RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy16421
(151 letters)
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 47.6 bits (112), Expect = 2e-08
Identities = 11/52 (21%), Positives = 25/52 (48%)
Query: 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNN 98
+PP + + + G +V++ C A G P P++ W ++G + ++
Sbjct: 2 VPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDD 53
Score = 29.8 bits (66), Expect = 0.045
Identities = 11/38 (28%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Query: 100 VPPIVKIPSQLIG--AHEGQQLVLECISEAYPKSVNYW 135
VPP V+ ++ A+ GQ + L C ++ +P+ W
Sbjct: 2 VPPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSW 39
Score = 26.8 bits (58), Expect = 0.57
Identities = 9/34 (26%), Positives = 12/34 (35%), Gaps = 1/34 (2%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQC 34
+ V + Y+CIA N I L V
Sbjct: 67 IRNVDKNDEAEYVCIAENKA-GEQDASIHLKVFA 99
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 42.7 bits (99), Expect = 1e-06
Identities = 14/91 (15%), Positives = 31/91 (34%), Gaps = 1/91 (1%)
Query: 45 SSMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVPPIV 104
S P IL ++ G +V C P I W + + + + +P +
Sbjct: 1 SRHRP-ILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLK 59
Query: 105 KIPSQLIGAHEGQQLVLECISEAYPKSVNYW 135
+ + + + + VL + + + Y
Sbjct: 60 VLKAAGVNTTDKEIEVLYIRNVTFEDAGEYT 90
Score = 26.9 bits (58), Expect = 0.57
Identities = 4/41 (9%), Positives = 9/41 (21%)
Query: 101 PPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGD 141
P + G + C + + W +
Sbjct: 5 PILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEK 45
Score = 24.9 bits (53), Expect = 2.6
Identities = 9/32 (28%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIV 32
+ V+ E G Y C+A N + L V
Sbjct: 78 IRNVTFEDAGEYTCLAGNSI-GISFHSAWLTV 108
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 41.0 bits (95), Expect = 4e-06
Identities = 11/48 (22%), Positives = 22/48 (45%), Gaps = 2/48 (4%)
Query: 49 PDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSF 96
P I+ +P D VR G +V + +G+ P + W + ++ +
Sbjct: 1 PQIIQFP--EDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEH 46
Score = 29.4 bits (65), Expect = 0.068
Identities = 6/51 (11%), Positives = 15/51 (29%), Gaps = 1/51 (1%)
Query: 101 PPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIANGKTPFQ 151
P I++ P G+ + L W + + + + +
Sbjct: 1 PQIIQFPEDQK-VRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVE 50
Score = 26.3 bits (57), Expect = 0.74
Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33
+ +EH G Y + N + S ++ L V
Sbjct: 60 ILAARQEHCGCYTLLVENKL-GSRQAQVNLTVV 91
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 40.6 bits (94), Expect = 5e-06
Identities = 11/34 (32%), Positives = 16/34 (47%)
Query: 62 VREGSNVSMRCAASGSPPPSIMWRREGGEMITNS 95
V + V RC A G+P P++ W + G E
Sbjct: 17 VPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEH 50
Score = 30.9 bits (69), Expect = 0.018
Identities = 5/43 (11%), Positives = 12/43 (27%)
Query: 105 KIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIANGK 147
K+ +L + C + P W + + +
Sbjct: 9 KMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHR 51
Score = 26.3 bits (57), Expect = 0.83
Identities = 9/32 (28%), Positives = 12/32 (37%), Gaps = 1/32 (3%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIV 32
M V G Y C+ N S++ L V
Sbjct: 66 MESVVPSDKGNYTCVVENEY-GSINHTYHLDV 96
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 40.5 bits (94), Expect = 5e-06
Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSF 96
P P I+V++G +V++ C +G P P+++W +
Sbjct: 2 APKYEQKP-EKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRA 49
Score = 35.5 bits (81), Expect = 3e-04
Identities = 8/44 (18%), Positives = 17/44 (38%)
Query: 99 TVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDM 142
+ P + P ++I +GQ + + C P W+ +
Sbjct: 1 SAPKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPL 44
Score = 27.4 bits (60), Expect = 0.33
Identities = 7/32 (21%), Positives = 11/32 (34%), Gaps = 1/32 (3%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIV 32
+ V G Y C A+N ++ V
Sbjct: 58 IKGVKNGDKGYYGCRATNEH-GDKYFETLVQV 88
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 40.4 bits (93), Expect = 6e-06
Identities = 9/44 (20%), Positives = 17/44 (38%)
Query: 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEM 91
P + + + E S + C A G+P P + ++G
Sbjct: 2 GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFP 45
Score = 26.5 bits (57), Expect = 0.63
Identities = 4/30 (13%), Positives = 7/30 (23%)
Query: 113 AHEGQQLVLECISEAYPKSVNYWTREKGDM 142
E Q C + P ++
Sbjct: 16 WPENSQQTPMCQAWGNPLPELKCLKDGTFP 45
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 39.9 bits (92), Expect = 1e-05
Identities = 10/72 (13%), Positives = 22/72 (30%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVPPIVKIPSQLIGAHE 115
S D+M + G + C +P + + G ++ N + +L+
Sbjct: 9 VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTT 68
Query: 116 GQQLVLECISEA 127
+ E
Sbjct: 69 LPEDEGVYTCEV 80
Score = 26.4 bits (57), Expect = 0.65
Identities = 6/37 (16%), Positives = 16/37 (43%)
Query: 101 PPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTR 137
P+ + S+ + A G ++ C+ + P + +
Sbjct: 3 EPVPQYVSKDMMAKAGDVTMIYCMYGSNPMGYPNYFK 39
Score = 25.6 bits (55), Expect = 1.5
Identities = 9/32 (28%), Positives = 10/32 (31%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIV 32
E G Y C NGV + L V
Sbjct: 65 FKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTV 96
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 39.7 bits (91), Expect = 2e-05
Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Query: 48 PPDI-LDYP--TSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNS 95
