a~n~~~~-~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p--~~~~~v~~G~~~~L~C~~~g~~p~ 260 (434)
T 1igy_B 185 PSSPRPS-ETVTCNVAHPASS-TKVDKKIVPRDCGCKPCICTVPEVSSVFIFPP--KPKDTLLITVTPKVTCVVVDISKD 260 (434)
T ss_dssp ETTTTTS-SCCEEEEECTTTT-CCEEEECCCCCCCCCCCCCCCSSSCCEEEECC--CHHHHHSTTSCCEEEEEECCCCSS
T ss_pred cchhcCC-CcEEEEEEeCCCC-ccceeeccCCCCCCccccCCCCcCcEEEEeCC--ChHHhcccCCCcEEEEEEeccccC
Confidence 3556678 9999999999873 22222221100000000000000122233332 2122 77899999999998874
Q ss_pred --CCeEEEEeCCeeeEecc---------c-------C------------------------------C------CCCCee
Q psy16421 79 --PPSIMWRREGGEMITNS---------F-------N------------------------------N------TVPPIV 104 (151)
Q Consensus 79 --~~~~~W~~~~~~~~~~~---------~-------~------------------------------~------~~~p~~ 104 (151)
.+.+.|+++ +..+... . . + ..+|.+
T Consensus 261 P~~~~i~W~k~-~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v 339 (434)
T 1igy_B 261 DPEVQFSWFVD-NVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISKTKGKPRAPQV 339 (434)
T ss_dssp CCCCCBCBBSS-SCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCCCCSCCBCCCC
T ss_pred CCCeEEEEEeC-CcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEeccCCCCcCCEE
Confidence 358999994 4433210 0 0 0 123433
Q ss_pred eeCCceeEeecCCcEEEEeeeccc-CCC-eeEEEcCCceec
Q psy16421 105 KIPSQLIGAHEGQQLVLECISEAY-PKS-VNYWTREKGDMI 143 (151)
Q Consensus 105 ~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~~~W~k~~~~~~ 143 (151)
...+.......|+.+.|.|.+.|. |++ .|+|+|+|..+.
T Consensus 340 ~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 380 (434)
T 1igy_B 340 YTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAPE 380 (434)
T ss_dssp EEECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCS
T ss_pred EEECCCHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEecC
Confidence 333222223467789999999995 433 799999987663
No 78
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.46 E-value=1e-12 Score=86.55 Aligned_cols=96 Identities=20% Similarity=0.278 Sum_probs=72.8
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccC-----------------------------
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFN----------------------------- 97 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~----------------------------- 97 (151)
..+.+...+ ..+.+.+|+.+.|.|.+.+.|.+.+.|++ ++..+.....
T Consensus 17 ~~~~i~~~p--~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s 93 (218)
T 3k0w_A 17 RGSKITVNP--ESKAVLAGQFVKLCCRATGHPFVQYQWFK-MNKEIPNGNTSELIFNAVHVKDAGFYVCRVNNNFTFEFS 93 (218)
T ss_dssp --CCEEECC--CCEEEETTSBEEEECEETTTTSSEEEEEE-TTEECTTCCSSEEEETTCCGGGCEEEEEEEECTTCCEEC
T ss_pred CCCEEEECC--CCeEEeCCCcEEEEeeecCCCCCEEEEEE-CCEECCCCCCCEEEEccCChhhCeEeEEEEEcCCCCcee
Confidence 456666666 67889999999999999999999999999 4554432211
Q ss_pred ------CCC---------------CCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 98 ------NTV---------------PPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 98 ------~~~---------------~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
+.. +|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+|++..+...
T Consensus 94 ~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~ 162 (218)
T 3k0w_A 94 QWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE 162 (218)
T ss_dssp CCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTC
T ss_pred eEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCC
Confidence 001 145666666778899999999999999999999999997766543
No 79
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.46 E-value=2.2e-12 Score=87.71 Aligned_cols=96 Identities=18% Similarity=0.321 Sum_probs=74.2
Q ss_pred CCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccC----------------------------
Q psy16421 46 SMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFN---------------------------- 97 (151)
Q Consensus 46 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~---------------------------- 97 (151)
..||.+...+ ..+.+.+|+.+.|.|.+.+.|.+.+.|++ ++..+.....
T Consensus 3 ~~pP~~~~~p--~~~~~~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~ 79 (284)
T 2rik_A 3 MAPPFFDLKP--VSVDLALGESGTFKCHVTGTAPIKITWAK-DNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCY 79 (284)
T ss_dssp CCCCEEEECC--CCEEEETTCCEEEEEEEESSSCCEEEEEE-TTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred cCCCEEEccc--cceEecCCCcEEEEEEEEcCCCCEEEEEE-CCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEE
Confidence 3678888877 67889999999999999999999999999 4544432110
Q ss_pred ---------------CCCCCeeeeC-CceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 98 ---------------NTVPPIVKIP-SQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 ---------------~~~~p~~~~~-~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+..+|.+... .....+.+|+.+.|.|.+.|.|.+.+.|+|++..+..
T Consensus 80 ~~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~ 142 (284)
T 2rik_A 80 ASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQE 142 (284)
T ss_dssp EEETTEEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCC
T ss_pred EEECCceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcC
Confidence 2345555544 3455688999999999999999999999999876654
No 80
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.46 E-value=7e-13 Score=86.92 Aligned_cols=95 Identities=20% Similarity=0.507 Sum_probs=73.5
Q ss_pred CCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccC----------------------------
Q psy16421 46 SMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFN---------------------------- 97 (151)
Q Consensus 46 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~---------------------------- 97 (151)
..+|.+...+ ..+.+.+|+++.|.|.+.+.|.+.+.|++ ++..+.....
T Consensus 7 ~~~P~i~~~p--~~~~v~~G~~v~L~C~~~g~p~~~v~W~~-~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~ 83 (217)
T 2vr9_A 7 YQSPRIIEHP--TDLVVKKNEPATLNCKVEGKPEPTIEWFK-DGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGE 83 (217)
T ss_dssp CCCCEEEECC--CCEEECTTSCEEECCEEECSSCCEEEEEE-TTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEE
T ss_pred cCCCEEecCC--CceEEeCCCcEEEEEEcCCCCCCeEEEEE-CCcCccCCCccceeEEecCCceEEEEEeccCCcccCce
Confidence 3678888877 57889999999999999999999999999 5555432100
Q ss_pred ---------------------CCCCCeeeeCCceeEeecCCcEEEEeee-cccCCCeeEEEcCCceec
Q psy16421 98 ---------------------NTVPPIVKIPSQLIGAHEGQQLVLECIS-EAYPKSVNYWTREKGDMI 143 (151)
Q Consensus 98 ---------------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~~W~k~~~~~~ 143 (151)
...+|.+...+....+.+|+.+.|.|.+ .|.|.|.+.|+|+|..+.
T Consensus 84 Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~ 151 (217)
T 2vr9_A 84 YWCVAKNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLD 151 (217)
T ss_dssp EEEEEEETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEEC
T ss_pred EEEEEecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCC
Confidence 0113344445566678899999999999 899999999999987665
No 81
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.45 E-value=1.2e-12 Score=84.10 Aligned_cols=108 Identities=17% Similarity=0.308 Sum_probs=72.9
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..+...+..+.|.|. .+|.+...+ ....+.+|+.+.|.|.+.|.|.|
T Consensus 62 i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~v~-------------~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p 126 (189)
T 2v44_A 62 IYNANIEDAGIYRCQATDAKGQTQEATVVLEIY-------------QKLTFREVV--SPQEFKQGEDAEVVCRVSSSPAP 126 (189)
T ss_dssp ECSCCGGGCEEEEEEEECTTSCEEEEEEEEEEE-------------CCCEEESCC--CSEEEETTSCEEECCEEECSSCC
T ss_pred EccCCcccCeEEEEEEEeCCCCcEEEEEEEEEe-------------cCCceeecC--CcEEEeCCCCEEEEEEECcCCCC
Confidence 568899999999999999877544555555553 566666554 45778899999999999999999
Q ss_pred eEEEEeCCeeeEecccC----CCCCCeeeeCCceeEeecCCcEEEEeeeccc
Q psy16421 81 SIMWRREGGEMITNSFN----NTVPPIVKIPSQLIGAHEGQQLVLECISEAY 128 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~ 128 (151)
.+.|+++ +..+..... ......+.+.. +...+.....|.+...
T Consensus 127 ~v~W~~~-~~~~~~~~~~~~~~~~~~~L~i~~----v~~~d~G~Y~C~a~n~ 173 (189)
T 2v44_A 127 AVSWLYH-NEEVTTISDNRFAMLANNNLQILN----INKSDEGIYRCEGRVE 173 (189)
T ss_dssp EEEEEEE-C--CEECCCTTEEECTTSCEEETT----CCGGGCEEEEEEEEET
T ss_pred cEEEEEC-CcEEeccCCCCEEEecCCcEEEEE----cCcccCeEEEEEEEcc
Confidence 9999994 444432110 00011222221 3456777999998643
No 82
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.45 E-value=1.9e-12 Score=83.25 Aligned_cols=109 Identities=20% Similarity=0.324 Sum_probs=73.9
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|. + ..+..+.|.|. .+|.+...+ ....+.+|+.+.|.|.+.|.|.|
T Consensus 60 i~~~~~~d~G~Y~C~~~n~-~-~~~~~~~l~V~-------------~~p~~~~~~--~~~~~~~g~~v~l~C~~~g~p~p 122 (190)
T 2wv3_A 60 INKPRAEDSGEYHCVYHFV-S-APKANATIEVK-------------AAPDITGHK--RSENKNEGQDAMMYCKSVGYPHP 122 (190)
T ss_dssp ESSCCGGGCEEEEEEEEET-T-EEEEEEEEEEE-------------CCCEEEEEC--SEEEEETTSCEEEEEEEECSSCC
T ss_pred EecCCcccCEEEEEEEEeC-C-cccccEEEEEe-------------cCCcccccC--CcceeeCCCcEEEEEEeCccCCC
Confidence 5688999999999999998 5 55566666654 577777655 56778899999999999999999
Q ss_pred eEEEEeC-CeeeEecccCCCCCCeeeeC-----CceeEee-cCCcEEEEeeecc
Q psy16421 81 SIMWRRE-GGEMITNSFNNTVPPIVKIP-----SQLIGAH-EGQQLVLECISEA 127 (151)
Q Consensus 81 ~~~W~~~-~~~~~~~~~~~~~~p~~~~~-----~~~~~~~-~g~~~~l~C~~~g 127 (151)
.+.|++. ++..+..... ...-.+... .....+. ..+.....|.+..
T Consensus 123 ~i~W~~~~~g~~~~~~~~-~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a~N 175 (190)
T 2wv3_A 123 EWMWRKKENGVFEEISNS-SGRFFIINKENYTELNIVNLQITEDPGEYECNATN 175 (190)
T ss_dssp EEEEEEEETTEEEECCCT-TSCEEEEECSSEEEEEECSCCTTTSCEEEEEEEEC
T ss_pred ceEEEEcCCCceeeeecC-CCeEEEecCCCeeEEEEEeccccCCCEEEEEEEEe
Confidence 9999994 3445442110 001011110 0011234 5778889999864
No 83
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.45 E-value=1.1e-12 Score=84.36 Aligned_cols=108 Identities=15% Similarity=0.316 Sum_probs=75.0
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..+...+..+.|.| ..+|.+...+ ....+.+|+.+.|.|.+.|.|.+
T Consensus 66 i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v-------------~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~ 130 (191)
T 1epf_A 66 IYNANIDDAGIYKCVVTAEDGTQSEATVNVKI-------------FQKLMFKNAP--TPQEFKEGEDAVIVCDVVSSLPP 130 (191)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEEEEEEEEE-------------ECCSEEEECC--SSEECCTTSCEEECCEEECSSCC
T ss_pred EccCCcccCEEEEEEEEcCCCcceEEEEEEEe-------------ecCceEecCC--CcEeecCCCeEEEEEEECCCCCC
Confidence 56889999999999999987534444555544 3677777766 56788899999999999999999
Q ss_pred eEEEEeCCeeeEecccC----CCCCCeeeeCCceeEeecCCcEEEEeeeccc
Q psy16421 81 SIMWRREGGEMITNSFN----NTVPPIVKIPSQLIGAHEGQQLVLECISEAY 128 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~ 128 (151)
.+.|++ ++..+..... ......+.+. .+...+.....|.+...
T Consensus 131 ~v~W~~-~~~~~~~~~~~~~~~~~~~~L~i~----~~~~~d~G~Y~C~a~n~ 177 (191)
T 1epf_A 131 TIIWKH-KGRDVILKKDVRFIVLSNNYLQIR----GIKKTDEGTYRCEGRIL 177 (191)
T ss_dssp EEEEEE-TTEEGGGGCCTTEEECTTSCEEET----TCCGGGCEEEEEEEEEG
T ss_pred EEEEEE-CCEEeeccCCceEEEecCCeEEEC----CCChhhCEEEEEEEEEe
Confidence 999999 5555442211 0011122222 13456777899998653
No 84
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.44 E-value=7.2e-13 Score=85.07 Aligned_cols=86 Identities=19% Similarity=0.300 Sum_probs=64.5
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccC----------------------------------------
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFN---------------------------------------- 97 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~---------------------------------------- 97 (151)
....+.+|+++.|.|.+.+.|. .+.|++.+++.+....+
T Consensus 10 ~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~ 88 (189)
T 2v44_A 10 SKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEAT 88 (189)
T ss_dssp SEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEE
T ss_pred CceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEE
Confidence 5677889999999999988877 89999954544322111
Q ss_pred ----CCCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 98 ----NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 ----~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+..
T Consensus 89 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~ 139 (189)
T 2v44_A 89 VVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTT 139 (189)
T ss_dssp EEEEEECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEE
T ss_pred EEEEEecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEec
Confidence 22355555555667789999999999999999999999999876653
No 85
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.44 E-value=7.6e-13 Score=84.49 Aligned_cols=103 Identities=25% Similarity=0.524 Sum_probs=74.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..+...+..+.|.|. .+|.+...+ ....+.+|+.+.|.|.+.+.|.|
T Consensus 64 i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~V~-------------~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p 128 (182)
T 1rhf_A 64 LKSVERSDAGRYWCQVEDGGETEISQPVWLTVE-------------GVPFFTVEP--KDLAVPPNAPFQLSCEAVGPPEP 128 (182)
T ss_dssp ESSCCGGGCEEEEEEESSCTTCEECCCEEEEEE-------------CSCEEEECC--CCEEECTTCCEEEEEEEECSSSC
T ss_pred EeecCcccCeEEEEEEEcCCCcEEEEEEEEEEe-------------cCCeEEecC--cceEecCCCEEEEEeEecCCCCC
Confidence 568899999999999999876445566777664 678877766 56788899999999999999998
Q ss_pred -eEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 81 -SIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 81 -~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
.+.|++ ++..+.... .....+.+... .+.....|.+..
T Consensus 129 ~~v~W~~-~~~~~~~~~--~~~~~L~i~~~------~d~G~Y~C~a~N 167 (182)
T 1rhf_A 129 VTIVWWR-GTTKIGGPA--PSPSVLNVTGV------TQSTMFSCEAHN 167 (182)
T ss_dssp CEEEEEE-TTEECSCSE--ESSEEEEECCC------SSCEEEEEEEEE
T ss_pred CEEEEEc-CCeECCCCC--CCceEEEEecc------ccCeEEEEEEEC
Confidence 999999 555543211 11222333221 355689999864
No 86
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.44 E-value=1.3e-12 Score=89.13 Aligned_cols=95 Identities=18% Similarity=0.242 Sum_probs=71.8
Q ss_pred CCeeEeCCCCCceEeecCCeEEEEeeecCCC-CCeEEEEeCCeeeEeccc----------C-------------------
Q psy16421 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSP-PPSIMWRREGGEMITNSF----------N------------------- 97 (151)
Q Consensus 48 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~-~~~~~W~~~~~~~~~~~~----------~------------------- 97 (151)
++.+...+ ....+.+|+.+.|.|.+.+.+ .+.+.|++.++..+.... .
T Consensus 2 ~~~v~~~p--~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 79 (291)
T 1qz1_A 2 VLQVDIVP--SQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKC 79 (291)
T ss_dssp CCCEEEES--SSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred CcceEecC--CCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEE
Confidence 34555555 567889999999999999976 689999984454433110 0
Q ss_pred -----------------CCCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 98 -----------------NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 -----------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+..
T Consensus 80 ~~~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~ 143 (291)
T 1qz1_A 80 VVTAEDGTQSEATVNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVIL 143 (291)
T ss_dssp EEECTTSCEEEEEEEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSST
T ss_pred EEEcCCCCeeEEEEEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEccc
Confidence 22356666667777899999999999999999999999999876644
No 87
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.43 E-value=1.1e-12 Score=84.39 Aligned_cols=95 Identities=20% Similarity=0.298 Sum_probs=69.4
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccC-----------------------------
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFN----------------------------- 97 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~----------------------------- 97 (151)
.+|.+...+ ..+.+.+|+.+.|.|.+.+.|.+.+.|++ ++..+.....
T Consensus 6 ~~P~~~~~~--~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 82 (197)
T 3lcy_A 6 EAPGIRKEM--KDVTTKLGEAAQLSCQIVGRPLPDIKWYR-FGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIA 82 (197)
T ss_dssp EEEEEEECC--CCEEEETTSEEEEEEEEEEESCCEEEEEE-TTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEE
T ss_pred CCCcccccC--CceEEeCCCcEEEEEEEecCCCCEEEEEE-CCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEE
Confidence 467777666 57889999999999999998999999999 4554432211
Q ss_pred --------------CCCCCeeee---CCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 98 --------------NTVPPIVKI---PSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 --------------~~~~p~~~~---~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+..+|.+.. ......+.+|+.+.|.|.+.|.|.|.+.|++++..+..
T Consensus 83 ~n~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~ 146 (197)
T 3lcy_A 83 TNEVGEVETSSKLLLQATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQN 146 (197)
T ss_dssp ECSSCEEEEEEEEEEEEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCC
T ss_pred ECCCCceeEEEEEEEEcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCC
Confidence 111222221 12445678899999999999999999999998766543
No 88
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.42 E-value=9.2e-13 Score=96.08 Aligned_cols=138 Identities=14% Similarity=0.194 Sum_probs=77.2
Q ss_pred ccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeE------EeecCCCCee-EeCCCCCceEeecCCeEEEEeee
Q psy16421 2 TEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLY------IYTSSMPPDI-LDYPTSSDIMVREGSNVSMRCAA 74 (151)
Q Consensus 2 ~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~------~~~~~~~p~~-~~~~~~~~~~~~~g~~~~l~C~~ 74 (151)
..+..+|+|.|+|.|.|..+......+.+.|......... ...+ .+|.+ ...+ ....+.+|+.+.|.|.+
T Consensus 195 ~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~~-~~p~v~~~~p--~~~~~~~G~~v~L~C~~ 271 (475)
T 1iga_A 195 PATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSC-CHPRLSLHRP--ALEDLLLGSEANLTCTL 271 (475)
T ss_pred chhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCCCCC-CCcEEEEcCC--ChHHhccCCceEEEEEE
Confidence 3455678999999999987632233333322100000000 0001 24444 3322 22335789999999999
Q ss_pred cCCCC---CeEEEEeCCeeeEec---------------------c-----c-C------------------C-----CCC
Q psy16421 75 SGSPP---PSIMWRREGGEMITN---------------------S-----F-N------------------N-----TVP 101 (151)
Q Consensus 75 ~g~~~---~~~~W~~~~~~~~~~---------------------~-----~-~------------------~-----~~~ 101 (151)
.|.++ +.+.| . ++..... . + + + ..+
T Consensus 272 ~g~~p~~~~~i~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~ 349 (475)
T 1iga_A 272 TGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPLTATLSKSGNTFR 349 (475)
T ss_pred EcccCCCceEEEE-C-CCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEEcCCCCCceEEEeecCCCCCC
Confidence 88644 68999 4 3322100 0 0 0 1 233
Q ss_pred CeeeeCC-ceeEeecCCcEEEEeeeccc-CC-CeeEEEcCCceecc
Q psy16421 102 PIVKIPS-QLIGAHEGQQLVLECISEAY-PK-SVNYWTREKGDMIA 144 (151)
Q Consensus 102 p~~~~~~-~~~~~~~g~~~~l~C~~~g~-p~-~~~~W~k~~~~~~~ 144 (151)
|.+.+.+ ....+.+|+.+.|.|.+.|. |+ +.|.|+|||..+..
T Consensus 350 P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~ 395 (475)
T 1iga_A 350 PEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPR 395 (475)
T ss_pred CeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCC
Confidence 4443332 22235679999999999996 43 47999999776643
No 89
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.42 E-value=1e-12 Score=84.17 Aligned_cols=94 Identities=21% Similarity=0.436 Sum_probs=65.2
Q ss_pred CCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccC------------------------------
Q psy16421 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFN------------------------------ 97 (151)
Q Consensus 48 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~------------------------------ 97 (151)
+|.|...+ ....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+.....
T Consensus 2 ~~~~~~~~--~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 78 (189)
T 2v5t_A 2 MLTFREVV--SPQEFKQGEDAEVVCRVSSSPAPAVSWLY-HNEEVTTISDNRFAMLANNNLQILNINKSDEGIYRCEGRV 78 (189)
T ss_dssp CCEEEECC--SSEEEETTSCEEECCEEECSSCCEEEEEC------CBCCCTTEEECTTSCEEETTCCGGGCEEEEEEEEE
T ss_pred CceeeccC--CCEEEeCCCcEEEEEEEcCCCCCEEEEEE-CCccceeccCCeEEEecCCCEEEeeCCHhHCcEEEEEEEE
Confidence 45565555 56788999999999999999999999999 4444332100
Q ss_pred --------------CCCCCeeeeCCc--eeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 98 --------------NTVPPIVKIPSQ--LIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 --------------~~~~p~~~~~~~--~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+..+|.+..... ...+.+|+.+.|.|.+.|.|.|.+.|+|+|..+..
T Consensus 79 ~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~ 141 (189)
T 2v5t_A 79 EARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEE 141 (189)
T ss_dssp TTTTEEEEEEEEEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCC
T ss_pred cCCCceEEEEEEEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcC
Confidence 112333333322 34567899999999999999999999999776543
No 90
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.41 E-value=1.7e-12 Score=83.36 Aligned_cols=107 Identities=24% Similarity=0.461 Sum_probs=73.7
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..+......+.|.|. .+|.+...+ ....+.+|+.+.|.|.+.+.|.+
T Consensus 66 i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~-------------~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~ 130 (192)
T 2iep_A 66 ILSVEDSDDGIYCCTANNGVGGAVESCGALQVK-------------MKPKITRPP--INVKIIEGLKAVLPCTTMGNPKP 130 (192)
T ss_dssp ESSCCGGGCEEEEEEEECSSSCCEEEEEEEEEE-------------EEEEEEECC--CCEEEETTSCEEECCEEEEESCC
T ss_pred EcCCCcccCeEEEEEEEcCCCceeEeEEEEEEE-------------eCCccccCC--cceEEeCCCcEEEEEEEeccCCc
Confidence 468899999999999999887544555555554 456666655 46788899999999999999999
Q ss_pred eEEEEeCCeeeEecccC--CCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 81 SIMWRREGGEMITNSFN--NTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
.+.|++ ++..+..... ......+.+. .+...+.....|.+..
T Consensus 131 ~v~W~~-~~~~~~~~~~~~~~~~~~L~i~----~~~~~d~G~Y~C~a~n 174 (192)
T 2iep_A 131 SVSWIK-GDSALRENSRIAVLESGSLRIH----NVQKEDAGQYRCVAKN 174 (192)
T ss_dssp EEEEEE-TTEECCCCSSEEECTTSCEEES----SCCGGGCEEEEEEEEE
T ss_pred eEEEEe-CCEEccCCCcEEEecCCcEEEe----cCChhhCEEEEEEEEc
Confidence 999999 5555443221 0011122222 1334677889999863
No 91
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.41 E-value=6.1e-12 Score=82.79 Aligned_cols=116 Identities=22% Similarity=0.215 Sum_probs=76.6
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccce--eEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSK--LYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSP 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~ 78 (151)
|.+++.+|+|.|+|.+.|..+...+..+.|.|....... ........+|.+...+ ....+.+|+.+.|.|.+.+.|
T Consensus 69 i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~--~~~~v~~G~~v~L~C~~~g~p 146 (218)
T 3k0w_A 69 FNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEP--TSQKLMPGSTLVLQCVAVGSP 146 (218)
T ss_dssp ETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECC--CCEEECTTCCEEEECEEEBSS
T ss_pred EccCChhhCeEeEEEEEcCCCCceeeEEEEEEEccCcccccccccccCCCceEEECC--CceeecCCCcEEEEEEecccC
Confidence 568899999999999999987555666777775211000 0000001235666655 567888999999999999999
Q ss_pred CCeEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 79 PPSIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 79 ~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
.+.+.|++ ++..+... ....+.+.. +...+.....|.+..
T Consensus 147 ~~~v~W~~-~~~~~~~~----~~~~L~i~~----v~~~d~G~Y~C~a~n 186 (218)
T 3k0w_A 147 IPHYQWFK-NELPLTHE----TKKLYMVPY----VDLEHQGTYWCHVYN 186 (218)
T ss_dssp CCEEEEEE-TTEECTTC----CSSEEEESS----CCGGGCEEEEEEEEC
T ss_pred CCeEEEEE-CCEECCCC----CCCEEEEee----cChhcCEEEEEEEEc
Confidence 99999999 56554421 112333322 345667788898764
No 92
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.41 E-value=1.3e-12 Score=85.19 Aligned_cols=95 Identities=25% Similarity=0.575 Sum_probs=71.1
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEeccc------------C-----------------
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSF------------N----------------- 97 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~------------~----------------- 97 (151)
.+|.+...+ ..+.+.+|+.+.|.|.+.+.|.+.+.|++ ++..+.... .
T Consensus 8 ~pp~i~~~p--~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 84 (212)
T 2v9r_A 8 FPPRIVEHP--SDLIVSKGEPATLNCKAEGRPTPTIEWYK-GGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDE 84 (212)
T ss_dssp EEEEEEECC--CCEEECTTCCEEECCEEEEESCCEEEEEE-TTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSC
T ss_pred CCcceecCC--CceEEeCCCcEEEEEEcCCCCCCEEEEEE-CCEEeeccccccccceEEecCCcEEEEEEEecCCCcccC
Confidence 467777766 57889999999999999999999999999 444432110 0
Q ss_pred -----------------------CCCCCeeeeCCceeEeecCCcEEEEeee-cccCCCeeEEEcCCceecc
Q psy16421 98 -----------------------NTVPPIVKIPSQLIGAHEGQQLVLECIS-EAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 -----------------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~~W~k~~~~~~~ 144 (151)
...++.+...+....+.+|+.+.|.|.+ .|.|.|.+.|+|+|..+..
T Consensus 85 G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~ 155 (212)
T 2v9r_A 85 GVYVCVARNYLGEAVSHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDD 155 (212)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECT
T ss_pred eEEEEEEECCCCceeecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCC
Confidence 0112333334556678899999999998 8999999999999776654
No 93
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.40 E-value=3.1e-12 Score=82.26 Aligned_cols=92 Identities=20% Similarity=0.361 Sum_probs=69.6
Q ss_pred CCCeeEeCCCCCceEeec-CCeEEEEeeecCCCC--CeEEEEeCCeeeEecccC--------------------------
Q psy16421 47 MPPDILDYPTSSDIMVRE-GSNVSMRCAASGSPP--PSIMWRREGGEMITNSFN-------------------------- 97 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~-g~~~~l~C~~~g~~~--~~~~W~~~~~~~~~~~~~-------------------------- 97 (151)
.+|.+...+ ...+.+ |+.+.|.|.+.+.+. +.+.|++ ++..+.....
T Consensus 2 ~~P~i~~~~---~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~-~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 77 (190)
T 2wv3_A 2 NEPRIVTSE---EVIIRDSLLPVTLQCNLTSSSHTLMYSYWTK-NGVELTATRKNASNMEYRINKPRAEDSGEYHCVYHF 77 (190)
T ss_dssp -CCEEEECC---CEECCCSSSCEEEEEEEEECSSCEEEEEEEE-TTEECTTCCBCCSEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCcccccc---eEEEccCCceEEEEEEeccCCCCceEEEEEE-CCEECcccceEeccEEEEEecCCcccCEEEEEEEEe
Confidence 356666643 466667 999999999988776 7899999 5555432211
Q ss_pred -----------CCCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEc--CCcee
Q psy16421 98 -----------NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTR--EKGDM 142 (151)
Q Consensus 98 -----------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k--~~~~~ 142 (151)
+..+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+| +|..+
T Consensus 78 ~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~ 135 (190)
T 2wv3_A 78 VSAPKANATIEVKAAPDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFE 135 (190)
T ss_dssp TTEEEEEEEEEEECCCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEE
T ss_pred CCcccccEEEEEecCCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCcee
Confidence 2456777777777789999999999999999999999999 55443
No 94
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.39 E-value=1.7e-13 Score=89.76 Aligned_cols=83 Identities=19% Similarity=0.257 Sum_probs=60.1
Q ss_pred ceEeecCCeEEEEee---ecCCCCCeEEEEeCCeeeEec-------------------------ccC-------------
Q psy16421 59 DIMVREGSNVSMRCA---ASGSPPPSIMWRREGGEMITN-------------------------SFN------------- 97 (151)
Q Consensus 59 ~~~~~~g~~~~l~C~---~~g~~~~~~~W~~~~~~~~~~-------------------------~~~------------- 97 (151)
.+++..|+.+.|.|. +.+.|.+.+.|+| ++..... ...
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 80 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFK-LGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISH 80 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEE-EETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGG
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEE-cCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHH
Confidence 467788999999995 6778999999998 3321100 000
Q ss_pred ----------------------CCCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCcee
Q psy16421 98 ----------------------NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDM 142 (151)
Q Consensus 98 ----------------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~ 142 (151)
+..||.+...+....+.+|+++.|.|.+.|.|.|.++|+++++.+
T Consensus 81 ~G~Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~ 147 (203)
T 4fa8_A 81 DGNYLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVE 147 (203)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC----
T ss_pred CeEEEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeee
Confidence 234566666666777889999999999999999999999876544
No 95
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.39 E-value=3.4e-12 Score=90.37 Aligned_cols=94 Identities=24% Similarity=0.431 Sum_probs=69.4
Q ss_pred CeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCC-eeeEecc-----c--------C-----------------
Q psy16421 49 PDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREG-GEMITNS-----F--------N----------------- 97 (151)
Q Consensus 49 p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~-~~~~~~~-----~--------~----------------- 97 (151)
|.+... ....+.+|+.+.|.|.+.|.|.+.+.|++++ +..+... . .
T Consensus 2 P~i~~~---~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 78 (389)
T 2jll_A 2 PHIIQL---KNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRY 78 (389)
T ss_dssp CEEEEC---CCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEE
T ss_pred CeEEec---CceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEE
Confidence 555552 3567888999999999999999999999951 4443210 0 0
Q ss_pred ------------------CCCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 98 ------------------NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 98 ------------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
+..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+|+|..+...
T Consensus 79 ~C~a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~ 144 (389)
T 2jll_A 79 DCEAASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAK 144 (389)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCT
T ss_pred EEEEEeCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcc
Confidence 223555555555557789999999999999999999999997766543
No 96
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.38 E-value=3e-12 Score=88.04 Aligned_cols=96 Identities=20% Similarity=0.402 Sum_probs=71.3
Q ss_pred CCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecc-----------------------cC-----
Q psy16421 46 SMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNS-----------------------FN----- 97 (151)
Q Consensus 46 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~-----------------------~~----- 97 (151)
..+|.|...+ ....+.+|+.+.|.|.+.|.|.+.+.|++ +++.+... ..
T Consensus 4 ~~~P~~~~~p--~~~~v~~G~~v~l~C~~~g~p~~~i~W~k-~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~ 80 (304)
T 2yd9_A 4 EEPPRFIKEP--KDQIGVSGGVASFVCQATGDPKPRVTWNK-KGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYE 80 (304)
T ss_dssp CCCCEEEECC--CCEEEETTSCEEEEEEEECSSCCEEEEC--------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEE
T ss_pred ccCCeeeecC--CceEecCCCeEEEEEEEEEeCCCeEEEEE-CCEECCCCceEEEEecCCCceEEEEecccccCCCeEEE
Confidence 3678888877 67889999999999999999999999998 44332110 00
Q ss_pred -----------------CC-------CCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 98 -----------------NT-------VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 -----------------~~-------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+. ..|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+..
T Consensus 81 C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~ 151 (304)
T 2yd9_A 81 CVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDP 151 (304)
T ss_dssp EEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCG
T ss_pred EEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcC
Confidence 11 115666667777889999999999999999999999999876543
No 97
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.37 E-value=6e-12 Score=86.39 Aligned_cols=95 Identities=23% Similarity=0.430 Sum_probs=70.1
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEeccc-C----------------------------
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSF-N---------------------------- 97 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~-~---------------------------- 97 (151)
.+|.+...+ ..+.+.+|+.+.|.|.+.|.|.+.+.|++ ++..+.... .
T Consensus 3 ~~P~~~~~p--~~~~v~~G~~v~l~C~~~g~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 79 (305)
T 2nzi_A 3 MAPHFKEEL--RNLNVRYQSNATLVCKVTGHPKPIVKWYR-QGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQV 79 (305)
T ss_dssp CCCEEEECC--CCEEECTTCCEEEEEEEECSSCCEEEEEE-TTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEE
T ss_pred CCCeeeecc--cceEEeCCCcEEEEEEEeCCCCCeEEEEE-CCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEE
Confidence 478887777 57889999999999999999999999999 444432110 0
Q ss_pred ----------------CCCCCeeeeC-----CceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 98 ----------------NTVPPIVKIP-----SQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 ----------------~~~~p~~~~~-----~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+..+|.+... +....+..|+.+.|.|.+.|.|.|.+.|+|++..+..
T Consensus 80 ~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~ 147 (305)
T 2nzi_A 80 RATNQGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDN 147 (305)
T ss_dssp EEEETTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCS
T ss_pred EEEcCCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCC
Confidence 1122222211 2446678899999999999999999999998766543
No 98
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.36 E-value=9.8e-12 Score=79.47 Aligned_cols=85 Identities=24% Similarity=0.401 Sum_probs=67.0
Q ss_pred eEeecCCeEEEEeeecCCCCC--eEEEEeCCeeeEecccC---------------------------------CCCCCee
Q psy16421 60 IMVREGSNVSMRCAASGSPPP--SIMWRREGGEMITNSFN---------------------------------NTVPPIV 104 (151)
Q Consensus 60 ~~~~~g~~~~l~C~~~g~~~~--~~~W~~~~~~~~~~~~~---------------------------------~~~~p~~ 104 (151)
..+.+|+.+.|.|.+.+.+.| .+.|++ ++..+..... +..+|.+
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k-~~~~l~~~~~~~~~~~l~i~~~~d~G~Y~C~~~n~~~~~~~l~V~~~P~~ 86 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLK-GGVVLKEDALPGQKTEFKVDSDDQWGEYSCVFLPEPMGTANIQLHGPPRV 86 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEES-SSEEEECTTCCCSEEEEEECGGGCCEEEEEEEESTTSCEEEEEECCSCCC
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEe-CCEEeecccccCCcEEEEEechhhCeEEEEEEECCcCcEEEEEEecCCce
Confidence 467789999999999887776 899999 5666553321 3456777
Q ss_pred eeCCceeEeecCCcEEEEeeecccC-CCeeEEEc---CCceeccC
Q psy16421 105 KIPSQLIGAHEGQQLVLECISEAYP-KSVNYWTR---EKGDMIAN 145 (151)
Q Consensus 105 ~~~~~~~~~~~g~~~~l~C~~~g~p-~~~~~W~k---~~~~~~~~ 145 (151)
...+....+.+|+.+.|.|.+.|.| .|.+.|+| ++..++.+
T Consensus 87 ~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~ 131 (184)
T 3b5h_A 87 KAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMN 131 (184)
T ss_dssp EESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCT
T ss_pred eecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeec
Confidence 7777777889999999999999999 79999999 66655543
No 99
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.36 E-value=5.9e-12 Score=82.60 Aligned_cols=85 Identities=11% Similarity=0.107 Sum_probs=64.3
Q ss_pred ceEeecCCeEEEEeeec-CCCCCeEEEEeCCeeeEecccC--------------------------------C-------
Q psy16421 59 DIMVREGSNVSMRCAAS-GSPPPSIMWRREGGEMITNSFN--------------------------------N------- 98 (151)
Q Consensus 59 ~~~~~~g~~~~l~C~~~-g~~~~~~~W~~~~~~~~~~~~~--------------------------------~------- 98 (151)
...+.+|+.+.|.|.+. +.|.|.+.|++ +++++....+ +
T Consensus 11 ~~~v~eg~~v~l~c~~~~~~P~p~i~W~k-ng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~Ng~a~~~~ 89 (207)
T 3rbs_A 11 AVEILEKGQVRFWMQAEKLSGNAKVNYIF-NEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHS 89 (207)
T ss_dssp EEEECGGGCEEEEEECSCCCSCCEEEEEE-TTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEETTEEEEE
T ss_pred ceEEEeCCeEEEEEEEecCCCCCEEEEEE-CCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEECCCeEEEE
Confidence 46788999999999985 47999999999 6666632211 0
Q ss_pred -C------------------------CCCeeeeCCceeEeecCCcEEEEeeeccc-CCCeeEEEcCCceeccC
Q psy16421 99 -T------------------------VPPIVKIPSQLIGAHEGQQLVLECISEAY-PKSVNYWTREKGDMIAN 145 (151)
Q Consensus 99 -~------------------------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~~~~W~k~~~~~~~~ 145 (151)
. .+|.|.... ...+.+|+++.|.|.+.|. |.|.++|+|||..+..+
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~ 161 (207)
T 3rbs_A 90 TVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVD 161 (207)
T ss_dssp EEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCC
T ss_pred EEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCC
Confidence 0 134444433 3678899999999999998 99999999998877553
No 100
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.36 E-value=7.6e-13 Score=92.99 Aligned_cols=112 Identities=17% Similarity=0.192 Sum_probs=77.3
Q ss_pred CCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeC
Q psy16421 8 HMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRRE 87 (151)
Q Consensus 8 d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~ 87 (151)
|.|.|+|.+.+... .+. +....+|.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|+++
T Consensus 136 ~~~~~~C~~~~~l~-----~l~-------------~~~c~~P~i~~~~--~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~ 195 (347)
T 2ifg_A 136 PEQKLQCHGQGPLA-----HMP-------------NASCGVPTLKVQV--PNASVDVGDDVLLRCQVEGRGLEQAGWILT 195 (347)
T ss_dssp GGGCCCCSSSSCSS-----CCC-------------CTTCCCCEEEEEC--CSSCCBTTCCEEEEEEEECSSCCCCCEEES
T ss_pred cccCCCCCCChHHh-----cCC-------------cccCCCCceeccC--CceEEeCCCcEEEEEEEecCCCCEEEEEcC
Confidence 57899998766221 111 1223578887766 567889999999999999999999999995
Q ss_pred CeeeEecccC-----------------------------------------CCCCCeeeeCCceeEeecCCcEEEEeeec
Q psy16421 88 GGEMITNSFN-----------------------------------------NTVPPIVKIPSQLIGAHEGQQLVLECISE 126 (151)
Q Consensus 88 ~~~~~~~~~~-----------------------------------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 126 (151)
++........ +..+|.+ ......+|+.+.|.|.+.
T Consensus 196 ~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~~P~i----~~~~~~~g~~v~l~C~~~ 271 (347)
T 2ifg_A 196 ELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSFPASV----QLHTAVEMHHWCIPFSVD 271 (347)
T ss_dssp CCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBEEEEE----EECCCEESSSEEEEEEEE
T ss_pred CceeecccccceecccceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcCCCee----eeccCccCceEEEEEEee
Confidence 4332111000 1112222 122356799999999999
Q ss_pred ccCCCeeEEEcCCceec
Q psy16421 127 AYPKSVNYWTREKGDMI 143 (151)
Q Consensus 127 g~p~~~~~W~k~~~~~~ 143 (151)
|.|.|.+.|+|+|..+.
T Consensus 272 g~P~p~i~W~~~g~~l~ 288 (347)
T 2ifg_A 272 GQPAPSLRWLFNGSVLN 288 (347)
T ss_dssp EESCCEEEEEETTEECC
T ss_pred ecCCCcEEEEeCCEECC
Confidence 99999999999977665
No 101
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.36 E-value=1.7e-12 Score=83.48 Aligned_cols=109 Identities=21% Similarity=0.365 Sum_probs=73.9
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..+ .....+.|.|.. ...+|.+...+ ....+.+|+.+.|.|.+.+.|.+
T Consensus 67 i~~~~~~d~G~Y~C~~~n~~~-~~~~~~~l~v~~----------~~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~ 133 (194)
T 2a38_A 67 IPAVTKANSGRYSLKATNGSG-QATSTAELLVKA----------ETAPPNFVQRL--QSMTVRQGSQVRLQVRVTGIPTP 133 (194)
T ss_dssp ESSCCGGGCEEEEEEEEETTE-EEEEEEEEEEEC----------CCEEEEEEECC--CCEEECTTEEEEEEEEEEEESCC
T ss_pred ECCCCcccCEEEEEEEEcCCc-eEeEEEEEEEcc----------CCCCCEEEeCC--ccEEEcCCCEEEEEEEEEEecCC
Confidence 468899999999999999877 444555565531 12456666555 46778899999999999999999
Q ss_pred eEEEEeCCeeeEecccCCCCCCeeeeC-----CceeEeecCCcEEEEeeecc
Q psy16421 81 SIMWRREGGEMITNSFNNTVPPIVKIP-----SQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~~~g~~~~l~C~~~g 127 (151)
.+.|++ ++..+..... ..+... .....+...+.....|.+..
T Consensus 134 ~v~W~~-~~~~~~~~~~----~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 180 (194)
T 2a38_A 134 VVKFYR-DGAEIQSSLD----FQISQEGDLYSLLIAEAYPEDSGTYSVNATN 180 (194)
T ss_dssp EEEEEE-TTEECCCSSS----EEEEEETTEEEEEEEEECGGGCEEEEEEEEE
T ss_pred eEEEEE-CCEECCCCCc----EEEEEcCCEEEEEECCCChhcCeEEEEEEEe
Confidence 999999 5665542211 111111 11123455777889999864
No 102
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.35 E-value=3.5e-12 Score=83.75 Aligned_cols=110 Identities=16% Similarity=0.292 Sum_probs=66.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.| .+ .....+.|.|. .++...... ....+.+|+.+.|.|.+.|.|.|
T Consensus 84 I~~v~~~D~G~Y~C~~~~-~~-~~~~~~~l~V~-------------~~~~~~~~~--~~~~~~~g~~v~L~C~~~g~P~p 146 (222)
T 3sbw_C 84 ITDVKLQDAGVYRCMISY-GG-ADYKRITVKVN-------------APYNKINQR--ILVVDPVTSEHELTCQAEGYPKA 146 (222)
T ss_dssp ESSCCGGGCEEEEEEEES-SS-EEEEEEEEEEE-------------BCCCCCEEE--EEEEETTTTEEEEEEEEEEBSCC
T ss_pred EcCcccccCeEEEEEEEe-CC-CceeEEEEEEE-------------CCCCCCCce--eeeeecCCCcEEEEEEecCCCCC
Confidence 578999999999999999 34 44455666664 222211100 01245679999999999999999
Q ss_pred eEEEEeCCeeeEecccC---CCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 81 SIMWRREGGEMITNSFN---NTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
.+.|++++++.+..... ...............+...+....+|.+..
T Consensus 147 ~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~v~~~d~g~Y~C~a~n 196 (222)
T 3sbw_C 147 EVIWTSSDHQVLSGKTTTTNSKREEKLFNVTSTLRINTTTNEIFYCTFRR 196 (222)
T ss_dssp EEEEEETTCCEECCEEEEEECC----CEEEEEEEEEECCTTCEEEEEEEE
T ss_pred eEEEEECCCceecCccceEEEcCCCCCEEEEEEEEEeccCCcEEEEEEEe
Confidence 99999964665542211 000000000011122445667789999864
No 103
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.35 E-value=5.4e-12 Score=80.93 Aligned_cols=90 Identities=29% Similarity=0.427 Sum_probs=64.5
Q ss_pred CCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccC------------------------------
Q psy16421 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFN------------------------------ 97 (151)
Q Consensus 48 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~------------------------------ 97 (151)
||.+.....+..+.+.+|+.+.|.|.+.+.|.+.+.|++ +++.+....+
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 80 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFR-NGKLIEENEKYILKGSNTELTVRNIINSDGGPYVCRATNK 80 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEE-TTEECCCSSSEEEETTTTEEEECSCCGGGCEEEEEEEEET
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEE-CCeEcCCCccEEEeCCeeEEEEecCChhcCcEEEEEEEcc
Confidence 455555443245677889999999999999999999999 5555443211
Q ss_pred -----------CCCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCC
Q psy16421 98 -----------NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREK 139 (151)
Q Consensus 98 -----------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~ 139 (151)
+..+|.+.... ...+.+|+.+.|.|.+.|.|.|.+.|+|++
T Consensus 81 ~~~~~~~~~l~V~~~p~~~~~~-~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~ 132 (192)
T 2va4_A 81 AGEDEKQAFLQVFVQPHIIQLK-NETTYENGQVTLVCDAEGEPIPEITWKRAV 132 (192)
T ss_dssp TEEEEEEEEEEEEEEEEEEEEC-CEEECTTSEEEEEEEEEEESCCEEEEEETT
T ss_pred ccccceEEEEEEEccCcccccC-cceEEeCCeEEEEEEecCCCCCcEEEEeCC
Confidence 12233333322 345678999999999999999999999983
No 104
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.35 E-value=5.6e-12 Score=82.47 Aligned_cols=114 Identities=26% Similarity=0.396 Sum_probs=75.9
Q ss_pred Cccccc-cCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSR-EHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~-~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++. +|+|.|+|.+.|..+...+..+.|.|...... ....|.+...+ ....+.+|+.+.|.|.+.|.|.
T Consensus 68 i~~v~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~~~~~------~~~~p~~~~~~--~~~~~~~g~~v~l~C~~~g~p~ 139 (212)
T 2yd1_A 68 IEPVRAGRDDAPYECVAENGVGDAVSADATLTIYEGDKT------PAGFPVITQGP--GTRVIEVGHTVLMTCKAIGNPT 139 (212)
T ss_dssp ESSCCTTTTCSEEEEEEECSSSCEEEEEEEEEEECTTCS------CTTCCEEEECC--CCEEEETTCCEEECCEEECSSC
T ss_pred EEecCCCCcCceEEEEEEeCCCCeEEeeEEEEEecccCC------CCCCCeeEeCC--CceEeecCCeEEEEEEeccCCC
Confidence 467888 99999999999998843666777777521100 01236676665 5677889999999999999999
Q ss_pred CeEEEEeCCeeeEecccCCC--CCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGEMITNSFNNT--VPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~~~--~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
+.+.|++ ++..+....... ..-.+.+. .+...+.....|.+..
T Consensus 140 p~i~W~~-~~~~~~~~~~~~~~~~~~L~i~----~v~~~d~G~Y~C~a~N 184 (212)
T 2yd1_A 140 PNIYWIK-NQTKVDMSNPRYSLKDGFLQIE----NSREEDQGKYECVAEN 184 (212)
T ss_dssp CEEEEEE-TTEECCTTSTTEEEETTEEEEC----SCCGGGCEEEEEEEEE
T ss_pred CeEEEEE-CCeEcccCCCeEEccCCeEEEc----cCChhhCEEEEEEeec
Confidence 9999999 555554321100 00122221 2345677799999863
No 105
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.35 E-value=8e-12 Score=91.13 Aligned_cols=76 Identities=20% Similarity=0.413 Sum_probs=50.3
Q ss_pred CccccccCCeEEEEEEEcCCCC-----CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeec
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP-----SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAAS 75 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~-----~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~ 75 (151)
|.+++.+|+|.|.|.+.+..+. .....+.|.|.. ....+|.+.... ...+.+|+.+.|.|.+.
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~---------~~~~~P~i~~~~---~~~~~~g~~v~L~C~~~ 151 (475)
T 1iga_A 84 LSSLRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSS---------ASPTSPKVFPLS---LCSTQPDGNVVIACLVQ 151 (475)
T ss_pred ECCCChhhCEEEEEEEeccCCCccceeeecCceEEEecc---------CCCcCCeEEecC---ccccCCCCeEEEEEEEe
Confidence 6789999999999999997652 122344565531 111345444332 11236899999999998
Q ss_pred CC-CC-C-eEEEEeCC
Q psy16421 76 GS-PP-P-SIMWRREG 88 (151)
Q Consensus 76 g~-~~-~-~~~W~~~~ 88 (151)
|. |. + .+.|++++
T Consensus 152 g~~P~~p~~v~W~~~~ 167 (475)
T 1iga_A 152 GFFPQEPLSVTWSESG 167 (475)
T ss_pred eecCCCceEEEEcCCC
Confidence 86 55 4 99999843
No 106
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.34 E-value=6.3e-12 Score=82.29 Aligned_cols=113 Identities=27% Similarity=0.346 Sum_probs=73.0
Q ss_pred Cccc-cccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEV-SREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v-~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.++ +.+|+|.|+|.+.|..+ .....+.|.|..... .....|.+...+ ....+.+|+.+.|.|.+.|.|.
T Consensus 67 i~~v~~~~d~G~Y~C~a~n~~g-~~~~~~~l~V~~~~~------~~~~~p~~~~~~--~~~~~~~g~~v~l~C~~~g~p~ 137 (212)
T 2yd6_A 67 IQPLRTPRDEAIYECVASNNVG-EISVSTRLTVLREDQ------IPRGFPTIDMGP--QLKVVERTRTATMLCAASGNPD 137 (212)
T ss_dssp ECSCCTTTTCEEEEEEEEETTE-EEEEEEEEEEECGGG------CCTTCCEEEECC--CCEEEETTSCEEEEEEEECSSC
T ss_pred EeccCCCCCCeEEEEEEEcCCC-cEEEEEEEEEeccCc------cCCCcceeecCC--cceeEecCCCEEEEEEecCCCC
Confidence 4567 59999999999999987 455666777642110 001236666655 4567888999999999999999
Q ss_pred CeEEEEeCCeeeEecccC-CCC-------CCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGEMITNSFN-NTV-------PPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~-~~~-------~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
+.+.|++ ++..+..... ... ...+.+. .+...+.....|.+..
T Consensus 138 p~v~W~~-~g~~l~~~~~~~~~~~~~~~~~~~L~i~----~~~~~d~G~Y~C~a~N 188 (212)
T 2yd6_A 138 PEITWFK-DFLPVDTSNNNGRIKQLRSESIGALQIE----QSEESDQGKYECVATN 188 (212)
T ss_dssp CEEEEEE-TTEEC------CCEEEEEETTEEEEEEC----SCCGGGCEEEEEEEEE
T ss_pred CeEEEEE-CCccccCcCCCceEEEEecCCeEEEEEc----CCCcccCEEEEEEEEC
Confidence 9999999 5665543210 000 0111111 2345677889999763
No 107
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.34 E-value=1.2e-11 Score=81.19 Aligned_cols=116 Identities=16% Similarity=0.281 Sum_probs=70.2
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccce---eEEee-----cCCCCeeEeCCCCCceEeecCCeEEEEe
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSK---LYIYT-----SSMPPDILDYPTSSDIMVREGSNVSMRC 72 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~---~~~~~-----~~~~p~~~~~~~~~~~~~~~g~~~~l~C 72 (151)
|.+++++|+|.|+|.|.|+. ......+.+....... ...+. ...+|.|...+ ...+.+|+.+.|.|
T Consensus 65 I~~v~~~D~G~Y~C~a~Ng~---a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~---~~~v~~g~~v~l~C 138 (207)
T 3rbs_A 65 MEKLQDEDEGTYTFQLQDGK---ATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL---SWEVTGECNVLLKC 138 (207)
T ss_dssp ESCCCGGGCEEEEEEEEETT---EEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE---EEEEETTTEEEEEE
T ss_pred ECCCChhhCEEEEEEEECCC---eEEEEEEEEEccchhhhcccccccccccccCCCCceEecC---CcEEcCCCcEEEEE
Confidence 57889999999999999932 2233333221000000 00000 01367776644 36788999999999
Q ss_pred eecCC-CCCeEEEEeCCeeeEecccCCCCCC---eeeeCCceeEeecCCcEEEEeeecc
Q psy16421 73 AASGS-PPPSIMWRREGGEMITNSFNNTVPP---IVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 73 ~~~g~-~~~~~~W~~~~~~~~~~~~~~~~~p---~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
.+.|. |.|.+.|++ +++.+....+..... .+.+. .+...+....+|.+..
T Consensus 139 ~v~g~~P~p~i~W~k-~g~~l~~~~~~~~~~~~~~L~I~----~v~~~D~G~Y~C~a~N 192 (207)
T 3rbs_A 139 KVANIKKETHIVWYK-DEREISVDEKHDFKDGICTLLIT----EFSKKDAGIYEVILKD 192 (207)
T ss_dssp EEESCCTTCEEEEEE-TTEEECCCCCCCCSSEEEEEEET----TCCGGGCEEEEEEEEE
T ss_pred EEeCCCCCCEEEEEE-CCEECCCCCceEcCCCEEEEEEC----CCCcccCEEEEEEEEc
Confidence 99998 899999999 677765432111110 12221 2456788899998864
No 108
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.34 E-value=2.5e-11 Score=77.94 Aligned_cols=109 Identities=17% Similarity=0.232 Sum_probs=71.2
Q ss_pred CccccccCCeEEEEEEEcCCCC-CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP-SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++++|+|.|+|.+.|..+. ..+..+.|.|. ....+|.+...+ ...+.+|+.+.|.|.+.+. +
T Consensus 56 i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~----------~~~~~p~i~~~p---~~~v~~G~~v~l~C~~~~~-~ 121 (184)
T 2gi7_A 56 IPAMKRSLAGRYRCSYQNGSLWSLPSDQLELVAT----------GVFAKPSLSAQP---GPAVSSGGDVTLQCQTRYG-F 121 (184)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEE----------SSSCCCEEEEEC---CCSSCCTTCEEEEEECSSC-C
T ss_pred ECcCChhhCceEEEEEEcCCCccCCCCCEEEEec----------CcCCCCEEEeCC---CceecCCCcEEEEEEcCCC-C
Confidence 5689999999999999998752 34555666663 112456665544 2456789999999998775 4
Q ss_pred CeEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
+.+.|++ ++..+.... .............+...+.....|.+..
T Consensus 122 ~~~~w~k-~g~~~~~~~---~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 165 (184)
T 2gi7_A 122 DQFALYK-EGDPAPYKN---PERWYRASFPIITVTAAHSGTYRCYSFS 165 (184)
T ss_dssp CEEEEEE-CCCCTTSCC---CCEEEEESSSEEEETTCCSEEEEEEEEC
T ss_pred cEEEEEE-CCCcCccee---cCCCceEEEEEccCCccCCeEEEEEEEe
Confidence 6999999 554432100 0000111223335667888999999865
No 109
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.33 E-value=6.7e-12 Score=88.90 Aligned_cols=76 Identities=24% Similarity=0.515 Sum_probs=59.9
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++++|+|.|+|.|.|..| ..+..+.|.|. .+|.+...+ ....+.+|+.+.|.|.+.|.|.+
T Consensus 67 i~~v~~~D~G~Y~C~a~n~~g-~~~~~~~l~V~-------------~~P~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~ 130 (389)
T 2jll_A 67 IKDVKLSDSGRYDCEAASRIG-GHQKSMYLDIE-------------YAPKFISNQ--TIYYSWEGNPINISCDVKSNPPA 130 (389)
T ss_dssp EESCCGGGCEEEEEEEECSSC-EEEEEEEEEEE-------------EEEEECCSC--CEEEECTTCCEEEEECEEEESCC
T ss_pred EcccChhhCEEEEEEEEeCCC-CcceEEEEEEE-------------eCCEEecCc--ceEEeccCCEEEEEEEEEecCCC
Confidence 568899999999999999988 45666676664 456665543 33467889999999999999999
Q ss_pred eEEEEeCCeeeEe
Q psy16421 81 SIMWRREGGEMIT 93 (151)
Q Consensus 81 ~~~W~~~~~~~~~ 93 (151)
.+.|++ +++.+.
T Consensus 131 ~i~W~~-~g~~l~ 142 (389)
T 2jll_A 131 SIHWRR-DKLVLP 142 (389)
T ss_dssp EEEEEE-TTEESS
T ss_pred eEEEEE-CCccCC
Confidence 999999 565554
No 110
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.33 E-value=2.7e-11 Score=78.50 Aligned_cols=110 Identities=16% Similarity=0.307 Sum_probs=66.4
Q ss_pred CccccccCCeEEEEEEEcCCCCCC----ccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeee-c
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSV----SKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA-S 75 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~----~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~ 75 (151)
|.+++.+|+|.|+|.+.|..+... ...+.|.|... ...|.+... ....|+.+.|.|.+ .
T Consensus 69 I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~----------~~~p~~~~~------~~~~g~~~~l~C~~~~ 132 (201)
T 1dr9_A 69 ILALRPSDEGTYECVVLKYEKDAFKREHLAEVTLSVKAD----------FPTPSISDF------EIPTSNIRRIICSTSG 132 (201)
T ss_dssp ECSCCGGGCEEEEEEEEECCTTSCEEEEEEEEEEEEECC----------CCCCEEEEE------ECSSTTEEEEEEEEEE
T ss_pred EecccchhCeEEEEEEEcCCCCccccccccEEEEEEcCC----------CCCCceEec------cCCCCCeEEEEEecCC
Confidence 578999999999999999876433 23455555311 122333221 12348899999999 4
Q ss_pred CCCCCeEEEEeCCeeeEecccC--CCCCC-eeeeCCceeEeecCCcEEEEeeecc
Q psy16421 76 GSPPPSIMWRREGGEMITNSFN--NTVPP-IVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 76 g~~~~~~~W~~~~~~~~~~~~~--~~~~p-~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
|.|.|.+.|++ +++.+..... ..... .+........+...+....+|.+..
T Consensus 133 g~P~p~i~W~k-~g~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~d~g~Y~C~a~n 186 (201)
T 1dr9_A 133 GFPEPHLSWLE-NGEELNAINTTVSQDPETELYAVSSKLDFNMTTNHSFMCLIKY 186 (201)
T ss_dssp ESSCEEEEEEE-SSCEECCSEEEEEECTTTCCEEEEEEEEEETTSCEEEEEEEEE
T ss_pred ccCCCEEEEEE-CCEECccccceEEecCCCcEEEEEEEEEEEecCCCEEEEEEec
Confidence 89999999999 5666553211 00000 0000001223445678899999873
No 111
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.33 E-value=3.2e-11 Score=76.71 Aligned_cols=92 Identities=15% Similarity=0.159 Sum_probs=65.7
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCe-EEEEeCCeeeEecccC----------------------------
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPS-IMWRREGGEMITNSFN---------------------------- 97 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~-~~W~~~~~~~~~~~~~---------------------------- 97 (151)
.+|.+...+ ....+.+|+++.|.|.+.+.+.+. +.|++ ++..+.....
T Consensus 6 ~~p~i~~~p--~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~-~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~s~~~ 82 (175)
T 1fnl_A 6 PKAVVFLEP--QWYSVLEKDSVTLKCQGAYSPEDNSTQWFH-NESLISSQASSYFIDAATVNDSGEYRCQTNLSTLSDPV 82 (175)
T ss_dssp CCCEEEEES--CCSEEETTCCEEEEEECCCBTTBCCCEEEE-TTEEEESSCSEEEESSCCGGGCEEEEEECSSSCCCCCE
T ss_pred CCCEEEEcC--CceeeeCCCcEEEEeeCCCCCCCcceEEEE-CCEEccCCceEEEEeCCCcccCEEEEEEeeCCcccccE
Confidence 467776666 456889999999999999887665 78999 5655543321
Q ss_pred ---CCCCCeeeeCCceeEeecCCcEEEEeeecccCCC-eeEEEcCCcee
Q psy16421 98 ---NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKS-VNYWTREKGDM 142 (151)
Q Consensus 98 ---~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~~~W~k~~~~~ 142 (151)
+..++.+.. .....+.+|+.+.|.|.+.+.|++ .+.|+|+|..+
T Consensus 83 ~l~V~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~ 130 (175)
T 1fnl_A 83 QLEVHIGWLLLQ-APRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDR 130 (175)
T ss_dssp EEEEECSSEEEE-CSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEE
T ss_pred EEEEeCCCceee-CCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEc
Confidence 111222222 233567899999999999987665 89999998765
No 112
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.32 E-value=2.6e-11 Score=79.28 Aligned_cols=92 Identities=14% Similarity=0.153 Sum_probs=66.3
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCe-EEEEeCCeeeEecccC----------------------------
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPS-IMWRREGGEMITNSFN---------------------------- 97 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~-~~W~~~~~~~~~~~~~---------------------------- 97 (151)
.+|.+...+ ....+.+|+++.|.|.+.+.+.+. +.|++ +++.+.....
T Consensus 6 p~p~i~~~p--~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k-~g~~l~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~s~~~ 82 (204)
T 3sgj_C 6 PKAVVFLEP--QWYRVLEKDSVTLKCQGAYSPEDQSTQWFH-NESLISSQASSYFIDAATVDDSGEYRCQTQLSTLSDPV 82 (204)
T ss_dssp CBCEEEEES--CCSEEETTCCEEEEEECCSSSSCCCEEEEE-TTEEESCCSSEEEESSCCGGGCEEEEEEETTSBCCCCE
T ss_pred CCCeEEEcC--CCeEEECCCCEEEEEcCCCCCCCcEEEEEE-CCEEcccCccEEEEecccccCCEEEEEEeCCCcccccE
Confidence 456666655 446888999999999999988765 99999 5665543321
Q ss_pred ---CCCCCeeeeCCceeEeecCCcEEEEeeeccc-CCCeeEEEcCCcee
Q psy16421 98 ---NTVPPIVKIPSQLIGAHEGQQLVLECISEAY-PKSVNYWTREKGDM 142 (151)
Q Consensus 98 ---~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~~~~W~k~~~~~ 142 (151)
+..+|.+...+. ..+.+|+++.|.|.+.+. |.+.+.|+|+|..+
T Consensus 83 ~l~V~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~ 130 (204)
T 3sgj_C 83 QLEVHIGWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGR 130 (204)
T ss_dssp EEEEECSSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEE
T ss_pred EEEEecCceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEe
Confidence 122344433333 567899999999999765 55789999998765
No 113
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.32 E-value=2.1e-11 Score=77.88 Aligned_cols=96 Identities=15% Similarity=0.194 Sum_probs=65.5
Q ss_pred CccccccCCeEEEEEEEcCCCCC-CccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPS-VSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++.+|+|.|+|.+.|..|.. ....+.|.|.. ....|.+ ...+..+.|.|.+.|.|.
T Consensus 65 I~~v~~~D~G~Y~C~~~n~~g~~~~~~~~~l~V~~----------~~~~p~i----------~~~~~~v~L~C~~~g~p~ 124 (176)
T 1hng_A 65 IKNLTRDDSGTYNVTVYSTNGTRILNKALDLRILE----------MVSKPMI----------YWECSNATLTCEVLEGTD 124 (176)
T ss_dssp ESSCCGGGCEEEEEEEEETTCCEEEEEEEEEEEEC----------CCCCCEE----------EEETTTTEEEEECSSCSS
T ss_pred EcccccccCEEEEEEEEeCCCCEEEEEEEEEEEeC----------CCCCCEE----------EecCCcEEEEEEecCCCC
Confidence 57899999999999999998843 24455665531 0112222 223456999999999999
Q ss_pred CeEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
|.+.|++ +++.+..... ..+. .+...+.....|.+..
T Consensus 125 p~i~W~~-~g~~l~~~~~----~~i~------~~~~~d~G~Y~C~a~N 161 (176)
T 1hng_A 125 VELKLYQ-GKEHLRSLRQ----KTMS------YQWTNLRAPFKCKAVN 161 (176)
T ss_dssp CEEEEEE-TTEEEEEESS----SEEE------EECSCCSSCEEEEEEE
T ss_pred cEEEEEE-CCEECCCCCc----EEEE------EEEccCCeEEEEEEEe
Confidence 9999999 6777654321 1222 3457788889999864
No 114
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.31 E-value=7e-12 Score=81.19 Aligned_cols=108 Identities=16% Similarity=0.262 Sum_probs=61.9
Q ss_pred CccccccCCeEEEEEEEcCCCC-CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP-SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++.+|+|.|+|.+.|..+. ..+..+.|.|.. ...+|.+...+ ...+.+|+.+.|.|.+.+.|
T Consensus 62 i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~~----------~~~~p~i~~~~---~~~v~~G~~v~L~C~~~~~p- 127 (196)
T 2d3v_A 62 IPSMTEHHAGRYRCYYYSPAGWSEPSDPLELVVTG----------FYNKPTLSALP---SPVVTSGENVTLQCGSRLRF- 127 (196)
T ss_dssp ESSCCGGGCEEEEEEEEETTEECBCCCCEEEEEEC----------SSCCCEEEC--------------CEEEEEESSCC-
T ss_pred eccCChhHCeEEEEEEeCCCCcCCcCccEEEEecC----------CCCCCeEEccC---CccccCCCcEEEEEEcCCCC-
Confidence 5689999999999999998763 235566776641 12356665443 24678899999999999988
Q ss_pred CeEEEEeCCeeeEecccC----CC-C--CCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGEMITNSFN----NT-V--PPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~----~~-~--~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
+.+.|++ +++.+..... .. . ...+.+. .+...+.....|.+..
T Consensus 128 ~~~~W~k-~g~~~~~~~~~~~~~~~~~~~~~L~I~----~v~~~D~G~Y~C~a~n 177 (196)
T 2d3v_A 128 DRFILTE-EGDHKLSWTLDSQLTPSGQFQALFPVG----PVTPSHRWMLRCYGSR 177 (196)
T ss_dssp SEEEEEE-C---CCEEEEECEECTTSCEEEEEECC----CCBTTBCEEEEEEEEE
T ss_pred CEEEEEc-cCCcccccccccccccCCCceeEEEee----ecCcccCeeEEEEEEc
Confidence 8999999 5544321100 00 0 0122221 2456788899999864
No 115
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.31 E-value=3.3e-12 Score=83.50 Aligned_cols=80 Identities=19% Similarity=0.407 Sum_probs=57.9
Q ss_pred CccccccCCeEEEEEEEcCCCC--CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-C
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP--SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-S 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~ 77 (151)
|.+++.+|+|.|+|.+.|..+. .......|.|. ....+|.+...+ ....+.+|+.+.|.|.+.+ .
T Consensus 75 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~----------~~~~~p~v~~~~--~~~~~~~g~~v~l~C~~~g~~ 142 (213)
T 3nl4_L 75 ISDLECADAATYYCQSTYENPTYVSFGGGTEVGVK----------GDPVAPTVLIFP--PSADLVATGTVTIVCVANKYF 142 (213)
T ss_dssp ECSCCGGGCEEEEEEECCSSTTTCEECCCEEEEEE----------CCCBCCEEEEEC--CCHHHHTTSEEEEEEEEEEEB
T ss_pred ECCCChHHCEEEEEecCCCCceeEEeCCCeEEEEe----------CCCcCCeEEEeC--CchhhccCCcEeEEEEEeccc
Confidence 5789999999999999998763 23444566663 123566665533 2334567999999999988 8
Q ss_pred CCCeEEEEeCCeeeEe
Q psy16421 78 PPPSIMWRREGGEMIT 93 (151)
Q Consensus 78 ~~~~~~W~~~~~~~~~ 93 (151)
|.+.+.|++ +++.+.
T Consensus 143 P~~~v~W~k-~g~~~~ 157 (213)
T 3nl4_L 143 PDVTVTWEV-DGTTQT 157 (213)
T ss_dssp SCCEEEEEE-TTEECC
T ss_pred CCcEEEEEe-CCccCC
Confidence 999999999 565553
No 116
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.31 E-value=8e-12 Score=79.94 Aligned_cols=109 Identities=22% Similarity=0.401 Sum_probs=68.6
Q ss_pred CccccccCCeEEEEEEEcCCCCC-CccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPS-VSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++.+|+|.|+|.+.+..+.. ....+.+.+. .+|.+..........+.+|+.+.|.|.+.+.|.
T Consensus 61 i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~l~v~-------------~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~ 127 (189)
T 2v5t_A 61 ILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVN-------------VPPAISMPQKSFNATAERGEEMTFSCRASGSPE 127 (189)
T ss_dssp ETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEE-------------EEEEEECSCCEEEEETTSCCCEEEECEEEEESC
T ss_pred EeeCCHhHCcEEEEEEEEcCCCceEEEEEEEEec-------------CCCCcccccccccccccCCCcEEEEEEEccCCC
Confidence 56889999999999999987532 1233334332 345554433212345678999999999999999
Q ss_pred CeEEEEeCCeeeEecccCC---CCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGEMITNSFNN---TVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~~---~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
+.+.|++ ++..+...... .....+.+. .+...+.....|.+..
T Consensus 128 ~~v~W~~-~g~~~~~~~~~~~~~~~~~L~i~----~~~~~d~G~Y~C~a~n 173 (189)
T 2v5t_A 128 PAISWFR-NGKLIEENEKYILKGSNTELTVR----NIINSDGGPYVCRATN 173 (189)
T ss_dssp CEEEEEE-TTEECCCSSSEEEETTTTEEEEC----SCCGGGCEEEEEEEEE
T ss_pred CeEEEEE-CCEECcCCCcEEEecCCCEEEEc----CCChhhCeeEEEEEEe
Confidence 9999999 56655432210 001122222 1335667889999864
No 117
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.31 E-value=8.8e-12 Score=84.95 Aligned_cols=95 Identities=17% Similarity=0.235 Sum_probs=68.3
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccC-----------------------------
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFN----------------------------- 97 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~----------------------------- 97 (151)
.+|.+...+ ....+.+|+.+.|.|.+.+.|. .+.|++.++..+....+
T Consensus 3 ~~p~v~~~~--~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~ 79 (291)
T 2wim_A 3 ALLQVTISL--SKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQA 79 (291)
T ss_dssp CCCEEEESC--SEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCceEEEec--cceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEE
Confidence 456777766 6788999999999999998764 89999855544322111
Q ss_pred ---------------CCCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 98 ---------------NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 ---------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+..+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+..