PP I LD P I+V G+ + + SG P P+++W++ +
Sbjct: 4 PPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAP 54
Score = 26.6 bits (57), Expect = 0.80
Identities = 6/31 (19%), Positives = 9/31 (29%), Gaps = 1/31 (3%)
Query: 2 TEVSREHMGAYLCIASNGVPPSVSKRIMLIV 32
+E G Y N V + + V
Sbjct: 99 EGAEKEDEGVYTVTVKNPV-GEDQVNLTVKV 128
Score = 25.0 bits (53), Expect = 3.0
Identities = 9/56 (16%), Positives = 14/56 (25%), Gaps = 5/56 (8%)
Query: 101 PPIVKIP-----SQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIANGKTPFQ 151
PP + + I G +L L+ P W + P
Sbjct: 4 PPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAP 59
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 38.7 bits (89), Expect = 2e-05
Identities = 10/43 (23%), Positives = 21/43 (48%)
Query: 58 SDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTV 100
+ +EG + + C S PP+I+W+ +G ++I +
Sbjct: 9 TPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFI 51
Score = 26.4 bits (57), Expect = 0.75
Identities = 6/33 (18%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKR-IMLIV 32
+ + + G Y C ++ + I +IV
Sbjct: 60 IRGIKKTDEGTYRCEGRILARGEINFKDIQVIV 92
Score = 25.6 bits (55), Expect = 1.2
Identities = 6/28 (21%), Positives = 11/28 (39%)
Query: 115 EGQQLVLECISEAYPKSVNYWTREKGDM 142
EG+ V+ C + W + D+
Sbjct: 15 EGEDAVIVCDVVSSLPPTIIWKHKGRDV 42
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 38.3 bits (88), Expect = 4e-05
Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Query: 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWR 85
P I +D G V++ C A G+P P I WR
Sbjct: 4 APSI-KAKFPADTYALTGQMVTLECFAFGNPVPQIKWR 40
Score = 30.6 bits (68), Expect = 0.022
Identities = 8/33 (24%), Positives = 13/33 (39%), Gaps = 1/33 (3%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33
+ V E G Y C A N + + +I+
Sbjct: 59 IQNVDFEDEGTYECEAENIK-GRDTYQGRIIIH 90
Score = 29.4 bits (65), Expect = 0.067
Identities = 11/43 (25%), Positives = 14/43 (32%)
Query: 101 PPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMI 143
P I A GQ + LEC + P W + G
Sbjct: 5 PSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQT 47
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 37.5 bits (86), Expect = 5e-05
Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Query: 49 PDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVPPIVKIP 107
PD LD +D GS++ C ASG P P++ W R+G + + + ++
Sbjct: 2 PDWLDVI--TDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGGELRFS 58
Score = 27.5 bits (60), Expect = 0.25
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33
+++ E G Y C+A N +V L VQ
Sbjct: 57 FSKLVLEDSGMYQCVAENKH-GTVYASAELTVQ 88
Score = 25.6 bits (55), Expect = 1.4
Identities = 7/35 (20%), Positives = 13/35 (37%), Gaps = 1/35 (2%)
Query: 101 PPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYW 135
P + + + A G L C++ P+ W
Sbjct: 2 PDWLDVITDTE-ADIGSDLRWSCVASGKPRPAVRW 35
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 98
Score = 37.9 bits (87), Expect = 6e-05
Identities = 10/37 (27%), Positives = 13/37 (35%), Gaps = 2/37 (5%)
Query: 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMW 84
P I + V +GS+ R G P P W
Sbjct: 4 APKIFERI--QSQTVGQGSDAHFRVRVVGKPDPECEW 38
Score = 27.9 bits (61), Expect = 0.25
Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 1/33 (3%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33
+ +V+ E + + A N S L+VQ
Sbjct: 65 IRDVTGEDSASIMVKAINIA-GETSSHAFLLVQ 96
Score = 26.4 bits (57), Expect = 0.74
Identities = 5/35 (14%), Positives = 7/35 (20%)
Query: 101 PPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYW 135
P + Q +G P W
Sbjct: 4 APKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEW 38
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different
modules [TaxId: 9606]}
Length = 91
Score = 37.1 bits (85), Expect = 9e-05
Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Query: 51 ILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNN 98
IL P + V EG + C G P P++ W R+G + T++ +
Sbjct: 2 ILTKP--RSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQ 47
Score = 30.6 bits (68), Expect = 0.023
Identities = 6/33 (18%), Positives = 10/33 (30%), Gaps = 1/33 (3%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33
++ V G Y + N L +Q
Sbjct: 59 ISSVQASDEGNYSVVVENSE-GKQEAEFTLTIQ 90
Score = 25.6 bits (55), Expect = 1.5
Identities = 7/34 (20%), Positives = 13/34 (38%), Gaps = 1/34 (2%)
Query: 103 IVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWT 136
I+ P + +EG+ C ++ P W
Sbjct: 2 ILTKPRSMT-VYEGESARFSCDTDGEPVPTVTWL 34
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 36.5 bits (83), Expect = 2e-04
Identities = 9/41 (21%), Positives = 16/41 (39%)
Query: 58 SDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNN 98
+ V +G V + C+ G P I W ++G +
Sbjct: 4 VKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLY 44
Score = 35.7 bits (81), Expect = 3e-04
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33
+ V R G Y C +G +S+ + L V+
Sbjct: 58 LKSVERSDAGRYWCQVEDGGETEISQPVWLTVE 90
Score = 23.4 bits (49), Expect = 8.0
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 113 AHEGQQLVLECISEAYPKSVNYWTR 137
+GQ + L C E + W +
Sbjct: 8 VSQGQPVKLNCSVEGMEEPDIQWVK 32
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 97
Score = 36.0 bits (82), Expect = 2e-04
Identities = 14/53 (26%), Positives = 23/53 (43%), Gaps = 5/53 (9%)
Query: 46 SMPPDILDYPTSSDIMVREGS---NVSMRCAASGSPPPSIMWRREGGEMITNS 95
S P + P + + EGS V++ C A +PP + W+ G E+
Sbjct: 2 SYGPVFEEQP--AHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGP 52
Score = 26.4 bits (57), Expect = 0.71
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIML 30
V + G+Y C+A+N VS+ L
Sbjct: 66 SNPVKAKDAGSYQCVATNARGTVVSREASL 95
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 35.7 bits (81), Expect = 3e-04
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 47 MPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMW 84
+ P IL I ++ G ++ G+P P+ W
Sbjct: 1 LKPKILTAS--RKIKIKAGFTHNLEVDFIGAPDPTATW 36
Score = 28.0 bits (61), Expect = 0.21
Identities = 8/36 (22%), Positives = 11/36 (30%)
Query: 100 VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYW 135
+ P + S+ I G LE P W
Sbjct: 1 LKPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATW 36
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo)
[TaxId: 9103]}
Length = 102
Score = 35.3 bits (80), Expect = 5e-04
Identities = 12/46 (26%), Positives = 18/46 (39%), Gaps = 2/46 (4%)
Query: 46 SMPPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEM 91
+ P D+ V EGS C G P P +MW ++ +
Sbjct: 6 HVKPYFTKTI--LDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPV 49
Score = 30.2 bits (67), Expect = 0.034
Identities = 8/33 (24%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33
++EV + Y C A N + + L+V+
Sbjct: 69 ISEVCGDDDAKYTCKAVNSL-GEATCTAELLVE 100
Score = 24.9 bits (53), Expect = 3.1
Identities = 9/36 (25%), Positives = 11/36 (30%)
Query: 100 VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYW 135
V P + EG +C E YP W
Sbjct: 7 VKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMW 42
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 35.3 bits (80), Expect = 5e-04
Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Query: 49 PDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMW 84
P + P V EG + + C S PP + W
Sbjct: 2 PRFIVKP--YGTEVGEGQSANFYCRVIASSPPVVTW 35
Score = 27.5 bits (60), Expect = 0.26
Identities = 7/33 (21%), Positives = 12/33 (36%), Gaps = 1/33 (3%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33
+ V + G Y A N + + + L V
Sbjct: 61 INRVKGDDKGEYTVRAKNSY-GTKEEIVFLNVT 92
Score = 25.2 bits (54), Expect = 2.1
Identities = 9/35 (25%), Positives = 10/35 (28%), Gaps = 1/35 (2%)
Query: 101 PPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYW 135
P + P EGQ C A V W
Sbjct: 2 PRFIVKPYGTE-VGEGQSANFYCRVIASSPPVVTW 35
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 35.0 bits (79), Expect = 7e-04
Identities = 14/49 (28%), Positives = 18/49 (36%), Gaps = 3/49 (6%)
Query: 48 PPDILDYPTSSDIMVREGSNVSMRC-AASGSPPPSIMWRREGGEMITNS 95
PP S G+ + C GSPP W ++G M TN
Sbjct: 2 PPSKPTVNIPSS--ATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNP 48
Score = 26.1 bits (56), Expect = 0.88
Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Query: 100 VPPIVKIPSQLIGAHEGQQLVLEC-ISEAYPKSVNYWTREKGDMIANGK 147
VPP + A G + VL C + P S W ++ M N K
Sbjct: 1 VPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPK 49
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 34.3 bits (77), Expect = 0.001
Identities = 10/62 (16%), Positives = 19/62 (30%), Gaps = 2/62 (3%)
Query: 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVPPIVKIP 107
PP + S + EG + C + PP + + + + N +
Sbjct: 2 PPRVKAVK--SSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVS 59
Query: 108 SQ 109
S
Sbjct: 60 SS 61
Score = 30.4 bits (67), Expect = 0.026
Identities = 11/36 (30%), Positives = 17/36 (47%)
Query: 101 PPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWT 136
PP VK +EG+ +L C SE+ P ++
Sbjct: 2 PPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAW 37
>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 34.4 bits (77), Expect = 0.001
Identities = 10/46 (21%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Query: 49 PDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITN 94
P I+ P + + V GS + + C +G W+ G + +
Sbjct: 2 PVIV-SPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDED 46
Score = 30.9 bits (68), Expect = 0.021
Identities = 9/51 (17%), Positives = 17/51 (33%)
Query: 101 PPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIANGKTPFQ 151
P IV ++ + G Q+ L C + YW + + +
Sbjct: 2 PVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGE 52
>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 88
Score = 33.7 bits (76), Expect = 0.002
Identities = 9/33 (27%), Positives = 15/33 (45%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33
+ + + H G Y C + G SK + + VQ
Sbjct: 53 IPQANHSHSGDYHCTGNIGYTLYSSKPVTITVQ 85
Score = 29.9 bits (66), Expect = 0.040
Identities = 8/50 (16%), Positives = 20/50 (40%)
Query: 57 SSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVPPIVKI 106
+ + +EG + +RC + P + + G+ S ++ I +
Sbjct: 7 TPHLEFQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPNFSIPQA 56
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 33.5 bits (75), Expect = 0.002
Identities = 10/77 (12%), Positives = 26/77 (33%), Gaps = 2/77 (2%)
Query: 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVPPIVKIP 107
P + D P ++++ RE + + C G+ ++ G+ +N +
Sbjct: 2 YPVLKDQP--AEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGS 59
Query: 108 SQLIGAHEGQQLVLECI 124
+ + +C
Sbjct: 60 LVFLRPQASDEGHYQCF 76
Score = 28.1 bits (61), Expect = 0.20
Identities = 12/43 (27%), Positives = 18/43 (41%)
Query: 101 PPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMI 143
P++K + E VLECI E + V Y ++ G
Sbjct: 2 YPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSY 44
Score = 25.0 bits (53), Expect = 2.0
Identities = 6/30 (20%), Positives = 8/30 (26%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIML 30
G Y C A + S+ I
Sbjct: 62 FLRPQASDEGHYQCFAETPAGVASSRVISF 91
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 33.1 bits (74), Expect = 0.004
Identities = 14/50 (28%), Positives = 20/50 (40%), Gaps = 3/50 (6%)