T Consensus 80 ~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~ 141 (291)
T 2wim_A 80 TDAKGQTQEATVVLEIYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTT 141 (291)
T ss_dssp ECSSSCEEEEEEEEEEECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CB
T ss_pred ecccCceEEEEEEEEecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccc
Confidence 12344444455666789999999999999999999999999876654
No 118
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.30 E-value=8.5e-12 Score=81.17 Aligned_cols=107 Identities=17% Similarity=0.373 Sum_probs=68.6
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeee-cCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA-SGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~~~ 79 (151)
|.+++.+|+|.|+|.+.|..+ .....+.|.|. .+|.+...+ ....+.+|+.+.|.|.+ .+.|.
T Consensus 88 i~~v~~~D~G~Y~C~~~~~~~-~~~~~~~l~V~-------------~~p~~~~~~--~~~~~~~g~~v~l~C~~~~g~p~ 151 (214)
T 3jz7_A 88 VTNLQLSDIGTYQCKVKKAPG-VANKKFLLTVL-------------VKPSGTRCF--VDGSEEIGNDFKLKCEPKEGSLP 151 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTE-EEEEEEEEEEE-------------CCCBSCEEE--EESCCBTTCCEEEEEECSBCCSS
T ss_pred EccCChhhCeEEEEEEEeCCC-ccccEEEEEEE-------------cCCCCceee--eecceecCCcEEEEecCCCCCCC
Confidence 568999999999999999877 44556666664 344432222 12336789999999999 89999
Q ss_pred CeEEEEeCCee-eEecccC-CCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGE-MITNSFN-NTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~-~~~~~~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
+.+.|+++++. .+..... ......+.+.. +...+.....|.+..
T Consensus 152 ~~v~W~~~~~~~~~~~~~~~~~~~~~L~i~~----~~~~d~G~Y~C~a~N 197 (214)
T 3jz7_A 152 LQFEWQKLSDSQTMPTPWLAEMTSPVISVKN----ASSEYSGTYSCTVQN 197 (214)
T ss_dssp CEEEEEECSTTCCCCGGGGGGTTSSEEEECS----CCGGGCEEEEEEEEC
T ss_pred CEEEEEECCCCCccCccceeccCCCEEEEec----CCHHHCEEEEEEEEc
Confidence 99999994332 2211110 01111333322 345677889999864
No 119
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.29 E-value=1e-11 Score=80.10 Aligned_cols=85 Identities=20% Similarity=0.292 Sum_probs=64.3
Q ss_pred CceEeecCCeEEEEee-ecCCCC-CeEEEEeCCeeeEecc--c--------C----------------------------
Q psy16421 58 SDIMVREGSNVSMRCA-ASGSPP-PSIMWRREGGEMITNS--F--------N---------------------------- 97 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~-~~g~~~-~~~~W~~~~~~~~~~~--~--------~---------------------------- 97 (151)
..+.+.+|+.+.|.|. +.+.|. +.+.|+++ +..+... . .
T Consensus 16 ~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~ 94 (201)
T 3s97_C 16 PEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLN-EFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSV 94 (201)
T ss_dssp CCEEEETTCCEEECCCCCSEESSCCEEEEEES-STTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEE
T ss_pred ceEEEECCCCEEEeccccccCCCceEEEEEEC-CceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcch
Confidence 5678899999999999 888888 99999994 4333210 0 0
Q ss_pred ---------------CCCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceec
Q psy16421 98 ---------------NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMI 143 (151)
Q Consensus 98 ---------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~ 143 (151)
...+|.+........+.+|+.+.|.|.+.|.|.|.+.|++++..+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~ 155 (201)
T 3s97_C 95 FSKFIPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMP 155 (201)
T ss_dssp ECCCEEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCC
T ss_pred hhcccceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCC
Confidence 0123445555556778999999999999999999999999977554
No 120
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.29 E-value=8e-12 Score=81.34 Aligned_cols=108 Identities=26% Similarity=0.445 Sum_probs=72.0
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeee-cCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA-SGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~~~ 79 (151)
|.+++.+|+|.|+|.+.|..+...+..+.|.|.. .++.+...+ ....+.+|+.+.|.|.+ .+.|.
T Consensus 76 i~~~~~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~------------~~~~~~~~~--~~~~~~~g~~~~l~C~~~~~~p~ 141 (212)
T 2v9r_A 76 HGRKSRPDEGVYVCVARNYLGEAVSHDASLEVAI------------LRDDFRQNP--SDVMVAVGEPAVMECQPPRGHPE 141 (212)
T ss_dssp CCSSCCCSCEEEEEEEEETTEEEECCCEEEEECE------------ECSSCSBCC--CCEEEETTSCEEEECBCCCEESC
T ss_pred ecCCCcccCeEEEEEEECCCCceeecceEEEEEe------------ccccceeCC--CceEecCCCcEEEEEecCCCCCC
Confidence 3567899999999999998874445566666641 233343333 45778899999999998 88999
Q ss_pred CeEEEEeCCeeeEecccCC--CCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGEMITNSFNN--TVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~~--~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
+.+.|++ ++..+...... .....+.+. .+...+.....|.+..
T Consensus 142 ~~v~W~~-~~~~l~~~~~~~~~~~~~L~i~----~~~~~d~G~Y~C~a~N 186 (212)
T 2v9r_A 142 PTISWKK-DGSPLDDKDERITIRGGKLMIT----YTRKSDAGKYVCVGTN 186 (212)
T ss_dssp CEEEEEE-TTEEECTTSTTEEEETTEEEES----SCCGGGCEEEEEEEEE
T ss_pred CEEEEEE-CCccCCCCcceEEccCCeEEEe----eCCHhhCeeEEEEEec
Confidence 9999999 56666532210 001122222 1345677789999764
No 121
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.29 E-value=7e-11 Score=76.76 Aligned_cols=107 Identities=13% Similarity=0.185 Sum_probs=69.7
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.+..+......+.|.|. .....|.+.... .. +.+|+.+.|.|.+.+.| |
T Consensus 75 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~----------~~~~~p~i~~~~--~~--~~~g~~v~l~C~~~~~p-p 139 (208)
T 3r4d_A 75 FQMITMKDMGVYTLDMTDENYRRTQATVRFHVH----------QPVTQPFLQVTN--TT--VKELDSVTLTCLSNDIG-A 139 (208)
T ss_dssp ECSCCGGGCEEEEEEEECSSCEEEEEEEEEEEE----------CCCCCCEEEESC--SS--CCTTCCEEEEEECSCTT-C
T ss_pred EccccccCCeEEEEEEEcccCceeEEEEEEEec----------cCCCCCEEecCC--ce--EeeCCCEEEEEECCCCC-C
Confidence 568899999999999999864345555566653 112335555543 22 77899999999999865 8
Q ss_pred eEEEEeCCeeeEecccCC---CCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 81 SIMWRREGGEMITNSFNN---TVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~~---~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
.+.|++ ++..+...... .....+.+. .+...+.....|.+..
T Consensus 140 ~i~W~~-~g~~l~~~~~~~~~~~~~~L~i~----~v~~~d~G~Y~C~a~N 184 (208)
T 3r4d_A 140 NIQWLF-NSQSLQLTERMTLSQNNSILRID----PIKREDAGEYQCEISN 184 (208)
T ss_dssp EEEEEE-TTEECCCCSSEEEETTTTEEEES----SCCGGGCEEEEEEEEC
T ss_pred ceEEEE-CCEeCCCCCCeEEcCCCCEEEEe----ccCHHhCeEEEEEEec
Confidence 999999 56665432210 001222222 1345677889999864
No 122
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.28 E-value=6e-12 Score=82.44 Aligned_cols=112 Identities=22% Similarity=0.427 Sum_probs=72.7
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeee-cCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA-SGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~~~ 79 (151)
|.+++.+|+|.|+|.+.|..+...+..+.|.|.. .+|.+...+ ....+.+|+.+.|.|.+ .+.|.
T Consensus 73 i~~v~~~d~G~Y~C~~~n~~g~~~~~~~~l~v~~------------~~~~~~~~~--~~~~~~~g~~v~l~C~~~~g~p~ 138 (217)
T 2vr9_A 73 MQGKKEQDGGEYWCVAKNRVGQAVSRHASLQIAV------------LRDDFRVEP--KDTRVAKGETALLECGPPKGIPE 138 (217)
T ss_dssp CBSSSCBCCEEEEEEEEETTEEEECCCEEEEECE------------ECCSCSBCC--CCEEECTTSCEEECCBCCCEESC
T ss_pred eccCCcccCceEEEEEecCCCccccccceEEEEE------------eCCCcEECC--CccEEcCCCeEEEEEECCCCCCC
Confidence 5678999999999999998875445556665531 234444444 46778899999999998 88999
Q ss_pred CeEEEEeCCeeeEecccCCC--CCCeeee-CCcee---EeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGEMITNSFNNT--VPPIVKI-PSQLI---GAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~~~--~~p~~~~-~~~~~---~~~~g~~~~l~C~~~g 127 (151)
+.+.|++ ++..+....... ....+.. ..... .+...+.....|.+..
T Consensus 139 ~~v~W~~-~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~N 191 (217)
T 2vr9_A 139 PTLIWIK-DGVPLDDLKAMSFGASSRVRIVDGGNLLISNVEPIDEGNYKCIAQN 191 (217)
T ss_dssp CEEEEEE-TTEEECCCCCC---CCCSEEEETTTEEEESSCCSTTCEEEEEEEEE
T ss_pred CeEEEEE-CCcCCCcccccccccCCcEEecCCCcEEEeeCCHHHCeEEEEEEEc
Confidence 9999999 566665322100 0111111 11111 2345677889999863
No 123
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.28 E-value=2.8e-11 Score=78.38 Aligned_cols=109 Identities=17% Similarity=0.312 Sum_probs=69.0
Q ss_pred CccccccCCeEEEEEEEcCC-C-CCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGV-P-PSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSP 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~-~-~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~ 78 (151)
|.+++++|+|.|+|.+.|.. + ...+..+.|.|.. ...+|.+...+ ...+.+|+.+.|.|.+.+.
T Consensus 62 i~~v~~~D~G~Y~C~a~n~~~g~~~~s~~~~l~V~~----------~~~~p~i~~~~---~~~v~~G~~v~L~C~~~~~- 127 (198)
T 1ugn_A 62 IPSITWEHTGRYRCYYGSDTAGRSESSDPLELVVTG----------AYIKPTLSAQP---SPVVNSGGNVTLQCDSQVA- 127 (198)
T ss_dssp ESSCCGGGCEEEEEEEEETTTEECCCCCCEEEEEEC----------SSCCCEEEEES---CSEEETTCCEEEEEECSSC-
T ss_pred ECCCCHHHCeEEEEEEECCCCCcccCCccEEEEEcc----------cccCCccccCC---ccccCCCCcEEEEEecCCC-
Confidence 56899999999999999986 4 2345566776641 12345555433 3578899999999999987
Q ss_pred CCeEEEEeCCeeeEecccC--CCC-----CCeeeeCCceeEeecCCcEEEEeeeccc
Q psy16421 79 PPSIMWRREGGEMITNSFN--NTV-----PPIVKIPSQLIGAHEGQQLVLECISEAY 128 (151)
Q Consensus 79 ~~~~~W~~~~~~~~~~~~~--~~~-----~p~~~~~~~~~~~~~g~~~~l~C~~~g~ 128 (151)
.+.+.|++ ++..+..... ... ...|.+. .+...+.....|.+...
T Consensus 128 ~~~v~W~k-~g~~~~~~~~~~~~~~~~~~~~~L~i~----~v~~~D~G~Y~C~a~n~ 179 (198)
T 1ugn_A 128 FDGFILCK-EGEDEHPQCLNSQPHARGSSRAIFSVG----PVSPSRRWWYRCYAYDS 179 (198)
T ss_dssp CSEEEEEE-C------CEEEC------CCEEEEEEC----CCCTTSCEEEEEEEECT
T ss_pred CcEEEEEE-CCCccCCccccccccCCCcceeEEEec----ccCcccCeEEEEEEEeC
Confidence 78999999 5554321110 000 0122222 24567888999998753
No 124
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.28 E-value=6.9e-12 Score=80.90 Aligned_cols=112 Identities=22% Similarity=0.304 Sum_probs=70.1
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..+ ..+..+.|.|.... . ...|.+...+ ....+.+|+.+.|.|.+.|.|.|
T Consensus 66 i~~~~~~d~G~Y~C~~~n~~g-~~~~~~~l~V~~~p-------~-~~~~~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p 134 (197)
T 2j8h_A 66 IASVTDDDATVYQVRATNQGG-SVSGTASLEVEVPA-------K-IHLPKTLEGM--GAVHALRGEVVSIKIPFSGKPDP 134 (197)
T ss_dssp ECSCCGGGCSEEEEEEEETTE-EEEEEEEEEEEEEE-------E-ECCSSCBTTB--EEEEEETTCCCEEEEEEEEESCC
T ss_pred ECcCCHHhCEEEEEEEEECCC-ceeEEEEEEEcCCC-------c-CCCCcccccc--CeEEEeCCCEEEEEEEEEecCCC
Confidence 568899999999999999877 45566666664210 0 0112211111 34567789999999999999999
Q ss_pred eEEEEeCCeeeEecccCCC-----CCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 81 SIMWRREGGEMITNSFNNT-----VPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~~~-----~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
.+.|++ +++.+....... ....+.+.. .+...+.....|.+..
T Consensus 135 ~i~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~~---~~~~~d~G~Y~C~a~N 182 (197)
T 2j8h_A 135 VITWQK-GQDLIDNNGHYQVIVTRSFTSLVFPN---GVERKDAGFYVVCAKN 182 (197)
T ss_dssp EEEEEE-SSCEECSSSSCEEEECSSEEEEECTT---CCCGGGCEEEEEEEEE
T ss_pred cEEEEE-CCEEeecCCCEEEEEcCCceEEEEeC---CCCcccCEeEEEEEEe
Confidence 999999 566655322100 000111111 0344667789999864
No 125
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.28 E-value=1.8e-11 Score=84.02 Aligned_cols=79 Identities=27% Similarity=0.396 Sum_probs=55.8
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..| ..+..+.|.|.... . ...|.....+ ....+.+|+.+.|.|.+.|.|.+
T Consensus 66 i~~v~~~d~G~Y~C~a~n~~g-~~~~~~~l~V~~~p-------~-~~~~~~~~~~--~~~~~~~g~~~~l~C~~~g~p~p 134 (305)
T 2nzi_A 66 IASVTDDDATVYQVRATNQGG-SVSGTASLEVEVPA-------K-IHLPKTLEGM--GAVHALRGEVVSIKIPFSGKPDP 134 (305)
T ss_dssp ESSCCGGGCSEEEEEEEETTE-EEEEEEEEEECEEE-------E-ECCCHHHHSS--CCEEEETTCCEEEEEEEEEESCC
T ss_pred EccCChhhCeEEEEEEEcCCC-CccceEEEEEecCC-------c-cCCCcccccc--ccEEecCCCEEEEEEEECCCCCC
Confidence 568899999999999999987 45566666664100 0 0112112222 35677889999999999999999
Q ss_pred eEEEEeCCeee
Q psy16421 81 SIMWRREGGEM 91 (151)
Q Consensus 81 ~~~W~~~~~~~ 91 (151)
.+.|++ ++..
T Consensus 135 ~i~W~~-~~~~ 144 (305)
T 2nzi_A 135 VITWQK-GQDL 144 (305)
T ss_dssp EEEEEE-SSSB
T ss_pred EEEEEE-CCEE
Confidence 999999 4444
No 126
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.28 E-value=8.9e-12 Score=82.31 Aligned_cols=108 Identities=19% Similarity=0.312 Sum_probs=61.9
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~~ 79 (151)
|.+++.+|+|.|+|.|.|..+ .....+.+.+. .++. ... ....+.+|+.+.|.|.+.| .|.
T Consensus 87 I~~v~~~D~G~Y~C~a~n~~~-~~~~~v~~~~~-------------~~~~--~~~--~~~~~~~g~~v~l~c~~~g~~P~ 148 (226)
T 4f80_A 87 IHNVTASDSGKYLCYFQDGDF-YEKALVELKVA-------------ALGS--DLH--VDVKGYKDGGIHLECRSTGWYPQ 148 (226)
T ss_dssp ESSCCGGGCEEEEEEEEETTE-EEEEEEEEEEE-------------BCCC--CCE--EEEEEEETTEEEEEEEEEEEBSC
T ss_pred EeeCchHHCeeEEEEEECCCc-EEEEEEEEeec-------------ccee--ccc--ceeeeccCCceeeEEEeccCCCC
Confidence 578999999999999999866 22222232221 1111 111 2356678999999999877 699
Q ss_pred CeEEEEeCCeeeEecccCCC---CCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGEMITNSFNNT---VPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
|.+.|+++++..+....... ..-.+.+ .....+...+....+|.+..
T Consensus 149 p~i~W~k~~~~~~~~~~~~~~~~~~g~~~v-~s~l~v~~~d~G~YtC~a~N 198 (226)
T 4f80_A 149 PQIQWSNNKGENIPTVEAPVVADGVGLYAV-AASVIMRGSSGEGVSCTIRS 198 (226)
T ss_dssp CEEEEECTTSCBCCCEECCCEECTTSCEEE-EEEEEECC----CEEEEEEE
T ss_pred CEEEEEECCceEcCCCceEEEECCCCcEEE-EEEEEechhcCcEEEEEEEe
Confidence 99999996665543222100 0000000 01123445677789999874
No 127
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.27 E-value=4e-11 Score=77.91 Aligned_cols=107 Identities=21% Similarity=0.337 Sum_probs=68.0
Q ss_pred CccccccCCeEEEEEEEcCCCC-CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEee-ecCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP-SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCA-ASGSP 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~-~~g~~ 78 (151)
|.+++.+|+|.|+|.+.|..|. ..+..+.|.|. .+|.+...+ ....+.+|+.+.|.|. +.+.|
T Consensus 69 i~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~l~V~-------------~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~~p 133 (212)
T 1f97_A 69 FSSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTVL-------------VPPSKPTIS--VPSSVTIGNRAVLTCSEHDGSP 133 (212)
T ss_dssp ESCCCGGGCEEEEEEEEETTSSSEEEEEEEEEEE-------------BCCCCCEEE--CCSEEETTSCEEEEEECSCCBS
T ss_pred EcccCcccCeEEEEEEEccCCCcccEEEEEEEEE-------------cCCCCcccC--CccccCCCCeEEEEEEcccCcC
Confidence 5688999999999999998662 12334455443 344443322 2356788999999999 79999
Q ss_pred CCeEEEEeCCee-eEecccCC------------CCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 79 PPSIMWRREGGE-MITNSFNN------------TVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 79 ~~~~~W~~~~~~-~~~~~~~~------------~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
.+.+.|++ +++ .+...... .....+.+. .+...+.....|.+..
T Consensus 134 ~~~i~W~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~----~~~~~d~G~Y~C~a~n 190 (212)
T 1f97_A 134 PSEYSWFK-DGISMLTADAKKTRAFMNSSFTIDPKSGDLIFD----PVTAFDSGEYYCQAQN 190 (212)
T ss_dssp CCEEEEEE-TTEESBC-----CBSCSSSCEEECTTTCCEEES----SCCGGGCEEEEEEEEC
T ss_pred CCEEEEEe-CCcccccccccccccccCceeEecCCCceEEEE----ecChhhCcEEEEEEcc
Confidence 99999999 555 54432210 001112211 2345677889999864
No 128
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.27 E-value=1.7e-11 Score=77.98 Aligned_cols=93 Identities=16% Similarity=0.201 Sum_probs=62.4
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC-eEEEEeCCeeeEecccC----------------------------
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP-SIMWRREGGEMITNSFN---------------------------- 97 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~-~~~W~~~~~~~~~~~~~---------------------------- 97 (151)
.+|.+...+ ..+.+.+|+++.|.|.+.+.+.+ .+.|++ ++..+.....
T Consensus 3 ~~P~i~~~p--~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~-~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~s~~~ 79 (176)
T 1f2q_A 3 QKPKVSLNP--PWNRIFKGENVTLTCNGNNFFEVSSTKWFH-NGSLSEETNSSLNIVNAKFEDSGEYKCQHQQVNESEPV 79 (176)
T ss_dssp -CCCCEEES--SCSEEETTCCEEEECCTTCC----CCEEEE-TTEECSCCSSEEEECSCCGGGCEEEEEECTTSSCCCCE
T ss_pred CCCEEEcCC--CCcceecCCcEEEEEeCCCCCCcceEEEEE-CCeECCCCceEEEEeccceecCEEEEEEcCCccccccE
Confidence 466666666 45788999999999999888775 699999 5554432221
Q ss_pred ---CCCCCeeeeCCceeEeecCCcEEEEeeec-ccCCCeeEEEcCCceec
Q psy16421 98 ---NTVPPIVKIPSQLIGAHEGQQLVLECISE-AYPKSVNYWTREKGDMI 143 (151)
Q Consensus 98 ---~~~~p~~~~~~~~~~~~~g~~~~l~C~~~-g~p~~~~~W~k~~~~~~ 143 (151)
+..++.+. ......+.+|+.+.|.|.+. +.|.+.+.|+|+|..+.
T Consensus 80 ~l~V~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~ 128 (176)
T 1f2q_A 80 YLEVFSDWLLL-QASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALK 128 (176)
T ss_dssp EEEEECSSEEE-EESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECC
T ss_pred EEEEeCcceee-cCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEe
Confidence 11122222 22334678999999999995 67777899999977653
No 129
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.27 E-value=4.7e-11 Score=79.28 Aligned_cols=87 Identities=21% Similarity=0.374 Sum_probs=64.3
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccC----------------------------------------
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFN---------------------------------------- 97 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~---------------------------------------- 97 (151)
..+.+.+|+++.|.|.+.+.|.+.+.|++ +++.+.....
T Consensus 23 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~ 101 (241)
T 3grw_A 23 KLLAVPAANTVRFRCPAAGNPTPSISWLK-NGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQT 101 (241)
T ss_dssp CEEEEETTSEEEEECCEECSSCCEEEEEE-TTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred cceEEcCCCeEEEEEEecCCCCceeEEEE-CCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEE
Confidence 45788899999999999999999999999 5555432210
Q ss_pred ----C----CCCCeee-eCCceeEeecCCcEEEEeeecccCCCeeEEEc----CCceeccC
Q psy16421 98 ----N----TVPPIVK-IPSQLIGAHEGQQLVLECISEAYPKSVNYWTR----EKGDMIAN 145 (151)
Q Consensus 98 ----~----~~~p~~~-~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k----~~~~~~~~ 145 (151)
+ ..+|.+. ..+....+.+|+.+.|.|.+.|.|.+.+.|++ +|..+..+
T Consensus 102 ~~l~V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~ 162 (241)
T 3grw_A 102 YTLDVLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPD 162 (241)
T ss_dssp EEEEEECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTT
T ss_pred EEEEEeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCC
Confidence 0 1123332 23556678899999999999999999999999 76555433
No 130
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.27 E-value=8.2e-12 Score=81.62 Aligned_cols=81 Identities=16% Similarity=0.347 Sum_probs=57.4
Q ss_pred CccccccCCeEEEEEEEcCCC--CCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC-
Q psy16421 1 MTEVSREHMGAYLCIASNGVP--PSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS- 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~--~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~- 77 (151)
|.+++.+|+|.|.|.+.|..+ ......+.|.|.. ....+|.+...+ ....+.+|+.+.|.|.+.+.
T Consensus 74 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~---------~~~~~P~i~~~~--~~~~~~~g~~v~l~C~~~g~~ 142 (213)
T 3mj8_L 74 ISKAQAGDEADYYCQSWDGTNSAWVFGSGTKVTVLG---------QPNAAPSVTLFP--PSSEELKTNQATLVCMINGFY 142 (213)
T ss_dssp ESSCCGGGCEEEEEEEEETTTTEEEEBCCEEEEEEC---------SCCBCCEEEEEC--CCHHHHTTTEEEEEEEEEEEB
T ss_pred ECCCChhhCEEEEEEeccCCcceeEEcCceEEEEeC---------CCCCCCeEEccC--CCcccccCCcEEEEEEeecee
Confidence 578999999999999999876 2334556666641 112466666544 23444579999999999885
Q ss_pred CC-CeEEEEeCCeeeEe
Q psy16421 78 PP-PSIMWRREGGEMIT 93 (151)
Q Consensus 78 ~~-~~~~W~~~~~~~~~ 93 (151)
|+ +.+.|++ +++.+.
T Consensus 143 p~~~~v~W~k-~g~~l~ 158 (213)
T 3mj8_L 143 PADVAVTWEA-DGTPIT 158 (213)
T ss_dssp SSCCEEEEEE-TTEEEC
T ss_pred CCCeEEEEEc-CCcccC
Confidence 33 4999999 666664
No 131
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.27 E-value=1.2e-11 Score=79.55 Aligned_cols=78 Identities=26% Similarity=0.475 Sum_probs=56.4
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeC-CCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDY-PTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~-~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++.+|+|.|+|.+.|..+ .....+.|.|. .+|.+... +......+.+|+.+.|.|.+.+.|.
T Consensus 67 i~~~~~~d~G~Y~C~~~n~~~-~~~~~~~l~v~-------------~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~ 132 (197)
T 3lcy_A 67 VMTEEQEDEGVYTCIATNEVG-EVETSSKLLLQ-------------ATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPV 132 (197)
T ss_dssp EECCSGGGCEEEEEEEECSSC-EEEEEEEEEEE-------------EEEEECTTSCCCSEEEEETTSCEEEEEEEEEESC
T ss_pred EecCCccCCEEEEEEEECCCC-ceeEEEEEEEE-------------cCCCCCCCccCCcceeecCCCeEEEEEEEeeeeC
Confidence 467899999999999999887 44555566554 22222211 1113456778999999999999999
Q ss_pred CeEEEEeCCeeeEe
Q psy16421 80 PSIMWRREGGEMIT 93 (151)
Q Consensus 80 ~~~~W~~~~~~~~~ 93 (151)
|.+.|++ ++..+.
T Consensus 133 p~v~W~~-~~~~~~ 145 (197)
T 3lcy_A 133 PAMTWFH-GQKLLQ 145 (197)
T ss_dssp CEEEEEE-TTEECC
T ss_pred CeeEEeE-CCEECC
Confidence 9999999 566654
No 132
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.26 E-value=1.1e-11 Score=80.46 Aligned_cols=108 Identities=18% Similarity=0.275 Sum_probs=66.1
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..+ ..+..+.|.|... ...|.+.. ..+.+|+.+.|.|.+.|.|.|
T Consensus 71 I~~v~~~D~G~Y~C~~~~~~~-~~~~~~~l~V~~~----------~~~p~~~~------~~~~~g~~v~l~C~~~g~P~p 133 (202)
T 3bp6_B 71 IPSVQVRDSGQYRCLVICGAA-WDYKYLTVKVKAS----------YMRIDTRI------LEVPGTGEVQLTCQARGYPLA 133 (202)
T ss_dssp ECSCCGGGCEEEEEEEEETTE-EEEEEEEEEEEBC----------CCCEEEEE------EECTTTCCEEEEEEEEEBSCC
T ss_pred ECCCCHHHCcEEEEEEEeCCC-cceEEEEEEecCC----------CCcccEEE------EecCCCCeEEEEEEccccCCc
Confidence 568999999999999999877 3455666666411 12222221 134579999999999999999
Q ss_pred eEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 81 SIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
.+.|+++ +..+.........-.+.. .....+...+.....|.+..
T Consensus 134 ~v~W~~~-~~~~~~~~~~~~~~~~~~-~~i~~v~~~d~G~Y~C~a~N 178 (202)
T 3bp6_B 134 EVSWQNV-SVPANTSHIRTPEGLYQV-TSVLRLKPQPSRNFSCMFWN 178 (202)
T ss_dssp EEEETTC-CSCCEEEEEECTTSCEEE-EEEEEECCCTTCCEEEEEEE
T ss_pred eEEEEeC-CCCccCceeeCCCCCEEE-EEEEEEEcCCCCEEEEEEEc
Confidence 9999984 433221100000000100 01123445677889999864
No 133
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.26 E-value=1.5e-11 Score=82.04 Aligned_cols=80 Identities=19% Similarity=0.392 Sum_probs=56.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCC----ccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSV----SKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~----~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g 76 (151)
|.+++.+|+|.|+|.+.|..+... +..+.|.|.. ...+|.+.... ...+.+.+|+.+.|.|.+.+
T Consensus 94 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~----------~~~~~~~~~~~-~~~~~v~~g~~v~L~C~~~g 162 (250)
T 2fbo_J 94 LTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTG----------HTPSNNVHVST-AEVVQVDEGNDITMTCPCTD 162 (250)
T ss_dssp ECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETT----------TSCCSCCEECC-CSEEECCTTCCEEECCCEES
T ss_pred EeeCChhhCeEEEEEeccCccCCcccccceeEEEEEec----------cCCCCeEEEec-CceEEecCCCcEEEEEEecC
Confidence 578999999999999999876322 2245555431 11234444332 14567778999999999999
Q ss_pred CCCCeEEEEeCCeeeE
Q psy16421 77 SPPPSIMWRREGGEMI 92 (151)
Q Consensus 77 ~~~~~~~W~~~~~~~~ 92 (151)
.|.|.+.|++ +++.+
T Consensus 163 ~p~p~v~W~k-~~~~~ 177 (250)
T 2fbo_J 163 CANANVTWYT-GPTFF 177 (250)
T ss_dssp CTTCEEEEEE-EEECS
T ss_pred CCCCeeEEEe-CCCcc
Confidence 9999999999 55544
No 134
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.26 E-value=1.7e-11 Score=80.87 Aligned_cols=81 Identities=21% Similarity=0.417 Sum_probs=59.5
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeE-EEEeee-cCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNV-SMRCAA-SGSP 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~-~l~C~~-~g~~ 78 (151)
|.+++.+|+|.|+|.+.+..+......+.|.|.. ....|.+...+ ....+.+|+.+ .|.|.+ .+.|
T Consensus 81 i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~----------~p~~~~~~~~~--~~~~~~~g~~~~~l~C~~~~~~p 148 (231)
T 2pet_A 81 LAEAQVGDERDYVCVVRAGAAGTAEATARLNVFA----------KPEATEVSPNK--GTLSVMEDSAQEIATCNSRNGNP 148 (231)
T ss_dssp ESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEB----------CCCCCEEEECC--SSCCTTCCSEEEEEEEEEEEEBS
T ss_pred EcccCcccCceEEEEEEecCCCceEEEEEEEEEe----------cCCCcEEecCC--cceeecCCCceEEEEEEeECccc
Confidence 5689999999999999998722455666666641 12335555544 44566788887 999999 8899
Q ss_pred CCeEEEEeCCeeeEec
Q psy16421 79 PPSIMWRREGGEMITN 94 (151)
Q Consensus 79 ~~~~~W~~~~~~~~~~ 94 (151)
.|.+.|++ ++..+..
T Consensus 149 ~p~i~W~~-~~~~~~~ 163 (231)
T 2pet_A 149 APKITWYR-NGQRLEV 163 (231)
T ss_dssp CCEEEEEE-TTEECCC
T ss_pred CCEEEEEE-CCccCcc
Confidence 99999999 5666553
No 135
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.26 E-value=2.3e-11 Score=80.38 Aligned_cols=109 Identities=16% Similarity=0.235 Sum_probs=69.7
Q ss_pred CccccccCCeEEEEEEEcCCCC-CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP-SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++.+|+|.|+|.+.|..+. ..+..+.|.|. ....+|.+...+ ...+.+|+++.|.|.+.+.+.
T Consensus 68 I~~v~~~D~G~Y~C~a~n~~~~~~~s~~~~l~V~----------~~~~~P~i~~~p---~~~v~~G~~v~L~C~~~~~~~ 134 (218)
T 1uct_A 68 IDHMDANKAGRYQCQYRIGHYRFRYSDTLELVVT----------GLYGKPFLSADR---GLVLMPGENISLTCSSAHIPF 134 (218)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEECCCEEEEEE----------CSSCCCEEEESS---CSEECTTCCCEEEEECSSSCC
T ss_pred EcccccccCEEEEEEEEcCCCceeecCCEEEEEc----------CcccCCEEEeCC---CCccCCCCCEEEEEeCCCCCC
Confidence 5688999999999999997652 23455666653 112456665544 347789999999997677788
Q ss_pred CeEEEEeCCeeeEecccC-CCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGEMITNSFN-NTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
+.+.|+| ++..+..... ......|.+. .+...+.....|.+..
T Consensus 135 ~~~~W~k-~g~~~~~~~~~~~~~~~L~I~----~v~~~D~G~Y~C~a~n 178 (218)
T 1uct_A 135 DRFSLAK-EGELSLPQHQSGEHPANFSLG----PVDLNVSGIYRCYGWY 178 (218)
T ss_dssp SEEEEEE-TTCSSCCSEEECSSSEEEECC----SCCGGGCEEEEEEEEC
T ss_pred CEEEEEE-CCCcccccccCCCccCEEEEc----cCCcccCEEEEEEEEc
Confidence 8999999 4543321000 0011122221 2445778889999863
No 136
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.25 E-value=4.5e-11 Score=81.34 Aligned_cols=111 Identities=17% Similarity=0.281 Sum_probs=73.7
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~~ 79 (151)
|.+++.+|+|.|+|.+.+......+..+.|.|.. ....+|.+...+ ....+.+|+.+.|.|.+.+ .|.
T Consensus 148 i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~---------~~~~~p~i~~~~--~~~~~~~g~~~~l~C~~~~~~p~ 216 (289)
T 3ejj_X 148 IRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNR---------VHPEPPQIKLEP--SKLVRIRGEAAQIVCSATNAEVG 216 (289)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEEECCCEEEEEES---------SCCCCCEEEEES--SSEECCSSSCEEEEEEEEESSSC
T ss_pred EeecccccCEEEEEEEEeCCCccccccEEEEEEE---------CCCCCCeEEecC--CceEEEeCCcEEEEEEeCCCCCc
Confidence 4678999999999999954333556667777641 122567777666 4566778999999999988 789
Q ss_pred CeEEEEeCCeeeEecccCC---CC----CCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGEMITNSFNN---TV----PPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~~---~~----~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
+.+.|++ ++..+...... .. ...+.+. .+...+.....|.+..
T Consensus 217 ~~i~W~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~----~v~~~d~G~Y~C~a~N 266 (289)
T 3ejj_X 217 FNVILKR-GDTKLEIPLNSDFQDNYYKKVRALSLN----AVDFQDAGIYSCVASN 266 (289)
T ss_dssp CEEEEEE-TTEECCCCEEEEECSSSEEEEEEEEES----SCCSSSCEEEEEEEEC
T ss_pred eEEEEEE-CCEEeeccCCcccccceEEeeEEEEEE----eecccCCEEEEEEEEc
Confidence 9999999 55554321100 00 0111211 2456778899999864
No 137
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.25 E-value=6e-11 Score=79.56 Aligned_cols=91 Identities=18% Similarity=0.146 Sum_probs=65.9
Q ss_pred CeeEeCCCCCceEeecCCeEEEEeeecCCCCC-eEEEEeCCeeeEecccC------------------------------
Q psy16421 49 PDILDYPTSSDIMVREGSNVSMRCAASGSPPP-SIMWRREGGEMITNSFN------------------------------ 97 (151)
Q Consensus 49 p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~-~~~W~~~~~~~~~~~~~------------------------------ 97 (151)
|.+...+ ....+.+|+.+.|.|.+.+.+.+ .+.|++ +++.+.....
T Consensus 2 P~i~~~p--~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~-~g~~~~~~~~~l~i~~~~~~d~G~Y~C~~~~~~~s~~~~l 78 (262)
T 3rjd_A 2 AVITLQP--PWVSVFQEETVTLHCEVLHLPGSSSTQWFL-NGTATQTSTPSYRITSASVNDSGEYRCQRGLSGRSDPIQL 78 (262)
T ss_dssp CEEEESS--CCSEEETTCCEEEEEECSSCCCTTCEEEEE-TTEECSCCSSEEEESSCCGGGCEEEEEEESSSCCCCCEEE
T ss_pred CeEecCC--CcEEeeCCCeEEEEEECCCCCCCceEEEEE-CCEEeeccCCeEEEecCCcccCeEEEEEEecCCccccEEE
Confidence 5566655 56788899999999999998877 999999 5665532211
Q ss_pred -CCCCCeeeeCCceeEeecCCcEEEEeee-cccCCCeeEEEcCCceec
Q psy16421 98 -NTVPPIVKIPSQLIGAHEGQQLVLECIS-EAYPKSVNYWTREKGDMI 143 (151)
Q Consensus 98 -~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~~W~k~~~~~~ 143 (151)
+..++ +...+....+.+|+.+.|.|.+ .+.|.+.+.|+|+|..+.
T Consensus 79 ~v~~~~-~~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~ 125 (262)
T 3rjd_A 79 EIHRGW-LLLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFK 125 (262)
T ss_dssp EEECSS-EEEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEE
T ss_pred EEeccc-eEecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccc
Confidence 11122 2223334567899999999999 678888999999987653
No 138
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.25 E-value=3.1e-11 Score=78.62 Aligned_cols=119 Identities=15% Similarity=0.263 Sum_probs=69.4
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEecccc--------ceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEe
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYF--------SKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRC 72 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~--------~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C 72 (151)
|.+++.+|+|.|+|.+.|..+ .....+.|.|..... ... .+.....|.+.... +....+.+|+.+.|.|
T Consensus 63 i~~v~~~D~G~Y~C~~~n~~~-~~~~~~~l~v~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~-~~~~~v~~g~~~~l~C 139 (212)
T 2r15_A 63 INEPTPNDKGKYVMELFDGKT-GHQKTVDLSGQAYDEAYAEFQRLKQA-AIAEKNRARVLGGL-PDVVTIQEGKALNLTC 139 (212)
T ss_dssp EESCCGGGCEEEEEEEECSSC-EEEEEEEECHHHHHHHHHHHHHHHHH-HHHHHHSCEEEEBC-CSEEEEETTCCEEEEE
T ss_pred ECCCCcccCEEEEEEEecCCc-ceEEEEEEEEeeccchhhhccccCcc-cccccCCCcccccC-CCcEEEccCCeEEEEE
Confidence 568899999999999999776 333333333210000 000 00000133333322 1457888999999999
Q ss_pred eecCCCCCeEEEEeCCeeeEecccCCC------CCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 73 AASGSPPPSIMWRREGGEMITNSFNNT------VPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 73 ~~~g~~~~~~~W~~~~~~~~~~~~~~~------~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
.+.|.|.|.+.|++ ++..+....... ....+.+. .+...+.....|.+..
T Consensus 140 ~~~g~p~p~v~W~~-~~~~~~~~~~~~~~~~~~~~~~L~i~----~~~~~d~G~Y~C~a~N 195 (212)
T 2r15_A 140 NVWGDPPPEVSWLK-NEKALAQTDHCNLKFEAGRTAYFTIN----GVSTADSGKYGLVVKN 195 (212)
T ss_dssp EEECSSCCEEEEEE-TTEEECCCSSEEEEEETTTEEEEEES----SCCGGGCEEEEEEEEE
T ss_pred EEcCCCCceEEEEE-CCeECccCCCEEEEEcCCCEEEEEEc----CcchHHCeEEEEEEEc
Confidence 99999999999999 566655322100 00012221 1345667789998864
No 139
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.25 E-value=2e-11 Score=79.35 Aligned_cols=85 Identities=25% Similarity=0.383 Sum_probs=61.1
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEe----------c--ccC----------------------------
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMIT----------N--SFN---------------------------- 97 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~----------~--~~~---------------------------- 97 (151)
..+.+.+|+.+.|.|.+.+.|.+.+.|+++ +..+. . ..+
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~v~~~D~G~Y~C~~~~~ 87 (212)
T 1f97_A 9 SDVQVPENESIKLTCTYSGFSSPRVEWKFV-QGSTTALVCYNSQITAPYADRVTFSSSGITFSSVTRKDNGEYTCMVSEE 87 (212)
T ss_dssp SEEEEETTCCEEEECEEESCSSEEEEEEEE-ETTEEEEEEETTEECGGGTTTEEEETTEEEESCCCGGGCEEEEEEEEET
T ss_pred CCeEEEcCCCEEEEeEeCCCCCcEEEEEEC-CCceeeEEecCCcccccccCcEEeeceeEEEcccCcccCeEEEEEEEcc
Confidence 567888999999999999989999999994 43311 0 000
Q ss_pred -------------CCCCCeeeeCCceeEeecCCcEEEEee-ecccCCCeeEEEcCCc-eec
Q psy16421 98 -------------NTVPPIVKIPSQLIGAHEGQQLVLECI-SEAYPKSVNYWTREKG-DMI 143 (151)
Q Consensus 98 -------------~~~~p~~~~~~~~~~~~~g~~~~l~C~-~~g~p~~~~~W~k~~~-~~~ 143 (151)
+..+|.+...+....+.+|+.+.|.|. +.|.|.|.+.|+|++. .+.
T Consensus 88 ~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~ 148 (212)
T 1f97_A 88 GGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLT 148 (212)
T ss_dssp TSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC
T ss_pred CCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCccccc
Confidence 112333222223346789999999999 7899999999999977 554
No 140
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.24 E-value=1.6e-10 Score=73.50 Aligned_cols=100 Identities=16% Similarity=0.212 Sum_probs=66.8
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..+ +..+.|.|. .++.....+ ...+.+|+.+.|.|.+.+.+++
T Consensus 58 i~~~~~~d~G~Y~C~~~n~~~---s~~~~l~V~-------------~~~~~~~~~---~~~~~~g~~~~l~C~~~~~~~~ 118 (175)
T 1fnl_A 58 IDAATVNDSGEYRCQTNLSTL---SDPVQLEVH-------------IGWLLLQAP---RWVFKEEDPIHLRCHSWKNTAL 118 (175)
T ss_dssp ESSCCGGGCEEEEEECSSSCC---CCCEEEEEE-------------CSSEEEECS---CSEEETTCCEEEEEEECTTCCC
T ss_pred EeCCCcccCEEEEEEeeCCcc---cccEEEEEe-------------CCCceeeCC---CceecCCCCEEEEEEcCCCCCc
Confidence 568899999999999988543 456666664 233333332 3567889999999999887654
Q ss_pred -eEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 81 -SIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 81 -~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
.+.|++ ++..+.... ....+.+. .+...+.....|.+..
T Consensus 119 ~~~~W~k-~g~~~~~~~---~~~~L~i~----~v~~~d~G~Y~C~a~n 158 (175)
T 1fnl_A 119 HKVTYLQ-NGKDRKYFH---HNSDFHIP----KATLKDSGSYFCRGLV 158 (175)
T ss_dssp EEEEEEE-TTEEEEEEE---ECCCEEES----SCCGGGCEEEEEEEEE
T ss_pred eEEEEEE-CCeEccCCC---CCCEEEEc----ccChhhCeEEEEEEEc
Confidence 999999 566554211 11223322 1345677789999864
No 141
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.24 E-value=1e-10 Score=76.37 Aligned_cols=86 Identities=20% Similarity=0.371 Sum_probs=59.2
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEeCC-ee---e--------------------------EecccC----------
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRREG-GE---M--------------------------ITNSFN---------- 97 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~-~~---~--------------------------~~~~~~---------- 97 (151)
..+.+.+|+++.|.|.+.+.+.+.+.|++.+ +. . +....-
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 88 (213)
T 3nl4_L 9 ASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATYYC 88 (213)
T ss_dssp SEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred CeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEEEE
Confidence 4678889999999999999999999999832 11 0 000000
Q ss_pred ---C-------------------CCCCeeeeCCceeEeecCCcEEEEeeecc-cCCCeeEEEcCCceec
Q psy16421 98 ---N-------------------TVPPIVKIPSQLIGAHEGQQLVLECISEA-YPKSVNYWTREKGDMI 143 (151)
Q Consensus 98 ---~-------------------~~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~~~~W~k~~~~~~ 143 (151)
. ..+|.+...+....+.+|+.+.|.|.+.| .|.|.++|+|+|..+.
T Consensus 89 ~~~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~ 157 (213)
T 3nl4_L 89 QSTYENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQT 157 (213)
T ss_dssp EECCSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECC
T ss_pred ecCCCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCC
Confidence 0 12233333222233456999999999998 8999999999987664
No 142
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.24 E-value=4.8e-11 Score=76.48 Aligned_cols=109 Identities=21% Similarity=0.406 Sum_probs=69.1
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..+ .....+.|.|. .+|.+...+ ...+.+|+.+.|.|.+.+.|.+
T Consensus 62 i~~~~~~d~G~Y~C~~~~~~~-~~~~~~~l~V~-------------~~p~~~~~~---~~~~~~g~~v~l~C~~~~~p~~ 124 (192)
T 2va4_A 62 VRNIINSDGGPYVCRATNKAG-EDEKQAFLQVF-------------VQPHIIQLK---NETTYENGQVTLVCDAEGEPIP 124 (192)
T ss_dssp ECSCCGGGCEEEEEEEEETTE-EEEEEEEEEEE-------------EEEEEEEEC---CEEECTTSEEEEEEEEEEESCC
T ss_pred EecCChhcCcEEEEEEEcccc-ccceEEEEEEE-------------ccCcccccC---cceEEeCCeEEEEEEecCCCCC
Confidence 568899999999999999877 34455555553 345554432 3566779999999999999999
Q ss_pred eEEEEeCC-eeeEecccCCCCCCeeeeC-------CceeEeecCCcEEEEeeecc
Q psy16421 81 SIMWRREG-GEMITNSFNNTVPPIVKIP-------SQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 81 ~~~W~~~~-~~~~~~~~~~~~~p~~~~~-------~~~~~~~~g~~~~l~C~~~g 127 (151)
.+.|++++ +..+.... ......+... .....+...+.....|.+..
T Consensus 125 ~v~W~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 178 (192)
T 2va4_A 125 EITWKRAVDGFTFTEGD-KSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCEAAS 178 (192)
T ss_dssp EEEEEETTTTEEECTTC-BCTTSCEEEEEETTEEEEEEESCCGGGCEEEEEEEEC
T ss_pred cEEEEeCCCCceeeccc-cccCCcEEEeeccCceEEEEecCCcccCEEEEEEEEe
Confidence 99999943 33333211 0111111111 01112345677889999864
No 143
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.24 E-value=1e-11 Score=81.15 Aligned_cols=81 Identities=12% Similarity=0.242 Sum_probs=57.0
Q ss_pred CccccccCCeEEEEEEEcCCC-CCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC--
Q psy16421 1 MTEVSREHMGAYLCIASNGVP-PSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS-- 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~-~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-- 77 (151)
|.+++.+|+|.|.|.+.|..+ ......+.|.|.. ....+|.+...+ ....+.+|+.+.|.|.+.|.
T Consensus 72 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~---------~~~~~P~v~~~~--~~~~~~~g~~v~l~C~~~g~~p 140 (211)
T 3tv3_L 72 VSGLQTDDEAVYYCGSLVGNWDVIFGGGTKLTVLG---------QPKAAPSVTLFP--PSSEELQANKATLVCLISDFYP 140 (211)
T ss_dssp EESCCGGGCEEEEEEEEETTTEEEECCCEEEEECC---------SCCBCCEEEEEC--CCHHHHHTTCEEEEEEEEEEBS
T ss_pred ECCCChhHCEEEEEEEecCCCceeECCCceEEEeC---------CCCcCCeeEecC--CchhhhcCCCeEEEEEeeeecC
Confidence 578999999999999999876 2344455666531 112466666544 23344479999999999884
Q ss_pred CCCeEEEEeCCeeeEe
Q psy16421 78 PPPSIMWRREGGEMIT 93 (151)
Q Consensus 78 ~~~~~~W~~~~~~~~~ 93 (151)
+.+.+.|++ +++.+.
T Consensus 141 ~~~~v~W~k-~g~~l~ 155 (211)
T 3tv3_L 141 GAVTVAWKA-DSSPVK 155 (211)
T ss_dssp SCCEEEEEE-TTEEEC
T ss_pred CCeEEEEEE-CCeecC
Confidence 357899999 666654
No 144
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.24 E-value=1.3e-10 Score=75.88 Aligned_cols=73 Identities=16% Similarity=0.324 Sum_probs=54.2
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC-CC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS-PP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-~~ 79 (151)
|.+++.+|+|.|+|.+.|. ..+..+.|.|. .+|.+...+ ...+.+|+.+.|.|.+.+. |.
T Consensus 58 i~~v~~~D~G~Y~C~a~n~---~~s~~~~l~V~-------------~~p~~~~~~---~~~v~~G~~v~L~C~~~~~~p~ 118 (204)
T 3sgj_C 58 IDAATVDDSGEYRCQTQLS---TLSDPVQLEVH-------------IGWLLLQAP---RWVFKEEDPIHLRCHSWKNTAL 118 (204)
T ss_dssp ESSCCGGGCEEEEEEETTS---BCCCCEEEEEE-------------CSSEEEECS---CSEEETTCCEEEEEEEGGGCCC
T ss_pred EecccccCCEEEEEEeCCC---cccccEEEEEe-------------cCceEecCC---ceeEeCCCcEEEEEEecCCCCC
Confidence 5689999999999999874 34556666664 445555544 3678899999999999654 56
Q ss_pred CeEEEEeCCeeeEe
Q psy16421 80 PSIMWRREGGEMIT 93 (151)
Q Consensus 80 ~~~~W~~~~~~~~~ 93 (151)
+.+.|++ +++.+.
T Consensus 119 ~~v~W~k-~g~~~~ 131 (204)
T 3sgj_C 119 HKVTYLQ-NGKGRK 131 (204)
T ss_dssp EEEEEEE-TTEEEE
T ss_pred ceEEEEE-CCcEee
Confidence 8899999 565553
No 145
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.24 E-value=1.3e-11 Score=80.63 Aligned_cols=81 Identities=15% Similarity=0.251 Sum_probs=54.5
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCC-C
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSP-P 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~-~ 79 (151)
|.+++.+|+|.|.|.+.|..+........|.|.. ....+|.+...+ ......+|+.+.|.|.+.+.+ .
T Consensus 77 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~---------~~~~~P~v~~~~--~~~~~~~g~~v~L~C~~~g~~p~ 145 (212)
T 1q0x_L 77 ITGAQTEDEAIYFCALWSNNKLVFGGGTKLTVLG---------QPKSSPTVTLFP--PSSEELSTAKATLVCTITDFYPG 145 (212)
T ss_dssp ESSCCGGGCEEEEEEEECSSCEEECCCEEEEECC---------SCCBCCEEEEEC--CCHHHHTTTEEEEEEEEEEEBSS
T ss_pred ECCCCccCCEEEEEEEecCchhhcCCCeEEEEec---------CCCCCCeeEEeC--CCHHHccCCcEEEEEEEEEEeCC
Confidence 5789999999999999998653233444555531 112466665533 223344688999999998744 3
Q ss_pred C-eEEEEeCCeeeEe
Q psy16421 80 P-SIMWRREGGEMIT 93 (151)
Q Consensus 80 ~-~~~W~~~~~~~~~ 93 (151)
+ .+.|++ +++.+.
T Consensus 146 ~~~v~W~k-~g~~l~ 159 (212)
T 1q0x_L 146 VVTVDWKV-DGTPVT 159 (212)
T ss_dssp CCEEEEEE-TTEEEC
T ss_pred CeEEEEEE-CCEeCC
Confidence 3 899999 666664
No 146
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.23 E-value=5e-11 Score=76.84 Aligned_cols=114 Identities=28% Similarity=0.409 Sum_probs=70.7
Q ss_pred CccccccCCeEEEEEEEcCCCCCCc--cceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVS--KRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSP 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~ 78 (151)
|.+++.+|+|.|+|.+.|..+.... ..+.+.+.... .....+|.+...+ ....+.+|+.+.|.|.+.+.|
T Consensus 70 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~p~~~~~~--~~~~~~~g~~~~l~C~~~g~p 141 (201)
T 3s97_C 70 IANVEASDKGNYSCFVSSPSITKSVFSKFIPLIPIPER------TTKPYPADIVVQF--KDVYALMGQNVTLECFALGNP 141 (201)
T ss_dssp ESSCCGGGCEEEEEEEEEGGGTEEEECCCEEEEEECCS------SCCCEEEEEEEEC--CCEEEETTCCEEEEEEEEEES
T ss_pred ECcCCcccCeEEEEEEEecCCCcchhhcccceeecccc------ccCCCCCceEecC--CceEEecCCcEEEEEEccCCC
Confidence 5688999999999999997653222 23333332110 0112345555554 367888999999999999999
Q ss_pred CCeEEEEeCCeeeEecccC-CCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 79 PPSIMWRREGGEMITNSFN-NTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 79 ~~~~~W~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
.+.+.|++ ++..+..... ......+.+. .+...+.....|.+..
T Consensus 142 ~p~v~W~~-~~~~~~~~~~~~~~~~~L~i~----~v~~~d~G~Y~C~a~n 186 (201)
T 3s97_C 142 VPDIRWRK-VLEPMPSTAEISTSGAVLKIF----NIQLEDEGIYECEAEN 186 (201)
T ss_dssp CCEEEEEE-TTBCCCTTCEEETTTTEEEEC----SCCGGGCEEEEEEEEE
T ss_pred CCceEEEe-CCCcCCCceeecCCCCEEEEc----cCChhhCEEEEEEEEe
Confidence 99999999 4544332110 0011122222 1345677889999864
No 147
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.23 E-value=8.9e-12 Score=81.34 Aligned_cols=75 Identities=21% Similarity=0.289 Sum_probs=53.6
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCe-eEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPD-ILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++.+|+|.|.|.|.|..+ ..+..+.|.|. .+|. +...+ . ..+.+|+.+.|.|.+.+.++
T Consensus 58 I~~v~~~D~G~Y~C~a~n~~~-~~~~~~~l~V~-------------~~p~~~~~~~--~-~~~~~G~~~~L~C~~~~~~p 120 (202)
T 1vca_A 58 MNPVSFGNEHSYLCTATCESR-KLEKGIQVEIY-------------SFPKDPEIHL--S-GPLEAGKPITVKCSVADVYP 120 (202)
T ss_dssp ESSCCGGGCSEEEEEEEETTE-EEEEEEEEEEE-------------BCCSCCEEEE--S-SCEETTSCEEEEEEEEEEBS
T ss_pred ECcCCHHHCEEEEEEEEECCc-eEeeEEEEEEE-------------eCCCCCEeCC--c-eEEcCCCCEEEEEEECCcCC
Confidence 578999999999999999876 45566676664 2222 22222 2 45778999999999987533
Q ss_pred ---CeEEEEeCCeeeEe
Q psy16421 80 ---PSIMWRREGGEMIT 93 (151)
Q Consensus 80 ---~~~~W~~~~~~~~~ 93 (151)
+.+.|++ +++.+.
T Consensus 121 ~~~~~i~W~k-~~~~l~ 136 (202)
T 1vca_A 121 FDRLEIDLLK-GDHLMK 136 (202)
T ss_dssp GGGEEEEEEE-TTEEEE
T ss_pred CCCeEEEEEe-CCeECc
Confidence 3789999 566654
No 148
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.23 E-value=1.7e-11 Score=80.11 Aligned_cols=81 Identities=21% Similarity=0.418 Sum_probs=56.0
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~~ 79 (151)
|.+++.+|+|.|+|.+.|..+........|.|. ....+|.+...+ ......+|+.+.|.|.+.| .|.
T Consensus 75 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~----------~~~~~p~v~~~~--~~~~~~~g~~~~l~C~~~g~~p~ 142 (213)
T 3d9a_L 75 INSVETEDFGMYFCQQSNSWPYTFGGGTKLEIK----------RADAAPTVSIFP--PSSEQLTSGGASVVCFLNNFYPK 142 (213)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC----------CCCBCCEEEEEC--CCHHHHHTTEEEEEEEEEEEBSS
T ss_pred ECCCChhhCEEEEEeeecCCcceeCCCEEEEEe----------cCCCCceeEeEC--CChhhcCCCcEEEEEEEeeecCC
Confidence 578999999999999999876433444566653 112356665533 2223447899999999977 565
Q ss_pred C-eEEEEeCCeeeEec
Q psy16421 80 P-SIMWRREGGEMITN 94 (151)
Q Consensus 80 ~-~~~W~~~~~~~~~~ 94 (151)
+ .+.|++ +++.+..
T Consensus 143 ~~~v~W~k-~g~~~~~ 157 (213)
T 3d9a_L 143 DINVKWKI-DGSERQN 157 (213)
T ss_dssp CCEEEEEE-TTEEECT
T ss_pred ceEEEEEc-CCCcCcc
Confidence 5 899999 6666653
No 149
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.23 E-value=4e-11 Score=77.63 Aligned_cols=89 Identities=17% Similarity=0.181 Sum_probs=53.5
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEec-------ccC----------------------
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITN-------SFN---------------------- 97 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~-------~~~---------------------- 97 (151)
.+|.+...+ . ..+.+|+++.|.|.+.+.+. .+.|+++ +..+.. ...
T Consensus 4 ~~P~i~~~p--~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~-g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 78 (196)
T 2d3v_A 4 SKATLWAEP--G-SVISRGNSVTIRCQGTLEAQ-EYRLVKE-GSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYY 78 (196)
T ss_dssp CBCEEEEES--C-SEEETTCCEEEEEECCTTCC-EEEEEET-TCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEeCC--C-CcccCCCeEEEEEeCCCCCc-EEEEEEC-CCCCCcccccccCCccccEEEeccCChhHCeEEEEEEe
Confidence 567777766 3 37889999999999988765 9999994 443321 000
Q ss_pred ---------------C---CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCcee
Q psy16421 98 ---------------N---TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDM 142 (151)
Q Consensus 98 ---------------~---~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~ 142 (151)
+ ..+|.+...+ ...+.+|+++.|.|.+.+.| +.+.|+|+|..+
T Consensus 79 n~~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~ 139 (196)
T 2d3v_A 79 SPAGWSEPSDPLELVVTGFYNKPTLSALP-SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHK 139 (196)
T ss_dssp ETTEECBCCCCEEEEEECSSCCCEEEC------------CEEEEEESSCC-SEEEEEEC---C
T ss_pred CCCCcCCcCccEEEEecCCCCCCeEEccC-CccccCCCcEEEEEEcCCCC-CEEEEEccCCcc
Confidence 0 0133443332 24678999999999999998 899999998755
No 150
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.23 E-value=2.5e-11 Score=78.53 Aligned_cols=108 Identities=15% Similarity=0.242 Sum_probs=70.4
Q ss_pred CccccccCCeEEEEEEEcCCC-CCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVP-PSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~-~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++.+|+|.|+|.+.|..+ ...+..+.|.|. ....+|.+...+ . ..+.+|+++.|.|.+.+ +.
T Consensus 62 i~~v~~~D~G~Y~C~a~n~~g~~~~s~~~~l~V~----------~~~~~p~~~~~~--~-~~v~~G~~v~L~C~~~~-~~ 127 (196)
T 3p2t_A 62 IPSMTEDYAGRYRCYYRSPVGWSQPSDPLELVMT----------GAYSKPTLSALP--S-PLVTSGKSVTLLCQSRS-PM 127 (196)
T ss_dssp ESSCCGGGCEEEEEEEEETTEEBCCCCCEEEEEE----------CSSCCCEEEEES--C-SEECTTCCEEEEEEEEE-EE
T ss_pred eccCCcccCceEEEEEeCCCcccCCCccEEEEec----------CCCCCCEEEeCC--c-ceecCCCeEEEEEecCC-CC
Confidence 568899999999999999887 345666777663 112456666554 2 36789999999999987 45
Q ss_pred CeEEEEeCCeeeEecccCC------CCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGEMITNSFNN------TVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~~------~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
+.+.|++ ++..+...... .....+.+ ..+...+.....|.+..
T Consensus 128 ~~~~w~k-~g~~~~~~~~~~~~~~~~~~~~L~i----~~v~~~d~G~Y~C~a~n 176 (196)
T 3p2t_A 128 DTFLLCK-ERAAHPLLCLRSEHGAQQHQAEFPM----SPVTSVHGGTYRCFSSH 176 (196)
T ss_dssp EEEEEEE-TTCCCGGGSEEEEEEEEEEEEEEEE----CSCCGGGCEEEEEEEEC
T ss_pred CEEEEEe-CCCcccceeecccccccCcceEEEe----CCCcccCCCeEEEEEEc
Confidence 6899999 45433211000 00011111 12456788899999864
No 151
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.23 E-value=1.4e-11 Score=80.52 Aligned_cols=80 Identities=15% Similarity=0.347 Sum_probs=56.1
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC-
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP- 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~- 79 (151)
|.+++.+|+|.|.|.+.|..+........|.|. ....+|.+...+ ....+..|+.+.|.|.+.+.++
T Consensus 75 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~----------~~~~~p~v~~~~--~~~~~~~~~~v~l~C~~~g~~p~ 142 (213)
T 3r06_A 75 ISSLESEDIGSYYCQQYYNYPWTFGPGTKLEIK----------RADAKPTVSIFP--PSSEQLGTGSATLVCFVNNFYPK 142 (213)
T ss_dssp ESSCCGGGCSEEEEEECSSSSCEECCCEEEEEC----------CCCBCCEEEEEC--CCHHHHTTTEEEEEEEEEEEBSS
T ss_pred ECCCCcccCEEEEEecccCCceEEcCCceEEEe----------ccCCCceeeeeC--CCceecCCCCcEEEEEEeeecCC
Confidence 578999999999999998765334445566652 123566665544 3344556888999999987554
Q ss_pred -CeEEEEeCCeeeEe
Q psy16421 80 -PSIMWRREGGEMIT 93 (151)
Q Consensus 80 -~~~~W~~~~~~~~~ 93 (151)
+.+.|++ +++.+.
T Consensus 143 ~~~v~W~k-~g~~l~ 156 (213)
T 3r06_A 143 DINVKWKV-DGSEKR 156 (213)
T ss_dssp CEEEEEEE-TTEEEC
T ss_pred ceEEEEEE-CCcccC
Confidence 4899999 666654
No 152
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.22 E-value=8.9e-11 Score=74.03 Aligned_cols=92 Identities=21% Similarity=0.273 Sum_probs=63.8
Q ss_pred CCeeEeCCCCCceEeecCCeEEEEeeecCCC-CCeEEEEeCCeeeEecccC-----------------------------
Q psy16421 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSP-PPSIMWRREGGEMITNSFN----------------------------- 97 (151)
Q Consensus 48 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~-~~~~~W~~~~~~~~~~~~~----------------------------- 97 (151)
+|.+...+ ....+.+|+++.|.|.+.+.+ .+.+.|++ ++..+.....
T Consensus 4 ~p~i~~~p--~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~-~g~~~~~~~~~~~~~~~~~~d~G~Y~C~~~~~~~s~~~~ 80 (170)
T 3ry4_A 4 KAVLKLEP--PWINVLQEDSVTLTCQGARSPESDSIQWFH-NGNLIPTHTQPSYRFKANNNDSGEYTCQTGQTSLSDPVH 80 (170)
T ss_dssp BCEEEEES--CCSEEETTCEEEEEEESCCCSSSSCEEEEE-TTEECTTCCSSEEEEECCGGGCEEEEEEETTSBCCCCEE
T ss_pred CCEEEeCC--CCeEEECCCcEEEEEEecCCCCcceEEEEE-CCeEcccCccceEEEecccccCeEEEEEEeCCCceEeEE
Confidence 34555544 456788999999999998876 67899999 5655443221
Q ss_pred --CCCCCeeeeCCceeEeecCCcEEEEeeec-ccCCCeeEEEcCCceec
Q psy16421 98 --NTVPPIVKIPSQLIGAHEGQQLVLECISE-AYPKSVNYWTREKGDMI 143 (151)
Q Consensus 98 --~~~~p~~~~~~~~~~~~~g~~~~l~C~~~-g~p~~~~~W~k~~~~~~ 143 (151)
+..++.+.. .....+.+|+.+.|.|.+. +.|.+.+.|+|+|..+.
T Consensus 81 l~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~ 128 (170)
T 3ry4_A 81 LTVLFEWLVLQ-TPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQK 128 (170)
T ss_dssp EEEECCSEEEE-CSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEE
T ss_pred EEEECCceEec-CCCceeecCCeEEEEEECCCCCCCceEEEEECCeEcc
Confidence 112232222 2344678999999999995 56678899999977653
No 153
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.22 E-value=3e-11 Score=78.32 Aligned_cols=86 Identities=26% Similarity=0.387 Sum_probs=62.3
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEe----------cc--cC----------------------------
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMIT----------NS--FN---------------------------- 97 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~----------~~--~~---------------------------- 97 (151)
..+.+.+|+++.|.|.+.+.|.+.+.|+++ +..+. .. .+
T Consensus 12 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~-~~~~~~~~~~~~~~~~~~~~r~~~~~~~L~i~~~~~~d~G~Y~C~~~~~ 90 (209)
T 1nbq_A 12 PEVRIPENNPVKLSCAYSGFSSPRVEWKFD-QGDTTRLVCYNNKITASYEDRVTFLPTGITFKSVTREDTGTYTCMVSEE 90 (209)
T ss_dssp SBCCEETTCCCEEECEEESCSSEEEEEEEE-ETTEEEESEETTEECTTTTTTCEEETTEEECSCCCTTSCSEEEEEEEET
T ss_pred CceEEEcCCCEEEEEEEeCCCCcEEEEEEc-CCceeEEEEecCccCccccCceEeeccEEEEeeCCHHHCcEEEEEEecC
Confidence 567788999999999999989999999994 33311 00 00
Q ss_pred -------------CCCCCeeeeCCceeEeecCCcEEEEeee-cccCCCeeEEEcCCceecc
Q psy16421 98 -------------NTVPPIVKIPSQLIGAHEGQQLVLECIS-EAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 -------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~~W~k~~~~~~~ 144 (151)
+..+|.+........+.+|+.+.|.|.+ .|.|.|.+.|+|++..+..
T Consensus 91 ~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~ 151 (209)
T 1nbq_A 91 GGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPT 151 (209)
T ss_dssp TSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCS
T ss_pred CCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCC
Confidence 1123333333334467899999999997 8999999999999876654
No 154
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.22 E-value=9.4e-11 Score=76.18 Aligned_cols=76 Identities=20% Similarity=0.360 Sum_probs=54.9
Q ss_pred CccccccCCeEEEEEEEcCCC----CCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC
Q psy16421 1 MTEVSREHMGAYLCIASNGVP----PSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~----~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g 76 (151)
|.+++++|+|.|+|.+.+... ...+..+.|.|. ....+|.+...+ . ..+.+|+++.|.|.+.+
T Consensus 67 I~~v~~~D~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~----------~~~~~p~i~~~p--~-~~v~~G~~v~L~C~~~~ 133 (201)
T 1nkr_A 67 ISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDIVII----------GLYEKPSLSAQP--G-PTVLAGENVTLSCSSRS 133 (201)
T ss_dssp ESSCCGGGCEEEEEEEEBTTBTTCCCCCCCCEEEEEE----------CSSCCCEEEEES--C-SEECTTCEEEEEEEESS
T ss_pred eccCCcccCeEEEEeEecCCCCccccCCCCCEEEEee----------ccCCCCceecCC--C-CccCCCCeEEEEEeCCC
Confidence 568899999999999987531 234556677664 122456776655 2 46789999999999987
Q ss_pred CCCCeEEEEeCCeee
Q psy16421 77 SPPPSIMWRREGGEM 91 (151)
Q Consensus 77 ~~~~~~~W~~~~~~~ 91 (151)
+.+.+.|+| +++.
T Consensus 134 -~~~~~~w~k-~g~~ 146 (201)
T 1nkr_A 134 -SYDMYHLSR-EGEA 146 (201)
T ss_dssp -CCSEEEEEE-TTCS
T ss_pred -CCceEEEEE-CCcc
Confidence 578899999 4443
No 155
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.22 E-value=1.4e-10 Score=85.46 Aligned_cols=77 Identities=18% Similarity=0.374 Sum_probs=47.0
Q ss_pred CccccccCCeEEEEEEEcCCC-----------C-CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeE
Q psy16421 1 MTEVSREHMGAYLCIASNGVP-----------P-SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNV 68 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~-----------~-~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~ 68 (151)
|.+++.+|+|.|.|.+.+..+ . .......|.|.. ....+|.+..... ......+++.+
T Consensus 84 I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~---------~~~~~P~i~~~~~-~~~~~~~~~~v 153 (512)
T 1zvo_C 84 LRSMSAADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSS---------APTKAPDVFPIIS-GCRHPKDNSPV 153 (512)
T ss_pred ECcCCHHHCEEEEEEEECCCCccccccccccccccccCceEEEecc---------cCCcCCeEEeccC-CcccccCCCeE
Confidence 678999999999999988642 0 112344565531 0113454432110 11102246899
Q ss_pred EEEeeecCC-CCC-eEEEEeC
Q psy16421 69 SMRCAASGS-PPP-SIMWRRE 87 (151)
Q Consensus 69 ~l~C~~~g~-~~~-~~~W~~~ 87 (151)
.|.|.+.+. |.+ .+.|+++
T Consensus 154 ~L~C~~~g~~P~p~~v~W~~~ 174 (512)
T 1zvo_C 154 VLACLITGYHPTSVTVTWYMG 174 (512)
T ss_pred EEEEEEEeeecCceEEEEEcC
Confidence 999999885 655 8999984
No 156
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.22 E-value=2.9e-11 Score=78.45 Aligned_cols=78 Identities=26% Similarity=0.503 Sum_probs=56.2
Q ss_pred CccccccCCeEEEEEEEcCCCC-CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeee-cCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP-SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA-SGSP 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~~ 78 (151)
|.+++.+|+|.|+|.+.|..+. ..+..+.|.|. .+|.+.... ....+.+|+.+.|.|.+ .+.|
T Consensus 72 i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~~l~V~-------------~~p~~~~~~--~~~~~~~g~~~~l~C~~~~~~p 136 (209)
T 1nbq_A 72 FKSVTREDTGTYTCMVSEEGGNSYGEVKVKLIVL-------------VPPSKPTVN--IPSSATIGNRAVLTCSEQDGSP 136 (209)
T ss_dssp CSCCCTTSCSEEEEEEEETTSSCEECCEEECCEE-------------BCCCCCCCC--CBSEEETTSCEEECCCCCSCBS
T ss_pred EeeCCHHHCcEEEEEEecCCCCccceEEEEEEEe-------------cCCcCCCcc--cccceecCCEEEEEEeCCCCCC
Confidence 6789999999999999998652 22333444443 445444333 34567889999999996 8999
Q ss_pred CCeEEEEeCCeeeEec
Q psy16421 79 PPSIMWRREGGEMITN 94 (151)
Q Consensus 79 ~~~~~W~~~~~~~~~~ 94 (151)
.+.+.|++ ++..+..
T Consensus 137 ~~~v~W~~-~~~~~~~ 151 (209)
T 1nbq_A 137 PSEYTWFK-DGIVMPT 151 (209)
T ss_dssp CCEEEEEE-TTCCCCS
T ss_pred CceeEEEE-CCeeCCC
Confidence 99999999 5555543
No 157
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.21 E-value=5.9e-11 Score=76.41 Aligned_cols=108 Identities=17% Similarity=0.212 Sum_probs=68.7
Q ss_pred CccccccCCeEEEEEEEcCCCC-CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP-SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++++|+|.|+|.+.|..+. ..+..+.|.|.. ...+|.+...+ ...+.+|+++.|.|.+.+ +.