Query: 48 PPDILDYPTSSDIMVREGSNVSMRCAAS-GSPPPSIMWRREGGEMITNSF 96
PP S V G+ + C+ GSPP W ++G M+T
Sbjct: 2 PPSKPTISVPSS--VTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADA 49
Score = 26.1 bits (56), Expect = 1.1
Identities = 8/33 (24%), Positives = 11/33 (33%), Gaps = 1/33 (3%)
Query: 2 TEVSREHMGAYLCIASNGV-PPSVSKRIMLIVQ 33
V+ G Y C A NG S+ +
Sbjct: 72 DPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAV 104
Score = 25.3 bits (54), Expect = 1.9
Identities = 10/47 (21%), Positives = 13/47 (27%)
Query: 100 VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMIANG 146
VPP S G + VL C Y + G +
Sbjct: 1 VPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTA 47
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 32.3 bits (72), Expect = 0.005
Identities = 11/60 (18%), Positives = 19/60 (31%)
Query: 49 PDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVPPIVKIPS 108
P ++ VR G++V+ C A P + S I+ I +
Sbjct: 1 PIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDFNGILTIRN 60
Score = 25.3 bits (54), Expect = 1.5
Identities = 9/33 (27%), Positives = 11/33 (33%), Gaps = 1/33 (3%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33
+ V G Y+C SN L VQ
Sbjct: 58 IRNVQPSDAGTYVCTGSNMF-AMDQGTATLHVQ 89
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 32.7 bits (73), Expect = 0.006
Identities = 6/42 (14%), Positives = 12/42 (28%), Gaps = 1/42 (2%)
Query: 58 SDIMVREGSNVSMRCAASGSP-PPSIMWRREGGEMITNSFNN 98
S+ + G + C P + W + G +
Sbjct: 11 SEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDR 52
Score = 24.2 bits (51), Expect = 4.9
Identities = 8/33 (24%), Positives = 10/33 (30%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33
V G+Y C A+ S L V
Sbjct: 69 FEPVLPNDNGSYRCSANFQSNLIESHSTTLYVT 101
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 32.3 bits (72), Expect = 0.006
Identities = 5/29 (17%), Positives = 10/29 (34%)
Query: 58 SDIMVREGSNVSMRCAASGSPPPSIMWRR 86
++ V G + +C+A G
Sbjct: 9 QNVEVNAGQFATFQCSAIGRTVAGDRLWL 37
Score = 31.1 bits (69), Expect = 0.015
Identities = 6/33 (18%), Positives = 13/33 (39%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33
+ ++ G Y C+ +S L+V+
Sbjct: 64 VVNTTKRDAGKYRCMIRTEGGVGISNYAELVVK 96
>d1i9ea_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 115
Score = 32.1 bits (72), Expect = 0.010
Identities = 9/31 (29%), Positives = 16/31 (51%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPSIMWRR 86
+ + V EG+++ +RC S S P + W
Sbjct: 6 PDARVTVSEGASLQLRCKYSYSATPYLFWYV 36
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 30.9 bits (69), Expect = 0.015
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Query: 58 SDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNS 95
D G V + C S ++ W + G E+I
Sbjct: 8 EDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGP 44
>d2ij0c1 b.1.1.1 (C:1-117) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 118
Score = 30.7 bits (68), Expect = 0.027
Identities = 7/31 (22%), Positives = 17/31 (54%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPSIMWRR 86
S ++V+ G++V + C + + ++ W R
Sbjct: 7 HPSMVIVKSGTSVKIECRSLDTNIHTMFWYR 37
>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 30.3 bits (67), Expect = 0.029
Identities = 3/40 (7%), Positives = 11/40 (27%), Gaps = 1/40 (2%)
Query: 53 DYPTSSDIMVREGSNVSMRCAAS-GSPPPSIMWRREGGEM 91
+ ++ C + +I W ++ +
Sbjct: 5 EREEKIILVSSANEIDVRPCPLNPNEHKGTITWYKDDSKT 44
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 30.2 bits (67), Expect = 0.033
Identities = 5/30 (16%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 62 VREGSNVSMRCAASGSPPPSIMWRREGGEM 91
V +G + + + + W + G E+
Sbjct: 18 VSKGHKIRLTVELAD-HDAEVKWLKNGQEI 46
Score = 24.8 bits (53), Expect = 2.4
Identities = 4/35 (11%), Positives = 9/35 (25%)
Query: 101 PPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYW 135
K +G ++ L + V +
Sbjct: 6 TAFQKKLEPAYQVSKGHKIRLTVELADHDAEVKWL 40
>d1j8hd1 b.1.1.1 (D:1-117) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 115
Score = 30.2 bits (67), Expect = 0.036
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPSIMWRR 86
S + V EG+ V +RC S S PP + W
Sbjct: 6 LGSHVSVSEGALVLLRCNYSSSVPPYLFWYV 36
>d1o0va1 b.1.1.2 (A:228-330) Immunoglobulin heavy chain epsilon
constant domain 2, CH2-epsilon {Human (Homo sapiens)
[TaxId: 9606]}
Length = 104
Score = 30.1 bits (67), Expect = 0.045
Identities = 12/57 (21%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Query: 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIM--WRREGGEMITNSFNNTVPP 102
PP + +S D + + C SG P +I W +G M + +
Sbjct: 4 PPTVKILQSSCDGGGHFPPTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQ 60
>d1fo0b_ b.1.1.1 (B:) T-cell antigen receptor {Mouse (Mus
musculus), beta-chain [TaxId: 10090]}
Length = 112
Score = 30.1 bits (67), Expect = 0.048
Identities = 8/31 (25%), Positives = 13/31 (41%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPSIMWRR 86
+V G V++RC S P + W +
Sbjct: 7 NPRWRLVPRGQAVNLRCILKNSQYPWMSWYQ 37
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 29.7 bits (65), Expect = 0.061
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 54 YPTSSDIMVREGSNVSMRCAASGSPPPSIMW 84
+ + ++ + E + V + CA SG P + W
Sbjct: 8 HSSEPEVRIPENNPVKLSCAYSGFSSPRVEW 38
>d1ac6a_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 110
Score = 29.0 bits (64), Expect = 0.11
Identities = 7/31 (22%), Positives = 14/31 (45%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPSIMWRR 86
T + + E +++ C S S P++ W
Sbjct: 6 TEGQVALSEEDFLTIHCNYSASGYPALFWYV 36
>d1dr9a2 b.1.1.3 (A:106-200) CD80, second domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 95
Score = 28.7 bits (63), Expect = 0.12
Identities = 12/49 (24%), Positives = 21/49 (42%), Gaps = 1/49 (2%)
Query: 55 PTSSDIMVREGSNVSMRCAASG-SPPPSIMWRREGGEMITNSFNNTVPP 102
P+ SD + + + C+ SG P P + W G E+ + + P
Sbjct: 6 PSISDFEIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAINTTVSQDP 54
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 28.2 bits (62), Expect = 0.15
Identities = 5/27 (18%), Positives = 6/27 (22%), Gaps = 1/27 (3%)
Query: 58 SDIMVREGSNVSMRCAASGSPPPSIMW 84
+ V G S P W
Sbjct: 9 YGVEVFVGETAHFEIELSE-PDVHGQW 34
>d2nxyb2 b.1.1.3 (B:1098-1181) CD4 C2-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 84
Score = 28.1 bits (61), Expect = 0.17
Identities = 6/29 (20%), Positives = 15/29 (51%)
Query: 57 SSDIMVREGSNVSMRCAASGSPPPSIMWR 85
+SD + +G ++++ + PS+ R
Sbjct: 6 NSDTHLLQGQSLTLTLESPPGSSPSVQCR 34
>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor
receptor TrkA, different domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 28.2 bits (61), Expect = 0.20
Identities = 8/34 (23%), Positives = 11/34 (32%)
Query: 58 SDIMVREGSNVSMRCAASGSPPPSIMWRREGGEM 91
+ V G +V +RC G W E
Sbjct: 10 PNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQ 43
>d1tvda_ b.1.1.1 (A:) T-cell antigen receptor {Human (Homo
sapiens), delta-chain [TaxId: 9606]}
Length = 116
Score = 28.3 bits (62), Expect = 0.21
Identities = 10/32 (31%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPP-PSIMWRR 86
+S D V GS V + C P + W R
Sbjct: 6 SSPDQTVASGSEVVLLCTYDTVYSNPDLFWYR 37
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor
tyro3, second domain {Human (Homo sapiens) [TaxId:
9606]}
Length = 85
Score = 27.6 bits (60), Expect = 0.21
Identities = 5/33 (15%), Positives = 11/33 (33%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33
+ + C A N + S+ + +Q
Sbjct: 53 LNVTGVTQSTMFSCEAHNLKGLASSRTATVHLQ 85
>d1f2qa2 b.1.1.4 (A:86-174) IgE high affinity receptor alpha
subunit {Human (Homo sapiens) [TaxId: 9606]}
Length = 89
Score = 27.7 bits (60), Expect = 0.26
Identities = 7/33 (21%), Positives = 12/33 (36%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33
+T + E G Y C S+ + + V
Sbjct: 53 ITNATVEDSGTYYCTGKVWQLDYESEPLNITVI 85
Score = 26.9 bits (58), Expect = 0.44
Identities = 9/42 (21%), Positives = 18/42 (42%)
Query: 57 SSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNN 98
+S +V EG + +RC + + + GE + + N
Sbjct: 7 ASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWYEN 48
>d1fnla2 b.1.1.4 (A:87-175) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 89
Score = 27.6 bits (60), Expect = 0.27
Identities = 5/33 (15%), Positives = 14/33 (42%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33
+ + + + G+Y C G S+ + + +
Sbjct: 55 IPKATLKDSGSYFCRGLVGSKNVSSETVNITIT 87
Score = 27.2 bits (59), Expect = 0.38
Identities = 3/32 (9%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 57 SSDIMVREGSNVSMRCAASG-SPPPSIMWRRE 87
+ + +E + +RC + + + + +
Sbjct: 9 APRWVFKEEDPIHLRCHSWKNTALHKVTYLQN 40
>d2atpb1 b.1.1.1 (B:1-115) CD8 {Mouse (Mus musculus), beta-chain
[TaxId: 10090]}
Length = 115
Score = 27.5 bits (60), Expect = 0.38
Identities = 5/30 (16%), Positives = 11/30 (36%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPSIMWR 85
T S ++V+ M C + ++
Sbjct: 4 TPSSLLVQTNHTAKMSCEVKSISKLTSIYW 33
>d1l6za2 b.1.1.4 (A:108-203) Biliary glycoprotein C (CD66a,
CEACAM1A[1,4]), C-terminal domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 96
Score = 26.9 bits (58), Expect = 0.43
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQ 33
+ + RE G Y C SN V S I L +
Sbjct: 60 IDPIKREDAGEYQCEISNPVSVRRSNSIKLDII 92
Score = 25.4 bits (54), Expect = 1.9
Identities = 4/29 (13%), Positives = 12/29 (41%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPSIMW 84
++ V+E +V++ C ++
Sbjct: 9 QVTNTTVKELDSVTLTCLSNDIGANIQWL 37
>d2mhaa1 b.1.1.2 (A:182-270) Class I MHC, alpha-3 domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 89
Score = 26.8 bits (59), Expect = 0.43
Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 63 REGSNVSMRCAASGSPPPSI--MWRREGGEMITNSFNNTVPP 102
R V++RC A G P I W+ G E+I + P
Sbjct: 13 RPEDKVTLRCWALGFYPADITLTWQLNGEELIQDMELVETRP 54
>d1f97a1 b.1.1.1 (A:27-128) Junction adhesion molecule, JAM,
N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 102
Score = 27.0 bits (58), Expect = 0.50
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 54 YPTSSDIMVREGSNVSMRCAASGSPPPSIMWR 85
Y SD+ V E ++ + C SG P + W+
Sbjct: 5 YTAQSDVQVPENESIKLTCTYSGFSSPRVEWK 36
Score = 23.9 bits (50), Expect = 5.7
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 2 TEVSREHMGAYLCIASNGVPPSVSK-RIMLIV 32
+ V+R+ G Y C+ S + + I L V
Sbjct: 70 SSVTRKDNGEYTCMVSEEGGQNYGEVSIHLTV 101
>d1k5nb_ b.1.1.2 (B:) beta2-microglobulin {Human (Homo sapiens)
[TaxId: 9606]}
Length = 100
Score = 26.9 bits (59), Expect = 0.55
Identities = 10/56 (17%), Positives = 16/56 (28%), Gaps = 5/56 (8%)
Query: 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIM--WRREGGEMITNSFNNTVP 101
P I Y G + + C SG P I + G + ++
Sbjct: 5 TPKIQVYSRHP---AENGKSNFLNCYVSGFHPSDIEVDLLKNGERIEKVEHSDLSF 57
>d2ak4d1 b.1.1.1 (D:1-116) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 114
Score = 26.7 bits (58), Expect = 0.70
Identities = 5/29 (17%), Positives = 12/29 (41%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPSIMW 84
++I V E +V++ C ++
Sbjct: 6 AQTEISVVEKEDVTLDCVYETRDTTYYLF 34
>d1lp9e1 b.1.1.1 (E:0-117) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 115
Score = 26.8 bits (58), Expect = 0.75
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPSIMW 84
T + + EG V + C + P + W
Sbjct: 7 TEGLVTLTEGLPVMLNCTYQSTYSPFLFW 35
>d2cdea1 b.1.1.1 (A:2-115) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 114
Score = 26.7 bits (58), Expect = 0.78