T Consensus 61 I~~v~~~D~G~Y~C~~~~~~~~~~~s~~~~l~V~~----------~~~~p~i~~~p---~~~v~~G~~v~L~C~~~~-~~ 126 (188)
T 1oll_A 61 IPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTE----------MYDTPTLSVHP---GPEVISGEKVTFYCRLDT-AT 126 (188)
T ss_dssp ESSCCGGGCEEEEEEEEETTEECCCCCCEEEEEES----------CSCCCEEEEES---CSEEETTCEEEEEEECSS-SC
T ss_pred eCcCCcccCeEEEEEecCCCCCCCCCCceEEEecc----------cCCCCeEEECC---CCccccCCEEEEEEEcCC-CC
Confidence 5689999999999999886542 335566666641 12356665544 346789999999999876 46
Q ss_pred CeEEEEeCCeeeEecccC-CCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGEMITNSFN-NTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
+.+.|+++ +..+..... ......|.+ ..+...+.....|.+..
T Consensus 127 ~~~~w~k~-g~~~~~~~~~~~~~~~L~I----~~v~~~d~G~Y~C~a~n 170 (188)
T 1oll_A 127 SMFLLLKE-GRSSHVQRGYGKVQAEFPL----GPVTTAHRGTYRCFGSY 170 (188)
T ss_dssp SEEEEEEE-SSSCEEEEEECSSEEEEEE----EECCGGGCEEEEEECEE
T ss_pred CEEEEEEC-CccccccccCCCceeEEEE----CCCCcCCCcEEEEEEEc
Confidence 78999994 443321000 000111211 23456788899999764
No 158
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.21 E-value=1.6e-10 Score=73.52 Aligned_cols=100 Identities=18% Similarity=0.216 Sum_probs=67.1
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeee-cCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA-SGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~~~ 79 (151)
|.+++.+|+|.|+|.+.|..+ +..+.|.|. .++.....+ ...+.+|+.+.|.|.+ .+.|.
T Consensus 55 i~~v~~~d~G~Y~C~~~~~~~---s~~~~l~V~-------------~~~~~~~~~---~~~~~~g~~~~l~C~~~~~~p~ 115 (176)
T 1f2q_A 55 IVNAKFEDSGEYKCQHQQVNE---SEPVYLEVF-------------SDWLLLQAS---AEVVMEGQPLFLRCHGWRNWDV 115 (176)
T ss_dssp ECSCCGGGCEEEEEECTTSSC---CCCEEEEEE-------------CSSEEEEES---CSEEETTSCEEEEEEEGGGCCE
T ss_pred EeccceecCEEEEEEcCCccc---cccEEEEEe-------------CcceeecCC---cceeeCCCCEEEEEEecCCCCc
Confidence 568999999999999988543 455666653 333333322 3567799999999999 56777
Q ss_pred CeEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
+.+.|++ +++.+... .....+.+.. +...+.....|.+..
T Consensus 116 ~~~~W~~-~g~~~~~~---~~~~~L~i~~----v~~~d~G~Y~C~a~n 155 (176)
T 1f2q_A 116 YKVIYYK-DGEALKYW---YENHNISITN----ATVEDSGTYYCTGKV 155 (176)
T ss_dssp EEEEEEE-TTEECCSC---CCSSEEEESS----CCGGGCEEEEEEEEE
T ss_pred eEEEEEE-CCEEEeee---cCCCeEEECC----CCcccCEEEEEEEEe
Confidence 8999999 66665321 1122333332 345567789999864
No 159
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.21 E-value=6.7e-11 Score=77.83 Aligned_cols=85 Identities=18% Similarity=0.338 Sum_probs=62.9
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccC----------------------------------------
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFN---------------------------------------- 97 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~---------------------------------------- 97 (151)
....+.+|+++.|.|.+.+.|.+.+.|++ +++.+.....
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~ 105 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLK-NGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHT 105 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEE-TTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEE-CCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCccccc
Confidence 45678899999999999999999999999 5555432211
Q ss_pred ----C----CCCCeeee-CCceeEeecCCcEEEEeeecccCCCeeEEEc----CCceec
Q psy16421 98 ----N----TVPPIVKI-PSQLIGAHEGQQLVLECISEAYPKSVNYWTR----EKGDMI 143 (151)
Q Consensus 98 ----~----~~~p~~~~-~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k----~~~~~~ 143 (151)
+ ..+|.+.. .+....+.+|+.+.|.|.+.|.|.|.+.|+| +|..+.
T Consensus 106 ~~l~V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~ 164 (231)
T 3ojm_B 106 YHLDVVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYG 164 (231)
T ss_dssp EEEEEECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBC
T ss_pred EEEEEEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCcccc
Confidence 0 11223322 2456678899999999999999999999999 655443
No 160
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.20 E-value=2.6e-11 Score=79.14 Aligned_cols=80 Identities=18% Similarity=0.329 Sum_probs=54.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~~ 79 (151)
|.+++.+|+|.|.|.+.|..+........|.|.. ...+|.+...+ ......+|+.+.|.|.+.| .|.
T Consensus 74 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~----------~~~~P~v~~~~--~~~~~~~g~~v~l~C~~~g~~p~ 141 (210)
T 1lk3_L 74 IDPVEADDTAIYFCQQSWNGPLTFGAGTKLELKR----------ADAAPTVSIFP--PSTEQLATGGASVVCLMNNFYPR 141 (210)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC----------CCBCCEEEEEC--CCHHHHTTTEEEEEEEEEEEBSS
T ss_pred ECCCCHHHCeEEEEEEEcCCCceeCCCEEEEEcC----------CCcCCeEEEEC--CchhhccCCcEEEEEEEEeEeCC
Confidence 5789999999999999998763333344565531 12356665533 1223447999999999987 454
Q ss_pred C-eEEEEeCCeeeEe
Q psy16421 80 P-SIMWRREGGEMIT 93 (151)
Q Consensus 80 ~-~~~W~~~~~~~~~ 93 (151)
+ .+.|++ +++.+.
T Consensus 142 ~~~v~W~k-~g~~~~ 155 (210)
T 1lk3_L 142 DISVKWKI-DGTERR 155 (210)
T ss_dssp CCEEEEEE-TTEECC
T ss_pred ceEEEEEe-CCccCC
Confidence 3 899999 666654
No 161
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.19 E-value=7.7e-11 Score=79.88 Aligned_cols=60 Identities=23% Similarity=0.378 Sum_probs=26.0
Q ss_pred ccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEE
Q psy16421 4 VSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIM 83 (151)
Q Consensus 4 v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~ 83 (151)
..++|.+.|.|++.+..|... .. ....+...+ ..+.+.+|+++.|.|.+.+ +.+.+.
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~-~~-------------------~~~~v~~~p--~~v~v~~G~~v~L~C~~~~-~~~~v~ 59 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSG-GG-------------------GGMKVIQTP--RYLVKGQGQKAKMRCIPEK-GHPVVF 59 (270)
T ss_dssp ---------------------------------------------CCCEEEC--SEEEEETTSCEEEEEECCT-TCCEEE
T ss_pred chhhhHHHHHHHHhccCCccc-cc-------------------cceeEEeCC--CeEEEcCCCCEEEEEEecC-CCceEE
Confidence 468899999999998876321 11 112222223 4577889999999999866 778999
Q ss_pred EEe
Q psy16421 84 WRR 86 (151)
Q Consensus 84 W~~ 86 (151)
|++
T Consensus 60 W~k 62 (270)
T 3qib_D 60 WYQ 62 (270)
T ss_dssp EEE
T ss_pred EEE
Confidence 997
No 162
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.18 E-value=3.7e-11 Score=82.72 Aligned_cols=118 Identities=12% Similarity=0.144 Sum_probs=42.9
Q ss_pred eEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC-C--eEEEEe
Q psy16421 10 GAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP-P--SIMWRR 86 (151)
Q Consensus 10 G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~-~--~~~W~~ 86 (151)
|.|.|++... +......+.|.|.. ....+.+.. ....+.+|+.+.|.|.+.+..+ . .+.|++
T Consensus 61 ~~y~C~~~~~-~~~~~~~v~l~V~~----------~P~~v~I~~----~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~k 125 (291)
T 1mq8_A 61 SQPMCYSNCP-DGQSTAKTFLTVYW----------TPERVELAP----LPSWQPVGKNLTLRCQVEGGAPRANLTVVLLR 125 (291)
T ss_dssp CCCEEEEECS-SCEEEEECEEEECB----------CCSCCCBCC----CCSBCCSSCCCEEEEEECCCBSTTTEEEEEES
T ss_pred CeEEEEEEcC-CccEEEEEEEEEec----------CCCCCEEec----CCccccCCCCEEEEEEecCccCCCCcEEEEEE
Confidence 5799999644 33455555666641 112222222 2234778999999999877443 3 589999
Q ss_pred CCeeeEecccC---------------------------CC----C--------CC-eeee--CC-c------eeEeecCC
Q psy16421 87 EGGEMITNSFN---------------------------NT----V--------PP-IVKI--PS-Q------LIGAHEGQ 117 (151)
Q Consensus 87 ~~~~~~~~~~~---------------------------~~----~--------~p-~~~~--~~-~------~~~~~~g~ 117 (151)
+++.+..... .. . .+ .+.+ .+ . ...+.+|+
T Consensus 126 -g~~~l~~~~~~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~ 204 (291)
T 1mq8_A 126 -GEKELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDT 204 (291)
T ss_dssp -SSSEEEEEECCBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC--------------------
T ss_pred -CCEEeecccCCCCCceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCC
Confidence 5555442110 00 0 00 0100 11 0 11367899
Q ss_pred cEEEEeeecccCCC---eeEEEcCCceec
Q psy16421 118 QLVLECISEAYPKS---VNYWTREKGDMI 143 (151)
Q Consensus 118 ~~~l~C~~~g~p~~---~~~W~k~~~~~~ 143 (151)
.+.|+|.+.|.|++ .++|.++|+.+.
T Consensus 205 ~v~l~C~~~g~~P~~~~~v~w~~~g~~l~ 233 (291)
T 1mq8_A 205 QGTVVCSLDGLFPVSEAQVHLALGDQRLN 233 (291)
T ss_dssp -----------------------------
T ss_pred eEEEEEEcCCCCCCcccEEEEEECCEecC
Confidence 99999999997654 599999877664
No 163
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.18 E-value=4.1e-10 Score=70.92 Aligned_cols=99 Identities=20% Similarity=0.393 Sum_probs=66.3
Q ss_pred ccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeee-cCCCCC
Q psy16421 2 TEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA-SGSPPP 80 (151)
Q Consensus 2 ~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~~~~ 80 (151)
.+++.+|+|.|+|.+.|.. .+..+.|.|. .++.+...+ ...+.+|+.+.|.|.+ .+.|.+
T Consensus 56 ~~~~~~d~G~Y~C~~~~~~---~s~~~~l~v~-------------~~~~~~~~~---~~~~~~g~~~~l~C~~~~~~p~~ 116 (170)
T 3ry4_A 56 FKANNNDSGEYTCQTGQTS---LSDPVHLTVL-------------FEWLVLQTP---HLEFQEGETIMLRCHSWKDKPLV 116 (170)
T ss_dssp EECCGGGCEEEEEEETTSB---CCCCEEEEEE-------------CCSEEEECS---CSEECTTCCEEEEEEEGGGCCEE
T ss_pred EecccccCeEEEEEEeCCC---ceEeEEEEEE-------------CCceEecCC---CceeecCCeEEEEEECCCCCCCc
Confidence 4688999999999998753 3445666664 344444433 4567789999999998 556678
Q ss_pred eEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 81 SIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
.+.|++ ++..+.... ....+.+.. +...+.....|.+..
T Consensus 117 ~~~W~~-~g~~~~~~~---~~~~L~i~~----v~~~d~G~Y~C~a~n 155 (170)
T 3ry4_A 117 KVTFFQ-NGKSQKFSH---LDPTFSIPQ----ANHSHSGDYHCTGNI 155 (170)
T ss_dssp EEEEEE-TTEEEEEES---SCCEEEESS----CCGGGCEEEEEEEEE
T ss_pred eEEEEE-CCeEccccC---CCCeEEEEe----ccccCCEEEEEEEEe
Confidence 999999 566654311 122333322 345677789999853
No 164
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.18 E-value=4.4e-11 Score=81.62 Aligned_cols=78 Identities=15% Similarity=0.224 Sum_probs=60.4
Q ss_pred CccccccCCe-EEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMG-AYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G-~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++.+|+| .|+|.|.|..+...+..+.|.|. .....+|.+...+ ....+.+|+.+.|.|.+.|.|.
T Consensus 149 i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~---------~~~~~~P~i~~~~--~~~~v~~G~~v~l~C~~~g~p~ 217 (290)
T 2o26_X 149 IKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVR---------EAIKAIPVVSVPE--TSHLLKKGDTFTVVCTIKDVST 217 (290)
T ss_dssp EESCCGGGTTCEEEEEEEETTEEEECCCEEEEEE---------CCCCSCCEEECSC--SBCCCCTTCCEEEEEEEEESST
T ss_pred EecccHHHCCCEEEEEEEECCceEEeEEEEEEEE---------eCCCCCCccccCC--CcceEecCCcEEEEEEEecCCc
Confidence 4678999999 99999999865434556777764 1234678877665 4557889999999999999998
Q ss_pred Ce-EEEEeCCe
Q psy16421 80 PS-IMWRREGG 89 (151)
Q Consensus 80 ~~-~~W~~~~~ 89 (151)
|. +.|++++.
T Consensus 218 p~~i~W~~~~~ 228 (290)
T 2o26_X 218 SVNSMWLKMNP 228 (290)
T ss_dssp TCEEEEEEESS
T ss_pred ceeEEEecCCC
Confidence 86 99999543
No 165
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.18 E-value=1.1e-10 Score=75.54 Aligned_cols=101 Identities=14% Similarity=0.265 Sum_probs=62.1
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCC-eEEEEeeecCC-C
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGS-NVSMRCAASGS-P 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~-~~~l~C~~~g~-~ 78 (151)
|.+++.+|+|.|.|.+.+..+. ....+.|.|... ...|.+.... .....|. .+.|.|.+.+. |
T Consensus 74 I~~v~~~D~G~Y~C~~~~~~~~-~~~~~~L~V~~~----------~~~p~i~~~~----~~~~~g~~~v~L~C~~~g~~p 138 (193)
T 2if7_A 74 LSNLKMEDTGSYRAQISTKTSA-KLSSYTLRILRQ----------LRNIQVTNHS----QLFQNMTCELHLTCSVEDADD 138 (193)
T ss_dssp ECSCCGGGCEEEEEEEECSSCE-EEEEEEEEEECC----------CEEEEEEECC----C---CSSEEEEEEEEEESCCT
T ss_pred ECCCCcccCceEEEEEEecCCC-eEEEEEEEEEcc----------CCCCeEecCc----eeecCCCceEEEEEEEecCCC
Confidence 5789999999999999998773 344566666411 1123343322 1223455 89999999884 5
Q ss_pred CCeEEEEeCCeeeEecccCCCCCCeeeeCCceeEeec-CCcEEEEeeecc
Q psy16421 79 PPSIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHE-GQQLVLECISEA 127 (151)
Q Consensus 79 ~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-g~~~~l~C~~~g 127 (151)
.|.+.|++ +++.+... ..+.+. .... .+....+|.+..
T Consensus 139 ~p~i~W~~-~g~~l~~~------~~l~i~----~~~~~~d~G~Y~C~a~N 177 (193)
T 2if7_A 139 NVSFRWEA-LGNTLSSQ------PNLTVS----WDPRISSEQDYTCIAEN 177 (193)
T ss_dssp TCEEEEEE-TTEEEESS------SEEEEE----ECTTTCSCCEEEEEEEE
T ss_pred ceEEEEEe-CCEEcCCC------CeEEEE----eccCcCCCCcEEEEEEC
Confidence 89999999 56554321 122221 0112 257789999864
No 166
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.18 E-value=1.4e-10 Score=77.58 Aligned_cols=71 Identities=18% Similarity=0.293 Sum_probs=48.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~~ 79 (151)
|.+++.+|+|.|+|.+.+..+ .....+.|.|. .+|.+...+ . .....|+.+.|.|.+.| .|.
T Consensus 86 I~~v~~~D~G~Y~C~~~~~~~-~~~~~~~L~V~-------------~~P~v~~~~--~-~~~~~~~~~~L~C~~~g~~P~ 148 (248)
T 3pv7_A 86 LPGIQLEEAGEYRCEVVVTPL-KAQGTVQLEVV-------------ASPASRLLL--D-QVGMKENEDKYMCESSGFYPE 148 (248)
T ss_dssp ESSCCGGGCEEEEEEEEETTE-EEEEEEEEEEE-------------BCCEEEEEC--C---------CEEEEEEEEEBSS
T ss_pred eCCCCHHHCeEEEEEEEeCCc-cceeEEEEEEe-------------cCCceEEec--C-CccccCCCcEEEEEEccEECC
Confidence 578999999999999999866 34445555553 467666544 2 23446778889999988 788
Q ss_pred C-eEEEEeCC
Q psy16421 80 P-SIMWRREG 88 (151)
Q Consensus 80 ~-~~~W~~~~ 88 (151)
+ .+.|++++
T Consensus 149 pi~v~W~k~g 158 (248)
T 3pv7_A 149 AINITWEKQT 158 (248)
T ss_dssp CCEEEEEEEC
T ss_pred CeEEEEEECC
Confidence 8 99999943
No 167
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.17 E-value=4.4e-11 Score=78.39 Aligned_cols=80 Identities=14% Similarity=0.321 Sum_probs=53.2
Q ss_pred CccccccCCeEEEEEEEcCCC-CCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CC
Q psy16421 1 MTEVSREHMGAYLCIASNGVP-PSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SP 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~-~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~ 78 (151)
|.+++.+|+|.|.|.+.|..+ ........|.|. ....+|.+...+ ......+|+.+.|.|.+.| .|
T Consensus 76 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~----------~~~~~P~v~~~~--~~~~~~~g~~v~L~C~~~g~~P 143 (216)
T 2xzc_L 76 ITGLQTGDEADYYCGTWDSSLNPVFGGGTKLEIK----------RTVAAPSVFIFP--PSDEQLKSGTASVVCLLNNFYP 143 (216)
T ss_dssp ECSCCGGGCEEEEEEEECTTSCEEEBCCEEEEEC----------CCCBCCEEEEEC--CCHHHHHTTEEEEEEEEEEEBS
T ss_pred ECCCCcccCEEEEEEEEeCCCcceECCCEEEEEc----------CCCCCCceEEeC--CChhhccCCcEEEEEEEEeEcC
Confidence 578999999999999999865 122334455552 112456665433 1222346889999999987 55
Q ss_pred CC-eEEEEeCCeeeEe
Q psy16421 79 PP-SIMWRREGGEMIT 93 (151)
Q Consensus 79 ~~-~~~W~~~~~~~~~ 93 (151)
.+ .+.|++ +++.+.
T Consensus 144 ~~~~v~W~k-~g~~~~ 158 (216)
T 2xzc_L 144 REAKVQWKV-DNALQS 158 (216)
T ss_dssp SCCEEEEEE-TTEECC
T ss_pred CceEEEEEE-CCeecC
Confidence 54 899999 566654
No 168
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.17 E-value=7.1e-11 Score=77.44 Aligned_cols=76 Identities=16% Similarity=0.199 Sum_probs=50.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCC--
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSP-- 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~-- 78 (151)
|.+++.+|+|.|+|.|.|..+...+..+.|.|.. ..+|.+...+. ..+.+.+|+++.|.|.+.|.|
T Consensus 68 I~~v~~~D~G~Y~C~a~n~~~~~~s~~~~l~v~~-----------~~~p~~~~~~~-~~~~v~~G~~v~L~C~~~g~p~~ 135 (213)
T 2x1w_L 68 IPSYMISYAGMVFCEAKINDESYQSIMYIVVVVG-----------YRIYDVVLSPS-HGIELSVGEKLVLNCTARTELNV 135 (213)
T ss_dssp EEGGGTTTCSEEEEEEC----CEECCCEEEEECB-----------CCEEEEEEESC-SCEEEETTCCEEEEEEEEECTTB
T ss_pred EccCChhcCceEEEEEEECCeeEEEEEEEEEEeC-----------CcccceEEcCC-CCeEEcCCCCEEEEEEEECCCCC
Confidence 5688999999999999986553334445665531 12344444332 345888999999999998855
Q ss_pred CCeEEEEeCC
Q psy16421 79 PPSIMWRREG 88 (151)
Q Consensus 79 ~~~~~W~~~~ 88 (151)
.+.+.|++++
T Consensus 136 ~~~i~W~~~g 145 (213)
T 2x1w_L 136 GIDFNWEYPS 145 (213)
T ss_dssp CCEEEEECSC
T ss_pred ceEEEEEecC
Confidence 4579999944
No 169
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.17 E-value=1.2e-10 Score=76.58 Aligned_cols=75 Identities=23% Similarity=0.357 Sum_probs=55.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..+ .....+.|.|.. ....+|.+.... +....+.+|+.+.|.|.+.+.|.+
T Consensus 80 i~~~~~~d~G~Y~C~~~n~~~-~~~~~~~l~V~~---------~~~~~p~~~~~~-~~~~~~~~g~~~~l~C~~~~~p~p 148 (231)
T 3ojm_B 80 MESVVPSDKGNYTCVVENEYG-SINHTYHLDVVE---------RSRHRPILQAGL-PANASTVVGGDVEFVCKVYSDAQP 148 (231)
T ss_dssp ECSCCGGGCEEEEEEEEETTE-EEEEEEEEEEEC---------CCCCCCEECTTC-SCCEEEETTCCEEEECCEECSSCC
T ss_pred EecCCcccCEEEEEEEecccC-cccccEEEEEEc---------CCCCCCceeecc-CCceEEEeCCcEEEEEEEecCCCC
Confidence 468899999999999999877 445566666641 111233333221 246788899999999999999999
Q ss_pred eEEEEe
Q psy16421 81 SIMWRR 86 (151)
Q Consensus 81 ~~~W~~ 86 (151)
.+.|++
T Consensus 149 ~v~W~~ 154 (231)
T 3ojm_B 149 HIQWIK 154 (231)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999998
No 170
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.17 E-value=3.3e-10 Score=72.62 Aligned_cols=91 Identities=13% Similarity=0.096 Sum_probs=63.1
Q ss_pred CCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccC----------------------------
Q psy16421 46 SMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFN---------------------------- 97 (151)
Q Consensus 46 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~---------------------------- 97 (151)
..+|.+...+ . ..+.+|+++.|.|.+.+ +.+.+.|++++ ........
T Consensus 6 ~~~P~i~~~p--~-~~v~~G~~v~L~C~~~~-~~~~~~W~k~g-~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 80 (184)
T 2gi7_A 6 LPKPSLQALP--S-SLVPLEKPVTLRCQGPP-GVDLYRLEKLS-SSRYQDQAVLFIPAMKRSLAGRYRCSYQNGSLWSLP 80 (184)
T ss_dssp BCCCEEEEES--C-SEEETTCCEEEEEECST-TCSEEEEEETT-TCCEESSSEEEESSCCGGGCEEEEEEEEETTEEBCC
T ss_pred CCCCeEEeCC--C-ccccCCCcEEEEEeCCC-CCCEEEEEECC-ccccCcccEEEECcCChhhCceEEEEEEcCCCccCC
Confidence 4677777766 3 37889999999999988 78899999954 32111100
Q ss_pred -------C---CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceec
Q psy16421 98 -------N---TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMI 143 (151)
Q Consensus 98 -------~---~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~ 143 (151)
+ ..+|.+...+ ...+.+|+++.|.|.+.+.| +.+.|+|+|..+.
T Consensus 81 s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~~~-~~~~w~k~g~~~~ 134 (184)
T 2gi7_A 81 SDQLELVATGVFAKPSLSAQP-GPAVSSGGDVTLQCQTRYGF-DQFALYKEGDPAP 134 (184)
T ss_dssp CCCEEEEEESSSCCCEEEEEC-CCSSCCTTCEEEEEECSSCC-CEEEEEECCCCTT
T ss_pred CCCEEEEecCcCCCCEEEeCC-CceecCCCcEEEEEEcCCCC-cEEEEEECCCcCc
Confidence 0 1234444433 34567899999999987755 6899999976553
No 171
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.17 E-value=3.2e-11 Score=78.99 Aligned_cols=81 Identities=17% Similarity=0.378 Sum_probs=55.1
Q ss_pred CccccccCCeEEEEEEEcCCC----CCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC
Q psy16421 1 MTEVSREHMGAYLCIASNGVP----PSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~----~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g 76 (151)
|.+++.+|+|.|.|.+.|..+ ......+.|.|.. ....+|.+...+ .......|+.+.|.|.+.+
T Consensus 79 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~---------~~~~~P~~~~~~--~~~~~~~~~~v~L~C~~~g 147 (218)
T 3s96_B 79 ISNIQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLG---------QPKSTPTLTVFP--PSSEELKENKATLVCLISN 147 (218)
T ss_dssp ESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEES---------CCCBCCEEEEEC--CCHHHHHTTEEEEEEEEEE
T ss_pred EccCCcccCEEEEEEEecCCCCceeEEEcCcEEEEEec---------CCCCCceEEeeC--CCcccccCCcEEEEEEECc
Confidence 578999999999999999865 1233445666641 111456665433 2334456799999999987
Q ss_pred -CCCC-eEEEEeCCeeeEe
Q psy16421 77 -SPPP-SIMWRREGGEMIT 93 (151)
Q Consensus 77 -~~~~-~~~W~~~~~~~~~ 93 (151)
.|.+ .+.|++ +++.+.
T Consensus 148 ~~p~~~~v~W~k-~g~~l~ 165 (218)
T 3s96_B 148 FSPSGVTVAWKA-NGTPIT 165 (218)
T ss_dssp EBSSCCEEEEEE-TTEEC-
T ss_pred ccCCCeEEEEEE-CCEECc
Confidence 5666 899999 666654
No 172
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.16 E-value=3.7e-11 Score=79.58 Aligned_cols=80 Identities=15% Similarity=0.426 Sum_probs=56.1
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CC-
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SP- 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~- 78 (151)
|.+++.+|+|.|.|.+.+..+........|.|. ....+|.+...+ ......+|+.+.|.|.+.+ .|
T Consensus 98 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~----------~~~~~p~v~~~~--~~~~~~~g~~v~l~C~~~~~~p~ 165 (237)
T 3sob_L 98 ISSLQPEDFATYYCQQSYTTPPTFGQGTKVEIK----------RTVAAPSVFIFP--PSDEQLKSGTASVVCLLNNFYPR 165 (237)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEE----------CCCBCCEEEEEC--CCHHHHHHTEEEEEEEEEEEBSS
T ss_pred ECCCChhhCeEEEEeeccCCceEEcCcEEEEEe----------cCCCCCceEEeC--CChhhccCCceEEEEEEcccCCC
Confidence 578999999999999988765333445566663 123566665543 2334456889999999877 44
Q ss_pred CCeEEEEeCCeeeEe
Q psy16421 79 PPSIMWRREGGEMIT 93 (151)
Q Consensus 79 ~~~~~W~~~~~~~~~ 93 (151)
.+.+.|++ ++..+.
T Consensus 166 ~~~v~W~k-~g~~~~ 179 (237)
T 3sob_L 166 EAKVQWKV-DNALQS 179 (237)
T ss_dssp CCEEEEEE-TTEECC
T ss_pred ceEEEEEE-CCCCCC
Confidence 58999999 565544
No 173
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.16 E-value=7.8e-11 Score=81.22 Aligned_cols=84 Identities=23% Similarity=0.404 Sum_probs=58.2
Q ss_pred CccccccCCeEEEEEEE-cCCCCCCc--cceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC
Q psy16421 1 MTEVSREHMGAYLCIAS-NGVPPSVS--KRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~-~~~~~~~~--~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~ 77 (151)
|.+++.+|+|.|+|.|. |..|.... ..+.+.+.. .....+|.+...+. ..+.+.+|+.+.|.|.+.|.
T Consensus 166 i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~--------~~~~~~P~~~~~~~-~~~~~~~g~~v~l~C~~~g~ 236 (315)
T 1itb_B 166 VMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLE--------ENKPTRPVIVSPAN-ETMEVDLGSQIQLICNVTGQ 236 (315)
T ss_dssp ESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEEC--------CCCCCCCEECSCCS-EEEECCSSSCEEEEEEEEEC
T ss_pred EEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEec--------CCCCCCCEEecCCC-CcEEEeCCCcEEEEEEEecC
Confidence 56889999999999999 77774322 222222210 01135677765441 23567899999999999999
Q ss_pred CCCeEEEEeCCeeeEec
Q psy16421 78 PPPSIMWRREGGEMITN 94 (151)
Q Consensus 78 ~~~~~~W~~~~~~~~~~ 94 (151)
|.|.+.|++ ++..+..
T Consensus 237 P~p~i~W~~-~g~~i~~ 252 (315)
T 1itb_B 237 LSDIAYWKW-NGSVIDE 252 (315)
T ss_dssp TTSEEEEEE-TTEECCT
T ss_pred CCCeeEEEE-CCEECCc
Confidence 999999999 6666554
No 174
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.16 E-value=2.1e-10 Score=76.08 Aligned_cols=75 Identities=24% Similarity=0.379 Sum_probs=55.6
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..+ .....+.|.|.. ....+|.+.... .....+.+|+.+.|.|.+.+.|.+
T Consensus 76 i~~v~~~d~G~Y~C~~~~~~~-~~~~~~~l~V~~---------~~~~~~~~~~~~-~~~~~~~~g~~v~L~C~~~~~p~p 144 (241)
T 3grw_A 76 MESVVPSDRGNYTCVVENKFG-SIRQTYTLDVLE---------RSPHRPILQAGL-PANQTAVLGSDVEFHCKVYSDAQP 144 (241)
T ss_dssp ECSCCGGGCEEEEEEEEETTE-EEEEEEEEEEEC---------CCCCCCEEEECT-TCSEECCTTCCEEEEEEEECSSCC
T ss_pred EEeCCcccCEEEEEEEeecCC-ceEEEEEEEEec---------cCCCCceeecCC-CccceecCCCEEEEEEEEecCCCC
Confidence 467899999999999999877 445556666641 111234443322 146678889999999999999999
Q ss_pred eEEEEe
Q psy16421 81 SIMWRR 86 (151)
Q Consensus 81 ~~~W~~ 86 (151)
.+.|++
T Consensus 145 ~v~W~~ 150 (241)
T 3grw_A 145 HIQWLK 150 (241)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999998
No 175
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.16 E-value=3.1e-10 Score=74.01 Aligned_cols=106 Identities=19% Similarity=0.301 Sum_probs=64.3
Q ss_pred CccccccCCeEEEEEEEcCCCCC---CccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPS---VSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~ 77 (151)
|.+++.+|+|.|.|.+.+..+.. ....+.|.|.. ...+|.+.. + . .+.+|+.+.|.|.+.+.
T Consensus 86 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~----------~~~~p~i~~-~--~--~~~~G~~v~L~C~~~~~ 150 (214)
T 2zg1_A 86 IGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTA----------LIEKPDIHF-L--E--PLESGRPTRLSCSLPGS 150 (214)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEEC----------CCCCCEEC-----C--CCCTTCCEEEEEECTTC
T ss_pred EccCCHhhCceEEEEEEcCCCceeeecCCceEEEEec----------CCCCCceec-C--c--cccCCCeEEEEEEeccC
Confidence 57899999999999999876321 12456666641 122455433 2 1 25689999999999774
Q ss_pred ----CCCeEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 78 ----PPPSIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 78 ----~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
|.|.+.|+++ +....... ......+.+.. +...+....+|.+..
T Consensus 151 ~~~~p~p~v~W~~~-~~~~~~~~-~~~~~~L~i~~----~~~~~~g~Y~C~a~n 198 (214)
T 2zg1_A 151 CEAGPPLTFSWTGN-ALSPLDPE-TTRSSELTLTP----RPEDHGTNLTCQMKR 198 (214)
T ss_dssp CSCSSCCEEEEESS-TTSSSCSS-CCCSSEEEECC----CTTCCSCEEEEEEEC
T ss_pred CCCCCCceEEEeCC-CCccCCCC-ceeEEEEEEec----ccHHcCcEEEEEEEe
Confidence 7899999994 43211100 11111222221 234555689999865
No 176
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.16 E-value=1.5e-10 Score=75.12 Aligned_cols=108 Identities=21% Similarity=0.291 Sum_probs=65.8
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|.|.+.+..+........+.+. ..++...... ....+.+|+.+.+.|.+.+.|.|
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~--~~~~~~~~~~~~~~c~~~g~p~p 148 (218)
T 4frw_A 83 LRNAVQADEGEYECRVSTFPAGSFQARLRLRVL------------VPPLPSLNPG--PALEEGQGLTLAASCTAEGSPAP 148 (218)
T ss_dssp ESSCCGGGCEEEEEEEEEETTEEEEEEEEEEEE------------BCCCCEEEEC--SCEETTCCSEEEEEEEEEEBSCC
T ss_pred EeeccHHHCCceeEEEEeccCceeeeEEEEEEe------------eeccceeeee--eeeeeeeccccceeeeccCCcCc
Confidence 568999999999999988765333333333322 1122222222 34566789999999999999999
Q ss_pred eEEEEeCCeeeEecccCCCCCC------eeeeCCceeEeecCCcEEEEeeecc
Q psy16421 81 SIMWRREGGEMITNSFNNTVPP------IVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~~~~~p------~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
.+.|++ +++.+.........- .+.+. .+...+...++|.|..
T Consensus 149 ~i~W~~-~~~~~~~~~~~~~~~~~~~~s~L~i~----~~~~~d~g~YtC~a~N 196 (218)
T 4frw_A 149 SVTWDT-EVKGTTSSRSFKHSRSAAVTSEFHLV----PSRSMNGQPLTCVVSH 196 (218)
T ss_dssp EEEEEE-SSCCEEEEEEEECSSSEEEEEEEEEC----CCGGGTTCEEEEEEEC
T ss_pred eEEEEE-CCcccccCceEecCCcEEEEEEEEEe----eCCHHhCeEEEEEEEe
Confidence 999999 454443222111000 11111 1345667789999864
No 177
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.16 E-value=2.4e-10 Score=73.89 Aligned_cols=89 Identities=15% Similarity=0.187 Sum_probs=61.7
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecc-------cC----------------------
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNS-------FN---------------------- 97 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~-------~~---------------------- 97 (151)
.+|.+...+ .. .+.+|+++.|.|.+.+ +.+.+.|+++ +..+... ..
T Consensus 4 ~~P~i~~~p--~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~-g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 78 (196)
T 3p2t_A 4 PKPTLWAEP--GS-VISWGNSVTIWCQGTL-EAREYRLDKE-ESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYR 78 (196)
T ss_dssp CCCEEEEES--CS-EEETTCCEEEEEECCT-TCCEEEEEET-TSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEccC--CC-cCCCCCcEEEEeeCCC-CCCEEEEEEC-CCCCcccccccccCCceEEEEeccCCcccCceEEEEEe
Confidence 467776666 34 7889999999999988 7789999994 4433210 00
Q ss_pred ---------------C---CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCcee
Q psy16421 98 ---------------N---TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDM 142 (151)
Q Consensus 98 ---------------~---~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~ 142 (151)
+ ..+|.+...+.. .+.+|+++.|.|.+.+. ++.+.|+|+|..+
T Consensus 79 n~~g~~~~s~~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~ 139 (196)
T 3p2t_A 79 SPVGWSQPSDPLELVMTGAYSKPTLSALPSP-LVTSGKSVTLLCQSRSP-MDTFLLCKERAAH 139 (196)
T ss_dssp ETTEEBCCCCCEEEEEECSSCCCEEEEESCS-EECTTCCEEEEEEEEEE-EEEEEEEETTCCC
T ss_pred CCCcccCCCccEEEEecCCCCCCEEEeCCcc-eecCCCeEEEEEecCCC-CCEEEEEeCCCcc
Confidence 0 113344433332 57899999999999884 4689999997644
No 178
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.15 E-value=1.9e-10 Score=79.42 Aligned_cols=106 Identities=12% Similarity=0.120 Sum_probs=66.4
Q ss_pred ccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC-
Q psy16421 2 TEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP- 80 (151)
Q Consensus 2 ~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~- 80 (151)
..+..+|.|.|+|.|.|..+. ......+. +.+..+|.+...+. ....+.+|+.+.|.|.+.|+|.|
T Consensus 182 ~~~~~~d~g~Y~C~a~n~~~~-~~~~~~~~-----------l~V~~~P~v~~~~~-~~~~~~~g~~v~l~C~~~g~P~p~ 248 (313)
T 4fqp_A 182 VPSSQVDGKNVTCKVEHESFE-KPQLLTVN-----------LTVYYPPEVSISGY-DNNWYLGQNEATLTCDARSNPEPT 248 (313)
T ss_dssp CCCGGGTTCEEEEEEECTTSS-SCEEEEEE-----------CCBCEEEEEEEECC-CSCEETTCCCEEEEEEEEEESCCC
T ss_pred cccccccCeeEEEEEEccCcC-ccceeeee-----------cccccCCccccccc-cceeecCCCeEEEEEEecCCCCCc
Confidence 456778999999999998663 22222222 33445677654432 34556678999999999999988
Q ss_pred eEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeec
Q psy16421 81 SIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISE 126 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 126 (151)
.+.|++ +++.+.... ...-..+.+. .+...+.....|.|.
T Consensus 249 ~v~W~~-~~~~l~~~~-~~~~~~L~i~----~v~~~d~G~Y~C~a~ 288 (313)
T 4fqp_A 249 GYNWST-TMGPLPPFA-VAQGAQLLIR----PVDKPINTTLICNVT 288 (313)
T ss_dssp EEEEEE-TTBSCCTTE-EEETTEEEEC----CCSSCCEEEEEEEEE
T ss_pred EEEEEE-CCEECCCce-EEeCCEEEEC----cCChhhCEEEEEEEE
Confidence 599999 454433211 0011122222 234567778889875
No 179
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.14 E-value=5.1e-10 Score=72.75 Aligned_cols=39 Identities=18% Similarity=0.356 Sum_probs=33.4
Q ss_pred CCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 107 PSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 107 ~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
.+....+.+|+.+.|.|.+.|.|.|.+.|+|+|..+..+
T Consensus 123 ~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~ 161 (212)
T 2r15_A 123 LPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQT 161 (212)
T ss_dssp CCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCC
T ss_pred CCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccC
Confidence 355678899999999999999999999999998776543
No 180
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.14 E-value=2.2e-10 Score=73.72 Aligned_cols=96 Identities=13% Similarity=0.178 Sum_probs=62.2
Q ss_pred CccccccCCeEEEEEEEcCCCCCC-ccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSV-SKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~-~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++++|+|.|+|.+.|..|... ...+.|.|. ....+|.+.. .+..+.|.|.+.+.|.
T Consensus 70 I~~v~~~DsG~Y~c~~~n~~g~~~~~~~~~L~V~----------~~~~~P~i~~----------~~~~v~L~C~~~~~p~ 129 (182)
T 1hnf_A 70 IKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQ----------ERVSKPKISW----------TCINTTLTCEVMNGTD 129 (182)
T ss_dssp ECSCCGGGCEEEEEEEEETTSCEEEEEEEEEEEE----------CCCCCCEEEE----------ETTTTEEEEECSSCSS
T ss_pred ECCCChhhCEEEEEEEEeCCCceeEEEEEEEEEc----------CcCCCCEEEE----------ccCcEEEEeEccCCCC
Confidence 678999999999999999877432 244556653 1112333322 2347999999998889
Q ss_pred CeEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
+.+.|++ +++.+.. . ...+.. .....+.....|.+..
T Consensus 130 ~~~~W~~-~g~~l~~-~----~~~i~~-----~~~~~d~G~Y~C~a~N 166 (182)
T 1hnf_A 130 PELNLYQ-DGKHLKL-S----QRVITH-----KWTTSLSAKFKCTAGN 166 (182)
T ss_dssp CEEEEEE-SSCEEEE-E----SSCEEE-----ECCSCEEEEEEEEEEC
T ss_pred CEEEEEE-CCEECCC-C----CcEEEE-----ecccCCCcEEEEEEEe
Confidence 9999999 5666521 1 011111 1124667889999864
No 181
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.14 E-value=1.9e-10 Score=77.62 Aligned_cols=72 Identities=18% Similarity=0.294 Sum_probs=53.3
Q ss_pred CccccccCCeEEEEEEEcCCCC----CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP----SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~----~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g 76 (151)
|.+++++|+|.|.|.+.|..+. .....+.|.| ..+|.+...+ ..+.+.+|+++.|.|.+.+
T Consensus 83 I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V-------------~~~~~v~~~p--~~~~v~~G~~v~L~C~~~~ 147 (256)
T 1nqb_A 83 LSSLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTV-------------SSDIELTQTP--LSLPVSLGDQASISCRSSQ 147 (256)
T ss_dssp ECSCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEE-------------CCCCCEEEEC--SEEEECTTCCEEEEEEESS
T ss_pred ECcCChhhCEEEEEEEeeccCccceeEEcCceeeee-------------cccccEEecC--cEEEEecCCcEEEEeEecC
Confidence 5789999999999999998652 1122344444 3455555544 5677889999999999999
Q ss_pred CCCC-----eEEEEeC
Q psy16421 77 SPPP-----SIMWRRE 87 (151)
Q Consensus 77 ~~~~-----~~~W~~~ 87 (151)
.+.+ .+.|++.
T Consensus 148 ~~~~~~~~~~v~W~k~ 163 (256)
T 1nqb_A 148 SIVHSNGNTYLEWYLQ 163 (256)
T ss_dssp CCBCTTSCBCEEEEEE
T ss_pred cccccccceEEEEEEE
Confidence 8765 8999993
No 182
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.13 E-value=9.2e-11 Score=76.98 Aligned_cols=111 Identities=19% Similarity=0.365 Sum_probs=64.6
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeee-cCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA-SGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~~~ 79 (151)
|.+++.+|+|.|+|.+.+.. ..+..+.|.|. ....+|.+...+ ...+.+|+.+.|.|.+ .+.|.
T Consensus 76 I~~v~~~D~G~Y~C~~~~~~--~~~~~~~l~V~----------~~~~~p~i~~~~---~~~v~~G~~~~l~C~~~~g~P~ 140 (222)
T 4i0k_A 76 LQRVRVTDEGSYTCFVSIQD--FDSAAVSLQVA----------APYSKPSMTLEP---NKDLRPGNMVTITCSSYQGYPE 140 (222)
T ss_dssp ECSCCGGGCSCEEEEEEECC--CCCCCCCCCCC----------BCCCCCEEECCC--------CCSEEEEEEEEEEEBSC
T ss_pred ECCcccccCEEEEEEEEeCC--CceEEEEEEEE----------cCCCCCcEEeCC---CceecCCceEEEEEecccccCC
Confidence 56899999999999999863 23344444442 112345555543 3356789999999998 88999
Q ss_pred CeEEEEeCCeeeEecccC---C-CCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGEMITNSFN---N-TVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~---~-~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
+.+.|++.++..+..... . ...-.+.. .....+...+.....|.+..
T Consensus 141 ~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~-l~i~~v~~~d~G~Y~C~a~n 191 (222)
T 4i0k_A 141 AEVFWKDGQGVPLTGNVTTSQMANERGLFDV-HSVLRVVLGANGTYSCLVRN 191 (222)
T ss_dssp CEEEEECTTSCBCCSEEEEEEEECTTSCEEE-EEEEEEECCTTCEEEEEEEE
T ss_pred CeEEEEcCCCccCCCCcceeEEcCCCCeEEE-EEEEEEEeCCCCEEEEEEEC
Confidence 999999855544321110 0 00000000 01123455667789999864
No 183
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.13 E-value=8.7e-10 Score=81.30 Aligned_cols=30 Identities=10% Similarity=0.328 Sum_probs=23.6
Q ss_pred cCCcEE-EEeeecccCCC--eeEEEcCCceecc
Q psy16421 115 EGQQLV-LECISEAYPKS--VNYWTREKGDMIA 144 (151)
Q Consensus 115 ~g~~~~-l~C~~~g~p~~--~~~W~k~~~~~~~ 144 (151)
.|+.+. |.|.+.|.+++ .+.|+|||..+..
T Consensus 414 ~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~ 446 (512)
T 1zvo_C 414 PPEAASWLLCEVSGFSPPNILLMWLEDQREVNT 446 (512)
T ss_pred CCCCceEEEEEEeeeCCCCcEEEEEECCeECcC
Confidence 588899 99999995443 4899999876643
No 184
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.13 E-value=7.4e-10 Score=72.24 Aligned_cols=87 Identities=18% Similarity=0.253 Sum_probs=58.6
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEeCC-e-e----------------------------eEeccc------C----
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRREG-G-E----------------------------MITNSF------N---- 97 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~-~-~----------------------------~~~~~~------~---- 97 (151)
..+.+.+|+++.|.|.+.+.+.+.+.|++.+ + . .+.... +
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 88 (213)
T 3r06_A 9 SSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSYYC 88 (213)
T ss_dssp SEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEE
T ss_pred CEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEEEE
Confidence 4577889999999999999889999999722 0 0 010000 0
Q ss_pred -----------------C---CCCCeeeeCCceeEeecCCcEEEEeeecccCCC--eeEEEcCCceecc
Q psy16421 98 -----------------N---TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKS--VNYWTREKGDMIA 144 (151)
Q Consensus 98 -----------------~---~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~--~~~W~k~~~~~~~ 144 (151)
+ ..+|.+...+.......|+.+.|.|.+.|.|++ .++|+|+|..+..
T Consensus 89 ~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 157 (213)
T 3r06_A 89 QQYYNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRD 157 (213)
T ss_dssp EECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred ecccCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCC
Confidence 1 233444443333334568889999999986653 7999999876653
No 185
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.13 E-value=3.6e-11 Score=79.63 Aligned_cols=80 Identities=16% Similarity=0.375 Sum_probs=44.9
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC-CC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS-PP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-~~ 79 (151)
|.+++.+|+|.|.|.+.|..+........|.|.. ...+|.+...+ ......+|+.+.|.|.+.|. |.
T Consensus 97 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~----------~~~~p~v~~~~--~~~~~~~g~~v~L~C~~~g~~p~ 164 (233)
T 3bqu_C 97 IENMLSEDVADYYCLQSDNLPYTFGGGTNLEIKR----------ADAAPTVSIFP--PSSEQLTSGGASVVCFLNNFYPK 164 (233)
T ss_dssp -----CCCCSEEEEEECSSSSCCBCCCCBC---C----------CCBCCEEEEEC--CCHHHHHTTEEEEEEEEEEEBSS
T ss_pred ECCCCHHHCEEEEEEEecCCceeecCCEEEEEeC----------CCCCCEEEEeC--CCHHhhcCCceEEEEEEccccCC
Confidence 6789999999999999987653333333444421 11356665533 22233479999999999884 44
Q ss_pred C-eEEEEeCCeeeEe
Q psy16421 80 P-SIMWRREGGEMIT 93 (151)
Q Consensus 80 ~-~~~W~~~~~~~~~ 93 (151)
+ .+.|++ +++.+.
T Consensus 165 ~~~v~W~k-~g~~~~ 178 (233)
T 3bqu_C 165 DINVKWKI-DGSERQ 178 (233)
T ss_dssp CEEEEEEE-C-----
T ss_pred ceEEEEEE-CCeeCC
Confidence 3 799999 566554
No 186
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.13 E-value=2.9e-10 Score=75.52 Aligned_cols=78 Identities=19% Similarity=0.323 Sum_probs=54.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCC--
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSP-- 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~-- 78 (151)
|.+++.+|+|.|.|.+.|..+........|.|...... ..++.+...+ ....+.+|+++.|.|.+.+.+
T Consensus 79 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~-------~~~~~~~~~~--~~~~v~~G~~v~L~C~~~g~p~~ 149 (240)
T 1moe_A 79 IDPVEADDVATYYCQQTNEDPYTFGGGTKLEIKGGGSG-------GGGEVQLQQS--GAELVEPGASVKLSCTASGFNIK 149 (240)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECCCSCC-------CCCCCEEEEC--CCEEECTTCCEEEEEEEESSCGG
T ss_pred EcCCChhhCEEEEEEEccCCceeecCCEEEEEecCCCC-------CCceEEEeCC--CceEEeCCCcEEEEEEEcCccCC
Confidence 57899999999999999986643445566666421000 0122233333 456788999999999998877
Q ss_pred CCeEEEEeC
Q psy16421 79 PPSIMWRRE 87 (151)
Q Consensus 79 ~~~~~W~~~ 87 (151)
.+.+.|++.
T Consensus 150 ~~~v~W~k~ 158 (240)
T 1moe_A 150 DTYMHWVKQ 158 (240)
T ss_dssp GSCEEEEEE
T ss_pred CCEEEEEEE
Confidence 468999994
No 187
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.12 E-value=6.4e-10 Score=73.38 Aligned_cols=91 Identities=15% Similarity=0.049 Sum_probs=64.7
Q ss_pred CCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEe----------ccc--C----------------
Q psy16421 46 SMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMIT----------NSF--N---------------- 97 (151)
Q Consensus 46 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~----------~~~--~---------------- 97 (151)
..+|.+...+ . ..+.+|++++|.|.+.+ +.+.+.|+| +++.+. ... .
T Consensus 7 ~~~P~i~~~p--~-~~v~~G~~vtL~C~~~~-~~~~~~W~k-~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 81 (218)
T 1uct_A 7 FPMPFISAKS--S-PVIPLDGSVKIQCQAIR-EAYLTQLMI-IKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQC 81 (218)
T ss_dssp SCCCCEEESS--C-SEEETTCCEEEEECCCT-TCSEEEEEE-EETTEEEECSEECC----CCCEEEECSCCGGGCEEEEE
T ss_pred CCCCEEEecC--C-CccCCCCCEEEEEEcCC-CCCEEEEEE-CCCcccccccccCCCCcceeeEEEEcccccccCEEEEE
Confidence 4678888776 3 47889999999999987 688999999 443321 001 1
Q ss_pred ------------------C---CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCcee
Q psy16421 98 ------------------N---TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDM 142 (151)
Q Consensus 98 ------------------~---~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~ 142 (151)
+ ..+|.+...+ ...+.+|+++.|.|.+.+.|.+.+.|+|+|..+
T Consensus 82 ~a~n~~~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~ 146 (218)
T 1uct_A 82 QYRIGHYRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELS 146 (218)
T ss_dssp EEEETTTEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSS
T ss_pred EEEcCCCceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCcc
Confidence 0 1234444433 346789999999998778888899999997654
No 188
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.12 E-value=1.9e-10 Score=76.81 Aligned_cols=84 Identities=14% Similarity=0.215 Sum_probs=53.3
Q ss_pred CccccccCCeEEEEEEEcCCCC-CCccceEEEEeccccce-eEEe-ecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP-SVSKRIMLIVQCQYFSK-LYIY-TSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~~~~~~-~~~~-~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~ 77 (151)
|.+++.+|+|.|+|.+.|..+. .......|.|....... ...+ ....++.+...+ ..+.+.+|+++.|.|.+.+.
T Consensus 85 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~G~~v~L~C~~~~~ 162 (247)
T 2ghw_B 85 MNSLRAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSP--ATLSLSPGERATLSCRASQS 162 (247)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEEC--SEEEECTTSCEEEEEEESSC
T ss_pred ECcCCHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccC--CEEEecCCCcEEEEEEeCCC
Confidence 5789999999999999997321 12233456554210000 0000 001234444444 45678899999999999999
Q ss_pred CCCeEEEEe
Q psy16421 78 PPPSIMWRR 86 (151)
Q Consensus 78 ~~~~~~W~~ 86 (151)
+.+.+.|++
T Consensus 163 ~~~~v~W~k 171 (247)
T 2ghw_B 163 VRSNLAWYQ 171 (247)
T ss_dssp CTTCEEEEE
T ss_pred ccceEEEEE
Confidence 989999998
No 189
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.11 E-value=6.5e-10 Score=70.88 Aligned_cols=102 Identities=16% Similarity=0.277 Sum_probs=66.0
Q ss_pred cccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCC-CCeEE
Q psy16421 5 SREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSP-PPSIM 83 (151)
Q Consensus 5 ~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~-~~~~~ 83 (151)
+.+|+|.|+|.+.|. ....+.|.| ..+|.+...+ ....+.+|+.+.|.|.+.|.| .+.+.
T Consensus 57 ~~~d~G~Y~C~~~n~----~~~~~~l~V-------------~~~P~~~~~~--~~~~~~~g~~~~l~C~~~g~p~~~~i~ 117 (184)
T 3b5h_A 57 SDDQWGEYSCVFLPE----PMGTANIQL-------------HGPPRVKAVK--SSEHINEGETAMLVCKSESVPPVTDWA 117 (184)
T ss_dssp GGGCCEEEEEEEEST----TSCEEEEEE-------------CCSCCCEESC--SEEEECTTSCEEEEEECCCSSCCCEEE
T ss_pred chhhCeEEEEEEECC----cCcEEEEEE-------------ecCCceeecC--CCcEEcCCCcEEEEEEECCCCCCCeEE
Confidence 478999999999982 234455555 3677777665 456788999999999999999 79999
Q ss_pred EEe---CCeeeEecccCCCCCCeeeeC-----CceeEee-cCCcEEEEeeecc
Q psy16421 84 WRR---EGGEMITNSFNNTVPPIVKIP-----SQLIGAH-EGQQLVLECISEA 127 (151)
Q Consensus 84 W~~---~~~~~~~~~~~~~~~p~~~~~-----~~~~~~~-~g~~~~l~C~~~g 127 (151)
|++ ++...+.... ...-.+... .....+. ..+.....|.+..
T Consensus 118 W~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~N 168 (184)
T 3b5h_A 118 WYKITDSEDKALMNGS--ESRFFVSSSQGRSELHIENLNMEADPGQYRCNGTS 168 (184)
T ss_dssp EEECCSSSCEECCTTG--GGTEEEEEETTEEEEEECSCCTTTSSEEEEEEEEE
T ss_pred EEEcCCCCCEEeecCC--CCEEEEEecCCeeEEEEeeccccccCceEEEEEEe
Confidence 999 4444332111 000011100 0111244 5788899999863
No 190
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.11 E-value=8.8e-11 Score=77.10 Aligned_cols=79 Identities=19% Similarity=0.450 Sum_probs=53.1
Q ss_pred CccccccCCeEEEEEEEcCCCC---CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP---SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG- 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~---~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g- 76 (151)
|.+++.+|+|.|.|.+.|..+. .....+.|.|.. ....+|.+...+ ....+.+|+.+.|.|.+.|
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~---------~~~~~P~i~~~~--~~~~~~~g~~v~L~C~~~g~ 151 (219)
T 1c1e_H 83 INNLKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSS---------AKTTPPSVYPLA--PGSAAQTNSMVTLGCLVKGY 151 (219)
T ss_dssp ECSCCGGGCEEEEEEEEETTTTEEEEECCCEEEEECC---------CCCBCCEEEEEC--CCSSSCCSSEEEEEEEEEEE
T ss_pred ECCCCcccCEEEEEEEeccCcccceeecCceEEEEec---------CCCCCCeEEEec--CccccccCCeEEEEEEcccc
Confidence 5789999999999999997631 122345565541 011235544322 1224567999999999988
Q ss_pred CCCC-eEEEEeCCeee
Q psy16421 77 SPPP-SIMWRREGGEM 91 (151)
Q Consensus 77 ~~~~-~~~W~~~~~~~ 91 (151)
.|.| .+.|+++ +..
T Consensus 152 ~P~p~~v~W~~~-g~~ 166 (219)
T 1c1e_H 152 FPEPVTVTWNSG-SLS 166 (219)
T ss_dssp BSSCCEEEEGGG-TBC
T ss_pred cCCCeEEEEEeC-Ccc
Confidence 8888 9999994 443
No 191
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.11 E-value=4.9e-11 Score=77.90 Aligned_cols=116 Identities=16% Similarity=0.261 Sum_probs=67.5
Q ss_pred CccccccCCeEEEEEEEcCCCCC--CccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC-
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPS--VSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS- 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~--~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~- 77 (151)
|.+++.+|+|.|+|.+.|..+.. ......|.|. .....+|.+...+ ....+.+|+.+.|.|.+.|.
T Consensus 73 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~~~l~V~---------~~~~~~p~v~~~~--~~~~~~~g~~v~L~C~~~g~~ 141 (212)
T 1nfd_E 73 ISGAQPEDEAAYYCLSSYGDNNDLVFGSGTQLTVL---------RGPKSSPKVTVFP--PSPEELRTNKATLVCLVNDFY 141 (212)
T ss_dssp ETTCCGGGCSEEEEEEEETTTTEEEECCCEEEEEE---------CCCCBCCEEECCC--CCHHHHHTTEECCCEEEEEEB
T ss_pred ECcCCcccCEEEEEEEEcccCcccccCCceEEEEc---------cCCCCCCEEEeeC--CchHhccCCceEEEEEEEeeE
Confidence 57899999999999999732211 1233455553 1112456665533 23344579999999999886
Q ss_pred CC-CeEEEEeCCeeeEecccCCC----CCCeeee--CCceeEeecCCcEEEEeeeccc
Q psy16421 78 PP-PSIMWRREGGEMITNSFNNT----VPPIVKI--PSQLIGAHEGQQLVLECISEAY 128 (151)
Q Consensus 78 ~~-~~~~W~~~~~~~~~~~~~~~----~~p~~~~--~~~~~~~~~g~~~~l~C~~~g~ 128 (151)
|. +.+.|++ +++.+....... ....+.. ......+...+....+|.+...
T Consensus 142 p~~~~v~W~k-~g~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~ 198 (212)
T 1nfd_E 142 PGSATVTWKA-NGATINDGVKTTKPSKQGQNYMTSSYLSLTADQWKSHNRVSCQVTHE 198 (212)
T ss_dssp SSCCEEEEEE-TTEEECSSCBCCCCBCSSSCEEEEEBCCEEHHHHHTCSCEEEEEECT
T ss_pred CCccEEEEEE-CCeEcCCCeecCCceecCCCceEEEEEEEchhhcCCCCeEEEEEEeC
Confidence 54 7999999 666665321100 0000111 1111123345677889998754
No 192
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.11 E-value=8e-11 Score=78.96 Aligned_cols=81 Identities=20% Similarity=0.457 Sum_probs=53.7
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~~ 79 (151)
|.+++.+|+|.|+|.+.|..+........+.|. ....+|.+...+ ......+|+.+.|.|.+.| .|.
T Consensus 117 I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~----------~~~~~P~v~~~~--~~~~~~~g~~v~l~C~~~g~~p~ 184 (254)
T 2c1o_A 117 ISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELK----------RADAAPTVSIFP--PSSEQLTSGGASVVCFLNNFYPK 184 (254)
T ss_dssp ESSCCGGGCSEEEEEECSSSSCEEBCCEEEEEC----------CCCBCCEEEEEC--CCHHHHHTTEEEEEEEEEEEBSS
T ss_pred ECcCCcccCEEEEEEEEcCcceEecCCEEEEEC----------CCCCCCeeEeec--CChhhccCCcEEEEEEEecccCC
Confidence 578999999999999998865333334455553 112356665533 2223346789999999987 444
Q ss_pred -CeEEEEeCCeeeEec
Q psy16421 80 -PSIMWRREGGEMITN 94 (151)
Q Consensus 80 -~~~~W~~~~~~~~~~ 94 (151)
+.+.|++ +++.+..
T Consensus 185 ~~~v~W~k-~g~~l~~ 199 (254)
T 2c1o_A 185 DINVKWKI-DGSERQN 199 (254)
T ss_dssp CCEEEEEE-SSSEECT
T ss_pred CcEEEEEE-CCCcccC
Confidence 4699999 5666543
No 193
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.11 E-value=3.4e-10 Score=75.10 Aligned_cols=84 Identities=13% Similarity=0.203 Sum_probs=50.7
Q ss_pred CccccccCCeEEEEEEEcCCCCC----CccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPS----VSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~----~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g 76 (151)
|.+++.+|+|.|.|.+.|..+.. ......|.|......... -.....+.+...+ ..+.+.+|+++.|.|.+.+
T Consensus 77 I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p-~~~~~~~~v~~~p--~~~~v~~G~~v~L~C~~~~ 153 (238)
T 2p1y_A 77 LELATPSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGSADDAKK-DAAKKDGQVRQSP--QSLTVWEGETAILNCSYEN 153 (238)
T ss_dssp ESSCCGGGCEEEEEEEEC------CEEECCCEEEEEECCCHHHHH-HHHHHHTCCEEEC--SEEEEETTSCEEEEEECCC
T ss_pred EecCCcccCeeEEEEEEeCCCccccceeCCCeEEEEeccCCCCcC-CcccceeeEEccC--ceEEEeCCCeEEEEEEEec
Confidence 57899999999999999986521 112345555310000000 0000001344434 4577889999999999999
Q ss_pred CCCCeEEEEeC
Q psy16421 77 SPPPSIMWRRE 87 (151)
Q Consensus 77 ~~~~~~~W~~~ 87 (151)
.+.+.+.|++.
T Consensus 154 ~p~~~i~W~k~ 164 (238)
T 2p1y_A 154 SAFDYFPWYQQ 164 (238)
T ss_dssp TTCCEEEEEEE
T ss_pred CCCCcEEEEEE
Confidence 99999999984
No 194
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.11 E-value=3.4e-10 Score=76.14 Aligned_cols=85 Identities=16% Similarity=0.239 Sum_probs=55.0
Q ss_pred CccccccCCeEEEEEEEcCCC---CCCccceEEEEeccccce--eEEeecC-CCCeeEeCCCCCceEeecCCeEEEEeee
Q psy16421 1 MTEVSREHMGAYLCIASNGVP---PSVSKRIMLIVQCQYFSK--LYIYTSS-MPPDILDYPTSSDIMVREGSNVSMRCAA 74 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~---~~~~~~~~l~v~~~~~~~--~~~~~~~-~~p~~~~~~~~~~~~~~~g~~~~l~C~~ 74 (151)
|.+++.+|+|.|.|.+.|..+ ........|.|....... .....+. .++.+...+ ..+.+.+|+++.|.|.+
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~v~~G~~v~L~C~~ 162 (256)
T 3umt_A 85 LRSLTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSP--SSLSASLGERVSITCRA 162 (256)
T ss_dssp ECSCCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEEC--SEEEECTTCCEEEEEEE
T ss_pred ECCCCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCC--CeEEEECCCCEEEEEEE
Confidence 578999999999999998721 123344566664210000 0000001 255665555 56788899999999999
Q ss_pred cCCCCCeEEEEeC
Q psy16421 75 SGSPPPSIMWRRE 87 (151)
Q Consensus 75 ~g~~~~~~~W~~~ 87 (151)
.+.+.+.+.|++.
T Consensus 163 ~~~~~~~v~W~k~ 175 (256)
T 3umt_A 163 SQDIGSNLNWLQQ 175 (256)
T ss_dssp SSCCTTCEEEEEE
T ss_pred ecCCCcEEEEEEE
Confidence 9988889999983
No 195
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.10 E-value=2.6e-10 Score=74.34 Aligned_cols=83 Identities=16% Similarity=0.221 Sum_probs=55.2
Q ss_pred eEeecCCeEEEEeeecCCCCCeEEEEeCCee-----eEecccC----------------------------------CCC
Q psy16421 60 IMVREGSNVSMRCAASGSPPPSIMWRREGGE-----MITNSFN----------------------------------NTV 100 (151)
Q Consensus 60 ~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~-----~~~~~~~----------------------------------~~~ 100 (151)
..+.+|+++.|.|.+.|.|.|.+.|++..+. ....... +..
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~ 90 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYS 90 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSCEEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEEB
T ss_pred EEEcCCCcEEEEEeecCCCCCeEEEECCCCCCccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEEe
Confidence 3445899999999999999999999983221 1111000 112
Q ss_pred CCe-eeeCCceeEeecCCcEEEEeeecccCC---CeeEEEcCCceec
Q psy16421 101 PPI-VKIPSQLIGAHEGQQLVLECISEAYPK---SVNYWTREKGDMI 143 (151)
Q Consensus 101 ~p~-~~~~~~~~~~~~g~~~~l~C~~~g~p~---~~~~W~k~~~~~~ 143 (151)
+|. +.+.+. ..+.+|+.+.|.|.+.|.++ +.|+|+|++..+.
T Consensus 91 ~p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~ 136 (202)
T 1vca_A 91 FPKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMK 136 (202)
T ss_dssp CCSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEE
T ss_pred CCCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECc
Confidence 222 222222 45789999999999998644 3699999987553
No 196
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.10 E-value=4.4e-10 Score=76.06 Aligned_cols=77 Identities=21% Similarity=0.334 Sum_probs=55.2
Q ss_pred CccccccCCeEEEEEEEcCCC----CCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC
Q psy16421 1 MTEVSREHMGAYLCIASNGVP----PSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~----~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g 76 (151)
|.+++++|+|.|+|.+.+... ...+..+.|.|. ....+|.+...+. ..+.+|++++|.|.+.+
T Consensus 66 I~~v~~~DsG~Y~C~a~~~~~~~~~s~~S~~~~L~V~----------~~~~~P~l~~~p~---~~V~~G~~vtL~C~~~~ 132 (257)
T 1b6u_A 66 IGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDIVIT----------GLYEKPSLSAQPG---PTVLAGESVTLSCSSRS 132 (257)
T ss_dssp ECSCCTTTCEEEEEEEECSSCTTSCCCCCCCEEEEEE----------CSSCCCEEECSSC---TTCBTTCEEEEEEECSS
T ss_pred eecCCcccCEEEEEeEeccCCCccccccCCCEEEecc----------cCCCCcceEccCC---CccCCCCEEEEEEeCCC
Confidence 568899999999999986432 234566677764 2234677766552 35789999999999987
Q ss_pred CCCCeEEEEeCCeeeE
Q psy16421 77 SPPPSIMWRREGGEMI 92 (151)
Q Consensus 77 ~~~~~~~W~~~~~~~~ 92 (151)
. .+.+.|+|+ ++.+
T Consensus 133 ~-~~~~~w~k~-g~~~ 146 (257)
T 1b6u_A 133 S-YDMYHLSRE-GEAH 146 (257)
T ss_dssp C-CSEEEEEET-TSSC
T ss_pred C-CcEEEEEEC-Cccc
Confidence 5 478999994 4443
No 197
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.10 E-value=1.9e-10 Score=77.19 Aligned_cols=85 Identities=12% Similarity=0.135 Sum_probs=55.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccc--eeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFS--KLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSP 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~ 78 (151)
|.+++.+|+|.|.|.+.|..+........|.|...... ......+..++.+...+ ....+.+|+++.|.|.+.+.+
T Consensus 84 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p--~~~~v~~G~~v~L~C~~~~~~ 161 (253)
T 3uzq_A 84 LSSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTP--ASLAVSLGQRATISCRASENV 161 (253)
T ss_dssp ECSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEEC--SEEEECTTSCEEEEEEESSCC
T ss_pred eCCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcC--CeEEEeCCCCEEEEEEecCcc
Confidence 57899999999999999966533345566666421000 00000112345555555 567888999999999999987
Q ss_pred CC----eEEEEeC
Q psy16421 79 PP----SIMWRRE 87 (151)
Q Consensus 79 ~~----~~~W~~~ 87 (151)
.+ .+.|++.
T Consensus 162 ~~~~~~~v~W~r~ 174 (253)
T 3uzq_A 162 DRYGNSFMHWYQQ 174 (253)
T ss_dssp EETTEECEEEEEE
T ss_pred ccCCCcEEEEEEE
Confidence 76 8999983
No 198
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.10 E-value=2.7e-10 Score=76.39 Aligned_cols=113 Identities=17% Similarity=0.256 Sum_probs=56.3
Q ss_pred eEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCee-EeCCCCCceE-eecCCeEEEEeeecCCC----CCeEE
Q psy16421 10 GAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDI-LDYPTSSDIM-VREGSNVSMRCAASGSP----PPSIM 83 (151)
Q Consensus 10 G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~-~~~g~~~~l~C~~~g~~----~~~~~ 83 (151)
|.|.|...+..+...- ..+..+|.+ ...+ .... +..|+.+.|.|.+.|.. ...+.
T Consensus 1 ~~~~~~~~~~~~~c~~-----------------~~~~~~P~v~i~~p--s~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~ 61 (240)
T 4acp_A 1 GTKSCDKTHTCPPCPA-----------------PELLGGPSVFLFPP--KPKDTLMISRTPEVTCVVVDVSHEDPEVKFN 61 (240)
T ss_dssp ---------------------------------------CEEEEECC--CHHHHHSSSSCCEEEEEEESCCC--CCCEEE
T ss_pred CceeeeeeecCCCCCc-----------------cccCCCCEEEEECc--ChHHhcccCCCcEEEEEEeccccCCCccEEE
Confidence 7899998886552100 111123443 4443 3333 44699999999998853 34799
Q ss_pred EEeCCeeeEecc---------cC-------------------------------------------CCCCCeeeeCCcee
Q psy16421 84 WRREGGEMITNS---------FN-------------------------------------------NTVPPIVKIPSQLI 111 (151)
Q Consensus 84 W~~~~~~~~~~~---------~~-------------------------------------------~~~~p~~~~~~~~~ 111 (151)
|++ +++.+... .. ...+|.+.+.+...
T Consensus 62 W~k-~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~~~~~~P~V~v~~~~~ 140 (240)
T 4acp_A 62 WYV-DGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAKGQPREPQVYTLPPSR 140 (240)
T ss_dssp EEE-TTEEECCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCCSCCBCCEEEEECCCG
T ss_pred EEE-CCcccCCceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccCCCCCCCEEEEECCCh
Confidence 999 55554211 00 01234443332222
Q ss_pred EeecCCcEEEEeeecc-cCCC-eeEEEcCCcee
Q psy16421 112 GAHEGQQLVLECISEA-YPKS-VNYWTREKGDM 142 (151)
Q Consensus 112 ~~~~g~~~~l~C~~~g-~p~~-~~~W~k~~~~~ 142 (151)
....|+.+.|.|.+.| +|.+ .+.|+|||..+
T Consensus 141 ~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~ 173 (240)
T 4acp_A 141 DELTKNQVSLTCLVKGFYPSDIAVEWESNGQPE 173 (240)
T ss_dssp GGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEC
T ss_pred HHhcCCceEEEEEEeEEeCCCcEEEEEECCEEC
Confidence 2235899999999999 5654 69999998765
No 199
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.10 E-value=1.5e-10 Score=76.29 Aligned_cols=94 Identities=15% Similarity=0.223 Sum_probs=58.0
Q ss_pred CCCeeEeCCCCCceE--eecCCeEEEEeeecCC---C-CCeEEEEeCCeeeEecc---------cC--------------
Q psy16421 47 MPPDILDYPTSSDIM--VREGSNVSMRCAASGS---P-PPSIMWRREGGEMITNS---------FN-------------- 97 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~--~~~g~~~~l~C~~~g~---~-~~~~~W~~~~~~~~~~~---------~~-------------- 97 (151)
.+|.+...+ .... +.+|+++.|.|.+.|. + .+.+.|++++ +.+... ..