Identities = 7/29 (24%), Positives = 17/29 (58%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPSIMW 84
+ +++ EG N +++C + SP ++ W
Sbjct: 6 SPQSLIILEGKNCTLQCNYTVSPFSNLRW 34
>d1smoa_ b.1.1.1 (A:) TREM-1 (triggering receptor expressed on
myeloid cells 1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 26.3 bits (57), Expect = 0.83
Identities = 6/33 (18%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPS--IMWRR 86
T ++EG + ++C + S W+
Sbjct: 5 TEEKYELKEGQTLDVKCDYTLEKFASSQKAWQI 37
>d2bnqd1 b.1.1.1 (D:2-114) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 113
Score = 26.5 bits (57), Expect = 0.90
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPSIMWRR 86
+ + V EG N+ + C+ + S ++ W R
Sbjct: 6 IPAALSVPEGENLVLNCSFTDSAIYNLQWFR 36
>d2grrb1 a.118.12.1 (B:431-587) Ran-GTPase activating protein 1
(RanGAP1), C-terminal domain {Human (Homo sapiens)
[TaxId: 9606]}
Length = 157
Score = 26.7 bits (59), Expect = 1.0
Identities = 7/51 (13%), Positives = 16/51 (31%)
Query: 93 TNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMI 143
T+ V +K+ S + V + + K+ N + +
Sbjct: 33 TSDPEKVVSAFLKVSSVFKDEATVRMAVQDAVDALMQKAFNSSSFNSNTFL 83
>d1fo0a_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 115
Score = 26.4 bits (57), Expect = 1.1
Identities = 8/32 (25%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPSIM-WRR 86
T + I V E + V+M C + W +
Sbjct: 5 TQTSISVMEKTTVTMDCVYETQDSSYFLFWYK 36
>d1hxma1 b.1.1.1 (A:1-120) T-cell antigen receptor {Human (Homo
sapiens), gamma-chain [TaxId: 9606]}
Length = 120
Score = 26.0 bits (56), Expect = 1.2
Identities = 6/23 (26%), Positives = 10/23 (43%)
Query: 55 PTSSDIMVREGSNVSMRCAASGS 77
P + V G ++RC+ G
Sbjct: 6 PEHQTVPVSIGVPATLRCSMKGE 28
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 25.6 bits (55), Expect = 1.2
Identities = 5/24 (20%), Positives = 7/24 (29%)
Query: 2 TEVSREHMGAYLCIASNGVPPSVS 25
V G Y C + +V
Sbjct: 65 RSVQLHDSGNYSCYRAGRPAGTVH 88
>d1xjua_ d.2.1.3 (A:) Endolysin Lyz {Bacteriophage P1 [TaxId:
10678]}
Length = 158
Score = 26.3 bits (57), Expect = 1.2
Identities = 9/28 (32%), Positives = 11/28 (39%), Gaps = 6/28 (21%)
Query: 109 QLIGAHEGQQLVLECISEAYPKSVNYWT 136
+LIG EG C + Y WT
Sbjct: 8 ELIGNAEG------CRRDPYMCPAGVWT 29
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 26.1 bits (56), Expect = 1.2
Identities = 9/33 (27%), Positives = 14/33 (42%)
Query: 64 EGSNVSMRCAASGSPPPSIMWRREGGEMITNSF 96
E + + + G P PS+ W G + SF
Sbjct: 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSF 46
>d2gj6d1 b.1.1.1 (D:15-114) T-cell antigen receptor {Mouse (Mus
musculus), beta-chain [TaxId: 10090]}
Length = 94
Score = 25.6 bits (55), Expect = 1.4
Identities = 6/20 (30%), Positives = 8/20 (40%)
Query: 65 GSNVSMRCAASGSPPPSIMW 84
G+ S+ C S S W
Sbjct: 1 GAIASLNCTYSDRGSQSFFW 20
>d1lk3l1 b.1.1.1 (L:1-106) Immunoglobulin light chain kappa
variable domain, VL-kappa {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 106
Score = 25.4 bits (55), Expect = 1.7
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 62 VREGSNVSMRCAASGSPPPSIMW 84
V G +++ C AS S + W
Sbjct: 12 VSPGEKLTISCKASESVTSRMHW 34
>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor
{Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 25.3 bits (54), Expect = 1.9
Identities = 5/28 (17%), Positives = 11/28 (39%)
Query: 64 EGSNVSMRCAASGSPPPSIMWRREGGEM 91
+ + G+P P++ W G +
Sbjct: 15 SDHHWCIPFTVKGNPKPALQWFYNGAIL 42
>d1r31a2 d.179.1.1 (A:3-110,A:221-378) Substrate-binding domain of
HMG-CoA reductase {Pseudomonas mevalonii [TaxId: 32044]}
Length = 266
Score = 26.1 bits (57), Expect = 1.9
Identities = 18/69 (26%), Positives = 30/69 (43%), Gaps = 6/69 (8%)
Query: 61 MVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVPPIVKI-PSQLIGAHEGQQL 119
+V E ++ A+ + + R GG ++S V+I P QL A +
Sbjct: 77 LVVEEPSIVA-AASYMA----KLARANGGFTTSSSAPRLARAQVRITPQQLETAEFSGEA 131
Query: 120 VLECISEAY 128
V+E I +AY
Sbjct: 132 VIEGILDAY 140
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 25.4 bits (54), Expect = 2.1
Identities = 8/44 (18%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Query: 100 VPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTREKGDMI 143
PPI+ A G++ ++C + P K +++
Sbjct: 6 GPPIISSTQT-QHALHGEKGQIKCFIRSTPPPDRIAWSWKENVL 48
Score = 23.9 bits (50), Expect = 7.2
Identities = 8/62 (12%), Positives = 19/62 (30%), Gaps = 3/62 (4%)
Query: 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNNTVPPIVKIP 107
PP I ++ G ++C +PPP + ++ + +
Sbjct: 7 PPIIS---STQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETIST 63
Query: 108 SQ 109
+
Sbjct: 64 EE 65
>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 25.3 bits (54), Expect = 2.1
Identities = 8/51 (15%), Positives = 17/51 (33%), Gaps = 5/51 (9%)
Query: 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEMITNSFNN 98
PP ++ + G+PPP++ W G + + +
Sbjct: 5 PPRVVSLEEPE-----LRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIH 50
>d2esvd1 b.1.1.1 (D:4-116) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 110
Score = 25.2 bits (54), Expect = 2.2
Identities = 4/23 (17%), Positives = 8/23 (34%)
Query: 62 VREGSNVSMRCAASGSPPPSIMW 84
EG ++ C S ++
Sbjct: 10 CAEGRAANLPCNHSTISGNEYVY 32
>d1eaja_ b.1.1.1 (A:) Coxsackie virus and adenovirus receptor (Car),
domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 124
Score = 25.3 bits (54), Expect = 2.3
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIV 32
+T + +G Y C P +K+I L+V
Sbjct: 92 VTNLQLSDIGTYQCKVKKA-PGVANKKIHLVV 122
>d1kgcd1 b.1.1.1 (D:2-117) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 112
Score = 25.2 bits (54), Expect = 2.3
Identities = 8/30 (26%), Positives = 11/30 (36%), Gaps = 1/30 (3%)
Query: 58 SDIMVREGSNVSMRCAASG-SPPPSIMWRR 86
+ + E V + C S S I W R
Sbjct: 6 NSMESNEEEPVHLPCNHSTISGTDYIHWYR 35
>d1rzfl2 b.1.1.2 (L:109-210) Immunoglobulin light chain lambda
constant domain, CL-lambda {Human (Homo sapiens) [TaxId:
9606]}
Length = 102
Score = 24.9 bits (54), Expect = 2.5
Identities = 9/57 (15%), Positives = 22/57 (38%), Gaps = 4/57 (7%)
Query: 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIM--WRREGGEMITNSFNNTVPP 102
P + +P SS+ + + + ++ C S P ++ W+ + + T
Sbjct: 5 APSVTLFPPSSEEL--QANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSK 59
>d2qtia1 a.284.1.1 (A:8-72) Uncharacterized protein SO2176
{Shewanella oneidensis [TaxId: 70863]}
Length = 65
Score = 24.3 bits (53), Expect = 2.5
Identities = 11/45 (24%), Positives = 17/45 (37%), Gaps = 12/45 (26%)
Query: 89 GEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVN 133
G +T+ VP E +Q V E ++A +SV
Sbjct: 31 GNCVTHLLERKVPS------------ESRQAVAEQFAKALAQSVK 63
>d1vcaa2 b.1.1.4 (A:1-90) Vascular cell adhesion molecule-1
(VCAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 24.7 bits (52), Expect = 3.0
Identities = 9/35 (25%), Positives = 16/35 (45%)
Query: 57 SSDIMVREGSNVSMRCAASGSPPPSIMWRREGGEM 91
S + + G +VS+ C+ +G P WR +
Sbjct: 8 ESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSP 42
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 25.0 bits (53), Expect = 3.2
Identities = 6/37 (16%), Positives = 12/37 (32%), Gaps = 1/37 (2%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIVQCQYF 37
+ V G Y C + + L V+ ++
Sbjct: 85 IQNVRFSDEGGYTCFFRDHS-YQEEAAVELKVEDPFY 120
Score = 25.0 bits (53), Expect = 3.5
Identities = 7/34 (20%), Positives = 9/34 (26%)
Query: 104 VKIPSQLIGAHEGQQLVLECISEAYPKSVNYWTR 137
V P I A G + L C +
Sbjct: 5 VIGPGHPIRALVGDEAELPCRISPGKNATGMEVG 38
Score = 24.2 bits (51), Expect = 6.4
Identities = 5/30 (16%), Positives = 7/30 (23%)
Query: 57 SSDIMVREGSNVSMRCAASGSPPPSIMWRR 86
I G + C S + M
Sbjct: 9 GHPIRALVGDEAELPCRISPGKNATGMEVG 38
>d1sq2n_ b.1.1.1 (N:) Novel antigen receptor (against lysozyme)
{Nurse shark (Ginglymostoma cirratum) [TaxId: 7801]}
Length = 112
Score = 24.7 bits (53), Expect = 3.3
Identities = 3/22 (13%), Positives = 9/22 (40%)
Query: 56 TSSDIMVREGSNVSMRCAASGS 77
T + G ++++ C +
Sbjct: 5 TPRSVTKETGESLTINCVLRDA 26
>d1u3ha1 b.1.1.1 (A:2-116) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 110
Score = 24.8 bits (53), Expect = 3.3
Identities = 6/30 (20%), Positives = 10/30 (33%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPSIMWR 85
+ + V EG + C+ S W
Sbjct: 5 SPQSLTVWEGETAILNCSYENSAFDYFPWY 34
>d1ymmd1 b.1.1.1 (D:9-104) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 96
Score = 24.4 bits (52), Expect = 3.4
Identities = 8/25 (32%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Query: 62 VREGSNVSMRCAASGSPPPSIMWRR 86
++EG N +M C+ S ++ W R
Sbjct: 5 IQEGENATMNCSYKTS-INNLQWYR 28
>d2g5ra1 b.1.1.1 (A:24-144) N-terminal domain of sialic acid
binding Ig-like lectin 7 (SIGLEC-7, p75/AIRM1) {Human
(Homo sapiens) [TaxId: 9606]}
Length = 121
Score = 24.8 bits (53), Expect = 3.5
Identities = 8/26 (30%), Positives = 12/26 (46%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPS 81
S + V+EG V +RC+ S
Sbjct: 7 MQSSVTVQEGMCVHVRCSFSYPVDSQ 32
>d1olza1 b.1.1.4 (A:537-628) Semaphorin 4d Ig-like domain {Human
(Homo sapiens) [TaxId: 9606]}
Length = 92
Score = 24.6 bits (52), Expect = 3.6
Identities = 5/20 (25%), Positives = 9/20 (45%)
Query: 1 MTEVSREHMGAYLCIASNGV 20
+ +S G Y C++ V
Sbjct: 54 IFNLSEGDSGVYQCLSEERV 73
>d1bd2d1 b.1.1.1 (D:1-117) T-cell antigen receptor {Human (Homo
sapiens), alpha-chain [TaxId: 9606]}
Length = 111
Score = 24.8 bits (53), Expect = 3.7
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPSIMW 84
S + V+EG + C + S +W
Sbjct: 6 NSPSLSVQEGRISILNCDYTNSMFDYFLW 34
>d1vesa_ b.1.1.1 (A:) Novel antigen receptor 12Y-2 {Spotted
wobbegong (Orectolobus maculatus) [TaxId: 168098]}
Length = 113
Score = 24.4 bits (52), Expect = 3.7
Identities = 3/22 (13%), Positives = 8/22 (36%)
Query: 56 TSSDIMVREGSNVSMRCAASGS 77
T G ++++ C +
Sbjct: 6 TPRTATKETGESLTINCVLRDA 27
>d1t7va1 b.1.1.2 (A:184-277) Zinc-alpha-2-glycoprotein, ZAG, alpha-3
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 24.2 bits (52), Expect = 4.2
Identities = 8/41 (19%), Positives = 12/41 (29%), Gaps = 2/41 (4%)
Query: 63 REGSNVSMRCAASGSPPPSIM--WRREGGEMITNSFNNTVP 101
G ++C A P I W R G + +
Sbjct: 13 APGEKKKLKCLAYDFYPGKIDVHWTRAGEVQEPELRGDVLH 53
>d1j8he1 b.1.1.1 (E:2-118) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 113
Score = 24.4 bits (52), Expect = 4.3
Identities = 7/31 (22%), Positives = 13/31 (41%), Gaps = 1/31 (3%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPSIMWRR 86
+S ++ R G V + C ++ W R
Sbjct: 6 SSRYLVKRTGEKVFLECVQDMD-HENMFWYR 35
>d1ucta2 b.1.1.4 (A:101-196) Ig alpha Fc receptor, FCARI (CD89)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 24.2 bits (52), Expect = 4.3
Identities = 8/42 (19%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Query: 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRREGG 89
P + ++ G N+S+ C+++ P +EG
Sbjct: 5 KPFLSADRGL---VLMPGENISLTCSSAHIPFDRFSLAKEGE 43
>d2cdeb1 b.1.1.1 (B:5-116) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 112
Score = 24.4 bits (52), Expect = 4.8
Identities = 3/22 (13%), Positives = 11/22 (50%)
Query: 56 TSSDIMVREGSNVSMRCAASGS 77
T +++ G +++ C+ +
Sbjct: 4 TPRYLVIGTGKKITLECSQTMG 25
>d1nezg_ b.1.1.1 (G:) CD8 {Mouse (Mus musculus) [TaxId: 10090]}
Length = 122
Score = 24.2 bits (52), Expect = 4.8
Identities = 8/38 (21%), Positives = 13/38 (34%), Gaps = 2/38 (5%)
Query: 49 PDILDYPTSSDIMVREGSNVSMRCAASGSPPPSIMWRR 86