T Consensus 8 ~~p~v~~~p--p~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~-~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~ 84 (218)
T 2rgs_A 8 GGPSVFIFP--PNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNN-VEVHTAQTQTHREDYNSTIRVVSTLPIQHQD 84 (218)
T ss_dssp -CCEEEEEC--CCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETT-EEECCCEEEEEEETTTTEEEEEEEEECCHHH
T ss_pred CCCEEEEEC--cCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECC-ccccCcccccccccCCCeEEEEEEEEEcHHH
Confidence 345554433 2233 6789999999999876 3 3789999954 433210 00
Q ss_pred -----------------------------CCCCCeeeeCCceeEeecCCcEEEEeeecc-cCCC-eeEEEcCCceec
Q psy16421 98 -----------------------------NTVPPIVKIPSQLIGAHEGQQLVLECISEA-YPKS-VNYWTREKGDMI 143 (151)
Q Consensus 98 -----------------------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~-~~~W~k~~~~~~ 143 (151)
+..+|.+.+.+......+|+.+.|.|.+.| +|.+ .++|+|||..+.
T Consensus 85 ~~D~g~Y~C~~~~~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~ 161 (218)
T 2rgs_A 85 WMSGKEFKCKVNNKDLPSPIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEE 161 (218)
T ss_dssp HHTTCCEEEEEEETTCSSCEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred cCCCCeEEEEEECCcCCCcceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEecc
Confidence 012333332221111235899999999999 6766 799999987653
No 200
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.10 E-value=1.1e-10 Score=78.35 Aligned_cols=80 Identities=19% Similarity=0.404 Sum_probs=53.5
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~~ 79 (151)
|.+++.+|+|.|.|.+.|..+........|.|.. ...+|.+...+ ....+.+|+.+.|.|.+.| .|.
T Consensus 113 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~----------~~~~P~v~~~~--~~~~~~~g~~v~L~C~~~g~~p~ 180 (252)
T 3bkj_L 113 ISRVEAEDLGVYYCFQASLVPLTFGAGTKLELKR----------ADAAPTVSIFP--PSSEQLTSGGASVVCFLNNFYPK 180 (252)
T ss_dssp ESSCCGGGCEEEEEEECSBSSCEECCCEEEEECC----------CCBCCEEEEEC--CCHHHHHHTEEEEEEEEEEEBSS
T ss_pred ECCCCcccCEEEEEEEEcCCccEECCCEEEEEeC----------CCcCcEEEEeC--CChhhcCCCcEEEEEEEeeEeCC
Confidence 5789999999999999987653233344565531 12356665433 2223447899999999987 444
Q ss_pred C-eEEEEeCCeeeEe
Q psy16421 80 P-SIMWRREGGEMIT 93 (151)
Q Consensus 80 ~-~~~W~~~~~~~~~ 93 (151)
+ .+.|++ +++.+.
T Consensus 181 ~~~v~W~k-~g~~~~ 194 (252)
T 3bkj_L 181 DINVKWKI-DGSERQ 194 (252)
T ss_dssp CCEEEEEE-TTEEEC
T ss_pred CcEEEEEE-CCeecC
Confidence 3 799999 566654
No 201
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.10 E-value=1.2e-10 Score=80.87 Aligned_cols=76 Identities=24% Similarity=0.384 Sum_probs=56.1
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..| .....+.|.|... ...+|.+.... +....+.+|+.+.|.|.+.|.|.+
T Consensus 184 i~~v~~~d~G~Y~C~a~n~~g-~~~~~~~l~V~~~---------~~~~p~~~~~~-~~~~~~~~G~~v~l~C~~~g~p~p 252 (334)
T 1ry7_B 184 MESVVPSDRGNYTCVVENKFG-SIRQTYTLDVLER---------SPHRPILQAGL-PANQTAVLGSDVEFHCKVYSDAQP 252 (334)
T ss_dssp ECSCCGGGCCCEEEEEEETTE-EEEEEEEEEEECC---------CCSSCBCCTTC-SCCEEEESSCCEEECCCCBCSSCE
T ss_pred ECCCCcccCEEEEEEEEeCCC-CEEEEEEEEEecC---------CCCCCceEecC-CCceEEeCCCCEEEEEEEecCCCC
Confidence 467899999999999999987 4556666666411 11233333221 145778899999999999999999
Q ss_pred eEEEEeC
Q psy16421 81 SIMWRRE 87 (151)
Q Consensus 81 ~~~W~~~ 87 (151)
.+.|++.
T Consensus 253 ~v~W~~~ 259 (334)
T 1ry7_B 253 HIQWLKH 259 (334)
T ss_dssp EEEEEEC
T ss_pred eEEEEEC
Confidence 9999993
No 202
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.09 E-value=1e-09 Score=71.55 Aligned_cols=87 Identities=21% Similarity=0.304 Sum_probs=57.8
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEeCCe-eeE-----------------------------ecccC----------
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRREGG-EMI-----------------------------TNSFN---------- 97 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~-~~~-----------------------------~~~~~---------- 97 (151)
..+.+.+|+++.|.|.+.+.+.+.+.|++.+. ... ....-
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 88 (213)
T 3d9a_L 9 ATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFC 88 (213)
T ss_dssp SEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred ccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEEE
Confidence 45778899999999999998888999997321 110 00000
Q ss_pred -----------------C---CCCCeeeeCCceeEeecCCcEEEEeeecc-cCCC-eeEEEcCCceecc
Q psy16421 98 -----------------N---TVPPIVKIPSQLIGAHEGQQLVLECISEA-YPKS-VNYWTREKGDMIA 144 (151)
Q Consensus 98 -----------------~---~~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~-~~~W~k~~~~~~~ 144 (151)
+ ..+|.+...........|+.+.|.|.+.| .|.+ .++|+|+|..+..
T Consensus 89 ~~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~ 157 (213)
T 3d9a_L 89 QQSNSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQN 157 (213)
T ss_dssp EECSSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred eeecCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcc
Confidence 0 11344443322222346899999999988 6665 7999999876654
No 203
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.09 E-value=7.8e-10 Score=71.53 Aligned_cols=90 Identities=17% Similarity=0.217 Sum_probs=59.7
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecc---------cC--------------------
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNS---------FN-------------------- 97 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~---------~~-------------------- 97 (151)
.+|.+...+ . ..+.+|+++.|.|.+.+.+. .+.|++ ++..+... ..
T Consensus 4 ~~P~i~~~p--~-~~v~~G~~v~L~C~~~~~~~-~~~W~k-~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 78 (198)
T 1ugn_A 4 PKPTLWAEP--G-SVITQGSPVTLRCQGGQETQ-EYRLYR-EKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYG 78 (198)
T ss_dssp CCCEEEEES--C-SEEETTCCEEEEEECCTTCC-CEEEEE-SSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEeccC--C-CcccCCCcEEEEEEecCCCc-EEEEEE-CCccccccccccccCCcccEEEECCCCHHHCeEEEEEEE
Confidence 567777666 3 47889999999999998765 699999 45444210 00
Q ss_pred --C-C----------------CCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceec
Q psy16421 98 --N-T----------------VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMI 143 (151)
Q Consensus 98 --~-~----------------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~ 143 (151)
. . .+|.+...+ ...+.+|+++.|.|.+.+. .+.+.|+|+|..+.
T Consensus 79 n~~~g~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~ 141 (198)
T 1ugn_A 79 SDTAGRSESSDPLELVVTGAYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEH 141 (198)
T ss_dssp ETTTEECCCCCCEEEEEECSSCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC-----
T ss_pred CCCCCcccCCccEEEEEcccccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccC
Confidence 1 0 022332222 2467899999999999998 78999999987653
No 204
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.09 E-value=2.3e-10 Score=79.31 Aligned_cols=106 Identities=13% Similarity=0.215 Sum_probs=68.5
Q ss_pred ccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCe
Q psy16421 2 TEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPS 81 (151)
Q Consensus 2 ~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~ 81 (151)
.++..+|+|.|+|.|.|..+ ..+..+.|.|. .+|.+...+. ....+.+|+++.|.|.+.+.|.|.
T Consensus 199 ~~~~~~d~G~Y~C~a~n~~~-~~~~~~~l~V~-------------~~P~~~~~~~-~~~~~~~g~~~~l~C~~~g~p~p~ 263 (331)
T 3u83_A 199 VPSREAHQQSLACIVNYHMD-RFKESLTLNVQ-------------YEPEVTIEGF-DGNWYLQRMDVKLTCKADANPPAT 263 (331)
T ss_dssp CCCGGGTTCEEEEEEEETTE-EEEEEEECCEE-------------EEEEEEEECC-CSCCBTTCCCEEEEEEEEEESCCC
T ss_pred EeccccCCCEEEEEEecCCC-cceeeEEEEEe-------------cCCeEEEecC-CCceEeCCCeEEEEEeCcCCCCCC
Confidence 45688999999999999877 44455555543 4555543332 345577899999999999999998
Q ss_pred -EEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 82 -IMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 82 -~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
+.|+++ +..+.... ......+.+.. .+...+.....|.+..
T Consensus 264 ~i~W~~~-~~~~~~~~-~~~~~~L~i~~---~v~~~d~G~Y~C~a~N 305 (331)
T 3u83_A 264 EYHWTTL-NGSLPKGV-EAQNRTLFFKG---PINYSLAGTYICEATN 305 (331)
T ss_dssp EEEEEET-TBSCCTTE-EEETTEEEECS---CCCGGGCEEEEEEEEE
T ss_pred EEEEEEC-CCcccccc-eecCcEEEEeC---CCccccCeEEEEEEEe
Confidence 999994 44432211 00111222220 1345677889999864
No 205
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.09 E-value=4e-10 Score=72.45 Aligned_cols=116 Identities=12% Similarity=0.103 Sum_probs=63.6
Q ss_pred Ccc-ccccCCeEEEEEEEcCCCCCCccceEEEEecccccee-----EEeecCCCCeeEeCCC--CCc---eEeecCCeEE
Q psy16421 1 MTE-VSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKL-----YIYTSSMPPDILDYPT--SSD---IMVREGSNVS 69 (151)
Q Consensus 1 i~~-v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~-----~~~~~~~~p~~~~~~~--~~~---~~~~~g~~~~ 69 (151)
|.+ ++.+|+|.|+|.|.|..|. .+..+.+.|.....+.. ....+..+|.+..... ... ..+.+|+++.
T Consensus 48 I~~~~~~~D~G~Y~C~a~n~~g~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~ 126 (186)
T 1jbj_A 48 LQDFSEVEDSGYYVCYTPASNKN-TYLYLKARVGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVL 126 (186)
T ss_dssp EESCCTTTSCEEEEEECSSCCCC-CCEEECCCCCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEE
T ss_pred ECCCCccccCEEEEEEEEeCCCc-EEEEEEEEEecccccccccccccccccCCccccccccccccccccceecCCCCeEE
Confidence 467 8999999999999999884 33333333321100000 0000001111110000 001 1234899999
Q ss_pred EEeeecCCCCCeEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 70 MRCAASGSPPPSIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 70 l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
|.|.+ |.|.+.|++ +++.+..... ....+.+ ..+...+....+|.+..
T Consensus 127 l~C~~---p~p~i~W~k-~g~~i~~~~~--~~~~L~i----~~v~~~D~G~Y~C~a~N 174 (186)
T 1jbj_A 127 LTCGL---TDKTIKWLK-DGSIISPLNA--TKNTWNL----GNNAKDPRGTYQCQGAK 174 (186)
T ss_dssp EECSS---SCSCEEEEE-TTEECCCSSC--CSSCCEE----EETTSCCEEEEEEEESS
T ss_pred EEeeC---CCCeEEEEE-CCEECcccCC--CcceEEE----CCCCcCcCEEEEEEEEc
Confidence 99999 789999999 6666543221 1111222 23566788899999864
No 206
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.09 E-value=4.8e-10 Score=73.94 Aligned_cols=37 Identities=27% Similarity=0.519 Sum_probs=29.9
Q ss_pred ceeEeecCCcEEEEeeecc-cCCCeeEEEcCCceeccC
Q psy16421 109 QLIGAHEGQQLVLECISEA-YPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 109 ~~~~~~~g~~~~l~C~~~g-~p~~~~~W~k~~~~~~~~ 145 (151)
....+.+|+.+.|.|.+.| .|.|.++|+|+++.++..
T Consensus 126 ~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~ 163 (226)
T 4f80_A 126 VDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPT 163 (226)
T ss_dssp EEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCC
T ss_pred ceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCC
Confidence 4456788999999999988 599999999976655543
No 207
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.09 E-value=1.5e-10 Score=76.00 Aligned_cols=74 Identities=22% Similarity=0.345 Sum_probs=52.9
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC-CC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS-PP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-~~ 79 (151)
|.+|+.+|+|.|.|.+.|..+ .....+.|+|. .+|...... ...+..|+.. |.|.+.+. |.
T Consensus 63 I~~v~~~d~G~Y~C~a~n~~~-~~~~~~~ltV~-------------~~P~~~~i~---~~~~~~g~~~-l~C~a~g~~P~ 124 (210)
T 1gsm_A 63 VRNASLSAAGTRVCVGSCGGR-TFQHTVQLLVY-------------AFPNQLTVS---PAALVPGDPE-VACTAHKVTPV 124 (210)
T ss_dssp ECSCCGGGCEEEEEEEEETTE-EEEEEEEEEEE-------------BCCSEEEEE---SSSBCTTCCE-EEEEEEEEBCC
T ss_pred ECccCcccCceEEEEEEeCCC-ceEEEEEEEEE-------------ecCCCcEEc---cceEEeCCce-EEEEeCCCCCC
Confidence 578999999999999999876 45566676664 455443311 1145567878 99998874 63
Q ss_pred ----CeEEEEeCCeeeEe
Q psy16421 80 ----PSIMWRREGGEMIT 93 (151)
Q Consensus 80 ----~~~~W~~~~~~~~~ 93 (151)
+++.|++ |++.+.
T Consensus 125 ~~~~lti~Wlk-~~~~L~ 141 (210)
T 1gsm_A 125 DPNALSFSLLV-GGQELE 141 (210)
T ss_dssp CTTTEEEEEEE-TTEECT
T ss_pred CCCCcEEEEEE-CCEEcc
Confidence 4899999 677764
No 208
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.09 E-value=1.4e-10 Score=78.33 Aligned_cols=100 Identities=15% Similarity=0.210 Sum_probs=65.9
Q ss_pred ccccccCCeEEEEEEEcCC-CCCC--ccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCC
Q psy16421 2 TEVSREHMGAYLCIASNGV-PPSV--SKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSP 78 (151)
Q Consensus 2 ~~v~~~d~G~Y~C~~~~~~-~~~~--~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~ 78 (151)
..+..+|.|.|+|.|.|.. |... +..+.|.|. .+|.+.....+....+.+|+.+.|.|.+.|.|
T Consensus 147 ~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~-------------~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P 213 (265)
T 2oz4_A 147 KATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVL-------------YGPRLDERDCPGNWTWPENSQQTPMCQAWGNP 213 (265)
T ss_dssp ECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEE-------------EEEECCGGGSCSEEEEETTCEECCCCCCEEES
T ss_pred ccccccCCceEEEEEEcCCCCCcccccccEEEEEE-------------eCCccccccCCCccEEcCCCeEEEEeECccCC
Confidence 4567888999999998654 5322 144555553 34444332212456788999999999999999
Q ss_pred CCeEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 79 PPSIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 79 ~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
.|.+.|+++ +..+.. .. ....+...+.....|.+..
T Consensus 214 ~p~i~W~~~-~~~~~~---~g---------~~~~v~~~d~G~Y~C~a~N 249 (265)
T 2oz4_A 214 LPELKCLKD-GTFPLP---IG---------ESVTVTRDLEGTYLCRARS 249 (265)
T ss_dssp CCEEEEEET-TTEECC---TT---------SCEECCGGGCEEEEEEEEE
T ss_pred CCeEEEEEC-CcccCC---CC---------cEEEeehhhCeEEEEEEEC
Confidence 999999995 432111 00 1122556778899999864
No 209
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.08 E-value=1.5e-10 Score=76.06 Aligned_cols=78 Identities=21% Similarity=0.436 Sum_probs=52.5
Q ss_pred CccccccCCeEEEEEEEcCCCCC--CccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC-
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPS--VSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS- 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~--~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~- 77 (151)
|.+++.+|+|.|.|.+.+..+.. ......|.|.. ....+|.+...+ ....+.+|+.+.|.|.+.|.
T Consensus 85 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~---------~~~~~P~i~~~~--~~~~~~~g~~v~L~C~~~g~~ 153 (220)
T 1pz5_B 85 MNNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSS---------ATTTAPSVYPLV--PGCSDTSGSSVTLGCLVKGYF 153 (220)
T ss_dssp ECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECS---------SCCBCCEEEEEC--CCSCCSCSSSEEEEEEEEEEB
T ss_pred EccCCHHHCEEEEEEEecCCcccceECCCEEEEEcc---------CCCCCCeEEEcc--cccccCCCCcEEEEEEEEEEe
Confidence 57899999999999999975421 11345666541 112345554332 12235679999999999886
Q ss_pred CCC-eEEEEeCCe
Q psy16421 78 PPP-SIMWRREGG 89 (151)
Q Consensus 78 ~~~-~~~W~~~~~ 89 (151)
|.| .+.|++++.
T Consensus 154 P~p~~v~W~~~~~ 166 (220)
T 1pz5_B 154 PEPVTVKWNYGAL 166 (220)
T ss_dssp SSCCEEEEGGGTC
T ss_pred CCCeEEEEecCCc
Confidence 888 999999543
No 210
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.08 E-value=2.6e-09 Score=68.60 Aligned_cols=89 Identities=16% Similarity=0.186 Sum_probs=60.6
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecc-------cC----------------------
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNS-------FN---------------------- 97 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~-------~~---------------------- 97 (151)
.+|.+...+ .. .+.+|++++|.|.+.+ +.+.+.|+| +++.+... ..
T Consensus 3 ~~P~i~~~p--~~-~v~~G~~v~L~C~~~~-~~~~~~w~k-~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 77 (188)
T 1oll_A 3 PKPFIWAEP--HF-MVPKEKQVTICCQGNY-GAVEYQLHF-EGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYR 77 (188)
T ss_dssp CCCEEEEES--CS-EEETTCCEEEEEECCT-TCCEEEEEE-TTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEeec--CC-cCCCCCCEEEEEecCC-CCCEEEEEE-CCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEec
Confidence 467776666 33 7889999999999876 457899999 45443210 00
Q ss_pred ---------------C---CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCcee
Q psy16421 98 ---------------N---TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDM 142 (151)
Q Consensus 98 ---------------~---~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~ 142 (151)
+ ..+|.+...+ ...+.+|+++.|.|.+.+ +.+.+.|+|+|..+
T Consensus 78 ~~~~~~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~ 138 (188)
T 1oll_A 78 VGELWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSS 138 (188)
T ss_dssp ETTEECCCCCCEEEEEESCSCCCEEEEES-CSEEETTCEEEEEEECSS-SCSEEEEEEESSSC
T ss_pred CCCCCCCCCCceEEEecccCCCCeEEECC-CCccccCCEEEEEEEcCC-CCCEEEEEECCccc
Confidence 0 0134444333 345789999999999876 45689999997644
No 211
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.08 E-value=1.5e-10 Score=75.62 Aligned_cols=75 Identities=20% Similarity=0.498 Sum_probs=51.1
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC-CC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS-PP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-~~ 79 (151)
|.+++.+|+|.|.|.+.|.. .......|.|.. ....+|.+...+ ....+.+|+.+.|.|.+.|. |.
T Consensus 82 I~~v~~~D~G~Y~C~~~~~~--~~~~~~~l~V~~---------~~~~~P~v~~~~--~~~~~~~g~~v~L~C~~~g~~P~ 148 (210)
T 3d9a_H 82 LNSVTTEDTATYYCANWDGD--YWGQGTLVTVSA---------AKTTPPSVYPLA--PGSAAQTNSMVTLGCLVKGYFPE 148 (210)
T ss_dssp ECSCCGGGCEEEEEEETTSS--CBCCCEEEEECC---------CCCBCCEEEEEC--CTTSCCCSSEEEEEEEEEEEBSS
T ss_pred ECCCCcccCEEEEEEEecCc--ccccceEEEecc---------CCCCCCEEEEec--CCcccccCCcEEEEEEEeeEecC
Confidence 57899999999999998863 222335566531 112345554332 12345679999999999886 77
Q ss_pred C-eEEEEeCC
Q psy16421 80 P-SIMWRREG 88 (151)
Q Consensus 80 ~-~~~W~~~~ 88 (151)
| .+.|++++
T Consensus 149 p~~v~W~~~~ 158 (210)
T 3d9a_H 149 PVTVTWNSGS 158 (210)
T ss_dssp CCEEEEGGGT
T ss_pred CcEEEEeeCC
Confidence 7 99999943
No 212
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.07 E-value=6.4e-10 Score=77.39 Aligned_cols=74 Identities=19% Similarity=0.284 Sum_probs=52.1
Q ss_pred CccccccCCeEEEEEEEcC--CCCCC---ccceEEEEeccccceeEEeecCCCC----eeEeCCCCCceEeecCCeEEEE
Q psy16421 1 MTEVSREHMGAYLCIASNG--VPPSV---SKRIMLIVQCQYFSKLYIYTSSMPP----DILDYPTSSDIMVREGSNVSMR 71 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~--~~~~~---~~~~~l~v~~~~~~~~~~~~~~~~p----~~~~~~~~~~~~~~~g~~~~l~ 71 (151)
|.+++.+|+|.|+|.|.|. .|... +..+.|.|. .+| .+. .+ ....+.+|+.+.|.
T Consensus 186 I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~-------------~~~~~~~~~~-~~--~~~~v~~G~~~~l~ 249 (329)
T 3oq3_B 186 IHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVI-------------PSQDHRFKLI-LD--PKINVTIGEPANIT 249 (329)
T ss_dssp ECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEE-------------CCCCCCEEEE-CC--SEEEECTTSCEEEE
T ss_pred EeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEE-------------CCCCCCCcee-cC--CeeEEecCCCEEEE
Confidence 5689999999999999987 55221 112445443 222 222 33 45788899999999
Q ss_pred eeecCCC---CC-eEEEEeCCeee
Q psy16421 72 CAASGSP---PP-SIMWRREGGEM 91 (151)
Q Consensus 72 C~~~g~~---~~-~~~W~~~~~~~ 91 (151)
|.+.+.| .+ .+.|++ +++.
T Consensus 250 C~~~g~p~~~~~i~v~W~~-~g~~ 272 (329)
T 3oq3_B 250 CTAVSTSLLVDDVLIDWEN-PSGW 272 (329)
T ss_dssp EEEEETTCCTTCCEEEEEC-TTSC
T ss_pred EEEEECCCCCCCcEEEEEE-CCee
Confidence 9999987 67 889999 4544
No 213
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.07 E-value=7.4e-10 Score=74.26 Aligned_cols=107 Identities=16% Similarity=0.210 Sum_probs=66.7
Q ss_pred CccccccCCeEEEEEEEcCCCC-CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP-SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~-~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++++|+|.|+|.+.|..+. ..+..+.|.|.. ...+|.+...+ ...+.+|+++.|.|.+.+. .
T Consensus 64 I~~v~~~DsG~Y~C~~~~~~~~s~~S~~~~L~V~~----------~~~~P~i~~~p---~~~v~~G~~vtL~C~~~~~-~ 129 (242)
T 1p6f_A 64 IPDMNSRMAGQYSCIYRVGELWSEPSNLLDLVVTE----------MYDTPTLSVHP---GPEVISGEKVTFYCRLDTA-T 129 (242)
T ss_dssp ECSCCGGGCEEEEEEEEETTEECCCCCCEEEEEEC----------CSCCCEEEEES---CSEEETTCEEEEEEECTTS-C
T ss_pred ecCCCcccCeEEEEEEecCCccccCCcceEEEeec----------ccCCCceEccC---CCccCCCCcEEEEEecCCC-C
Confidence 5689999999999999886432 345666776641 12356666544 3467899999999998764 5
Q ss_pred CeEEEEeCCeeeEecccC-CCCCCeeeeCCceeEeecCCcEEEEeeec
Q psy16421 80 PSIMWRREGGEMITNSFN-NTVPPIVKIPSQLIGAHEGQQLVLECISE 126 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 126 (151)
+.+.|+| +++.+..... ......|.+ ..+...+.....|.+.
T Consensus 130 ~~~~w~k-~g~~~~~~~~~~~~~~~l~I----~~v~~~d~G~Y~C~a~ 172 (242)
T 1p6f_A 130 SMFLLLK-EGRSSHVQRGYGKVQAEFPL----GPVTTAHRGTYRCFGS 172 (242)
T ss_dssp SEEEEEE-CSSSCEEEEEECSSEEEEEE----EECCGGGCEEEEEEEE
T ss_pred CEEEEEE-CCCccCccccCCCceEEEEe----CCCccccCEEEEEEEE
Confidence 6899999 4543321000 001111221 1244566677788764
No 214
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.07 E-value=1.2e-09 Score=70.69 Aligned_cols=85 Identities=16% Similarity=0.189 Sum_probs=54.5
Q ss_pred CceEeecCCeEEEEeeecCCCC-----CeEEEEeCCeeeEecccC---------------------------------CC
Q psy16421 58 SDIMVREGSNVSMRCAASGSPP-----PSIMWRREGGEMITNSFN---------------------------------NT 99 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~-----~~~~W~~~~~~~~~~~~~---------------------------------~~ 99 (151)
..+.+.+|+.+.|.|.+.+.+. +.+.|++.+++......+ ..
T Consensus 10 ~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 89 (202)
T 3bp6_B 10 EVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICG 89 (202)
T ss_dssp SEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred cCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeC
Confidence 4567889999999999998876 889999933322111100 00
Q ss_pred ---C--CCeeee--C---C--ceeEeecCCcEEEEeeecccCCCeeEEEcCCcee
Q psy16421 100 ---V--PPIVKI--P---S--QLIGAHEGQQLVLECISEAYPKSVNYWTREKGDM 142 (151)
Q Consensus 100 ---~--~p~~~~--~---~--~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~ 142 (151)
. ...+.+ . + ....+.+|+.+.|.|.+.|.|.|.+.|++++..+
T Consensus 90 ~~~~~~~~~l~V~~~~~~p~~~~~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~ 144 (202)
T 3bp6_B 90 AAWDYKYLTVKVKASYMRIDTRILEVPGTGEVQLTCQARGYPLAEVSWQNVSVPA 144 (202)
T ss_dssp TEEEEEEEEEEEEBCCCCEEEEEEECTTTCCEEEEEEEEEBSCCEEEETTCCSCC
T ss_pred CCcceEEEEEEecCCCCcccEEEEecCCCCeEEEEEEccccCCceEEEEeCCCCc
Confidence 0 000100 0 0 1113468999999999999999999999987643
No 215
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.07 E-value=1.4e-10 Score=76.35 Aligned_cols=79 Identities=19% Similarity=0.428 Sum_probs=52.4
Q ss_pred CccccccCCeEEEEEEEcCCCC----CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP----SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~----~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g 76 (151)
|.+++.+|+|.|.|.+.+..+. .......|.|.. ....+|.+...+ ....+.+|+.+.|.|.+.|
T Consensus 85 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~---------~~~~~P~i~~~~--~~~~~~~g~~v~L~C~~~g 153 (222)
T 1q9r_B 85 MNTLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSA---------AKTTPPSVYPLA--PGSAAQTNSMVTLGCLVKG 153 (222)
T ss_dssp ECSCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECS---------SCCBCCEEEEEC--CCSCCCCSSEEEEEEEEEE
T ss_pred ECcCCcccCeEEEEEEeccCCcccceEeCCceEEEecc---------CCCCCCeEEEcc--ccccccCCCcEEEEEEEcc
Confidence 5789999999999999987541 122345666541 111345554332 1123557999999999988
Q ss_pred C-CCC-eEEEEeCCeee
Q psy16421 77 S-PPP-SIMWRREGGEM 91 (151)
Q Consensus 77 ~-~~~-~~~W~~~~~~~ 91 (151)
. |.| .+.|++ +++.
T Consensus 154 ~~P~p~~v~W~~-~g~~ 169 (222)
T 1q9r_B 154 YFPEPVTVTWNS-GSLS 169 (222)
T ss_dssp EBSSCCEEEEGG-GTBC
T ss_pred EECCCCEEEEec-CCeE
Confidence 4 877 999999 4543
No 216
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.07 E-value=3.8e-11 Score=79.48 Aligned_cols=81 Identities=15% Similarity=0.316 Sum_probs=51.0
Q ss_pred CccccccCCeEEEEEEEcCCCC--CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP--SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSP 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~ 78 (151)
|.+++.+|+|.|.|.+.|..+. .....+.|.|.. ....+|.+...+ ......+|+.+.|.|.+.|.+
T Consensus 95 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~---------~~~~~p~v~~~~--~~~~~~~g~~v~L~C~~~g~~ 163 (234)
T 2j6e_L 95 ISGLRSEDEADYYCATWDDSLSAVIFGGGTKLTVLG---------QPKAAPSVTLFP--PSSEELQANKATLVCLISDFF 163 (234)
T ss_dssp EESCCSTTCSEEEEEEEETTTTEEEECCCBCCCBCC---------CCCCCCCCCEEC--CCHHHHTTSCCCEEECCCBCS
T ss_pred ECCCCHHHCEEEEEEEEcCCcceeEecCCEEEEEec---------CCCCCCcccccC--CChhHhcCCceEEEEEEEEEc
Confidence 5689999999999999998761 112223333320 011345554322 122334688999999998854
Q ss_pred C--CeEEEEeCCeeeEe
Q psy16421 79 P--PSIMWRREGGEMIT 93 (151)
Q Consensus 79 ~--~~~~W~~~~~~~~~ 93 (151)
+ +.+.|++ +++.+.
T Consensus 164 p~~~~v~W~k-~g~~l~ 179 (234)
T 2j6e_L 164 PGAVTVAWKA-DGAPVK 179 (234)
T ss_dssp SCCCEEEEEE-TTEECC
T ss_pred CCceEEEEEE-CCEECC
Confidence 3 4899999 666654
No 217
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.07 E-value=1.2e-09 Score=70.85 Aligned_cols=90 Identities=18% Similarity=0.243 Sum_probs=60.8
Q ss_pred CCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEec--------cc---C-----------------
Q psy16421 46 SMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITN--------SF---N----------------- 97 (151)
Q Consensus 46 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~--------~~---~----------------- 97 (151)
..+|.+...+ . ..+.+|+++.|.|.+.+ +.+.+.|+|+ ++.+.. .. .
T Consensus 6 ~~~P~i~~~p--~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~-g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C 80 (201)
T 1nkr_A 6 HRKPSLLAHP--G-PLVKSEETVILQCWSDV-MFEHFLLHRE-GMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRC 80 (201)
T ss_dssp -CCCEEEEES--C-SEEETTCCEEEEEEESS-CCSEEEEEEE-SSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEE
T ss_pred CCCCeEEEEc--C-CccCCCCcEEEEEeccC-CCCEEEEEEC-CCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEE
Confidence 3567777665 3 57889999999999975 7789999994 432210 00 0
Q ss_pred ---C---------------------CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCcee
Q psy16421 98 ---N---------------------TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDM 142 (151)
Q Consensus 98 ---~---------------------~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~ 142 (151)
. ..+|.+...+. ..+.+|+++.|.|.+.+ +.+.+.|+|+|..+
T Consensus 81 ~a~~~~~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~ 147 (201)
T 1nkr_A 81 YGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAH 147 (201)
T ss_dssp EEEBTTBTTCCCCCCCCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSS
T ss_pred eEecCCCCccccCCCCCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCccc
Confidence 0 01233333332 35789999999999987 56789999997654
No 218
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.06 E-value=7.5e-10 Score=74.43 Aligned_cols=84 Identities=13% Similarity=0.161 Sum_probs=53.6
Q ss_pred CccccccCCeEEEEEEEcC-----------CCCCCccceEEEEecccccee--EEeecCCCCeeEeCCCCCceEeecCCe
Q psy16421 1 MTEVSREHMGAYLCIASNG-----------VPPSVSKRIMLIVQCQYFSKL--YIYTSSMPPDILDYPTSSDIMVREGSN 67 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~-----------~~~~~~~~~~l~v~~~~~~~~--~~~~~~~~p~~~~~~~~~~~~~~~g~~ 67 (151)
|.+++.+|+|.|.|.+.|. ..........|.|........ ..-....++.+...+ ..+.+.+|++
T Consensus 89 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~G~~ 166 (256)
T 3juy_B 89 LRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAP--GTLSLSPGER 166 (256)
T ss_dssp ECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEEC--SEEEECTTSC
T ss_pred ECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecC--CeEEEeCCCC
Confidence 5789999999999999986 111233445566642100000 000000134455544 5678889999
Q ss_pred EEEEeeecCCCC-CeEEEEe
Q psy16421 68 VSMRCAASGSPP-PSIMWRR 86 (151)
Q Consensus 68 ~~l~C~~~g~~~-~~~~W~~ 86 (151)
+.|.|.+.+.+. +.+.|++
T Consensus 167 v~L~C~~~~~~~~~~v~W~k 186 (256)
T 3juy_B 167 ATFSCRSSHSIRSRRVAWYQ 186 (256)
T ss_dssp EEEEEEESSCCTTCCEEEEE
T ss_pred EEEEEEECCCcCCeeEEEEE
Confidence 999999988775 8999998
No 219
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.05 E-value=7.2e-10 Score=70.46 Aligned_cols=93 Identities=13% Similarity=0.120 Sum_probs=61.1
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|.|.+.|..+ ...+.|.|.. ....|.+.... ....|.|.+.+.|.|
T Consensus 64 I~~v~~~DsG~Y~C~~~n~~~---~~~~~L~V~~----------~~~~p~i~~~~----------~~~~L~C~~~~~p~p 120 (171)
T 1ccz_A 64 IYNLTSSDEDEYEMESPNITD---TMKFFLYVLE----------MVSKPMIYWEC----------SNATLTCEVLEGTDV 120 (171)
T ss_dssp ECSCCGGGCEEEEEECTTCCS---CEEEEEEEEC----------CCCCCEEEEET----------TTTEEEEECSSCSSC
T ss_pred ECCCChhhCceEEEEEeCCCC---cEEEEEEEEC----------cCCCCEEEEec----------CCcEEEEEeCCCCCc
Confidence 578999999999999988766 4556666641 11234443322 113799999998999
Q ss_pred eEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 81 SIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
.+.|++ +++.+.... ...+. ....++....+|.+..
T Consensus 121 ~i~W~~-~~~~l~~~~----~~~l~------~~~~~~~g~Y~C~a~N 156 (171)
T 1ccz_A 121 ELKLYQ-GKEHLRSLR----QKTMS------YQWTNLRAPFKCKAVN 156 (171)
T ss_dssp EEEEEE-TTEEEEEES----SSEEE------EECSCCSSCEEEEEEE
T ss_pred EEEEEE-CCEECcCCc----ceEEE------EeccCCCceEEEEEEc
Confidence 999999 666665321 11121 1235777789999864
No 220
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.05 E-value=7e-10 Score=76.66 Aligned_cols=76 Identities=21% Similarity=0.335 Sum_probs=55.7
Q ss_pred CccccccCCeEEEEEEEcCCCCC----CccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPS----VSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~----~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g 76 (151)
|.+++.+|+|.|+|.|.|..+.. .+..+.|.|. ....+|.+...+. ..+.+|+++.|.|.+..
T Consensus 178 i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~----------~~~~~p~i~~~~~---~~v~~G~~v~L~C~~~~ 244 (316)
T 3vh8_G 178 IGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVT----------GPYEKPSLSAQPG---PKVQAGESVTLSCSSRS 244 (316)
T ss_dssp ECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEE----------CSSCCCEEEEESC---SCCCTTSCCEEEEEESS
T ss_pred ECCCChhhCceEEEEEecCCCCccccCCCCCEEEEec----------CCCCCCeEEeCCC---CeecCCCcEEEEEECCC
Confidence 56789999999999999987731 2455666663 1235666666542 35678999999999974
Q ss_pred CCCCeEEEEeCCeee
Q psy16421 77 SPPPSIMWRREGGEM 91 (151)
Q Consensus 77 ~~~~~~~W~~~~~~~ 91 (151)
+.+.+.|+++ +..
T Consensus 245 -~~~~~~W~k~-g~~ 257 (316)
T 3vh8_G 245 -SYDMYHLSRE-GGA 257 (316)
T ss_dssp -CCSEEEEEET-TSS
T ss_pred -CCcEEEEEEC-CCc
Confidence 7889999994 443
No 221
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.05 E-value=1.6e-10 Score=75.55 Aligned_cols=80 Identities=13% Similarity=0.246 Sum_probs=51.6
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~~ 79 (151)
|.+++.+|+|.|+|.|.|..+. ......+.+. ..+..+|.+...+. .....+|+.+.|.|.+.| .|.
T Consensus 72 I~~~~~~D~G~Y~C~a~~~~~~-~~~~~~v~~~---------~~~~~~P~v~~~~~--~~~~~~g~~~~L~C~~~g~~P~ 139 (207)
T 2vol_A 72 IMHQDWLNGKEFKCRVNSAAFP-APIEKTISKT---------KGRPKAPQVYTLPP--PKEQMAKDKVSLTCMITDFFPE 139 (207)
T ss_dssp CCHHHHHTTCCEEEEEECTTCS-SCEEEEECCC---------CCCCBCCEEEEECC--CTGGGSSSEEEEEEEEEEEBSS
T ss_pred EehhHcCCCCEEEEEEEccCCC-CceEEEeccC---------CCCCcCCeEEEeCC--CHHHhcCCceEEEEEEeeEECC
Confidence 5677889999999999998773 2111122110 13345777755442 112235899999999988 454
Q ss_pred -CeEEEEeCCeeeEe
Q psy16421 80 -PSIMWRREGGEMIT 93 (151)
Q Consensus 80 -~~~~W~~~~~~~~~ 93 (151)
+.+.|++ +++.+.
T Consensus 140 ~~~v~W~k-~g~~l~ 153 (207)
T 2vol_A 140 DITVEWES-NGQPAE 153 (207)
T ss_dssp CCEEEEEE-TTEECS
T ss_pred CCEEEEEE-CCEecc
Confidence 4899999 566543
No 222
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.04 E-value=7.8e-11 Score=81.08 Aligned_cols=95 Identities=14% Similarity=0.193 Sum_probs=63.6
Q ss_pred CCCCeeEeCCCCCceEeecCCeEEEEeeecCC-CCCeEEEEeCCeeeEecccC---------------------------
Q psy16421 46 SMPPDILDYPTSSDIMVREGSNVSMRCAASGS-PPPSIMWRREGGEMITNSFN--------------------------- 97 (151)
Q Consensus 46 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-~~~~~~W~~~~~~~~~~~~~--------------------------- 97 (151)
..+|.|.... ...+.+|+.+.|.|.+.+. |.+.+.|++ +++.+.....
T Consensus 5 ~~~P~~~~~~---~~~v~~G~~v~l~C~~~~~~p~~~v~W~~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 80 (317)
T 2y25_A 5 FTGPHFVEYL---SWEVTGECNVLLKCKVANIKKETHIVWYK-DEREISVDEKHDFKDGICTLLITEFSKKDAGIYEVIL 80 (317)
T ss_dssp SSCCEEEEEE---EEEEETTTEEEEEEEEESCCTTCEEEEEE-TTEEECCSCC-----CCEEEEETTCCSTTCSCEEEEE
T ss_pred cCCCcEeeee---eEEECCCCeEEEEEEEcCCCCCCEEEEEE-CCeEcCCCCcEEEECCeEEEEEccCCcccCeEEEEEE
Confidence 4578787543 4788899999999998886 779999999 5555543221
Q ss_pred -CCC-------------CCeeeeCCceeEeecCCcEEEEeeecc----------cCCCeeEEEcCCceecc
Q psy16421 98 -NTV-------------PPIVKIPSQLIGAHEGQQLVLECISEA----------YPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 -~~~-------------~p~~~~~~~~~~~~~g~~~~l~C~~~g----------~p~~~~~W~k~~~~~~~ 144 (151)
+.. +|.+...+....+..|+.+.|.|.+.+ .|.+.+.|+|+|..+..
T Consensus 81 ~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~ 151 (317)
T 2y25_A 81 KDDRGKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRY 151 (317)
T ss_dssp ESSSCEEEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCC
T ss_pred ECCCCcEEEEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCC
Confidence 000 000000111223457888888888877 78999999999876654
No 223
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.04 E-value=3.1e-10 Score=78.02 Aligned_cols=108 Identities=13% Similarity=0.181 Sum_probs=65.4
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.++..+|.|.|+|.|.|..+. ......+. +.+..+|.+...+. ....+.+|+.+.|.|.+.|.|.|
T Consensus 176 i~~~~~~d~g~Y~C~a~n~~~~-~~~~~~~~-----------l~V~~~P~~~~~~~-~~~~~~~g~~v~l~C~~~g~P~p 242 (308)
T 4fom_A 176 LFPTRFARGRRITCVVKHPALE-KDIRYSFI-----------LDIQYAPEVSVTGY-DGNWFVGRKGVNLKCNADANPPP 242 (308)
T ss_dssp ECCCGGGTTCEEEEEEECTTCS-SCEEEEEE-----------CCCCEEEEECCBCC-CSCEETTCCSCEEECCEEEESCE
T ss_pred EEeeeecCCccEEEEEEccCCC-CceEEeEE-----------EEEecCCeeEEccc-ceeeeeccccEEEEEEEecCCCC
Confidence 3567889999999999998763 22222222 33345666654442 34566778999999999999988
Q ss_pred -eEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeec
Q psy16421 81 -SIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISE 126 (151)
Q Consensus 81 -~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 126 (151)
.+.|+++ +..+...........+.+. .+...+.....|.|.
T Consensus 243 ~~v~W~k~-~~~~~~~~~~~~~~~l~i~----~v~~~d~G~Y~C~A~ 284 (308)
T 4fom_A 243 FKSVWSRL-DGQWPDGLLASDNTLHFVH----PLTFNYSGVYICKVT 284 (308)
T ss_dssp EEEECCBS-SSCCCSSCBCSTTEEECCS----CCCSCCCSEEEEEEE
T ss_pred cEEEEEEC-CeECCCcEEEcCCeEEEEC----CCChhhCEEEEEEEE
Confidence 6999994 4443321101101111111 133455668889875
No 224
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.04 E-value=5.9e-10 Score=72.35 Aligned_cols=36 Identities=19% Similarity=0.370 Sum_probs=30.2
Q ss_pred CceeEeecCCcEEEEeeecccCCCeeEEEcCCceec
Q psy16421 108 SQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMI 143 (151)
Q Consensus 108 ~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~ 143 (151)
.....+..|..+.+.|.+.|.|+|.++|+|++..+.
T Consensus 125 ~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~ 160 (218)
T 4frw_A 125 GPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTT 160 (218)
T ss_dssp CSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEE
T ss_pred eeeeeeeeccccceeeeccCCcCceEEEEECCcccc
Confidence 444556789999999999999999999999876554
No 225
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.04 E-value=1.4e-10 Score=81.12 Aligned_cols=86 Identities=13% Similarity=0.225 Sum_probs=46.1
Q ss_pred CccccccCCeEEEEEEEcCCCCCC---ccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeec--
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSV---SKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAAS-- 75 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~---~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~-- 75 (151)
|.+++.+|+|.|+|.|.|..+... +..+.|.|.... ....+|.+..........+.+|+.+.|.|.+.
T Consensus 181 i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~-------~~~~~p~i~~~~~~~~~~v~~G~~v~l~C~~~~~ 253 (349)
T 4dep_C 181 FLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSP-------KNAVPPVIHSPNDHVVYEKEPGEELLIPCTVYFS 253 (349)
T ss_dssp EESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCG-------GGCCSCEEC----------------CCCEEEEEC
T ss_pred EeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccC-------CCCCCCeEecCCCceeEEEecCCcEEEEEEEEEc
Confidence 568899999999999999863232 445555553110 00125666554421112677899999999988
Q ss_pred --CCCCCeEEEEeCCeeeEec
Q psy16421 76 --GSPPPSIMWRREGGEMITN 94 (151)
Q Consensus 76 --g~~~~~~~W~~~~~~~~~~ 94 (151)
+.|.|.+.|++ +++.+..
T Consensus 254 ~~g~p~p~v~W~~-~g~~l~~ 273 (349)
T 4dep_C 254 FLMDSRNEVWWTI-DGKKPDD 273 (349)
T ss_dssp CCTTCCCEEEEES-SCC----
T ss_pred cCCCCCCEEEEEE-CCEEccc
Confidence 67899999999 5665543
No 226
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.04 E-value=7.7e-10 Score=74.37 Aligned_cols=84 Identities=18% Similarity=0.177 Sum_probs=53.3
Q ss_pred CccccccCCeEEEEEEEcCCCC---CCccceEEEEecccccee-EEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP---SVSKRIMLIVQCQYFSKL-YIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~---~~~~~~~l~v~~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g 76 (151)
|.+++.+|+|.|.|.+.|..+. .......|.|........ ....+..++.+...+ ....+.+|+++.|.|.+.+
T Consensus 90 I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p--~~~~v~~G~~v~L~C~~~~ 167 (257)
T 3gkz_A 90 LKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSP--AIMSASPGEKVTLTCSASS 167 (257)
T ss_dssp ECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSC--SEEEECTTCCEEEEEEESS
T ss_pred ECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCC--ceEEEeCCCcEEEEEEEcc
Confidence 5789999999999999997321 123345565541100000 000001234555544 5678889999999999999
Q ss_pred CCCC-eEEEEe
Q psy16421 77 SPPP-SIMWRR 86 (151)
Q Consensus 77 ~~~~-~~~W~~ 86 (151)
.+.+ .+.|++
T Consensus 168 ~~~~~~v~W~k 178 (257)
T 3gkz_A 168 SVSSSHLYWYQ 178 (257)
T ss_dssp CCCGGGEEEEE
T ss_pred CccceEEEEEE
Confidence 8877 899998
No 227
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.03 E-value=2.2e-10 Score=66.57 Aligned_cols=47 Identities=19% Similarity=0.385 Sum_probs=41.5
Q ss_pred CCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccCC
Q psy16421 100 VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIANG 146 (151)
Q Consensus 100 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~~ 146 (151)
.||.|...+....+.+|+++.|.|.+.|.|.|.+.|+|||..+....
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~ 50 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQE 50 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTG
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeec
Confidence 57888888888999999999999999999999999999987775543
No 228
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.03 E-value=1e-09 Score=71.86 Aligned_cols=83 Identities=16% Similarity=0.182 Sum_probs=58.2
Q ss_pred CceEeecC--CeEEEEeeecCCCCCeEEEEeC--CeeeEecccC------------------------------------
Q psy16421 58 SDIMVREG--SNVSMRCAASGSPPPSIMWRRE--GGEMITNSFN------------------------------------ 97 (151)
Q Consensus 58 ~~~~~~~g--~~~~l~C~~~g~~~~~~~W~~~--~~~~~~~~~~------------------------------------ 97 (151)
..+.+.+| +.+.|.|.+.+ |.+.+.|++. ++..+.....
T Consensus 15 ~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~ 93 (213)
T 2x1w_L 15 GVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWDSKKGFTIPSYMISYAGMVFCEAKINDESYQSI 93 (213)
T ss_dssp EEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEETTTEEEEEGGGTTTCSEEEEEEC----CEECC
T ss_pred eEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCcccccCCccEEEccCChhcCceEEEEEEECCeeEEEE
Confidence 46778899 99999999987 7789999884 4554332110
Q ss_pred -----CC--CCCeeeeC-CceeEeecCCcEEEEeeecccCC--CeeEEEcCCce
Q psy16421 98 -----NT--VPPIVKIP-SQLIGAHEGQQLVLECISEAYPK--SVNYWTREKGD 141 (151)
Q Consensus 98 -----~~--~~p~~~~~-~~~~~~~~g~~~~l~C~~~g~p~--~~~~W~k~~~~ 141 (151)
+. .+|.+... +..+.+.+|+++.|.|.+.|.|. +.+.|+++|..
T Consensus 94 ~~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~ 147 (213)
T 2x1w_L 94 MYIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSK 147 (213)
T ss_dssp CEEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSS
T ss_pred EEEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCc
Confidence 00 12223332 34447899999999999998654 46999998765
No 229
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.02 E-value=7.7e-10 Score=73.97 Aligned_cols=85 Identities=18% Similarity=0.291 Sum_probs=51.8
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccc---eeE---EeecCCCCeeEeCCCCCceEeecCCeEEEEeee
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFS---KLY---IYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA 74 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~---~~~---~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~ 74 (151)
|.+++.+|+|.|.|.+.|..+........|.|...... ... ......++.+...+ ....+.+|+++.|.|.+
T Consensus 78 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~G~~v~L~C~~ 155 (250)
T 3esu_F 78 ISNLEQEDIGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQS--GPELVKPGASVKISCKD 155 (250)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC------------------------CEEC--CCEEECTTCCEEEEEEC
T ss_pred EccCChhhCEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecC--CceEEcCCceEEEEEEe
Confidence 57899999999999999876643444556666421000 000 00000112222223 45678899999999999
Q ss_pred cCCC--CCeEEEEeC
Q psy16421 75 SGSP--PPSIMWRRE 87 (151)
Q Consensus 75 ~g~~--~~~~~W~~~ 87 (151)
.+.+ .+.+.|++.
T Consensus 156 ~~~~~~~~~v~W~k~ 170 (250)
T 3esu_F 156 SGYAFSSSWMNWVKQ 170 (250)
T ss_dssp CSTTGGGSEEEEEEE
T ss_pred cCCcccCCEEEEEEE
Confidence 8876 789999984
No 230
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.02 E-value=1.6e-09 Score=70.68 Aligned_cols=86 Identities=15% Similarity=0.269 Sum_probs=57.0
Q ss_pred ceEeecCCeEEEEeeecCCCCCeEEEEeCC--eeeE----------------------------ecccC-----------
Q psy16421 59 DIMVREGSNVSMRCAASGSPPPSIMWRREG--GEMI----------------------------TNSFN----------- 97 (151)
Q Consensus 59 ~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~--~~~~----------------------------~~~~~----------- 97 (151)
.+.+.+|+++.|.|.+.+.+.+.+.|++.+ ..+. ....-
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 88 (213)
T 3mj8_L 9 LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQ 88 (213)
T ss_dssp EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEE
T ss_pred cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEE
Confidence 456788999999999999999999999821 1110 00000
Q ss_pred ------------------CC----CCCeeeeCCceeEeecCCcEEEEeeeccc-CC-CeeEEEcCCceecc
Q psy16421 98 ------------------NT----VPPIVKIPSQLIGAHEGQQLVLECISEAY-PK-SVNYWTREKGDMIA 144 (151)
Q Consensus 98 ------------------~~----~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-~~~~W~k~~~~~~~ 144 (151)
+. .+|.+...+....+.+|+.+.|.|.+.|. |+ +.++|+|+|..+..
T Consensus 89 ~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 159 (213)
T 3mj8_L 89 SWDGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQ 159 (213)
T ss_dssp EEETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred eccCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCC
Confidence 01 23444433333334479999999999985 44 38999999877643
No 231
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.02 E-value=3.5e-10 Score=74.45 Aligned_cols=80 Identities=16% Similarity=0.242 Sum_probs=51.5
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~~ 79 (151)
|.+++.+|+|.|+|.+.|..+. ......+... +.+..+|.+...+. .....+|+.+.|.|.+.| .|.
T Consensus 80 I~~~~~~D~g~Y~C~~~~~~~~-~~~~~~v~~~---------~~~~~~P~v~~~~~--~~~~~~g~~~~L~C~~~g~~P~ 147 (218)
T 2rgs_A 80 IQHQDWMSGKEFKCKVNNKDLP-SPIERTISKI---------KGLVRAPQVYILPP--PAEQLSRKDVSLTCLVVGFNPG 147 (218)
T ss_dssp CCHHHHHTTCCEEEEEEETTCS-SCEEEEECCC---------CCCCBCCEEEEECC--CGGGTTSSEEEEEEEEEEEBSS
T ss_pred EcHHHcCCCCeEEEEEECCcCC-CcceEEEeec---------CCCCCCCEEEEECC--ChHHhcCCceEEEEEEEeeeCC
Confidence 5678889999999999998652 2111111100 13345676654432 122235899999999988 566
Q ss_pred C-eEEEEeCCeeeEe
Q psy16421 80 P-SIMWRREGGEMIT 93 (151)
Q Consensus 80 ~-~~~W~~~~~~~~~ 93 (151)
+ .+.|++ +++.+.
T Consensus 148 ~~~v~W~k-~g~~~~ 161 (218)
T 2rgs_A 148 DISVEWTS-NGHTEE 161 (218)
T ss_dssp CCEEEEEE-TTEEEC
T ss_pred CcEEEEEE-CCEecc
Confidence 5 899999 565553
No 232
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.02 E-value=2.8e-09 Score=69.43 Aligned_cols=30 Identities=23% Similarity=0.563 Sum_probs=26.5
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEeC
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRRE 87 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~ 87 (151)
..+.+.+|+++.|.|.+.+.+.+.+.|++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~ 37 (210)
T 1lk3_L 8 PALTVSPGEKLTISCKASESVTSRMHWYQQ 37 (210)
T ss_dssp SEEEECTTSCEEEEEEESSCCTTCEEEEEE
T ss_pred CcEEEcCCCCEEEEeeCCCccCCCEEEEEE
Confidence 467788999999999999988889999983
No 233
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.02 E-value=1.5e-09 Score=71.41 Aligned_cols=89 Identities=15% Similarity=0.191 Sum_probs=62.6
Q ss_pred CceEeecCCeEEEEeeecCCCC-CeEEEEeCCeee------------------Ee----------ccc-C----------
Q psy16421 58 SDIMVREGSNVSMRCAASGSPP-PSIMWRREGGEM------------------IT----------NSF-N---------- 97 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~-~~~~W~~~~~~~------------------~~----------~~~-~---------- 97 (151)
..+.+.+|+++.|.|.+.+.+. +.+.|++.+... +. ... .
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~L~i~~v~~~ 87 (231)
T 2pet_A 8 PLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQGRLVLAEAQVG 87 (231)
T ss_dssp SEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTTCCEEESSCCGG
T ss_pred CcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCCceEEEcccCcc
Confidence 4577889999999999999884 899999733220 00 010 0
Q ss_pred ------------------------C---CCCCeeeeCCceeEeecCCcE-EEEeee-cccCCCeeEEEcCCceeccCC
Q psy16421 98 ------------------------N---TVPPIVKIPSQLIGAHEGQQL-VLECIS-EAYPKSVNYWTREKGDMIANG 146 (151)
Q Consensus 98 ------------------------~---~~~p~~~~~~~~~~~~~g~~~-~l~C~~-~g~p~~~~~W~k~~~~~~~~~ 146 (151)
+ ...|.+...+....+.+|+.+ .|.|.+ .|.|.|.+.|+|+|..+....
T Consensus 88 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~ 165 (231)
T 2pet_A 88 DERDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPV 165 (231)
T ss_dssp GCEEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCS
T ss_pred cCceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCcccc
Confidence 1 112444555555566789988 999999 899999999999987665443
No 234
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.02 E-value=1.5e-09 Score=69.26 Aligned_cols=83 Identities=16% Similarity=0.169 Sum_probs=58.5
Q ss_pred ceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEec------------------------c--cC---------------
Q psy16421 59 DIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITN------------------------S--FN--------------- 97 (151)
Q Consensus 59 ~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~------------------------~--~~--------------- 97 (151)
.+.+.+|+++.|.|.+.+.+.+.+.|++++...+.. . ..
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 457789999999999999899999999954321110 0 00
Q ss_pred -----CC-CCC-----eeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCcee
Q psy16421 98 -----NT-VPP-----IVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDM 142 (151)
Q Consensus 98 -----~~-~~p-----~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~ 142 (151)
.. ... .+.. +....+.+|+++.|.|.+.+.|.|.+.|++++..+
T Consensus 84 ~C~~~~~~~~~~l~V~~~~~-~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~ 138 (184)
T 2ny1_B 84 ICEVEDQKEEVQLLVFGLTA-NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN 138 (184)
T ss_dssp EEEETTEEEEEEEEEEEEEE-SSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCE
T ss_pred EEEEEcCCCcEEEEEEEecC-CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc
Confidence 00 000 1112 33456789999999999999999999999987654
No 235
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.02 E-value=4.9e-10 Score=65.92 Aligned_cols=48 Identities=19% Similarity=0.344 Sum_probs=42.2
Q ss_pred CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccCC
Q psy16421 99 TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIANG 146 (151)
Q Consensus 99 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~~ 146 (151)
..||.|...+..+.+.+|+++.|.|.+.|.|.|.++|+|||..+..+.
T Consensus 11 ~~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~ 58 (107)
T 3knb_B 11 GSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASE 58 (107)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCS
T ss_pred CCCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECccccccee
Confidence 457889888889999999999999999999999999999987775443
No 236
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.01 E-value=1.4e-09 Score=69.64 Aligned_cols=93 Identities=18% Similarity=0.235 Sum_probs=59.0
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeee-cCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA-SGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~-~g~~~ 79 (151)
|.+++.+|+|.|.|.+.+.. .....+.|.|. .....|.+. ..+..+.|.|.+ .| |.
T Consensus 73 I~~v~~~D~G~Y~C~v~~~~--~~~~~~~L~V~----------~~~~~P~i~----------~~~~~v~L~C~~~~g-p~ 129 (180)
T 2dru_A 73 IYNVSKEDRGDYYMRMLHET--EDQWKITMEVY----------EMVSKPMIY----------WECSNATLTCEVLEG-TD 129 (180)
T ss_dssp ECSCCGGGCEEEEEEEESSS--EEEEEEEEEEE----------CCCCCCEEE----------EEGGGTEEEEECSSC-TT
T ss_pred EcCCCHHHCeEEEEEEEcCC--eEEEEEEEEEE----------CCCCCCEEE----------ecCCCEEEEEEeCCC-CC
Confidence 67899999999999997764 33445556553 111223222 234679999999 77 99
Q ss_pred CeEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
|.+.|++ +++.+.. .....+.. .. ..+....+|.+..
T Consensus 130 p~i~W~~-~~~~l~~----~~~~~l~~-----~~-~~d~g~Y~C~a~N 166 (180)
T 2dru_A 130 VELKLYQ-GKEHLRS----LRQKTMSY-----QW-TNLRAPFKCKAVN 166 (180)
T ss_dssp CEEEEEE-TTEEEEE----ESSSEEEE-----EC-SCCSSCEEEEEEE
T ss_pred CEEEEEE-CCeECcC----CCCCEEEE-----EE-hhcCccEEEEEec
Confidence 9999999 5555541 11112221 11 4567789998854
No 237
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.01 E-value=6.4e-10 Score=71.04 Aligned_cols=93 Identities=15% Similarity=0.260 Sum_probs=62.1
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.+.|..+ .+.|.|. . +... ....+.+|+.+.|.|.+.+.|.+
T Consensus 72 i~~v~~~D~G~Y~C~~~~~~~-----~~~l~V~-------------~---~~~~---~~~~v~~g~~~~l~C~~~~~p~~ 127 (184)
T 2ny1_B 72 IKNLKIEDSDTYICEVEDQKE-----EVQLLVF-------------G---LTAN---SDTHLLQGQSLTLTLESPPGSSP 127 (184)
T ss_dssp ECSCCGGGCEEEEEEETTEEE-----EEEEEEE-------------E---EEES---SCSEEETTCCEEEEEECCTTCCC
T ss_pred EecCCHHHCEEEEEEEEcCCC-----cEEEEEE-------------E---ecCC---CCceeecCCCEEEEEEcCCCCCC
Confidence 568899999999999987643 3445543 0 1111 23467889999999999888999
Q ss_pred eEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 81 SIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 81 ~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
.+.|+++++.... ....+.+.. +...+.....|.+..
T Consensus 128 ~v~W~~~~~~~~~------~~~~L~i~~----v~~~d~G~Y~C~a~n 164 (184)
T 2ny1_B 128 SVQCRSPRGKNIQ------GGKTLSVSQ----LELQDSGTWTCTVLQ 164 (184)
T ss_dssp EEEEECTTSCEEE------ESSEEEESS----CCGGGCEEEEEEEEE
T ss_pred EEEEEeCCCcccc------CceEEEEec----CCcCCCeEEEEEEEE
Confidence 9999995433211 112333322 345667788888764
No 238
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.01 E-value=1.4e-09 Score=74.28 Aligned_cols=84 Identities=15% Similarity=0.222 Sum_probs=52.9
Q ss_pred CccccccCCeEEEEEEEcCCCC----CCccceEEEEeccccce-eEEe-ecCCCCeeEeCCCCCceEeecCCeEEEEeee
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP----SVSKRIMLIVQCQYFSK-LYIY-TSSMPPDILDYPTSSDIMVREGSNVSMRCAA 74 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~----~~~~~~~l~v~~~~~~~-~~~~-~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~ 74 (151)
|.+++.+|+|.|.|.+.|..|. .....+.|.|....... ...+ ....++.+...+ ..+.+.+|+++.|.|.+
T Consensus 109 I~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~v~~G~~v~L~C~~ 186 (282)
T 1qok_A 109 LSSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSP--AIMSASPGEKVTITCSA 186 (282)
T ss_dssp ECSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEEC--SEEEECTTCCEEEEEEE
T ss_pred ECcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCC--CEEEEcCCCcEEEEEEe
Confidence 5789999999999999998651 11234456664211000 0000 001233444434 45678899999999999
Q ss_pred cCCCCCeEEEEeC
Q psy16421 75 SGSPPPSIMWRRE 87 (151)
Q Consensus 75 ~g~~~~~~~W~~~ 87 (151)
.+.+ +.+.|++.
T Consensus 187 ~~~~-~~v~W~k~ 198 (282)
T 1qok_A 187 SSSV-SYMHWFQQ 198 (282)
T ss_dssp SSCC-SCCEEEEE
T ss_pred cCCC-ceEEEEEE
Confidence 9988 89999983
No 239
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.00 E-value=8.1e-10 Score=73.75 Aligned_cols=85 Identities=19% Similarity=0.197 Sum_probs=50.2
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCC--
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSP-- 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~-- 78 (151)
|.+++.+|+|.|.|.+.|..+........|.|...............++.....+ ....+.+|+++.|.|.+.+.+
T Consensus 75 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~G~~v~L~C~~~g~~~~ 152 (242)
T 2znx_A 75 INSVETEDFGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQES--GPSLVKPSQTLSLTCSVTGDSIT 152 (242)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEE--CCSEECTTSCEEEEEEEESSCGG
T ss_pred ECCCChHHCEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecC--CcceecCCCeEEEEEEEEccccC
Confidence 5789999999999999987543233445666642110000000000111122222 234688999999999998865
Q ss_pred CCeEEEEeC
Q psy16421 79 PPSIMWRRE 87 (151)
Q Consensus 79 ~~~~~W~~~ 87 (151)
.+.+.|++.
T Consensus 153 ~~~v~W~k~ 161 (242)
T 2znx_A 153 SDYXSXIRK 161 (242)
T ss_dssp GSCEEEEEE
T ss_pred CcceeeEee
Confidence 578999984
No 240
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.00 E-value=4.1e-10 Score=76.18 Aligned_cols=84 Identities=19% Similarity=0.377 Sum_probs=54.1
Q ss_pred CccccccCCeEEEEEEEcCCC-CCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVP-PSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~-~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++.+|+|.|.|.+.+... ........|.|... +....+|.+..... ....+.+|+.+.|.|.+.|.++
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~-------~~~~~~P~v~~~~~-~~~~~~~g~~v~L~C~~~g~~p 175 (268)
T 3pl6_D 104 IQRTERGDSAVYLCATSALGDTQYFGPGTRLTVLED-------LKNVFPPEVAVFEP-SEAEISHTQKATLVCLATGFYP 175 (268)
T ss_dssp ECSCCGGGCEEEEEEEESSSSSCEECCCEEEEEESC-------GGGCBCCEEEEECC-CHHHHHHHSEEEEEEEEEEEBS
T ss_pred ECCCCcccCEEEEEEEecCCCceeeCCcEEEEEecC-------cccccCCceEEeCC-CcccccCCCceEEEEEECcccC
Confidence 578999999999999998521 12334455666421 11123555443221 3344556999999999988554
Q ss_pred C--eEEEEeCCeeeEe
Q psy16421 80 P--SIMWRREGGEMIT 93 (151)
Q Consensus 80 ~--~~~W~~~~~~~~~ 93 (151)
+ .+.|++ +++.+.
T Consensus 176 ~~~~v~W~~-~g~~l~ 190 (268)
T 3pl6_D 176 DHVELSWWV-NGKEVH 190 (268)
T ss_dssp SCEEEEEEE-SSSEEC
T ss_pred CCeEEEEEE-CCEECC
Confidence 4 899999 676664
No 241
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.00 E-value=3.2e-09 Score=70.16 Aligned_cols=29 Identities=24% Similarity=0.550 Sum_probs=26.4
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEe
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRR 86 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~ 86 (151)
..+.+.+|+++.|.|.+.+.+.+.+.|++
T Consensus 32 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k 60 (237)
T 3sob_L 32 SSLSASVGDRVTITCRASQDVSTAVAWYQ 60 (237)
T ss_dssp SEEEEETTCCEEEEEEESSCCTTCEEEEE
T ss_pred CeEEEeCCCcEEEEEecCCCCCceEEEEE
Confidence 46788899999999999998899999998
No 242
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.00 E-value=2.8e-09 Score=73.94 Aligned_cols=86 Identities=16% Similarity=0.336 Sum_probs=57.7
Q ss_pred CceEeecCCeEEEEeeecCC-CCCeEEEEeCCeee---Eec-------------------c-cC----------------
Q psy16421 58 SDIMVREGSNVSMRCAASGS-PPPSIMWRREGGEM---ITN-------------------S-FN---------------- 97 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~-~~~~~~W~~~~~~~---~~~-------------------~-~~---------------- 97 (151)
..+.+.+|+++.|.|.+.+. |.+.+.|++++... +.. . ..
T Consensus 11 ~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 90 (327)
T 2wng_A 11 KSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYY 90 (327)
T ss_dssp SEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEE
T ss_pred CceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEEE
Confidence 56788899999999999887 88899999953210 100 0 00
Q ss_pred ----CCCC----------Ceeee---------CCceeEeecCCcEEEEeeecccCCC--eeEEEcCCceec
Q psy16421 98 ----NTVP----------PIVKI---------PSQLIGAHEGQQLVLECISEAYPKS--VNYWTREKGDMI 143 (151)
Q Consensus 98 ----~~~~----------p~~~~---------~~~~~~~~~g~~~~l~C~~~g~p~~--~~~W~k~~~~~~ 143 (151)
+... ..+.+ ......+.+|+.+.|.|.+.|.|++ .+.|+|+|..+.
T Consensus 91 C~a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~ 161 (327)
T 2wng_A 91 CVKFRKGSPDTEFKSGAGTELSVRAKPSAPVVSGPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELS 161 (327)
T ss_dssp EEEEESSTTCEEEEECCCEEEEEEBCCCCCEEECCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred EEeecCCCcceeEeecCcEEEEEEecCCCceeeccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEcc
Confidence 0000 01111 0112456889999999999998876 799999976654
No 243
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=98.99 E-value=3.6e-10 Score=78.68 Aligned_cols=81 Identities=21% Similarity=0.434 Sum_probs=58.2
Q ss_pred CccccccCCeEEEEEEEcCCCCC---CccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeee---
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPS---VSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA--- 74 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~---~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~--- 74 (151)
|.+++.+|+|.|+|.+.|..+.. .+..+.|.|... ....+|.+...+ ....+.+|+.+.|.|.+
T Consensus 184 i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~--------~~~~~P~i~~~~--~~~~v~~G~~v~L~C~~~~~ 253 (339)
T 3o4o_C 184 VHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKK--------KEETIPVIISPL--KTISASLGSRLTIPCKVFLG 253 (339)
T ss_dssp ESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECC--------CCCCCCEECCCS--CCCCCCCCSCCCCCCCEEES
T ss_pred EcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcC--------CCCCCCEEecCC--ceeEeccCCCEEEEEEEECC
Confidence 56789999999999999987642 234455555321 011356665554 56678889999999999
Q ss_pred cCCC-CCeEEEEeCCeeeE
Q psy16421 75 SGSP-PPSIMWRREGGEMI 92 (151)
Q Consensus 75 ~g~~-~~~~~W~~~~~~~~ 92 (151)
.|.| .+.+.|++ ++..+
T Consensus 254 ~g~P~~~~v~W~~-~g~~~ 271 (339)
T 3o4o_C 254 TGTPLTTMLWWTA-NDTHI 271 (339)
T ss_dssp SSCCSSCEEEEES-SSSCS
T ss_pred CCCCCCceEEEEE-CCeec
Confidence 8999 88999998 56554
No 244
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.99 E-value=4e-10 Score=75.22 Aligned_cols=85 Identities=19% Similarity=0.359 Sum_probs=54.5
Q ss_pred CccccccCCeEEEEEEEcCCCC---CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP---SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~---~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~ 77 (151)
|.+++.+|+|.|.|.+.+..+. .......|.|... +....+|.+..... ....+.+|+.+.|.|.+.|.
T Consensus 81 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~-------~~~~~~P~i~~~~~-~~~~~~~g~~v~L~C~~~g~ 152 (246)
T 4dzb_B 81 VTSAHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLED-------LKNVFPPEVAVFEP-SEAEISHTQKATLVCLATGF 152 (246)
T ss_dssp ECSCCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESC-------GGGCBCCEEEEECC-CHHHHHHHSEEEEEEEEEEE
T ss_pred ECCCCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecC-------CCcccCCceEeecC-CchhccCCCcEEEEEEEccC
Confidence 5789999999999999876431 2223445665410 00123455433221 33445679999999999886
Q ss_pred CCC--eEEEEeCCeeeEec
Q psy16421 78 PPP--SIMWRREGGEMITN 94 (151)
Q Consensus 78 ~~~--~~~W~~~~~~~~~~ 94 (151)
+++ .+.|++ +++.+..
T Consensus 153 ~p~~~~v~W~k-~g~~l~~ 170 (246)
T 4dzb_B 153 YPDHVELSWWV-NGKEVHS 170 (246)
T ss_dssp BSSCEEEEEEE-TTEEECT
T ss_pred cCCceEEEEEE-CCEECCC
Confidence 654 899999 6766653
No 245
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.99 E-value=1.3e-09 Score=74.17 Aligned_cols=85 Identities=19% Similarity=0.269 Sum_probs=52.0
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEee-cCCCCeeEeCCCCCceEeecCCeEEEEeeecCCC-
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYT-SSMPPDILDYPTSSDIMVREGSNVSMRCAASGSP- 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~- 78 (151)
|.+++.+|+|.|.|.+.|..+........|.|..........+. ...++.+...+ ....+.+|+++.|.|.+.+.+
T Consensus 86 I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p--~~~~v~~G~~v~L~C~~~g~~~ 163 (276)
T 3auv_A 86 ISSLQPEDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVES--GGGLVQPGGSLRLSCAASGFTI 163 (276)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEE--CCEEECTTCCEEEEEEEESSCG
T ss_pred EccCChhhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECC--CceEecCCCeEEEEEEecCccC
Confidence 57899999999999999986533444456665421100000000 00112222323 457888999999999998866
Q ss_pred -CCeEEEEeC
Q psy16421 79 -PPSIMWRRE 87 (151)
Q Consensus 79 -~~~~~W~~~ 87 (151)
.+.+.|++.
T Consensus 164 ~~~~v~W~k~ 173 (276)
T 3auv_A 164 SDYWIHWVRQ 173 (276)
T ss_dssp GGSEEEEEEE
T ss_pred CCCEEEEEEc
Confidence 589999984
No 246
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=98.99 E-value=2.1e-09 Score=70.06 Aligned_cols=30 Identities=23% Similarity=0.489 Sum_probs=25.4
Q ss_pred CceEeecCCeEEEEeeecCCC---CCeEEEEeC
Q psy16421 58 SDIMVREGSNVSMRCAASGSP---PPSIMWRRE 87 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~---~~~~~W~~~ 87 (151)
..+.+.+|+++.|.|.+.+.+ .+.+.|++.
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~ 40 (212)
T 1q0x_L 8 SALTTSPGETVTLTCRSSTGAVTTSNYANWVQE 40 (212)
T ss_dssp SEEEECTTCCEEEEEEESSSCCCGGGCCEEEEE
T ss_pred CeEeecCCCCEEEEEEecccccCCCCeEEEEEe
Confidence 467788999999999998877 478999984
No 247
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.99 E-value=2.5e-09 Score=71.94 Aligned_cols=85 Identities=14% Similarity=0.149 Sum_probs=53.5
Q ss_pred CccccccCCeEEEEEEEcCCCC--CCccceEEEEeccccceeE----EeecCCCCeeEeCCCCCceEeecCCeEEEEeee
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP--SVSKRIMLIVQCQYFSKLY----IYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA 74 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~~~~~~~~----~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~ 74 (151)
|.+++.+|+|.|.|.+.|..+. .......|.|......+.. .......+.+...+ ..+.+.+|+++.|.|.+
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p--~~~~v~~G~~v~L~C~~ 160 (259)
T 3omz_A 83 LRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQ--SSVSMPVRKAVTLNCLY 160 (259)
T ss_dssp ESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCC--CCEEEETTCCEEECCEE
T ss_pred ECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeC--CEEEEcCCCCEEEEEEC
Confidence 5789999999999999987652 2334455666421100000 00000134444444 56788999999999998
Q ss_pred cCC-CCCeEEEEeC
Q psy16421 75 SGS-PPPSIMWRRE 87 (151)
Q Consensus 75 ~g~-~~~~~~W~~~ 87 (151)
.+. +.+.+.|++.
T Consensus 161 ~~~~~~~~v~W~k~ 174 (259)
T 3omz_A 161 ETSWWSYYIFWYKR 174 (259)
T ss_dssp ECCCSSCEEEEEEE
T ss_pred CCccCCceEEEeee
Confidence 774 7889999983
No 248
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.99 E-value=6.9e-10 Score=74.73 Aligned_cols=84 Identities=15% Similarity=0.149 Sum_probs=51.5
Q ss_pred CccccccCCeEEEEEEEcCCCC--------CCccceEEEEecccccee-EEe-ecCCCCeeEeCCCCCceEeecCCeEEE
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP--------SVSKRIMLIVQCQYFSKL-YIY-TSSMPPDILDYPTSSDIMVREGSNVSM 70 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~--------~~~~~~~l~v~~~~~~~~-~~~-~~~~~p~~~~~~~~~~~~~~~g~~~~l 70 (151)
|.+++.+|+|.|.|.+.|..|. .......|.|........ ..+ ....++.+...+ ..+.+.+|+++.|
T Consensus 82 I~~v~~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p--~~~~v~~G~~v~L 159 (257)
T 1f3r_B 82 MNSLQTDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSP--SLLSASVGDRVTL 159 (257)
T ss_dssp EESCCTTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEET--SEECCCTTCCEEE
T ss_pred ECCCCcccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccC--CEEEEcCCCCEEE
Confidence 5689999999999999998531 112334555542100000 000 000112222222 4566789999999
Q ss_pred EeeecCCCCCeEEEEe
Q psy16421 71 RCAASGSPPPSIMWRR 86 (151)
Q Consensus 71 ~C~~~g~~~~~~~W~~ 86 (151)
.|.+.+.+.+.+.|++
T Consensus 160 ~C~~~~~~~~~v~W~k 175 (257)
T 1f3r_B 160 SCKGSQNINNYLAWYQ 175 (257)
T ss_dssp EEECSSCCBTCEEEEE
T ss_pred EEEECCcCCCcEEEEE
Confidence 9999998888999999
No 249
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=98.99 E-value=4.7e-09 Score=68.70 Aligned_cols=31 Identities=26% Similarity=0.456 Sum_probs=26.8
Q ss_pred EeecCCcEEEEeeecccCCCeeEEEcCCcee
Q psy16421 112 GAHEGQQLVLECISEAYPKSVNYWTREKGDM 142 (151)
Q Consensus 112 ~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~ 142 (151)
.+.+|+.+.|.|.+.|.|.|.++|+++++..
T Consensus 127 ~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~ 157 (222)
T 3sbw_C 127 VDPVTSEHELTCQAEGYPKAEVIWTSSDHQV 157 (222)
T ss_dssp EETTTTEEEEEEEEEEBSCCEEEEEETTCCE
T ss_pred eecCCCcEEEEEEecCCCCCeEEEEECCCce
Confidence 4578999999999999999999999984433
No 250
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.98 E-value=1.7e-09 Score=72.79 Aligned_cols=69 Identities=25% Similarity=0.445 Sum_probs=49.8
Q ss_pred CccccccCCeEEEEEEEcCCCCC-CccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeee---cC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPS-VSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA---SG 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~-~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~---~g 76 (151)
|.+++.+|+|.|+|.+.|..+.. ....+.|.|. ... + ....+.+|+++.|.|.+ .+
T Consensus 88 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~------------~~~------p--~~~~v~~G~~v~L~C~~~~~~~ 147 (268)
T 3mj6_A 88 LQDVQKADEGIYTCEIRLKNESMVMKKPVELWVL------------PEE------P--RDLRVRVGDTTQMRCSIQSTEE 147 (268)
T ss_dssp ECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEE------------CCC------C--SEEEEETTCCEEECCBCEESSS
T ss_pred ECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEe------------ccC------C--CccccccCCcEEEEEEecCCCC
Confidence 57899999999999999976522 2233344332 111 1 35678899999999999 67
Q ss_pred CCCCeEEEEeCCe
Q psy16421 77 SPPPSIMWRREGG 89 (151)
Q Consensus 77 ~~~~~~~W~~~~~ 89 (151)
.|.+.+.|++.++
T Consensus 148 ~p~~~v~W~~~~~ 160 (268)
T 3mj6_A 148 KRVTKVNWMFSSG 160 (268)
T ss_dssp SCCCEEEEEEECT
T ss_pred CCccceEEEecCC
Confidence 7899999998433
No 251
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.98 E-value=4e-10 Score=74.64 Aligned_cols=79 Identities=18% Similarity=0.417 Sum_probs=46.9
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC-CC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS-PP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-~~ 79 (151)
|.+++.+|+|.|.|.+.+..+......+.|.|... ...+|.+.... ....+.+|+.+.|.|.+.|. |.
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~---------~~~~P~v~~~~--~~~~~~~g~~v~L~C~~~g~~P~ 151 (227)
T 1mju_H 83 LSSLTSDDSAVYYCANKLGWFPYWGQGTLVTVSAA---------KTTAPSVYPLA--PVCGDTSGSSVTLGCLVKGYFPE 151 (227)
T ss_dssp ECSCCGGGCEEEEEEEEETTEEEECCCEEEEECSS---------CCBCCEEEEEC--CCC------CEEEEEEEEEEBSS
T ss_pred ECCCCcccCEEEEEEECCCCceEEcCcEEEEEcCC---------CCCCCEEEEec--CCccccCCCcEEEEEEeecEeCC
Confidence 67899999999999999864211223446666410 11234443322 11245679999999999874 66
Q ss_pred C-eEEEEeCCeee
Q psy16421 80 P-SIMWRREGGEM 91 (151)
Q Consensus 80 ~-~~~W~~~~~~~ 91 (151)
+ .+.|+++ ++.
T Consensus 152 p~~v~W~~~-g~~ 163 (227)
T 1mju_H 152 PVTLTWNSG-SLS 163 (227)
T ss_dssp CCEEEEGGG-TBC
T ss_pred CeEEEEecC-CCc
Confidence 6 9999994 443
No 252
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.97 E-value=1.9e-09 Score=71.94 Aligned_cols=85 Identities=19% Similarity=0.282 Sum_probs=50.5
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCC--
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSP-- 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~-- 78 (151)
|.+++.+|+|.|.|.+.|..+........|.|...............++.....+ ....+.+|+++.|.|.+.+.+
T Consensus 80 I~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~G~~v~L~C~~~~~~~~ 157 (247)
T 1svz_A 80 ISRVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQS--GPELKKPGETVKISCKATNYAFT 157 (247)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEC--CCEEECTTCCEEEEEEEESSCGG
T ss_pred ECCCCHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCC--CceeecCCCcEEEEEEEcCcccC
Confidence 5789999999999999987553233445666642100000000000022222222 235688999999999998864
Q ss_pred CCeEEEEeC
Q psy16421 79 PPSIMWRRE 87 (151)
Q Consensus 79 ~~~~~W~~~ 87 (151)
.+.+.|++.
T Consensus 158 ~~~v~W~k~ 166 (247)
T 1svz_A 158 DYSMHWVKQ 166 (247)
T ss_dssp GSCEEEEEE
T ss_pred CcEEEEEEe
Confidence 578999984
No 253
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.97 E-value=2.5e-10 Score=74.97 Aligned_cols=71 Identities=27% Similarity=0.430 Sum_probs=50.2
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeE-EEEeeec-CCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNV-SMRCAAS-GSP 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~-~l~C~~~-g~~ 78 (151)
|.+++.+|+|.|+|.+.+.........+.| .+..+|.+...+. ... .+|+.+ .|.|.+. +.|
T Consensus 82 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~L-------------~V~~~P~~~~~~~--~~~-~~g~~~~~l~C~~~~g~P 145 (221)
T 3eow_R 82 MFGLRVEDEGSYTCLFVTFPQGSRSVDIWL-------------RVLAKPQNTAEVQ--KVQ-LTGEPVPMARCVSTGGRP 145 (221)
T ss_dssp CCCSSCCCCSCBEEEEEESSSCSCEEECCC-------------CCCCCCEEEEEEE--CCC-CCSSSCCEEEEEEESCSS
T ss_pred EccCChHHCeEEEEEEEeCCCCceEEEEEE-------------EEEECCCceeecC--Ccc-cCCceEEEEEEECCCccC
Confidence 678999999999999999762234444443 3345777654331 112 567888 5999976 899
Q ss_pred CCeEEEEeC
Q psy16421 79 PPSIMWRRE 87 (151)
Q Consensus 79 ~~~~~W~~~ 87 (151)
.|.+.|+++
T Consensus 146 ~p~v~W~k~ 154 (221)
T 3eow_R 146 PAQITWHSD 154 (221)
T ss_dssp CCCEEEECS
T ss_pred CCeeEEEeC
Confidence 999999983
No 254
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=98.97 E-value=1.1e-09 Score=74.55 Aligned_cols=70 Identities=16% Similarity=0.246 Sum_probs=52.6
Q ss_pred cccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEE
Q psy16421 5 SREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMW 84 (151)
Q Consensus 5 ~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W 84 (151)
...|+|.|+|.|.|..+...+..+.|.|.. ..+|.+...+ ....+.+|+++.|.|.+.+.|.+.+.|
T Consensus 149 ~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~-----------~~~p~i~~~~--~~~~v~~G~~v~L~C~~~g~p~p~v~W 215 (289)
T 3mjg_X 149 GIFEDRSYICKTTIGDREVDSDAYYVYRLQ-----------VSSINVSVNA--VQTVVRQGENITLMCIVIGNEVVNFEW 215 (289)
T ss_dssp ECCCSSEEEEEEEETTEEEECCCEEEEECC-----------CCCCCCEEEE--SCSEEETTSCEEEEEEEESCSSBEEEE
T ss_pred eeccCcEEEEEEEeCCceeeeeeEEEEecC-----------CCCCCcEEeC--CcceeEcCCCEEEEEEECCCCCcceEE
Confidence 457999999999987764455555665531 1356665554 346788999999999999999999999
Q ss_pred EeC
Q psy16421 85 RRE 87 (151)
Q Consensus 85 ~~~ 87 (151)
+++
T Consensus 216 ~~~ 218 (289)
T 3mjg_X 216 TYP 218 (289)
T ss_dssp ECT
T ss_pred EcC
Confidence 973
No 255
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.97 E-value=3.4e-09 Score=71.30 Aligned_cols=83 Identities=20% Similarity=0.249 Sum_probs=52.7
Q ss_pred CccccccCCeEEEEEEEcCCCCC---CccceEEEEeccc-------cceeEEeecCCCCeeEeCCCCCceEeecCCeEEE
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPS---VSKRIMLIVQCQY-------FSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSM 70 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~---~~~~~~l~v~~~~-------~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l 70 (151)
|.+++.+|+|.|.|.+.|..+.. ......|.|.... ...........+|.+...+ ....+.+|+++.|
T Consensus 80 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p--~~~~v~~G~~v~L 157 (256)
T 3tf7_C 80 KASVHRSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSP--RNKVTVTGENVTL 157 (256)
T ss_dssp ESSCCGGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESC--SEEEEETTCCEEE
T ss_pred ECCCCcccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecC--CEEEEeCCCcEEE
Confidence 57899999999999999976421 2234456664200 0000000012355666655 5677889999999
Q ss_pred EeeecCCCCCeEEEEe
Q psy16421 71 RCAASGSPPPSIMWRR 86 (151)
Q Consensus 71 ~C~~~g~~~~~~~W~~ 86 (151)
.|.+.+. .+.+.|++
T Consensus 158 ~C~~~~~-~~~v~W~k 172 (256)
T 3tf7_C 158 SCRQTNS-HNYMYWYR 172 (256)
T ss_dssp CEEECSC-CSEEEEEE
T ss_pred EEEcCCC-ceEEEEEE
Confidence 9999886 78999998
No 256
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.97 E-value=9.5e-10 Score=72.59 Aligned_cols=80 Identities=19% Similarity=0.334 Sum_probs=51.9
Q ss_pred CccccccCCeEEEEEEEcCCCC-----CCccceEEEEeccccceeEEeecCCCCeeEe-CCCCCceEeecCCeEEEEeee
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP-----SVSKRIMLIVQCQYFSKLYIYTSSMPPDILD-YPTSSDIMVREGSNVSMRCAA 74 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~-----~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~g~~~~l~C~~ 74 (151)
|.+++.+|+|.|.|.+.+..+. .....+.|.|.. ....+|.+.. .+ ...+.+|+.+.|.|.+
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~---------~~~~~P~i~~~~~---~~~~~~g~~v~L~C~~ 150 (223)
T 1dee_B 83 MNSLRAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSS---------GSASAPTLFPLVS---CENSNPSSTVAVGCLA 150 (223)
T ss_dssp ECSCCGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECS---------SCCBCCEEEEEEC---TTCCCSSSEEEEEEEE
T ss_pred ECCCCHHHCEEEEEEEeccccCcccceeecCcEEEEEcc---------CCCCCCEEEEecC---CcccCCCCcEEEEEEE
Confidence 6789999999999999987531 111334565531 0113454442 22 1234679999999999
Q ss_pred cCC-CCC-eEEEEeCCeeeE
Q psy16421 75 SGS-PPP-SIMWRREGGEMI 92 (151)
Q Consensus 75 ~g~-~~~-~~~W~~~~~~~~ 92 (151)
.+. |.+ .+.|++.+++.+
T Consensus 151 ~g~~P~p~~v~W~~~~g~~l 170 (223)
T 1dee_B 151 QDFLPDSITFSWKYKNNSDI 170 (223)
T ss_dssp EEEBSSCCEEEEEETTSCBC
T ss_pred EEEeCCCeEEEeEccCCCcc
Confidence 885 766 999999445544
No 257
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=98.97 E-value=1.1e-09 Score=71.49 Aligned_cols=81 Identities=10% Similarity=0.189 Sum_probs=51.9
Q ss_pred eecCCeEEEEeeecCCC----CCeEEEEeCCeeeEecc---------cC-------------------------------
Q psy16421 62 VREGSNVSMRCAASGSP----PPSIMWRREGGEMITNS---------FN------------------------------- 97 (151)
Q Consensus 62 ~~~g~~~~l~C~~~g~~----~~~~~W~~~~~~~~~~~---------~~------------------------------- 97 (151)
+.+|+++.|.|.+.|.+ ...+.|++++ ..+... ..
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~-~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~ 93 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDD-VEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFP 93 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETT-EEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECC-ccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCC
Confidence 67899999999998864 3489999955 333210 00
Q ss_pred ------------CCCCCeeeeCCceeEeecCCcEEEEeeeccc-CCC-eeEEEcCCceec
Q psy16421 98 ------------NTVPPIVKIPSQLIGAHEGQQLVLECISEAY-PKS-VNYWTREKGDMI 143 (151)
Q Consensus 98 ------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~-~~~W~k~~~~~~ 143 (151)
+..+|.+...+.......|+.+.|.|.+.|. |++ .++|+|||..+.
T Consensus 94 ~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 153 (207)
T 2vol_A 94 APIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAE 153 (207)
T ss_dssp SCEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred CceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEecc
Confidence 0123333322221112358999999999984 553 799999987653
No 258
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=98.97 E-value=1.9e-09 Score=73.92 Aligned_cols=86 Identities=13% Similarity=0.143 Sum_probs=62.0
Q ss_pred ceEeecCCeEEEEeee-cCCCCCeEEEEeCCeeeEecccC------------------------------C---------
Q psy16421 59 DIMVREGSNVSMRCAA-SGSPPPSIMWRREGGEMITNSFN------------------------------N--------- 98 (151)
Q Consensus 59 ~~~~~~g~~~~l~C~~-~g~~~~~~~W~~~~~~~~~~~~~------------------------------~--------- 98 (151)
.+.+.+|+.+.|.|.+ .+.|.+.+.|++ +++.+....+ +
T Consensus 10 ~~~v~eg~~v~l~~~~~~~~p~~~v~W~k-~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s~~ 88 (312)
T 2y23_A 10 VVNVDDDGVISLNFECDKMTPKSEFSWSK-DYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSYL 88 (312)
T ss_dssp EEEECTTCCEEEEEECSSCCTTCCEEEEE-TTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCEEEE
T ss_pred eEEEecCCeEEEEEEEeCCCCCcEEEEEE-CCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEEEEE
Confidence 4567789999988886 467899999999 5555432211 0
Q ss_pred ---CC------------CCeeeeCC-ceeEeecCCcEEEEeeec-ccCCCeeEEEcCCceeccC
Q psy16421 99 ---TV------------PPIVKIPS-QLIGAHEGQQLVLECISE-AYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 99 ---~~------------~p~~~~~~-~~~~~~~g~~~~l~C~~~-g~p~~~~~W~k~~~~~~~~ 145 (151)
.. +|.+.... ....+.+|+.+.|.|.+. +.|.+.+.|+|++..+..+
T Consensus 89 l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~ 152 (312)
T 2y23_A 89 IDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEG 152 (312)
T ss_dssp ECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSS
T ss_pred EEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeC
Confidence 00 34333322 367789999999999999 8999999999998776543
No 259
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.96 E-value=8.6e-10 Score=72.36 Aligned_cols=79 Identities=19% Similarity=0.399 Sum_probs=51.8
Q ss_pred CccccccCCeEEEEEEEcCCCC--CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC-
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP--SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS- 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~- 77 (151)
|.+++.+|+|.|.|.+.+..+. .....+.|.|.. ....+|.+...+ ....+.+|+.+.|.|.+.|.
T Consensus 82 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~---------~~~~~P~i~~~~--~~~~~~~g~~v~L~C~~~g~~ 150 (215)
T 1c5d_H 82 MNSLQTEDTAIYFCTREDGWNYFDYWGPGTMVTVSS---------AQTTAPSVYPLA--PGCGDTTSSTVTLGCLVKGYF 150 (215)
T ss_dssp ESSCCGGGCEEEEEEECCSSSCSCCBCCCEEEEECS---------SCCBCCCEEEEC--CCSSCCCCSSEEEEEEEEEEB
T ss_pred ECCCCcccCEEEEEEEecCCcccceEcCCEEEEecC---------CCCCCCeEEecc--CChhhccCCcEEEEEEEeeeE
Confidence 5789999999999999987531 122345666641 111245444322 11234679999999999885
Q ss_pred CCC-eEEEEeCCeee
Q psy16421 78 PPP-SIMWRREGGEM 91 (151)
Q Consensus 78 ~~~-~~~W~~~~~~~ 91 (151)
|.+ .+.|+++ ++.
T Consensus 151 P~p~~v~W~~~-g~~ 164 (215)
T 1c5d_H 151 PEPVTVTWNSG-ALS 164 (215)
T ss_dssp SSCCEEEEGGG-TTC
T ss_pred cCCcEEEEccC-Ccc
Confidence 777 9999994 443
No 260
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.96 E-value=9.2e-10 Score=73.42 Aligned_cols=85 Identities=20% Similarity=0.374 Sum_probs=53.1
Q ss_pred CccccccCCeEEEEEEEcCCC-----CCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeec
Q psy16421 1 MTEVSREHMGAYLCIASNGVP-----PSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAAS 75 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~-----~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~ 75 (151)
|.+++.+|+|.|.|.+.+..+ ........|.|... +....+|.+..... ....+.+|+.+.|.|.+.
T Consensus 78 I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~-------~~~~~~P~v~~~~~-~~~~~~~g~~~~l~C~~~ 149 (245)
T 3nfj_J 78 SKKLLLSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVED-------LNKVFPPEVAVFEP-SEAEISHTQKATLVCLAT 149 (245)
T ss_dssp ESSCCGGGCEEEEEEEECCTTTSSCCCEECCCEEEEEESC-------GGGCBCCEEEEEEC-CHHHHHHHSEEEEEEEEE
T ss_pred ECCCChhhCEEEEEEEeeccCCCceeEEECCCeEEEEEcc-------cCCCCCCceEeecC-CcccccCCCceEEEEEEc
Confidence 578999999999999999322 12233445665410 01123555543221 223345689999999998
Q ss_pred CC-CCC-eEEEEeCCeeeEec
Q psy16421 76 GS-PPP-SIMWRREGGEMITN 94 (151)
Q Consensus 76 g~-~~~-~~~W~~~~~~~~~~ 94 (151)
|. |.+ .+.|++ +++.+..
T Consensus 150 g~~p~~~~v~W~k-~g~~l~~ 169 (245)
T 3nfj_J 150 GFFPDHVELSWWV-NGKEVHS 169 (245)
T ss_dssp EEBSSCEEEEEEE-TTEEECT
T ss_pred cCcCCCEEEEEEE-CCEECCC
Confidence 84 444 689999 6776653
No 261
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.96 E-value=9.9e-10 Score=73.05 Aligned_cols=84 Identities=19% Similarity=0.348 Sum_probs=53.8
Q ss_pred CccccccCCeEEEEEEEcC--CCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-C
Q psy16421 1 MTEVSREHMGAYLCIASNG--VPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-S 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~--~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~ 77 (151)
|.+++.+|+|.|.|.+.+. ..........|.|... +....+|.+..... ....+.+|+.+.|.|.+.+ .
T Consensus 79 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~-------~~~~~~p~~~~~~~-~~~~~~~g~~v~L~C~~~g~~ 150 (240)
T 3q5y_A 79 MSALELEDSAMYFCASSLRWGDEQYFGPGTRLTVLED-------LRNVTPPKVSLFEP-SKAEIANKQKATLVCLARGFF 150 (240)
T ss_dssp ECSCCGGGCEEEEEEEESSTTBCCEECCCEEEEEESC-------GGGCBCCEEEEECC-CHHHHHHHSEEEEEEEEEEEB
T ss_pred ECcCChhHCEEEEEEEccCCCcceEEcCCEEEEEecc-------ccCCCCCeeEEeCC-chhhcccCCceEEEEEEeeEE
Confidence 5789999999999999843 2212334455665410 01124555543221 3344557899999999988 5
Q ss_pred CCC-eEEEEeCCeeeEe
Q psy16421 78 PPP-SIMWRREGGEMIT 93 (151)
Q Consensus 78 ~~~-~~~W~~~~~~~~~ 93 (151)
|.+ .+.|++ +++.+.
T Consensus 151 P~~~~v~W~~-~g~~l~ 166 (240)
T 3q5y_A 151 PDHVELSWWV-NGKEVH 166 (240)
T ss_dssp SSCEEEEEEE-TTEEEC
T ss_pred CCCeEEEEEE-CCEECc
Confidence 656 789999 677664
No 262
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.96 E-value=8.4e-10 Score=72.91 Aligned_cols=78 Identities=19% Similarity=0.443 Sum_probs=51.1
Q ss_pred CccccccCCeEEEEEEEcCCC-----C--CCccceEEEEeccccceeEEeecCCCCeeEe-CCCCCceEeecCCeEEEEe
Q psy16421 1 MTEVSREHMGAYLCIASNGVP-----P--SVSKRIMLIVQCQYFSKLYIYTSSMPPDILD-YPTSSDIMVREGSNVSMRC 72 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~-----~--~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~g~~~~l~C 72 (151)
|.+++.+|+|.|.|.+.+..+ . .....+.|.|... ...+|.+.. .+. . .+.+|+.+.|.|
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~---------~~~~P~v~~~~~~--~-~~~~g~~v~L~C 150 (225)
T 1op3_H 83 MHKMRVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPA---------STKGPSVFPLAPS--S-KSTSGGTAALGC 150 (225)
T ss_dssp ECSCCGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESC---------SCBCCEEEEECCC--T-TCCCCCEEEEEE
T ss_pred ECCCChhhCEEEEEEEecCCCccccccceeecCCEEEecccC---------CCcCCeEEEeccc--c-cccCCCcEEEEE
Confidence 578999999999999999754 1 1123456666410 112344433 321 1 245799999999
Q ss_pred eecCC-CCC-eEEEEeCCeee
Q psy16421 73 AASGS-PPP-SIMWRREGGEM 91 (151)
Q Consensus 73 ~~~g~-~~~-~~~W~~~~~~~ 91 (151)
.+.|. |.+ .+.|++ ++..
T Consensus 151 ~~~g~~P~p~~v~W~~-~~~~ 170 (225)
T 1op3_H 151 LVKDYFPEPVTVSWNS-GALT 170 (225)
T ss_dssp EEEEEBSSCCEEECCT-TSCC
T ss_pred EEEeEECCCeEEEEec-CCCc
Confidence 99875 666 999999 4543
No 263
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.95 E-value=3.4e-09 Score=78.96 Aligned_cols=79 Identities=20% Similarity=0.341 Sum_probs=55.2
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCC-eEEEEeeecC-CC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGS-NVSMRCAASG-SP 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~-~~~l~C~~~g-~~ 78 (151)
|.+++.+|+|.|+|.+.|..+......+.|.|.. ...+|.+.... ..+.+++ .+.|.|.+.+ .|
T Consensus 436 i~~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~----------~~~~p~i~~~~----~~~~~~~~~~~l~C~~~~~~P 501 (581)
T 3o3u_N 436 LPAVGIQDEGIFRCQAMNRNGKETKSNYRVRVYQ----------IPGKPEIVDSA----SELTAGVPNKVGTCVSEGSYP 501 (581)
T ss_dssp ESSCCGGGCEEEEEEEECTTSCEEEEEEEEEEEB----------CCCCCEEESCC----SEECTTSCEEEEEEEEEEEBS
T ss_pred EeccccccCeEEEEEEEcCCCceeEEEEEEEEEc----------CCCCCEEEcCC----cccccCCceeEEEEECCCCCC
Confidence 5789999999999999998884435667777742 12344444322 2344544 4567999887 69
Q ss_pred CCeEEEEeCCeeeEec
Q psy16421 79 PPSIMWRREGGEMITN 94 (151)
Q Consensus 79 ~~~~~W~~~~~~~~~~ 94 (151)
.|.+.|++ +++.+..
T Consensus 502 ~~~i~W~~-~g~~l~~ 516 (581)
T 3o3u_N 502 AGTLSWHL-DGKPLVP 516 (581)
T ss_dssp CCEEEEEE-TTEECCT
T ss_pred CCeEEEEE-CCEECCC
Confidence 99999999 6776653
No 264
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.95 E-value=1.1e-09 Score=72.87 Aligned_cols=84 Identities=17% Similarity=0.353 Sum_probs=54.2
Q ss_pred CccccccCCeEEEEEEEcCCC----CCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC
Q psy16421 1 MTEVSREHMGAYLCIASNGVP----PSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~----~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g 76 (151)
|.+++.+|+|.|.|.+.+..+ ........|.|... +....+|.+..... ....+.+|+.+.|.|.+.|
T Consensus 76 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~-------~~~~~~P~v~~~~~-~~~~~~~g~~~~L~C~~~g 147 (238)
T 1bec_A 76 LELATPSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLED-------LRQVTPPKVSLFEP-SKAEIANKQKATLVCLARG 147 (238)
T ss_dssp ESSCCGGGCEEEEEEEESCTTCGGGCEECCCEEEEEESC-------GGGCBCCEEEEECC-CSTTCSSSCSCSEEEEEEE
T ss_pred EecCCcccCEEEEEEEecCCCCccccccCCCEEEEEecc-------CCCCCCCceEEECC-ChHHcccCCceEEEEEEee
Confidence 578999999999999998742 01123345666421 00113565544221 2334567999999999988
Q ss_pred C-CCC-eEEEEeCCeeeEe
Q psy16421 77 S-PPP-SIMWRREGGEMIT 93 (151)
Q Consensus 77 ~-~~~-~~~W~~~~~~~~~ 93 (151)
. |.+ .+.|++ +++.+.
T Consensus 148 ~~P~~~~v~W~~-~g~~~~ 165 (238)
T 1bec_A 148 FFPDHVELSWWV-NGKEVH 165 (238)
T ss_dssp EBSCCEEEEEEE-TTEEEC
T ss_pred EeCCCcEEEEEE-CCEECC
Confidence 5 654 899999 666654
No 265
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=98.94 E-value=1.4e-09 Score=74.06 Aligned_cols=111 Identities=15% Similarity=0.182 Sum_probs=71.5
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC-
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP- 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~- 79 (151)
|.+++.+|+|.|+|.+.|..+...+..+.|.|.. ....+|.+...+ ....+.+|+.+.|.|.+.+.+.
T Consensus 148 i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~---------~~~~~p~i~~~~--~~~~~~~g~~v~l~C~~~~~~~~ 216 (292)
T 4dkd_C 148 IHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQK---------VIPGPPALTLVP--AELVRIRGEAAQIVCSASSVDVN 216 (292)
T ss_dssp ETTCCGGGCSEEEEEECSTTSCEECCCEEEEEEC---------CCCSSCEEEEES--SCBCCCSSSCEEEEEEEEESSSC
T ss_pred ECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeC---------CCCCCCeEEccC--CceeEecCCCEEEEEEecCCCCc
Confidence 4678999999999999988775555577777751 112377777666 4556678999999999988664
Q ss_pred CeEEEEeCCeeeEecccC--CCCC-----CeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGEMITNSFN--NTVP-----PIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~--~~~~-----p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
+.+.|++ ++..+..... .... -.+.+. .+...+.....|.+..
T Consensus 217 ~~~~w~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~----~v~~~d~G~Y~C~a~N 266 (292)
T 4dkd_C 217 FDVFLQH-NNTKLAIPQQSDFHNNRYQKVLTLNLD----QVDFQHAGNYSCVASN 266 (292)
T ss_dssp CEEECCB-SSCCCCCCBEEEEETTEEEEEEEEEES----SCCTTSCEEEEEEEEC
T ss_pred eEEEEeC-CCcccccCccceeccceeeeEEEEEEC----ccChhcCeEEEEEEec
Confidence 5677777 4543321110 0000 011111 2456788899999864
No 266
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.93 E-value=7.1e-10 Score=73.05 Aligned_cols=79 Identities=19% Similarity=0.313 Sum_probs=52.2
Q ss_pred CccccccCCeEEEEEEEcCCCCC--CccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC-
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPS--VSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS- 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~--~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~- 77 (151)
|.+++.+|+|.|.|.+.+..+.. ....+.|.|... ...+|.+...+ ...+.+|+.+.|.|.+.+.
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~---------~~~~P~v~~~~---~~~~~~g~~v~L~C~~~g~~ 150 (220)
T 2fbj_H 83 MSKVRSEDTALYYCARLHYYGYNAYWGQGTLVTVSAE---------SARNPTIYPLT---LPPALSSDPVIIGCLIHDYF 150 (220)
T ss_dssp ECSCCGGGCEEEEEEEEETTTEEEEECCCEEEEECSS---------CCBCCEEEEEC---CCSSSCCSSEEEEEEEEEEB
T ss_pred ECCCChhhCEEEEEEEeccccccceecCCEEEEecCC---------CCCCCEEEEee---cccccCCCcEEEEEEEEeEE
Confidence 57899999999999999875421 223456666411 11345554432 1234679999999999875
Q ss_pred CC--CeEEEEeCCeeeE
Q psy16421 78 PP--PSIMWRREGGEMI 92 (151)
Q Consensus 78 ~~--~~~~W~~~~~~~~ 92 (151)
|. +.+.|++ ++..+
T Consensus 151 P~~~~~v~W~~-~~~~~ 166 (220)
T 2fbj_H 151 PSGTMNVTWGK-SGKDI 166 (220)
T ss_dssp SCCCEEEEESC-CCSSC
T ss_pred CCCcEEEEEec-CCEec
Confidence 65 6899999 45443
No 267
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.93 E-value=2.3e-09 Score=69.94 Aligned_cols=29 Identities=17% Similarity=0.433 Sum_probs=23.0
Q ss_pred cCCcEEEEeeeccc-CCC-eeEEEcCCceec
Q psy16421 115 EGQQLVLECISEAY-PKS-VNYWTREKGDMI 143 (151)
Q Consensus 115 ~g~~~~l~C~~~g~-p~~-~~~W~k~~~~~~ 143 (151)
.|..+.|.|.+.|. |++ .++|+|||..+.
T Consensus 123 ~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~ 153 (207)
T 1l6x_A 123 TKNQVSLTCLVKGFYPSDIAVEWESNGQPEN 153 (207)
T ss_dssp GSSEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred cCCcEEEEEEEeCeECCCeEEEEEECCeecc
Confidence 46679999999995 543 799999987654
No 268
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.93 E-value=1e-09 Score=72.59 Aligned_cols=76 Identities=20% Similarity=0.384 Sum_probs=48.1
Q ss_pred CccccccCCeEEEEEEEcCCCC--------CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEe
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP--------SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRC 72 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~--------~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C 72 (151)
|.+++.+|+|.|.|.+.+..+. .....+.|.|.. ....+|.+...+ ....+.+|+.+.|.|
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~---------~~~~~P~i~~~~--~~~~~~~g~~~~l~C 152 (228)
T 3bae_H 84 ITSVDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSS---------AKTTAPSVYPLA--PVCGDTTGSSVTLGC 152 (228)
T ss_dssp ECSCCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECS---------CCCBCCEEEEEC--C-----CCSEEEEEE
T ss_pred EcCCCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecC---------CCCCCCEEEEec--ccccccCCCCEEEEE
Confidence 5789999999999999987541 111235555531 011345544322 122356799999999
Q ss_pred eecCC-CCC-eEEEEeC
Q psy16421 73 AASGS-PPP-SIMWRRE 87 (151)
Q Consensus 73 ~~~g~-~~~-~~~W~~~ 87 (151)
.+.+. |.+ .+.|+++
T Consensus 153 ~~~g~~P~p~~v~W~~~ 169 (228)
T 3bae_H 153 LVKGYFPEPVTLTWNSG 169 (228)
T ss_dssp EEEEEBSSCCEEEEGGG
T ss_pred EEccEeCCCEEEEEeeC
Confidence 99875 767 9999984
No 269
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=98.93 E-value=3.2e-09 Score=70.67 Aligned_cols=35 Identities=11% Similarity=0.337 Sum_probs=29.4
Q ss_pred CceeEeecCCcEEEEeeecccCCCeeEEEcCCcee
Q psy16421 108 SQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDM 142 (151)
Q Consensus 108 ~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~ 142 (151)
+....+.+|+++.|.|.+.|.|.|.+.|+|++..+
T Consensus 143 ~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~ 177 (250)
T 2fbo_J 143 AEVVQVDEGNDITMTCPCTDCANANVTWYTGPTFF 177 (250)
T ss_dssp CSEEECCTTCCEEECCCEESCTTCEEEEEEEEECS
T ss_pred CceEEecCCCcEEEEEEecCCCCCeeEEEeCCCcc
Confidence 34456678999999999999999999999986644
No 270
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=98.92 E-value=1.8e-08 Score=65.25 Aligned_cols=82 Identities=13% Similarity=0.220 Sum_probs=56.7
Q ss_pred ceEeecCCeEEEEeeecCCCCCeEEEEeCCe----e-e---------------------------EecccC---------
Q psy16421 59 DIMVREGSNVSMRCAASGSPPPSIMWRREGG----E-M---------------------------ITNSFN--------- 97 (151)
Q Consensus 59 ~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~----~-~---------------------------~~~~~~--------- 97 (151)
...+.+|+.+.|.|.+.+.+.+.+.|++.+. . . +....-
T Consensus 8 ~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~L~i~~v~~~D~G~Y~ 87 (208)
T 3r4d_A 8 PPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIYSNGSLLFQMITMKDMGVYT 87 (208)
T ss_dssp SSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEECTTSCEEECSCCGGGCEEEE
T ss_pred cceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEecCCeEEEccccccCCeEEE
Confidence 3567889999999998888889999998421 0 0 000000
Q ss_pred ------------------C---CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceec
Q psy16421 98 ------------------N---TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMI 143 (151)
Q Consensus 98 ------------------~---~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~ 143 (151)
+ ...|.+...... +.+|+.+.|.|.+.+.| |.+.|+++|..+.
T Consensus 88 C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~ 151 (208)
T 3r4d_A 88 LDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQ 151 (208)
T ss_dssp EEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECC
T ss_pred EEEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCC
Confidence 1 112344443333 78899999999999976 7999999877664
No 271
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=98.91 E-value=1.7e-09 Score=73.29 Aligned_cols=85 Identities=18% Similarity=0.388 Sum_probs=53.9
Q ss_pred CccccccCCeEEEEEEEcCCCC---CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP---SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG- 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~---~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g- 76 (151)
|.+++.+|+|.|.|.+.+.... .......|.|... +....+|.+..... ....+..|+.+.|.|.+.+
T Consensus 105 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~-------~~~~~~P~v~~~~~-~~~~~~~g~~v~L~C~~~g~ 176 (270)
T 3qib_D 105 IQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLED-------LKNVFPPEVAVFEP-SEAEISHTQKATLVCLATGF 176 (270)
T ss_dssp ESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESC-------STTCBCCEEEEEEC-CHHHHHHHSEEEEEEEEEEE
T ss_pred ECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccc-------cccccCCceEEECC-CccccccCCceEEEEEecce
Confidence 6789999999999999874321 2223445655411 11122455433211 2334456999999999988
Q ss_pred CCCC-eEEEEeCCeeeEec
Q psy16421 77 SPPP-SIMWRREGGEMITN 94 (151)
Q Consensus 77 ~~~~-~~~W~~~~~~~~~~ 94 (151)
.|.+ .+.|++ +++.+..
T Consensus 177 ~P~~~~v~W~k-~g~~l~~ 194 (270)
T 3qib_D 177 YPDHVELSWWV-NGKEVHS 194 (270)
T ss_dssp BSSCEEEEEEE-TTEEECT
T ss_pred eCCCeEEEEEE-CCEECCC
Confidence 6666 799999 6777653
No 272
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.91 E-value=4.7e-09 Score=68.46 Aligned_cols=29 Identities=24% Similarity=0.572 Sum_probs=25.3
Q ss_pred ecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 114 HEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 114 ~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
.+|+++.|.|. |.|.|.+.|+|+|..+..
T Consensus 126 ~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~ 154 (204)
T 1sy6_A 126 ISGTTVILTCP--QYPGSEILWQHNDKNIGG 154 (204)
T ss_dssp EETTEEEEECS--CCCSSCEEEEETTEEESC
T ss_pred ecCCcEEEEcC--CCCCCceEEEECCEECCC
Confidence 38999999999 889999999999877644
No 273
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.91 E-value=4.7e-09 Score=68.35 Aligned_cols=112 Identities=19% Similarity=0.269 Sum_probs=62.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEee-ecCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCA-ASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~-~~g~~~ 79 (151)
|.+++.+|+|.|.|.+.|..+........+.+. .+|.....+ .......++...+.|. +.+.|+
T Consensus 87 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~--~~~~~~~~~~~~~~c~~~~~~P~ 151 (225)
T 4fmk_A 87 FRGLRVEDEGNYTCEFATFPNGTRRGVTWLRVI-------------AQPENHAEA--QEVTIGPQSVAVARCVSTGGRPP 151 (225)
T ss_dssp ECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEE-------------BCCEEEEEE--CCBCCSSSCEEEEEEEEEEEBSC
T ss_pred EccCCHHHCcceEEEEEeCCCcceeeeeeeeee-------------cCCceeecc--cceeecceeeeeeeeeecCCCCC
Confidence 578999999999999999876433333333332 334433332 2334455677777766 566888
Q ss_pred CeEEEEeCCeeeEecccC-CCCCCeeeeC--CceeEeecCCcEEEEeeecc
Q psy16421 80 PSIMWRREGGEMITNSFN-NTVPPIVKIP--SQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~~~~-~~~~p~~~~~--~~~~~~~~g~~~~l~C~~~g 127 (151)
+.+.|+++++........ ....-.+... .....+...+...++|.|..
T Consensus 152 ~~~~w~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N 202 (225)
T 4fmk_A 152 ARITWISSLGGEAKDTQEPGIQAGTVTIISRYSLVPVGRADGVKVTCRVEH 202 (225)
T ss_dssp CEEEEECSSCCEEEEEEEECSSTTCEEEEEEEEECCCGGGTTCEEEEEEEC
T ss_pred CEEEEEECCccccCCcceEEecCCCEEEEEEEEEeeCCHHHCCEEEEEEEc
Confidence 999999854433322111 0101111100 00111345666789999874
No 274
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.91 E-value=3.2e-08 Score=66.28 Aligned_cols=90 Identities=16% Similarity=0.167 Sum_probs=61.2
Q ss_pred CCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecc-------cC---------------------
Q psy16421 46 SMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNS-------FN--------------------- 97 (151)
Q Consensus 46 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~-------~~--------------------- 97 (151)
..+|.+...+ .. .+.+|++++|.|.+.+ +.+.+.|+| +++.+... ..
T Consensus 5 ~~kP~i~~~P--~~-~v~~G~~VtL~C~~~~-~~~~~~w~k-~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~ 79 (242)
T 1p6f_A 5 LPKPFIWAEP--HF-MVPKEKQVTICCQGNY-GAVEYQLHF-EGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIY 79 (242)
T ss_dssp CCCCEEEEES--CS-EEETTCCEEEEEECCT-TCCEEEEEE-TTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCCEEEeeC--CC-ccCCCCcEEEEEeeCC-CCcEEEEEE-CCCccccccccccCCcceeEEEecCCCcccCeEEEEEE
Confidence 3567777766 33 7889999999999876 467899999 45443210 00
Q ss_pred ----------------C---CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCcee
Q psy16421 98 ----------------N---TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDM 142 (151)
Q Consensus 98 ----------------~---~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~ 142 (151)
+ ..+|.+...+ ...+.+|+++.|.|.+.+. .+.+.|+|+|..+
T Consensus 80 ~~~~~~s~~S~~~~L~V~~~~~~P~i~~~p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~ 141 (242)
T 1p6f_A 80 RVGELWSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSS 141 (242)
T ss_dssp EETTEECCCCCCEEEEEECCSCCCEEEEES-CSEEETTCEEEEEEECTTS-CSEEEEEECSSSC
T ss_pred ecCCccccCCcceEEEeecccCCCceEccC-CCccCCCCcEEEEEecCCC-CCEEEEEECCCcc
Confidence 0 0133343333 2357899999999999875 4689999997644
No 275
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=98.90 E-value=7.8e-09 Score=67.71 Aligned_cols=29 Identities=17% Similarity=0.497 Sum_probs=25.8
Q ss_pred eecCCcEEEEeeecc-cCCC-eeEEEcCCce
Q psy16421 113 AHEGQQLVLECISEA-YPKS-VNYWTREKGD 141 (151)
Q Consensus 113 ~~~g~~~~l~C~~~g-~p~~-~~~W~k~~~~ 141 (151)
+.+|+.+.|.|.+.| +|.| .++|+|+|..
T Consensus 136 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~ 166 (219)
T 1c1e_H 136 AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 166 (219)
T ss_dssp SCCSSEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred cccCCeEEEEEEcccccCCCeEEEEEeCCcc
Confidence 467999999999998 8999 8999998764
No 276
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.90 E-value=2e-09 Score=70.12 Aligned_cols=87 Identities=17% Similarity=0.310 Sum_probs=57.3
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEeCC-eeeEe--------------------cccC-------------------
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRREG-GEMIT--------------------NSFN------------------- 97 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~-~~~~~--------------------~~~~------------------- 97 (151)
..+.+.+|+++.|.|.+.+.+.+.+.|++.+ +..+. ....
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 86 (212)
T 1nfd_E 7 SSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYYC 86 (212)
T ss_dssp SEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEEE
T ss_pred CeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEEE
Confidence 4567889999999999988887889999842 22110 0000
Q ss_pred --C---------------------CCCCeeeeCCceeEeecCCcEEEEeeeccc-CC-CeeEEEcCCceecc
Q psy16421 98 --N---------------------TVPPIVKIPSQLIGAHEGQQLVLECISEAY-PK-SVNYWTREKGDMIA 144 (151)
Q Consensus 98 --~---------------------~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p~-~~~~W~k~~~~~~~ 144 (151)
. ..+|.+........+.+|+.+.|.|.+.|. |+ +.++|+|+|..+..
T Consensus 87 ~~~n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~ 158 (212)
T 1nfd_E 87 LSSYGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATIND 158 (212)
T ss_dssp EEEETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECS
T ss_pred EEEcccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCC
Confidence 0 122333322222223569999999999987 55 78999999877654
No 277
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.90 E-value=2.4e-09 Score=71.32 Aligned_cols=85 Identities=18% Similarity=0.360 Sum_probs=53.6
Q ss_pred CccccccCCeEEEEEEEcCC---CCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-
Q psy16421 1 MTEVSREHMGAYLCIASNGV---PPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG- 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~---~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g- 76 (151)
|.+++.+|+|.|.|.+.+.. .........|.|... +....+|.+..... ....+.+|+.+.|.|.+.|
T Consensus 80 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~-------~~~~~~p~~~~~~~-~~~~~~~g~~v~l~C~~~g~ 151 (245)
T 4ei6_B 80 IQPTALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLED-------LKNVFPPEVAVFEP-SEAEISHTQKATLVCLATGF 151 (245)
T ss_dssp ECSCCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESC-------GGGCBCCEEEEECC-CHHHHHHHSEEEEEEEEEEE
T ss_pred ECCCCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecc-------cCCCCCceEEEeCC-CcccccCCCceEEEEEEeeE
Confidence 57899999999999998642 112334455665410 00113454433221 3344556999999999988
Q ss_pred CCCC-eEEEEeCCeeeEec
Q psy16421 77 SPPP-SIMWRREGGEMITN 94 (151)
Q Consensus 77 ~~~~-~~~W~~~~~~~~~~ 94 (151)
.|.+ .+.|++ +++.+..
T Consensus 152 ~p~~~~v~W~~-~g~~l~~ 169 (245)
T 4ei6_B 152 YPDHVELSWWV-NGKEVHS 169 (245)
T ss_dssp BSSCEEEEEEE-TTEEECT
T ss_pred eCCCeEEEEEE-CCEECCC
Confidence 4444 899999 6777653
No 278
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.90 E-value=2.7e-09 Score=71.39 Aligned_cols=82 Identities=17% Similarity=0.267 Sum_probs=52.0
Q ss_pred eecCCeEEEEeeecCC---CCC-eEEEEeCCeeeEec--------ccC--------------------------C-----
Q psy16421 62 VREGSNVSMRCAASGS---PPP-SIMWRREGGEMITN--------SFN--------------------------N----- 98 (151)
Q Consensus 62 ~~~g~~~~l~C~~~g~---~~~-~~~W~~~~~~~~~~--------~~~--------------------------~----- 98 (151)
+.+|+++.|.|.+.+. |.+ .+.|+++++..... ... .
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 6789999999999876 655 89999955332110 000 0
Q ss_pred ------------CCCCeeeeCCceeEeecCCcEEEEeeecc-cCC-CeeEEEcCCceec
Q psy16421 99 ------------TVPPIVKIPSQLIGAHEGQQLVLECISEA-YPK-SVNYWTREKGDMI 143 (151)
Q Consensus 99 ------------~~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~-~~~~W~k~~~~~~ 143 (151)
..+|.+.+.+.......|+.+.|.|.+.| +|+ ..++|+|||..+.
T Consensus 109 ~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 167 (239)
T 1i1c_A 109 PIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQE 167 (239)
T ss_dssp CEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred CcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECC
Confidence 11233332222111235789999999998 555 3699999987653
No 279
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.90 E-value=7e-09 Score=70.19 Aligned_cols=85 Identities=19% Similarity=0.236 Sum_probs=50.5
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEecccc-----ceeEEeecCCCCee-EeCCCCCceEeecCCeEEEEeee
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYF-----SKLYIYTSSMPPDI-LDYPTSSDIMVREGSNVSMRCAA 74 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~-----~~~~~~~~~~~p~~-~~~~~~~~~~~~~g~~~~l~C~~ 74 (151)
|.+++.+|+|.|.|.+.+..+........|.|..... ..........+|.+ ...+ ....+.+|+++.|.|.+
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~G~~v~L~C~~ 162 (264)
T 2gjj_A 85 IGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQS--GPEVVKTGASVKISCKA 162 (264)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEEC--CCEEECTTCCEEEEEEE
T ss_pred ECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCC--CCEEEcCCCcEEEEEEE
Confidence 5789999999999999987542233445666642100 00000000001222 2222 23468899999999999
Q ss_pred cCCCC--CeEEEEeC
Q psy16421 75 SGSPP--PSIMWRRE 87 (151)
Q Consensus 75 ~g~~~--~~~~W~~~ 87 (151)
.+.+. +.+.|++.
T Consensus 163 ~~~~~~~~~v~W~r~ 177 (264)
T 2gjj_A 163 SGYSFTGYFINWVKK 177 (264)
T ss_dssp ESSCGGGSEEEEEEE
T ss_pred eCCccCCeEEEEEEE
Confidence 88763 78999984
No 280
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.90 E-value=1.9e-09 Score=70.88 Aligned_cols=78 Identities=19% Similarity=0.430 Sum_probs=51.9
Q ss_pred CccccccCCeEEEEEEEcCCC-CCCccceEEEEeccccceeEEeecCCCCeeE-eCCCCCceEeecCCeEEEEeeecC-C
Q psy16421 1 MTEVSREHMGAYLCIASNGVP-PSVSKRIMLIVQCQYFSKLYIYTSSMPPDIL-DYPTSSDIMVREGSNVSMRCAASG-S 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~-~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~g~~~~l~C~~~g-~ 77 (151)
|.+++.+|+|.|.|.+.+... ........|.|.. ....+|.+. ..+ ... .+|+.+.|.|.+.+ .
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~---------~~~~~p~v~~~~~--~~~--~~g~~v~L~C~~~~~~ 151 (221)
T 3m8o_H 85 MNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSS---------ASPTSPKVFPLSL--CST--QPDGNVVIACLVQGFF 151 (221)
T ss_dssp ECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECS---------CCCBCCEEEEEEC--CSC--CCTTEEEEEEEEEEEB
T ss_pred ECCCCHHHCEEEEEEEECCChhheECCCEEEEEec---------CCCCCCeEEEecC--ccc--ccCCCEEEEEEEEeeE
Confidence 578999999999999998741 2234445666531 112345554 222 112 67999999999987 6
Q ss_pred CC--CeEEEEeCCeeeE
Q psy16421 78 PP--PSIMWRREGGEMI 92 (151)
Q Consensus 78 ~~--~~~~W~~~~~~~~ 92 (151)
|. +.+.|++ +++.+
T Consensus 152 P~~~~~v~W~~-~g~~~ 167 (221)
T 3m8o_H 152 PQEPLSVTWSE-SGQGV 167 (221)
T ss_dssp SSCSEEEEESC-CSTTC
T ss_pred CCCCEEEEEEE-CCEEC
Confidence 65 4899998 56554
No 281
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.89 E-value=6.9e-09 Score=69.58 Aligned_cols=84 Identities=21% Similarity=0.342 Sum_probs=50.3
Q ss_pred CccccccCCeEEEEEEEcCCCC--CCccceEEEEeccccceeEEe--------ecCCCCeeEeCCCCCceEeecCCeEEE
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP--SVSKRIMLIVQCQYFSKLYIY--------TSSMPPDILDYPTSSDIMVREGSNVSM 70 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~~~~~~~~~~--------~~~~~p~~~~~~~~~~~~~~~g~~~~l 70 (151)
|.+++.+|+|.|.|.+.+..+. .....+.|.|........... ....++.+... ....+.+|+++.|
T Consensus 78 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~G~~v~L 154 (256)
T 3ux9_B 78 ITGLQSEDEADYYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVES---GGGLVQPGGSLRL 154 (256)
T ss_dssp ECSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEC----------------------CCEEEEE---CCEEECTTCCEEE
T ss_pred ECCCChhhCEEEEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcC---CCeEEcCCCeEEE
Confidence 5789999999999999986542 222345566542110000000 00001123332 2456889999999
Q ss_pred EeeecCCC--CCeEEEEeC
Q psy16421 71 RCAASGSP--PPSIMWRRE 87 (151)
Q Consensus 71 ~C~~~g~~--~~~~~W~~~ 87 (151)
.|.+.+.+ .+.+.|++.
T Consensus 155 ~C~~~~~~~~~~~v~W~r~ 173 (256)
T 3ux9_B 155 SCAASGFTFSSYAMSWVRQ 173 (256)
T ss_dssp EEEEESSCGGGSEEEEEEE
T ss_pred EEEEeCCcccccEEEEEEE
Confidence 99998866 789999984
No 282
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=98.89 E-value=8.2e-09 Score=67.75 Aligned_cols=80 Identities=13% Similarity=0.170 Sum_probs=53.8
Q ss_pred eEeecCCeEEEEeeecCCCCC--eEEEEeCCe---eeEecccC----------------------------------CCC
Q psy16421 60 IMVREGSNVSMRCAASGSPPP--SIMWRREGG---EMITNSFN----------------------------------NTV 100 (151)
Q Consensus 60 ~~~~~g~~~~l~C~~~g~~~~--~~~W~~~~~---~~~~~~~~----------------------------------~~~ 100 (151)
+.+..|+++.|.|.+ +.|.| .+.|++.+. ........ +..
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV~~ 95 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSLGAVQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVYA 95 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTTCCEEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEB
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeecccccCcEEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEEEEEEe
Confidence 678899999999999 88888 999998541 11101100 233
Q ss_pred CCeeee-CCceeEeecCCcEEEEeeeccc-CC----CeeEEEcCCceec
Q psy16421 101 PPIVKI-PSQLIGAHEGQQLVLECISEAY-PK----SVNYWTREKGDMI 143 (151)
Q Consensus 101 ~p~~~~-~~~~~~~~~g~~~~l~C~~~g~-p~----~~~~W~k~~~~~~ 143 (151)
+|.... .+. ....|+.+ |.|.+.|. |. +.|.|+|||..+.
T Consensus 96 ~P~~~~i~~~--~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~ 141 (210)
T 1gsm_A 96 FPNQLTVSPA--ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELE 141 (210)
T ss_dssp CCSEEEEESS--SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECT
T ss_pred cCCCcEEccc--eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcc
Confidence 443222 221 45578888 99999985 64 4799999987763
No 283
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.89 E-value=3.3e-09 Score=71.82 Aligned_cols=81 Identities=22% Similarity=0.355 Sum_probs=48.9
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCC--------------eeEeCCCCCceEeecCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPP--------------DILDYPTSSDIMVREGS 66 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p--------------~~~~~~~~~~~~~~~g~ 66 (151)
|.+++.+|+|.|.|.+.|..+........|.|....... ....+| .....+ ....+.+|+
T Consensus 94 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~----~p~~pp~~~~~~~~~~~~~~v~~~~~--~~~~v~~G~ 167 (268)
T 1x9q_A 94 INRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADDA----KKDAAKKDDAKKDDAKKDGGVKLDET--GGGLVQPGG 167 (268)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEC----------------------------CGGGCEEEEE--CCEEECTTC
T ss_pred ECCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccCC----CccccccccccccccccccceEEECC--CceEecCCC
Confidence 578999999999999998754222334455554211000 000011 112222 356788999
Q ss_pred eEEEEeeecCCCC--CeEEEEeC
Q psy16421 67 NVSMRCAASGSPP--PSIMWRRE 87 (151)
Q Consensus 67 ~~~l~C~~~g~~~--~~~~W~~~ 87 (151)
++.|.|.+.+.+. +.+.|++.
T Consensus 168 ~v~L~C~~~~~~~~~~~v~W~k~ 190 (268)
T 1x9q_A 168 AMKLSCVTSGFTFGHYWMNWVRQ 190 (268)
T ss_dssp CEEEEEEEESSCGGGCEEEEEEE
T ss_pred cEEEEEEecCccccccEEEEEEe
Confidence 9999999988653 78999983
No 284
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.88 E-value=4.4e-09 Score=72.16 Aligned_cols=85 Identities=16% Similarity=0.175 Sum_probs=51.1
Q ss_pred CccccccCCeEEEEEEEcCC-CC---CCccceEEEEecc-cccee-EEee-cCCCCeeEeCCCCCceEeecCCeEEEEee
Q psy16421 1 MTEVSREHMGAYLCIASNGV-PP---SVSKRIMLIVQCQ-YFSKL-YIYT-SSMPPDILDYPTSSDIMVREGSNVSMRCA 73 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~-~~---~~~~~~~l~v~~~-~~~~~-~~~~-~~~~p~~~~~~~~~~~~~~~g~~~~l~C~ 73 (151)
|.+++.+|+|.|.|.+.|.. +. .......|.|... ..... ..+. ...++.+...+ ..+.+.+|+++.|.|.
T Consensus 105 I~~v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p--~~~~v~~G~~v~L~C~ 182 (291)
T 2gki_A 105 LSSLTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSP--SSLAVSAGEKVTMSCK 182 (291)
T ss_dssp ECSCCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSC--SEEEEETTSCEEEEEE
T ss_pred ECcCCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCC--CEEEEcCCCcEEEEEE
Confidence 57899999999999999874 21 1112345555310 00000 0000 00123343333 4567889999999999
Q ss_pred ecCCCCC------eEEEEeC
Q psy16421 74 ASGSPPP------SIMWRRE 87 (151)
Q Consensus 74 ~~g~~~~------~~~W~~~ 87 (151)
+.+.+.+ .+.|++.
T Consensus 183 ~~~~~~~~~~~~~~v~W~k~ 202 (291)
T 2gki_A 183 SSQSLFNSRTRKNYLAWYQQ 202 (291)
T ss_dssp ESSCCEETTTTEECEEEEEE
T ss_pred cCCccccccccceeEEEEEE
Confidence 9887765 8999984
No 285
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.88 E-value=1.5e-09 Score=71.12 Aligned_cols=78 Identities=18% Similarity=0.355 Sum_probs=48.2
Q ss_pred CccccccCCeEEEEEEEcCCCC---CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP---SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~---~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~ 77 (151)
|.+++.+|+|.|.|.+.+..+. .......|.|.. ....+|.+...+ ....+.+|+.+.|.|.+.+.
T Consensus 79 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~---------~~~~~P~i~~~~--~~~~~~~g~~v~l~C~~~~~ 147 (215)
T 3nl4_H 79 ITSPTTEDTATYFCVRKYGSEWGGDLWGPGTLVTVSS---------GQPKAPSVFPLA--PCCGDTPSSTVTLGCLVKGY 147 (215)
T ss_dssp ESSCCGGGCEEEEEEEECSSSSCEEEECCCEEEEECS---------SCCBCCEEEEEC--CCTTCCC--CEEEEEEEEEE
T ss_pred ECCCCcccCEEEEEEEecCCCccceEEcCCEEEEEeC---------CCcCCCEEEEec--CCccccCCCcEEEEEEEeee
Confidence 5789999999999999987541 123344555531 112455554222 12245579999999999875
Q ss_pred CC--CeEEEEeCCee
Q psy16421 78 PP--PSIMWRREGGE 90 (151)
Q Consensus 78 ~~--~~~~W~~~~~~ 90 (151)
++ ..+.|++ ++.
T Consensus 148 ~p~~~~v~W~~-~g~ 161 (215)
T 3nl4_H 148 LPEPVTVTWNS-GTL 161 (215)
T ss_dssp BSSCCEEEEGG-GTB
T ss_pred eCCCeEEEEee-CCE
Confidence 43 3577998 454
No 286
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=98.87 E-value=1e-08 Score=68.34 Aligned_cols=29 Identities=21% Similarity=0.575 Sum_probs=26.2
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEe
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRR 86 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~ 86 (151)
..+.+.+|+++.|.|.+.+.+.+.+.|++
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~r 37 (246)
T 4dzb_B 9 SWVISKSGTSVKIECRSLDFQATTMFWYR 37 (246)
T ss_dssp SEEEEETTSCEEEEEEESSSCCCSEEEEE
T ss_pred cEEEEeCCCcEEEEeEecCCCceEEEEEE
Confidence 45778899999999999998999999998
No 287
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=98.87 E-value=2.8e-09 Score=71.64 Aligned_cols=77 Identities=18% Similarity=0.445 Sum_probs=48.1
Q ss_pred CccccccCCeEEEEEEEcCCC---CCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-
Q psy16421 1 MTEVSREHMGAYLCIASNGVP---PSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG- 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~---~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g- 76 (151)
|.+++.+|+|.|.|.+.+... ........|.|.. ....+|.+.... ....+.+|+.+.|.|.+.+
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~---------~~~~~P~i~~~~--~~~~~~~g~~v~L~C~~~g~ 151 (253)
T 3liz_H 83 MSSLKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSA---------AKTTPPSVYPLA--PGSAAQTNSMVTLGCLVKGY 151 (253)
T ss_dssp ECSCCGGGCEEEEEEECCBTTTBCCEECCCEEEEECS---------SCCBCCEEEEEC--C------CCEEEEEEEEEEE
T ss_pred ECCCChhhCEEEEEEEecCCcceeeEECCCEEEEEec---------cCCCCCeEEEec--CCcccCCCCcEEEEEEEeeE
Confidence 578999999999999988631 1223334566531 122455555322 2234557999999999987
Q ss_pred CCCC-eEEEEeCC
Q psy16421 77 SPPP-SIMWRREG 88 (151)
Q Consensus 77 ~~~~-~~~W~~~~ 88 (151)
.|.+ .+.|++++
T Consensus 152 ~P~~~~v~W~~~~ 164 (253)
T 3liz_H 152 FPEPVTVTWNSGS 164 (253)
T ss_dssp BSSCCEEEEGGGT
T ss_pred eCCCeEEEEEeCC
Confidence 6766 89999943
No 288
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=98.87 E-value=3.3e-10 Score=79.49 Aligned_cols=72 Identities=21% Similarity=0.359 Sum_probs=53.0
Q ss_pred CccccccCCe-EEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCC
Q psy16421 1 MTEVSREHMG-AYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPP 79 (151)
Q Consensus 1 i~~v~~~d~G-~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~ 79 (151)
|.+++.+|+| .|+|.|.|..| ..+..+.|.| ..+|.+.. ....+|+.+.|.|.+.|.|.
T Consensus 216 i~~v~~~D~G~~Y~C~a~n~~g-~~~~~~~l~V-------------~~~P~i~~------~~~~~g~~v~l~C~~~g~P~ 275 (347)
T 2ifg_A 216 LANVTSDLNRKNVTCWAENDVG-RAEVSVQVNV-------------SFPASVQL------HTAVEMHHWCIPFSVDGQPA 275 (347)
T ss_dssp EESCCSTTTTCCEEECCEETTE-ECCEEECCCC-------------BEEEEEEE------CCCEESSSEEEEEEEEEESC
T ss_pred EeeCChHHCCCeEEEEEEcCCC-CEEEEEEEEE-------------cCCCeeee------ccCccCceEEEEEEeeecCC
Confidence 4678999999 99999999987 3344444333 34555411 12357899999999999999
Q ss_pred CeEEEEeCCeeeEe
Q psy16421 80 PSIMWRREGGEMIT 93 (151)
Q Consensus 80 ~~~~W~~~~~~~~~ 93 (151)
|.+.|++ +++.+.
T Consensus 276 p~i~W~~-~g~~l~ 288 (347)
T 2ifg_A 276 PSLRWLF-NGSVLN 288 (347)
T ss_dssp CEEEEEE-TTEECC
T ss_pred CcEEEEe-CCEECC
Confidence 9999999 566655
No 289
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=98.86 E-value=1.9e-08 Score=67.33 Aligned_cols=38 Identities=21% Similarity=0.312 Sum_probs=29.3
Q ss_pred CeeEeCCCCCceEeecCCeEEEEeeecCCC-----CCeEEEEeCC
Q psy16421 49 PDILDYPTSSDIMVREGSNVSMRCAASGSP-----PPSIMWRREG 88 (151)
Q Consensus 49 p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~-----~~~~~W~~~~ 88 (151)
+.+...+ ..+.+.+|+++.|.|.+.+.+ .+.+.|++.+
T Consensus 35 ~~v~~~p--~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~ 77 (252)
T 3bkj_L 35 VLMTQTP--LSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQR 77 (252)
T ss_dssp CCEEEEC--SEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEEC
T ss_pred cEEEeCC--ceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEEC
Confidence 3344434 567788999999999999887 6899999843
No 290
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=98.86 E-value=2.8e-09 Score=69.95 Aligned_cols=81 Identities=16% Similarity=0.270 Sum_probs=51.8
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC-CC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS-PP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-~~ 79 (151)
|.+++.+|+|.|.|.+.|..+. ......+.+ +.+..+|.+...+. ....+.+|+.+.|.|.+.|. |.
T Consensus 70 I~~~~~~D~g~Y~C~~~~~~~~-~~~~~~i~~----------~~~~~~P~v~~~~~-~~~~~~~g~~~~L~C~~~g~~P~ 137 (214)
T 1ow0_A 70 GCAEPWNHGKTFTCTAAYPESK-TPLTATLSK----------SGNTFRPEVHLLPP-PSEELALNELVTLTCLARGFSPK 137 (214)
T ss_dssp TTHHHHHHTCEEEEEECCSSCS-SCEEEEEEC----------CSSCCCCEEEEECC-CTTTTTSSSEEEEEEEEEEESSS
T ss_pred EeHHHcCCCCeEEEEEecCCCC-CceeEeecc----------CCCCCCCEEEecCC-CHHHhccCCceEEEEEEeeeECC
Confidence 4567788999999999987652 221222211 12345676644331 22235678999999999884 53
Q ss_pred -CeEEEEeCCeeeEec
Q psy16421 80 -PSIMWRREGGEMITN 94 (151)
Q Consensus 80 -~~~~W~~~~~~~~~~ 94 (151)
+.+.|++ +++.+..
T Consensus 138 ~~~v~W~k-~g~~l~~ 152 (214)
T 1ow0_A 138 DVLVRWLQ-GSQELPR 152 (214)
T ss_dssp CCEEEEEE-TTEECCG
T ss_pred CcEEEEEE-CCEECCC
Confidence 5899999 6666543
No 291
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=98.86 E-value=2.8e-09 Score=70.44 Aligned_cols=30 Identities=20% Similarity=0.520 Sum_probs=19.6
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEeC
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRRE 87 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~ 87 (151)
..+.+.+|+++.|.|.+.+.+.+.+.|++.
T Consensus 31 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~ 60 (233)
T 3bqu_C 31 ASLSMSIGEKVTIRCITSTDIDDDMNWYQQ 60 (233)
T ss_dssp SBC-------CCEEEEEEEEESSCEEEEEE
T ss_pred CeEEEecCCCEEEEEecCCcCCCeEEEEEE
Confidence 467788999999999998877788999984
No 292
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=98.86 E-value=2.8e-08 Score=65.79 Aligned_cols=33 Identities=21% Similarity=0.332 Sum_probs=28.5
Q ss_pred CCceeEeecCCcEEEEeeecccCCCeeEEEcCC
Q psy16421 107 PSQLIGAHEGQQLVLECISEAYPKSVNYWTREK 139 (151)
Q Consensus 107 ~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~ 139 (151)
.+....+.+|+++.|.|.+.+.|.+.+.|+|++
T Consensus 133 ~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~ 165 (238)
T 2p1y_A 133 SPQSLTVWEGETAILNCSYENSAFDYFPWYQQF 165 (238)
T ss_dssp ECSEEEEETTSCEEEEEECCCTTCCEEEEEEEC
T ss_pred cCceEEEeCCCeEEEEEEEecCCCCcEEEEEEC
Confidence 345567889999999999999999999999963
No 293
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=98.85 E-value=4.4e-09 Score=70.62 Aligned_cols=84 Identities=19% Similarity=0.403 Sum_probs=53.4
Q ss_pred CccccccCCeEEEEEEEcCCCC--CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC-
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP--SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS- 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~--~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~- 77 (151)
|.+++.+|+|.|.|.+.+..+. .......|.|... +....+|.+..... ....+.+|+.+.|.|.+.|.