P++ +P + G V + C GS W
Sbjct: 2 PELRIFPKK--MDAELGQKVDLVCEVLGSVSQGCSWLF 37
>d2nxyb1 b.1.1.1 (B:1001-1097) CD4 V-set domains {Human (Homo
sapiens) [TaxId: 9606]}
Length = 97
Score = 24.0 bits (51), Expect = 5.1
Identities = 6/27 (22%), Positives = 12/27 (44%)
Query: 60 IMVREGSNVSMRCAASGSPPPSIMWRR 86
++ ++G V + C AS W+
Sbjct: 4 VLGKKGDTVELTCTASQKKSIQFHWKN 30
>d1gsma1 b.1.1.4 (A:1-90) Mucosal addressin cell adhesion
molecule-1 (MADCAM-1) {Human (Homo sapiens) [TaxId:
9606]}
Length = 90
Score = 23.9 bits (50), Expect = 5.2
Identities = 7/32 (21%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 1 MTEVSREHMGAYLCIASNGVPPSVSKRIMLIV 32
+ S G +C+ S G + + L+V
Sbjct: 59 VRNASLSAAGTRVCVGSCGG-RTFQHTVQLLV 89
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 24.0 bits (51), Expect = 5.3
Identities = 3/40 (7%), Positives = 14/40 (35%), Gaps = 6/40 (15%)
Query: 62 VREGSNVSMRCA------ASGSPPPSIMWRREGGEMITNS 95
+ + + C + P + W ++ ++ ++
Sbjct: 11 LPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDN 50
>d2pv4a1 a.286.1.1 (A:1-144) Uncharacterized protein Sama2622
{Shewanella amazonensis [TaxId: 60478]}
Length = 144
Score = 24.5 bits (53), Expect = 5.4
Identities = 8/50 (16%), Positives = 20/50 (40%), Gaps = 2/50 (4%)
Query: 86 REGGEMITNSFNNTVPPIVKIPSQLIGAHEGQQLVLECISEAYPKSVNYW 135
R + + + V + ++P L+ A+ L E +++ + W
Sbjct: 9 RALAQQVADKVAGRVIALDRLPESLLTAYRS--LCDELLADRDGRFTRAW 56
>d2fcba1 b.1.1.4 (A:6-90) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 85
Score = 23.8 bits (50), Expect = 5.8
Identities = 6/27 (22%), Positives = 12/27 (44%)
Query: 58 SDIMVREGSNVSMRCAASGSPPPSIMW 84
I V + +V++ C + SP +
Sbjct: 12 QWINVLQEDSVTLTCRGTHSPESDSIQ 38
>d1mexl1 b.1.1.1 (L:1-107) Immunoglobulin light chain kappa
variable domain, VL-kappa {Mouse (Mus musculus),
cluster 4 [TaxId: 10090]}
Length = 107
Score = 23.9 bits (51), Expect = 6.0
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPSIMW 84
+ + G+ VS+ C AS + ++ W
Sbjct: 7 SQKFMSTSLGNRVSVTCKASQNVGTNVAW 35
>d1epfa1 b.1.1.4 (A:1-97) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 97
Score = 23.9 bits (50), Expect = 6.1
Identities = 4/29 (13%), Positives = 8/29 (27%)
Query: 58 SDIMVREGSNVSMRCAASGSPPPSIMWRR 86
S + G + C +G +
Sbjct: 8 SQGEISVGESKFFLCQVAGDAKDKDISWF 36
>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2
(ICAM-2) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 23.8 bits (50), Expect = 6.5
Identities = 8/41 (19%), Positives = 12/41 (29%), Gaps = 3/41 (7%)
Query: 101 PPIVKIPSQLIGAHEGQQLVLECI---SEAYPKSVNYWTRE 138
P V + Q G+ +EC E + R
Sbjct: 2 PRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRG 42
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 23.8 bits (50), Expect = 6.5
Identities = 7/32 (21%), Positives = 14/32 (43%), Gaps = 3/32 (9%)
Query: 58 SDIMVREGSNVSMRCAASGSP---PPSIMWRR 86
D V G +++ +G+ PP + W +
Sbjct: 12 QDGEVTVGGSITFSARVAGASLLKPPVVKWFK 43
>d3bp5a1 b.1.1.1 (A:1-114) Programmed cell death protein 1, PD1,
extracellular domain {Mouse (Mus musculus) [TaxId:
10090]}
Length = 114
Score = 23.9 bits (51), Expect = 6.6
Identities = 6/30 (20%), Positives = 13/30 (43%)
Query: 56 TSSDIMVREGSNVSMRCAASGSPPPSIMWR 85
+ + V EG+N + C+ S ++
Sbjct: 5 YPAWLTVSEGANATFTCSLSNWSEDLMLNW 34
>d1ogae1 b.1.1.1 (E:5-118) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 114
Score = 23.9 bits (51), Expect = 6.6
Identities = 5/22 (22%), Positives = 12/22 (54%)
Query: 56 TSSDIMVREGSNVSMRCAASGS 77
+ + +EG NV++ C + +
Sbjct: 5 SPKYLFRKEGQNVTLSCEQNLN 26
>d2bnub1 b.1.1.1 (B:2-113) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 112
Score = 23.9 bits (51), Expect = 7.1
Identities = 4/22 (18%), Positives = 13/22 (59%)
Query: 56 TSSDIMVREGSNVSMRCAASGS 77
T +++ G +++++CA +
Sbjct: 5 TPKFQVLKTGQSMTLQCAQDMN 26
>d2oz4a1 b.1.1.3 (A:283-366) Intercellular cell adhesion
molecule-1 (ICAM-1) {Human (Homo sapiens) [TaxId:
9606]}
Length = 84
Score = 23.3 bits (50), Expect = 7.2
Identities = 7/31 (22%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Query: 48 PPDILDYPTSSDIMVREGSNVSMRCAASGSP 78
P + + V EG+ V+++C A
Sbjct: 2 PAPNV---ILTKPEVSEGTEVTVKCEAHPRA 29
>d1h5ba_ b.1.1.1 (A:) T-cell antigen receptor {Mouse (Mus
musculus), alpha-chain [TaxId: 10090]}
Length = 113
Score = 23.6 bits (50), Expect = 7.2
Identities = 5/22 (22%), Positives = 14/22 (63%)
Query: 56 TSSDIMVREGSNVSMRCAASGS 77
+ S + + EG++ ++RC + +
Sbjct: 7 SPSALSLHEGTDSALRCNFTTT 28
>d2ntsp1 b.1.1.1 (P:3-118) T-cell antigen receptor {Human (Homo
sapiens), beta-chain [TaxId: 9606]}
Length = 113
Score = 23.6 bits (50), Expect = 8.4
Identities = 4/22 (18%), Positives = 9/22 (40%)
Query: 56 TSSDIMVREGSNVSMRCAASGS 77
T ++ G V++ C+
Sbjct: 5 TPRYLIKTRGQQVTLSCSPISG 26
>d1hxma2 b.1.1.2 (A:121-206) T-cell antigen receptor {Human (Homo
sapiens), gamma-chain [TaxId: 9606]}
Length = 86
Score = 23.1 bits (49), Expect = 8.5
Identities = 6/38 (15%), Positives = 9/38 (23%), Gaps = 4/38 (10%)
Query: 66 SNVSMRCAASGSPPPSIM--WRREGGEMITNSFNNTVP 101
+ ++ C P I IT V
Sbjct: 14 NGTNVACLVKEFYPKDIRINLVSSKK--ITEFDPAIVI 49
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.317 0.132 0.401
Gapped
Lambda K H
0.267 0.0491 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 575,620
Number of extensions: 24763
Number of successful extensions: 306
Number of sequences better than 10.0: 1
Number of HSP's gapped: 302
Number of HSP's successfully gapped: 184
Length of query: 151
Length of database: 2,407,596
Length adjustment: 78
Effective length of query: 73
Effective length of database: 1,336,656
Effective search space: 97575888
Effective search space used: 97575888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.2 bits)