T Consensus 80 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~-------~~~~~~P~v~~~~~-~~~~~~~g~~~~L~C~~~g~~ 151 (252)
T 1oga_E 80 VTSAQKNPTAFYLCASSSRSSYEQYFGPGTRLTVTED-------LKNVFPPEVAVFEP-SEAEISHTQKATLVCLATGFY 151 (252)
T ss_dssp ECSCCSCCCEEEEEEEESSTTSCCEECCCEEEEEESC-------GGGCBCCEEEEECC-CHHHHHHHSEEEEEEEEEEEB
T ss_pred ECcCChhhCEEEEEEEecCCccceeECCCEEEEEecc-------cCCCCCCeEEEECC-ChhhhccCCceEEEEEEeeEc
Confidence 5789999999999999986210 1122345655411 11124566644321 23344578999999999874
Q ss_pred CC-CeEEEEeCCeeeEe
Q psy16421 78 PP-PSIMWRREGGEMIT 93 (151)
Q Consensus 78 ~~-~~~~W~~~~~~~~~ 93 (151)
|. +.+.|++ +++.+.
T Consensus 152 P~~~~v~W~~-~g~~l~ 167 (252)
T 1oga_E 152 PDHVELSWWV-NGKEVH 167 (252)
T ss_dssp SSCEEEEEEE-TTEEEC
T ss_pred CCCcEEEEEE-CCEECC
Confidence 64 4899999 666654
No 294
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.84 E-value=7.3e-09 Score=68.79 Aligned_cols=81 Identities=16% Similarity=0.312 Sum_probs=47.7
Q ss_pred CccccccCCeEEEEEEEcCC--CC---CCccceEEEEeccccceeEEeecCCCCeeEe-CCCCCceEeecC-CeEEEEee
Q psy16421 1 MTEVSREHMGAYLCIASNGV--PP---SVSKRIMLIVQCQYFSKLYIYTSSMPPDILD-YPTSSDIMVREG-SNVSMRCA 73 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~--~~---~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~g-~~~~l~C~ 73 (151)
|.+++.+|+|.|.|.+.+.. +. .......|.|... ...+|.+.. .+ . ..+..| +.+.|.|.
T Consensus 82 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~---------~~~~P~v~~~~p--~-~~~~~g~~~v~L~C~ 149 (232)
T 1dn0_B 82 LSSVTAADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSG---------SASAPTLFPLVS--C-ENSPSDTSSVAVGCL 149 (232)
T ss_dssp ECSCCGGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSS---------CCBCCEEEEEEC--C-------CCSEEEEEE
T ss_pred ECCCCcccCEEEEEEEecCCcCCchhhhcccceEEEEccC---------CCCCCceEEecc--c-cccCCCCCcEEEEEE
Confidence 67899999999999998421 11 1123446666410 112344432 22 1 123467 89999999
Q ss_pred ecCC-CCC-eEEEEeCCeeeEe
Q psy16421 74 ASGS-PPP-SIMWRREGGEMIT 93 (151)
Q Consensus 74 ~~g~-~~~-~~~W~~~~~~~~~ 93 (151)
+.+. |.+ .+.|++.+++.+.
T Consensus 150 ~~g~~P~p~~v~W~~~~g~~l~ 171 (232)
T 1dn0_B 150 AQDFLPDSITFSWKYKNNSDIS 171 (232)
T ss_dssp EEEEBSSCCEEEEEETTSCEEC
T ss_pred EEEEeCCCeEEEEEcCCCCcee
Confidence 9874 766 9999994455543
No 295
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=98.84 E-value=2.9e-08 Score=64.74 Aligned_cols=28 Identities=14% Similarity=0.406 Sum_probs=25.1
Q ss_pred ceEeecCCeEEEEeeecCC-CCCeEEEEe
Q psy16421 59 DIMVREGSNVSMRCAASGS-PPPSIMWRR 86 (151)
Q Consensus 59 ~~~~~~g~~~~l~C~~~g~-~~~~~~W~~ 86 (151)
.+.+.+|+++.|.|.+.+. +.+.+.|++
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~v~W~k 37 (218)
T 3s96_B 9 SASFSLGASAKLTCTLNSQHSTYTIEWYQ 37 (218)
T ss_dssp EEEEETTSCEEEEEEECGGGTTCCEEEEE
T ss_pred cEEECCCCcEEEEEECCCCCCCcEEEEEE
Confidence 4567889999999999998 889999998
No 296
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.84 E-value=3.7e-09 Score=70.99 Aligned_cols=85 Identities=15% Similarity=0.320 Sum_probs=53.0
Q ss_pred CccccccCCeEEEEEEEcCCCC-----CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeec
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP-----SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAAS 75 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~-----~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~ 75 (151)
|.+++.+|+|.|.|.+.+..+. .......|.|... +....+|.+..... ....+.+|+.+.|.|.+.
T Consensus 78 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~-------~~~~~~P~v~~~~~-~~~~~~~g~~~~L~C~~~ 149 (253)
T 3to4_D 78 LQVANMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLED-------LKNVFPPEVAVFEP-SEAEISHTQKATLVCLAT 149 (253)
T ss_dssp EEEESCSSCEEEEEEEECSCCSTTCCEEECCCEEEEEESC-------STTCBCCEEEEEEC-CHHHHHHHSEEEEEEEEE
T ss_pred EccCChhhCeEEEEEEecCCCCcccceEECCCEEEEEecC-------CCCCCCCeEEEeCC-ChhhcccCCceEEEEEEc
Confidence 5789999999999999876431 1122335555310 11124555443221 222334578999999998
Q ss_pred C-CCCC-eEEEEeCCeeeEec
Q psy16421 76 G-SPPP-SIMWRREGGEMITN 94 (151)
Q Consensus 76 g-~~~~-~~~W~~~~~~~~~~ 94 (151)
| .|.+ .+.|++ +++.+..
T Consensus 150 g~~P~~i~v~W~k-~g~~l~~ 169 (253)
T 3to4_D 150 GFYPDHVELSWWV-NGKEVHS 169 (253)
T ss_dssp EEBSSCEEEEEEE-TTEEECT
T ss_pred eEECCcEEEEEEE-CCEECCC
Confidence 8 6666 899999 6776653
No 297
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.83 E-value=1.5e-09 Score=73.97 Aligned_cols=84 Identities=19% Similarity=0.385 Sum_probs=53.2
Q ss_pred CccccccCCeEEEEEEEcCCCC-----CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeec
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP-----SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAAS 75 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~-----~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~ 75 (151)
|.+++.+|+|.|.|.+.|..+. .......|.|... +....+|.+..... ....+.+|+.+.|.|.+.
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~-------~~~~~~P~v~~~~~-~~~~~~~g~~v~L~C~~~ 175 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTED-------LKNVFPPEVAVFEP-SEAEISHTQKATLVCLAT 175 (279)
T ss_dssp ESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESC-------GGGCBCCEEEEEEC-CHHHHHHHSCCEEEEEEE
T ss_pred EccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecC-------CCCCCCCEEEEECC-CcccccCCCceEEEEEEe
Confidence 5789999999999999995320 1123345666421 01123565543221 223345789999999998
Q ss_pred CC-CC-CeEEEEeCCeeeEe
Q psy16421 76 GS-PP-PSIMWRREGGEMIT 93 (151)
Q Consensus 76 g~-~~-~~~~W~~~~~~~~~ 93 (151)
+. |. +.+.|++ +++.+.
T Consensus 176 g~~P~~~~v~W~k-~g~~l~ 194 (279)
T 2wbj_D 176 GFYPDHVELSWWV-NGKEVH 194 (279)
T ss_dssp EEBSSCEEEEEEE-TTEECC
T ss_pred eEcCCCcEEEEEE-CCEECC
Confidence 86 43 6999999 666654
No 298
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=98.83 E-value=1.5e-08 Score=68.51 Aligned_cols=92 Identities=20% Similarity=0.216 Sum_probs=60.2
Q ss_pred CCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEe-------cccC---------------------
Q psy16421 46 SMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMIT-------NSFN--------------------- 97 (151)
Q Consensus 46 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~-------~~~~--------------------- 97 (151)
..+|.+...+ . ..+.+|++++|.|.+.+ +.+.+.|+|++..... ....
T Consensus 5 ~~kP~i~~~P--~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~ 80 (257)
T 1b6u_A 5 HRKPSLLAHP--G-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCY 80 (257)
T ss_dssp CCCCEECCBS--C-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEE
T ss_pred CCCCEEEEcC--C-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEe
Confidence 3567776655 2 57889999999999975 5778999994432110 0000
Q ss_pred --CC---------------------CCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceec
Q psy16421 98 --NT---------------------VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMI 143 (151)
Q Consensus 98 --~~---------------------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~ 143 (151)
.. .+|.+...+. ..+.+|+++.|.|.+.+.| +.|.|+|+|..+.
T Consensus 81 a~~~~~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~~-~~~~w~k~g~~~~ 147 (257)
T 1b6u_A 81 GSVTHSPYQLSAPSDPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSRSSY-DMYHLSREGEAHE 147 (257)
T ss_dssp EECSSCTTSCCCCCCCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECSSCC-SEEEEEETTSSCE
T ss_pred EeccCCCccccccCCCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeCCCCC-cEEEEEECCcccC
Confidence 00 1122222222 2478999999999998864 6899999987554
No 299
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=98.82 E-value=1.9e-08 Score=67.11 Aligned_cols=82 Identities=16% Similarity=0.234 Sum_probs=51.2
Q ss_pred CceEeecCCeEEEEeeecCCCCCe-----EEEEeCCeee----------------------------------EecccC-
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPS-----IMWRREGGEM----------------------------------ITNSFN- 97 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~-----~~W~~~~~~~----------------------------------~~~~~~- 97 (151)
..+.+.+|+++.|.|.+.+.|.+. +.|++.+... +....-
T Consensus 11 ~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~ 90 (248)
T 3pv7_A 11 GTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQ 90 (248)
T ss_dssp SEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCC
T ss_pred CCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCC
Confidence 345677899999999998877765 9999842111 000000
Q ss_pred -------------------------CCCCCeeeeCCceeEeecCCcEEEEeeecc-cCCC-eeEEEcCCc
Q psy16421 98 -------------------------NTVPPIVKIPSQLIGAHEGQQLVLECISEA-YPKS-VNYWTREKG 140 (151)
Q Consensus 98 -------------------------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~-~~~W~k~~~ 140 (151)
+..+|.+...+.. ....|+.+.|.|.+.| +|.| .++|+|+|.
T Consensus 91 ~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~~-~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~ 159 (248)
T 3pv7_A 91 LEEAGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLDQ-VGMKENEDKYMCESSGFYPEAINITWEKQTQ 159 (248)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECS
T ss_pred HHHCeEEEEEEEeCCccceeEEEEEEecCCceEEecCC-ccccCCCcEEEEEEccEECCCeEEEEEECCc
Confidence 2235555544332 2456788889999999 8998 899999875
No 300
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.82 E-value=5.4e-09 Score=70.78 Aligned_cols=79 Identities=19% Similarity=0.338 Sum_probs=49.5
Q ss_pred CccccccCCeEEEEEEEcCCCCC--CccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-C
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPS--VSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-S 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~--~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~ 77 (151)
|.+++.+|+|.|.|.+.+..+.. ....+.|.|... ...+|.+.... ....+.+|+.+.|.|.+.+ .
T Consensus 89 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~---------~~~~P~v~~~~--p~~~v~~g~~v~L~C~~~g~~ 157 (261)
T 2xqy_G 89 LSSLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSA---------KTTAPSVYPLA--PVCGDTTGSSVTLGCLVKGYF 157 (261)
T ss_dssp ECSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSS---------CCBCCEEEEEC--CCCC--CCSEEEEEEEEEEEB
T ss_pred EcCCCcccCeEEEEEEecCCCcceEECCCEEEEEccC---------CCCCCeEEEeC--CCccccCCCcEEEEEEEEeEe
Confidence 67899999999999999864211 123345665410 11245444322 1123567999999999987 4
Q ss_pred CCC-eEEEEeCCeee
Q psy16421 78 PPP-SIMWRREGGEM 91 (151)
Q Consensus 78 ~~~-~~~W~~~~~~~ 91 (151)
|.+ .+.|+++ ++.
T Consensus 158 P~~i~v~W~k~-g~~ 171 (261)
T 2xqy_G 158 PEPVTLTWNSG-SLS 171 (261)
T ss_dssp SSCCEEEEGGG-TCC
T ss_pred CCCCEEEEecC-CCc
Confidence 665 9999994 443
No 301
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=98.80 E-value=8.4e-08 Score=61.72 Aligned_cols=105 Identities=16% Similarity=0.313 Sum_probs=62.5
Q ss_pred ccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CCCC
Q psy16421 2 TEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SPPP 80 (151)
Q Consensus 2 ~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~~~ 80 (151)
.+|+. | |.|.|.+.+. +......+.|.|.. .|..+...+ ....+.+|+.+.|.|.+.| .|..
T Consensus 55 ~~vs~-~-g~y~C~~~c~-~~~~~~~~~l~V~~------------~P~~v~i~~--~~~~~~~G~~~tL~C~v~g~~P~~ 117 (185)
T 1iam_A 55 SNVQE-D-SQPMCYSNCP-DGQSTAKTFLTVYW------------TPERVELAP--LPSWQPVGKQLTLRCQVEGGAPRA 117 (185)
T ss_dssp EEECS-C-BCCEEEEECS-SCEEEEECEEEEEB------------CCSEEEECC--CCSEECTTSEEEEEEEEECCBCGG
T ss_pred EecCc-C-CEEEEEEECC-CCceEEEEEEEEeC------------CCCCCEEcc--CCccccCCCcEEEEEEcCCccCCC
Confidence 46652 4 9999998554 33566677777651 233333433 3345788999999999877 4443
Q ss_pred --eEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeec
Q psy16421 81 --SIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISE 126 (151)
Q Consensus 81 --~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 126 (151)
.+.|++ +++.+............. .......+.+-..|+|.|.
T Consensus 118 ~l~i~w~k-g~~~l~~~~~~~~~~~~t--l~~~~~reD~g~~~sC~A~ 162 (185)
T 1iam_A 118 QLTVVLLR-GEKELKREPAVGEPAEVT--TTVLVRRDHHGAQFSCRTE 162 (185)
T ss_dssp GEEEEEEE-TTEEEEEEECCTTTEEEE--EEEECCSSCSSCEEEEEEE
T ss_pred CcEEEEEe-CCEEcccccCCCccccEE--EEEeceeccCCCeEEEEEE
Confidence 489999 666655322111111111 1111223566779999986
No 302
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=98.80 E-value=4.2e-09 Score=70.41 Aligned_cols=80 Identities=18% Similarity=0.288 Sum_probs=50.7
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~~ 79 (151)
|.+++.+|+|.|+|.+.|..+.. .....+... ..+..+|.+...+. ......|+.+.|.|.+.| .|.
T Consensus 86 I~~~~~~D~g~Y~C~~~~~~~~~-~~~~~v~~~---------~~~~~~P~v~v~~~--~~~~~~g~~~~L~C~~~g~~P~ 153 (239)
T 1i1c_A 86 IVERDWLNGKTFKCKVNSGAFPA-PIEKSISKP---------EGTPRGPQVYTMAP--PKEEMTQSQVSITCMVKGFYPP 153 (239)
T ss_dssp CCHHHHHTTCCEEEEEECSSSSS-CEEEEECCC---------SSCCBCCEEEEECC--CGGGGGSSEEEEEEEEEEEBSS
T ss_pred EEhhHccCCCeEEEEEecccCCC-CcEEEEecC---------CCCCcCCEEEEECC--ChHHhcCCcEEEEEEEeeeECC
Confidence 46678889999999999987632 111121110 12345676655442 222235789999999988 454
Q ss_pred -CeEEEEeCCeeeEe
Q psy16421 80 -PSIMWRREGGEMIT 93 (151)
Q Consensus 80 -~~~~W~~~~~~~~~ 93 (151)
..+.|++ +++.+.
T Consensus 154 ~~~v~W~k-~g~~l~ 167 (239)
T 1i1c_A 154 DIYTEWKM-NGQPQE 167 (239)
T ss_dssp CCEEEEEE-TTEECS
T ss_pred CeEEEEEE-CCEECC
Confidence 4899999 666653
No 303
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=98.80 E-value=4.8e-09 Score=72.74 Aligned_cols=80 Identities=11% Similarity=0.213 Sum_probs=49.8
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~~ 79 (151)
|.+++.+|+|.|+|.|.|..+ . ....+.|... .....+|.+...+. ......|+.+.|.|.+.| .|.
T Consensus 182 I~~~~~~D~G~Y~C~a~n~~~-~--~~~~~~v~~~-------~~~~~~P~v~~~~~--~~~~~~g~~~~l~C~~~g~~p~ 249 (323)
T 2wqr_A 182 VGTRDWIEGETYQCRVTHPHL-P--RALMRSTTKT-------SGPRAAPEVYAFAT--PEWPGSRDKRTLACLIQNFMPE 249 (323)
T ss_dssp CCHHHHHTTCCEEEEEECTTS-S--SCEEEEECCC-------CSCCBCCEEEEEEC--CCCTTCTTEEEEEEEEEEEBSS
T ss_pred ECHHHccCCCCEEEEEECCCC-C--CCeeeEEEcc-------CCCCCCCEEEEeCC--ChHHhcCCcEEEEEEeeeeeCC
Confidence 567788999999999999764 1 2234443210 00224565543321 111223999999999988 444
Q ss_pred C-eEEEEeCCeeeEe
Q psy16421 80 P-SIMWRREGGEMIT 93 (151)
Q Consensus 80 ~-~~~W~~~~~~~~~ 93 (151)
+ .+.|++ +++.+.
T Consensus 250 ~~~v~W~k-~g~~l~ 263 (323)
T 2wqr_A 250 DISVQWLH-NEVQLP 263 (323)
T ss_dssp CCEEEEEE-TTEECC
T ss_pred CcEEEEEE-CCEECC
Confidence 3 799999 666654
No 304
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=98.79 E-value=7.1e-09 Score=67.19 Aligned_cols=29 Identities=17% Similarity=0.291 Sum_probs=25.6
Q ss_pred EeecCCcEEEEeee-cccCCCeeEEEcCCc
Q psy16421 112 GAHEGQQLVLECIS-EAYPKSVNYWTREKG 140 (151)
Q Consensus 112 ~~~~g~~~~l~C~~-~g~p~~~~~W~k~~~ 140 (151)
.+.+|+.+.|.|.+ .|.|.|.+.|+|++.
T Consensus 132 ~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~ 161 (214)
T 3jz7_A 132 SEEIGNDFKLKCEPKEGSLPLQFEWQKLSD 161 (214)
T ss_dssp CCBTTCCEEEEEECSBCCSSCEEEEEECST
T ss_pred ceecCCcEEEEecCCCCCCCCEEEEEECCC
Confidence 46789999999999 899999999999643
No 305
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.79 E-value=1e-08 Score=68.09 Aligned_cols=34 Identities=18% Similarity=0.259 Sum_probs=25.8
Q ss_pred CceEeecCCeEEEEeeecC-CCC-C-eEEEEeCCeeeE
Q psy16421 58 SDIMVREGSNVSMRCAASG-SPP-P-SIMWRREGGEMI 92 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g-~~~-~-~~~W~~~~~~~~ 92 (151)
....+.+|+.+.|.|.+.| .|. | .+.|++ +++.+
T Consensus 21 ~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~-~g~~~ 57 (231)
T 2w59_A 21 SPGELYISLDAKLRCLVVNLPSDSSLSVTWTR-EKSGN 57 (231)
T ss_dssp CHHHHHTSCCCEEEEEEEEESCCTTCEEEEEC-SSSSC
T ss_pred ChhhcccCCceEEEEEEeCccCCCCeEEEEEc-CCeec
Confidence 4456678999999999988 463 4 999998 55444
No 306
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=98.79 E-value=7.9e-08 Score=64.00 Aligned_cols=34 Identities=15% Similarity=0.307 Sum_probs=28.9
Q ss_pred eeeCCceeEeecCCcEEEEeeecccCCCeeEEEc
Q psy16421 104 VKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTR 137 (151)
Q Consensus 104 ~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k 137 (151)
+...+....+.+|+++.|.|.+.+.|.+.+.|+|
T Consensus 138 ~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k 171 (247)
T 2ghw_B 138 LTQSPATLSLSPGERATLSCRASQSVRSNLAWYQ 171 (247)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCTTCEEEEE
T ss_pred EEccCCEEEecCCCcEEEEEEeCCCccceEEEEE
Confidence 3444556678899999999999999999999999
No 307
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=98.79 E-value=7.5e-08 Score=64.21 Aligned_cols=30 Identities=23% Similarity=0.453 Sum_probs=26.7
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEeC
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRRE 87 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~ 87 (151)
..+.+.+|+++.|.|.+.+.+.+.+.|++.
T Consensus 12 ~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~ 41 (250)
T 3esu_F 12 SSLSASLGDRVTISCRASQDIRNYLNWYQQ 41 (250)
T ss_dssp SEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred CEEEeeCCCcEEEEEEecccCCceEEEEEE
Confidence 456788999999999999999999999983
No 308
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=98.78 E-value=1.1e-08 Score=69.82 Aligned_cols=83 Identities=13% Similarity=0.203 Sum_probs=49.8
Q ss_pred CccccccCCeEEEEEEEcC--------CCCCCccceEEEEeccccc--eeEEeecCCCCeeEeCCCCCceEeecCCeEEE
Q psy16421 1 MTEVSREHMGAYLCIASNG--------VPPSVSKRIMLIVQCQYFS--KLYIYTSSMPPDILDYPTSSDIMVREGSNVSM 70 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~--------~~~~~~~~~~l~v~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l 70 (151)
|.+++.+|+|.|.|.+.+. ..........|.|...... .........++.+...+ . +.+.+|+++.|
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p--~-~~v~~G~~v~L 159 (280)
T 3fku_X 83 LRSLRSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPP--S-VSKGLRQTATL 159 (280)
T ss_dssp ECSCCSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCS--E-EEECTTCCEEE
T ss_pred ECCCChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCC--c-EEEecCCCEEE
Confidence 5789999999999999886 1112233445555310000 00000011234444433 3 77889999999
Q ss_pred EeeecC-CC-CCeEEEEe
Q psy16421 71 RCAASG-SP-PPSIMWRR 86 (151)
Q Consensus 71 ~C~~~g-~~-~~~~~W~~ 86 (151)
.|.+.+ .+ .+.+.|++
T Consensus 160 ~C~~~~~~~~~~~v~W~r 177 (280)
T 3fku_X 160 TCTGNSNNVGNQGAAWLQ 177 (280)
T ss_dssp EEECCCCCCCTTCCEEEE
T ss_pred EEEecCCCCCCceEEEEE
Confidence 999987 44 47899987
No 309
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.78 E-value=2.4e-08 Score=70.93 Aligned_cols=81 Identities=11% Similarity=0.180 Sum_probs=52.9
Q ss_pred eecCCeEEEEeeecCC-CC---CeEEEEeCCeeeEeccc--------C--------------------------------
Q psy16421 62 VREGSNVSMRCAASGS-PP---PSIMWRREGGEMITNSF--------N-------------------------------- 97 (151)
Q Consensus 62 ~~~g~~~~l~C~~~g~-~~---~~~~W~~~~~~~~~~~~--------~-------------------------------- 97 (151)
+..|+++.|.|.+.|. |. ..+.|+++++....... .
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 259 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 259 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCC
Confidence 6779999999999886 32 36999995533211100 0
Q ss_pred -----------CCCCCeeeeCCceeEeecCCcEEEEeeeccc-C-CCeeEEEcCCcee
Q psy16421 98 -----------NTVPPIVKIPSQLIGAHEGQQLVLECISEAY-P-KSVNYWTREKGDM 142 (151)
Q Consensus 98 -----------~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~-p-~~~~~W~k~~~~~ 142 (151)
...+|.+.+.+.......|+.+.|.|.+.|. | .+.|+|+|||..+
T Consensus 260 ~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~ 317 (376)
T 2aty_A 260 PIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPA 317 (376)
T ss_pred ceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEEC
Confidence 1123444444333334468899999999995 4 3579999998765
No 310
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=98.78 E-value=2.4e-08 Score=64.95 Aligned_cols=43 Identities=12% Similarity=0.248 Sum_probs=29.8
Q ss_pred CCeeeeCCceeEeecCCcEEEEeeecccC--CCeeEEEcCCceec
Q psy16421 101 PPIVKIPSQLIGAHEGQQLVLECISEAYP--KSVNYWTREKGDMI 143 (151)
Q Consensus 101 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p--~~~~~W~k~~~~~~ 143 (151)
+|.+...+....+.+|+.+.|.|.+.|.+ .+.+.|+|+|..+.
T Consensus 111 ~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~ 155 (211)
T 3tv3_L 111 APSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVK 155 (211)
T ss_dssp CCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred CCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecC
Confidence 34444333333334699999999999863 46799999987664
No 311
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=98.78 E-value=1e-08 Score=66.87 Aligned_cols=57 Identities=16% Similarity=0.321 Sum_probs=36.8
Q ss_pred cCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCC----CCCeeeeCCceeEe-ecCCcEEEEeeecc
Q psy16421 64 EGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNT----VPPIVKIPSQLIGA-HEGQQLVLECISEA 127 (151)
Q Consensus 64 ~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~----~~p~~~~~~~~~~~-~~g~~~~l~C~~~g 127 (151)
+|+++.|.|. +.|.|.+.|++ ++..+....... ....+.+. .+ ...+.....|.+..
T Consensus 127 ~G~~v~L~C~--g~p~p~i~W~k-~~~~l~~~~~~~~~~~~~~~L~I~----~v~~~~D~G~Y~C~A~N 188 (204)
T 1sy6_A 127 SGTTVILTCP--QYPGSEILWQH-NDKNIGGDEDDKNIGSDEDHLSLK----EFSELEQSGYYVCYPRG 188 (204)
T ss_dssp ETTEEEEECS--CCCSSCEEEEE-TTEEESCCTTCTTEEEETTEEEET----TCCHHHHCEEEEEEETT
T ss_pred cCCcEEEEcC--CCCCCceEEEE-CCEECCCccCCceEecCCCEEEEe----eCCccccCEEEEEEecc
Confidence 8999999999 77889999999 566654321100 01122222 13 45677899999864
No 312
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=98.78 E-value=2e-08 Score=65.39 Aligned_cols=30 Identities=20% Similarity=0.516 Sum_probs=25.7
Q ss_pred EeecCCcEEEEeeeccc-CCC-eeEEEcCCce
Q psy16421 112 GAHEGQQLVLECISEAY-PKS-VNYWTREKGD 141 (151)
Q Consensus 112 ~~~~g~~~~l~C~~~g~-p~~-~~~W~k~~~~ 141 (151)
.+.+|+.+.|.|.+.|. |.| .++|++++..
T Consensus 129 ~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~ 160 (210)
T 3d9a_H 129 AAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 160 (210)
T ss_dssp SCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred ccccCCcEEEEEEEeeEecCCcEEEEeeCCcc
Confidence 35689999999999986 888 8999998764
No 313
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=98.78 E-value=4e-08 Score=64.15 Aligned_cols=30 Identities=13% Similarity=0.377 Sum_probs=24.4
Q ss_pred cCCcEEEEeeecc-cCCC-eeEEEcCCceecc
Q psy16421 115 EGQQLVLECISEA-YPKS-VNYWTREKGDMIA 144 (151)
Q Consensus 115 ~g~~~~l~C~~~g-~p~~-~~~W~k~~~~~~~ 144 (151)
.|+.+.|.|.+.| .|++ .++|+|+|..+..
T Consensus 128 ~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~ 159 (216)
T 2xzc_L 128 KSGTASVVCLLNNFYPREAKVQWKVDNALQSG 159 (216)
T ss_dssp HTTEEEEEEEEEEEBSSCCEEEEEETTEECCS
T ss_pred cCCcEEEEEEEEeEcCCceEEEEEECCeecCC
Confidence 5889999999998 5555 7999999876543
No 314
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.77 E-value=3.2e-09 Score=71.77 Aligned_cols=79 Identities=19% Similarity=0.427 Sum_probs=43.6
Q ss_pred CccccccCCeEEEEEEEcCCCC------------CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeE
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP------------SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNV 68 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~------------~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~ 68 (151)
|.+++.+|+|.|.|.+.+..+. .......|.|... ...+|.+.... ....+.+|+.+
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~---------~~~~P~v~~~~--p~~~~~~g~~v 151 (257)
T 3bn9_D 83 MSSLRAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSA---------STKGPSVFPLA--PSSKSTSGGTA 151 (257)
T ss_dssp EESCCGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSS---------CCBCCEECCCC--C----------
T ss_pred ECCCChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCC---------CCcCCcEEEec--CcccccCCCcE
Confidence 5789999999999999987541 0112345655310 11245543322 11235678999
Q ss_pred EEEeeecCC-CCC-eEEEEeCCeee
Q psy16421 69 SMRCAASGS-PPP-SIMWRREGGEM 91 (151)
Q Consensus 69 ~l~C~~~g~-~~~-~~~W~~~~~~~ 91 (151)
.|.|.+.+. |.+ .+.|++ +++.
T Consensus 152 ~L~C~~~g~~P~pi~v~W~k-~g~~ 175 (257)
T 3bn9_D 152 ALGCLVKDYFPEPVTVSWNS-GALT 175 (257)
T ss_dssp -CCCEEEEEBSSCCEEEETT-TTCC
T ss_pred EEEEEEeeEECCCcEEEEee-CCCc
Confidence 999999874 766 899999 4544
No 315
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.77 E-value=1.1e-08 Score=58.92 Aligned_cols=48 Identities=13% Similarity=0.178 Sum_probs=40.8
Q ss_pred CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccCC
Q psy16421 99 TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIANG 146 (151)
Q Consensus 99 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~~ 146 (151)
..+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+|+|..+....
T Consensus 3 ~~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~ 50 (100)
T 2kdg_A 3 MGPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDD 50 (100)
T ss_dssp CEEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCS
T ss_pred CCCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCC
Confidence 346777777888889999999999999999999999999987765543
No 316
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=98.75 E-value=5.7e-08 Score=63.50 Aligned_cols=39 Identities=21% Similarity=0.566 Sum_probs=26.8
Q ss_pred CeeeeCCceeEeecCCcEEEEeee-cccCCCeeEEEcCCce
Q psy16421 102 PIVKIPSQLIGAHEGQQLVLECIS-EAYPKSVNYWTREKGD 141 (151)
Q Consensus 102 p~~~~~~~~~~~~~g~~~~l~C~~-~g~p~~~~~W~k~~~~ 141 (151)
|.+...+ ...+.+|+.+.|.|.+ .|.|.|.+.|+++++.
T Consensus 112 p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~ 151 (222)
T 4i0k_A 112 PSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGV 151 (222)
T ss_dssp CEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSC
T ss_pred CcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCc
Confidence 4444433 3357789999999999 7899999999995443
No 317
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=98.75 E-value=2e-08 Score=58.13 Aligned_cols=47 Identities=11% Similarity=0.125 Sum_probs=40.9
Q ss_pred CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 99 TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 99 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
..+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+|++..+..+
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~ 52 (103)
T 3qp3_A 6 DHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQES 52 (103)
T ss_dssp CEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCC
T ss_pred CCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCC
Confidence 45678888888889999999999999999999999999998766543
No 318
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=98.74 E-value=2.2e-08 Score=57.44 Aligned_cols=45 Identities=11% Similarity=0.073 Sum_probs=39.7
Q ss_pred CCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 100 VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 100 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
.+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+|+|..+..
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~ 48 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIER 48 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCC
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCC
Confidence 467888888888999999999999999999999999999876654
No 319
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=98.74 E-value=6.1e-08 Score=62.16 Aligned_cols=28 Identities=11% Similarity=0.274 Sum_probs=24.5
Q ss_pred eecCCcEEEEeeecccCCCeeEEEcCCceec
Q psy16421 113 AHEGQQLVLECISEAYPKSVNYWTREKGDMI 143 (151)
Q Consensus 113 ~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~ 143 (151)
+.+|+++.|.|.+ |.|.+.|+|||..+.
T Consensus 119 ~~~G~~v~l~C~~---p~p~i~W~k~g~~i~ 146 (186)
T 1jbj_A 119 SRGDGSVLLTCGL---TDKTIKWLKDGSIIS 146 (186)
T ss_dssp CSSSCEEEEECSS---SCSCEEEEETTEECC
T ss_pred cCCCCeEEEEeeC---CCCeEEEEECCEECc
Confidence 3499999999999 889999999987764
No 320
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=98.74 E-value=1.1e-07 Score=64.51 Aligned_cols=37 Identities=22% Similarity=0.502 Sum_probs=29.7
Q ss_pred CeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeC
Q psy16421 49 PDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRRE 87 (151)
Q Consensus 49 p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~ 87 (151)
+.+...+ ..+.+.+|+++.|.|.+.+.+.+.+.|++.
T Consensus 13 ~~v~~~p--~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~ 49 (276)
T 3auv_A 13 IQMTQSP--SSLSASVGDRVTITCRASQDVSTAVAWYQQ 49 (276)
T ss_dssp CCEEEEC--SEEECCTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred eeEEeCC--CeEEEcCCCCEEEEeEcCCCCCCcEEEEEE
Confidence 3344434 567788999999999999988999999984
No 321
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=98.74 E-value=1.9e-08 Score=57.26 Aligned_cols=40 Identities=23% Similarity=0.243 Sum_probs=36.4
Q ss_pred CCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCC
Q psy16421 100 VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREK 139 (151)
Q Consensus 100 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~ 139 (151)
.+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|+|++
T Consensus 1 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~ 40 (93)
T 1wit_A 1 LKPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGD 40 (93)
T ss_dssp CCCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECST
T ss_pred CCCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECC
Confidence 3678877778889999999999999999999999999998
No 322
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.74 E-value=1e-07 Score=63.18 Aligned_cols=81 Identities=16% Similarity=0.279 Sum_probs=55.6
Q ss_pred CceEeecCCeEEEEeeecCCC----CCeEEEEeCC-ee---eE--------------------------ecccC------
Q psy16421 58 SDIMVREGSNVSMRCAASGSP----PPSIMWRREG-GE---MI--------------------------TNSFN------ 97 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~----~~~~~W~~~~-~~---~~--------------------------~~~~~------ 97 (151)
..+.+.+|+++.|.|.+.+.+ .+.+.|++.+ +. .+ ....-
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 88 (240)
T 1moe_A 9 ASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVA 88 (240)
T ss_dssp SEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhCE
Confidence 457788999999999999987 7889999842 11 01 00000
Q ss_pred ---------------------CCC------CCeeeeCCceeEeecCCcEEEEeeecccCC--CeeEEEcC
Q psy16421 98 ---------------------NTV------PPIVKIPSQLIGAHEGQQLVLECISEAYPK--SVNYWTRE 138 (151)
Q Consensus 98 ---------------------~~~------~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~--~~~~W~k~ 138 (151)
+.. ++.+...+....+.+|+++.|.|.+.|.|. +.+.|+|+
T Consensus 89 ~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 89 TYYCQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQ 158 (240)
T ss_dssp EEEEEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred EEEEEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEE
Confidence 011 112333345567889999999999999874 58999995
No 323
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=98.74 E-value=2e-08 Score=57.62 Aligned_cols=45 Identities=24% Similarity=0.444 Sum_probs=39.7
Q ss_pred CCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 100 VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 100 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
.+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+|++..+..
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~ 48 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRP 48 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCC
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCC
Confidence 467888888888999999999999999999999999999776654
No 324
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=98.73 E-value=2.1e-07 Score=62.61 Aligned_cols=35 Identities=14% Similarity=0.096 Sum_probs=28.7
Q ss_pred eCCceeEeecCCcEEEEeeecccCCC-----eeEEEc--CCc
Q psy16421 106 IPSQLIGAHEGQQLVLECISEAYPKS-----VNYWTR--EKG 140 (151)
Q Consensus 106 ~~~~~~~~~~g~~~~l~C~~~g~p~~-----~~~W~k--~~~ 140 (151)
..+....+.+|+++.|.|.+.+.|.+ .+.|+| +|.
T Consensus 126 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~ 167 (256)
T 1nqb_A 126 QTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQ 167 (256)
T ss_dssp EECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTS
T ss_pred ecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCC
Confidence 34556678999999999999998876 899999 554
No 325
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.73 E-value=1.2e-08 Score=68.09 Aligned_cols=82 Identities=13% Similarity=0.235 Sum_probs=49.3
Q ss_pred CccccccCCeEEEEEEEcCCC-C-----CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeee
Q psy16421 1 MTEVSREHMGAYLCIASNGVP-P-----SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA 74 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~-~-----~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~ 74 (151)
|.+++.+|+|.|.|.+.+... . .......|.|..... ....+|...... +....+.+|+.+.|.|.+
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~------~~~~~p~~~v~~-p~~~~~~~g~~v~L~C~~ 156 (242)
T 1hxm_B 84 IHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQL------DADVSPKPTIFL-PSIAETKLQKAGTYLCLL 156 (242)
T ss_dssp ECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCC------CSCCSCBCCCCC-CCGGGGGSSSCEEEEEEE
T ss_pred ECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEccccc------CCCcCCCceEEC-CChhhcccCCCceEEEEE
Confidence 578999999999999988631 0 112345666642110 000123222211 123345579999999999
Q ss_pred cCC-CC-CeEEEEeCCe
Q psy16421 75 SGS-PP-PSIMWRREGG 89 (151)
Q Consensus 75 ~g~-~~-~~~~W~~~~~ 89 (151)
.|. |. +.+.|++++.
T Consensus 157 ~g~~P~~~~v~W~~~~~ 173 (242)
T 1hxm_B 157 EKFFPDVIKIHWEEKKS 173 (242)
T ss_dssp EEESSCCEEEEEEESSS
T ss_pred eeEECCCeEEEEEcCCC
Confidence 875 54 7899999543
No 326
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=98.70 E-value=1.5e-07 Score=62.45 Aligned_cols=28 Identities=14% Similarity=0.493 Sum_probs=24.4
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEe
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRR 86 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~ 86 (151)
..+.+.+|+++.|.|.+.+ +.+.+.|++
T Consensus 10 ~~v~v~~G~~v~L~C~~~~-~~~~v~W~k 37 (240)
T 3q5y_A 10 RHIIKEKGGRSVLTCIPIS-GHSNVVWYQ 37 (240)
T ss_dssp SEEEEETTCCEEEEEECCT-TCCEEEEEE
T ss_pred ceeeecCCCcEEEEEEeCC-CCceEEEEE
Confidence 4577889999999999876 778999998
No 327
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=98.70 E-value=9.6e-08 Score=64.16 Aligned_cols=36 Identities=14% Similarity=0.274 Sum_probs=29.3
Q ss_pred eeeeCCceeEeecCCcEEEEeeeccc-CCCeeEEEcC
Q psy16421 103 IVKIPSQLIGAHEGQQLVLECISEAY-PKSVNYWTRE 138 (151)
Q Consensus 103 ~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~~~~W~k~ 138 (151)
.+...+....+.+|+++.|.|.+.+. |.+.+.|+|.
T Consensus 138 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~ 174 (259)
T 3omz_A 138 KVTQAQSSVSMPVRKAVTLNCLYETSWWSYYIFWYKR 174 (259)
T ss_dssp EEECCCCCEEEETTCCEEECCEEECCCSSCEEEEEEE
T ss_pred eeEEeCCEEEEcCCCCEEEEEECCCccCCceEEEeee
Confidence 44555666788999999999998874 7888999984
No 328
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=98.69 E-value=2.7e-08 Score=66.02 Aligned_cols=81 Identities=17% Similarity=0.253 Sum_probs=49.3
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC-C-
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS-P- 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-~- 78 (151)
|.+++.+|+|.|+|.+.|..+. ..+.+.|.... ....+|.+..... .... ..+..+.|.|.+.|. |
T Consensus 81 I~~~~~~D~g~Y~C~~~~~~~~---~~~~~~v~~~~-------~~~~~P~v~v~~~-~~~~-~~~~~~~L~C~~~g~~P~ 148 (231)
T 2w59_A 81 VSTQDWLSGERFTCTVQHEELP---LPLSKSVYRNT-------GPTTPPLIYPFAP-HPEE-LSLSRVTLSCLVRGFRPR 148 (231)
T ss_dssp CCHHHHHTTCCEEEEEECTTCS---SCEEEEECCCC-------SCCBCCEEEEECC-CGGG-GGSSEEEEEEEEEEEBSS
T ss_pred ecchhccCCCEEEEEEEcCCCC---CceEEEEecCC-------CCCcCCEEEEeCC-CHHH-hccCceEEEEEEEeccCC
Confidence 4567788999999999998652 33444442100 0123555543221 1111 235679999999884 4
Q ss_pred CCeEEEEeCCeeeEec
Q psy16421 79 PPSIMWRREGGEMITN 94 (151)
Q Consensus 79 ~~~~~W~~~~~~~~~~ 94 (151)
.+.+.|++ +++.+..
T Consensus 149 ~~~v~W~k-~g~~l~~ 163 (231)
T 2w59_A 149 DIEIRWLR-DHRAVPA 163 (231)
T ss_dssp CCEEEEEE-TTEECCG
T ss_pred CcEEEEEE-CCEECCC
Confidence 47899999 6776653
No 329
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=98.69 E-value=1.6e-07 Score=62.60 Aligned_cols=30 Identities=27% Similarity=0.390 Sum_probs=26.6
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEeC
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRRE 87 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~ 87 (151)
..+.+.+|+++.|.|.+.+.+.+.+.|++.
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 38 (242)
T 2znx_A 9 ATLSVTPGNSVSLSCRASQSIGNNLHXYQQ 38 (242)
T ss_dssp SEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred CeEEEcCCCcEEEEEEeCCCCCceEEEEEe
Confidence 457788999999999999988899999984
No 330
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.69 E-value=4.9e-08 Score=56.14 Aligned_cols=45 Identities=20% Similarity=0.259 Sum_probs=40.6
Q ss_pred CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceec
Q psy16421 99 TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMI 143 (151)
Q Consensus 99 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~ 143 (151)
..+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+|++..+.
T Consensus 6 ~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~ 50 (100)
T 2edj_A 6 SGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFP 50 (100)
T ss_dssp CSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEES
T ss_pred CCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECC
Confidence 467888888888899999999999999999999999999987765
No 331
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=98.69 E-value=1.9e-08 Score=65.51 Aligned_cols=74 Identities=20% Similarity=0.334 Sum_probs=43.9
Q ss_pred cCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC-CC-CeEEE
Q psy16421 7 EHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS-PP-PSIMW 84 (151)
Q Consensus 7 ~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-~~-~~~~W 84 (151)
+|+|.|+|.|.|..+.. .....+.+. ..+..+|.+...+. .. ....|..+.|.|.+.|. |. +.+.|
T Consensus 78 ~d~g~Y~C~a~n~~~~~-~~~~~v~~~---------~~~~~~P~v~~~~~-~~-~~~~~~~~~L~C~~~g~~P~~~~v~W 145 (207)
T 1l6x_A 78 LNGKEYKCKVSNKALPA-PIEKTISKA---------KGQPREPQVYTLPP-SR-DELTKNQVSLTCLVKGFYPSDIAVEW 145 (207)
T ss_dssp HTTCCEEEEEECTTSSS-CEEEEECCC---------CSCCBCCEEEEECC-CG-GGGGSSEEEEEEEEEEEBSSCCEEEE
T ss_pred cCCceEEEEEEcCcCCc-ceEEEeccC---------CCCCcCCEEEEECC-Ch-HHhcCCcEEEEEEEeCeECCCeEEEE
Confidence 34999999999986632 111122110 02335666554331 11 12346679999999884 54 48999
Q ss_pred EeCCeeeEe
Q psy16421 85 RREGGEMIT 93 (151)
Q Consensus 85 ~~~~~~~~~ 93 (151)
++ +++.+.
T Consensus 146 ~k-~g~~~~ 153 (207)
T 1l6x_A 146 ES-NGQPEN 153 (207)
T ss_dssp EE-TTEEEC
T ss_pred EE-CCeecc
Confidence 99 566654
No 332
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=98.69 E-value=6.5e-08 Score=61.54 Aligned_cols=30 Identities=13% Similarity=0.016 Sum_probs=25.7
Q ss_pred cCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 115 EGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 115 ~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
.+.++.|.|.+.|.|.|.+.|+|+|..+..
T Consensus 109 ~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~ 138 (176)
T 1hng_A 109 ECSNATLTCEVLEGTDVELKLYQGKEHLRS 138 (176)
T ss_dssp ETTTTEEEEECSSCSSCEEEEEETTEEEEE
T ss_pred cCCcEEEEEEecCCCCcEEEEEECCEECCC
Confidence 456799999999999999999999876654
No 333
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=98.69 E-value=1.6e-07 Score=62.42 Aligned_cols=28 Identities=21% Similarity=0.439 Sum_probs=24.2
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEe
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRR 86 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~ 86 (151)
..+.+.+|+++.|.| ..+.+.+.+.|++
T Consensus 10 ~~v~v~~G~~v~L~C-~~~~~~~~v~W~r 37 (245)
T 4ei6_B 10 SHQIIDMGQMVTLNC-DPVSNHLYFYWYK 37 (245)
T ss_dssp SEEEEETTCCEEEEE-ECCTTCCEEEEEE
T ss_pred ceEEecCCCCEEEEE-EcCCCCCEEEEEE
Confidence 457888999999999 6677889999998
No 334
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.68 E-value=4.8e-08 Score=57.66 Aligned_cols=46 Identities=9% Similarity=0.052 Sum_probs=40.5
Q ss_pred CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 99 TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 99 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
..+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+|++..+..
T Consensus 5 ~~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~ 50 (114)
T 2cqv_A 5 SSGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQE 50 (114)
T ss_dssp CCCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCC
T ss_pred CCCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcC
Confidence 3578888888888999999999999999999999999999876653
No 335
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.68 E-value=2.6e-08 Score=57.21 Aligned_cols=46 Identities=22% Similarity=0.278 Sum_probs=40.5
Q ss_pred CCCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceec
Q psy16421 98 NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMI 143 (151)
Q Consensus 98 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~ 143 (151)
+..+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+|+|..+.
T Consensus 8 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~ 53 (99)
T 2yr3_A 8 MEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQ 53 (99)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCS
T ss_pred cccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECc
Confidence 3567888888888899999999999999999999999999976654
No 336
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.68 E-value=2e-08 Score=57.59 Aligned_cols=45 Identities=20% Similarity=0.403 Sum_probs=39.0
Q ss_pred CCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 100 VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 100 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
.+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+|++..+..
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~ 48 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHS 48 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCT
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeec
Confidence 467777778888999999999999999999999999998776643
No 337
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=98.67 E-value=2.3e-08 Score=59.25 Aligned_cols=47 Identities=17% Similarity=0.328 Sum_probs=41.1
Q ss_pred CCCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 98 NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+..+|.|...+....+.+|+++.|.|.+.|.|.|.++|+|++..+..
T Consensus 6 ~~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~ 52 (117)
T 2v9t_A 6 EDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVET 52 (117)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCC
T ss_pred ccCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccc
Confidence 34678888888888899999999999999999999999999776654
No 338
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=98.67 E-value=2e-07 Score=71.42 Aligned_cols=77 Identities=17% Similarity=0.239 Sum_probs=56.9
Q ss_pred CCeEEEEeeecCCCCCeEEEEeCCeee-------Eecc---cC----------------------------CCCCCeeee
Q psy16421 65 GSNVSMRCAASGSPPPSIMWRREGGEM-------ITNS---FN----------------------------NTVPPIVKI 106 (151)
Q Consensus 65 g~~~~l~C~~~g~~~~~~~W~~~~~~~-------~~~~---~~----------------------------~~~~p~~~~ 106 (151)
..++.+.|.+.|.|.|.+.|.+++.+. +... .. ...+|.|.
T Consensus 91 ~g~l~v~c~~~g~P~p~i~W~k~g~~~~~~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~~- 169 (731)
T 2v5y_A 91 PGLLNVYVKVNNGPLGNPIWNISGDPTRTWNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHFL- 169 (731)
T ss_dssp SEEEEEEEEETTCCCCSEEEEECCCCCSSCEEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEEC-
T ss_pred cceEEEEEecCCCCccceeEEEeCCcCCceeEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeecccccccccc-
Confidence 458999999999999999999954321 1001 00 12456666
Q ss_pred CCceeEeecCCcEEEEeeecccCCCeeE-EE--cCCcee
Q psy16421 107 PSQLIGAHEGQQLVLECISEAYPKSVNY-WT--REKGDM 142 (151)
Q Consensus 107 ~~~~~~~~~g~~~~l~C~~~g~p~~~~~-W~--k~~~~~ 142 (151)
.+....+..|+++.|.|.+.|.|.|.+. |+ +||..+
T Consensus 170 ~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l 208 (731)
T 2v5y_A 170 RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDA 208 (731)
T ss_dssp CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCE
T ss_pred cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccc
Confidence 4556889999999999999999999987 88 776544
No 339
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=98.67 E-value=2.6e-08 Score=65.90 Aligned_cols=78 Identities=18% Similarity=0.408 Sum_probs=44.9
Q ss_pred CccccccCCeEEEEEEEcCCCC-------CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEee
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP-------SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCA 73 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~-------~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~ 73 (151)
|.+++.+|+|.|.|.+.+..+. .......|.|.. ....+|.+.... ....+..|+.+.|.|.
T Consensus 87 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~---------~~~~~P~v~~~~--~~~~~~~g~~v~L~C~ 155 (232)
T 3qhz_H 87 MTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSS---------ASTKGPSVFPLA--PSSKSTSGGTAALGCL 155 (232)
T ss_dssp ECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECS---------SCCBCCEEEEEC--C-------CEEEEEEE
T ss_pred ECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEec---------CCCCCCEEEEec--ccccccCCCcEEEEEE
Confidence 5789999999999999876310 122334555531 122455554222 1234556999999999
Q ss_pred ecCC-C-CCeEEEEeCCee
Q psy16421 74 ASGS-P-PPSIMWRREGGE 90 (151)
Q Consensus 74 ~~g~-~-~~~~~W~~~~~~ 90 (151)
+.+. | ...+.|++ ++.
T Consensus 156 ~~~~~P~~~~v~W~~-~g~ 173 (232)
T 3qhz_H 156 VKDYFPEPVTVSWNS-GAL 173 (232)
T ss_dssp EEEEBSSCCEEEEGG-GTB
T ss_pred EeeEeCCCeEEEEEE-CCE
Confidence 8774 3 33577998 443
No 340
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=98.66 E-value=8.1e-08 Score=54.34 Aligned_cols=45 Identities=16% Similarity=0.279 Sum_probs=38.8
Q ss_pred CCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 101 PPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 101 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
++.|...+....+.+|+++.|.|.+.|.|.|.+.|+|+|..+...
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~ 47 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE 47 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTC
T ss_pred ceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcC
Confidence 567777888888999999999999999999999999997765443
No 341
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=98.66 E-value=2.3e-07 Score=62.08 Aligned_cols=37 Identities=11% Similarity=0.276 Sum_probs=30.7
Q ss_pred CeeeeCCceeEeecCCcEEEEeeecccCCC----eeEEEcC
Q psy16421 102 PIVKIPSQLIGAHEGQQLVLECISEAYPKS----VNYWTRE 138 (151)
Q Consensus 102 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~----~~~W~k~ 138 (151)
+.+...+....+.+|+++.|.|.+.+.|.+ .+.|+|+
T Consensus 134 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~ 174 (253)
T 3uzq_A 134 LVMTQTPASLAVSLGQRATISCRASENVDRYGNSFMHWYQQ 174 (253)
T ss_dssp CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEE
T ss_pred ceEECcCCeEEEeCCCCEEEEEEecCccccCCCcEEEEEEE
Confidence 445555667788999999999999998887 8999984
No 342
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=98.66 E-value=1.8e-07 Score=61.77 Aligned_cols=30 Identities=23% Similarity=0.614 Sum_probs=21.0
Q ss_pred EeecCCcEEEEeeeccc-CCC-eeEEEcCCce
Q psy16421 112 GAHEGQQLVLECISEAY-PKS-VNYWTREKGD 141 (151)
Q Consensus 112 ~~~~g~~~~l~C~~~g~-p~~-~~~W~k~~~~ 141 (151)
.+.+|+.+.|.|.+.|. |.+ .++|+|++..
T Consensus 132 ~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~ 163 (227)
T 1mju_H 132 GDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLS 163 (227)
T ss_dssp ------CEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred cccCCCcEEEEEEeecEeCCCeEEEEecCCCc
Confidence 35679999999999985 777 8999998764
No 343
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.65 E-value=6.1e-08 Score=56.79 Aligned_cols=46 Identities=17% Similarity=0.411 Sum_probs=40.1
Q ss_pred CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 99 TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 99 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
..+|.|...+....+.+|+.+.|.|.+.|.|.|.+.|+|++..+..
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~ 51 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISP 51 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCT
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCC
Confidence 4578888888888999999999999999999999999999776654
No 344
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=98.64 E-value=6.6e-08 Score=55.38 Aligned_cols=45 Identities=11% Similarity=0.216 Sum_probs=39.5
Q ss_pred CCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 100 VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 100 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
.+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+|+|..+..
T Consensus 5 ~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~ 49 (99)
T 3puc_A 5 SKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQ 49 (99)
T ss_dssp EEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCS
T ss_pred CCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcC
Confidence 467788888888999999999999999999999999999776644
No 345
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=98.64 E-value=9.1e-08 Score=66.89 Aligned_cols=30 Identities=20% Similarity=0.470 Sum_probs=25.1
Q ss_pred EeecCCcEEEEeeeccc-CC-CeeEEEcCCce
Q psy16421 112 GAHEGQQLVLECISEAY-PK-SVNYWTREKGD 141 (151)
Q Consensus 112 ~~~~g~~~~l~C~~~g~-p~-~~~~W~k~~~~ 141 (151)
.+.+|+.+.|.|.+.|. |. +.++|+|+|..
T Consensus 131 ~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~ 162 (344)
T 1za6_B 131 KSTSGGTAALGCLVKDYFPEPVTVSWNSGALT 162 (344)
T ss_dssp TTTSSSEEEEEEEEEEEBSSCCCEEETTTTBC
T ss_pred cccCCCcEEEEEEEeeEECCCeEEEEecCCcc
Confidence 35689999999999987 64 68999998764
No 346
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=98.64 E-value=4.2e-07 Score=60.98 Aligned_cols=29 Identities=31% Similarity=0.671 Sum_probs=26.2
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEe
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRR 86 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~ 86 (151)
..+.+.+|+++.|.|.+.+.+.+.+.|++
T Consensus 11 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~r 39 (256)
T 3tf7_C 11 ARVTVSEGASLQLRCKYSYSATPYLFWYV 39 (256)
T ss_dssp SEEEEETTSCEEECCEEECSSCCEEEEEE
T ss_pred ceEEecCCCeEEEEEEeCCCCCceEEEEE
Confidence 46788899999999999888999999997
No 347
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=98.64 E-value=5.2e-08 Score=62.86 Aligned_cols=30 Identities=10% Similarity=0.315 Sum_probs=25.9
Q ss_pred ecCCcEEEEeeec-ccCCCeeEEEcCCceec
Q psy16421 114 HEGQQLVLECISE-AYPKSVNYWTREKGDMI 143 (151)
Q Consensus 114 ~~g~~~~l~C~~~-g~p~~~~~W~k~~~~~~ 143 (151)
..|+.+.|.|.+. |.|.|.++|+|+|..+.
T Consensus 119 ~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~ 149 (201)
T 1dr9_A 119 PTSNIRRIICSTSGGFPEPHLSWLENGEELN 149 (201)
T ss_dssp SSTTEEEEEEEEEEESSCEEEEEEESSCEEC
T ss_pred CCCCeEEEEEecCCccCCCEEEEEECCEECc
Confidence 4588999999995 99999999999977664
No 348
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=98.63 E-value=2.1e-07 Score=60.89 Aligned_cols=28 Identities=21% Similarity=0.555 Sum_probs=24.9
Q ss_pred eecCCcEEEEeeeccc-CCC-eeEEEcCCc
Q psy16421 113 AHEGQQLVLECISEAY-PKS-VNYWTREKG 140 (151)
Q Consensus 113 ~~~g~~~~l~C~~~g~-p~~-~~~W~k~~~ 140 (151)
+.+|+.+.|.|.+.|. |.| .++|++++.
T Consensus 137 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 166 (220)
T 1pz5_B 137 DTSGSSVTLGCLVKGYFPEPVTVKWNYGAL 166 (220)
T ss_dssp CSCSSSEEEEEEEEEEBSSCCEEEEGGGTC
T ss_pred cCCCCcEEEEEEEEEEeCCCeEEEEecCCc
Confidence 4679999999999997 888 899999876
No 349
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=98.63 E-value=5.9e-08 Score=56.42 Aligned_cols=47 Identities=19% Similarity=0.356 Sum_probs=40.8
Q ss_pred CCCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 98 NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
...+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+|++..+..
T Consensus 10 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~ 56 (107)
T 3irg_B 10 QGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAA 56 (107)
T ss_dssp CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCC
T ss_pred CCCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCC
Confidence 34578888888888999999999999999999999999999776654
No 350
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=98.63 E-value=8.8e-08 Score=54.71 Aligned_cols=45 Identities=16% Similarity=0.146 Sum_probs=38.3
Q ss_pred CCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 100 VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 100 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
.++.|...+....+.+|+++.|.|.+.+ |++.+.|+|||..+..+
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~ 48 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAAS 48 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCB
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCC
Confidence 4678888888899999999999999987 55789999998776543
No 351
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.63 E-value=5.9e-08 Score=57.45 Aligned_cols=45 Identities=16% Similarity=0.164 Sum_probs=39.2
Q ss_pred CCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 101 PPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 101 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
++.|...+....+.+|+++.|.|.+.|.|.|.+.|+|+|..+..+
T Consensus 13 p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~ 57 (115)
T 2cr6_A 13 RVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHAN 57 (115)
T ss_dssp CCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCS
T ss_pred CCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCC
Confidence 346777788889999999999999999999999999998777554
No 352
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=98.62 E-value=2.7e-07 Score=59.94 Aligned_cols=30 Identities=20% Similarity=0.265 Sum_probs=25.4
Q ss_pred eecCCcEEEEeeeccc----CCCeeEEEcCCcee
Q psy16421 113 AHEGQQLVLECISEAY----PKSVNYWTREKGDM 142 (151)
Q Consensus 113 ~~~g~~~~l~C~~~g~----p~~~~~W~k~~~~~ 142 (151)
+.+|+.+.|.|.+.|. |.|.++|+|++...
T Consensus 135 ~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~~ 168 (214)
T 2zg1_A 135 LESGRPTRLSCSLPGSCEAGPPLTFSWTGNALSP 168 (214)
T ss_dssp CCTTCCEEEEEECTTCCSCSSCCEEEEESSTTSS
T ss_pred ccCCCeEEEEEEeccCCCCCCCceEEEeCCCCcc
Confidence 5689999999999874 88999999987543
No 353
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=98.62 E-value=2.1e-07 Score=62.73 Aligned_cols=28 Identities=29% Similarity=0.620 Sum_probs=24.2
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEe
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRR 86 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~ 86 (151)
..+.+.+|+++.|.|.+. .+.+.+.|++
T Consensus 34 ~~v~v~~G~~v~L~C~~~-~~~~~v~W~r 61 (268)
T 3pl6_D 34 SNKVTEKGKYVELRCDPI-SGHTALYWYR 61 (268)
T ss_dssp SEEEEETTCCEEEEEBCB-TTCCEEEEEE
T ss_pred CEEEecCCCCEEEEEEeC-CCCceEEEEE
Confidence 567788999999999986 4778999998
No 354
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.62 E-value=3.1e-08 Score=65.62 Aligned_cols=86 Identities=17% Similarity=0.256 Sum_probs=50.1
Q ss_pred CccccccCCeEEEEEEEcCC--C-CCCccceEEEEeccccceeEEeecCCCCeeE-eCCCCCceEeecCCeEEEEeeecC
Q psy16421 1 MTEVSREHMGAYLCIASNGV--P-PSVSKRIMLIVQCQYFSKLYIYTSSMPPDIL-DYPTSSDIMVREGSNVSMRCAASG 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~--~-~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~-~~~~~~~~~~~~g~~~~l~C~~~g 76 (151)
|.+++.+|+|.|.|.+.+.. . ........|.|...... +....+|... ..+ ....+.+|+.+.|.|.+.+
T Consensus 83 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~----l~~~~~p~~~v~~p--~~~~v~~g~~~~L~C~~~g 156 (230)
T 1ypz_F 83 IYSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKR----LDADISPKPTIFLP--SVAETNLHKTGTYLCLLEA 156 (230)
T ss_dssp ECSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTT----CCSCCSCCCCEECC--CHHHHHHHSCEEEEEEEEE
T ss_pred ECcCChhhCEEEEEEEECCCCCcccccCCCEEEEEeccccc----CcccCCCCceEECC--CchhhccCCcceEEEEEee
Confidence 67899999999999998851 1 11223446666411000 0000122221 112 2334456889999999987
Q ss_pred C-CC-CeEEEEeCCeeeE
Q psy16421 77 S-PP-PSIMWRREGGEMI 92 (151)
Q Consensus 77 ~-~~-~~~~W~~~~~~~~ 92 (151)
. |. +.+.|++.+++.+
T Consensus 157 ~~P~~~~v~W~~~~g~~l 174 (230)
T 1ypz_F 157 FFPDVIRVYWKEKDGNTI 174 (230)
T ss_dssp ESSCCCEEEEECTTSSCB
T ss_pred ecCCCeEEEEEccCCeEc
Confidence 4 64 6999999555544
No 355
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=98.61 E-value=3.4e-07 Score=60.84 Aligned_cols=29 Identities=28% Similarity=0.741 Sum_probs=26.2
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEe
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRR 86 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~ 86 (151)
..+.+.+|+++.|.|.+.+.+.+.+.|++
T Consensus 9 ~~v~v~~G~~v~L~C~~~~~~~~~v~W~k 37 (245)
T 3nfj_J 9 ATLVQPVGSPLSLECTVEGTSNPNLYWYR 37 (245)
T ss_dssp SEEEEETTCCEEEEEEEESCSSCEEEEEE
T ss_pred ceEEecCCCCEEEEEEecCCCCceEEEEE
Confidence 46778899999999999998999999998
No 356
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=98.61 E-value=7.4e-08 Score=68.43 Aligned_cols=80 Identities=13% Similarity=0.241 Sum_probs=52.1
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCC-C-
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGS-P- 78 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~-~- 78 (151)
|..++.+|+|.|+|.+.+..+. ......+.+. ..+..+|.+...+ ......+|+.+.|.|.+.|. |
T Consensus 237 I~~~~~~D~g~Y~C~~~~~~~~-~~~~~~v~~~---------~~~~~~P~v~v~~--~~~~~~~g~~~~L~C~~~g~~P~ 304 (376)
T 2aty_A 237 IMHQDWLNGKEFKCRVNSAAFP-APIEKTISKT---------KGRPKAPQLYTIP--PPKEQMAKDKVSLTCMITDFFPE 304 (376)
T ss_pred echHhccCCCEEEEEEecCCCC-CceEEEEcCC---------CCCCcCCeEEeeC--CCHHHhcCCceEEEEEEEEeECC
Confidence 3466778999999999988652 2111122111 1334677776655 23334468899999999885 3
Q ss_pred CCeEEEEeCCeeeEe
Q psy16421 79 PPSIMWRREGGEMIT 93 (151)
Q Consensus 79 ~~~~~W~~~~~~~~~ 93 (151)
.+.+.|++ +++.+.
T Consensus 305 ~i~v~W~k-~g~~~~ 318 (376)
T 2aty_A 305 DITVEWQW-NGQPAE 318 (376)
T ss_pred CcEEEEEE-CCEECC
Confidence 45899999 666553
No 357
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=98.60 E-value=3.1e-08 Score=66.02 Aligned_cols=78 Identities=17% Similarity=0.407 Sum_probs=47.0
Q ss_pred CccccccCCeEEEEEEEcCCCC------------CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeE
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP------------SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNV 68 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~------------~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~ 68 (151)
|.+++.+|+|.|.|.+.+..+. .......|.|.. ....+|.+...+ ....+..|+.+
T Consensus 90 I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~---------~~~~~P~v~~~~--~~~~~~~g~~v 158 (239)
T 3tv3_H 90 LNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSS---------ASTKGPSVFPLA--PSSKSTSGGTA 158 (239)
T ss_dssp ECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECC---------CCCBCCEEEEEC--CCCCC--TTEE
T ss_pred ECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeecc---------CCCcCCEEEEEC--CChhhccCCcE
Confidence 5789999999999999875320 112233444431 112345554322 12334569999
Q ss_pred EEEeeecC-CCCC-eEEEEeCCee
Q psy16421 69 SMRCAASG-SPPP-SIMWRREGGE 90 (151)
Q Consensus 69 ~l~C~~~g-~~~~-~~~W~~~~~~ 90 (151)
.|.|.+.+ .|.+ .+.|++ +++
T Consensus 159 ~l~C~~~~~~p~~~~v~W~~-~g~ 181 (239)
T 3tv3_H 159 ALGCLVKDYFPEPVTVSWNS-GAL 181 (239)
T ss_dssp EEEEEEEEEBSSCCEEEEGG-GTB
T ss_pred EEEEEEeeEeCCCeEEEEEE-CCc
Confidence 99999877 4544 478998 443
No 358
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.60 E-value=5.8e-08 Score=55.29 Aligned_cols=47 Identities=13% Similarity=0.299 Sum_probs=35.6
Q ss_pred CCCCeeeeCCce--eEeecCCcEEEEeeecccCCCeeEEEcCCceeccCC
Q psy16421 99 TVPPIVKIPSQL--IGAHEGQQLVLECISEAYPKSVNYWTREKGDMIANG 146 (151)
Q Consensus 99 ~~~p~~~~~~~~--~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~~ 146 (151)
..|+.|..+... +.+.+|+++.|.|.+.+ |.|.+.|+|||..+..+.
T Consensus 2 ~~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~ 50 (91)
T 2lvc_A 2 HMPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESD 50 (91)
T ss_dssp CCCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCS
T ss_pred CCCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeee
Confidence 356667666544 34578999999999966 888999999988776543
No 359
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.59 E-value=7.4e-08 Score=57.19 Aligned_cols=47 Identities=23% Similarity=0.379 Sum_probs=41.3
Q ss_pred CCCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 98 NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
...+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+|++..+..
T Consensus 12 ~~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~ 58 (116)
T 2kkq_A 12 HKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQF 58 (116)
T ss_dssp CCBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCC
T ss_pred CCCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcC
Confidence 35678888888889999999999999999999999999999776653
No 360
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.59 E-value=7.5e-08 Score=57.14 Aligned_cols=46 Identities=15% Similarity=0.341 Sum_probs=40.2
Q ss_pred CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 99 TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 99 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
..+|.|...+....+.+|+++.|.|.+.|.|.+.+.|+|+|..+..
T Consensus 6 ~~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~ 51 (118)
T 2eo9_A 6 SGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVST 51 (118)
T ss_dssp CCSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCT
T ss_pred CCCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcC
Confidence 4578888888888999999999999999999999999999776643
No 361
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=98.59 E-value=8.8e-07 Score=59.32 Aligned_cols=34 Identities=12% Similarity=0.262 Sum_probs=28.4
Q ss_pred eeeCCceeEeecCCcEEEEeeecccCC-CeeEEEc
Q psy16421 104 VKIPSQLIGAHEGQQLVLECISEAYPK-SVNYWTR 137 (151)
Q Consensus 104 ~~~~~~~~~~~~g~~~~l~C~~~g~p~-~~~~W~k 137 (151)
+...+....+.+|+++.|.|.+.+.|. +.+.|+|
T Consensus 152 ~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k 186 (256)
T 3juy_B 152 LTQAPGTLSLSPGERATFSCRSSHSIRSRRVAWYQ 186 (256)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCTTCCEEEEE
T ss_pred EEecCCeEEEeCCCCEEEEEEECCCcCCeeEEEEE
Confidence 344456677899999999999999886 8899998
No 362
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.58 E-value=5.5e-08 Score=56.90 Aligned_cols=47 Identities=13% Similarity=0.238 Sum_probs=41.3
Q ss_pred CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 99 TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 99 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
..+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+|++..+...
T Consensus 7 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~ 53 (110)
T 2dm3_A 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPD 53 (110)
T ss_dssp CCCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCC
T ss_pred CCCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCC
Confidence 45788988888899999999999999999999999999998766543
No 363
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=98.58 E-value=1.4e-07 Score=54.61 Aligned_cols=74 Identities=26% Similarity=0.465 Sum_probs=49.9
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCC-------CCCeeeeCCceeEeecCCcE
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNT-------VPPIVKIPSQLIGAHEGQQL 119 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~-------~~p~~~~~~~~~~~~~g~~~ 119 (151)
.||.|...+ .++.+.+|+.+.|.|.+.|.|.|.+.|++ +++.+....... ..-.+.+. .+...+..
T Consensus 4 ~PP~i~~~p--~~~~v~~G~~~~l~C~~~g~P~p~v~W~k-~g~~i~~~~~~~~~~~~~~~~~~L~I~----~~~~~D~G 76 (100)
T 3knb_A 4 IPPKIEALP--SDISIDEGKVLTVACAFTGEPTPEVTWSC-GGRKIHSQEQGRFHIENTDDLTTLIIM----DVQKQDGG 76 (100)
T ss_dssp EEEEECCCC--SEEEEETTSEEEEEEEEEEESCCEEEEEE-TTEECCTTGGGTEEEEECSSEEEEEES----SCCGGGCE
T ss_pred CCCEEEeCC--CcEEEeCCCeEEEEEEEEEecCCEEEEEE-CceEeeeeccceeeeecccceEEEEEc----CCCccCCE
Confidence 356666655 67889999999999999999999999999 666665322100 00011111 13456778
Q ss_pred EEEeeecc
Q psy16421 120 VLECISEA 127 (151)
Q Consensus 120 ~l~C~~~g 127 (151)
...|.+..
T Consensus 77 ~Y~C~a~N 84 (100)
T 3knb_A 77 LYTLSLGN 84 (100)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 89998863
No 364
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.58 E-value=1.3e-07 Score=62.39 Aligned_cols=30 Identities=20% Similarity=0.461 Sum_probs=24.2
Q ss_pred CceEeecCCeEEEEeeecCCC-CC-eEEEEeC
Q psy16421 58 SDIMVREGSNVSMRCAASGSP-PP-SIMWRRE 87 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~-~~-~~~W~~~ 87 (151)
..+.+.+|+++.|.|.+.+.+ .+ .+.|++.
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~ 58 (234)
T 2j6e_L 27 PSASGTPGQRVTISCSGSSSNIGSNYVYWYQQ 58 (234)
T ss_dssp SCCCBCTTCEEEEEEECCTTTTTTSCCEEEEE
T ss_pred CcEEeeCCCcEEEEEEecCCCCCCCeEEEEEe
Confidence 456788999999999998754 34 6999984
No 365
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=98.57 E-value=4.3e-07 Score=58.50 Aligned_cols=30 Identities=13% Similarity=0.070 Sum_probs=24.4
Q ss_pred CceEeecCCeEEEEeeecC-CCCCeEEEEeC
Q psy16421 58 SDIMVREGSNVSMRCAASG-SPPPSIMWRRE 87 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g-~~~~~~~W~~~ 87 (151)
..+.+.+|+++.|.|.+.+ .+.+.+.|++.
T Consensus 6 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~ 36 (193)
T 2if7_A 6 LMVNGILGESVTLPLEFPAGEKVNFITWLFN 36 (193)
T ss_dssp EEEEEETTSCEEECCCCCCCSCCCEEEEEET
T ss_pred eEEEEEecCeEEEeccCCCcccccEEEEEEC
Confidence 4567789999999999865 45578999994
No 366
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=98.57 E-value=7.8e-07 Score=59.16 Aligned_cols=30 Identities=20% Similarity=0.339 Sum_probs=25.8
Q ss_pred CceEeecCCeEEEEeeecCCC-----CCeEEEEeC
Q psy16421 58 SDIMVREGSNVSMRCAASGSP-----PPSIMWRRE 87 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~-----~~~~~W~~~ 87 (151)
..+.+.+|+++.|.|.+.+.+ .+.+.|++.
T Consensus 9 ~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~ 43 (247)
T 1svz_A 9 LYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQ 43 (247)
T ss_dssp SEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEE
T ss_pred CeEEecCCCCEEEEEeCCCcccccCCCceEEEEEE
Confidence 457788999999999998877 689999983
No 367
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=98.57 E-value=9.3e-07 Score=59.21 Aligned_cols=38 Identities=13% Similarity=0.221 Sum_probs=31.5
Q ss_pred CCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcC
Q psy16421 101 PPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTRE 138 (151)
Q Consensus 101 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~ 138 (151)
++.+...+....+.+|+++.|.|.+.+.|.+.+.|+|+
T Consensus 138 ~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 175 (256)
T 3umt_A 138 DIQLTQSPSSLSASLGERVSITCRASQDIGSNLNWLQQ 175 (256)
T ss_dssp CCCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEE
T ss_pred ccEEEcCCCeEEEECCCCEEEEEEEecCCCcEEEEEEE
Confidence 44455556667889999999999999999899999984
No 368
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=98.57 E-value=3.5e-07 Score=59.90 Aligned_cols=29 Identities=21% Similarity=0.528 Sum_probs=24.9
Q ss_pred eecCCcEEEEeeeccc-CCC-eeEEEcCCce
Q psy16421 113 AHEGQQLVLECISEAY-PKS-VNYWTREKGD 141 (151)
Q Consensus 113 ~~~g~~~~l~C~~~g~-p~~-~~~W~k~~~~ 141 (151)
+.+|+.+.|.|.+.|. |.| .++|+++|..
T Consensus 139 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~ 169 (222)
T 1q9r_B 139 AQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 169 (222)
T ss_dssp CCCSSEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred ccCCCcEEEEEEEccEECCCCEEEEecCCeE
Confidence 4579999999999985 888 8999998754
No 369
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=98.57 E-value=6.8e-08 Score=64.83 Aligned_cols=76 Identities=18% Similarity=0.417 Sum_probs=44.4
Q ss_pred CccccccCCeEEEEEEEcCC---------------------CCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCc
Q psy16421 1 MTEVSREHMGAYLCIASNGV---------------------PPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSD 59 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~---------------------~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~ 59 (151)
|.+++.+|+|.|.|.+.+.. .........|.|.. ....+|.+...+ ..
T Consensus 82 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~---------~~~~~P~v~~~~--~~ 150 (248)
T 3u2s_H 82 MNSLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSS---------ASTKGPSVFPLA--PS 150 (248)
T ss_dssp ECSCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECS---------CCCBCCEEEEEC--CC
T ss_pred ECCCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcc---------cCCCCCEEEEeC--CC
Confidence 57899999999999998741 00122334555531 112345554322 12
Q ss_pred eEeecCCeEEEEeeecC-CC-CCeEEEEeC
Q psy16421 60 IMVREGSNVSMRCAASG-SP-PPSIMWRRE 87 (151)
Q Consensus 60 ~~~~~g~~~~l~C~~~g-~~-~~~~~W~~~ 87 (151)
..+..|+.+.|.|.+.+ .| ...+.|+++
T Consensus 151 ~~~~~g~~~~L~C~~~~~~P~~~~v~W~~~ 180 (248)
T 3u2s_H 151 SKSTSGGTAALGCLVKDYFPEPVTVSWNSG 180 (248)
T ss_dssp ------CEEEEEEEEEEEBSSCCEEEEGGG
T ss_pred ccccCCCcEEEEEEEeeEECCCeEEEEeEC
Confidence 33456899999999877 45 457899984
No 370
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.57 E-value=4.8e-08 Score=56.42 Aligned_cols=46 Identities=9% Similarity=0.174 Sum_probs=39.5
Q ss_pred CCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccCC
Q psy16421 100 VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIANG 146 (151)
Q Consensus 100 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~~ 146 (151)
.||.|...+....+.+|+++.|.|.+.+.| +.+.|+|||..+..+.
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~ 52 (101)
T 2edk_A 7 GPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTRED 52 (101)
T ss_dssp CCCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSC
T ss_pred CCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCC
Confidence 467788888888999999999999999998 9999999987776544
No 371
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=98.56 E-value=2.7e-07 Score=59.84 Aligned_cols=109 Identities=17% Similarity=0.291 Sum_probs=62.2
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~~ 79 (151)
|.+++ +|.+.|.|.+.... ......+.|.|.. .|-.+...+ ....+.+|+.+.|.|.+.+ .|.
T Consensus 56 ls~vs-~d~~~~~C~~~c~~-~~~~~~v~l~Vy~------------~P~~v~i~~--~~~~~~~G~~~tL~C~v~~~~P~ 119 (196)
T 3bn3_B 56 LVDIR-EPETQPVCFFRCAR-RTLQARGLIRTFQ------------RPDRVELMP--LPPWQPVGENFTLSCRVPGAGPR 119 (196)
T ss_dssp EEEEC-SSEECCEEEEEETT-EEEEEECEEEEEB------------CCCCCEECC--CCSSEETTSEEEEEEEETTCBCG
T ss_pred EEEEc-cCCCceEEEEECCC-CceEEEEEEEEec------------CCCcCEEcc--CCccccCCCcEEEEEEeCCccCC
Confidence 35677 78888999976643 3566677777751 122222222 1223678999999999877 444
Q ss_pred Ce--EEEEeCCeeeEecccCCCCCCe---eeeCCceeEeecCCcEEEEeeec
Q psy16421 80 PS--IMWRREGGEMITNSFNNTVPPI---VKIPSQLIGAHEGQQLVLECISE 126 (151)
Q Consensus 80 ~~--~~W~~~~~~~~~~~~~~~~~p~---~~~~~~~~~~~~g~~~~l~C~~~ 126 (151)
.. +.|++ |++.+........... ...........+.+-..++|.|.
T Consensus 120 ~~L~i~wlk-g~~~l~~~~~~~~~~~~~~~t~~~~~~~~r~D~g~~~sC~A~ 170 (196)
T 3bn3_B 120 ASLTLTLLR-GAQELIRRSFAGEPPRARGAVLTATVLARREDHGANFSCRAE 170 (196)
T ss_dssp GGEEEEEEE-TTEEEEEEECTTSCTTCCCEEEEEEEECCGGGTTCEEEEEEE
T ss_pred CCcEEEEEe-CCEEeeccccccccccccceeEEEEEeeeeccCCCeEEEEEE
Confidence 33 79999 6666643221111100 11111111123566679999986
No 372
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=98.56 E-value=8.5e-08 Score=56.21 Aligned_cols=74 Identities=26% Similarity=0.591 Sum_probs=52.1
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCCCC-----CeeeeCCceeEeecCCcEEE
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVP-----PIVKIPSQLIGAHEGQQLVL 121 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~~~-----p~~~~~~~~~~~~~g~~~~l 121 (151)
.||.|...+ .++.+.+|+.+.|.|.+.|.|.|.+.|++ +++.+....+.... -.+.+. .+...+....
T Consensus 12 ~pP~f~~~p--~~~~v~~G~~~~l~C~~~G~P~p~v~W~k-~g~~l~~~~~~~~~~~~~~~~L~I~----~v~~~D~G~Y 84 (107)
T 3knb_B 12 SPPCFLRFP--RPVRVVSGAEAELKCVVLGEPPPVVVWEK-GGQQLAASERLSFPADGAEHGLLLT----AALPTDAGVY 84 (107)
T ss_dssp EEEEEEECC--CCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCCSSEECCEETTEEEEEES----SCCGGGCEEE
T ss_pred CCCEEEeCC--CcEEEeCCCcEEEEEEEEEecCCEEEEEE-CcccccceeeEEEeecCceEEEEEe----cCChhhCEEE
Confidence 578888877 67899999999999999999999999999 66666543321100 012221 2345677888
Q ss_pred Eeeecc
Q psy16421 122 ECISEA 127 (151)
Q Consensus 122 ~C~~~g 127 (151)
.|.+..
T Consensus 85 ~C~a~N 90 (107)
T 3knb_B 85 VCRARN 90 (107)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998763
No 373
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=98.56 E-value=4.5e-08 Score=69.17 Aligned_cols=56 Identities=21% Similarity=0.224 Sum_probs=27.0
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPP 80 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~ 80 (151)
|.+++.+|+|.|+|.|.|..| ..+..+.|.|. ..+ .+|+.+.|.|.+.|.|.|
T Consensus 305 I~~v~~~D~G~Y~C~a~N~~g-~~~~~~~l~V~-------------~~~-------------~~g~~~~l~C~~~g~P~P 357 (361)
T 2xot_A 305 FKKVQVEDGGVYTCYAMGETF-NETLSVELKVY-------------NFT-------------LHGHHDTLNAAADPWSHP 357 (361)
T ss_dssp ESSCCTTSCEEEEEEEECSSC-EEEEEEEEEEE-------------SSC-------------CC----------------
T ss_pred EeecCcccCEEEEEEEecCCC-ccEEEEEEEEE-------------eee-------------ccCCceEEEEEeCCCCCC
Confidence 578999999999999999977 55566666653 111 357789999999999988
Q ss_pred eEE
Q psy16421 81 SIM 83 (151)
Q Consensus 81 ~~~ 83 (151)
.+.
T Consensus 358 ~i~ 360 (361)
T 2xot_A 358 QFE 360 (361)
T ss_dssp ---
T ss_pred ccc
Confidence 763
No 374
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=98.55 E-value=4.1e-07 Score=59.00 Aligned_cols=33 Identities=21% Similarity=0.503 Sum_probs=25.4
Q ss_pred ceEeecCCeEEEEeeecCCCCCe---EEEEeCCeee
Q psy16421 59 DIMVREGSNVSMRCAASGSPPPS---IMWRREGGEM 91 (151)
Q Consensus 59 ~~~~~~g~~~~l~C~~~g~~~~~---~~W~~~~~~~ 91 (151)
.+.+..|+++.|.|.+.+.+.+. +.|+|.++..
T Consensus 10 ~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~ 45 (225)
T 4fmk_A 10 EVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTV 45 (225)
T ss_dssp EEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCE
T ss_pred EEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcc
Confidence 35667899999999998877663 7899965443
No 375
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=98.55 E-value=1.1e-07 Score=63.88 Aligned_cols=32 Identities=13% Similarity=0.211 Sum_probs=27.4
Q ss_pred CceeEeecCCcEEEEeee---cccCCCeeEEEcCC
Q psy16421 108 SQLIGAHEGQQLVLECIS---EAYPKSVNYWTREK 139 (151)
Q Consensus 108 ~~~~~~~~g~~~~l~C~~---~g~p~~~~~W~k~~ 139 (151)
+....+.+|+++.|.|.+ .+.|.+.+.|+|++
T Consensus 125 p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~ 159 (268)
T 3mj6_A 125 PRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSS 159 (268)
T ss_dssp CSEEEEETTCCEEECCBCEESSSSCCCEEEEEEEC
T ss_pred CCccccccCCcEEEEEEecCCCCCCccceEEEecC
Confidence 456778999999999999 67799999999953
No 376
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=98.55 E-value=1.5e-07 Score=58.61 Aligned_cols=47 Identities=19% Similarity=0.373 Sum_probs=41.2
Q ss_pred CCCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 98 NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 98 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+..+|.|...+....+..|+++.|.|.+.|.|.|.+.|+|++..+..
T Consensus 38 v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~ 84 (154)
T 1fhg_A 38 PHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKE 84 (154)
T ss_dssp CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCC
T ss_pred CCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCC
Confidence 45678888888888999999999999999999999999999876644
No 377
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=98.54 E-value=3.1e-07 Score=60.08 Aligned_cols=29 Identities=17% Similarity=0.486 Sum_probs=24.9
Q ss_pred eecCCcEEEEeeeccc-CCC-eeEEEcCCce
Q psy16421 113 AHEGQQLVLECISEAY-PKS-VNYWTREKGD 141 (151)
Q Consensus 113 ~~~g~~~~l~C~~~g~-p~~-~~~W~k~~~~ 141 (151)
+.+|+.+.|.|.+.|. |.| .++|+++|..
T Consensus 134 ~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~ 164 (215)
T 1c5d_H 134 DTTSSTVTLGCLVKGYFPEPVTVTWNSGALS 164 (215)
T ss_dssp CCCCSSEEEEEEEEEEBSSCCEEEEGGGTTC
T ss_pred hccCCcEEEEEEEeeeEcCCcEEEEccCCcc
Confidence 3579999999999986 888 8999998764
No 378
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.54 E-value=8.1e-08 Score=55.92 Aligned_cols=46 Identities=13% Similarity=0.353 Sum_probs=34.3
Q ss_pred CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 99 TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 99 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
..+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+|++..+..
T Consensus 8 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~ 53 (108)
T 3kvq_A 8 RVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVE 53 (108)
T ss_dssp ---CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCC
T ss_pred cCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEccc
Confidence 4577888778888899999999999999999999999999876643
No 379
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=98.53 E-value=6.3e-08 Score=56.56 Aligned_cols=46 Identities=15% Similarity=0.290 Sum_probs=40.7
Q ss_pred CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 99 TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 99 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
..+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+|+|..+..
T Consensus 12 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~ 57 (106)
T 1nct_A 12 TLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLST 57 (106)
T ss_dssp SCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTT
T ss_pred CCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCC
Confidence 4578888888899999999999999999999999999999776543
No 380
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=98.53 E-value=1.1e-06 Score=58.84 Aligned_cols=37 Identities=19% Similarity=0.478 Sum_probs=30.1
Q ss_pred CeeeeCCceeEeecCCcEEEEeeecccCCC-eeEEEcC
Q psy16421 102 PIVKIPSQLIGAHEGQQLVLECISEAYPKS-VNYWTRE 138 (151)
Q Consensus 102 p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~~~W~k~ 138 (151)
+.+...+....+.+|+++.|.|.+.+.|.+ .+.|+|+
T Consensus 142 ~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~ 179 (257)
T 3gkz_A 142 IVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWYQQ 179 (257)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCCGGGEEEEEE
T ss_pred eEEEcCCceEEEeCCCcEEEEEEEccCccceEEEEEEE
Confidence 344445566788999999999999998887 8999983
No 381
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=98.52 E-value=2e-07 Score=61.60 Aligned_cols=73 Identities=16% Similarity=0.411 Sum_probs=45.9
Q ss_pred CccccccCCeEEEEEEEcCCC-----C--CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEee
Q psy16421 1 MTEVSREHMGAYLCIASNGVP-----P--SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCA 73 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~-----~--~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~ 73 (151)
|.+++.+|+|.|.|.+.+..+ . .......|.|.. ....+|.+.... ....+.+|+.+.|.|.
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~---------~~~~~P~v~~~~--~~~~~~~g~~v~L~C~ 151 (230)
T 3n9g_H 83 LSSLRSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSS---------ASTKGPSVFPLA--PSSKSTSGGTAALGCL 151 (230)
T ss_dssp ECSCCGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECS---------SCCBCCEEEEEC--CCCCCCTTCEEEEEEE
T ss_pred ECCCChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEe---------cCCCCCEEEecC--CCccccCCCCEEEEEE
Confidence 578999999999999987541 0 122334555531 112345554322 1223457999999999
Q ss_pred ecC-CC-CCeEEE
Q psy16421 74 ASG-SP-PPSIMW 84 (151)
Q Consensus 74 ~~g-~~-~~~~~W 84 (151)
+.+ .| .+.+.|
T Consensus 152 ~~~~~P~~~~v~W 164 (230)
T 3n9g_H 152 VKDYFPEPVTVSW 164 (230)
T ss_dssp EEEEBSSCCEEEE
T ss_pred EEeEECCCEEEEE
Confidence 877 44 456899
No 382
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.51 E-value=1e-07 Score=55.24 Aligned_cols=45 Identities=18% Similarity=0.241 Sum_probs=37.1
Q ss_pred CCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccCC
Q psy16421 101 PPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIANG 146 (151)
Q Consensus 101 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~~ 146 (151)
|+.|...+....+.+|+++.|.|.+.+ |.+.+.|+|+|..+..+.
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~ 51 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGP 51 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCST
T ss_pred CceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCC
Confidence 344777777889999999999999988 779999999987765544
No 383
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=98.49 E-value=5.1e-07 Score=60.61 Aligned_cols=29 Identities=21% Similarity=0.434 Sum_probs=25.7
Q ss_pred ceeEeecCCcEEEEeeecccCCCeeEEEc
Q psy16421 109 QLIGAHEGQQLVLECISEAYPKSVNYWTR 137 (151)
Q Consensus 109 ~~~~~~~g~~~~l~C~~~g~p~~~~~W~k 137 (151)
....+.+|+++.|.|.+.+.|.+.+.|+|
T Consensus 147 ~~~~v~~G~~v~L~C~~~~~~~~~v~W~k 175 (257)
T 1f3r_B 147 SLLSASVGDRVTLSCKGSQNINNYLAWYQ 175 (257)
T ss_dssp SEECCCTTCCEEEEEECSSCCBTCEEEEE
T ss_pred CEEEEcCCCCEEEEEEECCcCCCcEEEEE
Confidence 34567899999999999999989999999
No 384
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=98.49 E-value=9.8e-07 Score=59.62 Aligned_cols=30 Identities=30% Similarity=0.597 Sum_probs=25.0
Q ss_pred CceEeecCCeEEEEeeecCCC--CCeEEEEeC
Q psy16421 58 SDIMVREGSNVSMRCAASGSP--PPSIMWRRE 87 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~--~~~~~W~~~ 87 (151)
..+.+.+|+++.|.|.+.+.+ .+.+.|++.
T Consensus 14 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 45 (261)
T 2xqy_G 14 GAELVKPGASVKMSCKASGYSFTSYWMNWVKQ 45 (261)
T ss_dssp SEEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred CCEEEcCCCCEEEEEEeCCcccCCceEEEEEe
Confidence 356778899999999998866 688999984
No 385
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.49 E-value=2.8e-07 Score=54.50 Aligned_cols=44 Identities=9% Similarity=0.081 Sum_probs=38.3
Q ss_pred CCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccCC
Q psy16421 101 PPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIANG 146 (151)
Q Consensus 101 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~~ 146 (151)
++.|...+....+.+|+++.|.|.+.+ .|.+.|+|||..+..+.
T Consensus 8 ~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~ 51 (112)
T 2e6q_A 8 TARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNE 51 (112)
T ss_dssp CCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSC
T ss_pred CcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCc
Confidence 467888888999999999999999998 77899999988886654
No 386
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=98.49 E-value=1.9e-07 Score=66.68 Aligned_cols=71 Identities=21% Similarity=0.343 Sum_probs=49.0
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceE-eecCC-eEEEEeeecC-C
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIM-VREGS-NVSMRCAASG-S 77 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~g~-~~~l~C~~~g-~ 77 (151)
|.+++.+|+|.|.|.+.+..+ .....+.|.|. .+|.+...+ .... +..|+ .+.|.|.+.+ .
T Consensus 258 I~~v~~~D~G~Y~C~v~~~~~-~~~~~v~L~V~-------------~pP~V~v~p--~~~~~~~~G~~~vtL~C~a~Gfy 321 (401)
T 3f8u_B 258 LPRVQPFQEGTYLATIHLPYL-QGQVTLELAVY-------------KPPKVSLMP--ATLARAAPGEAPPELLCLVSHFY 321 (401)
T ss_dssp ETTCCGGGCEEEEEEEEETTE-EEEEEEEEEEE-------------BCCEEEEES--SSCCCCCTTCCCCCEEEEEEEEB
T ss_pred ECcCCHhhCceEEEEEEeccc-ceeEEEEEeec-------------cCCeEeecc--CcceeecCCCccEEEEEEecCCc
Confidence 578999999999999998765 33334444443 567766544 2222 34576 7999999988 4
Q ss_pred CC--CeEEEE-eC
Q psy16421 78 PP--PSIMWR-RE 87 (151)
Q Consensus 78 ~~--~~~~W~-~~ 87 (151)
|. +.+.|+ ++
T Consensus 322 P~~~~~VtW~~rd 334 (401)
T 3f8u_B 322 PSGGLEVEWELRG 334 (401)
T ss_dssp SSTTCEEEEEEES
T ss_pred CCCCcEEEEEecC
Confidence 55 789995 73
No 387
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.49 E-value=1.1e-07 Score=55.33 Aligned_cols=46 Identities=11% Similarity=0.115 Sum_probs=39.6
Q ss_pred CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 99 TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 99 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
..+|.|...+....+.+|+++.|.|.+.+.|.+ +.|+|+|..+..+
T Consensus 6 ~~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~ 51 (106)
T 2dlt_A 6 SGQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPS 51 (106)
T ss_dssp CCCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCC
T ss_pred CCCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCC
Confidence 357888888888999999999999999998887 9999998766543
No 388
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=98.48 E-value=1.7e-07 Score=57.08 Aligned_cols=45 Identities=13% Similarity=0.031 Sum_probs=38.5
Q ss_pred CCCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCcee
Q psy16421 98 NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDM 142 (151)
Q Consensus 98 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~ 142 (151)
...+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+|++..+
T Consensus 18 ~~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~ 62 (137)
T 3qr2_A 18 GSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGP 62 (137)
T ss_dssp ---CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESST
T ss_pred CCCCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCc
Confidence 457899999999999999999999999999999999999976543
No 389
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=98.48 E-value=1.4e-07 Score=53.82 Aligned_cols=44 Identities=20% Similarity=0.286 Sum_probs=37.0
Q ss_pred CCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 100 VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 100 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
.+|.|...+....+.+|+++.|.|.+.|.| |.+.|+|+|..+..
T Consensus 8 ~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~ 51 (95)
T 2ckn_A 8 QPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVE 51 (95)
T ss_dssp CSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCC
T ss_pred CCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCC
Confidence 456777777788899999999999999998 79999998776654
No 390
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.48 E-value=1.5e-07 Score=52.77 Aligned_cols=36 Identities=14% Similarity=0.258 Sum_probs=30.7
Q ss_pred ceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 109 QLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 109 ~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
..+.+.+|+++.|.|.+.+ |.|.+.|+|||..+..+
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~ 39 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQ 39 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCC
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEECCEEcccc
Confidence 4567899999999999976 88999999998777554
No 391
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=98.48 E-value=2.1e-07 Score=53.76 Aligned_cols=44 Identities=14% Similarity=0.207 Sum_probs=38.2
Q ss_pred CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceec
Q psy16421 99 TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMI 143 (151)
Q Consensus 99 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~ 143 (151)
..+|.|...+....+.+|+++.|.|.+.+.|.+ +.|+|++..+.
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~ 49 (103)
T 2e7b_A 6 SGPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLR 49 (103)
T ss_dssp CCCCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCC
T ss_pred CCCCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECC
Confidence 457778777888899999999999999999999 99999877654
No 392
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.47 E-value=1.3e-06 Score=56.35 Aligned_cols=108 Identities=14% Similarity=0.177 Sum_probs=62.6
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~~ 79 (151)
|.+|+ |+|.|.|.+..... .....+.|+|. .....+.+... ...+.+|+.++|.|.+.+ .|.
T Consensus 56 l~~vs--~~g~~~C~~~c~~~-~~~~~~~itVy----------~~P~~v~i~~~----p~~~~~G~~~tL~C~v~~v~P~ 118 (192)
T 1zxq_A 56 VSNIS--HDTVLQCHFTCSGK-QESMNSNVSVY----------QPPRQVILTLQ----PTLVAVGKSFTIECRVPTVEPL 118 (192)
T ss_dssp EEEEC--SCEEEEEEEEETTE-EEEEEEEEEEC----------BCCCCCEEEEE----SSEECTTSEEEEEEEECSCBCG
T ss_pred Eeccc--cCCeeEEEEECCCc-ceEEEEEEEEE----------eCCCCceEccC----CccccCCCcEEEEEEeCCeECC
Confidence 34666 78999999987543 45566677664 22223333321 225678999999999865 664
Q ss_pred C--eEEEEeCCeeeEecccC---CCCCCeeeeCCceeEeecCCcEEEEeeec
Q psy16421 80 P--SIMWRREGGEMITNSFN---NTVPPIVKIPSQLIGAHEGQQLVLECISE 126 (151)
Q Consensus 80 ~--~~~W~~~~~~~~~~~~~---~~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 126 (151)
. ++.|++ |.+.+..... ...+...........-.+.+-..++|.|.
T Consensus 119 ~~L~v~llr-G~~~l~~~~f~~~~~~~~~~tv~~~~~~~r~D~g~~~sC~A~ 169 (192)
T 1zxq_A 119 DSLTLFLFR-GNETLHYETFGKAAPAPQEATATFNSTADREDGHRNFSCLAV 169 (192)
T ss_dssp GGEEEEEEE-TTEEEEEEECCSSTTCTTCEEEEEEEECCGGGGGCEEEEEEE
T ss_pred CCcEEEEEc-CCEEeeecccccccCcCcceEEEEEEecchhhCCceEEEEEE
Confidence 4 479999 6666653211 11111222211111123466679999975
No 393
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.47 E-value=1.6e-07 Score=54.25 Aligned_cols=44 Identities=14% Similarity=0.176 Sum_probs=38.0
Q ss_pred CCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 100 VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 100 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
.+|.|...+....+.+|+++.|.|.+ .|.|.+.|+|||..+..+
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~ 49 (100)
T 2yuz_A 6 SGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQES 49 (100)
T ss_dssp CCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCC
T ss_pred CCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCC
Confidence 46778888888899999999999999 789999999998776543
No 394
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=98.47 E-value=1.7e-06 Score=57.77 Aligned_cols=29 Identities=21% Similarity=0.499 Sum_probs=24.8
Q ss_pred ceEeecCCeEEEEeeecCC--CCCeEEEEeC
Q psy16421 59 DIMVREGSNVSMRCAASGS--PPPSIMWRRE 87 (151)
Q Consensus 59 ~~~~~~g~~~~l~C~~~g~--~~~~~~W~~~ 87 (151)
.+.+.+|+++.|.|.+.+. +.+.+.|++.
T Consensus 11 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 41 (256)
T 3ux9_B 11 SVSGAPGQRVTISCSGSSSNIGSNYVSWYQQ 41 (256)
T ss_dssp EEEECTTCCEEEEEECCTTTTTTSCCEEEEE
T ss_pred cEEEcCCCcEEEEEecCCCCCCCceEEEEEE
Confidence 4677889999999999886 7889999983
No 395
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=98.46 E-value=1.1e-06 Score=57.71 Aligned_cols=30 Identities=20% Similarity=0.557 Sum_probs=24.9
Q ss_pred eecCCcEEEEeeeccc-CC--CeeEEEcCCcee
Q psy16421 113 AHEGQQLVLECISEAY-PK--SVNYWTREKGDM 142 (151)
Q Consensus 113 ~~~g~~~~l~C~~~g~-p~--~~~~W~k~~~~~ 142 (151)
+..|+.+.|.|.+.|. |. +.++|++++..+
T Consensus 134 ~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~ 166 (220)
T 2fbj_H 134 ALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDI 166 (220)
T ss_dssp SSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSC
T ss_pred ccCCCcEEEEEEEEeEECCCcEEEEEecCCEec
Confidence 4579999999999986 76 689999987653
No 396
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=98.46 E-value=7.4e-07 Score=66.37 Aligned_cols=30 Identities=23% Similarity=0.692 Sum_probs=26.0
Q ss_pred CceEeecCCeEEEEeee-cCCCCCeEEEEeC
Q psy16421 58 SDIMVREGSNVSMRCAA-SGSPPPSIMWRRE 87 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~-~g~~~~~~~W~~~ 87 (151)
....+.+|++++|.|.+ .+.|.+.+.|++.
T Consensus 374 ~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~ 404 (581)
T 3o3u_N 374 QNITARIGEPLVLKCKGAPKKPPQRLEWKLN 404 (581)
T ss_dssp EEEEEETTSCEEECCTTCCSSSSCEEEEEEE
T ss_pred cccceecCCcEEEeeeecCCCCCceEEEEEc
Confidence 34677899999999998 7889999999994
No 397
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=98.46 E-value=8.4e-07 Score=56.17 Aligned_cols=30 Identities=17% Similarity=0.389 Sum_probs=24.5
Q ss_pred ceEeecCCeEEEEeeecCCCCCeEEEEeCCe
Q psy16421 59 DIMVREGSNVSMRCAASGSPPPSIMWRREGG 89 (151)
Q Consensus 59 ~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~ 89 (151)
.+.+.+|+++.|.|.+.+ +.+.+.|++.+.
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~ 33 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKD 33 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTE
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCc
Confidence 456778999999999855 888999999543
No 398
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=98.46 E-value=3.8e-07 Score=61.26 Aligned_cols=73 Identities=18% Similarity=0.426 Sum_probs=43.7
Q ss_pred CccccccCCeEEEEEEEcCCC---------C-CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEE
Q psy16421 1 MTEVSREHMGAYLCIASNGVP---------P-SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSM 70 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~---------~-~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l 70 (151)
|.+++.+|+|.|.|.+.+..+ . .......|.|.. ....+|.+.... ....+.+|+.+.|
T Consensus 106 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~---------~~~~~P~i~~~~--~~~~~~~g~~v~L 174 (256)
T 3sob_H 106 MNSLRAEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSS---------ASTKGPSVFPLA--PSSKSTSGGTAAL 174 (256)
T ss_dssp ECSCCGGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECS---------SCCBCCEEEEEC--CC-----TTEEEE
T ss_pred ECCCCcccCEEEEEEEecCCCccccccccceeEECCCEEEEEec---------CCCCCCEEEEEC--CCcccccCCcEEE
Confidence 678999999999999987531 0 122334555531 122445554322 1234567999999
Q ss_pred EeeecC-CC-CCeEEE
Q psy16421 71 RCAASG-SP-PPSIMW 84 (151)
Q Consensus 71 ~C~~~g-~~-~~~~~W 84 (151)
.|.+.+ .| .+.+.|
T Consensus 175 ~C~~~~~~p~~~~v~W 190 (256)
T 3sob_H 175 GCLVKDYFPEPVTVSW 190 (256)
T ss_dssp EEEEEEEBSSCCEEEE
T ss_pred EEEEEEEECCCeEEEE
Confidence 999876 44 457899
No 399
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=98.45 E-value=2.3e-06 Score=58.24 Aligned_cols=29 Identities=17% Similarity=0.466 Sum_probs=25.8
Q ss_pred CceeEeecCCcEEEEeeecccCCCeeEEEc
Q psy16421 108 SQLIGAHEGQQLVLECISEAYPKSVNYWTR 137 (151)
Q Consensus 108 ~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k 137 (151)
+....+.+|+++.|.|.+.+.| +.+.|+|
T Consensus 169 p~~~~v~~G~~v~L~C~~~~~~-~~v~W~k 197 (282)
T 1qok_A 169 PAIMSASPGEKVTITCSASSSV-SYMHWFQ 197 (282)
T ss_dssp CSEEEECTTCCEEEEEEESSCC-SCCEEEE
T ss_pred CCEEEEcCCCcEEEEEEecCCC-ceEEEEE
Confidence 4456688999999999999999 8999999
No 400
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=98.45 E-value=2e-06 Score=58.08 Aligned_cols=30 Identities=27% Similarity=0.533 Sum_probs=25.9
Q ss_pred CceEeecCCeEEEEeeecCCC------CCeEEEEeC
Q psy16421 58 SDIMVREGSNVSMRCAASGSP------PPSIMWRRE 87 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~------~~~~~W~~~ 87 (151)
..+.+.+|+++.|.|.+.+.+ .+.+.|++.
T Consensus 13 ~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~ 48 (264)
T 2gjj_A 13 SSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQ 48 (264)
T ss_dssp SEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEE
T ss_pred CeEEecCCCcEEEEeEcCCcccccccCCceEEEEEE
Confidence 567888999999999998877 678999984
No 401
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=98.44 E-value=4.6e-07 Score=59.23 Aligned_cols=40 Identities=20% Similarity=0.421 Sum_probs=27.7
Q ss_pred CCCeeeeCCceeEeecCCcE-EEEeeec-ccCCCeeEEEcCCc
Q psy16421 100 VPPIVKIPSQLIGAHEGQQL-VLECISE-AYPKSVNYWTREKG 140 (151)
Q Consensus 100 ~~p~~~~~~~~~~~~~g~~~-~l~C~~~-g~p~~~~~W~k~~~ 140 (151)
.+|.+........ .+|+.+ .|.|.+. |.|.|.++|+|++.
T Consensus 115 ~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~ 156 (221)
T 3eow_R 115 AKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLG 156 (221)
T ss_dssp CCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSS
T ss_pred ECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCC
Confidence 3555543322222 678888 4999987 89999999998743
No 402
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=98.44 E-value=1.1e-07 Score=62.27 Aligned_cols=31 Identities=16% Similarity=0.496 Sum_probs=24.9
Q ss_pred eecCCcEEEEeeeccc-CC-CeeEEEcCCceec
Q psy16421 113 AHEGQQLVLECISEAY-PK-SVNYWTREKGDMI 143 (151)
Q Consensus 113 ~~~g~~~~l~C~~~g~-p~-~~~~W~k~~~~~~ 143 (151)
+..|+.+.|.|.+.|. |. +.++|+|||..+.
T Consensus 119 ~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 151 (214)
T 1ow0_A 119 LALNELVTLTCLARGFSPKDVLVRWLQGSQELP 151 (214)
T ss_dssp TTSSSEEEEEEEEEEESSSCCEEEEEETTEECC
T ss_pred hccCCceEEEEEEeeeECCCcEEEEEECCEECC
Confidence 4578889999999995 54 4799999987654
No 403
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=98.43 E-value=7.7e-07 Score=60.47 Aligned_cols=30 Identities=20% Similarity=0.575 Sum_probs=26.5
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEeC
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRRE 87 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~ 87 (151)
..+.+.+|+++.|.|.+.+.+.+.+.|++.
T Consensus 32 ~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~ 61 (279)
T 2wbj_D 32 SWVISKSGTSVKIECRSLDFQATTMFWYRQ 61 (279)
T ss_dssp SEEEEETTSCEEEEEEESSSCEEEEEEEEE
T ss_pred CeEEecCCCeEEEEEEeCCCCCCeEEEEEe
Confidence 567888999999999998888889999984
No 404
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=98.43 E-value=1.9e-07 Score=53.59 Aligned_cols=45 Identities=11% Similarity=0.253 Sum_probs=36.1
Q ss_pred CCCeeeeCC----ceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 100 VPPIVKIPS----QLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 100 ~~p~~~~~~----~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
.+|.|...+ ....+.+|+++.|.|.+.|.|.|.+.|+|+|..+..
T Consensus 3 ~~P~~~~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~ 51 (100)
T 3caf_A 3 RAPYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQ 51 (100)
T ss_dssp EEEEESCTTTTSCCEEEECTTCCEEEECCEEEESCCEEEEEETTEECCG
T ss_pred CCCEeEcCccccccEEEecCCCEEEEEEEccccCCCEEEEEECCEEccc
Confidence 356665433 466788999999999999999999999999876654
No 405
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.42 E-value=8.9e-08 Score=54.72 Aligned_cols=45 Identities=13% Similarity=0.172 Sum_probs=38.1
Q ss_pred CCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 100 VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 100 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
.+|.|...+....+.+|+++.|.|.+.|.|.|.+.|+|++..+..
T Consensus 9 ~~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~ 53 (96)
T 2ens_A 9 EEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPL 53 (96)
T ss_dssp CSCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSS
T ss_pred CCCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcC
Confidence 456677777777899999999999999999999999999776643
No 406
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=98.42 E-value=5.9e-08 Score=57.99 Aligned_cols=46 Identities=20% Similarity=0.356 Sum_probs=39.4
Q ss_pred CCCCCeeeeCCceeEeecCCcEEEEeeecccCCCe-eEEEcCCceecc
Q psy16421 98 NTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSV-NYWTREKGDMIA 144 (151)
Q Consensus 98 ~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~-~~W~k~~~~~~~ 144 (151)
+..+|.|.. +....+.+|+++.|.|.+.|.|.|. +.|++++..+..
T Consensus 11 V~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~ 57 (122)
T 2cry_A 11 VNGPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLES 57 (122)
T ss_dssp CCSSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECS
T ss_pred EecCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccC
Confidence 456788877 6777889999999999999999997 999999876654
No 407
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=98.41 E-value=4e-07 Score=51.85 Aligned_cols=44 Identities=16% Similarity=0.208 Sum_probs=37.3
Q ss_pred CCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 101 PPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 101 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
.+.|...+....+.+|+++.|.|.+ +.|.+.+.|+|+|..+..+
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~ 51 (95)
T 2k1m_A 8 VSAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISAS 51 (95)
T ss_dssp CCCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSS
T ss_pred CCeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCC
Confidence 4567777788899999999999999 8888999999998777543
No 408
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=98.41 E-value=3.8e-07 Score=53.24 Aligned_cols=39 Identities=13% Similarity=0.100 Sum_probs=33.9
Q ss_pred CCeeeeCCceeEeecCCcEEEEeeecccCC---CeeEEEcCC
Q psy16421 101 PPIVKIPSQLIGAHEGQQLVLECISEAYPK---SVNYWTREK 139 (151)
Q Consensus 101 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~---~~~~W~k~~ 139 (151)
.|.|...+..+.+.+|+++.|.|.+.|.|. |.++|+|++
T Consensus 4 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~ 45 (108)
T 3cx2_A 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGK 45 (108)
T ss_dssp CCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETT
T ss_pred ccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCC
Confidence 466777788889999999999999999998 999999976
No 409
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.40 E-value=1.5e-07 Score=54.74 Aligned_cols=47 Identities=15% Similarity=0.165 Sum_probs=38.4
Q ss_pred CCCeeeeCCceeEeecCCcEEEEeeecccCCC-eeEEEcCCceeccCC
Q psy16421 100 VPPIVKIPSQLIGAHEGQQLVLECISEAYPKS-VNYWTREKGDMIANG 146 (151)
Q Consensus 100 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~-~~~W~k~~~~~~~~~ 146 (151)
.++.|...+....+.+|+++.|.|.+.+.|.+ .+.|+|||..+..+.
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~ 54 (104)
T 2eny_A 7 GHVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSS 54 (104)
T ss_dssp CCCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCS
T ss_pred CCCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCC
Confidence 35567777888899999999999999998754 799999987765543
No 410
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=98.40 E-value=7.8e-07 Score=50.73 Aligned_cols=41 Identities=17% Similarity=0.167 Sum_probs=34.4
Q ss_pred eeeCCceeEeecCCcEEEEeeeccc-CCCeeEEEcCCceecc
Q psy16421 104 VKIPSQLIGAHEGQQLVLECISEAY-PKSVNYWTREKGDMIA 144 (151)
Q Consensus 104 ~~~~~~~~~~~~g~~~~l~C~~~g~-p~~~~~W~k~~~~~~~ 144 (151)
+...+....+.+|+++.|.|.+.|. |.|.+.|+|++..+..
T Consensus 4 v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~ 45 (97)
T 2bk8_A 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLEN 45 (97)
T ss_dssp EECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCS
T ss_pred eeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcC
Confidence 4455677889999999999999997 9999999999776543
No 411
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=98.40 E-value=1.6e-06 Score=57.02 Aligned_cols=29 Identities=17% Similarity=0.612 Sum_probs=24.6
Q ss_pred ecCCcEEEEeeeccc-CCC-eeEEEc-CCcee
Q psy16421 114 HEGQQLVLECISEAY-PKS-VNYWTR-EKGDM 142 (151)
Q Consensus 114 ~~g~~~~l~C~~~g~-p~~-~~~W~k-~~~~~ 142 (151)
.+|+.+.|.|.+.|. |.| .++|++ ||..+
T Consensus 139 ~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~l 170 (223)
T 1dee_B 139 NPSSTVAVGCLAQDFLPDSITFSWKYKNNSDI 170 (223)
T ss_dssp CSSSEEEEEEEEEEEBSSCCEEEEEETTSCBC
T ss_pred CCCCcEEEEEEEEEEeCCCeEEEeEccCCCcc
Confidence 478999999999986 777 899999 77654
No 412
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=98.40 E-value=1.2e-06 Score=57.55 Aligned_cols=29 Identities=21% Similarity=0.510 Sum_probs=24.7
Q ss_pred ceEeecCCeEEEEeeecCCC--CCeEEEEeC
Q psy16421 59 DIMVREGSNVSMRCAASGSP--PPSIMWRRE 87 (151)
Q Consensus 59 ~~~~~~g~~~~l~C~~~g~~--~~~~~W~~~ 87 (151)
.+.+.+|+++.|.|.+.+.+ .+.+.|++.
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~ 39 (225)
T 1op3_H 9 GGLVKAGGSLILSCGVSNFRISAHTMNWVRR 39 (225)
T ss_dssp CEEEETTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred CeEecCCCCEEEEEEecCcccCCceEEEEEe
Confidence 46788999999999998866 688999974
No 413
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.39 E-value=3.4e-07 Score=52.88 Aligned_cols=45 Identities=13% Similarity=0.253 Sum_probs=38.5
Q ss_pred CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 99 TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 99 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
..||.|...+....+.+|+++.|.|.+.+ |.+.+.|+|++..+..
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~ 50 (103)
T 2edf_A 6 SGPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRK 50 (103)
T ss_dssp CCCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCC
T ss_pred CCCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccC
Confidence 45778888888889999999999999998 8889999999876644
No 414
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.38 E-value=4.6e-07 Score=53.71 Aligned_cols=46 Identities=24% Similarity=0.372 Sum_probs=37.4
Q ss_pred CCCCCeeeeC---CceeEeecCCcEEEEeeecccCCCeeEEEcCCceec
Q psy16421 98 NTVPPIVKIP---SQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMI 143 (151)
Q Consensus 98 ~~~~p~~~~~---~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~ 143 (151)
+..+|.|... .....+.+|+++.|.|.+.|.|.|.+.|+|+|..+.
T Consensus 18 v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~ 66 (118)
T 2e7c_A 18 IAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD 66 (118)
T ss_dssp CSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC
T ss_pred eccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC
Confidence 3456777543 466788999999999999999999999999977664
No 415
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=98.38 E-value=4.5e-07 Score=61.37 Aligned_cols=73 Identities=15% Similarity=0.344 Sum_probs=42.4
Q ss_pred CccccccCCeEEEEEEEcCCC------C-CCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEee
Q psy16421 1 MTEVSREHMGAYLCIASNGVP------P-SVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCA 73 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~------~-~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~ 73 (151)
|.+++.+|+|.|.|.+.+..+ . .......|.|.. ....+|.+.... ....+.+|+.+.|.|.
T Consensus 82 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~---------~~~~~P~v~~~~--~~~~~~~g~~~~L~C~ 150 (263)
T 3iu4_H 82 MNSLQTDDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSA---------ASTKGPSVFPLA--PSSKGSTSGTAALGCL 150 (263)
T ss_dssp ECSCCGGGCEEEEEEEEECC---CEEEEEEECCCEEEEECS---------SCCBCCEEEEEC--CCCCC----EEEEEEE
T ss_pred ECCCCHHHCEEEEEEEEeCCCCccccccceeCCceEEEEec---------ccCCCCEEEEcc--CccccccCCcEEEEEE
Confidence 678999999999999987531 0 112333555531 122455554222 1223457899999999
Q ss_pred ecC-CC-CCeEEE
Q psy16421 74 ASG-SP-PPSIMW 84 (151)
Q Consensus 74 ~~g-~~-~~~~~W 84 (151)
+.+ .| .+.+.|
T Consensus 151 ~~~~~P~~~~v~W 163 (263)
T 3iu4_H 151 VKDYFPEPVTVSW 163 (263)
T ss_dssp EEEEBSSCCEEEE
T ss_pred EEeEeCCceEEEE
Confidence 877 34 367999
No 416
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=98.37 E-value=3.2e-06 Score=57.01 Aligned_cols=38 Identities=21% Similarity=0.329 Sum_probs=28.8
Q ss_pred CCeeEeCCCCCceEeecCCeEEEEeeecCCC-----CCeEEEEeC
Q psy16421 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSP-----PPSIMWRRE 87 (151)
Q Consensus 48 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~-----~~~~~W~~~ 87 (151)
.+.+...+ ..+.+.+|+++.|.|.+.+.+ .+.+.|++.
T Consensus 15 ~~~v~~~p--~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~ 57 (268)
T 1x9q_A 15 DVVMTQTP--LSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQ 57 (268)
T ss_dssp CCCEEEEC--SEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEE
T ss_pred cceEEeeC--CeEEecCCCCEEEEeEecCCcccccCCceEEEEEE
Confidence 34444444 467788999999999998876 478999974
No 417
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.37 E-value=5.1e-07 Score=52.53 Aligned_cols=46 Identities=9% Similarity=0.109 Sum_probs=37.1
Q ss_pred CCCCeeeeCCce-eEeecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 99 TVPPIVKIPSQL-IGAHEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 99 ~~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
..+|.|...+.. ..+.+|+++.|.|.+ +.|.+.+.|+|+|..+..+
T Consensus 13 ~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~ 59 (104)
T 1pd6_A 13 KKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMS 59 (104)
T ss_dssp STTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCC
T ss_pred cCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCC
Confidence 356666665444 789999999999999 7899999999998877654
No 418
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.37 E-value=1.1e-06 Score=57.29 Aligned_cols=74 Identities=16% Similarity=0.337 Sum_probs=44.3
Q ss_pred CccccccCCeEEEEEEEcCCCC--------C--CccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEE
Q psy16421 1 MTEVSREHMGAYLCIASNGVPP--------S--VSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSM 70 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~--------~--~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l 70 (151)
|.+++.+|+|.|.|.+.+..+. . ......|.|.... ....+|.+ .+..+ .+.|
T Consensus 75 I~~v~~~D~G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~-------~~~~~P~v---------~~~~~-~~~l 137 (207)
T 1ypz_E 75 IRDAQLEDSGTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKS-------QPPAKPSV---------FIMKN-GTNV 137 (207)
T ss_dssp ECSCCGGGCEEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCC-------CCCCCCEE---------EEEEE-TTEE
T ss_pred ECCCCHHHCEEEEEEEecCCcccccccccceeeecCccEEEEccCC-------CCCCCCeE---------EEeCC-CCeE
Confidence 6789999999999999987420 1 1233566664110 00112322 22222 3789
Q ss_pred EeeecC-CCC-CeEEEEeCCeeeEe
Q psy16421 71 RCAASG-SPP-PSIMWRREGGEMIT 93 (151)
Q Consensus 71 ~C~~~g-~~~-~~~~W~~~~~~~~~ 93 (151)
.|.+.+ .|. +.+.|++ + +.+.
T Consensus 138 ~C~~~g~~P~~~~v~W~~-~-~~l~ 160 (207)
T 1ypz_E 138 ACLVKDFYPKEVTISLRS-S-KKIV 160 (207)
T ss_dssp EEEEEEESSSCCEEEEEC-S-SEEE
T ss_pred EEEEeeEeCCCeEEEEec-C-Cccc
Confidence 999877 454 7999999 4 4544
No 419
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=98.37 E-value=9.4e-06 Score=52.13 Aligned_cols=85 Identities=19% Similarity=0.245 Sum_probs=53.5
Q ss_pred CceEeecCCeEEEEeeecCCCCCe-EEEEeCCeeeEe-cc------------c--C--------------------CC-C
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPS-IMWRREGGEMIT-NS------------F--N--------------------NT-V 100 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~-~~W~~~~~~~~~-~~------------~--~--------------------~~-~ 100 (151)
....+.+|+++.|.|.+.. +.|. +.|.-.-++... .. . . ++ .
T Consensus 7 ~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~~~~~~~l~l~~vs~~g~y~C~~~c~~~~~~~~~~l~V~~~ 85 (185)
T 1iam_A 7 SKVILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFLTVYWT 85 (185)
T ss_dssp SEEEEETTEEEEEEEEECS-SSCSEEEEECSSCEEEECSSSSSEEEEEEEEECSCBCCEEEEECSSCEEEEECEEEEEBC
T ss_pred CCcEEeCCCCEEEEEEccC-CCCccceEEeeCCCccEeccCCceeEEEEEecCcCCEEEEEEECCCCceEEEEEEEEeCC
Confidence 3466889999999999865 4444 666421111111 10 0 0 12 2
Q ss_pred CCeeeeCCceeEeecCCcEEEEeeecc-cCCC--eeEEEcCCceec
Q psy16421 101 PPIVKIPSQLIGAHEGQQLVLECISEA-YPKS--VNYWTREKGDMI 143 (151)
Q Consensus 101 ~p~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~--~~~W~k~~~~~~ 143 (151)
|..+.+.+....+.+|+.++|.|.+.| .|.+ .|.|+|++..+.
T Consensus 86 P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~ 131 (185)
T 1iam_A 86 PERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELK 131 (185)
T ss_dssp CSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEE
T ss_pred CCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcc
Confidence 334455555455899999999999998 5554 389999876553
No 420
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.37 E-value=2.1e-07 Score=53.84 Aligned_cols=44 Identities=14% Similarity=0.247 Sum_probs=35.7
Q ss_pred CCCeeeeCCce---eEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 100 VPPIVKIPSQL---IGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 100 ~~p~~~~~~~~---~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
.+|.+...+.. ..+.+|+++.|.|.+.+.|.+ +.|+|++..+..
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~ 52 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEE 52 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCC
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCC
Confidence 35666555555 788999999999999999999 999999876654
No 421
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=98.36 E-value=2.9e-06 Score=50.04 Aligned_cols=79 Identities=28% Similarity=0.641 Sum_probs=51.3
Q ss_pred CCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCCCCCeeeeCCcee--------EeecCC
Q psy16421 46 SMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVPPIVKIPSQLI--------GAHEGQ 117 (151)
Q Consensus 46 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~--------~~~~g~ 117 (151)
..+|.+...+ ..+.+.+|+++.|.|.+.|.|.|.+.|++ ++..+................... .+...+
T Consensus 7 ~~pP~i~~~p--~~~~v~~G~~v~L~C~~~g~P~p~v~W~k-~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D 83 (117)
T 2v9t_A 7 DFPPRIVEHP--SDLIVSKGEPATLNCKAEGRPTPTIEWYK-GGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPD 83 (117)
T ss_dssp CEEEEEEECC--CCEEECTTCCEEECCEEEEESCCEEEEEE-TTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSS
T ss_pred cCCCeeEcCC--CCEEEcCCCcEEEEEECCccCCCeEEEEE-CCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCc
Confidence 3577777766 57788999999999999999999999999 555554321100001111111110 124678
Q ss_pred cEEEEeeecc
Q psy16421 118 QLVLECISEA 127 (151)
Q Consensus 118 ~~~l~C~~~g 127 (151)
.....|.+..
T Consensus 84 ~G~Y~C~a~N 93 (117)
T 2v9t_A 84 EGVYVCVARN 93 (117)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEEe
Confidence 8899999863
No 422
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.35 E-value=3.6e-06 Score=49.38 Aligned_cols=74 Identities=23% Similarity=0.343 Sum_probs=50.3
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCCC-----CCeeeeCCceeEeecCCcEEE
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTV-----PPIVKIPSQLIGAHEGQQLVL 121 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~~-----~p~~~~~~~~~~~~~g~~~~l 121 (151)
.+|.+...+ ..+.+.+|+.+.|.|.+.|.|.+.+.|++ +++.+....+... .-.+.+. .+...+....
T Consensus 6 ~pp~i~~~~--~~~~v~~G~~v~l~C~~~g~p~p~i~W~k-~~~~~~~~~~~~~~~~~~~~~L~I~----~v~~~D~G~Y 78 (114)
T 2cqv_A 6 SGPQIIQFP--EDQKVRAGESVELFGKVTGTQPITCTWMK-FRKQIQESEHMKVENSENGSKLTIL----AARQEHCGCY 78 (114)
T ss_dssp CCCEESCCC--CSEEEETTCCEEEEEEEESSSSCEEEEEE-SSSBCCCSSSEEEEECSSEEEEEET----TCCTTTCEEE
T ss_pred CCCEEEeCC--CCeEEeCCCeEEEEEEEEcCCCCEEEEEE-CCEECcCCCCEEEEEcCCEEEEEEC----CCChhcCEEE
Confidence 577777665 67889999999999999999999999999 5555443211000 0011111 2456788889
Q ss_pred Eeeecc
Q psy16421 122 ECISEA 127 (151)
Q Consensus 122 ~C~~~g 127 (151)
.|.+..
T Consensus 79 ~C~a~N 84 (114)
T 2cqv_A 79 TLLVEN 84 (114)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 998753
No 423
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=98.35 E-value=3.2e-07 Score=60.55 Aligned_cols=73 Identities=16% Similarity=0.398 Sum_probs=44.7
Q ss_pred CccccccCCeEEEEEEEcCCC--------CCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEe
Q psy16421 1 MTEVSREHMGAYLCIASNGVP--------PSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRC 72 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~--------~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C 72 (151)
|.+++.+|+|.|.|.+.+..+ ........|.|.. ....+|.+...+ ....+.+|+.+.|.|
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~---------~~~~~P~i~~~~--~~~~~~~g~~~~l~C 151 (226)
T 3mlr_H 83 WTTLQASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSS---------GTTKGPSVFPLA--PSSKSTSGGTAALGC 151 (226)
T ss_dssp ESSCCGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECC---------CCCBCCEEEEEE--EEECSTTSSEEEEEE
T ss_pred ECCCCcccCEEEEEeEccCCCcccccchhhhhCCccEEeecc---------CCCCCCcEEEec--CcccccCCCCEEEEE
Confidence 678999999999999977531 0111233455531 112345554221 122345789999999
Q ss_pred eecC-CC-CCeEEE
Q psy16421 73 AASG-SP-PPSIMW 84 (151)
Q Consensus 73 ~~~g-~~-~~~~~W 84 (151)
.+.+ .| .+.+.|
T Consensus 152 ~~~~~~p~~~~v~W 165 (226)
T 3mlr_H 152 LVKDYFPEPVTVSW 165 (226)
T ss_dssp EEEEEBSSCCEEEE
T ss_pred EEEEEECCCeEEEE
Confidence 9877 44 467899
No 424
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=98.33 E-value=4.1e-07 Score=60.85 Aligned_cols=76 Identities=18% Similarity=0.303 Sum_probs=44.5
Q ss_pred ccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CCCC-e
Q psy16421 4 VSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SPPP-S 81 (151)
Q Consensus 4 v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~~~-~ 81 (151)
...+|.|.|+|++.+..+. ......+... +....+|.+...+. .....+|+.+.|.|.+.+ .|.+ .
T Consensus 96 ~~~~d~~~YtC~v~h~~~~-~~~~~~i~~~---------~~~~~~P~V~v~~~--~~~~~~g~~~~L~C~~~gf~P~~i~ 163 (240)
T 4acp_A 96 QDWLNGKEYKCKVSNKALP-APIEKTISKA---------KGQPREPQVYTLPP--SRDELTKNQVSLTCLVKGFYPSDIA 163 (240)
T ss_dssp HHHHHTCCEEEEEECC-----CEEEEECCC---------CSCCBCCEEEEECC--CGGGGGSSEEEEEEEEEEEBSSCCE
T ss_pred hhccCCCEEEEEEEcCCCC-cccccccccc---------CCCCCCCEEEEECC--ChHHhcCCceEEEEEEeEEeCCCcE
Confidence 3445789999999998652 1111121110 12235666655442 222234889999999988 5553 7
Q ss_pred EEEEeCCeeeE
Q psy16421 82 IMWRREGGEMI 92 (151)
Q Consensus 82 ~~W~~~~~~~~ 92 (151)
+.|++ +++.+
T Consensus 164 v~W~k-~g~~~ 173 (240)
T 4acp_A 164 VEWES-NGQPE 173 (240)
T ss_dssp EEEEE-TTEEC
T ss_pred EEEEE-CCEEC
Confidence 99999 56554
No 425
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=98.33 E-value=2.4e-06 Score=57.17 Aligned_cols=29 Identities=28% Similarity=0.511 Sum_probs=25.4
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEe
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRR 86 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~ 86 (151)
..+.+.+|+++.|.|.+.+.+.+.+.|++
T Consensus 9 ~~v~v~~G~~v~L~C~~~~~~~~~v~W~r 37 (253)
T 3to4_D 9 RWRLVPRGQAVNLRCILKNSQYPWMSWYQ 37 (253)
T ss_dssp SEEEEESSCCEEEEEECSCTTCCCEEEEE
T ss_pred CeEEEeCCCcEEEEEEeCCCCcceEEEEE
Confidence 45678899999999998888889999987
No 426
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=98.33 E-value=5.8e-07 Score=51.78 Aligned_cols=77 Identities=16% Similarity=0.193 Sum_probs=51.5
Q ss_pred ecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCCCCCeeeeCC-----ceeEeecCCc
Q psy16421 44 TSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVPPIVKIPS-----QLIGAHEGQQ 118 (151)
Q Consensus 44 ~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~-----~~~~~~~g~~ 118 (151)
.+..+|.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+....+ -.+.... ....+...+.
T Consensus 4 ~~~~~P~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~i~W~k-~~~~~~~~~~----~~~~~~~~~~~L~i~~~~~~D~ 76 (103)
T 3qp3_A 4 TLDHAPRITLRM--RSHRVPCGQNTRFILNVQSKPTAEVKWYH-NGVELQESSK----IHYTNTSGVLTLEILDCHTDDS 76 (103)
T ss_dssp TTCEEEEEEECC--CCEEEETTCCEEEEEEEEEESCCEEEEEE-TTEECCCCSS----EEEEEETTEEEEEECSCCGGGC
T ss_pred CCCCCCEEEeCC--cceEEeCCCeEEEEEEEEecCCCEEEEEE-CCEECCCCCC----EEEEECCCEEEEEEcCCCcccC
Confidence 344577777766 67889999999999999999999999999 5655543221 0111100 0112345777
Q ss_pred EEEEeeecc
Q psy16421 119 LVLECISEA 127 (151)
Q Consensus 119 ~~l~C~~~g 127 (151)
....|.+..
T Consensus 77 G~Y~C~a~N 85 (103)
T 3qp3_A 77 GTYRAVCTN 85 (103)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEe
Confidence 888998753
No 427
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.33 E-value=8.3e-07 Score=51.19 Aligned_cols=44 Identities=14% Similarity=0.161 Sum_probs=37.7
Q ss_pred CCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 100 VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 100 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
.+|.|...+....+.+|+++.|.|. .+.|.+.+.|+|++..+..
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~-~~~p~~~v~W~k~~~~l~~ 50 (103)
T 2dku_A 7 GANCFTEELTNLQVEEKGTAVFTCK-TEHPAATVTWRKGLLELRA 50 (103)
T ss_dssp CCCCCSSCCCCEEEETTSEEEEEEE-CSSCCSCCEEEESSCBCCS
T ss_pred CCCEeEecCCcEEEeCCCcEEEEEE-eCCCCCeEEEEeCCEECCC
Confidence 4677877888889999999999999 5889999999999876654
No 428
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=98.32 E-value=6.9e-06 Score=46.18 Aligned_cols=68 Identities=22% Similarity=0.337 Sum_probs=47.1
Q ss_pred CeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeecc
Q psy16421 49 PDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEA 127 (151)
Q Consensus 49 p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g 127 (151)
+.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|++ +++.+... ....+.+.. +...+.....|.+..
T Consensus 4 ~~i~~~p--~~~~v~~G~~~~l~C~~~g~p~p~i~W~~-~~~~~~~~----~~~~L~i~~----v~~~d~G~Y~C~a~n 71 (91)
T 3bfo_A 4 LQICVEP--TSQKLMPGSTLVLQCVAVGSPIPHYQWFK-NELPLTHE----TKKLYMVPY----VDLEHQGTYWCHVYN 71 (91)
T ss_dssp CEEEECC--CCEEECTTSCEEEECEEECSSCCEEEEEE-TTEECTTC----CSSEEEESS----CCGGGCEEEEEEEEC
T ss_pred eEEEECC--CccEecCCCcEEEEEEeccCCCCEEEEEc-CCeeCCcC----CCCeEEECC----CCHHhCEEEEEEEEc
Confidence 4444444 46778899999999999999999999999 56554421 112333332 345677889999864
No 429
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=98.32 E-value=1.1e-06 Score=50.41 Aligned_cols=44 Identities=9% Similarity=0.057 Sum_probs=36.1
Q ss_pred CCCeeeeCCce-eEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 100 VPPIVKIPSQL-IGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 100 ~~p~~~~~~~~-~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
.+|.|...+.. ..+.+|+++.|.|.+. .|.+.+.|+|+|..+..
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~ 50 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRP 50 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCC
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCC
Confidence 46777776655 6788999999999998 79999999999876644
No 430
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=98.31 E-value=3.2e-06 Score=55.02 Aligned_cols=29 Identities=28% Similarity=0.619 Sum_probs=23.4
Q ss_pred CceEeecCCeEEEEeeecCC--CCCeEEEEe
Q psy16421 58 SDIMVREGSNVSMRCAASGS--PPPSIMWRR 86 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~--~~~~~~W~~ 86 (151)
..+.+.+|+++.|.|.+.+. +.+.+.|++
T Consensus 7 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r 37 (215)
T 3nl4_H 7 GGRLVTPGTPLTLACTVSGFSLNTYSMFWVR 37 (215)
T ss_dssp CCCEECTTCCEEEEEEEESSCTTTCCEEEEE
T ss_pred CCEEEcCCCcEEEEEEecCcccCCCeEEEEE
Confidence 35678889999999998763 367899986
No 431
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=98.30 E-value=4.4e-06 Score=57.15 Aligned_cols=31 Identities=13% Similarity=0.329 Sum_probs=26.6
Q ss_pred CceeEeecCCcEEEEeeecccCCC------eeEEEcC
Q psy16421 108 SQLIGAHEGQQLVLECISEAYPKS------VNYWTRE 138 (151)
Q Consensus 108 ~~~~~~~~g~~~~l~C~~~g~p~~------~~~W~k~ 138 (151)
+....+.+|+++.|.|.+.+.|.+ .+.|+|+
T Consensus 166 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~ 202 (291)
T 2gki_A 166 PSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQ 202 (291)
T ss_dssp CSEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEE
T ss_pred CCEEEEcCCCcEEEEEEcCCccccccccceeEEEEEE
Confidence 445678899999999999998876 8999996
No 432
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=98.28 E-value=4.3e-06 Score=53.29 Aligned_cols=30 Identities=17% Similarity=0.328 Sum_probs=24.2
Q ss_pred CceEeecCCeEEEEeeecC-CCCCeEEEEeC
Q psy16421 58 SDIMVREGSNVSMRCAASG-SPPPSIMWRRE 87 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g-~~~~~~~W~~~ 87 (151)
..+.+.+|+++.|.|.+.+ .+.+.+.|++.
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~ 37 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHT 37 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESS
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEec
Confidence 4567889999999999855 34789999983
No 433
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=98.28 E-value=4.2e-06 Score=54.72 Aligned_cols=29 Identities=14% Similarity=0.568 Sum_probs=24.4
Q ss_pred ecCCcEEEEeeecc-cCC-C-eeEEEcCCcee
Q psy16421 114 HEGQQLVLECISEA-YPK-S-VNYWTREKGDM 142 (151)
Q Consensus 114 ~~g~~~~l~C~~~g-~p~-~-~~~W~k~~~~~ 142 (151)
.+|+.+.|.|.+.| .|. + .++|+|+|..+
T Consensus 136 ~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~ 167 (221)
T 3m8o_H 136 QPDGNVVIACLVQGFFPQEPLSVTWSESGQGV 167 (221)
T ss_dssp CCTTEEEEEEEEEEEBSSCSEEEEESCCSTTC
T ss_pred ccCCCEEEEEEEEeeECCCCEEEEEEECCEEC
Confidence 57999999999998 776 4 79999987654
No 434
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=98.27 E-value=1e-06 Score=57.36 Aligned_cols=46 Identities=22% Similarity=0.354 Sum_probs=38.1
Q ss_pred CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 99 TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 99 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
..+|.| ..+....+.+|+.+.|.|.+.|.|.|.+.|+|+|..+..+
T Consensus 17 ~~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~ 62 (215)
T 3mtr_A 17 MYAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSS 62 (215)
T ss_dssp CEEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCS
T ss_pred ecCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCC
Confidence 456677 4556688999999999999999999999999998766544
No 435
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=98.26 E-value=5.9e-06 Score=54.37 Aligned_cols=29 Identities=21% Similarity=0.556 Sum_probs=23.6
Q ss_pred eecCCcEEEEeeeccc-CCC-eeEEEcCCce
Q psy16421 113 AHEGQQLVLECISEAY-PKS-VNYWTREKGD 141 (151)
Q Consensus 113 ~~~g~~~~l~C~~~g~-p~~-~~~W~k~~~~ 141 (151)
+.+|+.+.|.|.+.|. |.| .++|+|++..
T Consensus 142 ~~~g~~~~l~C~~~g~~P~p~~v~W~~~~~~ 172 (228)
T 3bae_H 142 DTTGSSVTLGCLVKGYFPEPVTLTWNSGSLS 172 (228)
T ss_dssp --CCSEEEEEEEEEEEBSSCCEEEEGGGTCC
T ss_pred ccCCCCEEEEEEEccEeCCCEEEEEeeCCcc
Confidence 4579999999999986 877 8999998754
No 436
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=98.25 E-value=3.9e-06 Score=53.69 Aligned_cols=28 Identities=7% Similarity=-0.020 Sum_probs=24.3
Q ss_pred cCCcEEEEeeecccCCCeeEEEcCCcee
Q psy16421 115 EGQQLVLECISEAYPKSVNYWTREKGDM 142 (151)
Q Consensus 115 ~g~~~~l~C~~~g~p~~~~~W~k~~~~~ 142 (151)
.+.++.|.|.+.+.|.|.+.|+++|..+
T Consensus 114 ~~~~v~L~C~~~~~p~~~~~W~~~g~~l 141 (182)
T 1hnf_A 114 TCINTTLTCEVMNGTDPELNLYQDGKHL 141 (182)
T ss_dssp ETTTTEEEEECSSCSSCEEEEEESSCEE
T ss_pred ccCcEEEEeEccCCCCCEEEEEECCEEC
Confidence 3458999999999999999999998765
No 437
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=98.25 E-value=2e-06 Score=49.81 Aligned_cols=44 Identities=9% Similarity=0.197 Sum_probs=33.0
Q ss_pred CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 99 TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 99 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
..||.+..... ...+..+.|.|.+.|.|.|.++|+|+|..+..+
T Consensus 2 ~~pP~i~~~~~---~~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~ 45 (103)
T 1wwb_X 2 HFAPTITFLES---PTSDHHWCIPFTVKGNPKPALQWFYNGAILNES 45 (103)
T ss_dssp CCCCCCCCCCC---CCCCCEEEEEEEEECSSCCEEEEEETTEEECCC
T ss_pred CCCCEEEeccC---ceECcEEEEEEEEEEeCCCEEEEEECCEECCCC
Confidence 35666542221 346889999999999999999999998776544
No 438
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=98.24 E-value=5.8e-06 Score=55.29 Aligned_cols=29 Identities=24% Similarity=0.591 Sum_probs=24.2
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEeC
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRRE 87 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~ 87 (151)
..+.+.+|+++.|.|.+.. +.+.+.|++.
T Consensus 11 ~~v~v~~G~~v~L~C~~~~-~~~~v~W~r~ 39 (252)
T 1oga_E 11 KYLFRKEGQNVTLSCEQNL-NHDAMYWYRQ 39 (252)
T ss_dssp SEEEEETTCCEEECCEECS-CCSEEEEEEE
T ss_pred CeEEEcCCCcEEEEEEeCC-CCCEEEEEEE
Confidence 4577889999999999854 5789999984
No 439
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=98.23 E-value=4.2e-06 Score=48.46 Aligned_cols=76 Identities=21% Similarity=0.420 Sum_probs=44.4
Q ss_pred cCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCC---CCCCeeeeCCceeEeecCCcEEE
Q psy16421 45 SSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNN---TVPPIVKIPSQLIGAHEGQQLVL 121 (151)
Q Consensus 45 ~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~---~~~p~~~~~~~~~~~~~g~~~~l 121 (151)
+..+|.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|++ ++..+...... .....+.+. .+...+....
T Consensus 7 ~~~~P~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~i~W~~-~~~~~~~~~~~~~~~~~~~L~i~----~v~~~D~G~Y 79 (108)
T 3kvq_A 7 ERVAPTITGNL--ENQTTSIGESIEVSCTASGNPPPQIMWFK-DNETLVEDSGIVLKDGNRNLTIR----RVRKEDEGLY 79 (108)
T ss_dssp ----CCCBSCC--CCEEEETTCCEEEECBCC----CCEEEEE-SSSBCCCBTTEEEETTTTEEEEC----SCCGGGCEEE
T ss_pred ccCCCceecCC--CCeEEeCCCeEEEEEECcCcCCCeEEEEE-CCeEcccCCCeEEeCCCcEEEEe----ecCcccCEEE
Confidence 34677777766 67888999999999999999999999999 45444322110 011122221 2345778888
Q ss_pred Eeeecc
Q psy16421 122 ECISEA 127 (151)
Q Consensus 122 ~C~~~g 127 (151)
.|.+..
T Consensus 80 ~C~a~n 85 (108)
T 3kvq_A 80 TCQACS 85 (108)
T ss_dssp EEEEC-
T ss_pred EEEEEe
Confidence 998864
No 440
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.23 E-value=7.9e-07 Score=54.57 Aligned_cols=32 Identities=19% Similarity=0.307 Sum_probs=29.9
Q ss_pred CceeEeecCCcEEEEeeecccCCCeeEEEcCC
Q psy16421 108 SQLIGAHEGQQLVLECISEAYPKSVNYWTREK 139 (151)
Q Consensus 108 ~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~ 139 (151)
+..+.+.+|+++.|.|.+.|.|.|.++|+|++
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g 56 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAI 56 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEEC
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECC
Confidence 56778999999999999999999999999987
No 441
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=98.23 E-value=4.3e-06 Score=48.41 Aligned_cols=46 Identities=11% Similarity=0.260 Sum_probs=37.8
Q ss_pred CCCCeeeeCCceeEeecCCcEEEEeeecccC--CCeeEEEcCCceecc
Q psy16421 99 TVPPIVKIPSQLIGAHEGQQLVLECISEAYP--KSVNYWTREKGDMIA 144 (151)
Q Consensus 99 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p--~~~~~W~k~~~~~~~ 144 (151)
..+|.|...+....+.+|+++.|.|.+.+.| .+.+.|+|++..+..
T Consensus 8 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~ 55 (112)
T 3so5_A 8 FPXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQD 55 (112)
T ss_dssp CCSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTT
T ss_pred CCCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCccccc
Confidence 4578888888888899999999999999654 578999999776543
No 442
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=98.23 E-value=1.3e-05 Score=53.02 Aligned_cols=31 Identities=16% Similarity=0.401 Sum_probs=25.3
Q ss_pred ecCCcEEEEeeeccc-CCC-eeEEEcCCceecc
Q psy16421 114 HEGQQLVLECISEAY-PKS-VNYWTREKGDMIA 144 (151)
Q Consensus 114 ~~g~~~~l~C~~~g~-p~~-~~~W~k~~~~~~~ 144 (151)
..|+.+.|.|.+.|. |.+ .+.|+|||..+..
T Consensus 134 ~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~~~~ 166 (238)
T 1bec_A 134 ANKQKATLVCLARGFFPDHVELSWWVNGKEVHS 166 (238)
T ss_dssp SSSCSCSEEEEEEEEBSCCEEEEEEETTEEECT
T ss_pred ccCCceEEEEEEeeEeCCCcEEEEEECCEECCC
Confidence 469999999999985 655 7999999876643
No 443
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=98.22 E-value=9e-06 Score=54.42 Aligned_cols=29 Identities=17% Similarity=0.497 Sum_probs=22.3
Q ss_pred EeecCCcEEEEeeecc-cCCC-eeEEEcCCc
Q psy16421 112 GAHEGQQLVLECISEA-YPKS-VNYWTREKG 140 (151)
Q Consensus 112 ~~~~g~~~~l~C~~~g-~p~~-~~~W~k~~~ 140 (151)
.+..|+.+.|.|.+.| .|.+ .++|++++.
T Consensus 135 ~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~ 165 (253)
T 3liz_H 135 AAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 165 (253)
T ss_dssp ----CCEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred ccCCCCcEEEEEEEeeEeCCCeEEEEEeCCe
Confidence 3457999999999998 7777 799999876
No 444
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=98.22 E-value=9.8e-06 Score=53.55 Aligned_cols=29 Identities=17% Similarity=0.593 Sum_probs=22.4
Q ss_pred ecC-CcEEEEeeeccc-CCC-eeEEEc-CCcee
Q psy16421 114 HEG-QQLVLECISEAY-PKS-VNYWTR-EKGDM 142 (151)
Q Consensus 114 ~~g-~~~~l~C~~~g~-p~~-~~~W~k-~~~~~ 142 (151)
..| +.+.|.|.+.|. |.| .++|++ ||..+
T Consensus 138 ~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~l 170 (232)
T 1dn0_B 138 PSDTSSVAVGCLAQDFLPDSITFSWKYKNNSDI 170 (232)
T ss_dssp ---CCSEEEEEEEEEEBSSCCEEEEEETTSCEE
T ss_pred CCCCCcEEEEEEEEEEeCCCeEEEEEcCCCCce
Confidence 367 999999999985 776 899999 87655
No 445
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=98.22 E-value=2e-06 Score=49.09 Aligned_cols=74 Identities=19% Similarity=0.246 Sum_probs=49.5
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCC----CCC--eeeeCCceeEeecCCcEE
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNT----VPP--IVKIPSQLIGAHEGQQLV 120 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~----~~p--~~~~~~~~~~~~~g~~~~ 120 (151)
.+|.+...+ ....+.+|+.+.|.|.+.|.|.+.+.|++ +++.+....... ..- .+.+. .+...+...
T Consensus 4 ~~P~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~~~~~~~~~~~~~~~~~~~L~i~----~v~~~D~G~ 76 (99)
T 1g1c_A 4 EAPKIFERI--QSQTVGQGSDAHFRVRVVGKPDPECEWYK-NGVKIERSDRIYWYWPEDNVCELVIR----DVTGEDSAS 76 (99)
T ss_dssp EEEEEEECC--CCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCCSSEEEEEEETTEEEEEEC----SCCGGGCEE
T ss_pred CCCceEecC--cceEEcCCCcEEEEEEEEEeCCCEEEEEE-CCEECCCCCCEEEEEcCCCEEEEEEC----CCCcCCCEE
Confidence 456776665 57888999999999999999999999999 566554322100 000 11111 244677888
Q ss_pred EEeeecc
Q psy16421 121 LECISEA 127 (151)
Q Consensus 121 l~C~~~g 127 (151)
..|.+..
T Consensus 77 Y~C~a~N 83 (99)
T 1g1c_A 77 IMVKAIN 83 (99)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999864
No 446
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=98.20 E-value=6.1e-07 Score=53.36 Aligned_cols=32 Identities=28% Similarity=0.527 Sum_probs=26.1
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEe
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~ 33 (151)
|.+++.+|+|.|+|.|.|..| .....+.|.|.
T Consensus 78 I~~v~~~DsG~Y~C~a~n~~g-~~~~~~~l~V~ 109 (122)
T 3s35_X 78 IDGVTRSDQGLYTCAASSGLM-TKKNSTFVRVH 109 (122)
T ss_dssp ESSCCGGGCEEEEEEEECSSC-EEEEEEEEEEE
T ss_pred ECCCCcccCEEEEEEEccCCC-ceEEEEEEEEe
Confidence 578999999999999999988 45566666664
No 447
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.20 E-value=1.8e-06 Score=52.03 Aligned_cols=38 Identities=16% Similarity=0.101 Sum_probs=32.9
Q ss_pred CeeeeCCceeEeecCCcEEEEeeeccc---CCCeeEEEcCC
Q psy16421 102 PIVKIPSQLIGAHEGQQLVLECISEAY---PKSVNYWTREK 139 (151)
Q Consensus 102 p~~~~~~~~~~~~~g~~~~l~C~~~g~---p~~~~~W~k~~ 139 (151)
+.|...+..+.+.+|+++.|.|.+.|. |.|.|.|||++
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk 48 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGK 48 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESS
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCc
Confidence 457777888899999999999999875 89999999973
No 448
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.20 E-value=1.6e-06 Score=49.58 Aligned_cols=74 Identities=18% Similarity=0.379 Sum_probs=49.2
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCC----CC--CeeeeCCceeEeecCCcEE
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNT----VP--PIVKIPSQLIGAHEGQQLV 120 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~----~~--p~~~~~~~~~~~~~g~~~~ 120 (151)
.+|.+...+ ..+.+.+|+.+.|.|.+.|.|.+.+.|++ +++.+....... .. ..+.+. .+...+...
T Consensus 4 ~~P~~~~~p--~~~~~~~G~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~~~~~~~~~~~~~~~L~i~----~v~~~D~G~ 76 (100)
T 2kdg_A 4 GPPRFIQVP--ENMSIDEGRFCRMDFKVSGLPAPDVSWYL-NGRTVQSDDLHKMIVSEKGLHSLIFE----VVRASDAGA 76 (100)
T ss_dssp EEEECCCCC--CCEEEETTCCEEEEEECEEESCCEEEEEE-TTEEECCCSSSCEEEETTTEEEEEES----SCCGGGCEE
T ss_pred CCCeEEeCC--CCEEecCCCEEEEEEEEEeeCCCEEEEEE-CCEECcCCCcEEEEEcCCCeEEEEEC----CCCcccCEE
Confidence 355665555 56788999999999999999999999999 566655322100 00 012221 244577788
Q ss_pred EEeeecc
Q psy16421 121 LECISEA 127 (151)
Q Consensus 121 l~C~~~g 127 (151)
..|.+..
T Consensus 77 Y~C~a~n 83 (100)
T 2kdg_A 77 YACVAKN 83 (100)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 9999764
No 449
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.19 E-value=1.9e-06 Score=50.84 Aligned_cols=75 Identities=15% Similarity=0.175 Sum_probs=50.1
Q ss_pred ecCCCC-eeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCCCC------CeeeeCCceeEeecC
Q psy16421 44 TSSMPP-DILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVP------PIVKIPSQLIGAHEG 116 (151)
Q Consensus 44 ~~~~~p-~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~~~------p~~~~~~~~~~~~~g 116 (151)
.+..+| .+...+ ..+.+.+|+.+.|.|.+.+.|.|.+.|++ ++..+....+.... ..+.+. .+...
T Consensus 8 ~V~~~p~~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~l~~~~~~~~~~~~~~~~~L~I~----~v~~~ 80 (115)
T 2cr6_A 8 LVQGRRVHIIEDL--EDVDVQEGSSATFRCRISPANYEPVHWFL-DKTPLHANELNEIDAQPGGYHVLTLR----QLALK 80 (115)
T ss_dssp CCCSSCCEEEECC--CEEEEETTSCEECCCEEESTTCCSCEEEE-SSCEECCSSSCCBCCBTTTBCCBEEC----SCCTT
T ss_pred EEcCCCCeEeccC--ccEEEeCCCcEEEEEEEcCCCCCccEEEE-CCEECCCCCcEEEEEcCCCEEEEEEc----CCChh
Confidence 334444 666665 67889999999999999999999999999 66666543221110 112221 24567
Q ss_pred CcEEEEeee
Q psy16421 117 QQLVLECIS 125 (151)
Q Consensus 117 ~~~~l~C~~ 125 (151)
+.....|.+
T Consensus 81 D~G~Y~C~~ 89 (115)
T 2cr6_A 81 DSGTIYFEA 89 (115)
T ss_dssp TCEEEEEEE
T ss_pred hCEEEEEEE
Confidence 888889984
No 450
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=98.19 E-value=1.6e-06 Score=50.36 Aligned_cols=44 Identities=16% Similarity=0.213 Sum_probs=36.8
Q ss_pred CCCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 99 TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 99 ~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
..+|.|...+....+.+|+++.|.|.+.+. |.+.|+|++..+..
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~ 49 (108)
T 2dm7_A 6 SGPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPETLRD 49 (108)
T ss_dssp CCCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCS
T ss_pred CCCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCC
Confidence 467888878888899999999999999875 68999999776643
No 451
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=98.19 E-value=1.8e-06 Score=48.85 Aligned_cols=74 Identities=16% Similarity=0.303 Sum_probs=46.7
Q ss_pred CCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCC-eeeEecccCC---CCCCeeeeCCceeEeecCCcEEEEe
Q psy16421 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREG-GEMITNSFNN---TVPPIVKIPSQLIGAHEGQQLVLEC 123 (151)
Q Consensus 48 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~-~~~~~~~~~~---~~~p~~~~~~~~~~~~~g~~~~l~C 123 (151)
+|.+...+ ..+.+.+|+.+.|.|.+.|.|.|.+.|++++ +..+...... ...-.+.+. .+...+.....|
T Consensus 2 ~P~i~~~~--~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~----~~~~~D~G~Y~C 75 (93)
T 1wit_A 2 KPKILTAS--RKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIFFP----SAKRADSGNYKL 75 (93)
T ss_dssp CCEECCCC--CEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTTSEEEEETTEEEEECT----TBCGGGCEEEEE
T ss_pred CCeEEcCC--CceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCcEEEEecCCEEEEEEC----CCChhcCEEEEE
Confidence 45565444 5678889999999999999999999999943 1444321100 000011111 234567788999
Q ss_pred eecc
Q psy16421 124 ISEA 127 (151)
Q Consensus 124 ~~~g 127 (151)
.+..
T Consensus 76 ~a~N 79 (93)
T 1wit_A 76 KVKN 79 (93)
T ss_dssp EEEE
T ss_pred EEEc
Confidence 8864
No 452
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=98.19 E-value=4.7e-06 Score=49.23 Aligned_cols=77 Identities=19% Similarity=0.336 Sum_probs=52.2
Q ss_pred cCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCCCCCeeeeC------CceeEeecCCc
Q psy16421 45 SSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVPPIVKIP------SQLIGAHEGQQ 118 (151)
Q Consensus 45 ~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~------~~~~~~~~g~~ 118 (151)
...+|.|...+ ..+.+.+|+.+.|.|.+.|.|.+.+.|++ +++.+..... .-.+... .....+...+.
T Consensus 12 ~~~~p~f~~~p--~~~~v~~G~~v~L~C~~~g~p~p~v~W~k-~~~~~~~~~~---~~~~~~~~~~~~~L~I~~v~~~D~ 85 (116)
T 2kkq_A 12 HKRAPMFIYKP--QSKKVLEGDSVKLECQISAIPPPKLFWKR-NNEMVQFNTD---RISLYQDNTGRVTLLIKDVNKKDA 85 (116)
T ss_dssp CCBCCCBSSCC--CCEEEETTEEEEEEEEBCCBSCCEEEEEE-TTEECCCCBT---TEEEEECTTCEEEEEEEEECGGGC
T ss_pred CCCCCeEEeCC--CcEEEeCCCcEEEEEEEeccCCCEEEEEE-CCEECcCCCC---eEEEEeCCCCeEEEEECCCCcccC
Confidence 34678887777 67899999999999999999999999999 5555442110 0011111 11123556788
Q ss_pred EEEEeeecc
Q psy16421 119 LVLECISEA 127 (151)
Q Consensus 119 ~~l~C~~~g 127 (151)
....|.+..
T Consensus 86 G~Y~C~a~N 94 (116)
T 2kkq_A 86 GWYTVSAVN 94 (116)
T ss_dssp EEEEEEEEE
T ss_pred EEEEEEEEc
Confidence 889998754
No 453
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.18 E-value=9.6e-06 Score=45.20 Aligned_cols=63 Identities=17% Similarity=0.381 Sum_probs=42.8
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCC-----CCCCeeeeCCceeEeecCCcEEEEeeec
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNN-----TVPPIVKIPSQLIGAHEGQQLVLECISE 126 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~-----~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 126 (151)
..+.+.+|+.+.|.|.+.+ |.|.+.|+| +++.+....+. ...-.+.+. .+...+.....|.+.
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k-~g~~l~~~~~~~~~~~~~~~~L~I~----~~~~~D~G~Y~C~a~ 71 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYK-DGERLASQGRVQLEQAGARQVLRVQ----GARSGDAGEYLCDAP 71 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEE-TTEECCCCSSEEEEECSSCEEEEES----SCSSTTCEEEEEECT
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEE-CCEEccccccEEEeecCCeEEEEec----CCCCcccEEEEEEEC
Confidence 4678889999999999977 888999999 67776543320 001112221 245678888999873
No 454
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=98.18 E-value=1.7e-06 Score=49.13 Aligned_cols=74 Identities=15% Similarity=0.297 Sum_probs=43.4
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCCC-----CCeeeeCCceeEeecCCcEEE
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTV-----PPIVKIPSQLIGAHEGQQLVL 121 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~~-----~p~~~~~~~~~~~~~g~~~~l 121 (151)
.|+.+..++....+.+.+|+.+.|.|.+.+ |.+.+.|+| |++.+....+... .-.+.+. .+...+....
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k-~g~~i~~~~~~~i~~~~~~~~L~I~----~v~~~D~G~Y 76 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYK-DGQEVEESDFVVLENEGPHRRLVLP----ATQPSDGGEF 76 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEE-TTSCCCCCSSCEEEEETTEEEEEES----SCCGGGCSEE
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEE-CCEEeeeeeeeeEEecCCeEEEEeC----CCChhhcEEE
Confidence 455555544212234468999999999976 888999999 6766654332100 0011111 2345666778
Q ss_pred Eeeec
Q psy16421 122 ECISE 126 (151)
Q Consensus 122 ~C~~~ 126 (151)
.|.+.
T Consensus 77 ~C~a~ 81 (91)
T 2lvc_A 77 QCVAG 81 (91)
T ss_dssp EEECS
T ss_pred EEEEc
Confidence 88763
No 455
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=98.18 E-value=1.7e-06 Score=52.10 Aligned_cols=32 Identities=19% Similarity=0.177 Sum_probs=27.9
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEe
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~ 33 (151)
|.+++++|+|.|+|.+.|..+ ..+..+.|+|.
T Consensus 79 I~~v~~~DaG~Y~Cevsn~~g-~~~~~~~L~V~ 110 (126)
T 2dav_A 79 IIKAKDNFAGNYRCEVTYKDK-FDSCSFDLEVH 110 (126)
T ss_dssp ECSCCTTSCEEEEEEEECSSC-EEEECCEEEEE
T ss_pred EccCCcccCEEEEEEEEeCCC-cEEEEEEEEEE
Confidence 678999999999999999987 67777888875
No 456
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.18 E-value=4.9e-06 Score=47.54 Aligned_cols=74 Identities=20% Similarity=0.383 Sum_probs=50.4
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccC-C--CCCCeeeeCCceeEeecCCcEEEEe
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFN-N--TVPPIVKIPSQLIGAHEGQQLVLEC 123 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~-~--~~~p~~~~~~~~~~~~~g~~~~l~C 123 (151)
.+|.+...+ ..+.+.+|+.+.|.|.+.|.|.+.+.|++ ++..+..... . ...-.+.+ ..+...+.....|
T Consensus 7 ~~P~i~~~p--~~~~v~~G~~~~l~C~~~g~p~p~v~W~~-~~~~~~~~~~~~~~~~~~~L~i----~~v~~~d~G~Y~C 79 (100)
T 2edj_A 7 GPPIILQGP--ANQTLAVDGTALLKCKATGDPLPVISWLK-EGFTFPGRDPRATIQEQGTLQI----KNLRISDTGTYTC 79 (100)
T ss_dssp SSCEEEECC--CCEEEESSSEEEECCEEECSSCCEEEEEE-SSSEESSSCSSCEECTTCCEEE----ESCCTTTCCEEEE
T ss_pred CCCEEEeCc--CCEEEcCCCcEEEEEEEEEcCCCEEEEEE-CCEECCCCCCCEEEcCCCEEEE----ccCCcccCEEEEE
Confidence 578887766 67888999999999999999999999999 5555542111 0 00011211 1244577778999
Q ss_pred eecc
Q psy16421 124 ISEA 127 (151)
Q Consensus 124 ~~~g 127 (151)
.+..
T Consensus 80 ~a~n 83 (100)
T 2edj_A 80 VATS 83 (100)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 9864
No 457
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=98.17 E-value=2.8e-06 Score=48.45 Aligned_cols=74 Identities=24% Similarity=0.372 Sum_probs=48.9
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCC---CC---CeeeeCCceeEeecCCcEE
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNT---VP---PIVKIPSQLIGAHEGQQLV 120 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~---~~---p~~~~~~~~~~~~~g~~~~ 120 (151)
.+|.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|++ ++..+....... .. -.+.+. .+...+...
T Consensus 4 ~~P~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~~~~~~~~~~~~~~~~~~~~~~L~i~----~~~~~D~G~ 76 (99)
T 1u2h_A 4 APPTFKVSL--MDQSVREGQDVIMSIRVQGEPKPVVSWLR-NRQPVRPDQRRFAEEAEGGLCRLRIL----AAERGDAGF 76 (99)
T ss_dssp EEEEEEECC--CCEEEETTCCEEEEEEEEEESCCEEEEEE-TTEECCCBTTEEEEECGGGEEEEEES----SCCGGGCEE
T ss_pred CCCEEEEcC--CceEecCCCEEEEEEEEEEcCCCEEEEEE-CCEECCCCCCEEEEECCCCEEEEEEc----cCCcCCCEE
Confidence 356666665 56788999999999999999999999999 555544321100 00 011111 244677888
Q ss_pred EEeeecc
Q psy16421 121 LECISEA 127 (151)
Q Consensus 121 l~C~~~g 127 (151)
..|.+..
T Consensus 77 Y~C~a~N 83 (99)
T 1u2h_A 77 YTCKAVN 83 (99)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9998864
No 458
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=98.17 E-value=2.6e-06 Score=47.33 Aligned_cols=35 Identities=11% Similarity=0.245 Sum_probs=28.4
Q ss_pred CceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 108 SQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 108 ~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+....+..|+++.|+|.+.|.|. |+|+|||..+..
T Consensus 6 p~~~v~~~G~~v~L~C~~~g~P~--i~W~kdg~~l~~ 40 (82)
T 3r08_E 6 IEYKVSISGTSVELTCPLDSDEN--LKWEKNGQELPQ 40 (82)
T ss_dssp CCCEEEEETTEEEEECSSCCCSS--CEEEETTEECTT
T ss_pred CceeEEEcCCeEEEEEECCCCCc--EEEEECCEECcC
Confidence 34455778999999999999984 999999877653
No 459
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=98.16 E-value=6.7e-06 Score=46.73 Aligned_cols=73 Identities=12% Similarity=0.056 Sum_probs=49.5
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCCCCCeeeeCC-----ceeEeecCCcEEE
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVPPIVKIPS-----QLIGAHEGQQLVL 121 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~-----~~~~~~~g~~~~l 121 (151)
.+|.|...+ .++.+.+|+.+.|.|.+.+ +.+.+.|++ +++.+....+ -.+.... .-..+...+....
T Consensus 4 ~~~~~~~~~--~~~~v~~G~~v~l~C~v~~-~~~~v~W~k-~g~~i~~~~~----~~i~~~g~~~~L~I~~v~~~D~G~Y 75 (93)
T 1waa_A 4 ALIEVEKPL--YGVEVFVGETAHFEIELSE-PDVHGQWKL-KGQPLAASPD----CEIIEDGKKHILILHNCQLGMTGEV 75 (93)
T ss_dssp CCCCEEECC--CCEEEETTSCEEEEEEESS-SSCCCEEEE-TTEECCCBTT----EEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CCcEeeccC--cceEEeCCCCEEEEEEECC-CCCeEEEEE-CCEECcCCCC----EEEEEECCEEEEEECCCChhhCEEE
Confidence 567777776 6789999999999999987 557899999 6766653221 1111111 1112456788889
Q ss_pred Eeeecc
Q psy16421 122 ECISEA 127 (151)
Q Consensus 122 ~C~~~g 127 (151)
.|.+..
T Consensus 76 ~C~a~n 81 (93)
T 1waa_A 76 SFQAAN 81 (93)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 998764
No 460
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=98.16 E-value=3.9e-06 Score=49.19 Aligned_cols=43 Identities=19% Similarity=0.199 Sum_probs=35.8
Q ss_pred CCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 100 VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 100 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
.||.|...+....+.+|+++.|.|.+.+. |.+.|+|++..+..
T Consensus 18 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~ 60 (113)
T 2edh_A 18 LPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRD 60 (113)
T ss_dssp SCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCC
T ss_pred CCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCC
Confidence 45678777888889999999999999775 68999999876653
No 461
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.16 E-value=8.7e-07 Score=50.69 Aligned_cols=76 Identities=22% Similarity=0.413 Sum_probs=50.2
Q ss_pred cCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCC--CCCeeeeCCceeEeecCCcEEEE
Q psy16421 45 SSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNT--VPPIVKIPSQLIGAHEGQQLVLE 122 (151)
Q Consensus 45 ~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~--~~p~~~~~~~~~~~~~g~~~~l~ 122 (151)
+..+|.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|++ +++.+....... ....+.+. .+...+.....
T Consensus 8 ~~~~P~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~g~~~~~~~~~~~~~~~~L~i~----~v~~~D~G~Y~ 80 (99)
T 2yr3_A 8 MEVAPSFSSVL--KDCAVIEGQDFVLQCSVRGTPVPRITWLL-NGQPIQYARSTCEAGVAELHIQ----DALPEDHGTYT 80 (99)
T ss_dssp CCEEEEEEECC--CCEEECTTCCEEEECEEEEESCCCCEEEE-SSSBCSSCCCEEETTEEEEEEC----SCCTTCCBCEE
T ss_pred cccCCceeecC--CCCEEeCCCeEEEEEEEeeeCCCeEEEEE-CCEECcccceEeeCCeEEEEEC----CCChhhCEEEE
Confidence 34577777766 57889999999999999999999999999 555543211000 00111111 23456777888
Q ss_pred eeecc
Q psy16421 123 CISEA 127 (151)
Q Consensus 123 C~~~g 127 (151)
|.+..
T Consensus 81 C~a~N 85 (99)
T 2yr3_A 81 CLAEN 85 (99)
T ss_dssp EEEEC
T ss_pred EEEEE
Confidence 98754
No 462
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=98.15 E-value=5e-06 Score=56.07 Aligned_cols=29 Identities=21% Similarity=0.515 Sum_probs=18.1
Q ss_pred eecCCcEEEEeeeccc-CCC-eeEEEcCCce
Q psy16421 113 AHEGQQLVLECISEAY-PKS-VNYWTREKGD 141 (151)
Q Consensus 113 ~~~g~~~~l~C~~~g~-p~~-~~~W~k~~~~ 141 (151)
+.+|+.+.|.|.+.|. |.| .++|+|++..
T Consensus 145 ~~~g~~v~L~C~~~g~~P~pi~v~W~k~g~~ 175 (257)
T 3bn9_D 145 STSGGTAALGCLVKDYFPEPVTVSWNSGALT 175 (257)
T ss_dssp --------CCCEEEEEBSSCCEEEETTTTCC
T ss_pred ccCCCcEEEEEEEeeEECCCcEEEEeeCCCc
Confidence 4578999999999985 877 7999998764
No 463
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=97.44 E-value=2.7e-07 Score=59.38 Aligned_cols=77 Identities=13% Similarity=0.181 Sum_probs=45.7
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeeecC-CCC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAASG-SPP 79 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g-~~~ 79 (151)
|.+++.+|+|.|.|.+.+... .......|+|.... ...+|.+.... . ..+.+.|.|.+.| .|.
T Consensus 76 I~~v~~~DsG~Y~C~~~~~~~-~fg~gT~L~V~~~~--------~~~~P~V~~~~--~-----~~~~vtL~C~~~gf~P~ 139 (185)
T 3c6l_A 76 IADSQPGDSATYFCAASDNRI-FFGDGTQLVVKPNI--------QNPEPAVYQLK--D-----PRSQDSTLCLFTDFDSQ 139 (185)
Confidence 678999999999999876211 11222345543110 00123333221 0 1127899999877 789
Q ss_pred CeEEEEeCCeeeEec
Q psy16421 80 PSIMWRREGGEMITN 94 (151)
Q Consensus 80 ~~~~W~~~~~~~~~~ 94 (151)
|.+.|.. +......
T Consensus 140 p~v~~~~-~~~~~~~ 153 (185)
T 3c6l_A 140 INVPKTM-ESGTFIT 153 (185)
Confidence 9999987 5555443
No 464
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=98.15 E-value=2.8e-06 Score=51.20 Aligned_cols=32 Identities=9% Similarity=0.099 Sum_probs=28.0
Q ss_pred ecCCcEEEEeeecccCCCeeEEEcCCceeccC
Q psy16421 114 HEGQQLVLECISEAYPKSVNYWTREKGDMIAN 145 (151)
Q Consensus 114 ~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~~ 145 (151)
..+..+.|.|.+.|+|.|.|+|+|||..+..+
T Consensus 13 ~~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~ 44 (126)
T 1he7_A 13 VEMHHWCIPFSVDGQPAPSLRWLFNGSVLNET 44 (126)
T ss_dssp CCCCEEEEEEEECCSSCCEEEEEETTEECCCC
T ss_pred ccCccEEEEEEEeeeCCCeEEEEECCEECCCC
Confidence 46789999999999999999999998777543
No 465
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.13 E-value=1.2e-05 Score=53.36 Aligned_cols=30 Identities=23% Similarity=0.457 Sum_probs=24.9
Q ss_pred CceEeecCCeEEEEeeecCC--CCCeEEEEeC
Q psy16421 58 SDIMVREGSNVSMRCAASGS--PPPSIMWRRE 87 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~--~~~~~~W~~~ 87 (151)
..+.+.+|+++.|.|.+.+. +.+.+.|++.
T Consensus 9 ~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~ 40 (242)
T 1hxm_B 9 ISSTKTLSKTARLECVVSGITISATSVYWYRE 40 (242)
T ss_dssp SEEEEETTCCEEEEEEEESSCTTTSCEEEEEE
T ss_pred ceEEecCCCcEEEEEEeCCccccCceEEEEEe
Confidence 45778899999999998775 5678999984
No 466
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=98.11 E-value=3.8e-06 Score=47.79 Aligned_cols=74 Identities=19% Similarity=0.320 Sum_probs=49.1
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCCCCCeeeeCC-----ceeEeecCCcEEE
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVPPIVKIPS-----QLIGAHEGQQLVL 121 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~-----~~~~~~~g~~~~l 121 (151)
.+|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++ ++..+....+ ..+.... ....+...+....
T Consensus 5 ~~P~i~~~~--~~~~v~~G~~~~l~C~~~g~p~p~v~W~~-~g~~~~~~~~----~~~~~~~~~~~L~i~~~~~~d~G~Y 77 (99)
T 3puc_A 5 SKPVIVTGL--QDTTVSSDSVAKFAVKATGEPRPTAIWTK-DGKAITQGGK----YKLSEDKGGFFLEIHKTDTSDSGLY 77 (99)
T ss_dssp EEEEEEECC--CCEEEESSSCEEEEEEEEEESCCEEEEEE-TTEECCSSSS----EEEEEETTEEEEEECSCCGGGCEEE
T ss_pred CCCEEEecC--ccEEEeCCCcEEEEEEEEecCCCEEEEEE-CCEECcCCCC----EEEEEeCCEEEEEECCCCcccCEEE
Confidence 456666666 56788999999999999999999999999 5655543211 1111110 0112345778889
Q ss_pred Eeeecc
Q psy16421 122 ECISEA 127 (151)
Q Consensus 122 ~C~~~g 127 (151)
.|.+..
T Consensus 78 ~C~a~n 83 (99)
T 3puc_A 78 TCTVKN 83 (99)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 998863
No 467
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.11 E-value=4.9e-06 Score=48.47 Aligned_cols=44 Identities=27% Similarity=0.511 Sum_probs=36.7
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEe
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMIT 93 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~ 93 (151)
.+|.+...+ ..+.+.+|+.+.|.|.+.|.|.+.+.|++ +++.+.
T Consensus 7 ~~P~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~v~W~k-~g~~~~ 50 (110)
T 2dm2_A 7 GAPFFEMKL--KHYKIFEGMPVTFTCRVAGNPKPKIYWFK-DGKQIS 50 (110)
T ss_dssp CCCCBSSCC--CCEEEETTCCEEEEEEBCCSSCCEEEEEC-SSCBCC
T ss_pred CCCEEEecC--cCeEEeCCCeEEEEEEEEecCCCEEEEEE-CCEECC
Confidence 567777666 67889999999999999999999999999 565554
No 468
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.10 E-value=2.3e-06 Score=50.99 Aligned_cols=39 Identities=13% Similarity=0.198 Sum_probs=33.6
Q ss_pred CCeeeeCCceeEeecCCcEEEEeeeccc---CCCeeEEEcCC
Q psy16421 101 PPIVKIPSQLIGAHEGQQLVLECISEAY---PKSVNYWTREK 139 (151)
Q Consensus 101 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~---p~~~~~W~k~~ 139 (151)
.+.|...+..+.+.+|+++.|.|.+.|. |.|.|+|+|++
T Consensus 12 ~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk 53 (118)
T 2edn_A 12 TGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGK 53 (118)
T ss_dssp SSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETT
T ss_pred cceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCC
Confidence 4567777888999999999999999875 78999999974
No 469
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=98.10 E-value=4.1e-05 Score=51.98 Aligned_cols=86 Identities=12% Similarity=0.195 Sum_probs=54.5
Q ss_pred CceEeecCCeEEEEeee-cCCC---CCeEEEEeCCeeeEecccC-----------------------------------C
Q psy16421 58 SDIMVREGSNVSMRCAA-SGSP---PPSIMWRREGGEMITNSFN-----------------------------------N 98 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~-~g~~---~~~~~W~~~~~~~~~~~~~-----------------------------------~ 98 (151)
+...+..|+.+.|.|.+ .|.| +..++|+| |+..+..... .
T Consensus 10 ~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyK-DG~~IsGaT~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs~VtVT~ 88 (304)
T 3shs_A 10 NKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTK-DDQPHENNTATLTVADATSENAGSYKVTVQDTDTMTSVESEVFLME 88 (304)
T ss_dssp SCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEE-TTEECSCCSSEEEESSCCGGGCEEEEEEEEETTTCCEEECCCEEEC
T ss_pred CCccccCCCCEEEEEEecCCCCCCCCceEEEEE-CCccccCCcceEEeeeccccCCeEEEEEEEECCCCeeeeeeEEEec
Confidence 34456789999999996 4566 45899999 5554432111 0
Q ss_pred CCCCeeeeC-CceeEeecCCcEEEEeee--cc-cC-----CCeeEEEcCCceecc
Q psy16421 99 TVPPIVKIP-SQLIGAHEGQQLVLECIS--EA-YP-----KSVNYWTREKGDMIA 144 (151)
Q Consensus 99 ~~~p~~~~~-~~~~~~~~g~~~~l~C~~--~g-~p-----~~~~~W~k~~~~~~~ 144 (151)
...+.+... +....+..|..+.|.+.+ .| .| ...+.|+||+..+..
T Consensus 89 ~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~Isg 143 (304)
T 3shs_A 89 EAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDT 143 (304)
T ss_dssp BCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEES
T ss_pred cCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccC
Confidence 011122222 444555678899999987 54 44 357999999876644
No 470
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=98.10 E-value=4.5e-06 Score=48.18 Aligned_cols=41 Identities=15% Similarity=0.150 Sum_probs=33.8
Q ss_pred CCCeeeeCCceeEeecCCcEEEEeeecccCCCeeEEEcCCc
Q psy16421 100 VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKG 140 (151)
Q Consensus 100 ~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~ 140 (151)
.+|.+...+....+.+|+++.|.|.+.+.|.+.+.|+|++.
T Consensus 5 ~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~ 45 (108)
T 3m45_A 5 GSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQ 45 (108)
T ss_dssp ---CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTC
T ss_pred cCCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCC
Confidence 35566666778889999999999999999999999999765
No 471
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=98.08 E-value=1.3e-06 Score=50.60 Aligned_cols=31 Identities=23% Similarity=0.222 Sum_probs=24.8
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEE
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIV 32 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v 32 (151)
|.+++.+|+|.|+|.|.|..| .....+.|.|
T Consensus 66 I~~v~~~D~G~Y~C~A~N~~G-~~~~~~~l~V 96 (103)
T 1wwb_X 66 LDNPTHMNNGDYTLIAKNEYG-KDEKQISAHF 96 (103)
T ss_dssp EESCCGGGCEEEEEEEECSSC-EEEEEEEECC
T ss_pred ECCCCcccCEEEEEEEEeCCC-cEeEEEEEEE
Confidence 467899999999999999998 4555555544
No 472
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.07 E-value=2.7e-06 Score=48.52 Aligned_cols=31 Identities=26% Similarity=0.381 Sum_probs=25.1
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEE
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIV 32 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v 32 (151)
|.+++.+|+|.|+|.+.|..| .....+.|.|
T Consensus 66 i~~v~~~D~G~Y~C~a~n~~g-~~~~~~~l~V 96 (98)
T 1gl4_B 66 IRNVQPSDAGTYVCTGSNMFA-MDQGTATLHV 96 (98)
T ss_dssp ECSCCGGGCEEEEEEEECSSC-EEEEEEEEEE
T ss_pred EeCCChhhCEEEEEEecCCCC-ccccEEEEEE
Confidence 578999999999999999988 4555566555
No 473
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.07 E-value=9.4e-06 Score=46.07 Aligned_cols=70 Identities=20% Similarity=0.448 Sum_probs=49.3
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCCCCCeeeeCCceeEeecCCcEEEEeeec
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISE 126 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 126 (151)
.+|.+...+ ....+.+|+.+.|.|.+.+.|.+.+.|++ +++.+... ....+.+. .+...+.....|.+.
T Consensus 9 ~~~~i~~~p--~~~~v~~G~~v~l~C~~~g~p~~~v~W~k-~~~~~~~~----~~~~L~i~----~v~~~d~G~Y~C~a~ 77 (96)
T 2ens_A 9 EEVQLVVEP--EGGAVAPGGTVTLTCEVPAQPSPQIHWMK-DGVPLPLP----PSPVLILP----EIGPQDQGTYSCVAT 77 (96)
T ss_dssp CSCCCEEES--TTSEECTTCEEEEECCCSSCSSCCCCCEE-SSSBCSSC----CCSEEEEE----SCCTTTCEEEECEEC
T ss_pred CCCEEEECC--CCCEEcCCCeEEEEEEEccCCCCEEEEEE-CCEECcCC----CCCEEEEC----CCCcccCEEEEEEEE
Confidence 456666655 46778899999999999999999999999 56554321 11223322 245678888999986
Q ss_pred c
Q psy16421 127 A 127 (151)
Q Consensus 127 g 127 (151)
.
T Consensus 78 n 78 (96)
T 2ens_A 78 H 78 (96)
T ss_dssp C
T ss_pred e
Confidence 5
No 474
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=98.06 E-value=7.7e-05 Score=48.31 Aligned_cols=84 Identities=14% Similarity=0.160 Sum_probs=50.9
Q ss_pred CceEeecCCeEEEEeeecCCCCC-eEEEEeCCee-eEecc------------c----C------------------CCCC
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPP-SIMWRREGGE-MITNS------------F----N------------------NTVP 101 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~-~~~W~~~~~~-~~~~~------------~----~------------------~~~~ 101 (151)
....+.+|+++.|.|.+.. +.+ .+.|.-.-++ ..... . . ++.+
T Consensus 10 ~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~g~~~~~~~ls~vs~d~~~~~C~~~c~~~~~~~~v~l~Vy~~ 88 (196)
T 3bn3_B 10 RVAFVERGGSLWLNCSTNC-PRPERGGLETSLRRNGTQRGLRWLARQLVDIREPETQPVCFFRCARRTLQARGLIRTFQR 88 (196)
T ss_dssp SEEEEETTEEEEEEEEECC-SSCSEEEEECSSEEEEEEEETTEEEEEEEEECSSEECCEEEEEETTEEEEEECEEEEEBC
T ss_pred CCcEEcCCCeEEEEEeCCC-CCCCccEEEEccCCeeEccccCceEEEEEEEccCCCceEEEEECCCCceEEEEEEEEecC
Confidence 3466889999999999865 444 5666321111 11110 0 0 1222
Q ss_pred C-eeeeCCceeEeecCCcEEEEeeecc-cCCCe--eEEEcCCcee
Q psy16421 102 P-IVKIPSQLIGAHEGQQLVLECISEA-YPKSV--NYWTREKGDM 142 (151)
Q Consensus 102 p-~~~~~~~~~~~~~g~~~~l~C~~~g-~p~~~--~~W~k~~~~~ 142 (151)
| ...+.+....+.+|+.++|.|.+.| .|... |.|+|++..+
T Consensus 89 P~~v~i~~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l 133 (196)
T 3bn3_B 89 PDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQEL 133 (196)
T ss_dssp CCCCEECCCCSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEE
T ss_pred CCcCEEccCCccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEe
Confidence 2 2333333233789999999999987 55544 8999987655
No 475
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=98.06 E-value=5.1e-06 Score=51.55 Aligned_cols=78 Identities=19% Similarity=0.302 Sum_probs=52.5
Q ss_pred eecCCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCC------CCCeeeeCCceeEeecC
Q psy16421 43 YTSSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNT------VPPIVKIPSQLIGAHEG 116 (151)
Q Consensus 43 ~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~------~~p~~~~~~~~~~~~~g 116 (151)
+.+..+|.+...+ ..+.+.+|+.+.|.|.+.|.|.|.+.|++ +++.+....+.. ....+.+. .+...
T Consensus 36 ~~v~~~P~~~~~~--~~~~v~~G~~v~L~C~~~g~P~p~v~W~k-~g~~~~~~~~~~~~~~~~~~~~L~I~----~v~~~ 108 (154)
T 1fhg_A 36 EKPHVKPYFTKTI--LDMEVVEGSAARFDCKVEGYPDPEVMWFK-DDNPVKESRHFQIDYDEEGNCSLTIS----EVCGD 108 (154)
T ss_dssp CCCCEEEEEEECC--CCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCSSSEEEEECTTCEEEEEES----SCCGG
T ss_pred ccCCCCCeEEccC--CcEEEeCCCeEEEEEEEEEecCCEEEEEE-CCEECCCCCcEEEEECCCCeEEEEEC----CCChh
Confidence 3445678888776 56889999999999999999999999999 565554322100 00011111 24456
Q ss_pred CcEEEEeeecc
Q psy16421 117 QQLVLECISEA 127 (151)
Q Consensus 117 ~~~~l~C~~~g 127 (151)
+.....|.+..
T Consensus 109 D~G~Y~C~a~N 119 (154)
T 1fhg_A 109 DDAKYTCKAVN 119 (154)
T ss_dssp GCEEEEEEEEE
T ss_pred cCEEEEEEEEE
Confidence 77888998753
No 476
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.05 E-value=6.2e-06 Score=48.22 Aligned_cols=33 Identities=21% Similarity=0.416 Sum_probs=28.3
Q ss_pred eEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 111 IGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 111 ~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
..+.+|+++.|.|.+. .|.+.+.|+|+|..+..
T Consensus 23 ~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~ 55 (113)
T 2cpc_A 23 VAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVE 55 (113)
T ss_dssp EEEETTCCEEEEEEES-CTTCCCEEEETTEECCC
T ss_pred EEEEcCCeEEEEEEec-CCCCeEEEEECCEECcc
Confidence 5788999999999995 78899999999876643
No 477
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.02 E-value=7.3e-06 Score=48.36 Aligned_cols=44 Identities=34% Similarity=0.736 Sum_probs=36.5
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEe
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMIT 93 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~ 93 (151)
.+|.+...+ ..+.+.+|+.+.|.|.+.|.|.+.+.|++ +++.+.
T Consensus 7 ~pP~i~~~p--~~~~v~~G~~v~l~C~~~g~p~p~i~W~k-~g~~~~ 50 (118)
T 2eo9_A 7 GPPVIRQGP--VNQTVAVDGTFVLSCVATGSPVPTILWRK-DGVLVS 50 (118)
T ss_dssp CSCCCSBCC--CCEEEETTCEEEEECBCCCSSCCEEEEEE-SSSBCC
T ss_pred CCCEEEcCC--CCEEEcCCCeEEEEEEEEecCCCEEEEEE-CCEECc
Confidence 567776666 57889999999999999999999999999 565544
No 478
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=98.02 E-value=2.9e-05 Score=51.43 Aligned_cols=74 Identities=16% Similarity=0.234 Sum_probs=42.9
Q ss_pred CccccccCCeEEEEEEEcCCC-----CC--CccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEee
Q psy16421 1 MTEVSREHMGAYLCIASNGVP-----PS--VSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCA 73 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~-----~~--~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~ 73 (151)
|.+++.+|+|.|.|.+.+..+ .. ......|.|.... ....+|.+.. .. ....|.|.
T Consensus 79 I~~v~~~Dsg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~-------~~~~~P~v~~---------~~-~~~~L~C~ 141 (229)
T 1hxm_A 79 ILAPSERDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRS-------QPHTKPSVFV---------MK-NGTNVACL 141 (229)
T ss_dssp ESSCCGGGCEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCS-------CCCBCCEEEE---------EE-ETTEEEEE
T ss_pred ECcCCHhHCeEEEEEEecCCCcccccchhhcCccEEEEEeccC-------CCCcCCcEEE---------cC-CCCeEEEE
Confidence 678999999999999987631 01 1123455554100 0012333322 11 12489999
Q ss_pred ecCC-CCC-eEEEEeCCeeeEe
Q psy16421 74 ASGS-PPP-SIMWRREGGEMIT 93 (151)
Q Consensus 74 ~~g~-~~~-~~~W~~~~~~~~~ 93 (151)
+.+. |.+ .+.|++ + +.+.
T Consensus 142 ~~g~~P~~i~v~W~~-~-~~~~ 161 (229)
T 1hxm_A 142 VKEFYPKDIRINLVS-S-KKIT 161 (229)
T ss_dssp EESCBSSCCEEEEEC-S-SEEE
T ss_pred EEEEeCCCEEEEEec-C-CEEe
Confidence 9874 543 899999 4 5544
No 479
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=98.01 E-value=8.7e-06 Score=47.01 Aligned_cols=74 Identities=26% Similarity=0.588 Sum_probs=50.3
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCCCC--C---eeeeCCceeEeecCCcEEE
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVP--P---IVKIPSQLIGAHEGQQLVL 121 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~~~--p---~~~~~~~~~~~~~g~~~~l 121 (151)
.+|.+...+ ..+.+.+|+.+.|.|.+.+.|.+.+.|++ +++.+....+.... - .+.+. .+...+....
T Consensus 12 ~~P~~~~~~--~~~~v~~G~~v~l~C~~~g~p~p~i~W~~-~~~~~~~~~~~~~~~~~~~~~L~i~----~~~~~D~G~Y 84 (107)
T 3irg_B 12 SPPCFLRFP--RPVRVVSGAEAELKCVVLGEPPPVVVWEK-GGQQLAASERLSFPADGAEHGLLLT----AALPTDAGVY 84 (107)
T ss_dssp EEEEEEECC--CCEEEETTSCEEEEEEEEEESCCEEEEEE-TTEECCCCSSEECCEETTEEEEEES----SCCGGGCEEE
T ss_pred CCCeeEcCC--ccEEEeCCCeEEEEEEEeecCCCEEEEEE-CCeECCCCCcEEEEeCCCEEEEEEc----cCCHHhCEEE
Confidence 567777766 57889999999999999999999999999 56555432210000 0 12221 2345678889
Q ss_pred Eeeecc
Q psy16421 122 ECISEA 127 (151)
Q Consensus 122 ~C~~~g 127 (151)
.|.+..
T Consensus 85 ~C~a~n 90 (107)
T 3irg_B 85 VCRARN 90 (107)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 998864
No 480
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.01 E-value=1.4e-05 Score=47.18 Aligned_cols=44 Identities=16% Similarity=0.195 Sum_probs=36.2
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecc
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNS 95 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~ 95 (151)
.+|.|...+ .+..+.+|+.+.|.|.+.+ .+.+.|++ |++++...
T Consensus 7 p~~~~~~~l--~d~~v~eG~~a~f~C~vs~--~p~v~W~k-nG~~l~~~ 50 (112)
T 2e6q_A 7 GTARLVAGL--EDVQVYDGEDAVFSLDLST--IIQGTWFL-NGEELKSN 50 (112)
T ss_dssp SCCCEEECC--CCEEEETTCEEEEEEEESS--CCCCEEEE-SSCBCCSS
T ss_pred CCcEEecCC--CCeEEcCCCcEEEEEEECC--CCeEEEEE-CCEECccC
Confidence 456777776 7899999999999999987 77899999 67777643
No 481
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=98.01 E-value=5.2e-05 Score=52.10 Aligned_cols=85 Identities=19% Similarity=0.274 Sum_probs=51.1
Q ss_pred CceEeecCCeEEEEeeecCCCCCe-EEEEeCCe-eeE------------eccc--C--------------------CCCC
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPS-IMWRREGG-EMI------------TNSF--N--------------------NTVP 101 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~-~~W~~~~~-~~~------------~~~~--~--------------------~~~~ 101 (151)
....+.+|+++.|.|.+.. +.|. +.|.-... ..+ .... . +..+
T Consensus 7 ~~~~V~~G~sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~g~~~~~~~l~~v~~~~~y~C~~~~~~~~~~~~v~l~V~~~ 85 (291)
T 1mq8_A 7 SKVILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLPGNNRKVYELSNVQEDSQPMCYSNCPDGQSTAKTFLTVYWT 85 (291)
T ss_dssp SEEEECTTCEEEEEEEECC-SSCSEEEEECSSCCCCCCCSCSSEEEEEEESCCSCCCCEEEEECSSCEEEEECEEEECBC
T ss_pred CccEEcCCCeEEEEEeCCC-CCCccceEEecCCCcccccCCCceEEEEEEecccCCeEEEEEEcCCccEEEEEEEEEecC
Confidence 3567889999999999864 5444 78852111 111 0000 0 1222
Q ss_pred C-eeeeCCceeEeecCCcEEEEeeeccc-CCC--eeEEEcCCceec
Q psy16421 102 P-IVKIPSQLIGAHEGQQLVLECISEAY-PKS--VNYWTREKGDMI 143 (151)
Q Consensus 102 p-~~~~~~~~~~~~~g~~~~l~C~~~g~-p~~--~~~W~k~~~~~~ 143 (151)
| .+.+......+.+|+.+.|.|.+.|. |.. .|+|+|++..+.
T Consensus 86 P~~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~ 131 (291)
T 1mq8_A 86 PERVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELK 131 (291)
T ss_dssp CSCCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEE
T ss_pred CCCCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEee
Confidence 2 22222222347889999999999874 443 489999986553
No 482
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=98.00 E-value=1e-05 Score=46.02 Aligned_cols=41 Identities=20% Similarity=0.425 Sum_probs=32.3
Q ss_pred CCeeeeC-CceeEeecCCcEEEEeeec-ccCCCeeEEEcCCce
Q psy16421 101 PPIVKIP-SQLIGAHEGQQLVLECISE-AYPKSVNYWTREKGD 141 (151)
Q Consensus 101 ~p~~~~~-~~~~~~~~g~~~~l~C~~~-g~p~~~~~W~k~~~~ 141 (151)
++.+... +....+.+|+++.|.|.+. |.|.+.+.|+|++..
T Consensus 9 ~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~ 51 (98)
T 1gl4_B 9 PIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNG 51 (98)
T ss_dssp CEEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGB
T ss_pred CcEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCC
Confidence 3444443 5667899999999999998 689999999997543
No 483
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=98.00 E-value=7.3e-06 Score=55.43 Aligned_cols=72 Identities=15% Similarity=0.411 Sum_probs=43.1
Q ss_pred CccccccCCeEEEEEEEc-------CCC-------------CC----CccceEEEEeccccceeEEeecCCCCeeEe-CC
Q psy16421 1 MTEVSREHMGAYLCIASN-------GVP-------------PS----VSKRIMLIVQCQYFSKLYIYTSSMPPDILD-YP 55 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~-------~~~-------------~~----~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~-~~ 55 (151)
|.+++.+|+|.|.|.+.+ ..+ .. ......|.|.. ....+|.+.. .+
T Consensus 106 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~---------~~~~~P~v~~~~~ 176 (267)
T 3u1s_H 106 LRGLTADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSS---------ASTKGPSVFPLAP 176 (267)
T ss_dssp ECSCCGGGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECC---------CCCBCCEEEEECC
T ss_pred ECCCChhhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecC---------CCCCCCEEEEecC
Confidence 678999999999999862 100 00 11223444431 1123455542 32
Q ss_pred CCCceEeecCCeEEEEeeecC-CC-CCeEEE
Q psy16421 56 TSSDIMVREGSNVSMRCAASG-SP-PPSIMW 84 (151)
Q Consensus 56 ~~~~~~~~~g~~~~l~C~~~g-~~-~~~~~W 84 (151)
.....+|+.+.|.|.+.+ .| .+.+.|
T Consensus 177 ---~~~~~~g~~~~l~C~~~~~~p~~~~v~W 204 (267)
T 3u1s_H 177 ---SSKSTSGGTAALGCLVKDYFPEPVTVSW 204 (267)
T ss_dssp ---CGGGEETTEEEEEEEEEEEBSSCCEEEE
T ss_pred ---CcccCCCCcEEEEEEEeEEECCCeEEEE
Confidence 122357899999999876 45 567899
No 484
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=97.99 E-value=6.9e-05 Score=50.88 Aligned_cols=29 Identities=28% Similarity=0.522 Sum_probs=24.1
Q ss_pred CceEeecCCeEEEEeeecCC--CCCeEEEEe
Q psy16421 58 SDIMVREGSNVSMRCAASGS--PPPSIMWRR 86 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~--~~~~~~W~~ 86 (151)
..+.+.+|+++.|.|.+.+. +.+.+.|++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r 38 (280)
T 3fku_X 8 GAEVKKPGSSVKVSCTSSEVTFSSFAISWVR 38 (280)
T ss_dssp CCCEECTTCCEEEEEEECCSCCTTSCEEECC
T ss_pred CCEEECCCCcEEEEEEeeccCCCCeEEEEEE
Confidence 45778899999999998774 567899987
No 485
>1ntl_A CRRY-IG; immunology, complement, glycoprotein, SCR, CCP, immune system; NMR {Mus musculus}
Probab=97.99 E-value=3.5e-05 Score=57.42 Aligned_cols=30 Identities=13% Similarity=0.374 Sum_probs=24.4
Q ss_pred eecCCcEEEEeeecc-cCC-CeeEEEcCCcee
Q psy16421 113 AHEGQQLVLECISEA-YPK-SVNYWTREKGDM 142 (151)
Q Consensus 113 ~~~g~~~~l~C~~~g-~p~-~~~~W~k~~~~~ 142 (151)
...|+.+.|.|.+.| +|. ..|+|+|||..+
T Consensus 461 ~~~~~~~~L~C~v~gfyP~~i~v~W~k~g~~~ 492 (551)
T 1ntl_A 461 QMAKDKVSLTCMITDFFPEDITVEWQWNGQPA 492 (551)
T ss_pred hccCCceEEEEEEEEeECCCCEEEEEECCEEc
Confidence 456899999999999 565 359999998765
No 486
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=97.98 E-value=5.7e-06 Score=49.42 Aligned_cols=31 Identities=23% Similarity=0.465 Sum_probs=25.1
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEe
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~ 33 (151)
|.+++.+|+|.|+|.+.|. + .....+.|.|.
T Consensus 70 I~~v~~~DsG~Y~C~a~n~-g-~~~~~~~l~V~ 100 (124)
T 3rbg_A 70 VPNVTLQDEGVYKCLHYSD-S-VSTKEVKVIVL 100 (124)
T ss_dssp ESSCCGGGCEEEEEEEESS-S-EEEEEEEEEEE
T ss_pred ECCCChHHCEEEEEEEEcC-C-CCcEEEEEEEE
Confidence 5789999999999999998 5 55666666664
No 487
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=97.98 E-value=2.4e-05 Score=50.76 Aligned_cols=104 Identities=20% Similarity=0.315 Sum_probs=56.2
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEeccccceeEEeecCCCCeeEeCCCCCceEeecCCeEEEEeee----cC
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYFSKLYIYTSSMPPDILDYPTSSDIMVREGSNVSMRCAA----SG 76 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~g~~~~l~C~~----~g 76 (151)
|.+++.+|+|.|+|.|.|..| .....+.|.|. .+|...... .....+.++.+.|.. .+
T Consensus 80 i~~~~~~d~G~Y~C~a~n~~g-~~~~~~~l~v~-------------~~P~~p~~~----~~~~~~~~~~l~w~~p~~~~~ 141 (215)
T 3mtr_A 80 VTPDSENDFGNYNCTAVNRIG-QESLEFILVQA-------------DTPSSPSID----QVEPYSSTAQVQFDEPEATGG 141 (215)
T ss_dssp ECCCSGGGCEEEEEEEECSSC-EEEEEEEEEEC-------------CCCCCCEEE----EEEEETTEEEEEEECCSCCCS
T ss_pred EecCChhhCeEEEEEEEECCC-ceEEEEEEEEC-------------CCCCCCcce----EEEEecceEEEEEecCCccCC
Confidence 568899999999999999998 44555565553 223221111 112346778888863 22
Q ss_pred CCCC--eEEEEeCCeeeEeccc-CC---CCCCeeeeCCceeEeecCCcEEEEeeec
Q psy16421 77 SPPP--SIMWRREGGEMITNSF-NN---TVPPIVKIPSQLIGAHEGQQLVLECISE 126 (151)
Q Consensus 77 ~~~~--~~~W~~~~~~~~~~~~-~~---~~~p~~~~~~~~~~~~~g~~~~l~C~~~ 126 (151)
.|.. .+.|.+.+........ .. .....+.+ ..+..++...+.|.+.
T Consensus 142 ~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i----~~L~~~~~y~~~~~A~ 193 (215)
T 3mtr_A 142 VPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTI----VGLKPETTYAVRLAAL 193 (215)
T ss_dssp SCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEE----ECCCTTCEEEEEEEEE
T ss_pred CceEEEEEEEEECCCCcccccccccccccccccEEE----CCCCCCCEEEEEEEEE
Confidence 3332 3667773321110000 00 00012222 2356788899999975
No 488
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=97.97 E-value=3.9e-06 Score=59.21 Aligned_cols=32 Identities=19% Similarity=0.394 Sum_probs=27.9
Q ss_pred CceEeecCCeEEEEeeecCCCCCeEEEEeCCee
Q psy16421 58 SDIMVREGSNVSMRCAASGSPPPSIMWRREGGE 90 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~ 90 (151)
..+.+.+|+++.|.|.+.| |.|.+.|++.++.
T Consensus 254 ~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~ 285 (361)
T 2xot_A 254 SAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNE 285 (361)
T ss_dssp CCCEEETTCCEEECCCCSS-TTCEEEEECTTSC
T ss_pred cCceecCCCeEEEEeEeeC-CCCeEEEEeCCCe
Confidence 5678899999999999999 9999999995543
No 489
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.96 E-value=8.5e-06 Score=48.09 Aligned_cols=76 Identities=18% Similarity=0.301 Sum_probs=49.1
Q ss_pred CCCCeeEeCC-CCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCCCCCeeeeCCc-----eeEeecCCcE
Q psy16421 46 SMPPDILDYP-TSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVPPIVKIPSQ-----LIGAHEGQQL 119 (151)
Q Consensus 46 ~~~p~~~~~~-~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~-----~~~~~~g~~~ 119 (151)
..+|.+.... ....+.+.+|+.+.|.|.+.|.|.|.+.|++ +++.+.... ..+..... ...+...+..
T Consensus 19 ~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k-~g~~l~~~~-----~~~~~~~~~~~L~i~~~~~~D~G 92 (118)
T 2e7c_A 19 AEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTK-GGAPLDTSR-----VHVRTSDFDTVFFVRQAARSDSG 92 (118)
T ss_dssp SEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEE-TTEECCCSS-----CEEEECSSEEEEEESSCCTTTCE
T ss_pred ccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEE-CCEECCCCc-----EEEEECCCeEEEEECCCChhcCE
Confidence 3466664421 1256788899999999999999999999999 566554111 11111111 1124567888
Q ss_pred EEEeeecc
Q psy16421 120 VLECISEA 127 (151)
Q Consensus 120 ~l~C~~~g 127 (151)
...|.+..
T Consensus 93 ~Y~C~a~N 100 (118)
T 2e7c_A 93 EYELSVQI 100 (118)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEe
Confidence 99998754
No 490
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=97.96 E-value=7.2e-06 Score=46.62 Aligned_cols=73 Identities=26% Similarity=0.473 Sum_probs=47.0
Q ss_pred CCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCCC-------CCeeeeCCceeEeecCCcEE
Q psy16421 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTV-------PPIVKIPSQLIGAHEGQQLV 120 (151)
Q Consensus 48 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~~-------~p~~~~~~~~~~~~~g~~~~ 120 (151)
+|.+...+ ..+.+.+|+.+.|.|.+.+.|.|.+.|++ ++..+........ .-.+.+. .+...+...
T Consensus 5 pP~i~~~~--~~~~~~~G~~~~l~C~~~g~p~p~v~W~~-~~~~~~~~~~~~~~~~~~~~~~~L~i~----~v~~~D~G~ 77 (100)
T 3irg_A 5 PPKIEALP--SDISIDEGKVLTVACAFTGEPTPEVTWSC-GGRKIHSQEQGRFHIENTDDLTTLIIM----DVQKQDGGL 77 (100)
T ss_dssp EEEECCCC--SEEEEETTSEEEEEEEEEEESCCEEEEEE-TTEECCTTGGGTEEEEECSSEEEEEES----SCCGGGCEE
T ss_pred CCeeecCC--CcEEEcCCCcEEEEEEEEEcCCCceEEEE-CCEEeecCCCCEEEEEecCCEEEEEEe----ecCcccCEE
Confidence 45554444 56788899999999999999999999999 5655542110000 0111111 234677888
Q ss_pred EEeeecc
Q psy16421 121 LECISEA 127 (151)
Q Consensus 121 l~C~~~g 127 (151)
..|.+..
T Consensus 78 Y~C~a~n 84 (100)
T 3irg_A 78 YTLSLGN 84 (100)
T ss_dssp EEEEEEE
T ss_pred EEEEEEe
Confidence 9998764
No 491
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.96 E-value=9.8e-06 Score=46.62 Aligned_cols=73 Identities=19% Similarity=0.191 Sum_probs=48.9
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEecccCCC-----CCCeeeeCCceeEeecCCcEEE
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNT-----VPPIVKIPSQLIGAHEGQQLVL 121 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~~~~~~~-----~~p~~~~~~~~~~~~~g~~~~l 121 (151)
.+|.|...+ .++.+.+|+++.|.|.+ .|.+.+.|++ +++.+....+.. ....+.+. .+...+....
T Consensus 6 ~p~~~~~~~--~~~~v~~G~~v~l~C~v--~p~p~v~W~k-~g~~l~~~~r~~i~~~~~~~~L~I~----~v~~~D~G~Y 76 (100)
T 2yuz_A 6 SGLKILTPL--TDQTVNLGKEICLKCEI--SENIPGKWTK-NGLPVQESDRLKVVQKGRIHKLVIA----NALTEDEGDY 76 (100)
T ss_dssp CCCCCSBCC--CCEEEETTSCCCEEEEC--SSCCCEEEEE-TTEECCCCSSEEEEECSSEEEEEES----SCCGGGCSEE
T ss_pred CCCEEeccC--CceEEcCCCCEEEEEEe--CCCCeEEEEE-CCEECCCCCcEEEEEeCCEEEEEEC----CCChhhCEEE
Confidence 466776666 67899999999999999 7889999999 666665322100 00011111 2345777888
Q ss_pred Eeeeccc
Q psy16421 122 ECISEAY 128 (151)
Q Consensus 122 ~C~~~g~ 128 (151)
.|.+...
T Consensus 77 ~C~a~N~ 83 (100)
T 2yuz_A 77 VFAPDAY 83 (100)
T ss_dssp EEEESSS
T ss_pred EEEEcCC
Confidence 8988765
No 492
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.96 E-value=5.1e-06 Score=47.57 Aligned_cols=36 Identities=19% Similarity=0.279 Sum_probs=29.8
Q ss_pred CceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 108 SQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 108 ~~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
+....+.+|+.+.|.|.+.|.| |.+.|+|++..+..
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~ 45 (99)
T 2cr3_A 10 VESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAE 45 (99)
T ss_dssp EEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCC
T ss_pred CcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCC
Confidence 4455688999999999999987 79999999866644
No 493
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.95 E-value=5.8e-06 Score=48.05 Aligned_cols=44 Identities=34% Similarity=0.760 Sum_probs=37.0
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEe
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMIT 93 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~ 93 (151)
.+|.+...+ ..+.+.+|+.+.|.|.+.+.|.+.+.|++ +++.+.
T Consensus 8 ~~P~i~~~~--~~~~v~~G~~v~l~C~~~g~p~p~v~W~~-~g~~~~ 51 (110)
T 2dm3_A 8 FRPHFLQAP--GDLTVQEGKLCRMDCKVSGLPTPDLSWQL-DGKPVR 51 (110)
T ss_dssp CCCEEEECC--CEEEEESSSCBCCEEEEECSSCCEEECBB-SSSBCC
T ss_pred CCCcEEeCC--CcEEEeCCCEEEEEEEEEEcCCCEEEEEE-CCEECC
Confidence 578887776 67889999999999999999999999999 555544
No 494
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=97.95 E-value=6.3e-06 Score=46.70 Aligned_cols=32 Identities=25% Similarity=0.353 Sum_probs=25.6
Q ss_pred CccccccCCeEEEEEEEcCCCCCCccceEEEEe
Q psy16421 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33 (151)
Q Consensus 1 i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~l~v~ 33 (151)
|.+++.+|+|.|+|.|.|..| .....+.|.|.
T Consensus 55 i~~~~~~D~G~Y~C~a~n~~g-~~~~~~~l~V~ 86 (95)
T 4hwu_A 55 IKGATPRDSGLYACTAARTVD-SETWIFMVNVT 86 (95)
T ss_dssp ECSCCGGGCEEEEEEEECSSC-EEEEEEEEEEC
T ss_pred ECcCCcccCEEEEEEEccCCC-cEEEEEEEEEe
Confidence 568899999999999999988 55556666653
No 495
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=97.95 E-value=1.6e-05 Score=46.20 Aligned_cols=38 Identities=18% Similarity=0.344 Sum_probs=31.3
Q ss_pred CCeeEeCCCCCceEeecCCeEEEEeeecCCCC---CeEEEEeC
Q psy16421 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSPP---PSIMWRRE 87 (151)
Q Consensus 48 ~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~---~~~~W~~~ 87 (151)
.|.|...+ ..+.+.+|+++.|.|.+.|.|. |.+.|++.
T Consensus 4 ~p~f~~~p--~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~ 44 (108)
T 3cx2_A 4 IGLFVMRP--QDGEVTVGGSITFSARVAGASLLKPPVVKWFKG 44 (108)
T ss_dssp CCSCSBCC--CCEEEETTCCEEEEEEEECC-CCSCCEEEEEET
T ss_pred ccEEEeCC--CcEEEeCCCCEEEEEEECCCccCCCcEEEEccC
Confidence 45666665 6788999999999999999888 99999994
No 496
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=97.94 E-value=1.9e-05 Score=47.80 Aligned_cols=42 Identities=31% Similarity=0.541 Sum_probs=35.7
Q ss_pred CCCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCee
Q psy16421 46 SMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGE 90 (151)
Q Consensus 46 ~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~ 90 (151)
..+|.+...+ ..+.+.+|+++.|.|.+.|.|.|.+.|++ ++.
T Consensus 19 ~~pP~~~~~p--~~~~v~~G~~v~L~C~~~g~P~p~i~W~k-~~~ 60 (137)
T 3qr2_A 19 SHMAGFVQAP--LSQQRWVGGSVELHCEAVGSPVPEIQWWF-EGQ 60 (137)
T ss_dssp --CCEEEECC--CCEEEETTSCEEEEEEEECSSCCEEEEEE-EES
T ss_pred CCCCeEEcCC--CCEEEeCCCCEEEEEEEeeecCCeEEEEE-CCC
Confidence 4688998877 67889999999999999999999999999 444
No 497
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=97.94 E-value=7.8e-05 Score=49.41 Aligned_cols=28 Identities=21% Similarity=0.541 Sum_probs=21.3
Q ss_pred eecCCcEEEEeeecc-cCCCe-eEEEcCCc
Q psy16421 113 AHEGQQLVLECISEA-YPKSV-NYWTREKG 140 (151)
Q Consensus 113 ~~~g~~~~l~C~~~g-~p~~~-~~W~k~~~ 140 (151)
+..|+.+.|.|.+.+ .|.+. ++|+++|.
T Consensus 152 ~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~ 181 (239)
T 3tv3_H 152 STSGGTAALGCLVKDYFPEPVTVSWNSGAL 181 (239)
T ss_dssp C--TTEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred hccCCcEEEEEEEeeEeCCCeEEEEEECCc
Confidence 456899999999998 55554 89999875
No 498
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.92 E-value=8.7e-06 Score=46.69 Aligned_cols=35 Identities=14% Similarity=0.332 Sum_probs=29.9
Q ss_pred ceeEeecCCcEEEEeeecccCCCeeEEEcCCceecc
Q psy16421 109 QLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIA 144 (151)
Q Consensus 109 ~~~~~~~g~~~~l~C~~~g~p~~~~~W~k~~~~~~~ 144 (151)
....+.+|+++.|.|.+. .|.+.+.|+|+|..+..
T Consensus 19 ~~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~ 53 (102)
T 2eo1_A 19 REVQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSS 53 (102)
T ss_dssp EEEEEETTCCEEECCBCS-CSSSCCEEEETTEECCC
T ss_pred ccEEEeCCCcEEEEEEec-CCCCceEEEECCEECCC
Confidence 455789999999999998 88899999999876644
No 499
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=97.92 E-value=3.6e-05 Score=43.58 Aligned_cols=65 Identities=14% Similarity=0.180 Sum_probs=43.2
Q ss_pred CceEeecCCeEEEEeeecCC-CCCeEEEEeCCeeeEecccCCCCCCeeeeCCc-----eeEeecCCcEEEEeeecc
Q psy16421 58 SDIMVREGSNVSMRCAASGS-PPPSIMWRREGGEMITNSFNNTVPPIVKIPSQ-----LIGAHEGQQLVLECISEA 127 (151)
Q Consensus 58 ~~~~~~~g~~~~l~C~~~g~-~~~~~~W~~~~~~~~~~~~~~~~~p~~~~~~~-----~~~~~~g~~~~l~C~~~g 127 (151)
..+.+.+|+.+.|.|.+.|. |.+.+.|++ +++.+..... -.+..... ...+...+.....|.+..
T Consensus 9 ~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~-~~~~~~~~~~----~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 79 (97)
T 2bk8_A 9 MHAVGEEGGHVKYVCKIENYDQSTQVTWYF-GVRQLENSEK----YEITYEDGVAILYVKDITKLDDGTYRCKVVN 79 (97)
T ss_dssp CCEEECTTCCEEEEEEEESCCTTCEEEEEE-TTEECCSSSS----EEEEEETTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred cCEEEcCCCcEEEEEEEeccCCCCEEEEEE-CCEECcCCCC----EEEEEcCCeEEEEEecCChhhCeEEEEEEEC
Confidence 56788899999999999997 899999999 5555442211 11111111 112446778889998864
No 500
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=97.90 E-value=1.7e-05 Score=45.52 Aligned_cols=43 Identities=26% Similarity=0.543 Sum_probs=34.4
Q ss_pred CCCeeEeCCCCCceEeecCCeEEEEeeecCCCCCeEEEEeCCeeeEe
Q psy16421 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMIT 93 (151)
Q Consensus 47 ~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~~~~~~~W~~~~~~~~~ 93 (151)
.+|.+...+ ..+.+.+|+++.|.|.+.+.+.+ +.|++ +++.+.
T Consensus 7 ~pp~~~~~~--~~~~v~~G~~v~l~C~~~~~p~~-v~W~k-~~~~l~ 49 (103)
T 2e7b_A 7 GPVRFQEAL--KDLEVLEGGAATLRCVLSSVAAP-VKWCY-GNNVLR 49 (103)
T ss_dssp CCCCCTBCC--CCEEEESSSCEEEEEECSSCCCS-CEEEE-SSSBCC
T ss_pred CCCEEEecC--ccEEEECCCcEEEEEEEeCCCCC-eEEEE-CCEECC
Confidence 466666555 57889999999999999998888 99999 555543
Done!